WorldWideScience

Sample records for network analysis demonstrated

  1. Demonstration of UAV deployment and control of mobile wireless sensing networks for modal analysis of structures

    Science.gov (United States)

    Zhou, Hao; Hirose, Mitsuhito; Greenwood, William; Xiao, Yong; Lynch, Jerome; Zekkos, Dimitrios; Kamat, Vineet

    2016-04-01

    Unmanned aerial vehicles (UAVs) can serve as a powerful mobile sensing platform for assessing the health of civil infrastructure systems. To date, the majority of their uses have been dedicated to vision and laser-based spatial imaging using on-board cameras and LiDAR units, respectively. Comparatively less work has focused on integration of other sensing modalities relevant to structural monitoring applications. The overarching goal of this study is to explore the ability for UAVs to deploy a network of wireless sensors on structures for controlled vibration testing. The study develops a UAV platform with an integrated robotic gripper that can be used to install wireless sensors in structures, drop a heavy weight for the introduction of impact loads, and to uninstall wireless sensors for reinstallation elsewhere. A pose estimation algorithm is embedded in the UAV to estimate the location of the UAV during sensor placement and impact load introduction. The Martlet wireless sensor network architecture is integrated with the UAV to provide the UAV a mobile sensing capability. The UAV is programmed to command field deployed Martlets, aggregate and temporarily store data from the wireless sensor network, and to communicate data to a fixed base station on site. This study demonstrates the integrated UAV system using a simply supported beam in the lab with Martlet wireless sensors placed by the UAV and impact load testing performed. The study verifies the feasibility of the integrated UAV-wireless monitoring system architecture with accurate modal characteristics of the beam estimated by modal analysis.

  2. Edison Demonstration of Smallsat Networks

    Science.gov (United States)

    Westley, Deborah; Martinez, Andres; Petro, Andrew

    2015-01-01

    The goal of NASA's Edison Demonstration of Smallsat Networks (EDSN) mission is to demonstrate interactive satellite swarms capable of collecting, exchanging and transmitting multi-point scientific measurements. Satellite swarms enable a wide array of scientific, commercial and academic research not achievable with a single satellite. The EDSN satellites are scheduled to be launched into space as secondary payloads on the first flight of the Super Strypi launch vehicle no earlier than Oct. 29, 2015.

  3. Hardware demonstration of high-speed networks for satellite applications.

    Energy Technology Data Exchange (ETDEWEB)

    Donaldson, Jonathon W.; Lee, David S.

    2008-09-01

    This report documents the implementation results of a hardware demonstration utilizing the Serial RapidIO{trademark} and SpaceWire protocols that was funded by Sandia National Laboratories (SNL's) Laboratory Directed Research and Development (LDRD) office. This demonstration was one of the activities in the Modeling and Design of High-Speed Networks for Satellite Applications LDRD. This effort has demonstrated the transport of application layer packets across both RapidIO and SpaceWire networks to a common downlink destination using small topologies comprised of commercial-off-the-shelf and custom devices. The RapidFET and NEX-SRIO debug and verification tools were instrumental in the successful implementation of the RapidIO hardware demonstration. The SpaceWire hardware demonstration successfully demonstrated the transfer and routing of application data packets between multiple nodes and also was able reprogram remote nodes using configuration bitfiles transmitted over the network, a key feature proposed in node-based architectures (NBAs). Although a much larger network (at least 18 to 27 nodes) would be required to fully verify the design for use in a real-world application, this demonstration has shown that both RapidIO and SpaceWire are capable of routing application packets across a network to a common downlink node, illustrating their potential use in real-world NBAs.

  4. Introduction to Social Network Analysis

    Science.gov (United States)

    Zaphiris, Panayiotis; Ang, Chee Siang

    Social Network analysis focuses on patterns of relations between and among people, organizations, states, etc. It aims to describe networks of relations as fully as possible, identify prominent patterns in such networks, trace the flow of information through them, and discover what effects these relations and networks have on people and organizations. Social network analysis offers a very promising potential for analyzing human-human interactions in online communities (discussion boards, newsgroups, virtual organizations). This Tutorial provides an overview of this analytic technique and demonstrates how it can be used in Human Computer Interaction (HCI) research and practice, focusing especially on Computer Mediated Communication (CMC). This topic acquires particular importance these days, with the increasing popularity of social networking websites (e.g., youtube, myspace, MMORPGs etc.) and the research interest in studying them.

  5. Experimental demonstration of SCMA-OFDM for passive optical network

    Science.gov (United States)

    Lin, Bangjiang; Tang, Xuan; Shen, Xiaohuan; Zhang, Min; Lin, Chun; Ghassemlooy, Zabih

    2017-12-01

    We introduces a novel architecture for next generation passive optical network (PON) based on the employment of sparse code multiple access (SCMA) combined with orthogonal frequency division multiplexing (OFDM) modulation, in which the binary data is directly encoded to multi-dimensional codewords and then spread over OFDM subcarriers. The feasibility of SCMA-OFDM-PON is verified with experimental demonstration. We show that the SCMA-OFDM offers 150% overloading gain in the number of optical network units compared with the orthogonal frequency division multiplexing access.

  6. Secure, Mobile, Wireless Network Technology Designed, Developed, and Demonstrated

    Science.gov (United States)

    Ivancic, William D.; Paulsen, Phillip E.

    2004-01-01

    The inability to seamlessly disseminate data securely over a high-integrity, wireless broadband network has been identified as a primary technical barrier to providing an order-of-magnitude increase in aviation capacity and safety. Secure, autonomous communications to and from aircraft will enable advanced, automated, data-intensive air traffic management concepts, increase National Air Space (NAS) capacity, and potentially reduce the overall cost of air travel operations. For the first time ever, secure, mobile, network technology was designed, developed, and demonstrated with state-ofthe- art protocols and applications by a diverse, cooperative Government-industry team led by the NASA Glenn Research Center. This revolutionary technology solution will make fundamentally new airplane system capabilities possible by enabling secure, seamless network connections from platforms in motion (e.g., cars, ships, aircraft, and satellites) to existing terrestrial systems without the need for manual reconfiguration. Called Mobile Router, the new technology autonomously connects and configures networks as they traverse from one operating theater to another. The Mobile Router demonstration aboard the Neah Bay, a U.S. Coast Guard vessel stationed in Cleveland, Ohio, accomplished secure, seamless interoperability of mobile network systems across multiple domains without manual system reconfiguration. The Neah Bay was chosen because of its low cost and communications mission similarity to low-Earth-orbiting satellite platforms. This technology was successfully advanced from technology readiness level (TRL) 2 (concept and/or application formation) to TRL 6 (system model or prototype demonstration in a relevant environment). The secure, seamless interoperability offered by the Mobile Router and encryption device will enable several new, vehicle-specific and systemwide technologies to perform such things as remote, autonomous aircraft performance monitoring and early detection and

  7. Network analysis applications in hydrology

    Science.gov (United States)

    Price, Katie

    2017-04-01

    Applied network theory has seen pronounced expansion in recent years, in fields such as epidemiology, computer science, and sociology. Concurrent development of analytical methods and frameworks has increased possibilities and tools available to researchers seeking to apply network theory to a variety of problems. While water and nutrient fluxes through stream systems clearly demonstrate a directional network structure, the hydrological applications of network theory remain under­explored. This presentation covers a review of network applications in hydrology, followed by an overview of promising network analytical tools that potentially offer new insights into conceptual modeling of hydrologic systems, identifying behavioral transition zones in stream networks and thresholds of dynamical system response. Network applications were tested along an urbanization gradient in Atlanta, Georgia, USA. Peachtree Creek and Proctor Creek. Peachtree Creek contains a nest of five long­term USGS streamflow and water quality gages, allowing network application of long­term flow statistics. The watershed spans a range of suburban and heavily urbanized conditions. Summary flow statistics and water quality metrics were analyzed using a suite of network analysis techniques, to test the conceptual modeling and predictive potential of the methodologies. Storm events and low flow dynamics during Summer 2016 were analyzed using multiple network approaches, with an emphasis on tomogravity methods. Results indicate that network theory approaches offer novel perspectives for understanding long­ term and event­based hydrological data. Key future directions for network applications include 1) optimizing data collection, 2) identifying "hotspots" of contaminant and overland flow influx to stream systems, 3) defining process domains, and 4) analyzing dynamic connectivity of various system components, including groundwater­surface water interactions.

  8. Unraveling protein networks with power graph analysis.

    Science.gov (United States)

    Royer, Loïc; Reimann, Matthias; Andreopoulos, Bill; Schroeder, Michael

    2008-07-11

    Networks play a crucial role in computational biology, yet their analysis and representation is still an open problem. Power Graph Analysis is a lossless transformation of biological networks into a compact, less redundant representation, exploiting the abundance of cliques and bicliques as elementary topological motifs. We demonstrate with five examples the advantages of Power Graph Analysis. Investigating protein-protein interaction networks, we show how the catalytic subunits of the casein kinase II complex are distinguishable from the regulatory subunits, how interaction profiles and sequence phylogeny of SH3 domains correlate, and how false positive interactions among high-throughput interactions are spotted. Additionally, we demonstrate the generality of Power Graph Analysis by applying it to two other types of networks. We show how power graphs induce a clustering of both transcription factors and target genes in bipartite transcription networks, and how the erosion of a phosphatase domain in type 22 non-receptor tyrosine phosphatases is detected. We apply Power Graph Analysis to high-throughput protein interaction networks and show that up to 85% (56% on average) of the information is redundant. Experimental networks are more compressible than rewired ones of same degree distribution, indicating that experimental networks are rich in cliques and bicliques. Power Graphs are a novel representation of networks, which reduces network complexity by explicitly representing re-occurring network motifs. Power Graphs compress up to 85% of the edges in protein interaction networks and are applicable to all types of networks such as protein interactions, regulatory networks, or homology networks.

  9. Network science quantification of resilience demonstrated on the Indian Railways Network

    CERN Document Server

    Bhatia, Udit; Kodra, Evan; Ganguly, Auroop R

    2015-01-01

    The structure, interdependence, and fragility of systems ranging from power grids and transportation to ecology, climate, biology and even human communities and the Internet, have been examined through network science. While the response to perturbations has been quantified, recovery strategies for perturbed networks have usually been either discussed conceptually or through anecdotal case studies. Here we develop a network science-based quantitative methods framework for measuring, comparing and interpreting hazard responses and as well as recovery strategies. The framework, motivated by the recently proposed temporal resilience paradigm, is demonstrated with the Indian Railways Network. The methods are demonstrated through the resilience of the network to natural or human-induced hazards and electric grid failure. Simulations inspired by the 2004 Indian Ocean Tsunami and the 2012 North Indian blackout as well as a cyber-physical attack scenario. Multiple metrics are used to generate various recovery strateg...

  10. Environmental analysis for pipeline gas demonstration plants

    Energy Technology Data Exchange (ETDEWEB)

    Stinton, L.H.

    1978-09-01

    The Department of Energy (DOE) has implemented programs for encouraging the development and commercialization of coal-related technologies, which include coal gasification demonstration-scale activities. In support of commercialization activities the Environmental Analysis for Pipeline Gas Demonstration Plants has been prepared as a reference document to be used in evaluating potential environmental and socioeconomic effects from construction and operation of site- and process-specific projects. Effluents and associated impacts are identified for six coal gasification processes at three contrasting settings. In general, impacts from construction of a high-Btu gas demonstration plant are similar to those caused by the construction of any chemical plant of similar size. The operation of a high-Btu gas demonstration plant, however, has several unique aspects that differentiate it from other chemical plants. Offsite development (surface mining) and disposal of large quantities of waste solids constitute important sources of potential impact. In addition, air emissions require monitoring for trace metals, polycyclic aromatic hydrocarbons, phenols, and other emissions. Potential biological impacts from long-term exposure to these emissions are unknown, and additional research and data analysis may be necessary to determine such effects. Possible effects of pollutants on vegetation and human populations are discussed. The occurrence of chemical contaminants in liquid effluents and the bioaccumulation of these contaminants in aquatic organisms may lead to adverse ecological impact. Socioeconomic impacts are similar to those from a chemical plant of equivalent size and are summarized and contrasted for the three surrogate sites.

  11. Social network analysis

    NARCIS (Netherlands)

    de Nooy, W.; Crothers, C.

    2009-01-01

    Social network analysis (SNA) focuses on the structure of ties within a set of social actors, e.g., persons, groups, organizations, and nations, or the products of human activity or cognition such as web sites, semantic concepts, and so on. It is linked to structuralism in sociology stressing the

  12. Google matrix analysis of directed networks

    Science.gov (United States)

    Ermann, Leonardo; Frahm, Klaus M.; Shepelyansky, Dima L.

    2015-10-01

    In the past decade modern societies have developed enormous communication and social networks. Their classification and information retrieval processing has become a formidable task for the society. Because of the rapid growth of the World Wide Web, and social and communication networks, new mathematical methods have been invented to characterize the properties of these networks in a more detailed and precise way. Various search engines extensively use such methods. It is highly important to develop new tools to classify and rank a massive amount of network information in a way that is adapted to internal network structures and characteristics. This review describes the Google matrix analysis of directed complex networks demonstrating its efficiency using various examples including the World Wide Web, Wikipedia, software architectures, world trade, social and citation networks, brain neural networks, DNA sequences, and Ulam networks. The analytical and numerical matrix methods used in this analysis originate from the fields of Markov chains, quantum chaos, and random matrix theory.

  13. Network performance analysis

    CERN Document Server

    Bonald, Thomas

    2013-01-01

    The book presents some key mathematical tools for the performance analysis of communication networks and computer systems.Communication networks and computer systems have become extremely complex. The statistical resource sharing induced by the random behavior of users and the underlying protocols and algorithms may affect Quality of Service.This book introduces the main results of queuing theory that are useful for analyzing the performance of these systems. These mathematical tools are key to the development of robust dimensioning rules and engineering methods. A number of examples i

  14. Network systems security analysis

    Science.gov (United States)

    Yilmaz, Ä.°smail

    2015-05-01

    Network Systems Security Analysis has utmost importance in today's world. Many companies, like banks which give priority to data management, test their own data security systems with "Penetration Tests" by time to time. In this context, companies must also test their own network/server systems and take precautions, as the data security draws attention. Based on this idea, the study cyber-attacks are researched throughoutly and Penetration Test technics are examined. With these information on, classification is made for the cyber-attacks and later network systems' security is tested systematically. After the testing period, all data is reported and filed for future reference. Consequently, it is found out that human beings are the weakest circle of the chain and simple mistakes may unintentionally cause huge problems. Thus, it is clear that some precautions must be taken to avoid such threats like updating the security software.

  15. Review Essay: Does Qualitative Network Analysis Exist?

    Directory of Open Access Journals (Sweden)

    Rainer Diaz-Bone

    2007-01-01

    Full Text Available Social network analysis was formed and established in the 1970s as a way of analyzing systems of social relations. In this review the theoretical-methodological standpoint of social network analysis ("structural analysis" is introduced and the different forms of social network analysis are presented. Structural analysis argues that social actors and social relations are embedded in social networks, meaning that action and perception of actors as well as the performance of social relations are influenced by the network structure. Since the 1990s structural analysis has integrated concepts such as agency, discourse and symbolic orientation and in this way structural analysis has opened itself. Since then there has been increasing use of qualitative methods in network analysis. They are used to include the perspective of the analyzed actors, to explore networks, and to understand network dynamics. In the reviewed book, edited by Betina HOLLSTEIN and Florian STRAUS, the twenty predominantly empirically orientated contributions demonstrate the possibilities of combining quantitative and qualitative methods in network analyses in different research fields. In this review we examine how the contributions succeed in applying and developing the structural analysis perspective, and the self-positioning of "qualitative network analysis" is evaluated. URN: urn:nbn:de:0114-fqs0701287

  16. Analysis of computer networks

    CERN Document Server

    Gebali, Fayez

    2015-01-01

    This textbook presents the mathematical theory and techniques necessary for analyzing and modeling high-performance global networks, such as the Internet. The three main building blocks of high-performance networks are links, switching equipment connecting the links together, and software employed at the end nodes and intermediate switches. This book provides the basic techniques for modeling and analyzing these last two components. Topics covered include, but are not limited to: Markov chains and queuing analysis, traffic modeling, interconnection networks and switch architectures and buffering strategies.   ·         Provides techniques for modeling and analysis of network software and switching equipment; ·         Discusses design options used to build efficient switching equipment; ·         Includes many worked examples of the application of discrete-time Markov chains to communication systems; ·         Covers the mathematical theory and techniques necessary for ana...

  17. Network Science Based Quantification of Resilience Demonstrated on the Indian Railways Network.

    Science.gov (United States)

    Bhatia, Udit; Kumar, Devashish; Kodra, Evan; Ganguly, Auroop R

    2015-01-01

    The structure, interdependence, and fragility of systems ranging from power-grids and transportation to ecology, climate, biology and even human communities and the Internet have been examined through network science. While response to perturbations has been quantified, recovery strategies for perturbed networks have usually been either discussed conceptually or through anecdotal case studies. Here we develop a network science based quantitative framework for measuring, comparing and interpreting hazard responses as well as recovery strategies. The framework, motivated by the recently proposed temporal resilience paradigm, is demonstrated with the Indian Railways Network. Simulations inspired by the 2004 Indian Ocean Tsunami and the 2012 North Indian blackout as well as a cyber-physical attack scenario illustrate hazard responses and effectiveness of proposed recovery strategies. Multiple metrics are used to generate various recovery strategies, which are simply sequences in which system components should be recovered after a disruption. Quantitative evaluation of these strategies suggests that faster and more efficient recovery is possible through network centrality measures. Optimal recovery strategies may be different per hazard, per community within a network, and for different measures of partial recovery. In addition, topological characterization provides a means for interpreting the comparative performance of proposed recovery strategies. The methods can be directly extended to other Large-Scale Critical Lifeline Infrastructure Networks including transportation, water, energy and communications systems that are threatened by natural or human-induced hazards, including cascading failures. Furthermore, the quantitative framework developed here can generalize across natural, engineered and human systems, offering an actionable and generalizable approach for emergency management in particular as well as for network resilience in general.

  18. Network Science Based Quantification of Resilience Demonstrated on the Indian Railways Network.

    Directory of Open Access Journals (Sweden)

    Udit Bhatia

    Full Text Available The structure, interdependence, and fragility of systems ranging from power-grids and transportation to ecology, climate, biology and even human communities and the Internet have been examined through network science. While response to perturbations has been quantified, recovery strategies for perturbed networks have usually been either discussed conceptually or through anecdotal case studies. Here we develop a network science based quantitative framework for measuring, comparing and interpreting hazard responses as well as recovery strategies. The framework, motivated by the recently proposed temporal resilience paradigm, is demonstrated with the Indian Railways Network. Simulations inspired by the 2004 Indian Ocean Tsunami and the 2012 North Indian blackout as well as a cyber-physical attack scenario illustrate hazard responses and effectiveness of proposed recovery strategies. Multiple metrics are used to generate various recovery strategies, which are simply sequences in which system components should be recovered after a disruption. Quantitative evaluation of these strategies suggests that faster and more efficient recovery is possible through network centrality measures. Optimal recovery strategies may be different per hazard, per community within a network, and for different measures of partial recovery. In addition, topological characterization provides a means for interpreting the comparative performance of proposed recovery strategies. The methods can be directly extended to other Large-Scale Critical Lifeline Infrastructure Networks including transportation, water, energy and communications systems that are threatened by natural or human-induced hazards, including cascading failures. Furthermore, the quantitative framework developed here can generalize across natural, engineered and human systems, offering an actionable and generalizable approach for emergency management in particular as well as for network resilience in general.

  19. Understanding complex interactions using social network analysis.

    Science.gov (United States)

    Pow, Janette; Gayen, Kaberi; Elliott, Lawrie; Raeside, Robert

    2012-10-01

    The aim of this paper is to raise the awareness of social network analysis as a method to facilitate research in nursing research. The application of social network analysis in assessing network properties has allowed greater insight to be gained in many areas including sociology, politics, business organisation and health care. However, the use of social networks in nursing has not received sufficient attention. Review of literature and illustration of the application of the method of social network analysis using research examples. First, the value of social networks will be discussed. Then by using illustrative examples, the value of social network analysis to nursing will be demonstrated. The method of social network analysis is found to give greater insights into social situations involving interactions between individuals and has particular application to the study of interactions between nurses and between nurses and patients and other actors. Social networks are systems in which people interact. Two quantitative techniques help our understanding of these networks. The first is visualisation of the network. The second is centrality. Individuals with high centrality are key communicators in a network. Applying social network analysis to nursing provides a simple method that helps gain an understanding of human interaction and how this might influence various health outcomes. It allows influential individuals (actors) to be identified. Their influence on the formation of social norms and communication can determine the extent to which new interventions or ways of thinking are accepted by a group. Thus, working with key individuals in a network could be critical to the success and sustainability of an intervention. Social network analysis can also help to assess the effectiveness of such interventions for the recipient and the service provider. © 2012 Blackwell Publishing Ltd.

  20. Equivalence of ELISpot assays demonstrated between major HIV network laboratories.

    Directory of Open Access Journals (Sweden)

    Dilbinder K Gill

    2010-12-01

    Full Text Available The Comprehensive T Cell Vaccine Immune Monitoring Consortium (CTC-VIMC was created to provide standardized immunogenicity monitoring services for HIV vaccine trials. The ex vivo interferon-gamma (IFN-γ ELISpot is used extensively as a primary immunogenicity assay to assess T cell-based vaccine candidates in trials for infectious diseases and cancer. Two independent, GCLP-accredited central laboratories of CTC-VIMC routinely use their own standard operating procedures (SOPs for ELISpot within two major networks of HIV vaccine trials. Studies are imperatively needed to assess the comparability of ELISpot measurements across laboratories to benefit optimal advancement of vaccine candidates.We describe an equivalence study of the two independently qualified IFN-g ELISpot SOPs. The study design, data collection and subsequent analysis were managed by independent statisticians to avoid subjectivity. The equivalence of both response rates and positivity calls to a given stimulus was assessed based on pre-specified acceptance criteria derived from a separate pilot study.Detection of positive responses was found to be equivalent between both laboratories. The 95% C.I. on the difference in response rates, for CMV (-1.5%, 1.5% and CEF (-0.4%, 7.8% responses, were both contained in the pre-specified equivalence margin of interval [-15%, 15%]. The lower bound of the 95% C.I. on the proportion of concordant positivity calls for CMV (97.2% and CEF (89.5% were both greater than the pre-specified margin of 70%. A third CTC-VIMC central laboratory already using one of the two SOPs also showed comparability when tested in a smaller sub-study.The described study procedure provides a prototypical example for the comparison of bioanalytical methods in HIV vaccine and other disease fields. This study also provides valuable and unprecedented information for future vaccine candidate evaluations on the comparison and pooling of ELISpot results generated by the CTC

  1. Space Networking Demonstrated for Distributed Human-Robotic Planetary Exploration

    Science.gov (United States)

    Bizon, Thomas P.; Seibert, Marc A.

    2003-01-01

    Communications and networking experts from the NASA Glenn Research Center designed and implemented an innovative communications infrastructure for a simulated human-robotic planetary mission. The mission, which was executed in the Arizona desert during the first 2 weeks of September 2002, involved a diverse team of researchers from several NASA centers and academic institutions.

  2. Structural Analysis of Complex Networks

    CERN Document Server

    Dehmer, Matthias

    2011-01-01

    Filling a gap in literature, this self-contained book presents theoretical and application-oriented results that allow for a structural exploration of complex networks. The work focuses not only on classical graph-theoretic methods, but also demonstrates the usefulness of structural graph theory as a tool for solving interdisciplinary problems. Applications to biology, chemistry, linguistics, and data analysis are emphasized. The book is suitable for a broad, interdisciplinary readership of researchers, practitioners, and graduate students in discrete mathematics, statistics, computer science,

  3. Multidimensional Analysis of Linguistic Networks

    Science.gov (United States)

    Araújo, Tanya; Banisch, Sven

    Network-based approaches play an increasingly important role in the analysis of data even in systems in which a network representation is not immediately apparent. This is particularly true for linguistic networks, which use to be induced from a linguistic data set for which a network perspective is only one out of several options for representation. Here we introduce a multidimensional framework for network construction and analysis with special focus on linguistic networks. Such a framework is used to show that the higher is the abstraction level of network induction, the harder is the interpretation of the topological indicators used in network analysis. Several examples are provided allowing for the comparison of different linguistic networks as well as to networks in other fields of application of network theory. The computation and the intelligibility of some statistical indicators frequently used in linguistic networks are discussed. It suggests that the field of linguistic networks, by applying statistical tools inspired by network studies in other domains, may, in its current state, have only a limited contribution to the development of linguistic theory.

  4. Experimental demonstration of IDMA-OFDM for passive optical network

    Science.gov (United States)

    Lin, Bangjiang; Tang, Xuan; Li, Yiwei; Zhang, Min; Lin, Chun; Ghassemlooy, Zabih

    2017-11-01

    We present interleave division multiple access (IDMA) scheme combined with orthogonal frequency division multiplexing (OFDM) for passive optical network, which offers improved transmission performance and good chromatic dispersion tolerance. The interleavers are employed to separate different users and the generated chips are modulated on OFDM subcarriers. The feasibility of IDMA-OFDM-PON is experimentally verified with a bitrate of 3.3 Gb/s per user. Compared with OFDMA, IDMA-OFDM offers 8 and 6 dB gains in term of receiver sensitivity in the cases of 2 and 4 users, respectively.

  5. Network Analysis, Architecture, and Design

    CERN Document Server

    McCabe, James D

    2007-01-01

    Traditionally, networking has had little or no basis in analysis or architectural development, with designers relying on technologies they are most familiar with or being influenced by vendors or consultants. However, the landscape of networking has changed so that network services have now become one of the most important factors to the success of many third generation networks. It has become an important feature of the designer's job to define the problems that exist in his network, choose and analyze several optimization parameters during the analysis process, and then prioritize and evalua

  6. Network topology analysis.

    Energy Technology Data Exchange (ETDEWEB)

    Kalb, Jeffrey L.; Lee, David S.

    2008-01-01

    Emerging high-bandwidth, low-latency network technology has made network-based architectures both feasible and potentially desirable for use in satellite payload architectures. The selection of network topology is a critical component when developing these multi-node or multi-point architectures. This study examines network topologies and their effect on overall network performance. Numerous topologies were reviewed against a number of performance, reliability, and cost metrics. This document identifies a handful of good network topologies for satellite applications and the metrics used to justify them as such. Since often multiple topologies will meet the requirements of the satellite payload architecture under development, the choice of network topology is not easy, and in the end the choice of topology is influenced by both the design characteristics and requirements of the overall system and the experience of the developer.

  7. Tourism Destinations Network Analysis, Social Network Analysis Approach

    Directory of Open Access Journals (Sweden)

    2015-09-01

    Full Text Available The tourism industry is becoming one of the world's largest economical sources, and is expected to become the world's first industry by 2020. Previous studies have focused on several aspects of this industry including sociology, geography, tourism management and development, but have paid less attention to analytical and quantitative approaches. This study introduces some network analysis techniques and measures aiming at studying the structural characteristics of tourism networks. More specifically, it presents a methodology to analyze tourism destinations network. We apply the methodology to analyze mazandaran’s Tourism destination network, one of the most famous tourism areas of Iran.

  8. Ensemble approach to the analysis of weighted networks

    Science.gov (United States)

    Ahnert, S. E.; Garlaschelli, D.; Fink, T. M. A.; Caldarelli, G.

    2007-07-01

    We present an approach to the analysis of weighted networks, by providing a straightforward generalization of any network measure defined on unweighted networks, such as the average degree of the nearest neighbors, the clustering coefficient, the “betweenness,” the distance between two nodes, and the diameter of a network. All these measures are well established for unweighted networks but have hitherto proven difficult to define for weighted networks. Our approach is based on the translation of a weighted network into an ensemble of edges. Further introducing this approach we demonstrate its advantages by applying the clustering coefficient constructed in this way to two real-world weighted networks.

  9. Applications of social media and social network analysis

    CERN Document Server

    Kazienko, Przemyslaw

    2015-01-01

    This collection of contributed chapters demonstrates a wide range of applications within two overlapping research domains: social media analysis and social network analysis. Various methodologies were utilized in the twelve individual chapters including static, dynamic and real-time approaches to graph, textual and multimedia data analysis. The topics apply to reputation computation, emotion detection, topic evolution, rumor propagation, evaluation of textual opinions, friend ranking, analysis of public transportation networks, diffusion in dynamic networks, analysis of contributors to commun

  10. Social Network Analysis with sna

    Directory of Open Access Journals (Sweden)

    Carter T. Butts

    2007-12-01

    Full Text Available Modern social network analysis---the analysis of relational data arising from social systems---is a computationally intensive area of research. Here, we provide an overview of a software package which provides support for a range of network analytic functionality within the R statistical computing environment. General categories of currently supported functionality are described, and brief examples of package syntax and usage are shown.

  11. Computational Social Network Analysis

    CERN Document Server

    Hassanien, Aboul-Ella

    2010-01-01

    Presents insight into the social behaviour of animals (including the study of animal tracks and learning by members of the same species). This book provides web-based evidence of social interaction, perceptual learning, information granulation and the behaviour of humans and affinities between web-based social networks

  12. Direct2Experts: a pilot national network to demonstrate interoperability among research-networking platforms

    Science.gov (United States)

    Barnett, William; Conlon, Mike; Eichmann, David; Kibbe, Warren; Falk-Krzesinski, Holly; Halaas, Michael; Johnson, Layne; Meeks, Eric; Mitchell, Donald; Schleyer, Titus; Stallings, Sarah; Warden, Michael; Kahlon, Maninder

    2011-01-01

    Research-networking tools use data-mining and social networking to enable expertise discovery, matchmaking and collaboration, which are important facets of team science and translational research. Several commercial and academic platforms have been built, and many institutions have deployed these products to help their investigators find local collaborators. Recent studies, though, have shown the growing importance of multiuniversity teams in science. Unfortunately, the lack of a standard data-exchange model and resistance of universities to share information about their faculty have presented barriers to forming an institutionally supported national network. This case report describes an initiative, which, in only 6 months, achieved interoperability among seven major research-networking products at 28 universities by taking an approach that focused on addressing institutional concerns and encouraging their participation. With this necessary groundwork in place, the second phase of this effort can begin, which will expand the network's functionality and focus on the end users. PMID:22037890

  13. Waste Energy Recovery from Natural Gas Distribution Network: CELSIUS Project Demonstrator in Genoa

    Directory of Open Access Journals (Sweden)

    Davide Borelli

    2015-12-01

    Full Text Available Increasing energy efficiency by the smart recovery of waste energy is the scope of the CELSIUS Project (Combined Efficient Large Scale Integrated Urban Systems. The CELSIUS consortium includes a world-leading partnership of outstanding research, innovation and implementation organizations, and gather competence and excellence from five European cities with complementary baseline positions regarding the sustainable use of energy: Cologne, Genoa, Gothenburg, London, and Rotterdam. Lasting four-years and coordinated by the City of Gothenburg, the project faces with an holistic approach technical, economic, administrative, social, legal and political issues concerning smart district heating and cooling, aiming to establish best practice solutions. This will be done through the implementation of twelve new high-reaching demonstration projects, which cover the most major aspects of innovative urban heating and cooling for a smart city. The Genoa demonstrator was designed in order to recover energy from the pressure drop between the main supply line and the city natural gas network. The potential mechanical energy is converted to electricity by a turboexpander/generator system, which has been integrated in a combined heat and power plant to supply a district heating network. The performed energy analysis assessed natural gas saving and greenhouse gas reduction achieved through the smart systems integration.

  14. Topological analysis of telecommunications networks

    Directory of Open Access Journals (Sweden)

    Milojko V. Jevtović

    2011-01-01

    Full Text Available A topological analysis of the structure of telecommunications networks is a very interesting topic in the network research, but also a key issue in their design and planning. Satisfying multiple criteria in terms of locations of switching nodes as well as their connectivity with respect to the requests for capacity, transmission speed, reliability, availability and cost are the main research objectives. There are three ways of presenting the topology of telecommunications networks: table, matrix or graph method. The table method is suitable for a network of a relatively small number of nodes in relation to the number of links. The matrix method involves the formation of a connection matrix in which its columns present source traffic nodes and its rows are the switching systems that belong to the destination. The method of the topology graph means that the network nodes are connected via directional or unidirectional links. We can thus easily analyze the structural parameters of telecommunications networks. This paper presents the mathematical analysis of the star-, ring-, fully connected loop- and grid (matrix-shaped topology as well as the topology based on the shortest path tree. For each of these topologies, the expressions for determining the number of branches, the middle level of reliability, the medium length and the average length of the link are given in tables. For the fully connected loop network with five nodes the values of all topological parameters are calculated. Based on the topological parameters, the relationships that represent integral and distributed indicators of reliability are given in this work as well as the values of the particular network. The main objectives of the topology optimization of telecommunications networks are: achieving the minimum complexity, maximum capacity, the shortest path message transfer, the maximum speed of communication and maximum economy. The performance of telecommunications networks is

  15. Experimental demonstration of interference avoidance protocol (transmission scheduling) in O-CDMA networks.

    Science.gov (United States)

    Saghari, Poorya; Kamath, P; Arbab, Vahid R; Haghi, Mahta; Willner, Alan E; Bannister, Joe A; Touch, Joe D

    2007-12-10

    We experimentally demonstrate a transmission scheduling algorithm to avoid congestion collapse in O-CDMA networks. Our result shows that transmission scheduling increases the performance of the system by orders of magnitude.

  16. Kinetic analysis of complex metabolic networks

    Energy Technology Data Exchange (ETDEWEB)

    Stephanopoulos, G. [MIT, Cambridge, MA (United States)

    1996-12-31

    A new methodology is presented for the analysis of complex metabolic networks with the goal of metabolite overproduction. The objective is to locate a small number of reaction steps in a network that have maximum impact on network flux amplification and whose rate can also be increased without functional network derangement. This method extends the concepts of Metabolic Control Analysis to groups of reactions and offers the means for calculating group control coefficients as measures of the control exercised by groups of reactions on the overall network fluxes and intracellular metabolite pools. It is further demonstrated that the optimal strategy for the effective increase of network fluxes, while maintaining an uninterrupted supply of intermediate metabolites, is through the coordinated amplification of multiple (as opposed to a single) reaction steps. Satisfying this requirement invokes the concept of the concentration control to coefficient, which emerges as a critical parameter in the identification of feasible enzymatic modifications with maximal impact on the network flux. A case study of aromatic aminoacid production is provided to illustrate these concepts.

  17. Analysis of neural networks

    CERN Document Server

    Heiden, Uwe

    1980-01-01

    The purpose of this work is a unified and general treatment of activity in neural networks from a mathematical pOint of view. Possible applications of the theory presented are indica­ ted throughout the text. However, they are not explored in de­ tail for two reasons : first, the universal character of n- ral activity in nearly all animals requires some type of a general approach~ secondly, the mathematical perspicuity would suffer if too many experimental details and empirical peculiarities were interspersed among the mathematical investigation. A guide to many applications is supplied by the references concerning a variety of specific issues. Of course the theory does not aim at covering all individual problems. Moreover there are other approaches to neural network theory (see e.g. Poggio-Torre, 1978) based on the different lev­ els at which the nervous system may be viewed. The theory is a deterministic one reflecting the average be­ havior of neurons or neuron pools. In this respect the essay is writt...

  18. Statistical network analysis for analyzing policy networks

    DEFF Research Database (Denmark)

    Robins, Garry; Lewis, Jenny; Wang, Peng

    2012-01-01

    To analyze social network data using standard statistical approaches is to risk incorrect inference. The dependencies among observations implied in a network conceptualization undermine standard assumptions of the usual general linear models. One of the most quickly expanding areas of social...... and policy network methodology is the development of statistical modeling approaches that can accommodate such dependent data. In this article, we review three network statistical methods commonly used in the current literature: quadratic assignment procedures, exponential random graph models (ERGMs...

  19. Functional stoichiometric analysis of metabolic networks.

    Science.gov (United States)

    Urbanczik, R; Wagner, C

    2005-11-15

    An important tool in Systems Biology is the stoichiometric modeling of metabolic networks, where the stationary states of the network are described by a high-dimensional polyhedral cone, the so-called flux cone. Exhaustive descriptions of the metabolism can be obtained by computing the elementary vectors of this cone but, owing to a combinatorial explosion of the number of elementary vectors, this approach becomes computationally intractable for genome scale networks. Hence, we propose to instead focus on the conversion cone, a projection of the flux cone, which describes the interaction of the metabolism with its external chemical environment. We present a direct method for calculating the elementary vectors of this cone and, by studying the metabolism of Saccharomyces cerevisiae, we demonstrate that such an analysis is computationally feasible even for genome scale networks.

  20. Multifractal analysis of mobile social networks

    Science.gov (United States)

    Zheng, Wei; Zhang, Zifeng; Deng, Yufan

    2017-09-01

    As Wireless Fidelity (Wi-Fi)-enabled handheld devices have been widely used, the mobile social networks (MSNs) has been attracting extensive attention. Fractal approaches have also been widely applied to characterierize natural networks as useful tools to depict their spatial distribution and scaling properties. Moreover, when the complexity of the spatial distribution of MSNs cannot be properly charaterized by single fractal dimension, multifractal analysis is required. For further research, we introduced a multifractal analysis method based on box-covering algorithm to describe the structure of MSNs. Using this method, we find that the networks are multifractal at different time interval. The simulation results demonstrate that the proposed method is efficient for analyzing the multifractal characteristic of MSNs, which provides a distribution of singularities adequately describing both the heterogeneity of fractal patterns and the statistics of measurements across spatial scales in MSNs.

  1. NEAT : an efficient network enrichment analysis test

    NARCIS (Netherlands)

    Signorelli, Mirko; Vinciotti, Veronica; Wit, Ernst C

    2016-01-01

    BACKGROUND: Network enrichment analysis is a powerful method, which allows to integrate gene enrichment analysis with the information on relationships between genes that is provided by gene networks. Existing tests for network enrichment analysis deal only with undirected networks, they can be

  2. Experimental demonstration of software defined data center optical networks with Tbps end-to-end tunability

    Science.gov (United States)

    Zhao, Yongli; Zhang, Jie; Ji, Yuefeng; Li, Hui; Wang, Huitao; Ge, Chao

    2015-10-01

    The end-to-end tunability is important to provision elastic channel for the burst traffic of data center optical networks. Then, how to complete the end-to-end tunability based on elastic optical networks? Software defined networking (SDN) based end-to-end tunability solution is proposed for software defined data center optical networks, and the protocol extension and implementation procedure are designed accordingly. For the first time, the flexible grid all optical networks with Tbps end-to-end tunable transport and switch system have been online demonstrated for data center interconnection, which are controlled by OpenDayLight (ODL) based controller. The performance of the end-to-end tunable transport and switch system has been evaluated with wavelength number tuning, bit rate tuning, and transmit power tuning procedure.

  3. Albemarle Sound demonstration study of the national monitoring network for US coastal waters and their tributaries

    Science.gov (United States)

    Michelle Moorman; Sharon Fitzgerald; Keith Loftin; Elizabeth Fensin

    2016-01-01

    The U.S. Geological Survey’s (USGS) is implementing a demonstration project in the Albemarle Sound for the National Monitoring Network for U.S. coastal waters and their tributaries. The goal of the National Monitoring Network is to provide information about the health of our oceans and coastal ecosystems and inland influences on coastal waters for improved resource...

  4. Analysis of Layered Social Networks

    Science.gov (United States)

    2006-09-01

    xiii List of Abbreviations . . . . . . . . . . . . . . . . . . . . . . . . . . . . . xv I. Introduction ...Islamiya JP Joint Publication JTC Joint Targeting Cycle KPP Key Player Problem MCDM Multi-Criteria Decision Making MP Mathematical Programming MST...ANALYSIS OF LAYERED SOCIAL NETWORKS I. Introduction “To know them means to eliminate them” - Colonel Mathieu in the movie, Battle of Algiers

  5. Statistical analysis of network data with R

    CERN Document Server

    Kolaczyk, Eric D

    2014-01-01

    Networks have permeated everyday life through everyday realities like the Internet, social networks, and viral marketing. As such, network analysis is an important growth area in the quantitative sciences, with roots in social network analysis going back to the 1930s and graph theory going back centuries. Measurement and analysis are integral components of network research. As a result, statistical methods play a critical role in network analysis. This book is the first of its kind in network research. It can be used as a stand-alone resource in which multiple R packages are used to illustrate how to conduct a wide range of network analyses, from basic manipulation and visualization, to summary and characterization, to modeling of network data. The central package is igraph, which provides extensive capabilities for studying network graphs in R. This text builds on Eric D. Kolaczyk’s book Statistical Analysis of Network Data (Springer, 2009).

  6. Exploration Knowledge Sharing Networks Using Social Network Analysis Methods

    Directory of Open Access Journals (Sweden)

    Győző Attila Szilágyi

    2017-10-01

    Full Text Available Knowledge sharing within organization is one of the key factor for success. The organization, where knowledge sharing takes place faster and more efficiently, is able to adapt to changes in the market environment more successfully, and as a result, it may obtain a competitive advantage. Knowledge sharing in an organization is carried out through formal and informal human communication contacts during work. This forms a multi-level complex network whose quantitative and topological characteristics largely determine how quickly and to what extent the knowledge travels within organization. The study presents how different networks of knowledge sharing in the organization can be explored by means of network analysis methods through a case study, and which role play the properties of these networks in fast and sufficient spread of knowledge in organizations. The study also demonstrates the practical applications of our research results. Namely, on the basis of knowledge sharing educational strategies can be developed in an organization, and further, competitiveness of an organization may increase due to those strategies’ application.

  7. Demonstration of EDFA Cognitive Gain Control via GMPLS for Mixed Modulation Formats in Heterogeneous Optical Networks

    DEFF Research Database (Denmark)

    Oliveira, Juliano R.; Caballero Jambrina, Antonio; Magalhães, Eduardo

    2013-01-01

    We demonstrate cognitive gain control for EDFA operation in real-time GMPLS controlled heterogeneous optical testbed with 10G/100G/200G/400G lightpaths. Cognitive control maintains the network BER below FEC-limit for up to 6 dB of induced attenuation penalty.......We demonstrate cognitive gain control for EDFA operation in real-time GMPLS controlled heterogeneous optical testbed with 10G/100G/200G/400G lightpaths. Cognitive control maintains the network BER below FEC-limit for up to 6 dB of induced attenuation penalty....

  8. Trimming of mammalian transcriptional networks using network component analysis

    Directory of Open Access Journals (Sweden)

    Liao James C

    2010-10-01

    Full Text Available Abstract Background Network Component Analysis (NCA has been used to deduce the activities of transcription factors (TFs from gene expression data and the TF-gene binding relationship. However, the TF-gene interaction varies in different environmental conditions and tissues, but such information is rarely available and cannot be predicted simply by motif analysis. Thus, it is beneficial to identify key TF-gene interactions under the experimental condition based on transcriptome data. Such information would be useful in identifying key regulatory pathways and gene markers of TFs in further studies. Results We developed an algorithm to trim network connectivity such that the important regulatory interactions between the TFs and the genes were retained and the regulatory signals were deduced. Theoretical studies demonstrated that the regulatory signals were accurately reconstructed even in the case where only three independent transcriptome datasets were available. At least 80% of the main target genes were correctly predicted in the extreme condition of high noise level and small number of datasets. Our algorithm was tested with transcriptome data taken from mice under rapamycin treatment. The initial network topology from the literature contains 70 TFs, 778 genes, and 1423 edges between the TFs and genes. Our method retained 1074 edges (i.e. 75% of the original edge number and identified 17 TFs as being significantly perturbed under the experimental condition. Twelve of these TFs are involved in MAPK signaling or myeloid leukemia pathways defined in the KEGG database, or are known to physically interact with each other. Additionally, four of these TFs, which are Hif1a, Cebpb, Nfkb1, and Atf1, are known targets of rapamycin. Furthermore, the trimmed network was able to predict Eno1 as an important target of Hif1a; this key interaction could not be detected without trimming the regulatory network. Conclusions The advantage of our new algorithm

  9. Transmission analysis in WDM networks

    DEFF Research Database (Denmark)

    Rasmussen, Christian Jørgen

    1999-01-01

    This thesis describes the development of a computer-based simulator for transmission analysis in optical wavelength division multiplexing networks. A great part of the work concerns fundamental optical network simulator issues. Among these issues are identification of the versatility and user......-friendliness demands which such a simulator must meet, development of the "spectral window representation" for representation of the optical signals and finding an effective way of handling the optical signals in the computer memory. One important issue more is the rules for the determination of the order in which...... the different component models are invoked during the simulation of a system. A simple set of rules which makes it possible to simulate any network architectures is laid down. The modelling of the nonlinear fibre and the optical receiver is also treated. The work on the fibre concerns the numerical solution...

  10. Mathematical Analysis of Urban Spatial Networks

    CERN Document Server

    Blanchard, Philippe

    2009-01-01

    Cities can be considered to be among the largest and most complex artificial networks created by human beings. Due to the numerous and diverse human-driven activities, urban network topology and dynamics can differ quite substantially from that of natural networks and so call for an alternative method of analysis. The intent of the present monograph is to lay down the theoretical foundations for studying the topology of compact urban patterns, using methods from spectral graph theory and statistical physics. These methods are demonstrated as tools to investigate the structure of a number of real cities with widely differing properties: medieval German cities, the webs of city canals in Amsterdam and Venice, and a modern urban structure such as found in Manhattan. Last but not least, the book concludes by providing a brief overview of possible applications that will eventually lead to a useful body of knowledge for architects, urban planners and civil engineers.

  11. Hybrid Neural-Network: Genetic Algorithm Technique for Aircraft Engine Performance Diagnostics Developed and Demonstrated

    Science.gov (United States)

    Kobayashi, Takahisa; Simon, Donald L.

    2002-01-01

    As part of the NASA Aviation Safety Program, a unique model-based diagnostics method that employs neural networks and genetic algorithms for aircraft engine performance diagnostics has been developed and demonstrated at the NASA Glenn Research Center against a nonlinear gas turbine engine model. Neural networks are applied to estimate the internal health condition of the engine, and genetic algorithms are used for sensor fault detection, isolation, and quantification. This hybrid architecture combines the excellent nonlinear estimation capabilities of neural networks with the capability to rank the likelihood of various faults given a specific sensor suite signature. The method requires a significantly smaller data training set than a neural network approach alone does, and it performs the combined engine health monitoring objectives of performance diagnostics and sensor fault detection and isolation in the presence of nominal and degraded engine health conditions.

  12. Spectral Analysis of Rich Network Topology in Social Networks

    Science.gov (United States)

    Wu, Leting

    2013-01-01

    Social networks have received much attention these days. Researchers have developed different methods to study the structure and characteristics of the network topology. Our focus is on spectral analysis of the adjacency matrix of the underlying network. Recent work showed good properties in the adjacency spectral space but there are few…

  13. Analysis of Semantic Networks using Complex Networks Concepts

    DEFF Research Database (Denmark)

    Ortiz-Arroyo, Daniel

    2013-01-01

    In this paper we perform a preliminary analysis of semantic networks to determine the most important terms that could be used to optimize a summarization task. In our experiments, we measure how the properties of a semantic network change, when the terms in the network are removed. Our preliminar...... results indicate that this approach provides good results on the semantic network analyzed in this paper....

  14. COalitions in COOperation Networks (COCOON): Social Network Analysis and Game Theory to Enhance Cooperation Networks

    NARCIS (Netherlands)

    Sie, Rory

    2012-01-01

    Sie, R. L. L. (2012). COalitions in COOperation Networks (COCOON): Social Network Analysis and Game Theory to Enhance Cooperation Networks (Unpublished doctoral dissertation). September, 28, 2012, Open Universiteit in the Netherlands (CELSTEC), Heerlen, The Netherlands.

  15. AEP Ohio gridSMART Demonstration Project Real-Time Pricing Demonstration Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Widergren, Steven E.; Subbarao, Krishnappa; Fuller, Jason C.; Chassin, David P.; Somani, Abhishek; Marinovici, Maria C.; Hammerstrom, Janelle L.

    2014-02-01

    This report contributes initial findings from an analysis of significant aspects of the gridSMART® Real-Time Pricing (RTP) – Double Auction demonstration project. Over the course of four years, Pacific Northwest National Laboratory (PNNL) worked with American Electric Power (AEP), Ohio and Battelle Memorial Institute to design, build, and operate an innovative system to engage residential consumers and their end-use resources in a participatory approach to electric system operations, an incentive-based approach that has the promise of providing greater efficiency under normal operating conditions and greater flexibility to react under situations of system stress. The material contained in this report supplements the findings documented by AEP Ohio in the main body of the gridSMART report. It delves into three main areas: impacts on system operations, impacts on households, and observations about the sensitivity of load to price changes.

  16. Secure Access Management for a Secret Operational Network (SAMSON) Technology Demonstrator (TD). Empire Challenge (EC) / Coalition Warrior Interoperability Demonstration (CWID)

    Science.gov (United States)

    2011-08-15

    Services hosted on this network include connectivity service such as VPN servers and common services used across all networks such as LDAP and DNS...of one database, one LDAP Directory, and a high number of configuration files requiring modifications can take up to 3 days with a full set of...production grade documentation. The Samson system has two databases, one ldap directory, eleven server machines, and many configuration files which need

  17. Networks and network analysis for defence and security

    CERN Document Server

    Masys, Anthony J

    2014-01-01

    Networks and Network Analysis for Defence and Security discusses relevant theoretical frameworks and applications of network analysis in support of the defence and security domains. This book details real world applications of network analysis to support defence and security. Shocks to regional, national and global systems stemming from natural hazards, acts of armed violence, terrorism and serious and organized crime have significant defence and security implications. Today, nations face an uncertain and complex security landscape in which threats impact/target the physical, social, economic

  18. Analysis of Ego Network Structure in Online Social Networks

    OpenAIRE

    Arnaboldi, Valerio; Conti, Marco; Passarella, Andrea; Pezzoni, Fabio

    2012-01-01

    Results about offline social networks demonstrated that the social relationships that an individual (ego) maintains with other people (alters) can be organised into different groups according to the ego network model. In this model the ego can be seen as the centre of a series of layers of increasing size. Social relationships between ego and alters in layers close to ego are stronger than those belonging to more external layers. Online Social Networks are becoming a fundamental medium for hu...

  19. Applying temporal network analysis to the venture capital market

    Science.gov (United States)

    Zhang, Xin; Feng, Ling; Zhu, Rongqian; Stanley, H. Eugene

    2015-10-01

    Using complex network theory to study the investment relationships of venture capital firms has produced a number of significant results. However, previous studies have often neglected the temporal properties of those relationships, which in real-world scenarios play a pivotal role. Here we examine the time-evolving dynamics of venture capital investment in China by constructing temporal networks to represent (i) investment relationships between venture capital firms and portfolio companies and (ii) the syndication ties between venture capital investors. The evolution of the networks exhibits rich variations in centrality, connectivity and local topology. We demonstrate that a temporal network approach provides a dynamic and comprehensive analysis of real-world networks.

  20. Signed Link Analysis in Social Media Networks

    OpenAIRE

    Beigi, Ghazaleh; Tang, Jiliang; Liu, Huan

    2016-01-01

    Numerous real-world relations can be represented by signed networks with positive links (e.g., trust) and negative links (e.g., distrust). Link analysis plays a crucial role in understanding the link formation and can advance various tasks in social network analysis such as link prediction. The majority of existing works on link analysis have focused on unsigned social networks. The existence of negative links determines that properties and principles of signed networks are substantially dist...

  1. Social network analysis in medical education

    OpenAIRE

    Isba, Rachel; Woolf, Katherine; Hanneman, Robert

    2016-01-01

    Content\\ud Humans are fundamentally social beings. The social systems within which we live our lives (families, schools, workplaces, professions, friendship groups) have a significant influence on our health, success and well-being. These groups can be characterised as networks and analysed using social network analysis.\\ud \\ud Social Network Analysis\\ud Social network analysis is a mainly quantitative method for analysing how relationships between individuals form and affect those individual...

  2. Beyond ectomycorrhizal bipartite networks: projected networks demonstrate contrasted patterns between early- and late-successional plants in Corsica

    Science.gov (United States)

    Taudiere, Adrien; Munoz, François; Lesne, Annick; Monnet, Anne-Christine; Bellanger, Jean-Michel; Selosse, Marc-André; Moreau, Pierre-Arthur; Richard, Franck

    2015-01-01

    The ectomycorrhizal (ECM) symbiosis connects mutualistic plants and fungal species into bipartite networks. While links between one focal ECM plant and its fungal symbionts have been widely documented, systemic views of ECM networks are lacking, in particular, concerning the ability of fungal species to mediate indirect ecological interactions between ECM plant species (projected-ECM networks). We assembled a large dataset of plant–fungi associations at the species level and at the scale of Corsica using molecular data and unambiguously host-assigned records to: (i) examine the correlation between the number of fungal symbionts of a plant species and the average specialization of these fungal species, (ii) explore the structure of the plant–plant projected network and (iii) compare plant association patterns in regard to their position along the ecological succession. Our analysis reveals no trade-off between specialization of plants and specialization of their partners and a saturation of the plant projected network. Moreover, there is a significantly lower-than-expected sharing of partners between early- and late-successional plant species, with fewer fungal partners for early-successional ones and similar average specialization of symbionts of early- and late-successional plants. Our work paves the way for ecological readings of Mediterranean landscapes that include the astonishing diversity of below-ground interactions. PMID:26539201

  3. Beyond ectomycorrhizal bipartite networks: projected networks demonstrate contrasted patterns between early- and late-successional plants in Corsica.

    Directory of Open Access Journals (Sweden)

    Adrien eTaudiere

    2015-10-01

    Full Text Available The ectomycorrhizal (ECM symbiosis connects mutualistic plants and fungal species into bipartite networks. While links between one focal ECM plant and its fungal symbionts have been widely documented, systemic views of ECM networks are lacking, in particular, concerning the ability of fungal species to mediate indirect ecological interactions between ECM plant species (projected-ECM networks. We assembled a large dataset of plant-fungi associations at the species level and at the scale of Corsica using molecular data and unambiguously host-assigned records to: (i examine the correlation between the number of fungal symbionts of a plant species and the average specialization of these fungal species, (ii explore the structure of the plant-plant projected network and (iii compare plant association patterns in regard to their position along the ecological succession. Our analysis reveals no trade-off between specialization of plants and specialization of their partners and a saturation of the plant projected network. Moreover, there is a significantly lower-than-expected sharing of partners between early- and late-successional plant species, with fewer fungal partners for early-successional ones and similar average specialization of symbionts of early- and late-successional plants. Our work paves the way for ecological readings of Mediterranean landscapes that include the astonishing diversity of below-ground interactions.

  4. Topological Analysis of Wireless Networks (TAWN)

    Science.gov (United States)

    2016-05-31

    19b. TELEPHONE NUMBER (Include area code) 31-05-2016 FINAL REPORT 12-02-2015 -- 31-05-2016 Topological Analysis of Wireless Networks (TAWN) Robinson...mathematical literature on sheaves that describes how to draw global ( network -wide) inferences from them. Wireless network , local homology, sheaf...topology U U U UU 32 Michael Robinson 202-885-3681 Final Report: May 2016 Topological Analysis of Wireless Networks Principal Investigator: Prof. Michael

  5. Security Enhanced Multi-Domain Network Management for Joint Warrior Interoperability Demonstration (JWID)

    National Research Council Canada - National Science Library

    Marcinkowski, James; Miller, Roger

    2005-01-01

    .... To assist administrative personnel in maintaining and monitoring a computer network, commercial network management tools are used that collect data regarding network functionality and availability...

  6. Social network analysis community detection and evolution

    CERN Document Server

    Missaoui, Rokia

    2015-01-01

    This book is devoted to recent progress in social network analysis with a high focus on community detection and evolution. The eleven chapters cover the identification of cohesive groups, core components and key players either in static or dynamic networks of different kinds and levels of heterogeneity. Other important topics in social network analysis such as influential detection and maximization, information propagation, user behavior analysis, as well as network modeling and visualization are also presented. Many studies are validated through real social networks such as Twitter. This edit

  7. Network analysis literacy a practical approach to the analysis of networks

    CERN Document Server

    Zweig, Katharina A

    2014-01-01

    Network Analysis Literacy focuses on design principles for network analytics projects. The text enables readers to: pose a defined network analytic question; build a network to answer the question; choose or design the right network analytic methods for a particular purpose, and more.

  8. Social network analysis and dual rover communications

    Science.gov (United States)

    Litaker, Harry L.; Howard, Robert L.

    2013-10-01

    Social network analysis (SNA) refers to the collection of techniques, tools, and methods used in sociometry aiming at the analysis of social networks to investigate decision making, group communication, and the distribution of information. Human factors engineers at the National Aeronautics and Space Administration (NASA) conducted a social network analysis on communication data collected during a 14-day field study operating a dual rover exploration mission to better understand the relationships between certain network groups such as ground control, flight teams, and planetary science. The analysis identified two communication network structures for the continuous communication and Twice-a-Day Communication scenarios as a split network and negotiated network respectfully. The major nodes or groups for the networks' architecture, transmittal status, and information were identified using graphical network mapping, quantitative analysis of subjective impressions, and quantified statistical analysis using Sociometric Statue and Centrality. Post-questionnaire analysis along with interviews revealed advantages and disadvantages of each network structure with team members identifying the need for a more stable continuous communication network, improved robustness of voice loops, and better systems training/capabilities for scientific imagery data and operational data during Twice-a-Day Communications.

  9. Performance Demonstration Program Plan for Analysis of Simulated Headspace Gases

    Energy Technology Data Exchange (ETDEWEB)

    Carlsbad Field Office

    2006-04-01

    The Performance Demonstration Program (PDP) for headspace gases distributes sample gases of volatile organic compounds (VOCs) for analysis. Participating measurement facilities (i.e., fixed laboratories, mobile analysis systems, and on-line analytical systems) are located across the United States. Each sample distribution is termed a PDP cycle. These evaluation cycles provide an objective measure of the reliability of measurements performed for transuranic (TRU) waste characterization. The primary documents governing the conduct of the PDP are the Quality Assurance Program Document (QAPD) (DOE/CBFO-94-1012) and the Waste Isolation Pilot Plant (WIPP) Waste Analysis Plan (WAP) contained in the Hazardous Waste Facility Permit (NM4890139088-TSDF) issued by the New Mexico Environment Department (NMED). The WAP requires participation in the PDP; the PDP must comply with the QAPD and the WAP. This plan implements the general requirements of the QAPD and the applicable requirements of the WAP for the Headspace Gas (HSG) PDP. Participating measurement facilities analyze blind audit samples of simulated TRU waste package headspace gases according to the criteria set by this PDP Plan. Blind audit samples (hereafter referred to as PDP samples) are used as an independent means to assess each measurement facility’s compliance with the WAP quality assurance objectives (QAOs). To the extent possible, the concentrations of VOC analytes in the PDP samples encompass the range of concentrations anticipated in actual TRU waste package headspace gas samples. Analyses of headspace gases are required by the WIPP to demonstrate compliance with regulatory requirements. These analyses must be performed by measurement facilities that have demonstrated acceptable performance in this PDP. These analyses are referred to as WIPP analyses and the TRU waste package headspace gas samples on which they are performed are referred to as WIPP samples in this document. Participating measurement

  10. Performance Demonstration Program Plan for Analysis of Simulated Headspace Gases

    Energy Technology Data Exchange (ETDEWEB)

    Carlsbad Field Office

    2007-11-13

    The Performance Demonstration Program (PDP) for headspace gases distributes blind audit samples in a gas matrix for analysis of volatile organic compounds (VOCs). Participating measurement facilities (i.e., fixed laboratories, mobile analysis systems, and on-line analytical systems) are located across the United States. Each sample distribution is termed a PDP cycle. These evaluation cycles provide an objective measure of the reliability of measurements performed for transuranic (TRU) waste characterization. The primary documents governing the conduct of the PDP are the Quality Assurance Program Document (QAPD) (DOE/CBFO-94-1012) and the Waste Isolation Pilot Plant (WIPP) Waste Analysis Plan (WAP) contained in the Hazardous Waste Facility Permit (NM4890139088-TSDF) issued by the New Mexico Environment Department (NMED). The WAP requires participation in the PDP; the PDP must comply with the QAPD and the WAP. This plan implements the general requirements of the QAPD and the applicable requirements of the WAP for the Headspace Gas (HSG) PDP. Participating measurement facilities analyze blind audit samples of simulated TRU waste package headspace gases according to the criteria set by this PDP Plan. Blind audit samples (hereafter referred to as PDP samples) are used as an independent means to assess each measurement facility’s compliance with the WAP quality assurance objectives (QAOs). To the extent possible, the concentrations of VOC analytes in the PDP samples encompass the range of concentrations anticipated in actual TRU waste package headspace gas samples. Analyses of headspace gases are required by the WIPP to demonstrate compliance with regulatory requirements. These analyses must be performed by measurement facilities that have demonstrated acceptable performance in this PDP. These analyses are referred to as WIPP analyses and the TRU waste package headspace gas samples on which they are performed are referred to as WIPP samples in this document

  11. Performance Demonstration Program Plan for Analysis of Simulated Headspace Gases

    Energy Technology Data Exchange (ETDEWEB)

    Carlsbad Field Office

    2007-11-19

    The Performance Demonstration Program (PDP) for headspace gases distributes blind audit samples in a gas matrix for analysis of volatile organic compounds (VOCs). Participating measurement facilities (i.e., fixed laboratories, mobile analysis systems, and on-line analytical systems) are located across the United States. Each sample distribution is termed a PDP cycle. These evaluation cycles provide an objective measure of the reliability of measurements performed for transuranic (TRU) waste characterization. The primary documents governing the conduct of the PDP are the Quality Assurance Program Document (QAPD) (DOE/CBFO-94-1012) and the Waste Isolation Pilot Plant (WIPP) Waste Analysis Plan (WAP) contained in the Hazardous Waste Facility Permit (NM4890139088-TSDF) issued by the New Mexico Environment Department (NMED). The WAP requires participation in the PDP; the PDP must comply with the QAPD and the WAP. This plan implements the general requirements of the QAPD and the applicable requirements of the WAP for the Headspace Gas (HSG) PDP. Participating measurement facilities analyze blind audit samples of simulated TRU waste package headspace gases according to the criteria set by this PDP Plan. Blind audit samples (hereafter referred to as PDP samples) are used as an independent means to assess each measurement facility’s compliance with the WAP quality assurance objectives (QAOs). To the extent possible, the concentrations of VOC analytes in the PDP samples encompass the range of concentrations anticipated in actual TRU waste package headspace gas samples. Analyses of headspace gases are required by the WIPP to demonstrate compliance with regulatory requirements. These analyses must be performed by measurement facilities that have demonstrated acceptable performance in this PDP. These analyses are referred to as WIPP analyses and the TRU waste package headspace gas samples on which they are performed are referred to as WIPP samples in this document

  12. Applications of Social Network Analysis

    Science.gov (United States)

    Thilagam, P. Santhi

    A social network [2] is a description of the social structure between actors, mostly persons, groups or organizations. It indicates the ways in which they are connected with each other by some relationship such as friendship, kinship, finance exchange etc. In a nutshell, when the person uses already known/unknown people to create new contacts, it forms social networking. The social network is not a new concept rather it can be formed when similar people interact with each other directly or indirectly to perform particular task. Examples of social networks include a friendship networks, collaboration networks, co-authorship networks, and co-employees networks which depict the direct interaction among the people. There are also other forms of social networks, such as entertainment networks, business Networks, citation networks, and hyperlink networks, in which interaction among the people is indirect. Generally, social networks operate on many levels, from families up to the level of nations and assists in improving interactive knowledge sharing, interoperability and collaboration.

  13. Experimental demonstration of OSPF-TE extensions in muiti-domain OBS networks connected by GMPLS network

    Science.gov (United States)

    Tian, Chunlei; Yin, Yawei; Wu, Jian; Lin, Jintong

    2008-11-01

    The interworking network of Generalized Multi-Protocol Label Switching (GMPLS) and Optical Burst Switching (OBS) is attractive network architecture for the future IP/DWDM network nowadays. In this paper, OSPF-TE extensions for multi-domain Optical Burst Switching networks connected by GMPLS controlled WDM network are proposed, the corresponding experimental results such as the advertising latency are also presented by using an OBS network testbed. The experimental results show that it works effectively on the OBS/GMPLS networks.

  14. Network meta-analysis, electrical networks and graph theory.

    Science.gov (United States)

    Rücker, Gerta

    2012-12-01

    Network meta-analysis is an active field of research in clinical biostatistics. It aims to combine information from all randomized comparisons among a set of treatments for a given medical condition. We show how graph-theoretical methods can be applied to network meta-analysis. A meta-analytic graph consists of vertices (treatments) and edges (randomized comparisons). We illustrate the correspondence between meta-analytic networks and electrical networks, where variance corresponds to resistance, treatment effects to voltage, and weighted treatment effects to current flows. Based thereon, we then show that graph-theoretical methods that have been routinely applied to electrical networks also work well in network meta-analysis. In more detail, the resulting consistent treatment effects induced in the edges can be estimated via the Moore-Penrose pseudoinverse of the Laplacian matrix. Moreover, the variances of the treatment effects are estimated in analogy to electrical effective resistances. It is shown that this method, being computationally simple, leads to the usual fixed effect model estimate when applied to pairwise meta-analysis and is consistent with published results when applied to network meta-analysis examples from the literature. Moreover, problems of heterogeneity and inconsistency, random effects modeling and including multi-armed trials are addressed. Copyright © 2012 John Wiley & Sons, Ltd. Copyright © 2012 John Wiley & Sons, Ltd.

  15. Area protection network (APN): a concept for autonomous perimeter surveillance and protection with demonstrator

    Science.gov (United States)

    Lindquist, Per

    2007-10-01

    Area Protection Network (APN) is a concept for autonomous surveillance and perimeter protection. It is a network of sensors, software and a command & control system. The purpose is to protect military and civilian objects and installations with an all-weather, 24-hour, modular, low-cost and mobile system. The system shall primarily be able to detect and track human activity in the area of interest and also detect and classify behaviour in order to trig appropriate actions. In order to show the concept in real life, an operational demonstrator was developed during 2006. The APN demonstrator currently consists of a radar (SIRS77), infrared sensors (PTES), visual sensors (video camera), image processing and data fusion software (Impress) and a command and control system (WCU) The APN demonstrator can currently detect and track multiple humans and/or vehicles in limited 3D. The tracks are presented on a map in the operator's graphical user interface. The operator can define multiple alarm zones in the map. If any track enters an alarm zone an alarm is triggered. The system also includes "blue force" tracking.

  16. Statistical Network Analysis for Functional MRI: Mean Networks and Group Comparisons.

    Directory of Open Access Journals (Sweden)

    Cedric E Ginestet

    2014-05-01

    Full Text Available Comparing networks in neuroscience is hard, because the topological properties of a given network are necessarily dependent on the number of edges of that network. This problem arises in the analysis of both weighted and unweighted networks. The term density is often used in this context, in order to refer to the mean edge weight of a weighted network, or to the number of edges in an unweighted one. Comparing families of networks is therefore statistically difficult because differences in topology are necessarily associated with differences in density. In this review paper, we consider this problem from two different perspectives, which include (i the construction of summary networks, such as how to compute and visualize the mean network from a sample of network-valued data points; and (ii how to test for topological differences, when two families of networks also exhibit significant differences in density. In the first instance, we show that the issue of summarizing a family of networks can be conducted by either adopting a mass-univariate approach, which produces a statistical parametric network (SPN, or by directly computing the mean network, provided that a metric has been specified on the space of all networks with a given number of nodes. In the second part of this review, we then highlight the inherent problems associated with the comparison of topological functions of families of networks that differ in density. In particular, we show that a wide range of topological summaries, such as global efficiency and network modularity are highly sensitive to differences in density. Moreover, these problems are not restricted to unweighted metrics, as we demonstrate that the same issues remain present when considering the weighted versions of these metrics. We conclude by encouraging caution, when reporting such statistical comparisons, and by emphasizing the importance of constructing summary networks.

  17. Network analysis of unstructured EHR data for clinical research.

    Science.gov (United States)

    Bauer-Mehren, Anna; Lependu, Paea; Iyer, Srinivasan V; Harpaz, Rave; Leeper, Nicholas J; Shah, Nigam H

    2013-01-01

    In biomedical research, network analysis provides a conceptual framework for interpreting data from high-throughput experiments. For example, protein-protein interaction networks have been successfully used to identify candidate disease genes. Recently, advances in clinical text processing and the increasing availability of clinical data have enabled analogous analyses on data from electronic medical records. We constructed networks of diseases, drugs, medical devices and procedures using concepts recognized in clinical notes from the Stanford clinical data warehouse. We demonstrate the use of the resulting networks for clinical research informatics in two ways-cohort construction and outcomes analysis-by examining the safety of cilostazol in peripheral artery disease patients as a use case. We show that the network-based approaches can be used for constructing patient cohorts as well as for analyzing differences in outcomes by comparing with standard methods, and discuss the advantages offered by network-based approaches.

  18. Statistical Analysis of Bus Networks in India

    CERN Document Server

    Chatterjee, Atanu; Ramadurai, Gitakrishnan

    2015-01-01

    Through the past decade the field of network science has established itself as a common ground for the cross-fertilization of exciting inter-disciplinary studies which has motivated researchers to model almost every physical system as an interacting network consisting of nodes and links. Although public transport networks such as airline and railway networks have been extensively studied, the status of bus networks still remains in obscurity. In developing countries like India, where bus networks play an important role in day-to-day commutation, it is of significant interest to analyze its topological structure and answer some of the basic questions on its evolution, growth, robustness and resiliency. In this paper, we model the bus networks of major Indian cities as graphs in \\textit{L}-space, and evaluate their various statistical properties using concepts from network science. Our analysis reveals a wide spectrum of network topology with the common underlying feature of small-world property. We observe tha...

  19. egoSlider: Visual Analysis of Egocentric Network Evolution.

    Science.gov (United States)

    Wu, Yanhong; Pitipornvivat, Naveen; Zhao, Jian; Yang, Sixiao; Huang, Guowei; Qu, Huamin

    2016-01-01

    Ego-network, which represents relationships between a specific individual, i.e., the ego, and people connected to it, i.e., alters, is a critical target to study in social network analysis. Evolutionary patterns of ego-networks along time provide huge insights to many domains such as sociology, anthropology, and psychology. However, the analysis of dynamic ego-networks remains challenging due to its complicated time-varying graph structures, for example: alters come and leave, ties grow stronger and fade away, and alter communities merge and split. Most of the existing dynamic graph visualization techniques mainly focus on topological changes of the entire network, which is not adequate for egocentric analytical tasks. In this paper, we present egoSlider, a visual analysis system for exploring and comparing dynamic ego-networks. egoSlider provides a holistic picture of the data through multiple interactively coordinated views, revealing ego-network evolutionary patterns at three different layers: a macroscopic level for summarizing the entire ego-network data, a mesoscopic level for overviewing specific individuals' ego-network evolutions, and a microscopic level for displaying detailed temporal information of egos and their alters. We demonstrate the effectiveness of egoSlider with a usage scenario with the DBLP publication records. Also, a controlled user study indicates that in general egoSlider outperforms a baseline visualization of dynamic networks for completing egocentric analytical tasks.

  20. Thermal Modeling in Support of the Edison Demonstration of Smallsat Networks Project

    Science.gov (United States)

    Coker, Robert F.

    2013-01-01

    NASA's Edison program is intending to launch a swarm of at least 8 small satellites in 2013. This swarm of 1.5U Cubesats, the Edison Demonstration of Smallsat Networks (EDSN) project, will demonstrate intra-swarm communications and multi-point in-situ space physics data acquisition. In support of the design and testing of the EDSN satellites, a geometrically accurate thermal model has been constructed. Due to the low duty cycle of most components, no significant overheating issues were found. The predicted mininum temperatures of the external antennas are low enough, however, that some mitigation may be in order. The development and application of the model will be discussed in detail.

  1. Egocentric social network analysis of pathological gambling.

    Science.gov (United States)

    Meisel, Matthew K; Clifton, Allan D; Mackillop, James; Miller, Joshua D; Campbell, W Keith; Goodie, Adam S

    2013-03-01

    To apply social network analysis (SNA) to investigate whether frequency and severity of gambling problems were associated with different network characteristics among friends, family and co-workers is an innovative way to look at relationships among individuals; the current study was the first, to our knowledge, to apply SNA to gambling behaviors. Egocentric social network analysis was used to characterize formally the relationships between social network characteristics and gambling pathology. Laboratory-based questionnaire and interview administration. Forty frequent gamblers (22 non-pathological gamblers, 18 pathological gamblers) were recruited from the community. The SNA revealed significant social network compositional differences between the two groups: pathological gamblers (PGs) had more gamblers, smokers and drinkers in their social networks than did non-pathological gamblers (NPGs). PGs had more individuals in their network with whom they personally gambled, smoked and drank than those with who were NPG. Network ties were closer to individuals in their networks who gambled, smoked and drank more frequently. Associations between gambling severity and structural network characteristics were not significant. Pathological gambling is associated with compositional but not structural differences in social networks. Pathological gamblers differ from non-pathological gamblers in the number of gamblers, smokers and drinkers in their social networks. Homophily within the networks also indicates that gamblers tend to be closer with other gamblers. This homophily may serve to reinforce addictive behaviors, and may suggest avenues for future study or intervention. © 2012 The Authors, Addiction © 2012 Society for the Study of Addiction.

  2. Northern emporia and maritime networks. Modelling past communication using archaeological network analysis

    DEFF Research Database (Denmark)

    Sindbæk, Søren Michael

    2015-01-01

    Long-distance communication has emerged as a particular focus for archaeologicalexploration using network theory, analysis, and modelling. The promise is apparentlyobvious: communication in the past doubtlessly had properties of complex, dynamicnetworks, and archaeological datasets almost certainly...... preserve patterns of thisinteraction. Formal network analysis and modelling holds the potential to identify anddemonstrate such patterns, where traditional methods often prove inadequate. Thearchaeological study of communication networks in the past, however, calls for radically different analytical......,and use patterns. This point is demonstrated with reference to a study of Viking-period communication in the North Sea region...

  3. Industrial Fuel Gas Demonstration Plant Program. Volume III. Demonstration plant environmental analysis (Deliverable No. 27)

    Energy Technology Data Exchange (ETDEWEB)

    1979-08-01

    An Environmental Report on the Memphis Light, Gas and Water Division Industrial Fuel Demonstration Plant was prepared for submission to the US Department of Energy under Contract ET-77-C-01-2582. This document is Volume III of a three-volume Environmental Report. Volume I consists of the Summary, Introduction and the Description of the Proposed Action. Volume II consists of the Description of the Existing Environment. Volume III contains the Environmental Impacts of the Proposed Action, Mitigating Measures and Alternatives to the Proposed Action.

  4. Satellite image analysis using neural networks

    Science.gov (United States)

    Sheldon, Roger A.

    1990-01-01

    The tremendous backlog of unanalyzed satellite data necessitates the development of improved methods for data cataloging and analysis. Ford Aerospace has developed an image analysis system, SIANN (Satellite Image Analysis using Neural Networks) that integrates the technologies necessary to satisfy NASA's science data analysis requirements for the next generation of satellites. SIANN will enable scientists to train a neural network to recognize image data containing scenes of interest and then rapidly search data archives for all such images. The approach combines conventional image processing technology with recent advances in neural networks to provide improved classification capabilities. SIANN allows users to proceed through a four step process of image classification: filtering and enhancement, creation of neural network training data via application of feature extraction algorithms, configuring and training a neural network model, and classification of images by application of the trained neural network. A prototype experimentation testbed was completed and applied to climatological data.

  5. Social Network Analysis and informal trade

    DEFF Research Database (Denmark)

    Walther, Olivier

    networks can be applied to better understand informal trade in developing countries, with a particular focus on Africa. The paper starts by discussing some of the fundamental concepts developed by social network analysis. Through a number of case studies, we show how social network analysis can...... illuminate the relevant causes of social patterns, the impact of social ties on economic performance, the diffusion of resources and information, and the exercise of power. The paper then examines some of the methodological challenges of social network analysis and how it can be combined with other...

  6. Social network analysis and supply chain management

    Directory of Open Access Journals (Sweden)

    Raúl Rodríguez Rodríguez

    2016-01-01

    Full Text Available This paper deals with social network analysis and how it could be integrated within supply chain management from a decision-making point of view. Even though the benefits of using social analysis have are widely accepted at both academic and industry/services context, there is still a lack of solid frameworks that allow decision-makers to connect the usage and obtained results of social network analysis – mainly both information and knowledge flows and derived results- with supply chain management objectives and goals. This paper gives an overview of social network analysis, the main social network analysis metrics, supply chain performance and, finally, it identifies how future frameworks could close the gap and link the results of social network analysis with the supply chain management decision-making processes.

  7. 4th International Conference in Network Analysis

    CERN Document Server

    Koldanov, Petr; Pardalos, Panos

    2016-01-01

    The contributions in this volume cover a broad range of topics including maximum cliques, graph coloring, data mining, brain networks, Steiner forest, logistic and supply chain networks. Network algorithms and their applications to market graphs, manufacturing problems, internet networks and social networks are highlighted. The "Fourth International Conference in Network Analysis," held at the Higher School of Economics, Nizhny Novgorod in May 2014, initiated joint research between scientists, engineers and researchers from academia, industry and government; the major results of conference participants have been reviewed and collected in this Work. Researchers and students in mathematics, economics, statistics, computer science and engineering will find this collection a valuable resource filled with the latest research in network analysis.

  8. Research, development and demonstration. Issue paper - working group 3; Denmark. Smart Grid Network; Forskning, udvikling og demonstration. Issue paper, arbejdsgruppe 3

    Energy Technology Data Exchange (ETDEWEB)

    Balasiu, A. (Siemens A/S, Ballerup (Denmark)); Troi, A. (Danmarks Tekniske Univ.. Risoe Nationallaboratoriet for Baeredygtig Energi, Roskilde (Denmark)); Andersen, Casper (DI Energibranchen, Copenhagen (Denmark)) (and others)

    2011-07-01

    The Smart Grid Network was established in 2010 by the Danish climate and energy minister tasked with developing recommendations for future actions and initiatives that make it possible to handle up to 50% electricity from wind energy in the power system in 2020. The task of working group 3 was defined as: - An overview of the Danish research and development of smart grids and related areas; - Conducting an analysis of the research and development needs required for the introduction of a smart grid in Denmark. Based on this analysis, provide suggestions for new large research and development projects; - Provide recommendations on how the activities are best carried out taking into account innovation, economic growth and jobs. In the analysis it is explained that Denmark so far has a strong position in several elements of RD and D activities. This position will soon be threatened as several European countries have launched ambitious initiatives to strengthen the national position. The working group recommends that Denmark gives priority to Smart Grids as a national action in order to solve the challenge of technically and economically efficient integration of renewable energy. Smart Grid is a catalyst that strengthens a new green growth industry (cleantech) in Denmark. Research and development has an important role to play in this development. A common vision and roadmap must be established for research institutions, energy companies and industries related to research, development and demonstration of Smart Grid, which can maintain and expand Denmark's global leadership position. As part of this, there is a need to strengthen and market research infrastructures, which can turn Denmark into a global hub for smart grid development. There is a current need to strengthen the advanced technical and scientific research in the complexities of the power system, research on market design, user behavior and smart grid interoperability. (LN)

  9. METHODOLOGY OF MATHEMATICAL ANALYSIS IN POWER NETWORK

    OpenAIRE

    Jerzy Szkutnik; Mariusz Kawecki

    2008-01-01

    Power distribution network analysis is taken into account. Based on correlation coefficient authors establish methodology of mathematical analysis useful in finding substations bear responsibility for power stoppage. Also methodology of risk assessment will be carried out.

  10. Experimental demonstration of OpenFlow-based control plane for elastic lightpath provisioning in Flexi-Grid optical networks.

    Science.gov (United States)

    Zhang, Jiawei; Zhang, Jie; Zhao, Yongli; Yang, Hui; Yu, Xiaosong; Wang, Lei; Fu, Xihua

    2013-01-28

    Due to the prominent performance on networking virtualization and programmability, OpenFlow is widely regarded as a promising control plane technology in packet-switched IP networks as well as wavelength-switched optical networks. For the purpose of applying software programmable feature to future optical networks, we propose an OpenFlow-based control plane in Flexi-Grid optical networks. Experimental results demonstrate its feasibility of dynamic lightpath establishment and adjustment via extended OpenFlow protocol. Wireshark captures of the signaling procedure are printed out. Additionally, the overall latency including signaling and hardware for lightpath setup and adjustment is also reported.

  11. Experimental demonstration of OpenFlow-enabled media ecosystem architecture for high-end applications over metro and core networks.

    Science.gov (United States)

    Ntofon, Okung-Dike; Channegowda, Mayur P; Efstathiou, Nikolaos; Rashidi Fard, Mehdi; Nejabati, Reza; Hunter, David K; Simeonidou, Dimitra

    2013-02-25

    In this paper, a novel Software-Defined Networking (SDN) architecture is proposed for high-end Ultra High Definition (UHD) media applications. UHD media applications require huge amounts of bandwidth that can only be met with high-capacity optical networks. In addition, there are requirements for control frameworks capable of delivering effective application performance with efficient network utilization. A novel SDN-based Controller that tightly integrates application-awareness with network control and management is proposed for such applications. An OpenFlow-enabled test-bed demonstrator is reported with performance evaluations of advanced online and offline media- and network-aware schedulers.

  12. Photosynthesis energy factory: analysis, synthesis, and demonstration. Final report

    Energy Technology Data Exchange (ETDEWEB)

    1978-11-01

    This quantitative assessment of the potential of a combined dry-land Energy Plantation, wood-fired power plant, and algae wastewater treatment system demonstrates the cost-effectiveness of recycling certain by-products and effluents from one subsystem to another. Designed to produce algae up to the limit of the amount of carbon in municipal wastewater, the algae pond provides a positive cash credit, resulting mainly from the wastewater treatment credit, which may be used to reduce the cost of the Photosynthesis Energy Factory (PEF)-generated electricity. The algae pond also produces fertilizer, which reduces the cost of the biomass produced on the Energy Plantation, and some gas. The cost of electricity was as low as 35 mills per kilowatt-hour for a typical municipally-owned PEF consisting of a 65-MWe power plant, a 144-acre algae pond, and a 33,000-acre Energy Plantation. Using only conventional or near-term technology, the most cost-effective algae pond for a PEF is the carbon-limited secondary treatment system. This system does not recycle CO/sub 2/ from the flue gas. Analysis of the Energy Plantation subsystem at 15 sites revealed that plantations of 24,000 to 36,000 acres produce biomass at the lowest cost per ton. The following sites are recommended for more detailed evaluation as potential demonstration sites: Pensacola, Florida; Jamestown, New York; Knoxville, Tennessee; Martinsville, Virginia, and Greenwood, South Carolina. A major possible extension of the PEF concept is to include the possibility for irrigation.

  13. Measuring Road Network Vulnerability with Sensitivity Analysis

    Science.gov (United States)

    Jun-qiang, Leng; Long-hai, Yang; Liu, Wei-yi; Zhao, Lin

    2017-01-01

    This paper focuses on the development of a method for road network vulnerability analysis, from the perspective of capacity degradation, which seeks to identify the critical infrastructures in the road network and the operational performance of the whole traffic system. This research involves defining the traffic utility index and modeling vulnerability of road segment, route, OD (Origin Destination) pair and road network. Meanwhile, sensitivity analysis method is utilized to calculate the change of traffic utility index due to capacity degradation. This method, compared to traditional traffic assignment, can improve calculation efficiency and make the application of vulnerability analysis to large actual road network possible. Finally, all the above models and calculation method is applied to actual road network evaluation to verify its efficiency and utility. This approach can be used as a decision-supporting tool for evaluating the performance of road network and identifying critical infrastructures in transportation planning and management, especially in the resource allocation for mitigation and recovery. PMID:28125706

  14. Muscle networks: Connectivity analysis of EMG activity during postural control

    Science.gov (United States)

    Boonstra, Tjeerd W.; Danna-Dos-Santos, Alessander; Xie, Hong-Bo; Roerdink, Melvyn; Stins, John F.; Breakspear, Michael

    2015-12-01

    Understanding the mechanisms that reduce the many degrees of freedom in the musculoskeletal system remains an outstanding challenge. Muscle synergies reduce the dimensionality and hence simplify the control problem. How this is achieved is not yet known. Here we use network theory to assess the coordination between multiple muscles and to elucidate the neural implementation of muscle synergies. We performed connectivity analysis of surface EMG from ten leg muscles to extract the muscle networks while human participants were standing upright in four different conditions. We observed widespread connectivity between muscles at multiple distinct frequency bands. The network topology differed significantly between frequencies and between conditions. These findings demonstrate how muscle networks can be used to investigate the neural circuitry of motor coordination. The presence of disparate muscle networks across frequencies suggests that the neuromuscular system is organized into a multiplex network allowing for parallel and hierarchical control structures.

  15. Constructing an Intelligent Patent Network Analysis Method

    OpenAIRE

    Chao-Chan Wu; Ching-Bang Yao

    2012-01-01

    Patent network analysis, an advanced method of patent analysis, is a useful tool for technology management. This method visually displays all the relationships among the patents and enables the analysts to intuitively comprehend the overview of a set of patents in the field of the technology being studied. Although patent network analysis possesses relative advantages different from traditional methods of patent analysis, it is subject to several crucial limitations. To overcome the drawbacks...

  16. Semantic web for integrated network analysis in biomedicine.

    Science.gov (United States)

    Chen, Huajun; Ding, Li; Wu, Zhaohui; Yu, Tong; Dhanapalan, Lavanya; Chen, Jake Y

    2009-03-01

    The Semantic Web technology enables integration of heterogeneous data on the World Wide Web by making the semantics of data explicit through formal ontologies. In this article, we survey the feasibility and state of the art of utilizing the Semantic Web technology to represent, integrate and analyze the knowledge in various biomedical networks. We introduce a new conceptual framework, semantic graph mining, to enable researchers to integrate graph mining with ontology reasoning in network data analysis. Through four case studies, we demonstrate how semantic graph mining can be applied to the analysis of disease-causal genes, Gene Ontology category cross-talks, drug efficacy analysis and herb-drug interactions analysis.

  17. G-computation demonstration in causal mediation analysis.

    Science.gov (United States)

    Wang, Aolin; Arah, Onyebuchi A

    2015-10-01

    Recent work has considerably advanced the definition, identification and estimation of controlled direct, and natural direct and indirect effects in causal mediation analysis. Despite the various estimation methods and statistical routines being developed, a unified approach for effect estimation under different effect decomposition scenarios is still needed for epidemiologic research. G-computation offers such unification and has been used for total effect and joint controlled direct effect estimation settings, involving different types of exposure and outcome variables. In this study, we demonstrate the utility of parametric g-computation in estimating various components of the total effect, including (1) natural direct and indirect effects, (2) standard and stochastic controlled direct effects, and (3) reference and mediated interaction effects, using Monte Carlo simulations in standard statistical software. For each study subject, we estimated their nested potential outcomes corresponding to the (mediated) effects of an intervention on the exposure wherein the mediator was allowed to attain the value it would have under a possible counterfactual exposure intervention, under a pre-specified distribution of the mediator independent of any causes, or under a fixed controlled value. A final regression of the potential outcome on the exposure intervention variable was used to compute point estimates and bootstrap was used to obtain confidence intervals. Through contrasting different potential outcomes, this analytical framework provides an intuitive way of estimating effects under the recently introduced 3- and 4-way effect decomposition. This framework can be extended to complex multivariable and longitudinal mediation settings.

  18. Majorana Demonstrator Bolted Joint Mechanical and Thermal Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Aguayo Navarrete, Estanislao; Reid, Douglas J.; Fast, James E.

    2012-06-01

    The MAJORANA DEMONSTRATOR is designed to probe for neutrinoless double-beta decay, an extremely rare process with a half-life in the order of 1026 years. The experiment uses an ultra-low background, high-purity germanium detector array. The germanium crystals are both the source and the detector in this experiment. Operating these crystals as ionizing radiation detectors requires having them under cryogenic conditions (below 90 K). A liquid nitrogen thermosyphon is used to extract the heat from the detectors. The detector channels are arranged in strings and thermally coupled to the thermosyphon through a cold plate. The cold plate is joined to the thermosyphon by a bolted joint. This circular plate is housed inside the cryostat can. This document provides a detailed study of the bolted joint that connects the cold plate and the thermosyphon. An analysis of the mechanical and thermal properties of this bolted joint is presented. The force applied to the joint is derived from the torque applied to each one of the six bolts that form the joint. The thermal conductivity of the joint is measured as a function of applied force. The required heat conductivity for a successful experiment is the combination of the thermal conductivity of the detector string and this joint. The thermal behavior of the joint is experimentally implemented and analyzed in this study.

  19. SAVANT: Solar Array Verification and Analysis Tool Demonstrated

    Science.gov (United States)

    Chock, Ricaurte

    2000-01-01

    The photovoltaics (PV) industry is now being held to strict specifications, such as end-oflife power requirements, that force them to overengineer their products to avoid contractual penalties. Such overengineering has been the only reliable way to meet such specifications. Unfortunately, it also results in a more costly process than is probably necessary. In our conversations with the PV industry, the issue of cost has been raised again and again. Consequently, the Photovoltaics and Space Environment Effects branch at the NASA Glenn Research Center at Lewis Field has been developing a software tool to address this problem. SAVANT, Glenn's tool for solar array verification and analysis is in the technology demonstration phase. Ongoing work has proven that more efficient and less costly PV designs should be possible by using SAVANT to predict the on-orbit life-cycle performance. The ultimate goal of the SAVANT project is to provide a user-friendly computer tool to predict PV on-orbit life-cycle performance. This should greatly simplify the tasks of scaling and designing the PV power component of any given flight or mission. By being able to predict how a particular PV article will perform, designers will be able to balance mission power requirements (both beginning-of-life and end-of-life) with survivability concerns such as power degradation due to radiation and/or contamination. Recent comparisons with actual flight data from the Photovoltaic Array Space Power Plus Diagnostics (PASP Plus) mission validate this approach.

  20. Experimental demonstration of the OQAM-OFDM-based wavelength stacked passive optical networks

    Science.gov (United States)

    Bi, Meihua; Zhang, Lu; Liu, Ling; Yang, Guowei; Zeng, Ran; Xiao, Shilin; Li, Zhengxuan; Song, Yingxiong

    2017-07-01

    We demonstrate a wavelength stacked passive optical network (PON) with offset quadrature amplitude modulation based orthogonal frequency division multiplexing (OQAM-OFDM), which can provide 100-km single mode fiber (SMF) transmission without any inline repeater amplifier for both downlink and uplink. By experiment, we verify the feasibility of this proposed PON system for bi-directional long distance transmission especially for asynchronous upstream. Experimental result shows that, negligible power penalty is achieved even with 100-km SMF transmission, and 3.6-dB sensitivity improvement is obtained when compared to OFDM-based asynchronous system. Besides, the performance in terms of side-lode suppression and peak to average power ratio (PAPR) are also contrastively analyzed between OFDM and OQAM-OFDM-based PON system.

  1. Weighted Complex Network Analysis of Pakistan Highways

    Directory of Open Access Journals (Sweden)

    Yasir Tariq Mohmand

    2013-01-01

    Full Text Available The structure and properties of public transportation networks have great implications in urban planning, public policies, and infectious disease control. This study contributes a weighted complex network analysis of travel routes on the national highway network of Pakistan. The network is responsible for handling 75 percent of the road traffic yet is largely inadequate, poor, and unreliable. The highway network displays small world properties and is assortative in nature. Based on the betweenness centrality of the nodes, the most important cities are identified as this could help in identifying the potential congestion points in the network. Keeping in view the strategic location of Pakistan, such a study is of practical importance and could provide opportunities for policy makers to improve the performance of the highway network.

  2. Predictive structural dynamic network analysis.

    Science.gov (United States)

    Chen, Rong; Herskovits, Edward H

    2015-04-30

    Classifying individuals based on magnetic resonance data is an important task in neuroscience. Existing brain network-based methods to classify subjects analyze data from a cross-sectional study and these methods cannot classify subjects based on longitudinal data. We propose a network-based predictive modeling method to classify subjects based on longitudinal magnetic resonance data. Our method generates a dynamic Bayesian network model for each group which represents complex spatiotemporal interactions among brain regions, and then calculates a score representing that subject's deviation from expected network patterns. This network-derived score, along with other candidate predictors, are used to construct predictive models. We validated the proposed method based on simulated data and the Alzheimer's Disease Neuroimaging Initiative study. For the Alzheimer's Disease Neuroimaging Initiative study, we built a predictive model based on the baseline biomarker characterizing the baseline state and the network-based score which was constructed based on the state transition probability matrix. We found that this combined model achieved 0.86 accuracy, 0.85 sensitivity, and 0.87 specificity. For the Alzheimer's Disease Neuroimaging Initiative study, the model based on the baseline biomarkers achieved 0.77 accuracy. The accuracy of our model is significantly better than the model based on the baseline biomarkers (p-value=0.002). We have presented a method to classify subjects based on structural dynamic network model based scores. This method is of great importance to distinguish subjects based on structural network dynamics and the understanding of the network architecture of brain processes and disorders. Copyright © 2015 Elsevier B.V. All rights reserved.

  3. First demonstration of single-mode MCF transport network with crosstalk-aware in-service optical channel control

    DEFF Research Database (Denmark)

    Pulverer, K.; Tanaka, T.; Häbel, U.

    2017-01-01

    We demonstrate the first crosstalk-aware traffic engineering as a use case in a multicore fibre transport network. With the help of a software-defined network controller, modulation format and channel route are adaptively changed using programmable devices with XT monitors....

  4. Demonstration of Single-Mode Multicore Fiber Transport Network with Crosstalk-Aware In-Service Optical Path Control

    DEFF Research Database (Denmark)

    Tanaka, Takafumi; Pulverer, Klaus; Häbel, Ulrich

    2017-01-01

    transport network testbed and demonstrate an XT-aware traffic engineering scenario. With the help of a software-defined network (SDN) controller, the modulation format and optical path route are adaptively changed based on the monitored XT values by using programmable devices such as a real-time transponder...

  5. NEAT: an efficient network enrichment analysis test.

    Science.gov (United States)

    Signorelli, Mirko; Vinciotti, Veronica; Wit, Ernst C

    2016-09-05

    Network enrichment analysis is a powerful method, which allows to integrate gene enrichment analysis with the information on relationships between genes that is provided by gene networks. Existing tests for network enrichment analysis deal only with undirected networks, they can be computationally slow and are based on normality assumptions. We propose NEAT, a test for network enrichment analysis. The test is based on the hypergeometric distribution, which naturally arises as the null distribution in this context. NEAT can be applied not only to undirected, but to directed and partially directed networks as well. Our simulations indicate that NEAT is considerably faster than alternative resampling-based methods, and that its capacity to detect enrichments is at least as good as the one of alternative tests. We discuss applications of NEAT to network analyses in yeast by testing for enrichment of the Environmental Stress Response target gene set with GO Slim and KEGG functional gene sets, and also by inspecting associations between functional sets themselves. NEAT is a flexible and efficient test for network enrichment analysis that aims to overcome some limitations of existing resampling-based tests. The method is implemented in the R package neat, which can be freely downloaded from CRAN ( https://cran.r-project.org/package=neat ).

  6. Reaction network analysis in biochemical signaling pathways

    OpenAIRE

    Martinez-Forero, I. (Iván); Pelaez, A. (Antonio); Villoslada, P. (Pablo)

    2010-01-01

    The aim of this thesis is to improve the understanding of signaling pathways through a theoretical study of chemical reaction networks. The equilibirum solution to the equations derived from chemical networks will be analytically resolved using tools from algebraic geometry. The chapters are organized as follows: 1. An introduction to chemical dynamics in biological systems with a special emphasis on steady state analysis 2. Complete description of the chemical reaction network theor...

  7. GRETNA: a graph theoretical network analysis toolbox for imaging connectomics

    Directory of Open Access Journals (Sweden)

    Jinhui eWang

    2015-06-01

    Full Text Available Recent studies have suggested that the brain’s structural and functional networks (i.e., connectomics can be constructed by various imaging technologies (e.g., EEG/MEG; structural, diffusion and functional MRI and further characterized by graph theory. Given the huge complexity of network construction, analysis and statistics, toolboxes incorporating these functions are largely lacking. Here, we developed the GRaph thEoreTical Network Analysis (GRETNA toolbox for imaging connectomics. The GRETNA contains several key features as follows: (i an open-source, Matlab-based, cross-platform (Windows and UNIX OS package with a graphical user interface; (ii allowing topological analyses of global and local network properties with parallel computing ability, independent of imaging modality and species; (iii providing flexible manipulations in several key steps during network construction and analysis, which include network node definition, network connectivity processing, network type selection and choice of thresholding procedure; (iv allowing statistical comparisons of global, nodal and connectional network metrics and assessments of relationship between these network metrics and clinical or behavioral variables of interest; and (v including functionality in image preprocessing and network construction based on resting-state functional MRI (R-fMRI data. After applying the GRETNA to a publicly released R-fMRI dataset of 54 healthy young adults, we demonstrated that human brain functional networks exhibit efficient small-world, assortative, hierarchical and modular organizations and possess highly connected hubs and that these findings are robust against different analytical strategies. With these efforts, we anticipate that GRETNA will accelerate imaging connectomics in an easy, quick and flexible manner. GRETNA is freely available on the NITRC website (http://www.nitrc.org/projects/gretna/.

  8. GRETNA: a graph theoretical network analysis toolbox for imaging connectomics.

    Science.gov (United States)

    Wang, Jinhui; Wang, Xindi; Xia, Mingrui; Liao, Xuhong; Evans, Alan; He, Yong

    2015-01-01

    Recent studies have suggested that the brain's structural and functional networks (i.e., connectomics) can be constructed by various imaging technologies (e.g., EEG/MEG; structural, diffusion and functional MRI) and further characterized by graph theory. Given the huge complexity of network construction, analysis and statistics, toolboxes incorporating these functions are largely lacking. Here, we developed the GRaph thEoreTical Network Analysis (GRETNA) toolbox for imaging connectomics. The GRETNA contains several key features as follows: (i) an open-source, Matlab-based, cross-platform (Windows and UNIX OS) package with a graphical user interface (GUI); (ii) allowing topological analyses of global and local network properties with parallel computing ability, independent of imaging modality and species; (iii) providing flexible manipulations in several key steps during network construction and analysis, which include network node definition, network connectivity processing, network type selection and choice of thresholding procedure; (iv) allowing statistical comparisons of global, nodal and connectional network metrics and assessments of relationship between these network metrics and clinical or behavioral variables of interest; and (v) including functionality in image preprocessing and network construction based on resting-state functional MRI (R-fMRI) data. After applying the GRETNA to a publicly released R-fMRI dataset of 54 healthy young adults, we demonstrated that human brain functional networks exhibit efficient small-world, assortative, hierarchical and modular organizations and possess highly connected hubs and that these findings are robust against different analytical strategies. With these efforts, we anticipate that GRETNA will accelerate imaging connectomics in an easy, quick and flexible manner. GRETNA is freely available on the NITRC website.

  9. Network Reconstruction and Systems Analysis of Cardiac Myocyte Hypertrophy Signaling*

    Science.gov (United States)

    Ryall, Karen A.; Holland, David O.; Delaney, Kyle A.; Kraeutler, Matthew J.; Parker, Audrey J.; Saucerman, Jeffrey J.

    2012-01-01

    Cardiac hypertrophy is managed by a dense web of signaling pathways with many pathways influencing myocyte growth. A quantitative understanding of the contributions of individual pathways and their interactions is needed to better understand hypertrophy signaling and to develop more effective therapies for heart failure. We developed a computational model of the cardiac myocyte hypertrophy signaling network to determine how the components and network topology lead to differential regulation of transcription factors, gene expression, and myocyte size. Our computational model of the hypertrophy signaling network contains 106 species and 193 reactions, integrating 14 established pathways regulating cardiac myocyte growth. 109 of 114 model predictions were validated using published experimental data testing the effects of receptor activation on transcription factors and myocyte phenotypic outputs. Network motif analysis revealed an enrichment of bifan and biparallel cross-talk motifs. Sensitivity analysis was used to inform clustering of the network into modules and to identify species with the greatest effects on cell growth. Many species influenced hypertrophy, but only a few nodes had large positive or negative influences. Ras, a network hub, had the greatest effect on cell area and influenced more species than any other protein in the network. We validated this model prediction in cultured cardiac myocytes. With this integrative computational model, we identified the most influential species in the cardiac hypertrophy signaling network and demonstrate how different levels of network organization affect myocyte size, transcription factors, and gene expression. PMID:23091058

  10. Industrial entrepreneurial network: Structural and functional analysis

    Science.gov (United States)

    Medvedeva, M. A.; Davletbaev, R. H.; Berg, D. B.; Nazarova, J. J.; Parusheva, S. S.

    2016-12-01

    Structure and functioning of two model industrial entrepreneurial networks are investigated in the present paper. One of these networks is forming when implementing an integrated project and consists of eight agents, which interact with each other and external environment. The other one is obtained from the municipal economy and is based on the set of the 12 real business entities. Analysis of the networks is carried out on the basis of the matrix of mutual payments aggregated over the certain time period. The matrix is created by the methods of experimental economics. Social Network Analysis (SNA) methods and instruments were used in the present research. The set of basic structural characteristics was investigated: set of quantitative parameters such as density, diameter, clustering coefficient, different kinds of centrality, and etc. They were compared with the random Bernoulli graphs of the corresponding size and density. Discovered variations of random and entrepreneurial networks structure are explained by the peculiarities of agents functioning in production network. Separately, were identified the closed exchange circuits (cyclically closed contours of graph) forming an autopoietic (self-replicating) network pattern. The purpose of the functional analysis was to identify the contribution of the autopoietic network pattern in its gross product. It was found that the magnitude of this contribution is more than 20%. Such value allows using of the complementary currency in order to stimulate economic activity of network agents.

  11. 3rd International Conference on Network Analysis

    CERN Document Server

    Kalyagin, Valery; Pardalos, Panos

    2014-01-01

    This volume compiles the major results of conference participants from the "Third International Conference in Network Analysis" held at the Higher School of Economics, Nizhny Novgorod in May 2013, with the aim to initiate further joint research among different groups. The contributions in this book cover a broad range of topics relevant to the theory and practice of network analysis, including the reliability of complex networks, software, theory, methodology, and applications.  Network analysis has become a major research topic over the last several years. The broad range of applications that can be described and analyzed by means of a network has brought together researchers, practitioners from numerous fields such as operations research, computer science, transportation, energy, biomedicine, computational neuroscience and social sciences. In addition, new approaches and computer environments such as parallel computing, grid computing, cloud computing, and quantum computing have helped to solve large scale...

  12. The human functional brain network demonstrates structural and dynamical resilience to targeted attack.

    Science.gov (United States)

    Joyce, Karen E; Hayasaka, Satoru; Laurienti, Paul J

    2013-01-01

    In recent years, the field of network science has enabled researchers to represent the highly complex interactions in the brain in an approachable yet quantitative manner. One exciting finding since the advent of brain network research was that the brain network can withstand extensive damage, even to highly connected regions. However, these highly connected nodes may not be the most critical regions of the brain network, and it is unclear how the network dynamics are impacted by removal of these key nodes. This work seeks to further investigate the resilience of the human functional brain network. Network attack experiments were conducted on voxel-wise functional brain networks and region-of-interest (ROI) networks of 5 healthy volunteers. Networks were attacked at key nodes using several criteria for assessing node importance, and the impact on network structure and dynamics was evaluated. The findings presented here echo previous findings that the functional human brain network is highly resilient to targeted attacks, both in terms of network structure and dynamics.

  13. The human functional brain network demonstrates structural and dynamical resilience to targeted attack.

    Directory of Open Access Journals (Sweden)

    Karen E Joyce

    Full Text Available In recent years, the field of network science has enabled researchers to represent the highly complex interactions in the brain in an approachable yet quantitative manner. One exciting finding since the advent of brain network research was that the brain network can withstand extensive damage, even to highly connected regions. However, these highly connected nodes may not be the most critical regions of the brain network, and it is unclear how the network dynamics are impacted by removal of these key nodes. This work seeks to further investigate the resilience of the human functional brain network. Network attack experiments were conducted on voxel-wise functional brain networks and region-of-interest (ROI networks of 5 healthy volunteers. Networks were attacked at key nodes using several criteria for assessing node importance, and the impact on network structure and dynamics was evaluated. The findings presented here echo previous findings that the functional human brain network is highly resilient to targeted attacks, both in terms of network structure and dynamics.

  14. Social network analysis in medical education.

    Science.gov (United States)

    Isba, Rachel; Woolf, Katherine; Hanneman, Robert

    2017-01-01

    Humans are fundamentally social beings. The social systems within which we live our lives (families, schools, workplaces, professions, friendship groups) have a significant influence on our health, success and well-being. These groups can be characterised as networks and analysed using social network analysis. Social network analysis is a mainly quantitative method for analysing how relationships between individuals form and affect those individuals, but also how individual relationships build up into wider social structures that influence outcomes at a group level. Recent increases in computational power have increased the accessibility of social network analysis methods for application to medical education research. Social network analysis has been used to explore team-working, social influences on attitudes and behaviours, the influence of social position on individual success, and the relationship between social cohesion and power. This makes social network analysis theories and methods relevant to understanding the social processes underlying academic performance, workplace learning and policy-making and implementation in medical education contexts. Social network analysis is underused in medical education, yet it is a method that could yield significant insights that would improve experiences and outcomes for medical trainees and educators, and ultimately for patients. © 2016 John Wiley & Sons Ltd and The Association for the Study of Medical Education.

  15. Detecting Distributed Network Traffic Anomaly with Network-Wide Correlation Analysis

    Science.gov (United States)

    Zonglin, Li; Guangmin, Hu; Xingmiao, Yao; Dan, Yang

    2008-12-01

    Distributed network traffic anomaly refers to a traffic abnormal behavior involving many links of a network and caused by the same source (e.g., DDoS attack, worm propagation). The anomaly transiting in a single link might be unnoticeable and hard to detect, while the anomalous aggregation from many links can be prevailing, and does more harm to the networks. Aiming at the similar features of distributed traffic anomaly on many links, this paper proposes a network-wide detection method by performing anomalous correlation analysis of traffic signals' instantaneous parameters. In our method, traffic signals' instantaneous parameters are firstly computed, and their network-wide anomalous space is then extracted via traffic prediction. Finally, an anomaly is detected by a global correlation coefficient of anomalous space. Our evaluation using Abilene traffic traces demonstrates the excellent performance of this approach for distributed traffic anomaly detection.

  16. Detecting Distributed Network Traffic Anomaly with Network-Wide Correlation Analysis

    Directory of Open Access Journals (Sweden)

    Yang Dan

    2008-12-01

    Full Text Available Distributed network traffic anomaly refers to a traffic abnormal behavior involving many links of a network and caused by the same source (e.g., DDoS attack, worm propagation. The anomaly transiting in a single link might be unnoticeable and hard to detect, while the anomalous aggregation from many links can be prevailing, and does more harm to the networks. Aiming at the similar features of distributed traffic anomaly on many links, this paper proposes a network-wide detection method by performing anomalous correlation analysis of traffic signals' instantaneous parameters. In our method, traffic signals' instantaneous parameters are firstly computed, and their network-wide anomalous space is then extracted via traffic prediction. Finally, an anomaly is detected by a global correlation coefficient of anomalous space. Our evaluation using Abilene traffic traces demonstrates the excellent performance of this approach for distributed traffic anomaly detection.

  17. Dynamic social network analysis using conversational dynamics in social networking and microblogging environments

    Science.gov (United States)

    Stocco, Gabriel; Savell, Robert; Cybenko, George

    2010-04-01

    In many security environments, the textual content of communications may be unavailable. In these instances, it is often desirable to infer the status of the network and its component entities from patterns of communication flow. Conversational dynamics among entities in the network may provide insight into important aspects of the underlying social network such as the formational dynamics of group structures, the active state of these groups, individuals' roles within groups, and the likelihood of individual participation in conversations. To gain insight into the use of conversational dynamics to facilitate Dynamic Social Network Analysis, we explore the use of interevent timings to associate entities in the Twitter social networking and micro-blogging environment. Specifically, we use message timings to establish inter-nodal relationships among participants. In addition, we demonstrate a new visualization technique for tracking levels of coordination or synchronization within the community via measures of socio-temporal coherence of the participants.

  18. Analysis of complex networks using aggressive abstraction.

    Energy Technology Data Exchange (ETDEWEB)

    Colbaugh, Richard; Glass, Kristin.; Willard, Gerald

    2008-10-01

    This paper presents a new methodology for analyzing complex networks in which the network of interest is first abstracted to a much simpler (but equivalent) representation, the required analysis is performed using the abstraction, and analytic conclusions are then mapped back to the original network and interpreted there. We begin by identifying a broad and important class of complex networks which admit abstractions that are simultaneously dramatically simplifying and property preserving we call these aggressive abstractions -- and which can therefore be analyzed using the proposed approach. We then introduce and develop two forms of aggressive abstraction: 1.) finite state abstraction, in which dynamical networks with uncountable state spaces are modeled using finite state systems, and 2.) onedimensional abstraction, whereby high dimensional network dynamics are captured in a meaningful way using a single scalar variable. In each case, the property preserving nature of the abstraction process is rigorously established and efficient algorithms are presented for computing the abstraction. The considerable potential of the proposed approach to complex networks analysis is illustrated through case studies involving vulnerability analysis of technological networks and predictive analysis for social processes.

  19. Social Network Analysis and Critical Realism

    DEFF Research Database (Denmark)

    Buch-Hansen, Hubert

    2014-01-01

    Social network analysis ( SNA) is an increasingly popular approach that provides researchers with highly developed tools to map and analyze complexes of social relations. Although a number of network scholars have explicated the assumptions that underpin SNA, the approach has yet to be discussed ...

  20. Service network design of bike sharing systems analysis and optimization

    CERN Document Server

    Vogel, Patrick

    2016-01-01

    This monograph presents a tactical planning approach for service network design in metropolitan areas. Designing the service network requires the suitable aggregation of demand data as well as the anticipation of operational relocation decisions. To this end, an integrated approach of data analysis and mathematical optimization is introduced. The book also includes a case study based on real-world data to demonstrate the benefit of the proposed service network design approach. The target audience comprises primarily research experts in the field of traffic engineering, but the book may also be beneficial for graduate students.

  1. An Evaluation and Demonstration of a Network Based Aircraft Telemetry System

    Science.gov (United States)

    Waldersen, Matt; Schnarr, Otto, III

    2017-01-01

    The primary topics of this presentation describe the testing of network based telemetry and RF modulation techniques. The overall intend is to aid the aerospace industry in transitioning to a network based telemetry system.

  2. National Marine Sanctuaries as Sentinel Sites for a Demonstration Marine Biodiversity Observation Network (MBON)

    Science.gov (United States)

    Chavez, F.; Montes, E.; Muller-Karger, F. E.; Gittings, S.; Canonico, G.; Kavanaugh, M.; Iken, K.; Miller, R. J.; Duffy, J. E.; Miloslavich, P.

    2016-12-01

    The U.S. Federal government (NOAA, NASA, BOEM, and the Smithsonian Institution), academic researchers, and private partners in the U.S. and around the world are working on the design and implementation of a Marine Biodiversity Observation Network (MBON). The program is being coordinated internationally with the Group on Earth Observations (GEO BON) and two key Intergovernmental Oceanographic Commission (IOC) programs, namely the Global Ocean Observing System (GOOS) and the Ocean Biogeographic Information System (OBIS). The goal is to monitor changes in marine biodiversity within various geographic settings. In the U.S., demonstration projects include four National Marine Sanctuaries (NMS): Florida Keys, Monterey Bay, Flower Garden Banks, and Channel Islands. The Smithsonian is implementing several programs around the world under the Marine Global Earth Observatory (MarineGEO) partnership, directed by the Smithsonian's Tennenbaum Marine Observatories Network (TMON). The overarching goal is to observe and understand life, from microbes to whales, in different coastal and continental shelf habitats, and its role in maintaining resilient ecosystems. The project also seeks to determine biodiversity baselines in these ecosystems based on time-series observations to assess changes in populations and overall biodiversity over time. Efforts are being made to engage with various countries in the Americas to participate in an MBON Pole to Pole in the Americas initiative proposed by Mexico. We are looking to have other regions organized to conduct similar planning efforts. The present MBON pilot projects encompass a range of marine environments, including deep sea, continental shelves, and coastal habitats including estuaries, wetlands, and coral reefs. The MBON will facilitate and enable regional biodiversity assessments, and contributes to addressing several U.N. Sustainable Development Goals to conserve and sustainably use marine resources, and provide a means for countries

  3. CERN is first to demonstrate a 10 Gigabit/sec network

    CERN Document Server

    CERN Press Office. Geneva

    2000-01-01

    CERN* has made another important step forward in high-speed computing and state of the art networking. On 15 September a Gigabyte System Network (GSN) network with a capacity of 10 Gbit per second ramped up successfully at CERN, connecting together computers from different computer companies (Compaq, IBM, SGI and Sun).

  4. Robust flux balance analysis of multiscale biochemical reaction networks.

    Science.gov (United States)

    Sun, Yuekai; Fleming, Ronan M T; Thiele, Ines; Saunders, Michael A

    2013-07-30

    Biological processes such as metabolism, signaling, and macromolecular synthesis can be modeled as large networks of biochemical reactions. Large and comprehensive networks, like integrated networks that represent metabolism and macromolecular synthesis, are inherently multiscale because reaction rates can vary over many orders of magnitude. They require special methods for accurate analysis because naive use of standard optimization systems can produce inaccurate or erroneously infeasible results. We describe techniques enabling off-the-shelf optimization software to compute accurate solutions to the poorly scaled optimization problems arising from flux balance analysis of multiscale biochemical reaction networks. We implement lifting techniques for flux balance analysis within the openCOBRA toolbox and demonstrate our techniques using the first integrated reconstruction of metabolism and macromolecular synthesis for E. coli. Our techniques enable accurate flux balance analysis of multiscale networks using off-the-shelf optimization software. Although we describe lifting techniques in the context of flux balance analysis, our methods can be used to handle a variety of optimization problems arising from analysis of multiscale network reconstructions.

  5. Spectrum-Based and Collaborative Network Topology Analysis and Visualization

    Science.gov (United States)

    Hu, Xianlin

    2013-01-01

    Networks are of significant importance in many application domains, such as World Wide Web and social networks, which often embed rich topological information. Since network topology captures the organization of network nodes and links, studying network topology is very important to network analysis. In this dissertation, we study networks by…

  6. Complex Network Analysis of Guangzhou Metro

    Directory of Open Access Journals (Sweden)

    Yasir Tariq Mohmand

    2015-11-01

    Full Text Available The structure and properties of public transportation networks can provide suggestions for urban planning and public policies. This study contributes a complex network analysis of the Guangzhou metro. The metro network has 236 kilometers of track and is the 6th busiest metro system of the world. In this paper topological properties of the network are explored. We observed that the network displays small world properties and is assortative in nature. The network possesses a high average degree of 17.5 with a small diameter of 5. Furthermore, we also identified the most important metro stations based on betweenness and closeness centralities. These could help in identifying the probable congestion points in the metro system and provide policy makers with an opportunity to improve the performance of the metro system.

  7. Extending Stochastic Network Calculus to Loss Analysis

    Directory of Open Access Journals (Sweden)

    Chao Luo

    2013-01-01

    Full Text Available Loss is an important parameter of Quality of Service (QoS. Though stochastic network calculus is a very useful tool for performance evaluation of computer networks, existing studies on stochastic service guarantees mainly focused on the delay and backlog. Some efforts have been made to analyse loss by deterministic network calculus, but there are few results to extend stochastic network calculus for loss analysis. In this paper, we introduce a new parameter named loss factor into stochastic network calculus and then derive the loss bound through the existing arrival curve and service curve via this parameter. We then prove that our result is suitable for the networks with multiple input flows. Simulations show the impact of buffer size, arrival traffic, and service on the loss factor.

  8. Constructing an Intelligent Patent Network Analysis Method

    Directory of Open Access Journals (Sweden)

    Chao-Chan Wu

    2012-11-01

    Full Text Available Patent network analysis, an advanced method of patent analysis, is a useful tool for technology management. This method visually displays all the relationships among the patents and enables the analysts to intuitively comprehend the overview of a set of patents in the field of the technology being studied. Although patent network analysis possesses relative advantages different from traditional methods of patent analysis, it is subject to several crucial limitations. To overcome the drawbacks of the current method, this study proposes a novel patent analysis method, called the intelligent patent network analysis method, to make a visual network with great precision. Based on artificial intelligence techniques, the proposed method provides an automated procedure for searching patent documents, extracting patent keywords, and determining the weight of each patent keyword in order to generate a sophisticated visualization of the patent network. This study proposes a detailed procedure for generating an intelligent patent network that is helpful for improving the efficiency and quality of patent analysis. Furthermore, patents in the field of Carbon Nanotube Backlight Unit (CNT-BLU were analyzed to verify the utility of the proposed method.

  9. Statistical Analysis of Bus Networks in India.

    Science.gov (United States)

    Chatterjee, Atanu; Manohar, Manju; Ramadurai, Gitakrishnan

    2016-01-01

    In this paper, we model the bus networks of six major Indian cities as graphs in L-space, and evaluate their various statistical properties. While airline and railway networks have been extensively studied, a comprehensive study on the structure and growth of bus networks is lacking. In India, where bus transport plays an important role in day-to-day commutation, it is of significant interest to analyze its topological structure and answer basic questions on its evolution, growth, robustness and resiliency. Although the common feature of small-world property is observed, our analysis reveals a wide spectrum of network topologies arising due to significant variation in the degree-distribution patterns in the networks. We also observe that these networks although, robust and resilient to random attacks are particularly degree-sensitive. Unlike real-world networks, such as Internet, WWW and airline, that are virtual, bus networks are physically constrained. Our findings therefore, throw light on the evolution of such geographically and constrained networks that will help us in designing more efficient bus networks in the future.

  10. Social network analysis for program implementation.

    Science.gov (United States)

    Valente, Thomas W; Palinkas, Lawrence A; Czaja, Sara; Chu, Kar-Hai; Brown, C Hendricks

    2015-01-01

    This paper introduces the use of social network analysis theory and tools for implementation research. The social network perspective is useful for understanding, monitoring, influencing, or evaluating the implementation process when programs, policies, practices, or principles are designed and scaled up or adapted to different settings. We briefly describe common barriers to implementation success and relate them to the social networks of implementation stakeholders. We introduce a few simple measures commonly used in social network analysis and discuss how these measures can be used in program implementation. Using the four stage model of program implementation (exploration, adoption, implementation, and sustainment) proposed by Aarons and colleagues [1] and our experience in developing multi-sector partnerships involving community leaders, organizations, practitioners, and researchers, we show how network measures can be used at each stage to monitor, intervene, and improve the implementation process. Examples are provided to illustrate these concepts. We conclude with expected benefits and challenges associated with this approach.

  11. Multilayer motif analysis of brain networks

    Science.gov (United States)

    Battiston, Federico; Nicosia, Vincenzo; Chavez, Mario; Latora, Vito

    2017-04-01

    In the last decade, network science has shed new light both on the structural (anatomical) and on the functional (correlations in the activity) connectivity among the different areas of the human brain. The analysis of brain networks has made possible to detect the central areas of a neural system and to identify its building blocks by looking at overabundant small subgraphs, known as motifs. However, network analysis of the brain has so far mainly focused on anatomical and functional networks as separate entities. The recently developed mathematical framework of multi-layer networks allows us to perform an analysis of the human brain where the structural and functional layers are considered together. In this work, we describe how to classify the subgraphs of a multiplex network, and we extend the motif analysis to networks with an arbitrary number of layers. We then extract multi-layer motifs in brain networks of healthy subjects by considering networks with two layers, anatomical and functional, respectively, obtained from diffusion and functional magnetic resonance imaging. Results indicate that subgraphs in which the presence of a physical connection between brain areas (links at the structural layer) coexists with a non-trivial positive correlation in their activities are statistically overabundant. Finally, we investigate the existence of a reinforcement mechanism between the two layers by looking at how the probability to find a link in one layer depends on the intensity of the connection in the other one. Showing that functional connectivity is non-trivially constrained by the underlying anatomical network, our work contributes to a better understanding of the interplay between the structure and function in the human brain.

  12. NEXCADE: perturbation analysis for complex networks.

    Directory of Open Access Journals (Sweden)

    Gitanjali Yadav

    Full Text Available Recent advances in network theory have led to considerable progress in our understanding of complex real world systems and their behavior in response to external threats or fluctuations. Much of this research has been invigorated by demonstration of the 'robust, yet fragile' nature of cellular and large-scale systems transcending biology, sociology, and ecology, through application of the network theory to diverse interactions observed in nature such as plant-pollinator, seed-dispersal agent and host-parasite relationships. In this work, we report the development of NEXCADE, an automated and interactive program for inducing disturbances into complex systems defined by networks, focusing on the changes in global network topology and connectivity as a function of the perturbation. NEXCADE uses a graph theoretical approach to simulate perturbations in a user-defined manner, singly, in clusters, or sequentially. To demonstrate the promise it holds for broader adoption by the research community, we provide pre-simulated examples from diverse real-world networks including eukaryotic protein-protein interaction networks, fungal biochemical networks, a variety of ecological food webs in nature as well as social networks. NEXCADE not only enables network visualization at every step of the targeted attacks, but also allows risk assessment, i.e. identification of nodes critical for the robustness of the system of interest, in order to devise and implement context-based strategies for restructuring a network, or to achieve resilience against link or node failures. Source code and license for the software, designed to work on a Linux-based operating system (OS can be downloaded at http://www.nipgr.res.in/nexcade_download.html. In addition, we have developed NEXCADE as an OS-independent online web server freely available to the scientific community without any login requirement at http://www.nipgr.res.in/nexcade.html.

  13. A Network Text Analysis of David Ayer’s Fury

    Directory of Open Access Journals (Sweden)

    Starling David Hunter

    2015-12-01

    Full Text Available Network Text Analysis (NTA involves the creation of networks of words and/or concepts from linguistic data. Its key insight is that the position of words and concepts in a text network provides vital clues to the central and underlying themes of the text as a whole. Recent research has relied on inductive approaches to identify these themes. In this study we demonstrate a deductive approach that we apply to the screenplay of the 2014 World War II-era film Fury. Specifically, we first use genre expectations theory to establish prior expectations as to the key themes associated with war films. We then empirically test whether words and concepts associated with the most influentially-positioned nodes are consistent with themes common to the war-film genre. As predicted, we find that words and concepts associated with the least constrained nodes in the text network were significantly more likely to be associated with the war, action, and biography genres and significantly less likely to be associated with the mystery, science-fiction, fantasy, and film-noir genres. Keywords: content analysis, text analysis, network text analysis, semantic network analysis, film studies, screenplay, screenwriting, war movies, World War II, tanks

  14. Biofuel transportation analysis tool : description, methodology, and demonstration scenarios

    Science.gov (United States)

    2014-01-01

    This report describes a Biofuel Transportation Analysis Tool (BTAT), developed by the U.S. Department of Transportation (DOT) Volpe National Transportation Systems Center (Volpe) in support of the Department of Defense (DOD) Office of Naval Research ...

  15. 1st International Conference on Network Analysis

    CERN Document Server

    Kalyagin, Valery; Pardalos, Panos

    2013-01-01

    This volume contains a selection of contributions from the "First International Conference in Network Analysis," held at the University of Florida, Gainesville, on December 14-16, 2011. The remarkable diversity of fields that take advantage of Network Analysis makes the endeavor of gathering up-to-date material in a single compilation a useful, yet very difficult, task. The purpose of this volume is to overcome this difficulty by collecting the major results found by the participants and combining them in one easily accessible compilation. Network analysis has become a major research topic over the last several years. The broad range of applications that can be described and analyzed by means of a network is bringing together researchers, practitioners and other scientific communities from numerous fields such as Operations Research, Computer Science, Transportation, Energy, Social Sciences, and more. The contributions not only come from different fields, but also cover a broad range of topics relevant to the...

  16. Adaptive management of the Great Barrier Reef: a globally significant demonstration of the benefits of networks of marine reserves.

    Science.gov (United States)

    McCook, Laurence J; Ayling, Tony; Cappo, Mike; Choat, J Howard; Evans, Richard D; De Freitas, Debora M; Heupel, Michelle; Hughes, Terry P; Jones, Geoffrey P; Mapstone, Bruce; Marsh, Helene; Mills, Morena; Molloy, Fergus J; Pitcher, C Roland; Pressey, Robert L; Russ, Garry R; Sutton, Stephen; Sweatman, Hugh; Tobin, Renae; Wachenfeld, David R; Williamson, David H

    2010-10-26

    The Great Barrier Reef (GBR) provides a globally significant demonstration of the effectiveness of large-scale networks of marine reserves in contributing to integrated, adaptive management. Comprehensive review of available evidence shows major, rapid benefits of no-take areas for targeted fish and sharks, in both reef and nonreef habitats, with potential benefits for fisheries as well as biodiversity conservation. Large, mobile species like sharks benefit less than smaller, site-attached fish. Critically, reserves also appear to benefit overall ecosystem health and resilience: outbreaks of coral-eating, crown-of-thorns starfish appear less frequent on no-take reefs, which consequently have higher abundance of coral, the very foundation of reef ecosystems. Effective marine reserves require regular review of compliance: fish abundances in no-entry zones suggest that even no-take zones may be significantly depleted due to poaching. Spatial analyses comparing zoning with seabed biodiversity or dugong distributions illustrate significant benefits from application of best-practice conservation principles in data-poor situations. Increases in the marine reserve network in 2004 affected fishers, but preliminary economic analysis suggests considerable net benefits, in terms of protecting environmental and tourism values. Relative to the revenue generated by reef tourism, current expenditure on protection is minor. Recent implementation of an Outlook Report provides regular, formal review of environmental condition and management and links to policy responses, key aspects of adaptive management. Given the major threat posed by climate change, the expanded network of marine reserves provides a critical and cost-effective contribution to enhancing the resilience of the Great Barrier Reef.

  17. An examination of the relationship between athlete leadership and cohesion using social network analysis.

    Science.gov (United States)

    Loughead, Todd M; Fransen, Katrien; Van Puyenbroeck, Stef; Hoffmann, Matt D; De Cuyper, Bert; Vanbeselaere, Norbert; Boen, Filip

    2016-11-01

    Two studies investigated the structure of different athlete leadership networks and its relationship to cohesion using social network analysis. In Study 1, we examined the relationship between a general leadership quality network and task and social cohesion as measured by the Group Environment Questionnaire (GEQ). In Study 2, we investigated the leadership networks for four different athlete leadership roles (task, motivational, social and external) and their association with task and social cohesion networks. In Study 1, the results demonstrated that the general leadership quality network was positively related to task and social cohesion. The results from Study 2 indicated positive correlations between the four leadership networks and task and social cohesion networks. Further, the motivational leadership network emerged as the strongest predictor of the task cohesion network, while the social leadership network was the strongest predictor of the social cohesion network. The results complement a growing body of research indicating that athlete leadership has a positive association with cohesion.

  18. Global Inventory and Analysis of Smart Grid Demonstration Projects

    Energy Technology Data Exchange (ETDEWEB)

    Mulder, W.; Kumpavat, K.; Faasen, C.; Verheij, F.; Vaessen, P [DNV KEMA Energy and Sustainability, Arnhem (Netherlands)

    2012-10-15

    As the key enabler of a more sustainable, economical and reliable energy system, the development of smart grids has received a great deal of attention in recent times. In many countries around the world the benefits of such a system have begun to be investigated through a number of demonstration projects. With such a vast array of projects it can be difficult to keep track of changes, and to understand which best practices are currently available with regard to smart grids. This report aims to address these issues through providing a comprehensive outlook on the current status of smart grid projects worldwide.

  19. Network Anomaly Detection Based on Wavelet Analysis

    Directory of Open Access Journals (Sweden)

    Ali A. Ghorbani

    2008-11-01

    Full Text Available Signal processing techniques have been applied recently for analyzing and detecting network anomalies due to their potential to find novel or unknown intrusions. In this paper, we propose a new network signal modelling technique for detecting network anomalies, combining the wavelet approximation and system identification theory. In order to characterize network traffic behaviors, we present fifteen features and use them as the input signals in our system. We then evaluate our approach with the 1999 DARPA intrusion detection dataset and conduct a comprehensive analysis of the intrusions in the dataset. Evaluation results show that the approach achieves high-detection rates in terms of both attack instances and attack types. Furthermore, we conduct a full day's evaluation in a real large-scale WiFi ISP network where five attack types are successfully detected from over 30 millions flows.

  20. Study of co-authorship network of papers in the Journal of Research in Medical Sciences using social network analysis

    Directory of Open Access Journals (Sweden)

    Firoozeh Zare-Farashbandi

    2014-01-01

    Full Text Available Background: Co-authorship is one of the most tangible forms of research collaboration. A co-authorship network is a social network in which the authors through participation in one or more publication through an indirect path have linked to each other. The present research using the social network analysis studied co-authorship network of 681 articles published in Journal of Research in Medical Sciences (JRMS during 2008-2012. Materials and Methods: The study was carried out with the scientometrics approach and using co-authorship network analysis of authors. The topology of the co-authorship network of 681 published articles in JRMS between 2008 and 2012 was analyzed using macro-level metrics indicators of network analysis such as density, clustering coefficient, components and mean distance. In addition, in order to evaluate the performance of each authors and countries in the network, the micro-level indicators such as degree centrality, closeness centrality and betweenness centrality as well as productivity index were used. The UCINET and NetDraw softwares were used to draw and analyze the co-authorship network of the papers. Results: The assessment of the authors productivity in this journal showed that the first ranks were belonged to only five authors, respectively. Furthermore, analysis of the co-authorship of the authors in the network demonstrated that in the betweenness centrality index, three authors of them had the good position in the network. They can be considered as the network leaders able to control the flow of information in the network compared with the other members based on the shortest paths. On the other hand, the key role of the network according to the productivity and centrality indexes was belonged to Iran, Malaysia and United States of America. Conclusion: Co-authorship network of JRMS has the characteristics of a small world network. In addition, the theory of 6° separation is valid in this network was also true.

  1. Characteristics of networks in energy efficiency research, development and demonstration – a comparison of actors, technological domains and network structure in seven research areas

    DEFF Research Database (Denmark)

    Ruby, Tobias Møller

    2013-01-01

    - but there is no such thing as “just” RD&D in energy efficiency as it encompasses a multitude of different sub-areas, institutions, actors, markets etc. Through the use of network analysis on unique RD&D project data from Denmark the study provides new insights into knowledge and inter-organisational networks in energy...

  2. Architecture Design and Experimental Platform Demonstration of Optical Network based on OpenFlow Protocol

    Science.gov (United States)

    Xing, Fangyuan; Wang, Honghuan; Yin, Hongxi; Li, Ming; Luo, Shenzi; Wu, Chenguang

    2016-02-01

    With the extensive application of cloud computing and data centres, as well as the constantly emerging services, the big data with the burst characteristic has brought huge challenges to optical networks. Consequently, the software defined optical network (SDON) that combines optical networks with software defined network (SDN), has attracted much attention. In this paper, an OpenFlow-enabled optical node employed in optical cross-connect (OXC) and reconfigurable optical add/drop multiplexer (ROADM), is proposed. An open source OpenFlow controller is extended on routing strategies. In addition, the experiment platform based on OpenFlow protocol for software defined optical network, is designed. The feasibility and availability of the OpenFlow-enabled optical nodes and the extended OpenFlow controller are validated by the connectivity test, protection switching and load balancing experiments in this test platform.

  3. Social network analysis applied to team sports analysis

    CERN Document Server

    Clemente, Filipe Manuel; Mendes, Rui Sousa

    2016-01-01

    Explaining how graph theory and social network analysis can be applied to team sports analysis, This book presents useful approaches, models and methods that can be used to characterise the overall properties of team networks and identify the prominence of each team player. Exploring the different possible network metrics that can be utilised in sports analysis, their possible applications and variances from situation to situation, the respective chapters present an array of illustrative case studies. Identifying the general concepts of social network analysis and network centrality metrics, readers are shown how to generate a methodological protocol for data collection. As such, the book provides a valuable resource for students of the sport sciences, sports engineering, applied computation and the social sciences.

  4. Network graph analysis of category fluency testing.

    Science.gov (United States)

    Lerner, Alan J; Ogrocki, Paula K; Thomas, Peter J

    2009-03-01

    Category fluency is impaired early in Alzheimer disease (AD). Graph theory is a technique to analyze complex relationships in networks. Features of interest in network analysis include the number of nodes and edges, and variables related to their interconnectedness. Other properties important in network analysis are "small world properties" and "scale-free" properties. The small world property (popularized as the so-called "6 degrees of separation") arises when the majority of connections are local, but a number of connections are to distant nodes. Scale-free networks are characterized by the presence of a few nodes with many connections, and many more nodes with fewer connections. To determine if category fluency data can be analyzed using graph theory. To compare normal elderly, mild cognitive impairment (MCI) and AD network graphs, and characterize changes seen with increasing cognitive impairment. Category fluency results ("animals" recorded over 60 s) from normals (n=38), MCI (n=33), and AD (n=40) completing uniform data set evaluations were converted to network graphs of all unique cooccurring neighbors, and compared for network variables. For Normal, MCI and AD, mean clustering coefficients were 0.21, 0.22, 0.30; characteristic path lengths were 3.27, 3.17, and 2.65; small world properties decreased with increasing cognitive impairment, and all graphs showed scale-free properties. Rank correlations of the 25 commonest items ranged from 0.75 to 0.83. Filtering of low-degree nodes in normal and MCI graphs resulted in properties similar to the AD network graph. Network graph analysis is a promising technique for analyzing changes in category fluency. Our technique results in nonrandom graphs consistent with well-characterized properties for these types of graphs.

  5. Performance Analysis of 3G Communication Network

    Directory of Open Access Journals (Sweden)

    Toni Anwar

    2013-09-01

    Full Text Available In this project, third generation (3G technologies research had been carried out to design and optimization conditions for 3G network. The 3G wireless mobile communication networks are growing at an ever faster rate, and this is likely to continue in the foreseeable future. Some services such as e-mail, web browsing etc allow the transition of the network from circuit switched to packet switched operation, resulting in increased overall network performance. Higher reliability, better coverage and services, higher capacity, mobility management, and wireless multimedia are all parts of the network performance. Throughput and spectral efficiency are fundamental parameters in capacity planning for 3G cellular network deployments. This project investigates also the downlink (DL and uplink (UL throughput and spectral efficiency performance of the standard Universal Mobile Telecommunications system (UMTS system for different scenarios of user and different technologies. Power consumption comparison for different mobile technology is also discussed. The analysis can significantly help system engineers to obtain crucial performance characteristics of 3G network. At the end of the paper, coverage area of 3G from one of the mobile network in Malaysia is presented.

  6. Medical image analysis with artificial neural networks.

    Science.gov (United States)

    Jiang, J; Trundle, P; Ren, J

    2010-12-01

    Given that neural networks have been widely reported in the research community of medical imaging, we provide a focused literature survey on recent neural network developments in computer-aided diagnosis, medical image segmentation and edge detection towards visual content analysis, and medical image registration for its pre-processing and post-processing, with the aims of increasing awareness of how neural networks can be applied to these areas and to provide a foundation for further research and practical development. Representative techniques and algorithms are explained in detail to provide inspiring examples illustrating: (i) how a known neural network with fixed structure and training procedure could be applied to resolve a medical imaging problem; (ii) how medical images could be analysed, processed, and characterised by neural networks; and (iii) how neural networks could be expanded further to resolve problems relevant to medical imaging. In the concluding section, a highlight of comparisons among many neural network applications is included to provide a global view on computational intelligence with neural networks in medical imaging. Copyright © 2010 Elsevier Ltd. All rights reserved.

  7. Fast network centrality analysis using GPUs

    Directory of Open Access Journals (Sweden)

    Shi Zhiao

    2011-05-01

    Full Text Available Abstract Background With the exploding volume of data generated by continuously evolving high-throughput technologies, biological network analysis problems are growing larger in scale and craving for more computational power. General Purpose computation on Graphics Processing Units (GPGPU provides a cost-effective technology for the study of large-scale biological networks. Designing algorithms that maximize data parallelism is the key in leveraging the power of GPUs. Results We proposed an efficient data parallel formulation of the All-Pairs Shortest Path problem, which is the key component for shortest path-based centrality computation. A betweenness centrality algorithm built upon this formulation was developed and benchmarked against the most recent GPU-based algorithm. Speedup between 11 to 19% was observed in various simulated scale-free networks. We further designed three algorithms based on this core component to compute closeness centrality, eccentricity centrality and stress centrality. To make all these algorithms available to the research community, we developed a software package gpu-fan (GPU-based Fast Analysis of Networks for CUDA enabled GPUs. Speedup of 10-50× compared with CPU implementations was observed for simulated scale-free networks and real world biological networks. Conclusions gpu-fan provides a significant performance improvement for centrality computation in large-scale networks. Source code is available under the GNU Public License (GPL at http://bioinfo.vanderbilt.edu/gpu-fan/.

  8. Demonstrating Change with Astronaut Photography Using Object Based Image Analysis

    Science.gov (United States)

    Hollier, Andi; Jagge, Amy

    2017-01-01

    Every day, hundreds of images of Earth flood the Crew Earth Observations database as astronauts use hand held digital cameras to capture spectacular frames from the International Space Station. The variety of resolutions and perspectives provide a template for assessing land cover change over decades. We will focus on urban growth in the second fastest growing city in the nation, Houston, TX, using Object-Based Image Analysis. This research will contribute to the land change science community, integrated resource planning, and monitoring of the rapid rate of urban sprawl.

  9. Sensitivity analysis of linear programming problem through a recurrent neural network

    Science.gov (United States)

    Das, Raja

    2017-11-01

    In this paper we study the recurrent neural network for solving linear programming problems. To achieve optimality in accuracy and also in computational effort, an algorithm is presented. We investigate the sensitivity analysis of linear programming problem through the neural network. A detailed example is also presented to demonstrate the performance of the recurrent neural network.

  10. Using Granular-Evidence-Based Adaptive Networks for Sensitivity Analysis

    OpenAIRE

    Vališevskis, A.

    2002-01-01

    This paper considers the possibility of using adaptive networks for sensitivity analysis. Adaptive network that processes fuzzy granules is described. The adaptive network training algorithm can be used for sensitivity analysis of decision making models. Furthermore, a case study concerning sensitivity analysis is described, which shows in what way the adaptive network can be used for sensitivity analysis.

  11. Using Network Analysis to Understand Knowledge Mobilization in a Community-based Organization.

    Science.gov (United States)

    Gainforth, Heather L; Latimer-Cheung, Amy E; Moore, Spencer; Athanasopoulos, Peter; Martin Ginis, Kathleen A

    2015-06-01

    Knowledge mobilization (KM) has been described as putting research in the hands of research users. Network analysis is an empirical approach that has potential for examining the complex process of knowledge mobilization within community-based organizations (CBOs). Yet, conducting a network analysis in a CBO presents challenges. The purpose of this paper is to demonstrate the value and feasibility of using network analysis as a method for understanding knowledge mobilization within a CBO by (1) presenting challenges and solutions to conducting a network analysis in a CBO, (2) examining the feasibility of our methodology, and (3) demonstrating the utility of this methodology through an example of a network analysis conducted in a CBO engaging in knowledge mobilization activities. The final method used by the partnership team to conduct our network analysis of a CBO is described. An example of network analysis results of a CBO engaging in knowledge mobilization is presented. In total, 81 participants completed the network survey. All of the feasibility benchmarks set by the CBO were met. Results of the network analysis are highlighted and discussed as a means of identifying (1) prominent and influential individuals in the knowledge mobilization process and (2) areas for improvement in future knowledge mobilization initiatives. Findings demonstrate that network analysis can be feasibly used to provide a rich description of a CBO engaging in knowledge mobilization activities.

  12. Analysis of the experimental positron lifetime spectra by neural networks

    Directory of Open Access Journals (Sweden)

    Avdić Senada

    2003-01-01

    Full Text Available This paper deals with the analysis of experimental positron lifetime spectra in polymer materials by using various algorithms of neural networks. A method based on the use of artificial neural networks for unfolding the mean lifetime and intensity of the spectral components of simulated positron lifetime spectra was previously suggested and tested on simulated data [Pžzsitetal, Applied Surface Science, 149 (1998, 97]. In this work, the applicability of the method to the analysis of experimental positron spectra has been verified in the case of spectra from polymer materials with three components. It has been demonstrated that the backpropagation neural network can determine the spectral parameters with a high accuracy and perform the decomposi-tion of lifetimes which differ by 10% or more. The backpropagation network has not been suitable for the identification of both the parameters and the number of spectral components. Therefore, a separate artificial neural network module has been designed to solve the classification problem. Module types based on self-organizing map and learning vector quantization algorithms have been tested. The learning vector quantization algorithm was found to have better performance and reliability. A complete artificial neural network analysis tool of positron lifetime spectra has been constructed to include a spectra classification module and parameter evaluation modules for spectra with a different number of components. In this way, both flexibility and high resolution can be achieved.

  13. Experimental Demonstration of a Cognitive Optical Network for Reduction of Restoration Time

    DEFF Research Database (Denmark)

    Kachris, Christoforos; Klonidis, Dimitris; Francescon, Antonio

    2014-01-01

    This paper presents the implementation and performance evaluation of a cognitive heterogeneous optical network testbed. The testbed integrates the CMP, the data plane and the cognitive system and reduces by 48% the link restoration time.......This paper presents the implementation and performance evaluation of a cognitive heterogeneous optical network testbed. The testbed integrates the CMP, the data plane and the cognitive system and reduces by 48% the link restoration time....

  14. Experimental Demonstration of Mixed Formats and Bit Rates Signal Allocation for Spectrum-flexible Optical Networking

    DEFF Research Database (Denmark)

    Borkowski, Robert; Karinou, Fotini; Angelou, Marianna

    2012-01-01

    We report on an extensive experimental study for adaptive allocation of 16-QAM and QPSK signals inside spectrum flexible heterogeneous superchannel. Physical-layer performance parameters are extracted for use in resource allocation mechanisms of future flexible networks.......We report on an extensive experimental study for adaptive allocation of 16-QAM and QPSK signals inside spectrum flexible heterogeneous superchannel. Physical-layer performance parameters are extracted for use in resource allocation mechanisms of future flexible networks....

  15. Molecular analysis to demonstrate that odontogenic keratocysts are neoplastic.

    Science.gov (United States)

    Agaram, Narasimhan P; Collins, Bobby M; Barnes, Leon; Lomago, Deren; Aldeeb, Dalal; Swalsky, Patricia; Finkelstein, Sydney; Hunt, Jennifer L

    2004-03-01

    Odontogenic keratocysts (OKCs) are unique odontogenic lesions that have the potential to behave aggressively, that can recur, and that can be associated with the nevoid basal cell carcinoma syndrome. Whether they are developmental or neoplastic continues to be debated. To identify loss of heterozygosity of tumor suppressor genes in OKCs and to suggest a pathogenetic origin for these lesions. We examined 10 OKCs for loss of heterozygosity of tumor suppressor genes, using a microdissection and semiquantitative genotyping analysis. The genes analyzed included 10 common tumor suppressor genes, as well as the PTCH gene, which is mutated in nevoid basal cell carcinoma syndrome. Loss of heterozygosity was seen in 7 of 10 cases, with a frequency between 11% and 80% of the genes studied. The genes that exhibited the most frequent allelic losses were p16, p53, PTCH, and MCC (75%, 66%, 60%, and 60%, respectively). Daughter cysts were associated with a higher frequency of allelic loss (P =.02), but epithelial budding was not. Our study indicates that a significant number of OKCs show clonal loss of heterozygosity of common tumor suppressor genes. The finding of clonal deletion mutations of genomic DNA in these cysts supports the hypothesis that they are neoplastic rather than developmental in origin.

  16. Geospatial analysis of food environment demonstrates associations with gestational diabetes.

    Science.gov (United States)

    Kahr, Maike K; Suter, Melissa A; Ballas, Jerasimos; Ramin, Susan M; Monga, Manju; Lee, Wesley; Hu, Min; Shope, Cindy D; Chesnokova, Arina; Krannich, Laura; Griffin, Emily N; Mastrobattista, Joan; Dildy, Gary A; Strehlow, Stacy L; Ramphul, Ryan; Hamilton, Winifred J; Aagaard, Kjersti M

    2016-01-01

    Gestational diabetes mellitus (GDM) is one of most common complications of pregnancy, with incidence rates varying by maternal age, race/ethnicity, obesity, parity, and family history. Given its increasing prevalence in recent decades, covariant environmental and sociodemographic factors may be additional determinants of GDM occurrence. We hypothesized that environmental risk factors, in particular measures of the food environment, may be a diabetes contributor. We employed geospatial modeling in a populous US county to characterize the association of the relative availability of fast food restaurants and supermarkets to GDM. Utilizing a perinatal database with >4900 encoded antenatal and outcome variables inclusive of ZIP code data, 8912 consecutive pregnancies were analyzed for correlations between GDM and food environment based on countywide food permit registration data. Linkage between pregnancies and food environment was achieved on the basis of validated 5-digit ZIP code data. The prevalence of supermarkets and fast food restaurants per 100,000 inhabitants for each ZIP code were gathered from publicly available food permit sources. To independently authenticate our findings with objective data, we measured hemoglobin A1c levels as a function of geospatial distribution of food environment in a matched subset (n = 80). Residence in neighborhoods with a high prevalence of fast food restaurants (fourth quartile) was significantly associated with an increased risk of developing GDM (relative to first quartile: adjusted odds ratio, 1.63; 95% confidence interval, 1.21-2.19). In multivariate analysis, this association held true after controlling for potential confounders (P = .002). Measurement of hemoglobin A1c levels in a matched subset were significantly increased in association with residence in a ZIP code with a higher fast food/supermarket ratio (n = 80, r = 0.251 P food environment and risk for gestational diabetes was identified. Copyright © 2016

  17. Influence Activation Model: A New Perspective in Social Influence Analysis and Social Network Evolution

    CERN Document Server

    Yang, Yang; Lichtenwalter, Ryan N; Dong, Yuxiao

    2016-01-01

    What drives the propensity for the social network dynamics? Social influence is believed to drive both off-line and on-line human behavior, however it has not been considered as a driver of social network evolution. Our analysis suggest that, while the network structure affects the spread of influence in social networks, the network is in turn shaped by social influence activity (i.e., the process of social influence wherein one person's attitudes and behaviors affect another's). To that end, we develop a novel model of network evolution where the dynamics of network follow the mechanism of influence propagation, which are not captured by the existing network evolution models. Our experiments confirm the predictions of our model and demonstrate the important role that social influence can play in the process of network evolution. As well exploring the reason of social network evolution, different genres of social influence have been spotted having different effects on the network dynamics. These findings and ...

  18. Semantic network analysis of vaccine sentiment in online social media.

    Science.gov (United States)

    Kang, Gloria J; Ewing-Nelson, Sinclair R; Mackey, Lauren; Schlitt, James T; Marathe, Achla; Abbas, Kaja M; Swarup, Samarth

    2017-06-22

    To examine current vaccine sentiment on social media by constructing and analyzing semantic networks of vaccine information from highly shared websites of Twitter users in the United States; and to assist public health communication of vaccines. Vaccine hesitancy continues to contribute to suboptimal vaccination coverage in the United States, posing significant risk of disease outbreaks, yet remains poorly understood. We constructed semantic networks of vaccine information from internet articles shared by Twitter users in the United States. We analyzed resulting network topology, compared semantic differences, and identified the most salient concepts within networks expressing positive, negative, and neutral vaccine sentiment. The semantic network of positive vaccine sentiment demonstrated greater cohesiveness in discourse compared to the larger, less-connected network of negative vaccine sentiment. The positive sentiment network centered around parents and focused on communicating health risks and benefits, highlighting medical concepts such as measles, autism, HPV vaccine, vaccine-autism link, meningococcal disease, and MMR vaccine. In contrast, the negative network centered around children and focused on organizational bodies such as CDC, vaccine industry, doctors, mainstream media, pharmaceutical companies, and United States. The prevalence of negative vaccine sentiment was demonstrated through diverse messaging, framed around skepticism and distrust of government organizations that communicate scientific evidence supporting positive vaccine benefits. Semantic network analysis of vaccine sentiment in online social media can enhance understanding of the scope and variability of current attitudes and beliefs toward vaccines. Our study synthesizes quantitative and qualitative evidence from an interdisciplinary approach to better understand complex drivers of vaccine hesitancy for public health communication, to improve vaccine confidence and vaccination coverage

  19. Social network analysis of study environment

    Directory of Open Access Journals (Sweden)

    Blaženka Divjak

    2010-06-01

    Full Text Available Student working environment influences student learning and achievement level. In this respect social aspects of students’ formal and non-formal learning play special role in learning environment. The main research problem of this paper is to find out if students' academic performance influences their position in different students' social networks. Further, there is a need to identify other predictors of this position. In the process of problem solving we use the Social Network Analysis (SNA that is based on the data we collected from the students at the Faculty of Organization and Informatics, University of Zagreb. There are two data samples: in the basic sample N=27 and in the extended sample N=52. We collected data on social-demographic position, academic performance, learning and motivation styles, student status (full-time/part-time, attitudes towards individual and teamwork as well as informal cooperation. Afterwards five different networks (exchange of learning materials, teamwork, informal communication, basic and aggregated social network were constructed. These networks were analyzed with different metrics and the most important were betweenness, closeness and degree centrality. The main result is, firstly, that the position in a social network cannot be forecast only by academic success and, secondly, that part-time students tend to form separate groups that are poorly connected with full-time students. In general, position of a student in social networks in study environment can influence student learning as well as her/his future employability and therefore it is worthwhile to be investigated.

  20. Tensor Fusion Network for Multimodal Sentiment Analysis

    OpenAIRE

    Zadeh, Amir; Chen, Minghai; Poria, Soujanya; Cambria, Erik; Morency, Louis-Philippe

    2017-01-01

    Multimodal sentiment analysis is an increasingly popular research area, which extends the conventional language-based definition of sentiment analysis to a multimodal setup where other relevant modalities accompany language. In this paper, we pose the problem of multimodal sentiment analysis as modeling intra-modality and inter-modality dynamics. We introduce a novel model, termed Tensor Fusion Network, which learns both such dynamics end-to-end. The proposed approach is tailored for the vola...

  1. Network analysis of eight industrial symbiosis systems

    Science.gov (United States)

    Zhang, Yan; Zheng, Hongmei; Shi, Han; Yu, Xiangyi; Liu, Gengyuan; Su, Meirong; Li, Yating; Chai, Yingying

    2016-06-01

    Industrial symbiosis is the quintessential characteristic of an eco-industrial park. To divide parks into different types, previous studies mostly focused on qualitative judgments, and failed to use metrics to conduct quantitative research on the internal structural or functional characteristics of a park. To analyze a park's structural attributes, a range of metrics from network analysis have been applied, but few researchers have compared two or more symbioses using multiple metrics. In this study, we used two metrics (density and network degree centralization) to compare the degrees of completeness and dependence of eight diverse but representative industrial symbiosis networks. Through the combination of the two metrics, we divided the networks into three types: weak completeness, and two forms of strong completeness, namely "anchor tenant" mutualism and "equality-oriented" mutualism. The results showed that the networks with a weak degree of completeness were sparse and had few connections among nodes; for "anchor tenant" mutualism, the degree of completeness was relatively high, but the affiliated members were too dependent on core members; and the members in "equality-oriented" mutualism had equal roles, with diverse and flexible symbiotic paths. These results revealed some of the systems' internal structure and how different structures influenced the exchanges of materials, energy, and knowledge among members of a system, thereby providing insights into threats that may destabilize the network. Based on this analysis, we provide examples of the advantages and effectiveness of recent improvement projects in a typical Chinese eco-industrial park (Shandong Lubei).

  2. Automated Analysis of Security in Networking Systems

    DEFF Research Database (Denmark)

    Buchholtz, Mikael

    2004-01-01

    It has for a long time been a challenge to built secure networking systems. One way to counter this problem is to provide developers of software applications for networking systems with easy-to-use tools that can check security properties before the applications ever reach the marked. These tools...... will both help raise the general level of awareness of the problems and prevent the most basic flaws from occurring. This thesis contributes to the development of such tools. Networking systems typically try to attain secure communication by applying standard cryptographic techniques. In this thesis...... attacks, and attacks launched by insiders. Finally, the perspectives for the application of the analysis techniques are discussed, thereby, coming a small step closer to providing developers with easy- to-use tools for validating the security of networking applications....

  3. A statistical analysis of UK financial networks

    Science.gov (United States)

    Chu, J.; Nadarajah, S.

    2017-04-01

    In recent years, with a growing interest in big or large datasets, there has been a rise in the application of large graphs and networks to financial big data. Much of this research has focused on the construction and analysis of the network structure of stock markets, based on the relationships between stock prices. Motivated by Boginski et al. (2005), who studied the characteristics of a network structure of the US stock market, we construct network graphs of the UK stock market using same method. We fit four distributions to the degree density of the vertices from these graphs, the Pareto I, Fréchet, lognormal, and generalised Pareto distributions, and assess the goodness of fit. Our results show that the degree density of the complements of the market graphs, constructed using a negative threshold value close to zero, can be fitted well with the Fréchet and lognormal distributions.

  4. Visualization and Analysis of Complex Covert Networks

    DEFF Research Database (Denmark)

    Memon, Bisharat

    This report discusses and summarize the results of my work so far in relation to my Ph.D. project entitled "Visualization and Analysis of Complex Covert Networks". The focus of my research is primarily on development of methods and supporting tools for visualization and analysis of networked...... systems that are covert and hence inherently complex. My Ph.D. is positioned within the wider framework of CrimeFighter project. The framework envisions a number of key knowledge management processes that are involved in the workflow, and the toolbox provides supporting tools to assist human end...

  5. In silico Biochemical Reaction Network Analysis (IBRENA): a package for simulation and analysis of reaction networks.

    Science.gov (United States)

    Liu, Gang; Neelamegham, Sriram

    2008-04-15

    We present In silico Biochemical Reaction Network Analysis (IBRENA), a software package which facilitates multiple functions including cellular reaction network simulation and sensitivity analysis (both forward and adjoint methods), coupled with principal component analysis, singular-value decomposition and model reduction. The software features a graphical user interface that aids simulation and plotting of in silico results. While the primary focus is to aid formulation, testing and reduction of theoretical biochemical reaction networks, the program can also be used for analysis of high-throughput genomic and proteomic data. The software package, manual and examples are available at http://www.eng.buffalo.edu/~neel/ibrena

  6. Using Network Analysis to Understand Knowledge Mobilization in a Community-based Organization

    OpenAIRE

    Gainforth, Heather L.; Latimer-Cheung, Amy E.; Moore, Spencer; Athanasopoulos, Peter; Martin Ginis, Kathleen A.

    2014-01-01

    Background Knowledge mobilization (KM) has been described as putting research in the hands of research users. Network analysis is an empirical approach that has potential for examining the complex process of knowledge mobilization within community-based organizations (CBOs). Yet, conducting a network analysis in a CBO presents challenges. Purpose The purpose of this paper is to demonstrate the value and feasibility of using network analysis as a method for understanding knowledge mob...

  7. Emulation Platform for Cyber Analysis of Wireless Communication Network Protocols

    Energy Technology Data Exchange (ETDEWEB)

    Van Leeuwen, Brian P. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Eldridge, John M. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2017-11-01

    Wireless networking and mobile communications is increasing around the world and in all sectors of our lives. With increasing use, the density and complexity of the systems increase with more base stations and advanced protocols to enable higher data throughputs. The security of data transported over wireless networks must also evolve with the advances in technologies enabling more capable wireless networks. However, means for analysis of the effectiveness of security approaches and implementations used on wireless networks are lacking. More specifically a capability to analyze the lower-layer protocols (i.e., Link and Physical layers) is a major challenge. An analysis approach that incorporates protocol implementations without the need for RF emissions is necessary. In this research paper several emulation tools and custom extensions that enable an analysis platform to perform cyber security analysis of lower layer wireless networks is presented. A use case of a published exploit in the 802.11 (i.e., WiFi) protocol family is provided to demonstrate the effectiveness of the described emulation platform.

  8. Capturing complexity: Mixing methods in the analysis of a European tobacco control policy network.

    Science.gov (United States)

    Weishaar, Heide; Amos, Amanda; Collin, Jeff

    Social network analysis (SNA), a method which can be used to explore networks in various contexts, has received increasing attention. Drawing on the development of European smoke-free policy, this paper explores how a mixed method approach to SNA can be utilised to investigate a complex policy network. Textual data from public documents, consultation submissions and websites were extracted, converted and analysed using plagiarism detection software and quantitative network analysis, and qualitative data from public documents and 35 interviews were thematically analysed. While the quantitative analysis enabled understanding of the network's structure and components, the qualitative analysis provided in-depth information about specific actors' positions, relationships and interactions. The paper establishes that SNA is suited to empirically testing and analysing networks in EU policymaking. It contributes to methodological debates about the antagonism between qualitative and quantitative approaches and demonstrates that qualitative and quantitative network analysis can offer a powerful tool for policy analysis.

  9. Organizational network analysis for two networks in the Washington State Department of Transportation.

    Science.gov (United States)

    2010-10-01

    Organizational network analysis (ONA) consists of gathering data on information sharing and : connectivity in a group, calculating network measures, creating network maps, and using this : information to analyze and improve the functionality of the g...

  10. Developing an intelligence analysis process through social network analysis

    Science.gov (United States)

    Waskiewicz, Todd; LaMonica, Peter

    2008-04-01

    Intelligence analysts are tasked with making sense of enormous amounts of data and gaining an awareness of a situation that can be acted upon. This process can be extremely difficult and time consuming. Trying to differentiate between important pieces of information and extraneous data only complicates the problem. When dealing with data containing entities and relationships, social network analysis (SNA) techniques can be employed to make this job easier. Applying network measures to social network graphs can identify the most significant nodes (entities) and edges (relationships) and help the analyst further focus on key areas of concern. Strange developed a model that identifies high value targets such as centers of gravity and critical vulnerabilities. SNA lends itself to the discovery of these high value targets and the Air Force Research Laboratory (AFRL) has investigated several network measures such as centrality, betweenness, and grouping to identify centers of gravity and critical vulnerabilities. Using these network measures, a process for the intelligence analyst has been developed to aid analysts in identifying points of tactical emphasis. Organizational Risk Analyzer (ORA) and Terrorist Modus Operandi Discovery System (TMODS) are the two applications used to compute the network measures and identify the points to be acted upon. Therefore, the result of leveraging social network analysis techniques and applications will provide the analyst and the intelligence community with more focused and concentrated analysis results allowing them to more easily exploit key attributes of a network, thus saving time, money, and manpower.

  11. Phylodynamic analysis of a viral infection network

    Directory of Open Access Journals (Sweden)

    Teiichiro eShiino

    2012-07-01

    Full Text Available Viral infections by sexual and droplet transmission routes typically spread through a complex host-to-host contact network. Clarifying the transmission network and epidemiological parameters affecting the variations and dynamics of a specific pathogen is a major issue in the control of infectious diseases. However, conventional methods such as interview and/or classical phylogenetic analysis of viral gene sequences have inherent limitations and often fail to detect infectious clusters and transmission connections. Recent improvements in computational environments now permit the analysis of large datasets. In addition, novel analytical methods have been developed that serve to infer the evolutionary dynamics of virus genetic diversity using sample date information and sequence data. This type of framework, termed phylodynamics, helps connect some of the missing links on viral transmission networks, which are often hard to detect by conventional methods of epidemiology. With sufficient number of sequences available, one can use this new inference method to estimate theoretical epidemiological parameters such as temporal distributions of the primary infection, fluctuation of the pathogen population size, basic reproductive number, and the mean time span of disease infectiousness. Transmission networks estimated by this framework often have the properties of a scale-free network, which are characteristic of infectious and social communication processes. Network analysis based on phylodynamics has alluded to various suggestions concerning the infection dynamics associated with a given community and/or risk behavior. In this review, I will summarize the current methods available for identifying the transmission network using phylogeny, and present an argument on the possibilities of applying the scale-free properties to these existing frameworks.

  12. Classification and Analysis of Computer Network Traffic

    DEFF Research Database (Denmark)

    Bujlow, Tomasz

    2014-01-01

    for traffic classification, which can be used for nearly real-time processing of big amounts of data using affordable CPU and memory resources. Other questions are related to methods for real-time estimation of the application Quality of Service (QoS) level based on the results obtained by the traffic......Traffic monitoring and analysis can be done for multiple different reasons: to investigate the usage of network resources, assess the performance of network applications, adjust Quality of Service (QoS) policies in the network, log the traffic to comply with the law, or create realistic models...... classifier. This thesis is focused on topics connected with traffic classification and analysis, while the work on methods for QoS assessment is limited to defining the connections with the traffic classification and proposing a general algorithm. We introduced the already known methods for traffic...

  13. Bandwidth Analysis of Smart Meter Network Infrastructure

    DEFF Research Database (Denmark)

    Balachandran, Kardi; Olsen, Rasmus Løvenstein; Pedersen, Jens Myrup

    2014-01-01

    Advanced Metering Infrastructure (AMI) is a net-work infrastructure in Smart Grid, which links the electricity customers to the utility company. This network enables smart services by making it possible for the utility company to get an overview of their customers power consumption and also control...... to utilize smart meters and which existing broadband network technologies can facilitate this smart meter service. Initially, scenarios for smart meter infrastructure are identified. The paper defines abstraction models which cover the AMI scenarios. When the scenario has been identified a general overview...... of the bandwidth requirements are analysed. For this analysis the assumptions and limitations are defined. The results obtained by the analysis show, that the amount of data collected and transferred by a smart meter is very low compared to the available bandwidth of most internet connections. The results show...

  14. Demonstration of Self-Training Autonomous Neural Networks in Space Vehicle Docking Simulations

    Science.gov (United States)

    Patrick, M. Clinton; Thaler, Stephen L.; Stevenson-Chavis, Katherine

    2006-01-01

    Neural Networks have been under examination for decades in many areas of research, with varying degrees of success and acceptance. Key goals of computer learning, rapid problem solution, and automatic adaptation have been elusive at best. This paper summarizes efforts at NASA's Marshall Space Flight Center harnessing such technology to autonomous space vehicle docking for the purpose of evaluating applicability to future missions.

  15. Diversity Performance Analysis on Multiple HAP Networks

    Directory of Open Access Journals (Sweden)

    Feihong Dong

    2015-06-01

    Full Text Available One of the main design challenges in wireless sensor networks (WSNs is achieving a high-data-rate transmission for individual sensor devices. The high altitude platform (HAP is an important communication relay platform for WSNs and next-generation wireless networks. Multiple-input multiple-output (MIMO techniques provide the diversity and multiplexing gain, which can improve the network performance effectively. In this paper, a virtual MIMO (V-MIMO model is proposed by networking multiple HAPs with the concept of multiple assets in view (MAV. In a shadowed Rician fading channel, the diversity performance is investigated. The probability density function (PDF and cumulative distribution function (CDF of the received signal-to-noise ratio (SNR are derived. In addition, the average symbol error rate (ASER with BPSK and QPSK is given for the V-MIMO model. The system capacity is studied for both perfect channel state information (CSI and unknown CSI individually. The ergodic capacity with various SNR and Rician factors for different network configurations is also analyzed. The simulation results validate the effectiveness of the performance analysis. It is shown that the performance of the HAPs network in WSNs can be significantly improved by utilizing the MAV to achieve overlapping coverage, with the help of the V-MIMO techniques.

  16. Mixed Methods Analysis of Enterprise Social Networks

    DEFF Research Database (Denmark)

    Behrendt, Sebastian; Richter, Alexander; Trier, Matthias

    2014-01-01

    The increasing use of enterprise social networks (ESN) generates vast amounts of data, giving researchers and managerial decision makers unprecedented opportunities for analysis. However, more transparency about the available data dimensions and how these can be combined is needed to yield accurate...

  17. Nonlinear Time Series Analysis via Neural Networks

    Science.gov (United States)

    Volná, Eva; Janošek, Michal; Kocian, Václav; Kotyrba, Martin

    This article deals with a time series analysis based on neural networks in order to make an effective forex market [Moore and Roche, J. Int. Econ. 58, 387-411 (2002)] pattern recognition. Our goal is to find and recognize important patterns which repeatedly appear in the market history to adapt our trading system behaviour based on them.

  18. Combining morphological analysis and Bayesian networks for ...

    African Journals Online (AJOL)

    Morphological analysis (MA) and Bayesian networks (BN) are two closely related modelling methods, each of which has its advantages and disadvantages for strategic decision support modelling. MA is a method for defining, linking and evaluating problem spaces. BNs are graphical models which consist of a qualitative ...

  19. Models of network reliability analysis, combinatorics, and Monte Carlo

    CERN Document Server

    Gertsbakh, Ilya B

    2009-01-01

    Unique in its approach, Models of Network Reliability: Analysis, Combinatorics, and Monte Carlo provides a brief introduction to Monte Carlo methods along with a concise exposition of reliability theory ideas. From there, the text investigates a collection of principal network reliability models, such as terminal connectivity for networks with unreliable edges and/or nodes, network lifetime distribution in the process of its destruction, network stationary behavior for renewable components, importance measures of network elements, reliability gradient, and network optimal reliability synthesis

  20. Large-Scale Road Network Vulnerability Analysis

    OpenAIRE

    Jenelius, Erik

    2010-01-01

    Disruptions in the transport system can have severe impacts for affected individuals, businesses and the society as a whole. In this research, vulnerability is seen as the risk of unplanned system disruptions, with a focus on large, rare events. Vulnerability analysis aims to provide decision support regarding preventive and restorative actions, ideally as an integrated part of the planning process.The thesis specifically develops the methodology for vulnerability analysis of road networks an...

  1. Computer methods in electric network analysis

    Energy Technology Data Exchange (ETDEWEB)

    Saver, P.; Hajj, I.; Pai, M.; Trick, T.

    1983-06-01

    The computational algorithms utilized in power system analysis have more than just a minor overlap with those used in electronic circuit computer aided design. This paper describes the computer methods that are common to both areas and highlights the differences in application through brief examples. Recognizing this commonality has stimulated the exchange of useful techniques in both areas and has the potential of fostering new approaches to electric network analysis through the interchange of ideas.

  2. Experimental demonstration of multi-dimensional resources integration for service provisioning in cloud radio over fiber network

    Science.gov (United States)

    Yang, Hui; Zhang, Jie; Ji, Yuefeng; He, Yongqi; Lee, Young

    2016-07-01

    Cloud radio access network (C-RAN) becomes a promising scenario to accommodate high-performance services with ubiquitous user coverage and real-time cloud computing in 5G area. However, the radio network, optical network and processing unit cloud have been decoupled from each other, so that their resources are controlled independently. Traditional architecture cannot implement the resource optimization and scheduling for the high-level service guarantee due to the communication obstacle among them with the growing number of mobile internet users. In this paper, we report a study on multi-dimensional resources integration (MDRI) for service provisioning in cloud radio over fiber network (C-RoFN). A resources integrated provisioning (RIP) scheme using an auxiliary graph is introduced based on the proposed architecture. The MDRI can enhance the responsiveness to dynamic end-to-end user demands and globally optimize radio frequency, optical network and processing resources effectively to maximize radio coverage. The feasibility of the proposed architecture is experimentally verified on OpenFlow-based enhanced SDN testbed. The performance of RIP scheme under heavy traffic load scenario is also quantitatively evaluated to demonstrate the efficiency of the proposal based on MDRI architecture in terms of resource utilization, path blocking probability, network cost and path provisioning latency, compared with other provisioning schemes.

  3. Time series analysis of temporal networks

    Science.gov (United States)

    Sikdar, Sandipan; Ganguly, Niloy; Mukherjee, Animesh

    2016-01-01

    A common but an important feature of all real-world networks is that they are temporal in nature, i.e., the network structure changes over time. Due to this dynamic nature, it becomes difficult to propose suitable growth models that can explain the various important characteristic properties of these networks. In fact, in many application oriented studies only knowing these properties is sufficient. For instance, if one wishes to launch a targeted attack on a network, this can be done even without the knowledge of the full network structure; rather an estimate of some of the properties is sufficient enough to launch the attack. We, in this paper show that even if the network structure at a future time point is not available one can still manage to estimate its properties. We propose a novel method to map a temporal network to a set of time series instances, analyze them and using a standard forecast model of time series, try to predict the properties of a temporal network at a later time instance. To our aim, we consider eight properties such as number of active nodes, average degree, clustering coefficient etc. and apply our prediction framework on them. We mainly focus on the temporal network of human face-to-face contacts and observe that it represents a stochastic process with memory that can be modeled as Auto-Regressive-Integrated-Moving-Average (ARIMA). We use cross validation techniques to find the percentage accuracy of our predictions. An important observation is that the frequency domain properties of the time series obtained from spectrogram analysis could be used to refine the prediction framework by identifying beforehand the cases where the error in prediction is likely to be high. This leads to an improvement of 7.96% (for error level ≤20%) in prediction accuracy on an average across all datasets. As an application we show how such prediction scheme can be used to launch targeted attacks on temporal networks. Contribution to the Topical Issue

  4. Demonstration of the feasibility of a complete ellipsometric characterization method based on an artificial neural network.

    Science.gov (United States)

    Battie, Yann; Robert, Stéphane; Gereige, Issam; Jamon, Damien; Stchakovsky, Michel

    2009-10-01

    Ellipsometry is an optical technique that is widely used for determining optical and geometrical properties of optical thin films. These properties are in general extracted from the ellipsometric measurement by solving an inverse problem. Classical methods like the Levenberg-Marquardt algorithm are generally too long, depending on direct calculation and are very sensitive to local minima. In this way, the neural network has proved to be an efficient tool for solving these kinds of problems in a very short time. Indeed, it is rapid and less sensitive to local minima than the classical inversion method. We suggest a complete neural ellipsometric characterization method for determining the index dispersion law and the thickness of a simple SiO(2) or photoresist thin layer on Si, SiO(2), and BK7 substrates. The influence of the training couples on the artificial neural network performance is also discussed.

  5. Social network analysis to cluster sociobibliometric information

    Directory of Open Access Journals (Sweden)

    Jorge Ricardo Vivas

    Full Text Available This paper examines the benefits of using Social Network Analysis in the field of sociobibliometric exploration. There are considered practical and conceptual limits and reaches. The proposal is illustrated through a study about a journals network of behavior modification by Peiró and Carpintero (1981. In this context it is shown the utility of using reticular properties of Density, Centrality, Betweenness, Power and Clusterig as indicators that allow obtaining novel and complementary information to the one extracted by the classic methods of bibliometric exploration.

  6. Capacity analysis of vehicular communication networks

    CERN Document Server

    Lu, Ning

    2013-01-01

    This SpringerBrief focuses on the network capacity analysis of VANETs, a key topic as fundamental guidance on design and deployment of VANETs is very limited. Moreover, unique characteristics of VANETs impose distinguished challenges on such an investigation. This SpringerBrief first introduces capacity scaling laws for wireless networks and briefly reviews the prior arts in deriving the capacity of VANETs. It then studies the unicast capacity considering the socialized mobility model of VANETs. With vehicles communicating based on a two-hop relaying scheme, the unicast capacity bound is deriv

  7. Historical Network Analysis of the Web

    DEFF Research Database (Denmark)

    Brügger, Niels

    2013-01-01

    of the online web has for a number of years gained currency within Internet studies. However, the combination of these two phenomena—historical network analysis of material in web archives—can at best be characterized as an emerging new area of study. Most of the methodological challenges within this new area...... at the Danish parliamentary elections in 2011, 2007, and 2001. As the Internet grows older historical studies of networks on the web will probably become more widespread and therefore it may be about time to begin debating the methodological challenges within this emerging field....

  8. GEOMORPHOLOGIC ANALYSIS OF DRAINAGE NETWORKS ON MARS

    Directory of Open Access Journals (Sweden)

    KERESZTURI ÁKOS

    2012-06-01

    Full Text Available Altogether 327 valleys and their 314 cross-sectional profiles were analyzed on Mars, including width, depth, length, eroded volume, drainage and spatial density, as well as the network structure.According to this systematic analysis, five possible drainage network types were identified such as (a small valleys, (b integrated small valleys, (c individual, medium-sized valleys, (d unconfined,anastomosing outflow valleys, and (e confined outflow valleys. Measuring their various morphometric parameters, these five networks differ from each other in terms of parameters of the eroded volume, drainage density and depth values. This classification is more detailed than those described in the literature previously and correlated to several numerical parameters for the first time.These different types were probably formed during different periods of the evolution of Mars, and sprung from differently localized water sources, and they could be correlated to similar fluvialnetwork types from the Earth.

  9. A network analysis of Sibiu County, Romania

    CERN Document Server

    Grama, Cristina-Nicol

    2013-01-01

    Network science methods have proved to be able to provide useful insights from both a theoretical and a practical point of view in that they can better inform governance policies in complex dynamic environments. The tourism research community has provided an increasing number of works that analyse destinations from a network science perspective. However, most of the studies refer to relatively small samples of actors and linkages. With this note we provide a full network study, although at a preliminary stage, that reports a complete analysis of a Romanian destination (Sibiu). Our intention is to increase the set of similar studies with the aim of supporting the investigations in structural and dynamical characteristics of tourism destinations.

  10. Intentional risk management through complex networks analysis

    CERN Document Server

    Chapela, Victor; Moral, Santiago; Romance, Miguel

    2015-01-01

    This book combines game theory and complex networks to examine intentional technological risk through modeling. As information security risks are in constant evolution,  the methodologies and tools to manage them must evolve to an ever-changing environment. A formal global methodology is explained  in this book, which is able to analyze risks in cyber security based on complex network models and ideas extracted from the Nash equilibrium. A risk management methodology for IT critical infrastructures is introduced which provides guidance and analysis on decision making models and real situations. This model manages the risk of succumbing to a digital attack and assesses an attack from the following three variables: income obtained, expense needed to carry out an attack, and the potential consequences for an attack. Graduate students and researchers interested in cyber security, complex network applications and intentional risk will find this book useful as it is filled with a number of models, methodologies a...

  11. Micro-macro analysis of complex networks.

    Science.gov (United States)

    Marchiori, Massimo; Possamai, Lino

    2015-01-01

    Complex systems have attracted considerable interest because of their wide range of applications, and are often studied via a "classic" approach: study a specific system, find a complex network behind it, and analyze the corresponding properties. This simple methodology has produced a great deal of interesting results, but relies on an often implicit underlying assumption: the level of detail on which the system is observed. However, in many situations, physical or abstract, the level of detail can be one out of many, and might also depend on intrinsic limitations in viewing the data with a different level of abstraction or precision. So, a fundamental question arises: do properties of a network depend on its level of observability, or are they invariant? If there is a dependence, then an apparently correct network modeling could in fact just be a bad approximation of the true behavior of a complex system. In order to answer this question, we propose a novel micro-macro analysis of complex systems that quantitatively describes how the structure of complex networks varies as a function of the detail level. To this extent, we have developed a new telescopic algorithm that abstracts from the local properties of a system and reconstructs the original structure according to a fuzziness level. This way we can study what happens when passing from a fine level of detail ("micro") to a different scale level ("macro"), and analyze the corresponding behavior in this transition, obtaining a deeper spectrum analysis. The obtained results show that many important properties are not universally invariant with respect to the level of detail, but instead strongly depend on the specific level on which a network is observed. Therefore, caution should be taken in every situation where a complex network is considered, if its context allows for different levels of observability.

  12. Analysis of cascading failure in gene networks

    Directory of Open Access Journals (Sweden)

    Shudong eWang

    2012-12-01

    Full Text Available It is an important subject to research the functional mechanism of cancer-related genes make in formation and development of cancers. The modern methodology of data analysis plays a very important role for deducing the relationship between cancers and cancer-related genes and analyzing functional mechanism of genome. In this research, we construct mutual information networks using gene expression profiles of glioblast and renal in normal condition and cancer conditions. We investigate the relationship between structure and robustness in gene networks of the two tissues using a cascading failure model based on betweenness centrality. Define some important parameters such as the percentage of failure nodes of the network, the average size-ratio of cascading failure and the cumulative probability of size-ratio of cascading failure to measure the robustness of the networks. By comparing control group and experiment groups, we find that the networks of experiment groups are more robust than that of control group. The gene that can cause large scale failure is called structural key gene (SKG. Some of them have been confirmed to be closely related to the formation and development of glioma and renal cancer respectively. Most of them are predicted to play important roles during the formation of glioma and renal cancer, maybe the oncogenes, suppressor genes, and other cancer candidate genes in the glioma and renal cancer cells. However, these studies provide little information about the detailed roles of identified cancer genes.

  13. Network topology and resilience analysis of South Korean power grid

    Science.gov (United States)

    Kim, Dong Hwan; Eisenberg, Daniel A.; Chun, Yeong Han; Park, Jeryang

    2017-01-01

    In this work, we present topological and resilience analyses of the South Korean power grid (KPG) with a broad voltage level. While topological analysis of KPG only with high-voltage infrastructure shows an exponential degree distribution, providing another empirical evidence of power grid topology, the inclusion of low voltage components generates a distribution with a larger variance and a smaller average degree. This result suggests that the topology of a power grid may converge to a highly skewed degree distribution if more low-voltage data is considered. Moreover, when compared to ER random and BA scale-free networks, the KPG has a lower efficiency and a higher clustering coefficient, implying that highly clustered structure does not necessarily guarantee a functional efficiency of a network. Error and attack tolerance analysis, evaluated with efficiency, indicate that the KPG is more vulnerable to random or degree-based attacks than betweenness-based intentional attack. Cascading failure analysis with recovery mechanism demonstrates that resilience of the network depends on both tolerance capacity and recovery initiation time. Also, when the two factors are fixed, the KPG is most vulnerable among the three networks. Based on our analysis, we propose that the topology of power grids should be designed so the loads are homogeneously distributed, or functional hubs and their neighbors have high tolerance capacity to enhance resilience.

  14. Static Voltage Stability Analysis by Using SVM and Neural Network

    Directory of Open Access Journals (Sweden)

    Mehdi Hajian

    2013-01-01

    Full Text Available Voltage stability is an important problem in power system networks. In this paper, in terms of static voltage stability, and application of Neural Networks (NN and Supported Vector Machine (SVM for estimating of voltage stability margin (VSM and predicting of voltage collapse has been investigated. This paper considers voltage stability in power system in two parts. The first part calculates static voltage stability margin by Radial Basis Function Neural Network (RBFNN. The advantage of the used method is high accuracy in online detecting the VSM. Whereas the second one, voltage collapse analysis of power system is performed by Probabilistic Neural Network (PNN and SVM. The obtained results in this paper indicate, that time and number of training samples of SVM, are less than NN. In this paper, a new model of training samples for detection system, using the normal distribution load curve at each load feeder, has been used. Voltage stability analysis is estimated by well-know L and VSM indexes. To demonstrate the validity of the proposed methods, IEEE 14 bus grid and the actual network of Yazd Province are used.

  15. Multiplex network analysis of employee performance and employee social relationships

    Science.gov (United States)

    Cai, Meng; Wang, Wei; Cui, Ying; Stanley, H. Eugene

    2018-01-01

    In human resource management, employee performance is strongly affected by both formal and informal employee networks. Most previous research on employee performance has focused on monolayer networks that can represent only single categories of employee social relationships. We study employee performance by taking into account the entire multiplex structure of underlying employee social networks. We collect three datasets consisting of five different employee relationship categories in three firms, and predict employee performance using degree centrality and eigenvector centrality in a superimposed multiplex network (SMN) and an unfolded multiplex network (UMN). We use a quadratic assignment procedure (QAP) analysis and a regression analysis to demonstrate that the different categories of relationship are mutually embedded and that the strength of their impact on employee performance differs. We also use weighted/unweighted SMN/UMN to measure the predictive accuracy of this approach and find that employees with high centrality in a weighted UMN are more likely to perform well. Our results shed new light on how social structures affect employee performance.

  16. Successful Completion of FY18/Q1 ASC L2 Milestone 6355: Electrical Analysis Calibration Workflow Capability Demonstration.

    Energy Technology Data Exchange (ETDEWEB)

    Copps, Kevin D. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2017-12-01

    The Sandia Analysis Workbench (SAW) project has developed and deployed a production capability for SIERRA computational mechanics analysis workflows. However, the electrical analysis workflow capability requirements have only been demonstrated in early prototype states, with no real capability deployed for analysts’ use. This milestone aims to improve the electrical analysis workflow capability (via SAW and related tools) and deploy it for ongoing use. We propose to focus on a QASPR electrical analysis calibration workflow use case. We will include a number of new capabilities (versus today’s SAW), such as: 1) support for the XYCE code workflow component, 2) data management coupled to electrical workflow, 3) human-in-theloop workflow capability, and 4) electrical analysis workflow capability deployed on the restricted (and possibly classified) network at Sandia. While far from the complete set of capabilities required for electrical analysis workflow over the long term, this is a substantial first step toward full production support for the electrical analysts.

  17. Combining network analysis with Cognitive Work Analysis: insights into social organisational and cooperation analysis.

    Science.gov (United States)

    Houghton, Robert J; Baber, Chris; Stanton, Neville A; Jenkins, Daniel P; Revell, Kirsten

    2015-01-01

    Cognitive Work Analysis (CWA) allows complex, sociotechnical systems to be explored in terms of their potential configurations. However, CWA does not explicitly analyse the manner in which person-to-person communication is performed in these configurations. Consequently, the combination of CWA with Social Network Analysis provides a means by which CWA output can be analysed to consider communication structure. The approach is illustrated through a case study of a military planning team. The case study shows how actor-to-actor and actor-to-function mapping can be analysed, in terms of centrality, to produce metrics of system structure under different operating conditions. In this paper, a technique for building social network diagrams from CWA is demonstrated.The approach allows analysts to appreciate the potential impact of organisational structure on a command system.

  18. Modeling and Experimental Demonstration of a Hopfield Network Analog-to-Digital Converter with Hybrid CMOS/Memristor Circuits.

    Science.gov (United States)

    Guo, Xinjie; Merrikh-Bayat, Farnood; Gao, Ligang; Hoskins, Brian D; Alibart, Fabien; Linares-Barranco, Bernabe; Theogarajan, Luke; Teuscher, Christof; Strukov, Dmitri B

    2015-01-01

    The purpose of this work was to demonstrate the feasibility of building recurrent artificial neural networks with hybrid complementary metal oxide semiconductor (CMOS)/memristor circuits. To do so, we modeled a Hopfield network implementing an analog-to-digital converter (ADC) with up to 8 bits of precision. Major shortcomings affecting the ADC's precision, such as the non-ideal behavior of CMOS circuitry and the specific limitations of memristors, were investigated and an effective solution was proposed, capitalizing on the in-field programmability of memristors. The theoretical work was validated experimentally by demonstrating the successful operation of a 4-bit ADC circuit implemented with discrete Pt/TiO2- x /Pt memristors and CMOS integrated circuit components.

  19. Social network analysis and network connectedness analysis for industrial symbiotic systems: model development and case study

    Science.gov (United States)

    Zhang, Yan; Zheng, Hongmei; Chen, Bin; Yang, Naijin

    2013-06-01

    An important and practical pattern of industrial symbiosis is rapidly developing: eco-industrial parks. In this study, we used social network analysis to study the network connectedness (i.e., the proportion of the theoretical number of connections that had been achieved) and related attributes of these hybrid ecological and industrial symbiotic systems. This approach provided insights into details of the network's interior and analyzed the overall degree of connectedness and the relationships among the nodes within the network. We then characterized the structural attributes of the network and subnetwork nodes at two levels (core and periphery), thereby providing insights into the operational problems within each eco-industrial park. We chose ten typical ecoindustrial parks in China and around the world and compared the degree of network connectedness of these systems that resulted from exchanges of products, byproducts, and wastes. By analyzing the density and nodal degree, we determined the relative power and status of the nodes in these networks, as well as other structural attributes such as the core-periphery structure and the degree of sub-network connectedness. The results reveal the operational problems created by the structure of the industrial networks and provide a basis for improving the degree of completeness, thereby increasing their potential for sustainable development and enriching the methods available for the study of industrial symbiosis.

  20. Demonstrating cerebral vascular networks: a comparison of methods for the teaching laboratory.

    Science.gov (United States)

    Ramos, Raddy L; Smith, Phoebe T; Croll, Susan D; Brumberg, Joshua C

    2008-01-01

    One challenge of neuroscience educators is to make accessible to students as many aspects of brain structure and function as possible. The anatomy and function of the cerebrovasculature is among many topics of neuroscience that are underrepresented in undergraduate neuroscience education. Recognizing this deficit, we evaluated methods to produce archival tissue specimens of the cerebrovasculature and the "neurovascular unit" for instruction and demonstration in the teaching lab. An additional goal of this project was to identify the costs of each method as well as to determine which method(s) could be adapted into lab exercises, where students participate in the tissue preparation, staining, etc. In the present report, we detail several methods for demonstrating the cerebrovasculature and suggest that including this material can be a valuable addition to more traditional anatomy/physiology demonstrations and exercises.

  1. Introduction to stream network habitat analysis

    Science.gov (United States)

    Bartholow, John M.; Waddle, Terry J.

    1986-01-01

    Increasing demands on stream resources by a variety of users have resulted in an increased emphasis on studies that evaluate the cumulative effects of basinwide water management programs. Network habitat analysis refers to the evaluation of an entire river basin (or network) by predicting its habitat response to alternative management regimes. The analysis principally focuses on the biological and hydrological components of the riv er basin, which include both micro- and macrohabitat. (The terms micro- and macrohabitat are further defined and discussed later in this document.) Both conceptual and analytic models are frequently used for simplifying and integrating the various components of the basin. The model predictions can be used in developing management recommendations to preserve, restore, or enhance instream fish habitat. A network habitat analysis should begin with a clear and concise statement of the study objectives and a thorough understanding of the institutional setting in which the study results will be applied. This includes the legal, social, and political considerations inherent in any water management setting. The institutional environment may dictate the focus and level of detail required of the study to a far greater extent than the technical considerations. After the study objectives, including species on interest, and institutional setting are collectively defined, the technical aspects should be scoped to determine the spatial and temporal requirements of the analysis. A macro level approach should be taken first to identify critical biological elements and requirements. Next, habitat availability is quantified much as in a "standard" river segment analysis, with the likely incorporation of some macrohabitat components, such as stream temperature. Individual river segments may be aggregated to represent the networkwide habitat response of alternative water management schemes. Things learned about problems caused or opportunities generated may

  2. Principal component analysis networks and algorithms

    CERN Document Server

    Kong, Xiangyu; Duan, Zhansheng

    2017-01-01

    This book not only provides a comprehensive introduction to neural-based PCA methods in control science, but also presents many novel PCA algorithms and their extensions and generalizations, e.g., dual purpose, coupled PCA, GED, neural based SVD algorithms, etc. It also discusses in detail various analysis methods for the convergence, stabilizing, self-stabilizing property of algorithms, and introduces the deterministic discrete-time systems method to analyze the convergence of PCA/MCA algorithms. Readers should be familiar with numerical analysis and the fundamentals of statistics, such as the basics of least squares and stochastic algorithms. Although it focuses on neural networks, the book only presents their learning law, which is simply an iterative algorithm. Therefore, no a priori knowledge of neural networks is required. This book will be of interest and serve as a reference source to researchers and students in applied mathematics, statistics, engineering, and other related fields.

  3. Service network analysis for agricultural mental health

    Directory of Open Access Journals (Sweden)

    Fuller Jeffrey D

    2009-05-01

    Full Text Available Abstract Background Farmers represent a subgroup of rural and remote communities at higher risk of suicide attributed to insecure economic futures, self-reliant cultures and poor access to health services. Early intervention models are required that tap into existing farming networks. This study describes service networks in rural shires that relate to the mental health needs of farming families. This serves as a baseline to inform service network improvements. Methods A network survey of mental health related links between agricultural support, health and other human services in four drought declared shires in comparable districts in rural New South Wales, Australia. Mental health links covered information exchange, referral recommendations and program development. Results 87 agencies from 111 (78% completed a survey. 79% indicated that two thirds of their clients needed assistance for mental health related problems. The highest mean number of interagency links concerned information exchange and the frequency of these links between sectors was monthly to three monthly. The effectiveness of agricultural support and health sector links were rated as less effective by the agricultural support sector than by the health sector (p Conclusion Aligning with agricultural agencies is important to build effective mental health service pathways to address the needs of farming populations. Work is required to ensure that these agricultural support agencies have operational and effective links to primary mental health care services. Network analysis provides a baseline to inform this work. With interventions such as local mental health training and joint service planning to promote network development we would expect to see over time an increase in the mean number of links, the frequency in which these links are used and the rated effectiveness of these links.

  4. Network Analysis and Modeling in Systems Biology

    OpenAIRE

    Bosque Chacón, Gabriel

    2017-01-01

    This thesis is dedicated to the study and comprehension of biological networks at the molecular level. The objectives were to analyse their topology, integrate it in a genotype-phenotype analysis, develop richer mathematical descriptions for them, study their community structure and compare different methodologies for estimating their internal fluxes. The work presented in this document moves around three main axes. The first one is the biological. Which organisms were studied in this ...

  5. A user’s guide to network analysis in R

    CERN Document Server

    Luke, Douglas

    2015-01-01

    Presenting a comprehensive resource for the mastery of network analysis in R, the goal of Network Analysis with R is to introduce modern network analysis techniques in R to social, physical, and health scientists. The mathematical foundations of network analysis are emphasized in an accessible way and readers are guided through the basic steps of network studies: network conceptualization, data collection and management, network description, visualization, and building and testing statistical models of networks. As with all of the books in the Use R! series, each chapter contains extensive R code and detailed visualizations of datasets. Appendices will describe the R network packages and the datasets used in the book. An R package developed specifically for the book, available to readers on GitHub, contains relevant code and real-world network datasets as well.

  6. Network value and optimum analysis on the mode of networked marketing in TV media

    Directory of Open Access Journals (Sweden)

    Xiao Dongpo

    2012-12-01

    Full Text Available Purpose: With the development of the networked marketing in TV media, it is important to do the research on network value and optimum analysis in this field.Design/methodology/approach: According to the research on the mode of networked marketing in TV media and Correlation theory, the essence of media marketing is creating, spreading and transferring values. The Participants of marketing value activities are in network, and value activities proceed in networked form. Network capability is important to TV media marketing activities.Findings: This article raises the direction of research of analysis and optimization about network based on the mode of networked marketing in TV media by studying TV media marketing Development Mechanism , network analysis and network value structure.

  7. The Application of Social Network Analysis to Team Sports

    Science.gov (United States)

    Lusher, Dean; Robins, Garry; Kremer, Peter

    2010-01-01

    This article reviews how current social network analysis might be used to investigate individual and group behavior in sporting teams. Social network analysis methods permit researchers to explore social relations between team members and their individual-level qualities simultaneously. As such, social network analysis can be seen as augmenting…

  8. Analysis and visualization of citation networks

    CERN Document Server

    Zhao, Dangzhi

    2015-01-01

    Citation analysis-the exploration of reference patterns in the scholarly and scientific literature-has long been applied in a number of social sciences to study research impact, knowledge flows, and knowledge networks. It has important information science applications as well, particularly in knowledge representation and in information retrieval.Recent years have seen a burgeoning interest in citation analysis to help address research, management, or information service issues such as university rankings, research evaluation, or knowledge domain visualization. This renewed and growing interest

  9. Compartmentalization analysis using discrete fracture network models

    Energy Technology Data Exchange (ETDEWEB)

    La Pointe, P.R.; Eiben, T.; Dershowitz, W. [Golder Associates, Redmond, VA (United States); Wadleigh, E. [Marathon Oil Co., Midland, TX (United States)

    1997-08-01

    This paper illustrates how Discrete Fracture Network (DFN) technology can serve as a basis for the calculation of reservoir engineering parameters for the development of fractured reservoirs. It describes the development of quantitative techniques for defining the geometry and volume of structurally controlled compartments. These techniques are based on a combination of stochastic geometry, computational geometry, and graph the theory. The parameters addressed are compartment size, matrix block size and tributary drainage volume. The concept of DFN models is explained and methodologies to compute these parameters are demonstrated.

  10. Demonstration of flexible and reconfigurable WDM multicast scheme supporting downstream emergency multicast communication for WDM optical access network

    Science.gov (United States)

    Li, Ze; Zhang, Min; Wang, Danshi; Cui, Yue

    2017-09-01

    We propose a flexible and reconfigurable wavelength-division multiplexing (WDM) multicast scheme supporting downstream emergency multicast communication for WDM optical access network (WDM-OAN) via a multicast module (MM) based on four-wave mixing (FWM) in a semiconductor optical amplifier. It serves as an emergency measure to dispose of the burst, large bandwidth, and real-time multicast service with fast service provisioning and high resource efficiency. It also plays the role of physical backup in cases of big data migration or network disaster caused by invalid lasers or modulator failures. It provides convenient and reliable multicast service and emergency protection for WDM-OAN without modifying WDM-OAN structure. The strategies of an MM setting at the optical line terminal and remote node are discussed to apply this scheme to passive optical networks and active optical networks, respectively. Utilizing the proposed scheme, we demonstrate a proof-of-concept experiment in which one-to-six/eight 10-Gbps nonreturn-to-zero-differential phase-shift keying WDM multicasts in both strategies are successfully transmitted over single-mode fiber of 20.2 km. One-to-many reconfigurable WDM multicasts dealing with higher data rate and other modulation formats of multicast service are possible through the proposed scheme. It can be applied to different WDM access technologies, e.g., time-wavelength-division multiplexing-OAN and coherent WDM-OAN, and upgraded smoothly.

  11. Network analysis of time-lapse microscopy recordings.

    Science.gov (United States)

    Smedler, Erik; Malmersjö, Seth; Uhlén, Per

    2014-01-01

    Multicellular organisms rely on intercellular communication to regulate important cellular processes critical to life. To further our understanding of those processes there is a need to scrutinize dynamical signaling events and their functions in both cells and organisms. Here, we report a method and provide MATLAB code that analyzes time-lapse microscopy recordings to identify and characterize network structures within large cell populations, such as interconnected neurons. The approach is demonstrated using intracellular calcium (Ca(2+)) recordings in neural progenitors and cardiac myocytes, but could be applied to a wide variety of biosensors employed in diverse cell types and organisms. In this method, network structures are analyzed by applying cross-correlation signal processing and graph theory to single-cell recordings. The goal of the analysis is to determine if the single cell activity constitutes a network of interconnected cells and to decipher the properties of this network. The method can be applied in many fields of biology in which biosensors are used to monitor signaling events in living cells. Analyzing intercellular communication in cell ensembles can reveal essential network structures that provide important biological insights.

  12. Network Analysis of Time-Lapse Microscopy Recordings

    Directory of Open Access Journals (Sweden)

    Erik eSmedler

    2014-09-01

    Full Text Available Multicellular organisms rely on intercellular communication to regulate important cellular processes critical to life. To further our understanding of those processes there is a need to scrutinize dynamical signaling events and their functions in both cells and organisms. Here, we report a method and provide MATLAB code that analyzes time-lapse microscopy recordings to identify and characterize network structures within large cell populations, such as interconnected neurons. The approach is demonstrated using intracellular calcium (Ca2+ recordings in neural progenitors and cardiac myocytes, but could be applied to a wide variety of biosensors employed in diverse cell types and organisms. In this method, network structures are analyzed by applying cross-correlation signal processing and graph theory to single-cell recordings. The goal of the analysis is to determine if the single cell activity constitutes a network of interconnected cells and to decipher the properties of this network. The method can be applied in many fields of biology in which biosensors are used to monitor signaling events in living cells. Analyzing intercellular communication in cell ensembles can reveal essential network structures that provide important biological insights.

  13. The graph theoretical analysis of the SSVEP harmonic response networks.

    Science.gov (United States)

    Zhang, Yangsong; Guo, Daqing; Cheng, Kaiwen; Yao, Dezhong; Xu, Peng

    2015-06-01

    Steady-state visually evoked potentials (SSVEP) have been widely used in the neural engineering and cognitive neuroscience researches. Previous studies have indicated that the SSVEP fundamental frequency responses are correlated with the topological properties of the functional networks entrained by the periodic stimuli. Given the different spatial and functional roles of the fundamental frequency and harmonic responses, in this study we further investigated the relation between the harmonic responses and the corresponding functional networks, using the graph theoretical analysis. We found that the second harmonic responses were positively correlated to the mean functional connectivity, clustering coefficient, and global and local efficiencies, while negatively correlated with the characteristic path lengths of the corresponding networks. In addition, similar pattern occurred with the lowest stimulus frequency (6.25 Hz) at the third harmonic responses. These findings demonstrate that more efficient brain networks are related to larger SSVEP responses. Furthermore, we showed that the main connection pattern of the SSVEP harmonic response networks originates from the interactions between the frontal and parietal-occipital regions. Overall, this study may bring new insights into the understanding of the brain mechanisms underlying SSVEP.

  14. Hearing health network: a spatial analysis

    Directory of Open Access Journals (Sweden)

    Camila Ferreira de Rezende

    2015-06-01

    Full Text Available INTRODUCTION: In order to meet the demands of the patient population with hearing impairment, the Hearing Health Care Network was created, consisting of primary care actions of medium and high complexity. Spatial analysis through geoprocessing is a way to understand the organization of such services. OBJECTIVE: To analyze the organization of the Hearing Health Care Network of the State of Minas Gerais. METHODS: Cross-sectional analytical study using geoprocessing techniques. The absolute frequency and the frequency per 1000 inhabitants of the following variables were analyzed: assessment and diagnosis, selection and adaptation of hearing aids, follow-up, and speech therapy. The spatial analysis unit was the health micro-region. RESULTS: The assessment and diagnosis, selection, and adaptation of hearing aids and follow-up had a higher absolute number in the micro-regions with hearing health services. The follow-up procedure showed the lowest occurrence. Speech therapy showed higher occurrence in the state, both in absolute numbers, as well as per population. CONCLUSION: The use of geoprocessing techniques allowed the identification of the care flow as a function of the procedure performance frequency, population concentration, and territory distribution. All procedures offered by the Hearing Health Care Network are performed for users of all micro-regions of the state.

  15. Design Criteria For Networked Image Analysis System

    Science.gov (United States)

    Reader, Cliff; Nitteberg, Alan

    1982-01-01

    Image systems design is currently undergoing a metamorphosis from the conventional computing systems of the past into a new generation of special purpose designs. This change is motivated by several factors, notably among which is the increased opportunity for high performance with low cost offered by advances in semiconductor technology. Another key issue is a maturing in understanding of problems and the applicability of digital processing techniques. These factors allow the design of cost-effective systems that are functionally dedicated to specific applications and used in a utilitarian fashion. Following an overview of the above stated issues, the paper presents a top-down approach to the design of networked image analysis systems. The requirements for such a system are presented, with orientation toward the hospital environment. The three main areas are image data base management, viewing of image data and image data processing. This is followed by a survey of the current state of the art, covering image display systems, data base techniques, communications networks and software systems control. The paper concludes with a description of the functional subystems and architectural framework for networked image analysis in a production environment.

  16. Capacity analysis of wireless mesh networks | Gumel | Nigerian ...

    African Journals Online (AJOL)

    The next generation wireless· netWorks experienced agreat development with emergence of wireless mesh networks (WMNs), which can be regarded as a realistic solution that provides wireless broadband access. The limited available bandwidth makes capacity analysis of the network very essential. While the network ...

  17. Practical demonstration of spectrally efficient FDM millimeter-wave radio over fiber systems for 5G cellular networking

    Science.gov (United States)

    Mikroulis, Spiros; Xu, Tongyang; Darwazeh, Izzat

    2016-02-01

    This work reports the first demonstration of spectrally efficient frequency division multiplexed (SEFDM) signal transmission based on mm-wave radio over fiber (RoF) technology. Such systems aim to satisfy the beyond 4G (5G) demands of low cost, low energy, millimeter-wave carrier frequencies and high spectral efficiency. The proposed radio over fiber topology, using passive optical network (PON) infrastructure and low-cost multimode fiber (MMF), is analyzed and a proof-of-concept SEFDM radio over 250m OM-1 MMF transmission with a 3m 60GHz wireless link is successfully demonstrated. Different systems are demonstrated, at raw data rates up to 3.7 Gb/s, showing SEFDM spectrum saving up to 40% relative to OFDM.

  18. Activity Recognition Using Complex Network Analysis.

    Science.gov (United States)

    Jalloul, Nahed; Poree, Fabienne; Viardot, Geoffrey; L'Hostis, Phillipe; Carrault, Guy

    2017-10-12

    In this paper, we perform complex network analysis on a connectivity dataset retrieved from a monitoring system in order to classify simple daily activities. The monitoring system is composed of a set of wearable sensing modules positioned on the subject's body and the connectivity data consists of the correlation between each pair of modules. A number of network measures are then computed followed by the application of statistical significance and feature selection methods. These methods were implemented for the purpose of reducing the total number of modules in the monitoring system required to provide accurate activity classification. The obtained results show that an overall accuracy of 84.6% for activity classification is achieved, using a Random Forest (RF) classifier, and when considering a monitoring system composed of only two modules positioned at the Neck and Thigh of the subject's body.

  19. Integrated Adaptive Analysis and Visualization of Satellite Network Data Project

    Data.gov (United States)

    National Aeronautics and Space Administration — We propose to develop a system that enables integrated and adaptive analysis and visualization of satellite network management data. Integrated analysis and...

  20. Using structural equation modeling for network meta-analysis.

    Science.gov (United States)

    Tu, Yu-Kang; Wu, Yun-Chun

    2017-07-14

    Network meta-analysis overcomes the limitations of traditional pair-wise meta-analysis by incorporating all available evidence into a general statistical framework for simultaneous comparisons of several treatments. Currently, network meta-analyses are undertaken either within the Bayesian hierarchical linear models or frequentist generalized linear mixed models. Structural equation modeling (SEM) is a statistical method originally developed for modeling causal relations among observed and latent variables. As random effect is explicitly modeled as a latent variable in SEM, it is very flexible for analysts to specify complex random effect structure and to make linear and nonlinear constraints on parameters. The aim of this article is to show how to undertake a network meta-analysis within the statistical framework of SEM. We used an example dataset to demonstrate the standard fixed and random effect network meta-analysis models can be easily implemented in SEM. It contains results of 26 studies that directly compared three treatment groups A, B and C for prevention of first bleeding in patients with liver cirrhosis. We also showed that a new approach to network meta-analysis based on the technique of unrestricted weighted least squares (UWLS) method can also be undertaken using SEM. For both the fixed and random effect network meta-analysis, SEM yielded similar coefficients and confidence intervals to those reported in the previous literature. The point estimates of two UWLS models were identical to those in the fixed effect model but the confidence intervals were greater. This is consistent with results from the traditional pairwise meta-analyses. Comparing to UWLS model with common variance adjusted factor, UWLS model with unique variance adjusted factor has greater confidence intervals when the heterogeneity was larger in the pairwise comparison. The UWLS model with unique variance adjusted factor reflects the difference in heterogeneity within each comparison

  1. Understanding resilience in industrial symbiosis networks: insights from network analysis.

    Science.gov (United States)

    Chopra, Shauhrat S; Khanna, Vikas

    2014-08-01

    Industrial symbiotic networks are based on the principles of ecological systems where waste equals food, to develop synergistic networks. For example, industrial symbiosis (IS) at Kalundborg, Denmark, creates an exchange network of waste, water, and energy among companies based on contractual dependency. Since most of the industrial symbiotic networks are based on ad-hoc opportunities rather than strategic planning, gaining insight into disruptive scenarios is pivotal for understanding the balance of resilience and sustainability and developing heuristics for designing resilient IS networks. The present work focuses on understanding resilience as an emergent property of an IS network via a network-based approach with application to the Kalundborg Industrial Symbiosis (KIS). Results from network metrics and simulated disruptive scenarios reveal Asnaes power plant as the most critical node in the system. We also observe a decrease in the vulnerability of nodes and reduction in single points of failure in the system, suggesting an increase in the overall resilience of the KIS system from 1960 to 2010. Based on our findings, we recommend design strategies, such as increasing diversity, redundancy, and multi-functionality to ensure flexibility and plasticity, to develop resilient and sustainable industrial symbiotic networks. Copyright © 2014 Elsevier Ltd. All rights reserved.

  2. The smart grid research network: Road map for Smart Grid research, development and demonstration up to 2020

    Energy Technology Data Exchange (ETDEWEB)

    Troi, A. [Technical Univ. of Denmark. DTU Electrical Engineering, DTU Risoe Campus, Roskilde (Denmark); Noerregaard Joergensen, B. [Syddansk Univ. (SDU), Odense (Denmark); Mahler Larsen, E. [Technical Univ. of Denmark. DTU Electrical Engineering, Kgs. Lyngby (Denmark)] [and others

    2013-01-15

    This road map is a result of part-recommendation no. 25 in 'MAIN REPORT - The Smart Grid Network's recommendations', written by the Smart Grid Network for the Danish Ministry of Climate, Energy and Building in October 2011. This part-recommendation states: ''Part-recommendation 25 - A road map for Smart Grid research, development and demonstration It is recommended that the electricity sector invite the Ministry to participate in the creation of a road map to ensure that solutions are implemented and coordinated with related policy areas. The sector should also establish a fast-acting working group with representatives from universities, distribution companies and the electric industry, in order to produce a mutual, binding schedule for the RDD of the Smart Grid in Denmark. Time prioritisation of part-recommendation: 2011-2012 Responsibility for implementation of part-recommendation: Universities, along with relevant electric-industry actors, should establish a working group for the completion of a consolidated road map by the end of 2012.'' In its work on this report, the Smart Grid Research Network has focused particularly on part-recommendations 26, 27 and 28 in 'MAIN REPORT - The Smart Grid Network's recommendations', which relate to strengthening and marketing the research infrastructure that will position Denmark as the global hub for Smart Grid development; strengthening basic research into the complex relationships in electric systems with large quantities of independent parties; and improved understanding of consumer behaviour and social economics. Naturally the work has spread to related areas along the way. The work has been conducted by the Smart Grid Research Network. (Author)

  3. Synchronization analysis of coloured delayed networks under ...

    Indian Academy of Sciences (India)

    Up to now, many network models on synchronization have been put forward, such as, the small-world network, directed network, neural network etc. Previous efforts were mainly to study the outer relationship between the nodes. But, the inner interaction is always overlooked. Afterwards, the coloured network model has ...

  4. Proof-of-Concept Demonstrations of a Flight Adjustment Logging and Communication Network

    Science.gov (United States)

    Underwood, Matthew C.; Merlino, Daniel K.; Carboneau, Lindsey M.; Wilson, C. Logan; Wilder, Andrew J.

    2016-01-01

    The National Airspace System is a highly complex system of systems within which a number of participants with widely varying business and operating models exist. From the airspace user's perspective, a means by which to operate flights in a more flexible and efficient manner is highly desired to meet their business objectives. From the air navigation service provider's viewpoint, there is a need for increasing the capacity of the airspace, while maintaining or increasing the levels of efficiency and safety that currently exist in order to meet the charter under which they operate. Enhancing the communication between airspace operators and users is essential in order to meet these demands. In the spring of 2015, a prototype system that implemented an airborne tool to optimize en-route flight paths for fuel and time savings was designed and tested. The system utilized in-flight Internet as a high-bandwidth data link to facilitate collaborative decision making between the flight deck and an airline dispatcher. The system was tested and demonstrated in a laboratory environment, as well as in-situ. Initial results from these tests indicate that this system is not only feasible, but could also serve as a growth path and testbed for future air traffic management concepts that rely on shared situational awareness through data exchange and electronic negotiation between multiple entities operating within the National Airspace System.

  5. Network meta-analysis: an introduction for clinicians.

    Science.gov (United States)

    Rouse, Benjamin; Chaimani, Anna; Li, Tianjing

    2017-02-01

    Network meta-analysis is a technique for comparing multiple treatments simultaneously in a single analysis by combining direct and indirect evidence within a network of randomized controlled trials. Network meta-analysis may assist assessing the comparative effectiveness of different treatments regularly used in clinical practice and, therefore, has become attractive among clinicians. However, if proper caution is not taken in conducting and interpreting network meta-analysis, inferences might be biased. The aim of this paper is to illustrate the process of network meta-analysis with the aid of a working example on first-line medical treatment for primary open-angle glaucoma. We discuss the key assumption of network meta-analysis, as well as the unique considerations for developing appropriate research questions, conducting the literature search, abstracting data, performing qualitative and quantitative synthesis, presenting results, drawing conclusions, and reporting the findings in a network meta-analysis.

  6. A SAT-Based Analysis of a Calculus for Wireless Sensor Networks

    DEFF Research Database (Denmark)

    Wu, Xi; Nielson, Hanne Riis; Zhu, Huibiao

    2015-01-01

    In viewing the common unreliability problem in wireless communications, the CWQ calculus (a Calculus for Wireless sensor networks from Quality perspective) was recently proposed for modeling and reasoning about WSNs(Wireless Sensor Networks) and their applications from a quality perspective...... of the whole network. Finally, we give a real-world case study with the scenario of refueling a car to demonstrate the applicability of the extended calculus and the SAT-based analysis....

  7. Demonstration of efficient on-chip photon transfer in self-assembled optoplasmonic networks.

    Science.gov (United States)

    Ahn, Wonmi; Hong, Yan; Boriskina, Svetlana V; Reinhard, Björn M

    2013-05-28

    Plasmonic nanoantennas facilitate the manipulation of light fields on deeply sub-diffraction-limited length scales, but high dissipative losses in metals make new approaches for an efficient energy transfer in extended on-chip integrated plasmonic circuits mandatory. We demonstrate in this article efficient photon transfer in discrete optoplasmonic molecules comprising gold nanoparticle (NP) dimer antennas located in the evanescent field of a 2 μm diameter polystyrene bead, which served as an optical microcavity (OM). The optoplasmonic molecules were generated through a guided self-assembly strategy in which the OMs were immobilized in binding sites generated by quartz (SiO2) or silicon posts that contained plasmonic nanoantennas on their tips. Control of the post height facilitated an accurate positioning of the plasmonic antennas into the evanescent field of the whispering gallery modes located in the equatorial plane of the OM. Cy3 and Cy5.5 dyes were tethered to the plasmonic antennas through oligonucleotide spacers to act as on-chip light sources. The intensity of Cy3 was found to be increased relative to that of Cy5.5 in the vicinity of the plasmonic antennas where strongly enhanced electric field intensity and optical density of states selectively increase the excitation and emission rates of Cy3 due to spectral overlap with the plasmon. The fluorescent dyes preferentially emitted into the OM, which efficiently trapped and recirculated the photons. We experimentally determined a relative photon transfer efficiency of 44% in non-optimized self-assembled optoplasmonic molecules in this proof-of-principle study.

  8. Syphilis Networks in Louisiana: An Analysis of Network Configuration and Disease Transmission

    Science.gov (United States)

    Desmarais, Catherine Theresa

    Background: In 2009, Louisiana had the highest rate of primary and secondary syphilis in the country. Recent partner notification approaches have been insufficient in addressing Louisiana's deeply entrenched areas of syphilis infection. Prior researchers have suggested that surveillance systems may benefit from utilizing social and spatial network analysis in syphilis control efforts. Objective: To expand the understanding of the spread of syphilis in Louisiana, and to add new tools to the state's case finding resources through the description of the characteristics of cases of early syphilis and their partners in Louisiana, the socio-sexual networks of these cases, and the geospatial clustering of cases and partners. Methods: Utilizing state surveillance data, all cases of primary, secondary, and early latent syphilis that were diagnosed in 2009 and data on their sexual or needle sharing partners were analyzed using a combination of descriptive, network, and geospatial measures. Results: In 2009, Louisiana experienced a high rate of heterosexual syphilis transmission. Within syphilis transmission networks, 50.8% of all cases were female and 84.2% of all cases were black. The average and median ages of males with reactive syphilis tests were higher than that of females in Louisiana, and in 88.9% of regions, older individuals were more likely to have a syphilis test than no test. A greater proportion of males (11.4%) refused to discuss partners than females (7.4%) and a greater proportion of males (5.5%) refused testing and prophylactic treatment than females (2.8%). No distinct patterns were seen in disease prevalence between regions based upon demographic data. Classic summary network measures such as density, degree, centrality, and betweenness provided little information on similarities and differences between the different regions in Louisiana. All measures indicated low density and extreme fragmentation of networks in Louisiana. The majority of network

  9. Stochastic analysis of complex reaction networks using binomial moment equations

    Science.gov (United States)

    Barzel, Baruch; Biham, Ofer

    2012-09-01

    The stochastic analysis of complex reaction networks is a difficult problem because the number of microscopic states in such systems increases exponentially with the number of reactive species. Direct integration of the master equation is thus infeasible and is most often replaced by Monte Carlo simulations. While Monte Carlo simulations are a highly effective tool, equation-based formulations are more amenable to analytical treatment and may provide deeper insight into the dynamics of the network. Here, we present a highly efficient equation-based method for the analysis of stochastic reaction networks. The method is based on the recently introduced binomial moment equations [Barzel and Biham, Phys. Rev. Lett.PRLTAO0031-900710.1103/PhysRevLett.106.150602 106, 150602 (2011)]. The binomial moments are linear combinations of the ordinary moments of the probability distribution function of the population sizes of the interacting species. They capture the essential combinatorics of the reaction processes reflecting their stoichiometric structure. This leads to a simple and transparent form of the equations, and allows a highly efficient and surprisingly simple truncation scheme. Unlike ordinary moment equations, in which the inclusion of high order moments is prohibitively complicated, the binomial moment equations can be easily constructed up to any desired order. The result is a set of equations that enables the stochastic analysis of complex reaction networks under a broad range of conditions. The number of equations is dramatically reduced from the exponential proliferation of the master equation to a polynomial (and often quadratic) dependence on the number of reactive species in the binomial moment equations. The aim of this paper is twofold: to present a complete derivation of the binomial moment equations; to demonstrate the applicability of the moment equations for a representative set of example networks, in which stochastic effects play an important role.

  10. Stochastic analysis of complex reaction networks using binomial moment equations.

    Science.gov (United States)

    Barzel, Baruch; Biham, Ofer

    2012-09-01

    The stochastic analysis of complex reaction networks is a difficult problem because the number of microscopic states in such systems increases exponentially with the number of reactive species. Direct integration of the master equation is thus infeasible and is most often replaced by Monte Carlo simulations. While Monte Carlo simulations are a highly effective tool, equation-based formulations are more amenable to analytical treatment and may provide deeper insight into the dynamics of the network. Here, we present a highly efficient equation-based method for the analysis of stochastic reaction networks. The method is based on the recently introduced binomial moment equations [Barzel and Biham, Phys. Rev. Lett. 106, 150602 (2011)]. The binomial moments are linear combinations of the ordinary moments of the probability distribution function of the population sizes of the interacting species. They capture the essential combinatorics of the reaction processes reflecting their stoichiometric structure. This leads to a simple and transparent form of the equations, and allows a highly efficient and surprisingly simple truncation scheme. Unlike ordinary moment equations, in which the inclusion of high order moments is prohibitively complicated, the binomial moment equations can be easily constructed up to any desired order. The result is a set of equations that enables the stochastic analysis of complex reaction networks under a broad range of conditions. The number of equations is dramatically reduced from the exponential proliferation of the master equation to a polynomial (and often quadratic) dependence on the number of reactive species in the binomial moment equations. The aim of this paper is twofold: to present a complete derivation of the binomial moment equations; to demonstrate the applicability of the moment equations for a representative set of example networks, in which stochastic effects play an important role.

  11. Network-based analysis of proteomic profiles

    KAUST Repository

    Wong, Limsoon

    2016-01-26

    Mass spectrometry (MS)-based proteomics is a widely used and powerful tool for profiling systems-wide protein expression changes. It can be applied for various purposes, e.g. biomarker discovery in diseases and study of drug responses. Although RNA-based high-throughput methods have been useful in providing glimpses into the underlying molecular processes, the evidences they provide are indirect. Furthermore, RNA and corresponding protein levels have been known to have poor correlation. On the other hand, MS-based proteomics tend to have consistency issues (poor reproducibility and inter-sample agreement) and coverage issues (inability to detect the entire proteome) that need to be urgently addressed. In this talk, I will discuss how these issues can be addressed by proteomic profile analysis techniques that use biological networks (especially protein complexes) as the biological context. In particular, I will describe several techniques that we have been developing for network-based analysis of proteomics profile. And I will present evidence that these techniques are useful in identifying proteomics-profile analysis results that are more consistent, more reproducible, and more biologically coherent, and that these techniques allow expansion of the detected proteome to uncover and/or discover novel proteins.

  12. Social sciences via network analysis and computation

    CERN Document Server

    Kanduc, Tadej

    2015-01-01

    In recent years information and communication technologies have gained significant importance in the social sciences. Because there is such rapid growth of knowledge, methods and computer infrastructure, research can now seamlessly connect interdisciplinary fields such as business process management, data processing and mathematics. This study presents some of the latest results, practices and state-of-the-art approaches in network analysis, machine learning, data mining, data clustering and classifications in the contents of social sciences. It also covers various real-life examples such as t

  13. Dependency Network Analysis (DEPNA) Reveals Context Related Influence of Brain Network Nodes.

    Science.gov (United States)

    Jacob, Yael; Winetraub, Yonatan; Raz, Gal; Ben-Simon, Eti; Okon-Singer, Hadas; Rosenberg-Katz, Keren; Hendler, Talma; Ben-Jacob, Eshel

    2016-06-07

    Communication between and within brain regions is essential for information processing within functional networks. The current methods to determine the influence of one region on another are either based on temporal resolution, or require a predefined model for the connectivity direction. However these requirements are not always achieved, especially in fMRI studies, which have poor temporal resolution. We thus propose a new graph theory approach that focuses on the correlation influence between selected brain regions, entitled Dependency Network Analysis (DEPNA). Partial correlations are used to quantify the level of influence of each node during task performance. As a proof of concept, we conducted the DEPNA on simulated datasets and on two empirical motor and working memory fMRI tasks. The simulations revealed that the DEPNA correctly captures the network's hierarchy of influence. Applying DEPNA to the functional tasks reveals the dynamics between specific nodes as would be expected from prior knowledge. To conclude, we demonstrate that DEPNA can capture the most influencing nodes in the network, as they emerge during specific cognitive processes. This ability opens a new horizon for example in delineating critical nodes for specific clinical interventions.

  14. Models as Tools of Analysis of a Network Organisation

    Directory of Open Access Journals (Sweden)

    Wojciech Pająk

    2013-06-01

    Full Text Available The paper presents models which may be applied as tools of analysis of a network organisation. The starting point of the discussion is defining the following terms: supply chain and network organisation. Further parts of the paper present basic assumptions analysis of a network organisation. Then the study characterises the best known models utilised in analysis of a network organisation. The purpose of the article is to define the notion and the essence of network organizations and to present the models used for their analysis.

  15. Analysis of regulatory networks constructed based on gene ...

    Indian Academy of Sciences (India)

    Gene coexpression patterns can reveal gene collections with functional consistency. This study systematically constructs regulatory networks for pituitary tumours by integrating gene coexpression, transcriptional and posttranscriptional regulation. Through network analysis, we elaborate the incidence mechanism of pituitary ...

  16. Analysis of regulatory networks constructed based on gene ...

    Indian Academy of Sciences (India)

    2013-12-09

    Dec 9, 2013 ... Abstract. Gene coexpression patterns can reveal gene collections with functional consistency. This study systematically constructs regulatory networks for pituitary tumours by integrating gene coexpression, transcriptional and posttranscriptional regulation. Through network analysis, we elaborate the ...

  17. Digital image analysis to quantify carbide networks in ultrahigh carbon steels

    Energy Technology Data Exchange (ETDEWEB)

    Hecht, Matthew D.; Webler, Bryan A.; Picard, Yoosuf N., E-mail: ypicard@cmu.edu

    2016-07-15

    A method has been developed and demonstrated to quantify the degree of carbide network connectivity in ultrahigh carbon steels through digital image processing and analysis of experimental micrographs. It was shown that the network connectivity and carbon content can be correlated to toughness for various ultrahigh carbon steel specimens. The image analysis approach first involved segmenting the carbide network and pearlite matrix into binary contrast representations via a grayscale intensity thresholding operation. Next, the carbide network pixels were skeletonized and parceled into braches and nodes, allowing the determination of a connectivity index for the carbide network. Intermediate image processing steps to remove noise and fill voids in the network are also detailed. The connectivity indexes of scanning electron micrographs were consistent in both secondary and backscattered electron imaging modes, as well as across two different (50 × and 100 ×) magnifications. Results from ultrahigh carbon steels reported here along with other results from the literature generally showed lower connectivity indexes correlated with higher Charpy impact energy (toughness). A deviation from this trend was observed at higher connectivity indexes, consistent with a percolation threshold for crack propagation across the carbide network. - Highlights: • A method for carbide network analysis in steels is proposed and demonstrated. • ImageJ method extracts a network connectivity index from micrographs. • Connectivity index consistent in different imaging conditions and magnifications. • Impact energy may plateau when a critical network connectivity is exceeded.

  18. Robustness Analysis of Real Network Topologies Under Multiple Failure Scenarios

    DEFF Research Database (Denmark)

    Manzano, M.; Marzo, J. L.; Calle, E.

    2012-01-01

    on topological characteristics. Recently approaches also consider the services supported by such networks. In this paper we carry out a robustness analysis of five real backbone telecommunication networks under defined multiple failure scenarios, taking into account the consequences of the loss of established......Nowadays the ubiquity of telecommunication networks, which underpin and fulfill key aspects of modern day living, is taken for granted. Significant large-scale failures have occurred in the last years affecting telecommunication networks. Traditionally, network robustness analysis has been focused...... connections. Results show which networks are more robust in response to a specific type of failure....

  19. Analysis and Reduction of Complex Networks Under Uncertainty

    Energy Technology Data Exchange (ETDEWEB)

    Knio, Omar M

    2014-04-09

    This is a collaborative proposal that aims at developing new methods for the analysis and reduction of complex multiscale networks under uncertainty. The approach is based on combining methods of computational singular perturbation (CSP) and probabilistic uncertainty quantification. In deterministic settings, CSP yields asymptotic approximations of reduced-dimensionality “slow manifolds” on which a multiscale dynamical system evolves. Introducing uncertainty raises fundamentally new issues, particularly concerning its impact on the topology of slow manifolds, and means to represent and quantify associated variability. To address these challenges, this project uses polynomial chaos (PC) methods to reformulate uncertain network models, and to analyze them using CSP in probabilistic terms. Specific objectives include (1) developing effective algorithms that can be used to illuminate fundamental and unexplored connections among model reduction, multiscale behavior, and uncertainty, and (2) demonstrating the performance of these algorithms through applications to model problems.

  20. Early stage design and analysis of biorefinery networks

    DEFF Research Database (Denmark)

    Sin, Gürkan

    2013-01-01

    of the process configuration which exhibits the best performances, for a given set of economical, technical and environmental criteria. To this end, we formulate a computer-aided framework as an enabling technology for early stage design and analysis of biorefineries. The tool represents different raw materials......, different products and different available technologies and proposes a conceptual (early stage) biorefinery network. This network can then be the basis for further detailed and rigorous model-based studies. In this talk, we demonstrate the application of the tool for generating an early stage optimal......Recent work regarding biorefineries resulted in many competing concepts and technologies for conversion of renewable bio-based feedstock into many promising products including fuels, chemicals, materials, etc. The design of a biorefinery process requires, at its earlier stages, the selection...

  1. Identifying changes in the support networks of end-of-life carers using social network analysis.

    Science.gov (United States)

    Leonard, Rosemary; Horsfall, Debbie; Noonan, Kerrie

    2015-06-01

    End-of-life caring is often associated with reduced social networks for both the dying person and for the carer. However, those adopting a community participation and development approach, see the potential for the expansion and strengthening of networks. This paper uses Knox, Savage and Harvey's definitions of three generations social network analysis to analyse the caring networks of people with a terminal illness who are being cared for at home and identifies changes in these caring networks that occurred over the period of caring. Participatory network mapping of initial and current networks was used in nine focus groups. The analysis used key concepts from social network analysis (size, density, transitivity, betweenness and local clustering) together with qualitative analyses of the group's reflections on the maps. The results showed an increase in the size of the networks and that ties between the original members of the network strengthened. The qualitative data revealed the importance between core and peripheral network members and the diverse contributions of the network members. The research supports the value of third generation social network analysis and the potential for end-of-life caring to build social capital. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions.

  2. Analysis and Comparison of Typical Models within Distribution Network Design

    DEFF Research Database (Denmark)

    Jørgensen, Hans Jacob; Larsen, Allan; Madsen, Oli B.G.

    Efficient and cost effective transportation and logistics plays a vital role in the supply chains of the modern world’s manufacturers. Global distribution of goods is a very complicated matter as it involves many different distinct planning problems. The focus of this presentation is to demonstrate...... a number of important issues which have been identified when addressing the Distribution Network Design problem from a modelling angle. More specifically, we present an analysis of the research which has been performed in utilizing operational research in developing and optimising distribution systems....

  3. Advantages of Social Network Analysis in Educational Research

    Science.gov (United States)

    Ushakov, K. M.; Kukso, K. N.

    2015-01-01

    Currently one of the main tools for the large scale studies of schools is statistical analysis. Although it is the most common method and it offers greatest opportunities for analysis, there are other quantitative methods for studying schools, such as network analysis. We discuss the potential advantages that network analysis has for educational…

  4. Applying DNA computation to intractable problems in social network analysis.

    Science.gov (United States)

    Chen, Rick C S; Yang, Stephen J H

    2010-09-01

    From ancient times to the present day, social networks have played an important role in the formation of various organizations for a range of social behaviors. As such, social networks inherently describe the complicated relationships between elements around the world. Based on mathematical graph theory, social network analysis (SNA) has been developed in and applied to various fields such as Web 2.0 for Web applications and product developments in industries, etc. However, some definitions of SNA, such as finding a clique, N-clique, N-clan, N-club and K-plex, are NP-complete problems, which are not easily solved via traditional computer architecture. These challenges have restricted the uses of SNA. This paper provides DNA-computing-based approaches with inherently high information density and massive parallelism. Using these approaches, we aim to solve the three primary problems of social networks: N-clique, N-clan, and N-club. Their accuracy and feasible time complexities discussed in the paper will demonstrate that DNA computing can be used to facilitate the development of SNA. Copyright 2010 Elsevier Ireland Ltd. All rights reserved.

  5. Neural network analysis for hazardous waste characterization

    Energy Technology Data Exchange (ETDEWEB)

    Misra, M.; Pratt, L.Y.; Farris, C. [Colorado School of Mines, Golden, CO (United States)] [and others

    1995-12-31

    This paper is a summary of our work in developing a system for interpreting electromagnetic (EM) and magnetic sensor information from the dig face characterization experimental cell at INEL to determine the depth and nature of buried objects. This project contained three primary components: (1) development and evaluation of several geophysical interpolation schemes for correcting missing or noisy data, (2) development and evaluation of several wavelet compression schemes for removing redundancies from the data, and (3) construction of two neural networks that used the results of steps (1) and (2) to determine the depth and nature of buried objects. This work is a proof-of-concept study that demonstrates the feasibility of this approach. The resulting system was able to determine the nature of buried objects correctly 87% of the time and was able to locate a buried object to within an average error of 0.8 feet. These statistics were gathered based on a large test set and so can be considered reliable. Considering the limited nature of this study, these results strongly indicate the feasibility of this approach, and the importance of appropriate preprocessing of neural network input data.

  6. Spectral Analysis Methods of Social Networks

    Directory of Open Access Journals (Sweden)

    P. G. Klyucharev

    2017-01-01

    Full Text Available Online social networks (such as Facebook, Twitter, VKontakte, etc. being an important channel for disseminating information are often used to arrange an impact on the social consciousness for various purposes - from advertising products or services to the full-scale information war thereby making them to be a very relevant object of research. The paper reviewed the analysis methods of social networks (primarily, online, based on the spectral theory of graphs. Such methods use the spectrum of the social graph, i.e. a set of eigenvalues of its adjacency matrix, and also the eigenvectors of the adjacency matrix.Described measures of centrality (in particular, centrality based on the eigenvector and PageRank, which reflect a degree of impact one or another user of the social network has. A very popular PageRank measure uses, as a measure of centrality, the graph vertices, the final probabilities of the Markov chain, whose matrix of transition probabilities is calculated on the basis of the adjacency matrix of the social graph. The vector of final probabilities is an eigenvector of the matrix of transition probabilities.Presented a method of dividing the graph vertices into two groups. It is based on maximizing the network modularity by computing the eigenvector of the modularity matrix.Considered a method for detecting bots based on the non-randomness measure of a graph to be computed using the spectral coordinates of vertices - sets of eigenvector components of the adjacency matrix of a social graph.In general, there are a number of algorithms to analyse social networks based on the spectral theory of graphs. These algorithms show very good results, but their disadvantage is the relatively high (albeit polynomial computational complexity for large graphs.At the same time it is obvious that the practical application capacity of the spectral graph theory methods is still underestimated, and it may be used as a basis to develop new methods.The work

  7. Cohesion network analysis of CSCL participation.

    Science.gov (United States)

    Dascalu, Mihai; McNamara, Danielle S; Trausan-Matu, Stefan; Allen, Laura K

    2017-04-13

    The broad use of computer-supported collaborative-learning (CSCL) environments (e.g., instant messenger-chats, forums, blogs in online communities, and massive open online courses) calls for automated tools to support tutors in the time-consuming process of analyzing collaborative conversations. In this article, the authors propose and validate the cohesion network analysis (CNA) model, housed within the ReaderBench platform. CNA, grounded in theories of cohesion, dialogism, and polyphony, is similar to social network analysis (SNA), but it also considers text content and discourse structure and, uniquely, uses automated cohesion indices to generate the underlying discourse representation. Thus, CNA enhances the power of SNA by explicitly considering semantic cohesion while modeling interactions between participants. The primary purpose of this article is to describe CNA analysis and to provide a proof of concept, by using ten chat conversations in which multiple participants debated the advantages of CSCL technologies. Each participant's contributions were human-scored on the basis of their relevance in terms of covering the central concepts of the conversation. SNA metrics, applied to the CNA sociogram, were then used to assess the quality of each member's degree of participation. The results revealed that the CNA indices were strongly correlated to the human evaluations of the conversations. Furthermore, a stepwise regression analysis indicated that the CNA indices collectively predicted 54% of the variance in the human ratings of participation. The results provide promising support for the use of automated computational assessments of collaborative participation and of individuals' degrees of active involvement in CSCL environments.

  8. NetworkAnalyst--integrative approaches for protein-protein interaction network analysis and visual exploration.

    Science.gov (United States)

    Xia, Jianguo; Benner, Maia J; Hancock, Robert E W

    2014-07-01

    Biological network analysis is a powerful approach to gain systems-level understanding of patterns of gene expression in different cell types, disease states and other biological/experimental conditions. Three consecutive steps are required--identification of genes or proteins of interest, network construction and network analysis and visualization. To date, researchers have to learn to use a combination of several tools to accomplish this task. In addition, interactive visualization of large networks has been primarily restricted to locally installed programs. To address these challenges, we have developed NetworkAnalyst, taking advantage of state-of-the-art web technologies, to enable high performance network analysis with rich user experience. NetworkAnalyst integrates all three steps and presents the results via a powerful online network visualization framework. Users can upload gene or protein lists, single or multiple gene expression datasets to perform comprehensive gene annotation and differential expression analysis. Significant genes are mapped to our manually curated protein-protein interaction database to construct relevant networks. The results are presented through standard web browsers for network analysis and interactive exploration. NetworkAnalyst supports common functions for network topology and module analyses. Users can easily search, zoom and highlight nodes or modules, as well as perform functional enrichment analysis on these selections. The networks can be customized with different layouts, colors or node sizes, and exported as PNG, PDF or GraphML files. Comprehensive FAQs, tutorials and context-based tips and instructions are provided. NetworkAnalyst currently supports protein-protein interaction network analysis for human and mouse and is freely available at http://www.networkanalyst.ca. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  9. Co-occurrence network analysis of Chinese and English poems

    Science.gov (United States)

    Liang, Wei; Wang, Yanli; Shi, Yuming; Chen, Guanrong

    2015-02-01

    A total of 572 co-occurrence networks of Chinese characters and words as well as English words are constructed from both Chinese and English poems. It is found that most of the networks have small-world features; more Chinese networks have scale-free properties and hierarchical structures as compared with the English networks; all the networks are disassortative, and the disassortativeness of the Chinese word networks is more prominent than those of the English networks; the spectral densities of the Chinese word networks and English networks are similar, but they are different from those of the ER, BA, and WS networks. For the above observed phenomena, analysis is provided with interpretation from a linguistic perspective.

  10. Comparing Social Network Analysis of Posts with Counting of Posts as a Measurement of Learners' Participation in Facebook Discussions

    Science.gov (United States)

    Lee, Hye Yeon; Lee, Hyeon Woo

    2016-01-01

    With the currently growing interest in social network services, many college courses use social network services as platforms for discussions, and a number of studies have been conducted on the use of social network analysis to measure students' participation in online discussions. This study aims to demonstrate the difference between counting…

  11. Comparative analysis of quantitative efficiency evaluation methods for transportation networks.

    Science.gov (United States)

    He, Yuxin; Qin, Jin; Hong, Jian

    2017-01-01

    An effective evaluation of transportation network efficiency could offer guidance for the optimal control of urban traffic. Based on the introduction and related mathematical analysis of three quantitative evaluation methods for transportation network efficiency, this paper compares the information measured by them, including network structure, traffic demand, travel choice behavior and other factors which affect network efficiency. Accordingly, the applicability of various evaluation methods is discussed. Through analyzing different transportation network examples it is obtained that Q-H method could reflect the influence of network structure, traffic demand and user route choice behavior on transportation network efficiency well. In addition, the transportation network efficiency measured by this method and Braess's Paradox can be explained with each other, which indicates a better evaluation of the real operation condition of transportation network. Through the analysis of the network efficiency calculated by Q-H method, it can also be drawn that a specific appropriate demand is existed to a given transportation network. Meanwhile, under the fixed demand, both the critical network structure that guarantees the stability and the basic operation of the network and a specific network structure contributing to the largest value of the transportation network efficiency can be identified.

  12. Analysis and monitoring design for networks

    Energy Technology Data Exchange (ETDEWEB)

    Fedorov, V.; Flanagan, D.; Rowan, T.; Batsell, S.

    1998-06-01

    The idea of applying experimental design methodologies to develop monitoring systems for computer networks is relatively novel even though it was applied in other areas such as meteorology, seismology, and transportation. One objective of a monitoring system should always be to collect as little data as necessary to be able to monitor specific parameters of the system with respect to assigned targets and objectives. This implies a purposeful monitoring where each piece of data has a reason to be collected and stored for future use. When a computer network system as large and complex as the Internet is the monitoring subject, providing an optimal and parsimonious observing system becomes even more important. Many data collection decisions must be made by the developers of a monitoring system. These decisions include but are not limited to the following: (1) The type data collection hardware and software instruments to be used; (2) How to minimize interruption of regular network activities during data collection; (3) Quantification of the objectives and the formulation of optimality criteria; (4) The placement of data collection hardware and software devices; (5) The amount of data to be collected in a given time period, how large a subset of the available data to collect during the period, the length of the period, and the frequency of data collection; (6) The determination of the data to be collected (for instance, selection of response and explanatory variables); (7) Which data will be retained and how long (i.e., data storage and retention issues); and (8) The cost analysis of experiments. Mathematical statistics, and, in particular, optimal experimental design methods, may be used to address the majority of problems generated by 3--7. In this study, the authors focus their efforts on topics 3--5.

  13. Will HIV vaccination reshape HIV risk behavior networks? A social network analysis of drug users' anticipated risk compensation.

    Science.gov (United States)

    Young, April M; Halgin, Daniel S; DiClemente, Ralph J; Sterk, Claire E; Havens, Jennifer R

    2014-01-01

    An HIV vaccine could substantially impact the epidemic. However, risk compensation (RC), or post-vaccination increase in risk behavior, could present a major challenge. The methodology used in previous studies of risk compensation has been almost exclusively individual-level in focus, and has not explored how increased risk behavior could affect the connectivity of risk networks. This study examined the impact of anticipated HIV vaccine-related RC on the structure of high-risk drug users' sexual and injection risk network. A sample of 433 rural drug users in the US provided data on their risk relationships (i.e., those involving recent unprotected sex and/or injection equipment sharing). Dyad-specific data were collected on likelihood of increasing/initiating risk behavior if they, their partner, or they and their partner received an HIV vaccine. Using these data and social network analysis, a "post-vaccination network" was constructed and compared to the current network on measures relevant to HIV transmission, including network size, cohesiveness (e.g., diameter, component structure, density), and centrality. Participants reported 488 risk relationships. Few reported an intention to decrease condom use or increase equipment sharing (4% and 1%, respectively). RC intent was reported in 30 existing risk relationships and vaccination was anticipated to elicit the formation of five new relationships. RC resulted in a 5% increase in risk network size (n = 142 to n = 149) and a significant increase in network density. The initiation of risk relationships resulted in the connection of otherwise disconnected network components, with the largest doubling in size from five to ten. This study demonstrates a new methodological approach to studying RC and reveals that behavior change following HIV vaccination could potentially impact risk network connectivity. These data will be valuable in parameterizing future network models that can determine if network-level change

  14. Social Network Analysis and Qualitative Interviews for Assessing Geographic Characteristics of Tourism Business Networks

    National Research Council Canada - National Science Library

    Kelman, Ilan; Luthe, Tobias; Wyss, Romano; Tørnblad, Silje H; Evers, Yvette; Curran, Marina Martin; Williams, Richard J; Berlow, Eric L

    2016-01-01

    This study integrates quantitative social network analysis (SNA) and qualitative interviews for understanding tourism business links in isolated communities through analysing spatial characteristics...

  15. 6th International Conference on Network Analysis

    CERN Document Server

    Nikolaev, Alexey; Pardalos, Panos; Prokopyev, Oleg

    2017-01-01

    This valuable source for graduate students and researchers provides a comprehensive introduction to current theories and applications in optimization methods and network models. Contributions to this book are focused on new efficient algorithms and rigorous mathematical theories, which can be used to optimize and analyze mathematical graph structures with massive size and high density induced by natural or artificial complex networks. Applications to social networks, power transmission grids, telecommunication networks, stock market networks, and human brain networks are presented. Chapters in this book cover the following topics: Linear max min fairness Heuristic approaches for high-quality solutions Efficient approaches for complex multi-criteria optimization problems Comparison of heuristic algorithms New heuristic iterative local search Power in network structures Clustering nodes in random graphs Power transmission grid structure Network decomposition problems Homogeneity hypothesis testing Network analy...

  16. Dynamical modeling and analysis of large cellular regulatory networks

    Science.gov (United States)

    Bérenguier, D.; Chaouiya, C.; Monteiro, P. T.; Naldi, A.; Remy, E.; Thieffry, D.; Tichit, L.

    2013-06-01

    The dynamical analysis of large biological regulatory networks requires the development of scalable methods for mathematical modeling. Following the approach initially introduced by Thomas, we formalize the interactions between the components of a network in terms of discrete variables, functions, and parameters. Model simulations result in directed graphs, called state transition graphs. We are particularly interested in reachability properties and asymptotic behaviors, which correspond to terminal strongly connected components (or "attractors") in the state transition graph. A well-known problem is the exponential increase of the size of state transition graphs with the number of network components, in particular when using the biologically realistic asynchronous updating assumption. To address this problem, we have developed several complementary methods enabling the analysis of the behavior of large and complex logical models: (i) the definition of transition priority classes to simplify the dynamics; (ii) a model reduction method preserving essential dynamical properties, (iii) a novel algorithm to compact state transition graphs and directly generate compressed representations, emphasizing relevant transient and asymptotic dynamical properties. The power of an approach combining these different methods is demonstrated by applying them to a recent multilevel logical model for the network controlling CD4+ T helper cell response to antigen presentation and to a dozen cytokines. This model accounts for the differentiation of canonical Th1 and Th2 lymphocytes, as well as of inflammatory Th17 and regulatory T cells, along with many hybrid subtypes. All these methods have been implemented into the software GINsim, which enables the definition, the analysis, and the simulation of logical regulatory graphs.

  17. Dynamical modeling and analysis of large cellular regulatory networks.

    Science.gov (United States)

    Bérenguier, D; Chaouiya, C; Monteiro, P T; Naldi, A; Remy, E; Thieffry, D; Tichit, L

    2013-06-01

    The dynamical analysis of large biological regulatory networks requires the development of scalable methods for mathematical modeling. Following the approach initially introduced by Thomas, we formalize the interactions between the components of a network in terms of discrete variables, functions, and parameters. Model simulations result in directed graphs, called state transition graphs. We are particularly interested in reachability properties and asymptotic behaviors, which correspond to terminal strongly connected components (or "attractors") in the state transition graph. A well-known problem is the exponential increase of the size of state transition graphs with the number of network components, in particular when using the biologically realistic asynchronous updating assumption. To address this problem, we have developed several complementary methods enabling the analysis of the behavior of large and complex logical models: (i) the definition of transition priority classes to simplify the dynamics; (ii) a model reduction method preserving essential dynamical properties, (iii) a novel algorithm to compact state transition graphs and directly generate compressed representations, emphasizing relevant transient and asymptotic dynamical properties. The power of an approach combining these different methods is demonstrated by applying them to a recent multilevel logical model for the network controlling CD4+ T helper cell response to antigen presentation and to a dozen cytokines. This model accounts for the differentiation of canonical Th1 and Th2 lymphocytes, as well as of inflammatory Th17 and regulatory T cells, along with many hybrid subtypes. All these methods have been implemented into the software GINsim, which enables the definition, the analysis, and the simulation of logical regulatory graphs.

  18. Integrated corridor management initiative : demonstration phase evaluation, San Diego institutional and organizational analysis test plan.

    Science.gov (United States)

    2012-08-01

    This report presents the test plan for conducting the Institutional and Organizational Analysis for the United States Department of Transportation (U.S. DOT) evaluation of the San Diego Integrated Corridor Management (ICM) Initiative Demonstration. T...

  19. Integrated corridor management initiative : demonstration phase evaluation - Dallas technical capability analysis test plan.

    Science.gov (United States)

    This report presents the test plan for conducting the Technical Capability Analysis for the United States : Department of Transportation (U.S. DOT) evaluation of the Dallas U.S. 75 Integrated Corridor : Management (ICM) Initiative Demonstration. The ...

  20. Integrated corridor management initiative : demonstration phase evaluation, San Diego technical capability analysis test plan.

    Science.gov (United States)

    2012-08-01

    This report presents the test plan for conducting the Technical Capability Analysis for the United States Department of Transportation (U.S. DOT) evaluation of the San Diego Integrated Corridor Management (ICM) Initiative Demonstration. The ICM proje...

  1. Integrated corridor management initiative : demonstration phase evaluation - San Diego benefit-cost analysis test plan.

    Science.gov (United States)

    This report presents the test plan for conducting the Benefit-Cost Analysis (BCA) for the United States : Department of Transportation (U.S. DOT) evaluation of the San Diego Integrated Corridor Management : (ICM) Initiative Demonstration. The ICM pro...

  2. Integrated corridor management initiative : demonstration phase evaluation, San Diego decision support system analysis test plan.

    Science.gov (United States)

    2012-08-01

    This report presents the test plan for conducting the Decision Support System Analysis for the United States Department of Transportation (U.S. DOT) evaluation of the San Diego Integrated Corridor Management (ICM) Initiative Demonstration. The ICM pr...

  3. Quantitative methods for ecological network analysis.

    Science.gov (United States)

    Ulanowicz, Robert E

    2004-12-01

    The analysis of networks of ecological trophic transfers is a useful complement to simulation modeling in the quest for understanding whole-ecosystem dynamics. Trophic networks can be studied in quantitative and systematic fashion at several levels. Indirect relationships between any two individual taxa in an ecosystem, which often differ in either nature or magnitude from their direct influences, can be assayed using techniques from linear algebra. The same mathematics can also be employed to ascertain where along the trophic continuum any individual taxon is operating, or to map the web of connections into a virtual linear chain that summarizes trophodynamic performance by the system. Backtracking algorithms with pruning have been written which identify pathways for the recycle of materials and energy within the system. The pattern of such cycling often reveals modes of control or types of functions exhibited by various groups of taxa. The performance of the system as a whole at processing material and energy can be quantified using information theory. In particular, the complexity of process interactions can be parsed into separate terms that distinguish organized, efficient performance from the capacity for further development and recovery from disturbance. Finally, the sensitivities of the information-theoretic system indices appear to identify the dynamical bottlenecks in ecosystem functioning.

  4. Dynamic analysis of biochemical network using complex network method

    Directory of Open Access Journals (Sweden)

    Wang Shuqiang

    2015-01-01

    Full Text Available In this study, the stochastic biochemical reaction model is proposed based on the law of mass action and complex network theory. The dynamics of biochemical reaction system is presented as a set of non-linear differential equations and analyzed at the molecular-scale. Given the initial state and the evolution rules of the biochemical reaction system, the system can achieve homeostasis. Compared with random graph, the biochemical reaction network has larger information capacity and is more efficient in information transmission. This is consistent with theory of evolution.

  5. Interdependent multi-layer networks: modeling and survivability analysis with applications to space-based networks.

    Science.gov (United States)

    Castet, Jean-Francois; Saleh, Joseph H

    2013-01-01

    This article develops a novel approach and algorithmic tools for the modeling and survivability analysis of networks with heterogeneous nodes, and examines their application to space-based networks. Space-based networks (SBNs) allow the sharing of spacecraft on-orbit resources, such as data storage, processing, and downlink. Each spacecraft in the network can have different subsystem composition and functionality, thus resulting in node heterogeneity. Most traditional survivability analyses of networks assume node homogeneity and as a result, are not suited for the analysis of SBNs. This work proposes that heterogeneous networks can be modeled as interdependent multi-layer networks, which enables their survivability analysis. The multi-layer aspect captures the breakdown of the network according to common functionalities across the different nodes, and it allows the emergence of homogeneous sub-networks, while the interdependency aspect constrains the network to capture the physical characteristics of each node. Definitions of primitives of failure propagation are devised. Formal characterization of interdependent multi-layer networks, as well as algorithmic tools for the analysis of failure propagation across the network are developed and illustrated with space applications. The SBN applications considered consist of several networked spacecraft that can tap into each other's Command and Data Handling subsystem, in case of failure of its own, including the Telemetry, Tracking and Command, the Control Processor, and the Data Handling sub-subsystems. Various design insights are derived and discussed, and the capability to perform trade-space analysis with the proposed approach for various network characteristics is indicated. The select results here shown quantify the incremental survivability gains (with respect to a particular class of threats) of the SBN over the traditional monolith spacecraft. Failure of the connectivity between nodes is also examined, and the

  6. Interdependent multi-layer networks: modeling and survivability analysis with applications to space-based networks.

    Directory of Open Access Journals (Sweden)

    Jean-Francois Castet

    Full Text Available This article develops a novel approach and algorithmic tools for the modeling and survivability analysis of networks with heterogeneous nodes, and examines their application to space-based networks. Space-based networks (SBNs allow the sharing of spacecraft on-orbit resources, such as data storage, processing, and downlink. Each spacecraft in the network can have different subsystem composition and functionality, thus resulting in node heterogeneity. Most traditional survivability analyses of networks assume node homogeneity and as a result, are not suited for the analysis of SBNs. This work proposes that heterogeneous networks can be modeled as interdependent multi-layer networks, which enables their survivability analysis. The multi-layer aspect captures the breakdown of the network according to common functionalities across the different nodes, and it allows the emergence of homogeneous sub-networks, while the interdependency aspect constrains the network to capture the physical characteristics of each node. Definitions of primitives of failure propagation are devised. Formal characterization of interdependent multi-layer networks, as well as algorithmic tools for the analysis of failure propagation across the network are developed and illustrated with space applications. The SBN applications considered consist of several networked spacecraft that can tap into each other's Command and Data Handling subsystem, in case of failure of its own, including the Telemetry, Tracking and Command, the Control Processor, and the Data Handling sub-subsystems. Various design insights are derived and discussed, and the capability to perform trade-space analysis with the proposed approach for various network characteristics is indicated. The select results here shown quantify the incremental survivability gains (with respect to a particular class of threats of the SBN over the traditional monolith spacecraft. Failure of the connectivity between nodes is also

  7. Analysis of Computer Network Information Based on "Big Data"

    Science.gov (United States)

    Li, Tianli

    2017-11-01

    With the development of the current era, computer network and large data gradually become part of the people's life, people use the computer to provide convenience for their own life, but at the same time there are many network information problems has to pay attention. This paper analyzes the information security of computer network based on "big data" analysis, and puts forward some solutions.

  8. Road Transport Network Analysis In Port-Harcourt Metropolics ...

    African Journals Online (AJOL)

    Road transport network contributes to the economy of an area as it connects points of origin to destinations. The thrust of this article therefore, is on the analysis of the road networks in Port – Harcourt metropolis with the aim of determining the connectivity of the road networks and the most accessible node. Consequently ...

  9. Neural network analysis of varying trends in real exchange rates

    NARCIS (Netherlands)

    J.F. Kaashoek (Johan); H.K. van Dijk (Herman)

    1999-01-01

    textabstractIn this paper neural networks are fitted to the real exchange rates of seven industrialized countries. The size and topology of the used networks is found by reducing the size of the network through the use of multiple correlation coefficients, principal component analysis of residuals

  10. Graph theoretical analysis and application of fMRI-based brain network in Alzheimer's disease

    Directory of Open Access Journals (Sweden)

    LIU Xue-na

    2012-08-01

    Full Text Available Alzheimer's disease (AD, a progressive neurodegenerative disease, is clinically characterized by impaired memory and many other cognitive functions. However, the pathophysiological mechanisms underlying the disease are not thoroughly understood. In recent years, using functional magnetic resonance imaging (fMRI as well as advanced graph theory based network analysis approach, several studies of patients with AD suggested abnormal topological organization in both global and regional properties of functional brain networks, specifically, as demonstrated by a loss of small-world network characteristics. These studies provide novel insights into the pathophysiological mechanisms of AD and could be helpful in developing imaging biomarkers for disease diagnosis. In this paper we introduce the essential concepts of complex brain networks theory, and review recent advances of the study on human functional brain networks in AD, especially focusing on the graph theoretical analysis of small-world network based on fMRI. We also propound the existent problems and research orientation.

  11. Method and tool for network vulnerability analysis

    Science.gov (United States)

    Swiler, Laura Painton [Albuquerque, NM; Phillips, Cynthia A [Albuquerque, NM

    2006-03-14

    A computer system analysis tool and method that will allow for qualitative and quantitative assessment of security attributes and vulnerabilities in systems including computer networks. The invention is based on generation of attack graphs wherein each node represents a possible attack state and each edge represents a change in state caused by a single action taken by an attacker or unwitting assistant. Edges are weighted using metrics such as attacker effort, likelihood of attack success, or time to succeed. Generation of an attack graph is accomplished by matching information about attack requirements (specified in "attack templates") to information about computer system configuration (contained in a configuration file that can be updated to reflect system changes occurring during the course of an attack) and assumed attacker capabilities (reflected in "attacker profiles"). High risk attack paths, which correspond to those considered suited to application of attack countermeasures given limited resources for applying countermeasures, are identified by finding "epsilon optimal paths."

  12. Demonstrating Reflection: A Content Analysis of Reflection That English Teacher Candidates Demonstrate in Writing after Conducting Classroom Inquiry

    Science.gov (United States)

    Kerns, Bill

    2014-01-01

    This study is an analysis of the depth of reflection exhibited in written documents produced by English teacher candidates. Description and insights were drawn into the reflective thinking of the undergraduate teacher candidates in the context of teacher research essays that they produced. Reflection is widely viewed as enabling teacher candidates…

  13. Co-occurrence network analysis of modern Chinese poems

    Science.gov (United States)

    Liang, Wei; Wang, Yanli; Shi, Yuming; Chen, Guanrong

    2015-02-01

    A total of 606 co-occurrence networks of Chinese characters and words are constructed from rhymes, free verses, and prose poems. It is found that 98.5 % of networks have scale-free properties, while 19.8 % of networks do not have small-world features, especially the clustering coefficients in 5.6 % of networks are zero. In addition, 61.4 % of networks have significant hierarchical structures, and 98 % of networks are disassortative. For the above observed phenomena, analysis is provided with interpretation from a linguistic perspective.

  14. Predicting disease associations via biological network analysis.

    Science.gov (United States)

    Sun, Kai; Gonçalves, Joana P; Larminie, Chris; Przulj, Nataša

    2014-09-17

    Understanding the relationship between diseases based on the underlying biological mechanisms is one of the greatest challenges in modern biology and medicine. Exploring disease-disease associations by using system-level biological data is expected to improve our current knowledge of disease relationships, which may lead to further improvements in disease diagnosis, prognosis and treatment. We took advantage of diverse biological data including disease-gene associations and a large-scale molecular network to gain novel insights into disease relationships. We analysed and compared four publicly available disease-gene association datasets, then applied three disease similarity measures, namely annotation-based measure, function-based measure and topology-based measure, to estimate the similarity scores between diseases. We systematically evaluated disease associations obtained by these measures against a statistical measure of comorbidity which was derived from a large number of medical patient records. Our results show that the correlation between our similarity measures and comorbidity scores is substantially higher than expected at random, confirming that our similarity measures are able to recover comorbidity associations. We also demonstrated that our predicted disease associations correlated with disease associations generated from genome-wide association studies significantly higher than expected at random. Furthermore, we evaluated our predicted disease associations via mining the literature on PubMed, and presented case studies to demonstrate how these novel disease associations can be used to enhance our current knowledge of disease relationships. We present three similarity measures for predicting disease associations. The strong correlation between our predictions and known disease associations demonstrates the ability of our measures to provide novel insights into disease relationships.

  15. Complex Network Analysis of Brazilian Power Grid

    CERN Document Server

    Martins, Gabriela C; Ribeiro, Fabiano L; Forgerini, Fabricio L

    2016-01-01

    Power Grids and other delivery networks has been attracted some attention by the network literature last decades. Despite the Power Grids dynamics has been controlled by computer systems and human operators, the static features of this type of network can be studied and analyzed. The topology of the Brazilian Power Grid (BPG) was studied in this work. We obtained the spatial structure of the BPG from the ONS (electric systems national operator), consisting of high-voltage transmission lines, generating stations and substations. The local low-voltage substations and local power delivery as well the dynamic features of the network were neglected. We analyze the complex network of the BPG and identify the main topological information, such as the mean degree, the degree distribution, the network size and the clustering coefficient to caracterize the complex network. We also detected the critical locations on the network and, therefore, the more susceptible points to lead to a cascading failure and even to a blac...

  16. Advanced functional network analysis in the geosciences: The pyunicorn package

    Science.gov (United States)

    Donges, Jonathan F.; Heitzig, Jobst; Runge, Jakob; Schultz, Hanna C. H.; Wiedermann, Marc; Zech, Alraune; Feldhoff, Jan; Rheinwalt, Aljoscha; Kutza, Hannes; Radebach, Alexander; Marwan, Norbert; Kurths, Jürgen

    2013-04-01

    Functional networks are a powerful tool for analyzing large geoscientific datasets such as global fields of climate time series originating from observations or model simulations. pyunicorn (pythonic unified complex network and recurrence analysis toolbox) is an open-source, fully object-oriented and easily parallelizable package written in the language Python. It allows for constructing functional networks (aka climate networks) representing the structure of statistical interrelationships in large datasets and, subsequently, investigating this structure using advanced methods of complex network theory such as measures for networks of interacting networks, node-weighted statistics or network surrogates. Additionally, pyunicorn allows to study the complex dynamics of geoscientific systems as recorded by time series by means of recurrence networks and visibility graphs. The range of possible applications of the package is outlined drawing on several examples from climatology.

  17. The network researchers' network: A social network analysis of the IMP Group 1985-2006

    DEFF Research Database (Denmark)

    Henneberg, Stephan C. M.; Ziang, Zhizhong; Naudé, Peter

    ). In this paper, based upon the papers presented at the 22 conferences held to date, we undertake a Social Network Analysis in order to examine the degree of co-publishing that has taken place between this group of researchers. We identify the different components in this database, and examine the large main...... components in some detail. The egonets of three of the original 'founding fathers' are examined in detail, and we draw comparisons as to how their publishing strategies vary. Finally, the paper draws some more general conclusions as to the insights that SNA can bring to those working within business...

  18. Analysis of neural networks through base functions

    NARCIS (Netherlands)

    van der Zwaag, B.J.; Slump, Cornelis H.; Spaanenburg, L.

    Problem statement. Despite their success-story, neural networks have one major disadvantage compared to other techniques: the inability to explain comprehensively how a trained neural network reaches its output; neural networks are not only (incorrectly) seen as a "magic tool" but possibly even more

  19. Synchronization analysis of coloured delayed networks under ...

    Indian Academy of Sciences (India)

    This paper investigates synchronization of coloured delayed networks under decentralized pinning intermittent control. To begin with, the time delays are taken into account in the coloured networks. In addition, we propose a decentralized pinning intermittent control for coloured delayed networks, which is different from that ...

  20. Spectral Modelling for Spatial Network Analysis

    NARCIS (Netherlands)

    Nourian, P.; Rezvani, S.; Sariyildiz, I.S.; van der Hoeven, F.D.; Attar, Ramtin; Chronis, Angelos; Hanna, Sean; Turrin, Michela

    2016-01-01

    Spatial Networks represent the connectivity structure between units of space as a weighted graph whose links are weighted as to the strength of connections. In case of urban spatial networks, the units of space correspond closely to streets and in architectural spatial networks the units correspond

  1. Comparative analysis of weighted gene co-expression networks in human and mouse.

    Science.gov (United States)

    Eidsaa, Marius; Stubbs, Lisa; Almaas, Eivind

    2017-01-01

    The application of complex network modeling to analyze large co-expression data sets has gained traction during the last decade. In particular, the use of the weighted gene co-expression network analysis framework has allowed an unbiased and systems-level investigation of genotype-phenotype relationships in a wide range of systems. Since mouse is an important model organism for biomedical research on human disease, it is of great interest to identify similarities and differences in the functional roles of human and mouse orthologous genes. Here, we develop a novel network comparison approach which we demonstrate by comparing two gene-expression data sets from a large number of human and mouse tissues. The method uses weighted topological overlap alongside the recently developed network-decomposition method of s-core analysis, which is suitable for making gene-centrality rankings for weighted networks. The aim is to identify globally central genes separately in the human and mouse networks. By comparing the ranked gene lists, we identify genes that display conserved or diverged centrality-characteristics across the networks. This framework only assumes a single threshold value that is chosen from a statistical analysis, and it may be applied to arbitrary network structures and edge-weight distributions, also outside the context of biology. When conducting the comparative network analysis, both within and across the two species, we find a clear pattern of enrichment of transcription factors, for the homeobox domain in particular, among the globally central genes. We also perform gene-ontology term enrichment analysis and look at disease-related genes for the separate networks as well as the network comparisons. We find that gene ontology terms related to regulation and development are generally enriched across the networks. In particular, the genes FOXE3, RHO, RUNX2, ALX3 and RARA, which are disease genes in either human or mouse, are on the top-10 list of globally

  2. Data Farming Process and Initial Network Analysis Capabilities

    Directory of Open Access Journals (Sweden)

    Gary Horne

    2016-01-01

    Full Text Available Data Farming, network applications and approaches to integrate network analysis and processes to the data farming paradigm are presented as approaches to address complex system questions. Data Farming is a quantified approach that examines questions in large possibility spaces using modeling and simulation. It evaluates whole landscapes of outcomes to draw insights from outcome distributions and outliers. Social network analysis and graph theory are widely used techniques for the evaluation of social systems. Incorporation of these techniques into the data farming process provides analysts examining complex systems with a powerful new suite of tools for more fully exploring and understanding the effect of interactions in complex systems. The integration of network analysis with data farming techniques provides modelers with the capability to gain insight into the effect of network attributes, whether the network is explicitly defined or emergent, on the breadth of the model outcome space and the effect of model inputs on the resultant network statistics.

  3. A system of recurrent neural networks for modularising, parameterising and dynamic analysis of cell signalling networks.

    Science.gov (United States)

    Samarasinghe, S; Ling, H

    parameters and protein concentrations similar to the original RNN system. Results thus demonstrated the reliability of the proposed RNN method for modelling relatively large networks by modularisation for practical settings. Advantages of the method are its ability to represent accurate continuous system dynamics and ease of: parameter estimation through training with data from a practical setting, model analysis (40% faster than ODE), fine tuning parameters when more data are available, sub-model extension when new elements and/or interactions come to light and model expansion with addition of sub-models. Copyright © 2017 Elsevier B.V. All rights reserved.

  4. Deep Learning Neural Networks and Bayesian Neural Networks in Data Analysis

    Science.gov (United States)

    Chernoded, Andrey; Dudko, Lev; Myagkov, Igor; Volkov, Petr

    2017-10-01

    Most of the modern analyses in high energy physics use signal-versus-background classification techniques of machine learning methods and neural networks in particular. Deep learning neural network is the most promising modern technique to separate signal and background and now days can be widely and successfully implemented as a part of physical analysis. In this article we compare Deep learning and Bayesian neural networks application as a classifiers in an instance of top quark analysis.

  5. Deep Learning Neural Networks and Bayesian Neural Networks in Data Analysis

    Directory of Open Access Journals (Sweden)

    Chernoded Andrey

    2017-01-01

    Full Text Available Most of the modern analyses in high energy physics use signal-versus-background classification techniques of machine learning methods and neural networks in particular. Deep learning neural network is the most promising modern technique to separate signal and background and now days can be widely and successfully implemented as a part of physical analysis. In this article we compare Deep learning and Bayesian neural networks application as a classifiers in an instance of top quark analysis.

  6. Privacy Breach Analysis in Social Networks

    Science.gov (United States)

    Nagle, Frank

    This chapter addresses various aspects of analyzing privacy breaches in social networks. We first review literature that defines three types of privacy breaches in social networks: interactive, active, and passive. We then survey the various network anonymization schemes that have been constructed to address these privacy breaches. After exploring these breaches and anonymization schemes, we evaluate a measure for determining the level of anonymity inherent in a network graph based on its topological structure. Finally, we close by emphasizing the difficulty of anonymizing social network data while maintaining usability for research purposes and offering areas for future work.

  7. First field demonstration of cloud datacenter workflow automation employing dynamic optical transport network resources under OpenStack and OpenFlow orchestration.

    Science.gov (United States)

    Szyrkowiec, Thomas; Autenrieth, Achim; Gunning, Paul; Wright, Paul; Lord, Andrew; Elbers, Jörg-Peter; Lumb, Alan

    2014-02-10

    For the first time, we demonstrate the orchestration of elastic datacenter and inter-datacenter transport network resources using a combination of OpenStack and OpenFlow. Programmatic control allows a datacenter operator to dynamically request optical lightpaths from a transport network operator to accommodate rapid changes of inter-datacenter workflows.

  8. Applied and computational harmonic analysis on graphs and networks

    Science.gov (United States)

    Irion, Jeff; Saito, Naoki

    2015-09-01

    In recent years, the advent of new sensor technologies and social network infrastructure has provided huge opportunities and challenges for analyzing data recorded on such networks. In the case of data on regular lattices, computational harmonic analysis tools such as the Fourier and wavelet transforms have well-developed theories and proven track records of success. It is therefore quite important to extend such tools from the classical setting of regular lattices to the more general setting of graphs and networks. In this article, we first review basics of graph Laplacian matrices, whose eigenpairs are often interpreted as the frequencies and the Fourier basis vectors on a given graph. We point out, however, that such an interpretation is misleading unless the underlying graph is either an unweighted path or cycle. We then discuss our recent effort of constructing multiscale basis dictionaries on a graph, including the Hierarchical Graph Laplacian Eigenbasis Dictionary and the Generalized Haar-Walsh Wavelet Packet Dictionary, which are viewed as generalizations of the classical hierarchical block DCTs and the Haar-Walsh wavelet packets, respectively, to the graph setting. Finally, we demonstrate the usefulness of our dictionaries by using them to simultaneously segment and denoise 1-D noisy signals sampled on regular lattices, a problem where classical tools have difficulty.

  9. Noniterative convex optimization methods for network component analysis.

    Science.gov (United States)

    Jacklin, Neil; Ding, Zhi; Chen, Wei; Chang, Chunqi

    2012-01-01

    This work studies the reconstruction of gene regulatory networks by the means of network component analysis (NCA). We will expound a family of convex optimization-based methods for estimating the transcription factor control strengths and the transcription factor activities (TFAs). The approach taken in this work is to decompose the problem into a network connectivity strength estimation phase and a transcription factor activity estimation phase. In the control strength estimation phase, we formulate a new subspace-based method incorporating a choice of multiple error metrics. For the source estimation phase we propose a total least squares (TLS) formulation that generalizes many existing methods. Both estimation procedures are noniterative and yield the optimal estimates according to various proposed error metrics. We test the performance of the proposed algorithms on simulated data and experimental gene expression data for the yeast Saccharomyces cerevisiae and demonstrate that the proposed algorithms have superior effectiveness in comparison with both Bayesian Decomposition (BD) and our previous FastNCA approach, while the computational complexity is still orders of magnitude less than BD.

  10. Multiscale analysis of river networks using the R package linbin

    Science.gov (United States)

    Welty, Ethan Z.; Torgersen, Christian E.; Brenkman, Samuel J.; Duda, Jeffrey J.; Armstrong, Jonathan B.

    2015-01-01

    Analytical tools are needed in riverine science and management to bridge the gap between GIS and statistical packages that were not designed for the directional and dendritic structure of streams. We introduce linbin, an R package developed for the analysis of riverscapes at multiple scales. With this software, riverine data on aquatic habitat and species distribution can be scaled and plotted automatically with respect to their position in the stream network or—in the case of temporal data—their position in time. The linbin package aggregates data into bins of different sizes as specified by the user. We provide case studies illustrating the use of the software for (1) exploring patterns at different scales by aggregating variables at a range of bin sizes, (2) comparing repeat observations by aggregating surveys into bins of common coverage, and (3) tailoring analysis to data with custom bin designs. Furthermore, we demonstrate the utility of linbin for summarizing patterns throughout an entire stream network, and we analyze the diel and seasonal movements of tagged fish past a stationary receiver to illustrate how linbin can be used with temporal data. In short, linbin enables more rapid analysis of complex data sets by fisheries managers and stream ecologists and can reveal underlying spatial and temporal patterns of fish distribution and habitat throughout a riverscape.

  11. Network analysis and synthesis a modern systems theory approach

    CERN Document Server

    Anderson, Brian D O

    2006-01-01

    Geared toward upper-level undergraduates and graduate students, this book offers a comprehensive look at linear network analysis and synthesis. It explores state-space synthesis as well as analysis, employing modern systems theory to unite the classical concepts of network theory. The authors stress passive networks but include material on active networks. They avoid topology in dealing with analysis problems and discuss computational techniques. The concepts of controllability, observability, and degree are emphasized in reviewing the state-variable description of linear systems. Explorations

  12. Sensor Network Information Analytical Methods: Analysis of Similarities and Differences

    Directory of Open Access Journals (Sweden)

    Chen Jian

    2014-04-01

    Full Text Available In the Sensor Network information engineering literature, few references focus on the definition and design of Sensor Network information analytical methods. Among those that do are Munson, et al. and the ISO standards on functional size analysis. To avoid inconsistent vocabulary and potentially incorrect interpretation of data, Sensor Network information analytical methods must be better designed, including definitions, analysis principles, analysis rules, and base units. This paper analyzes the similarities and differences across three different views of analytical methods, and uses a process proposed for the design of Sensor Network information analytical methods to analyze two examples of such methods selected from the literature.

  13. State of the art applications of social network analysis

    CERN Document Server

    Can, Fazli; Polat, Faruk

    2014-01-01

    Social network analysis increasingly bridges the discovery of patterns in diverse areas of study as more data becomes available and complex. Yet the construction of huge networks from large data often requires entirely different approaches for analysis including; graph theory, statistics, machine learning and data mining. This work covers frontier studies on social network analysis and mining from different perspectives such as social network sites, financial data, e-mails, forums, academic research funds, XML technology, blog content, community detection and clique finding, prediction of user

  14. Investigating communication networks contextually: Qualitative network analysis as cross-media research

    Directory of Open Access Journals (Sweden)

    Andreas Hepp

    2016-06-01

    Full Text Available This article introduces the approach of contextualised communication network analysis as a qualitative procedure for researching communicative relationships realised through the media. It combines qualitative interviews on media appropriation, egocentric network maps, and media diaries. Through the triangulation of these methods of data collection, it is possible to gain a differentiated insight into the specific meanings, structures and processes of communication networks across a variety of media. The approach is illustrated using a recent study dealing with the mediatisation of community building among young people. In this context, the qualitative communication network analysis has been applied to distinguish “localists” from “centrists”, “multilocalists”, and “pluralists”. These different “horizons of mediatised communitisation” are connected to distinct communication networks. Since this involves today a variety of different media, the contextual analysis of communication networks necessarily has to imply a cross-media perspective.

  15. A window on emergent European social network analysis

    OpenAIRE

    Cronin, Bruce

    2011-01-01

    This paper introduces the collection of papers in this issue, providing context in the recent development of social network analysis in Europe and the catalytic contributions of the Essex University Summer School and latterly the UK Social Networks Association. While these organisations have provided important focuses for social network analysis in the UK their reach has been much broader, principally among graduate students across Europe and the emergent research agenda they are forging. Fiv...

  16. Methodologies and techniques for analysis of network flow data

    Energy Technology Data Exchange (ETDEWEB)

    Bobyshev, A.; Grigoriev, M.; /Fermilab

    2004-12-01

    Network flow data gathered at the border routers and core switches is used at Fermilab for statistical analysis of traffic patterns, passive network monitoring, and estimation of network performance characteristics. Flow data is also a critical tool in the investigation of computer security incidents. Development and enhancement of flow based tools is an on-going effort. This paper describes the most recent developments in flow analysis at Fermilab.

  17. Reliability Analysis of Wireless Sensor Networks Using Markovian Model

    Directory of Open Access Journals (Sweden)

    Jin Zhu

    2012-01-01

    Full Text Available This paper investigates reliability analysis of wireless sensor networks whose topology is switching among possible connections which are governed by a Markovian chain. We give the quantized relations between network topology, data acquisition rate, nodes' calculation ability, and network reliability. By applying Lyapunov method, sufficient conditions of network reliability are proposed for such topology switching networks with constant or varying data acquisition rate. With the conditions satisfied, the quantity of data transported over wireless network node will not exceed node capacity such that reliability is ensured. Our theoretical work helps to provide a deeper understanding of real-world wireless sensor networks, which may find its application in the fields of network design and topology control.

  18. Centrality measures in temporal networks with time series analysis

    Science.gov (United States)

    Huang, Qiangjuan; Zhao, Chengli; Zhang, Xue; Wang, Xiaojie; Yi, Dongyun

    2017-05-01

    The study of identifying important nodes in networks has a wide application in different fields. However, the current researches are mostly based on static or aggregated networks. Recently, the increasing attention to networks with time-varying structure promotes the study of node centrality in temporal networks. In this paper, we define a supra-evolution matrix to depict the temporal network structure. With using of the time series analysis, the relationships between different time layers can be learned automatically. Based on the special form of the supra-evolution matrix, the eigenvector centrality calculating problem is turned into the calculation of eigenvectors of several low-dimensional matrices through iteration, which effectively reduces the computational complexity. Experiments are carried out on two real-world temporal networks, Enron email communication network and DBLP co-authorship network, the results of which show that our method is more efficient at discovering the important nodes than the common aggregating method.

  19. The reconstruction and analysis of tissue specific human metabolic networks.

    Science.gov (United States)

    Hao, Tong; Ma, Hong-Wu; Zhao, Xue-Ming; Goryanin, Igor

    2012-02-01

    Human tissues have distinct biological functions. Many proteins/enzymes are known to be expressed only in specific tissues and therefore the metabolic networks in various tissues are different. Though high quality global human metabolic networks and metabolic networks for certain tissues such as liver have already been studied, a systematic study of tissue specific metabolic networks for all main tissues is still missing. In this work, we reconstruct the tissue specific metabolic networks for 15 main tissues in human based on the previously reconstructed Edinburgh Human Metabolic Network (EHMN). The tissue information is firstly obtained for enzymes from Human Protein Reference Database (HPRD) and UniprotKB databases and transfers to reactions through the enzyme-reaction relationships in EHMN. As our knowledge of tissue distribution of proteins is still very limited, we replenish the tissue information of the metabolic network based on network connectivity analysis and thorough examination of the literature. Finally, about 80% of proteins and reactions in EHMN are determined to be in at least one of the 15 tissues. To validate the quality of the tissue specific network, the brain specific metabolic network is taken as an example for functional module analysis and the results reveal that the function of the brain metabolic network is closely related with its function as the centre of the human nervous system. The tissue specific human metabolic networks are available at .

  20. Exploratory social network analysis with Pajek. - 2nd ed.

    NARCIS (Netherlands)

    de Nooy, W.; Mrvar, A.; Batagelj, V.

    2011-01-01

    This is an extensively revised and expanded second edition of the successful textbook on social network analysis integrating theory, applications, and network analysis using Pajek. The main structural concepts and their applications in social research are introduced with exercises. Pajek software

  1. Efficient health care service delivery using network analysis: a case ...

    African Journals Online (AJOL)

    Efficient health care service delivery using network analysis: a case study of Kwara State, Nigeria. ... Ethiopian Journal of Environmental Studies and Management ... This paper addresses challenges with prompt health care delivery using Network Analysis of Critical Path Model (CPM) to plan the hospital capacity with a ...

  2. A Social Network Analysis of Occupational Segregation

    OpenAIRE

    Buhai, Sebastian; van der Leij, Marco

    2006-01-01

    We develop a social network model of occupational segregation between different social groups, generated by the existence of positive inbreeding bias among individuals from the same group. If network referrals are important in getting a job, then expected inbreeding bias in the contact network structure induces different career choices for individuals from different social groups. This further translates into stable occupational segregation equilibria in the labour market. We derive the condi...

  3. Complex Network Analysis of Pakistan Railways

    Directory of Open Access Journals (Sweden)

    Yasir Tariq Mohmand

    2014-01-01

    Full Text Available We study the structural properties of Pakistan railway network (PRN, where railway stations are considered as nodes while edges are represented by trains directly linking two stations. The network displays small world properties and is assortative in nature. Based on betweenness and closeness centralities of the nodes, the most important cities are identified with respect to connectivity as this could help in identifying the potential congestion points in the network.

  4. MONGKIE: an integrated tool for network analysis and visualization for multi-omics data.

    Science.gov (United States)

    Jang, Yeongjun; Yu, Namhee; Seo, Jihae; Kim, Sun; Lee, Sanghyuk

    2016-03-18

    Network-based integrative analysis is a powerful technique for extracting biological insights from multilayered omics data such as somatic mutations, copy number variations, and gene expression data. However, integrated analysis of multi-omics data is quite complicated and can hardly be done in an automated way. Thus, a powerful interactive visual mining tool supporting diverse analysis algorithms for identification of driver genes and regulatory modules is much needed. Here, we present a software platform that integrates network visualization with omics data analysis tools seamlessly. The visualization unit supports various options for displaying multi-omics data as well as unique network models for describing sophisticated biological networks such as complex biomolecular reactions. In addition, we implemented diverse in-house algorithms for network analysis including network clustering and over-representation analysis. Novel functions include facile definition and optimized visualization of subgroups, comparison of a series of data sets in an identical network by data-to-visual mapping and subsequent overlaying function, and management of custom interaction networks. Utility of MONGKIE for network-based visual data mining of multi-omics data was demonstrated by analysis of the TCGA glioblastoma data. MONGKIE was developed in Java based on the NetBeans plugin architecture, thus being OS-independent with intrinsic support of module extension by third-party developers. We believe that MONGKIE would be a valuable addition to network analysis software by supporting many unique features and visualization options, especially for analysing multi-omics data sets in cancer and other diseases. .

  5. Analysis of friendship network from MMORPG based data

    OpenAIRE

    Črnigoj, Dean

    2016-01-01

    This work analyzes friendship network from a Massively Multiplayer Online Role-Playing Game (MMORPG). The network is based on data from a private server that was active from 2007 until 2011. The work conducts a standard analysis of the network and then divides players according to different groups based on their activity. Work checks how friendship network can be correlated to the clan (a self-organized group of players who often form a league and play on the same side in a match) network. Ma...

  6. Unified Tractable Model for Large-Scale Networks Using Stochastic Geometry: Analysis and Design

    KAUST Repository

    Afify, Laila H.

    2016-12-01

    MIMO schemes, describe the relation between the diverse network parameters and configurations, and study the impact of temporal interference correlation on the performance of large-scale networks. Finally, we investigate some interference management techniques by exploiting the proposed framework. The proposed framework is compared to the exact analysis as well as intensive Monte Carlo simulations to demonstrate the model accuracy. The developed work casts a thorough inclusive study that is beneficial to deepen the understanding of the stochastic deployment of the next-generation large-scale wireless networks and predict their performance.

  7. Topology association analysis in weighted protein interaction network for gene prioritization

    Science.gov (United States)

    Wu, Shunyao; Shao, Fengjing; Zhang, Qi; Ji, Jun; Xu, Shaojie; Sun, Rencheng; Sun, Gengxin; Du, Xiangjun; Sui, Yi

    2016-11-01

    Although lots of algorithms for disease gene prediction have been proposed, the weights of edges are rarely taken into account. In this paper, the strengths of topology associations between disease and essential genes are analyzed in weighted protein interaction network. Empirical analysis demonstrates that compared to other genes, disease genes are weakly connected with essential genes in protein interaction network. Based on this finding, a novel global distance measurement for gene prioritization with weighted protein interaction network is proposed in this paper. Positive and negative flow is allocated to disease and essential genes, respectively. Additionally network propagation model is extended for weighted network. Experimental results on 110 diseases verify the effectiveness and potential of the proposed measurement. Moreover, weak links play more important role than strong links for gene prioritization, which is meaningful to deeply understand protein interaction network.

  8. Dynamical Networks for Smog Pattern Analysis

    CERN Document Server

    Zong, Linqi; Zhu, Jia

    2015-01-01

    Smog, as a form of air pollution, poses as a serious problem to the environment, health, and economy of the world[1-4] . Previous studies on smog mostly focused on the components and the effects of smog [5-10]. However, as the smog happens with increased frequency and duration, the smog pattern which is critical for smog forecast and control, is rarely investigated, mainly due to the complexity of the components, the causes, and the spreading processes of smog. Here we report the first analysis on smog pattern applying the model of dynamical networks with spontaneous recovery. We show that many phenomena such as the sudden outbreak and dissipation of smog and the long duration smog can be revealed with the mathematical mechanism under a random walk simulation. We present real-world air quality index data in accord with the predictions of the model. Also we found that compared to external causes such as pollution spreading from nearby, internal causes such as industrial pollution and vehicle emission generated...

  9. Fractal and multifractal analysis of complex networks: Estonian network of payments

    Science.gov (United States)

    Rendón de la Torre, Stephanie; Kalda, Jaan; Kitt, Robert; Engelbrecht, Jüri

    2017-12-01

    Complex networks have gained much attention from different areas of knowledge in recent years. Particularly, the structures and dynamics of such systems have attracted considerable interest. Complex networks may have characteristics of multifractality. In this study, we analyze fractal and multifractal properties of a novel network: the large scale economic network of payments of Estonia, where companies are represented by nodes and the payments done between companies are represented by links. We present a fractal scaling analysis and examine the multifractal behavior of this network by using a sandbox algorithm. Our results indicate the existence of multifractality in this network and consequently, the existence of multifractality in the Estonian economy. To the best of our knowledge, this is the first study that analyzes multifractality of a complex network of payments.

  10. A Social Network Analysis of Occupational Segregation

    NARCIS (Netherlands)

    I.S. Buhai (Sebastian); M.J. van der Leij (Marco)

    2006-01-01

    textabstractThis paper proposes a simple social network model of occupational segregation, generated by the existence of inbreeding bias among individuals of the same social group. If network referrals are important in getting a job, then expected inbreeding bias in the social structure results in

  11. ANNA: A Convolutional Neural Network Code for Spectroscopic Analysis

    Science.gov (United States)

    Lee-Brown, Donald; Anthony-Twarog, Barbara J.; Twarog, Bruce A.

    2018-01-01

    We present ANNA, a Python-based convolutional neural network code for the automated analysis of stellar spectra. ANNA provides a flexible framework that allows atmospheric parameters such as temperature and metallicity to be determined with accuracies comparable to those of established but less efficient techniques. ANNA performs its parameterization extremely quickly; typically several thousand spectra can be analyzed in less than a second. Additionally, the code incorporates features which greatly speed up the training process necessary for the neural network to measure spectra accurately, resulting in a tool that can easily be run on a single desktop or laptop computer. Thus, ANNA is useful in an era when spectrographs increasingly have the capability to collect dozens to hundreds of spectra each night. This talk will cover the basic features included in ANNA and demonstrate its performance in two use cases: an open cluster abundance analysis involving several hundred spectra, and a metal-rich field star study. Applicability of the code to large survey datasets will also be discussed.

  12. Insights into the Ecology and Evolution of Polyploid Plants through Network Analysis.

    Science.gov (United States)

    Gallagher, Joseph P; Grover, Corrinne E; Hu, Guanjing; Wendel, Jonathan F

    2016-06-01

    Polyploidy is a widespread phenomenon throughout eukaryotes, with important ecological and evolutionary consequences. Although genes operate as components of complex pathways and networks, polyploid changes in genes and gene expression have typically been evaluated as either individual genes or as a part of broad-scale analyses. Network analysis has been fruitful in associating genomic and other 'omic'-based changes with phenotype for many systems. In polyploid species, network analysis has the potential not only to facilitate a better understanding of the complex 'omic' underpinnings of phenotypic and ecological traits common to polyploidy, but also to provide novel insight into the interaction among duplicated genes and genomes. This adds perspective to the global patterns of expression (and other 'omic') change that accompany polyploidy and to the patterns of recruitment and/or loss of genes following polyploidization. While network analysis in polyploid species faces challenges common to other analyses of duplicated genomes, present technologies combined with thoughtful experimental design provide a powerful system to explore polyploid evolution. Here, we demonstrate the utility and potential of network analysis to questions pertaining to polyploidy with an example involving evolution of the transgressively superior cotton fibres found in polyploid Gossypium hirsutum. By combining network analysis with prior knowledge, we provide further insights into the role of profilins in fibre domestication and exemplify the potential for network analysis in polyploid species. © 2016 John Wiley & Sons Ltd.

  13. "Us and them": a social network analysis of physicians' professional networks and their attitudes towards EBM.

    Science.gov (United States)

    Mascia, Daniele; Cicchetti, Americo; Damiani, Gianfranco

    2013-10-22

    Extant research suggests that there is a strong social component to Evidence-Based Medicine (EBM) adoption since professional networks amongst physicians are strongly associated with their attitudes towards EBM. Despite this evidence, it is still unknown whether individual attitudes to use scientific evidence in clinical decision-making influence the position that physicians hold in their professional network. This paper explores how physicians' attitudes towards EBM is related to the network position they occupy within healthcare organizations. Data pertain to a sample of Italian physicians, whose professional network relationships, demographics and work-profile characteristics were collected. A social network analysis was performed to capture the structural importance of physicians in the collaboration network by the means of a core-periphery analysis and the computation of network centrality indicators. Then, regression analysis was used to test the association between the network position of individual clinicians and their attitudes towards EBM. Findings documented that the overall network structure is made up of a dense cohesive core of physicians and of less connected clinicians who occupy the periphery. A negative association between the physicians' attitudes towards EBM and the coreness they exhibited in the professional network was also found. Network centrality indicators confirmed these results documenting a negative association between physicians' propensity to use EBM and their structural importance in the professional network. Attitudes that physicians show towards EBM are related to the part (core or periphery) of the professional networks to which they belong as well as to their structural importance. By identifying virtuous attitudes and behaviors of professionals within their organizations, policymakers and executives may avoid marginalization and stimulate integration and continuity of care, both within and across the boundaries of healthcare

  14. Robust Granger Analysis in Lp Norm Space for Directed EEG Network Analysis.

    Science.gov (United States)

    Li, Peiyang; Huang, Xiaoye; Li, Fali; Wang, Xurui; Zhou, Weiwei; Liu, Huan; Ma, Teng; Zhang, Tao; Guo, Daqing; Yao, Dezhong; Xu, Peng

    2017-11-01

    Granger analysis (GA) is widely used to construct directed brain networks based on various physiological recordings, such as functional magnetic resonance imaging, and electroencephalogram (EEG). However, in real applications, EEGs are inevitably contaminated by unexpected artifacts that may distort the networks because of the L2 norm structure utilized in GAs when estimating directed links. Compared with the L2 norm, the Lp ( ) norm can compress outlier effects. In this paper, an extended GA is constructed by applying the Lp ( ) norm strategy to estimate robust causalities under outlier conditions, and a feasible iteration procedure is utilized to solve the new GA model. A quantitative evaluation using a predefined simulation network demonstrates smaller bias errors and higher linkage consistence for the Lp ( , 0.8, 0.6, 0.4, 0.2) -GAs compared with both the Lasso- and L2-GAs under various simulated outlier conditions. Applications in resting-state EEGs that contain ocular artifacts also show that the proposed GA can effectively compress the ocular outlier influence and recover the reliable networks. The proposed Lp-GA may be helpful in capturing the reliable network structure when EEGs are contaminated with artifacts in related studies.

  15. Differential network analysis from cross-platform gene expression data.

    Science.gov (United States)

    Zhang, Xiao-Fei; Ou-Yang, Le; Zhao, Xing-Ming; Yan, Hong

    2016-09-28

    Understanding how the structure of gene dependency network changes between two patient-specific groups is an important task for genomic research. Although many computational approaches have been proposed to undertake this task, most of them estimate correlation networks from group-specific gene expression data independently without considering the common structure shared between different groups. In addition, with the development of high-throughput technologies, we can collect gene expression profiles of same patients from multiple platforms. Therefore, inferring differential networks by considering cross-platform gene expression profiles will improve the reliability of network inference. We introduce a two dimensional joint graphical lasso (TDJGL) model to simultaneously estimate group-specific gene dependency networks from gene expression profiles collected from different platforms and infer differential networks. TDJGL can borrow strength across different patient groups and data platforms to improve the accuracy of estimated networks. Simulation studies demonstrate that TDJGL provides more accurate estimates of gene networks and differential networks than previous competing approaches. We apply TDJGL to the PI3K/AKT/mTOR pathway in ovarian tumors to build differential networks associated with platinum resistance. The hub genes of our inferred differential networks are significantly enriched with known platinum resistance-related genes and include potential platinum resistance-related genes.

  16. Burst analysis tool for developing neuronal networks exhibiting highly varying action potential dynamics

    Directory of Open Access Journals (Sweden)

    Fikret Emre eKapucu

    2012-06-01

    Full Text Available In this paper we propose a firing statistics based neuronal network burst detection algorithm for neuronal networks exhibiting highly variable action potential dynamics. Electrical activity of neuronal networks is generally analyzed by the occurrences of spikes and bursts both in time and space. Commonly accepted analysis tools employ burst detection algorithms based on predefined criteria. However, maturing neuronal networks, such as those originating from human embryonic stem cells (hESC, exhibit highly variable network structure and time-varying dynamics. To explore the developing burst/spike activities of such networks, we propose a burst detection algorithm which utilizes the firing statistics based on interspike interval (ISI histograms. Moreover, the algorithm calculates interspike interval thresholds for burst spikes as well as for pre-burst spikes and burst tails by evaluating the cumulative moving average and skewness of the ISI histogram. Because of the adaptive nature of the proposed algorithm, its analysis power is not limited by the type of neuronal cell network at hand. We demonstrate the functionality of our algorithm with two different types of microelectrode array (MEA data recorded from spontaneously active hESC-derived neuronal cell networks. The same data was also analyzed by two commonly employed burst detection algorithms and the differences in burst detection results are illustrated. The results demonstrate that our method is both adaptive to the firing statistics of the network and yields successful burst detection from the data. In conclusion, the proposed method is a potential tool for analyzing of hESC-derived neuronal cell networks and thus can be utilized in studies aiming to understand the development and functioning of human neuronal networks and as an analysis tool for in vitro drug screening and neurotoxicity assays.

  17. Burst analysis tool for developing neuronal networks exhibiting highly varying action potential dynamics.

    Science.gov (United States)

    Kapucu, Fikret E; Tanskanen, Jarno M A; Mikkonen, Jarno E; Ylä-Outinen, Laura; Narkilahti, Susanna; Hyttinen, Jari A K

    2012-01-01

    In this paper we propose a firing statistics based neuronal network burst detection algorithm for neuronal networks exhibiting highly variable action potential dynamics. Electrical activity of neuronal networks is generally analyzed by the occurrences of spikes and bursts both in time and space. Commonly accepted analysis tools employ burst detection algorithms based on predefined criteria. However, maturing neuronal networks, such as those originating from human embryonic stem cells (hESCs), exhibit highly variable network structure and time-varying dynamics. To explore the developing burst/spike activities of such networks, we propose a burst detection algorithm which utilizes the firing statistics based on interspike interval (ISI) histograms. Moreover, the algorithm calculates ISI thresholds for burst spikes as well as for pre-burst spikes and burst tails by evaluating the cumulative moving average (CMA) and skewness of the ISI histogram. Because of the adaptive nature of the proposed algorithm, its analysis power is not limited by the type of neuronal cell network at hand. We demonstrate the functionality of our algorithm with two different types of microelectrode array (MEA) data recorded from spontaneously active hESC-derived neuronal cell networks. The same data was also analyzed by two commonly employed burst detection algorithms and the differences in burst detection results are illustrated. The results demonstrate that our method is both adaptive to the firing statistics of the network and yields successful burst detection from the data. In conclusion, the proposed method is a potential tool for analyzing of hESC-derived neuronal cell networks and thus can be utilized in studies aiming to understand the development and functioning of human neuronal networks and as an analysis tool for in vitro drug screening and neurotoxicity assays.

  18. Global gene expression profiling in infants with acute respiratory syncytial virus broncholitis demonstrates systemic activation of interferon signaling networks.

    Science.gov (United States)

    Bucasas, Kristine L; Mian, Asad I; Demmler-Harrison, Gail J; Caviness, Alison C; Piedra, Pedro A; Franco, Luis M; Shaw, Chad A; Zhai, Yijie; Wang, Xueqing; Bray, Molly S; Couch, Robert B; Belmont, John W

    2013-02-01

    Respiratory syncytial virus (RSV) is a leading cause of pediatric lower respiratory tract infections and has a high impact on pediatric emergency department utilization. Variation in host response may influence the pathogenesis and disease severity. We evaluated global gene expression profiles to better understand the systemic host response to acute RSV bronchiolitis in infants and young children. Patients (age ≤ 24 months) who were clinically diagnosed with acute bronchiolitis and who had a positive rapid test for RSV assay were recruited from the Texas Children's Hospital emergency department. Global gene expression of peripheral whole blood cells were analyzed in 21 cases and 37 age-matched healthy controls. Transcripts exhibiting significant upregulation and downregulation as a result of RSV infection were identified and confirmed in a subset of samples using RNA sequencing. The potential pathways affected were analyzed. Blood was obtained from patients with acute RSV bronchiolitis (mean age 6 months). Of these, 43% were admitted to the hospital, 52% were given intravenous fluids and 24% received oxygen. Highly significant expression differences were detected in a discovery cohort of White infants (N = 33) and validated in an independent group of African-American infants (N = 19). Individuals with mild disease (N = 15) could not be distinguished from subjects with clinically moderate disease (N = 5). Pathway enrichment analyses of the differentially expressed genes demonstrated extensive activation of the innate immune response, particularly the interferon signaling network. There was a significant downregulation of transcripts corresponding to antigen presentation.

  19. Experimental demonstration of fronthaul flexibility for enhanced CoMP service in 5G radio and optical access networks.

    Science.gov (United States)

    Zhang, Jiawei; Ji, Yuefeng; Yu, Hao; Huang, Xingang; Li, Han

    2017-09-04

    The RAN architecture towards mobile 5G and beyond is undergoing a fundamental evolution, which brings optics into the radio world. Fronthaul is a new segment that leverages on the advantages of optical communication for RAN transport. However, the current fronthaul architecture shows a fixed connection between an RRH and a BBU, which leads to inefficient resource utilization. In this paper, we focus on the fronthaul flexibility that allows "any-RRH to any-BBU" connection. In particular, we consider a CoMP service and discuss how flexible optical fronthaul helps to improve its performance. To achieve this goal, we propose an SDN-enabled orchestration for coordinating radio and optical access networks. Under this unified control manner, the agile RRH-BBU mapping can be reached through lightpath reconfiguration. To further verify the benefits of flexibility, we experiment the CoMP service in the cloud radio over flexible optical fronthaul (CRoFlex) testbed. Experimental results demonstrate the proposed SDN-enabled flexible optical fronthaul can improve the CoMP performance by optimizing the RRH-BBU mapping.

  20. Assessing a Sport/Cultural Events Network: An Application of Social Network Analysis

    OpenAIRE

    Ziakas, V; Costa, CA

    2009-01-01

    The purpose of this study was to assess the complexity of a sport/cultural events network. To that intent, a social network analysis was conducted in a small community in the US. The study had three main objectives: (1) Examine relationships among organisations involved in planning and implementing sport and cultural events based on their communication, exchange of resources, and assistance; (2) Identify the most important actors within the events network and their relationships; (3) Investig...

  1. Social Network Analysis of a Supply Network Structural Investigation of the South Korean Automotive Industry

    OpenAIRE

    Kim, Jin-Baek

    2015-01-01

    Part 3: Knowledge Based Production Management; International audience; In this paper, we analyzed the structure of the South Korean automotive industry using social network analysis (SNA) metrics. Based on the data collected from 275 companies, a social network model of the supply network was constructed. Centrality measures in the SNA field were used to interpret the result and identify key companies. The results show that SNA metrics can be useful to understand the structure of a supply net...

  2. Weighted Complex Network Analysis of Shanghai Rail Transit System

    Directory of Open Access Journals (Sweden)

    Yingying Xing

    2016-01-01

    Full Text Available With increasing passenger flows and construction scale, Shanghai rail transit system (RTS has entered a new era of networking operation. In addition, the structure and properties of the RTS network have great implications for urban traffic planning, design, and management. Thus, it is necessary to acquire their network properties and impacts. In this paper, the Shanghai RTS, as well as passenger flows, will be investigated by using complex network theory. Both the topological and dynamic properties of the RTS network are analyzed and the largest connected cluster is introduced to assess the reliability and robustness of the RTS network. Simulation results show that the distribution of nodes strength exhibits a power-law behavior and Shanghai RTS network shows a strong weighted rich-club effect. This study also indicates that the intentional attacks are more detrimental to the RTS network than to the random weighted network, but the random attacks can cause slightly more damage to the random weighted network than to the RTS network. Our results provide a richer view of complex weighted networks in real world and possibilities of risk analysis and policy decisions for the RTS operation department.

  3. The Spread of Evidence-Poor Medicine via Flawed Social-Network Analysis

    CERN Document Server

    Lyons, Russell

    2010-01-01

    We present cautionary examples of what can go wrong when assumptions behind statistical procedures are insufficiently examined, even when the analysis is performed by highly reputed and otherwise careful practitioners. Our examples come from a series of recent papers by Christakis and Fowler that claim to have demonstrated the existence of transmission via social networks of various personal characteristics, including obesity, smoking cessation, happiness, and loneliness. Those papers also assert that such influence extends to three degrees of separation in social networks.

  4. Using Musical Intervals to Demonstrate Superposition of Waves and Fourier Analysis

    Science.gov (United States)

    LoPresto, Michael C.

    2013-01-01

    What follows is a description of a demonstration of superposition of waves and Fourier analysis using a set of four tuning forks mounted on resonance boxes and oscilloscope software to create, capture and analyze the waveforms and Fourier spectra of musical intervals.

  5. Integrated corridor management initiative : demonstration phase evaluation, Dallas benefit-cost analysis test plan.

    Science.gov (United States)

    2012-08-01

    This report presents the test plan for conducting the Benefit-Cost Analysis (BCA) for the United States : Department of Transportation (U.S. DOT) evaluation of the Dallas U.S. 75 Integrated Corridor : Management (ICM) Initiative Demonstration. The IC...

  6. Competing definitions: a public policy analysis of the federal recreational fee demonstration program

    Science.gov (United States)

    Thomas A. E. More

    2003-01-01

    Problem definition theory specifies that however controls the definition of a problem is in a unique position to control debate over the issue, influence others, and determine the problem's place on the agenda. This paper uses a rhetorical analysis and a questionnaire survey of congressional aides to examine the federal Recreational Fee Demonstration Program....

  7. Brief Experimental Analysis of Written Letter Formation: Single-Case Demonstration

    Science.gov (United States)

    Burns, Matthew K.; Ganuza, Zoila M.; London, Rachel M.

    2009-01-01

    Many students experience difficulty in acquiring basic writing skills and educators need to efficiently address those deficits by implementing an intervention with a high likelihood for success. The current article demonstrates the utility of using a brief experimental analysis (BEA) to identify a letter-formation intervention for a second-grade…

  8. Using Social Network Analysis to Assess Mentorship and Collaboration in a Public Health Network.

    Science.gov (United States)

    Petrescu-Prahova, Miruna; Belza, Basia; Leith, Katherine; Allen, Peg; Coe, Norma B; Anderson, Lynda A

    2015-08-20

    Addressing chronic disease burden requires the creation of collaborative networks to promote systemic changes and engage stakeholders. Although many such networks exist, they are rarely assessed with tools that account for their complexity. This study examined the structure of mentorship and collaboration relationships among members of the Healthy Aging Research Network (HAN) using social network analysis (SNA). We invited 97 HAN members and partners to complete an online social network survey that included closed-ended questions about HAN-specific mentorship and collaboration during the previous 12 months. Collaboration was measured by examining the activity of the network on 6 types of products: published articles, in-progress manuscripts, grant applications, tools, research projects, and presentations. We computed network-level measures such as density, number of components, and centralization to assess the cohesiveness of the network. Sixty-three respondents completed the survey (response rate, 65%). Responses, which included information about collaboration with nonrespondents, suggested that 74% of HAN members were connected through mentorship ties and that all 97 members were connected through at least one form of collaboration. Mentorship and collaboration ties were present both within and across boundaries of HAN member organizations. SNA of public health collaborative networks provides understanding about the structure of relationships that are formed as a result of participation in network activities. This approach may offer members and funders a way to assess the impact of such networks that goes beyond simply measuring products and participation at the individual level.

  9. Trauma-Exposed Latina Immigrants' Networks: A Social Network Analysis Approach.

    Science.gov (United States)

    Hurtado-de-Mendoza, Alejandra; Serrano, Adriana; Gonzales, Felisa A; Fernandez, Nicole C; Cabling, Mark; Kaltman, Stacey

    2016-11-01

    Trauma exposure among Latina immigrants is common. Social support networks can buffer the impact of trauma on mental health. This study characterizes the social networks of trauma-exposed Latina immigrants using a social network analysis perspective. In 2011-2012 a convenience sample (n=28) of Latina immigrants with trauma exposure and presumptive depression or posttraumatic stress disorder was recruited from a community clinic in Washington DC. Participants completed a social network assessment and listed up to ten persons in their network (alters). E-Net was used to describe the aggregate structural, interactional, and functional characteristics of networks and Node-XL was used in a case study to diagram one network. Most participants listed children (93%), siblings (82%), and friends (71%) as alters, and most alters lived in the US (69%). Perceived emotional support and positive social interaction were higher compared to tangible, language, information, and financial support. A case study illustrates the use of network visualizations to assess the strengths and weaknesses of social networks. Targeted social network interventions to enhance supportive networks among trauma-exposed Latina immigrants are warranted.

  10. Uncoupled Analysis of Stochastic Reaction Networks in Fluctuating Environments

    Science.gov (United States)

    Zechner, Christoph; Koeppl, Heinz

    2014-01-01

    The dynamics of stochastic reaction networks within cells are inevitably modulated by factors considered extrinsic to the network such as, for instance, the fluctuations in ribosome copy numbers for a gene regulatory network. While several recent studies demonstrate the importance of accounting for such extrinsic components, the resulting models are typically hard to analyze. In this work we develop a general mathematical framework that allows to uncouple the network from its dynamic environment by incorporating only the environment's effect onto the network into a new model. More technically, we show how such fluctuating extrinsic components (e.g., chemical species) can be marginalized in order to obtain this decoupled model. We derive its corresponding process- and master equations and show how stochastic simulations can be performed. Using several case studies, we demonstrate the significance of the approach. PMID:25473849

  11. Network externalities in telecommunication industry: An analysis of Serbian market

    Directory of Open Access Journals (Sweden)

    Trifunović Dejan

    2016-01-01

    Full Text Available This paper deals with network competition and provides empirical analysis of market concentration, network and call externalities, access pricing, price discrimination and switching costs in Serbian mobile phone telecommunications market. It is shown that network externalities governed the expansion of this market until 2008. Upon entry of VIP incumbents didn't engage in predatory behaviour towards entrant aiming to benefit from locked- in users. The policy of mobile phone number portability reduced on-net prices and substantially increased consumer's surplus. In contrast to some previous research, this policy was pro-competitive in Serbia. We have also determined that users of the network with the largest market share benefit the most from call externalities. Finally, one network does not price discriminate between outgoing and incoming roaming calls, which implies that users of this network have higher level pecuniary externalities in roaming compared to users of price discriminating networks.

  12. A Social Network Analysis of Occupational Segregation

    DEFF Research Database (Denmark)

    Buhai, Ioan Sebastian; van der Leij, Marco

    We develop a social network model of occupational segregation between different social groups, generated by the existence of positive inbreeding bias among individuals from the same group. If network referrals are important for job search, then expected homophily in the contact network structure...... induces different career choices for individuals from different social groups. This further translates into stable occupational segregation equilibria in the labor market. We derive the conditions for wage and unemployment inequality in the segregation equilibria and characterize first and second best...... social welfare optima. Surprisingly, we find that socially optimal policies involve segregation....

  13. Objectives and Current Status of the IAEA Network of Centers of Excellence: Training in and Demonstration of Waste Disposal Technologies in Underground Research Laboratories

    Energy Technology Data Exchange (ETDEWEB)

    Bell, M. J.; Knapp, M. R.

    2003-02-27

    Underground Research Laboratories (URLs) to develop and demonstrate technologies for the safe geologic disposal of radioactive wastes have been established for national purposes by several Member States of the International Atomic Energy Agency (IAEA). Under the auspices of the IAEA, nationally developed URLs and associated research institutions are being offered for use by other nations. These facilities form a Network of Centers of Excellence for training in and development of waste disposal technologies. Experience gained in the operation of the facilities, and through associated experimentation and demonstrations, will be transferred to participating Member States through hands-on work at the facilities. The Network consists of Network Members and Network Participants who share co-operative activities. Network Members are owners of facilities who have offered them to be part of the Network. At this time there are eight Members consisting of six underground facilities, a laboratory, and a university. Network Participants can potentially come from any interested IAEA Member State having spent nuclear fuel for disposal, with or without an established program for geologic disposal. There are presently about 15 Network Participants. A significant Network activity beginning in 2003 will be a Coordinated Research Project (CRP) on characterization and evaluation of swelling clays for use in engineered barrier systems of geologic repositories. At the end of this project, every involved Member State should be able to identify and characterize a swelling clay that is suitable for use in a geologic repository. As the Network grows, additional CRPs to be carried out in the Underground Research Facilities of the Network Members will be defined.

  14. Revisiting Interpretation of Canonical Correlation Analysis: A Tutorial and Demonstration of Canonical Commonality Analysis

    Science.gov (United States)

    Nimon, Kim; Henson, Robin K.; Gates, Michael S.

    2010-01-01

    In the face of multicollinearity, researchers face challenges interpreting canonical correlation analysis (CCA) results. Although standardized function and structure coefficients provide insight into the canonical variates produced, they fall short when researchers want to fully report canonical effects. This article revisits the interpretation of…

  15. 4 Analysis of Network on Twitter under the Disaster Situation

    OpenAIRE

    石原, 裕規; 諏訪, 博彦; 鳥海, 不二夫; 太田, 敏澄; Hiroki, ISHIHARA; Hirohiko, SUWA; Fujio, TORIUMI; Toshizumi, OHTA; 東京大学大学院工学系研究科システム創成学専攻; 電気通信大学大学院情報システム学研究科; Department of Systems Innovation School of Engineering, The University of Tokyo; Graduate School of Information Systems, The University of Electro-Communications

    2012-01-01

    Using tweets extracted from Twitter during the Great Eastern Japan Earthquake 2011, social network analysis techniques were used to generate and analyse the online networks that emerged at that time. People attempted to collect information about earthquakes and to communicate with friends throught the twitter, and it is coping with the earthquake disaster. The aim was to identify active players for the Great Eastern Earthquake on twitter. We construct a communication network and calculate two...

  16. Neural networks analysis on SSME vibration simulation data

    Science.gov (United States)

    Lo, Ching F.; Wu, Kewei

    1993-01-01

    The neural networks method is applied to investigate the feasibility in detecting anomalies in turbopump vibration of SSME to supplement the statistical method utilized in the prototype system. The investigation of neural networks analysis is conducted using SSME vibration data from a NASA developed numerical simulator. The limited application of neural networks to the HPFTP has also shown the effectiveness in diagnosing the anomalies of turbopump vibrations.

  17. Quantitative analysis of access strategies to remoteinformation in network services

    DEFF Research Database (Denmark)

    Olsen, Rasmus Løvenstein; Schwefel, Hans-Peter; Hansen, Martin Bøgsted

    2006-01-01

    Remote access to dynamically changing information elements is a required functionality for various network services, including routing and instances of context-sensitive networking. Three fundamentally different strategies for such access are investigated in this paper: (1) a reactive approach in......, network delay characterization) and specific requirements on mismatch probability, traffic overhead, and access delay. Finally, the analysis is applied to the use-case of context-sensitive service discovery....

  18. Aggregation algorithm towards large-scale Boolean network analysis

    OpenAIRE

    Zhao, Y.; Kim, J.; Filippone, M.

    2013-01-01

    The analysis of large-scale Boolean network dynamics is of great importance in understanding complex phenomena where systems are characterized by a large number of components. The computational cost to reveal the number of attractors and the period of each attractor increases exponentially as the number of nodes in the networks increases. This paper presents an efficient algorithm to find attractors for medium to large-scale networks. This is achieved by analyzing subnetworks within the netwo...

  19. Network analysis and Canada's large value transfer system

    OpenAIRE

    Embree, Lana; Roberts, Tom

    2009-01-01

    Analysis of the characteristics and structure of a network of financial institutions can provide insight into the complex relationships and interdependencies that exist in a payment, clearing, and settlement system (PCSS), and allow an intuitive understanding of the PCSS's efficiency, stability, and resiliency. The authors review the literature related to the PCSS network and describe the daily and intraday network structure of payment activity in the Large Value Transfer System (LVTS), which...

  20. Statistical and machine learning approaches for network analysis

    CERN Document Server

    Dehmer, Matthias

    2012-01-01

    Explore the multidisciplinary nature of complex networks through machine learning techniques Statistical and Machine Learning Approaches for Network Analysis provides an accessible framework for structurally analyzing graphs by bringing together known and novel approaches on graph classes and graph measures for classification. By providing different approaches based on experimental data, the book uniquely sets itself apart from the current literature by exploring the application of machine learning techniques to various types of complex networks. Comprised of chapters written by internation

  1. PAN network analysis program: its development and use

    Energy Technology Data Exchange (ETDEWEB)

    Goldwater, M.H.; Rogers, K.; Turnbull, D.K.

    1976-01-01

    British Gas Corp.'s London Research Station describes a comprehensive, efficient, and flexible computer simulation of pressure and flows in gas networks known as PAN - Program to Analyze Networks. The program is used extensively throughout the BGC system for both design and control of gas transmission grids. Its powerful method of analysis solves network problems quickly and handles complex configurations of compressors and regulators easily.

  2. Contextualized Network Analysis: Theory and Methods for Networks with Node Covariates

    Science.gov (United States)

    Binkiewicz, Norbert M.

    Biological and social systems consist of myriad interacting units. The interactions can be intuitively represented in the form of a graph or network. Measurements of these graphs can reveal the underlying structure of these interactions, which provides insight into the systems that generated the graphs. Moreover, in applications such as neuroconnectomics, social networks, and genomics, graph data is accompanied by contextualizing measures on each node. We leverage these node covariates to help uncover latent communities, using a modification of spectral clustering. Statistical guarantees are provided under a joint mixture model called the node contextualized stochastic blockmodel, including a bound on the mis-clustering rate. For most simulated conditions, covariate assisted spectral clustering yields superior results relative to both regularized spectral clustering without node covariates and an adaptation of canonical correlation analysis. We apply covariate assisted spectral clustering to large brain graphs derived from diffusion MRI, using the node locations or neurological regions as covariates. In both cases, covariate assisted spectral clustering yields clusters that are easier to interpret neurologically. A low rank update algorithm is developed to reduce the computational cost of determining the tuning parameter for covariate assisted spectral clustering. As simulations demonstrate, the low rank update algorithm increases the speed of covariate assisted spectral clustering up to ten-fold, while practically matching the clustering performance of the standard algorithm. Graphs with node attributes are sometimes accompanied by ground truth labels that align closely with the latent communities in the graph. We consider the example of a mouse retina neuron network accompanied by the neuron spatial location and neuronal cell types. In this example, the neuronal cell type is considered a ground truth label. Current approaches for defining neuronal cell type vary

  3. Transcription regulatory networks analysis using CAGE

    KAUST Repository

    Tegnér, Jesper N.

    2009-10-01

    Mapping out cellular networks in general and transcriptional networks in particular has proved to be a bottle-neck hampering our understanding of biological processes. Integrative approaches fusing computational and experimental technologies for decoding transcriptional networks at a high level of resolution is therefore of uttermost importance. Yet, this is challenging since the control of gene expression in eukaryotes is a complex multi-level process influenced by several epigenetic factors and the fine interplay between regulatory proteins and the promoter structure governing the combinatorial regulation of gene expression. In this chapter we review how the CAGE data can be integrated with other measurements such as expression, physical interactions and computational prediction of regulatory motifs, which together can provide a genome-wide picture of eukaryotic transcriptional regulatory networks at a new level of resolution. © 2010 by Pan Stanford Publishing Pte. Ltd. All rights reserved.

  4. Social network analysis of sustainable transportation organizations.

    Science.gov (United States)

    2012-07-15

    Studying how organizations communicate with each other can provide important insights into the influence, and policy success of different types of organizations. This study examines the communication networks of 121 organizations promoting sustainabl...

  5. Large-scale Heterogeneous Network Data Analysis

    Science.gov (United States)

    2012-07-31

    Information Diffusion over Crowds with Social Network.” ACM SIGGRAPH 2012. (poster)  Wan-Yu Lin, Nanyun Peng, Chun-Chao Yen, Shou-De Lin. “Online Plagiarism ...Abstract: Large-scale network is a powerful data structure allowing the depiction of relationship information between entities. Recent...we propose an unsupervised tensor-based mechanism, considering higher-order relational information , to model the complex semantics of nodes. The

  6. Stochastic modeling and analysis of telecoms networks

    CERN Document Server

    Decreusefond, Laurent

    2012-01-01

    This book addresses the stochastic modeling of telecommunication networks, introducing the main mathematical tools for that purpose, such as Markov processes, real and spatial point processes and stochastic recursions, and presenting a wide list of results on stability, performances and comparison of systems.The authors propose a comprehensive mathematical construction of the foundations of stochastic network theory: Markov chains, continuous time Markov chains are extensively studied using an original martingale-based approach. A complete presentation of stochastic recursions from an

  7. Network analysis of Chinese provincial economies

    Science.gov (United States)

    Sun, Xiaoqi; An, Haizhong; Liu, Xiaojia

    2018-02-01

    Global economic system is a huge network formed by national subnetworks that contains the provincial networks. As the second largest world economy, China has "too big to fail" impact on the interconnected global economy. Detecting the critical sectors and vital linkages inside Chinese economic network is meaningful for understanding the origin of this Chinese impact. Different from tradition network research at national level, this paper focuses on the provincial networks and inter-provincial network. Using Chinese inter-regional input-output table to construct 30 provincial input-output networks and one inter-provincial input-output network, we identify central sectors and vital linkages, as well as analyze economic structure similarity. Results show that (1) Communication Devices sector in Guangdong and that in Jiangsu, Transportation and Storage sector in Shanghai play critical roles in Chinese economy. (2) Advanced manufactures and services industry occupy the central positions in eastern provincial economies, while Construction sector, Heavy industry, and Wholesale and Retail Trades sector are influential in middle and western provinces. (3) The critical monetary flow paths in Chinese economy are Communication Devices sector to Communication Devices sector in Guangdong, Metals Mining sector to Iron and Steel Smelting sector in Henan, Communication Devices sector to Communication Devices sector in Jiangsu, as well as Petroleum Mining sector in Heilongjiang to Petroleum Processing sector in Liaoning. (4) Collective influence results suggest that Finance sector, Transportation and Storage sector, Production of Electricity and Heat sector, and Rubber and Plastics sector in Hainan are strategic influencers, despite being weakly connected. These sectors and input-output relations are worthy of close attention for monitoring Chinese economy.

  8. Towards the integration of social network analysis in an inter-organizational networks perspective

    DEFF Research Database (Denmark)

    Bergenholtz, Carsten; Waldstrøm, Christian

    This conceptual paper deals with the issue of studying inter-organizational networks while applying social network analysis (SNA). SNA is a widely recognized technique in network research, particularly within intra-organizational settings, while there seems to be a significant gap in the inter......-organizational setting. Based on a literature review of both SNA as a methodology and/or theory and the field of inter-organizational networks, the aim is to gain an overview in order to provide a clear setting for SNA in inter-organizational research....

  9. Gene network analysis: from heart development to cardiac therapy.

    Science.gov (United States)

    Ferrazzi, Fulvia; Bellazzi, Riccardo; Engel, Felix B

    2015-03-01

    Networks offer a flexible framework to represent and analyse the complex interactions between components of cellular systems. In particular gene networks inferred from expression data can support the identification of novel hypotheses on regulatory processes. In this review we focus on the use of gene network analysis in the study of heart development. Understanding heart development will promote the elucidation of the aetiology of congenital heart disease and thus possibly improve diagnostics. Moreover, it will help to establish cardiac therapies. For example, understanding cardiac differentiation during development will help to guide stem cell differentiation required for cardiac tissue engineering or to enhance endogenous repair mechanisms. We introduce different methodological frameworks to infer networks from expression data such as Boolean and Bayesian networks. Then we present currently available temporal expression data in heart development and discuss the use of network-based approaches in published studies. Collectively, our literature-based analysis indicates that gene network analysis constitutes a promising opportunity to infer therapy-relevant regulatory processes in heart development. However, the use of network-based approaches has so far been limited by the small amount of samples in available datasets. Thus, we propose to acquire high-resolution temporal expression data to improve the mathematical descriptions of regulatory processes obtained with gene network inference methodologies. Especially probabilistic methods that accommodate the intrinsic variability of biological systems have the potential to contribute to a deeper understanding of heart development.

  10. Mental health network governance: comparative analysis across Canadian regions

    Science.gov (United States)

    Wiktorowicz, Mary E; Fleury, Marie-Josée; Adair, Carol E; Lesage, Alain; Goldner, Elliot; Peters, Suzanne

    2010-01-01

    Objective Modes of governance were compared in ten local mental health networks in diverse contexts (rural/urban and regionalized/non-regionalized) to clarify the governance processes that foster inter-organizational collaboration and the conditions that support them. Methods Case studies of ten local mental health networks were developed using qualitative methods of document review, semi-structured interviews and focus groups that incorporated provincial policy, network and organizational levels of analysis. Results Mental health networks adopted either a corporate structure, mutual adjustment or an alliance governance model. A corporate structure supported by regionalization offered the most direct means for local governance to attain inter-organizational collaboration. The likelihood that networks with an alliance model developed coordination processes depended on the presence of the following conditions: a moderate number of organizations, goal consensus and trust among the organizations, and network-level competencies. In the small and mid-sized urban networks where these conditions were met their alliance realized the inter-organizational collaboration sought. In the large urban and rural networks where these conditions were not met, externally brokered forms of network governance were required to support alliance based models. Discussion In metropolitan and rural networks with such shared forms of network governance as an alliance or voluntary mutual adjustment, external mediation by a regional or provincial authority was an important lever to foster inter-organizational collaboration. PMID:21289999

  11. Experimental demonstration of bandwidth on demand (BoD) provisioning based on time scheduling in software-defined multi-domain optical networks

    Science.gov (United States)

    Zhao, Yongli; Li, Yajie; Wang, Xinbo; Chen, Bowen; Zhang, Jie

    2016-09-01

    A hierarchical software-defined networking (SDN) control architecture is designed for multi-domain optical networks with the Open Daylight (ODL) controller. The OpenFlow-based Control Virtual Network Interface (CVNI) protocol is deployed between the network orchestrator and the domain controllers. Then, a dynamic bandwidth on demand (BoD) provisioning solution is proposed based on time scheduling in software-defined multi-domain optical networks (SD-MDON). Shared Risk Link Groups (SRLG)-disjoint routing schemes are adopted to separate each tenant for reliability. The SD-MDON testbed is built based on the proposed hierarchical control architecture. Then the proposed time scheduling-based BoD (Ts-BoD) solution is experimentally demonstrated on the testbed. The performance of the Ts-BoD solution is evaluated with respect to blocking probability, resource utilization, and lightpath setup latency.

  12. An Analysis of the Structure and Evolution of Networks

    Science.gov (United States)

    Hua, Guangying

    2011-01-01

    As network research receives more and more attention from both academic researchers and practitioners, network analysis has become a fast growing field attracting many researchers from diverse fields such as physics, computer science, and sociology. This dissertation provides a review of theory and research on different real data sets from the…

  13. Analysis of wave directional spreading using neural networks

    Digital Repository Service at National Institute of Oceanography (India)

    Deo, M.C.; Gondane, D.S.; SanilKumar, V.

    !. ‘‘Analysis of directional wave energy using neu- ral networks.’’ MS thesis, Indian Institute of Technology, Bombay, India. Kosko, B. ~1992!. Neural networks and fuzzy systems, Prentice Hall, Englewood Cliffs, N.J. Kuik, A. J., Vledder, G., and Holthuijsen, L...

  14. Network analysis reveals multiscale controls on streamwater chemistry

    Science.gov (United States)

    Kevin J. McGuire; Christian E. Torgersen; Gene E. Likens; Donald C. Buso; Winsor H. Lowe; Scott W. Bailey

    2014-01-01

    By coupling synoptic data from a basin-wide assessment of streamwater chemistry with network-based geostatistical analysis, we show that spatial processes differentially affect biogeochemical condition and pattern across a headwater stream network. We analyzed a high-resolution dataset consisting of 664 water samples collected every 100 m throughout 32 tributaries in...

  15. Water Pipeline Network Analysis Using Simultaneous Loop Flow ...

    African Journals Online (AJOL)

    2013-03-01

    Mar 1, 2013 ... solving for the unknown in water network analysis. It is based on a loop iterative computation. Newton-Raphson method is a better technique for solving the network problems; however, the method adopted here computes simultaneous flow corrections for all loops, hence, the best since the computational.

  16. Transport network extensions for accessibility analysis in geographic information systems

    NARCIS (Netherlands)

    Jong, Tom de; Tillema, T.

    2005-01-01

    In many developed countries high quality digital transport networks are available for GIS based analysis. Partly this is due to the requirements of route planning software for internet and car navigation systems. Properties of these networks consist among others of road quality attributes,

  17. Transient stability analysis of a distribution network with distributed generators

    NARCIS (Netherlands)

    Xyngi, I.; Ishchenko, A.; Popov, M.; Van der Sluis, L.

    2009-01-01

    This letter describes the transient stability analysis of a 10-kV distribution network with wind generators, microturbines, and CHP plants. The network being modeled in Matlab/Simulink takes into account detailed dynamic models of the generators. Fault simulations at various locations are

  18. A Graph Oriented Approach for Network Forensic Analysis

    Science.gov (United States)

    Wang, Wei

    2010-01-01

    Network forensic analysis is a process that analyzes intrusion evidence captured from networked environment to identify suspicious entities and stepwise actions in an attack scenario. Unfortunately, the overwhelming amount and low quality of output from security sensors make it difficult for analysts to obtain a succinct high-level view of complex…

  19. Content analysis of Hydrometeorological Network in the Lower ...

    African Journals Online (AJOL)

    jen

    Osogbo, Nigeria. E-mail (ologunorisatemi@yahoo.com). ABSTRACT: This study deals with content analysis of hydrometerological networks in the Lower Benue. River Basin, Nigeria. This is with the overall aim of determining the effectiveness of the network in terms of providing useful data for agricultural planning. The study ...

  20. Analysis and control of flows in pressurized hydraulic networks

    NARCIS (Netherlands)

    Gupta, R.K.

    2006-01-01

    Analysis, design and flow control problems in pressurized hydraulic networks such as water transmission and distribution systems consisting of pipes and other appurtenant components such as reservoirs, pumps, valves and surge devices are dealt with from the prospective of network synthesis aiming at

  1. Static analysis of topology-dependent broadcast networks

    DEFF Research Database (Denmark)

    Nanz, Sebastian; Nielson, Flemming; Nielson, Hanne Riis

    2010-01-01

    changing network topology is a crucial ingredient. In this paper, we develop a static analysis that automatically constructs an abstract transition system, labelled by actions and connectivity information, to yield a mobility-preserving finite abstraction of the behaviour of a network expressed...

  2. Content analysis of Hydrometeorological Network in the Lower ...

    African Journals Online (AJOL)

    This study deals with content analysis of hydrometerological networks in the Lower Benue River Basin, Nigeria. This is with the overall aim of determining the effectiveness of the network in terms of providing useful data for agricultural planning. The study examines the type of stations in the river basin, the type of equipment ...

  3. PROJECT ACTIVITY ANALYSIS WITHOUT THE NETWORK MODEL

    Directory of Open Access Journals (Sweden)

    S. Munapo

    2012-01-01

    Full Text Available

    ENGLISH ABSTRACT: This paper presents a new procedure for analysing and managing activity sequences in projects. The new procedure determines critical activities, critical path, start times, free floats, crash limits, and other useful information without the use of the network model. Even though network models have been successfully used in project management so far, there are weaknesses associated with the use. A network is not easy to generate, and dummies that are usually associated with it make the network diagram complex – and dummy activities have no meaning in the original project management problem. The network model for projects can be avoided while still obtaining all the useful information that is required for project management. What are required are the activities, their accurate durations, and their predecessors.

    AFRIKAANSE OPSOMMING: Die navorsing beskryf ’n nuwerwetse metode vir die ontleding en bestuur van die sekwensiële aktiwiteite van projekte. Die voorgestelde metode bepaal kritiese aktiwiteite, die kritieke pad, aanvangstye, speling, verhasing, en ander groothede sonder die gebruik van ’n netwerkmodel. Die metode funksioneer bevredigend in die praktyk, en omseil die administratiewe rompslomp van die tradisionele netwerkmodelle.

  4. SBEToolbox: A Matlab Toolbox for Biological Network Analysis.

    Science.gov (United States)

    Konganti, Kranti; Wang, Gang; Yang, Ence; Cai, James J

    2013-01-01

    We present SBEToolbox (Systems Biology and Evolution Toolbox), an open-source Matlab toolbox for biological network analysis. It takes a network file as input, calculates a variety of centralities and topological metrics, clusters nodes into modules, and displays the network using different graph layout algorithms. Straightforward implementation and the inclusion of high-level functions allow the functionality to be easily extended or tailored through developing custom plugins. SBEGUI, a menu-driven graphical user interface (GUI) of SBEToolbox, enables easy access to various network and graph algorithms for programmers and non-programmers alike. All source code and sample data are freely available at https://github.com/biocoder/SBEToolbox/releases.

  5. Kiwi: a tool for integration and visualization of network topology and gene-set analysis.

    Science.gov (United States)

    Väremo, Leif; Gatto, Francesco; Nielsen, Jens

    2014-12-11

    The analysis of high-throughput data in biology is aided by integrative approaches such as gene-set analysis. Gene-sets can represent well-defined biological entities (e.g. metabolites) that interact in networks (e.g. metabolic networks), to exert their function within the cell. Data interpretation can benefit from incorporating the underlying network, but there are currently no optimal methods that link gene-set analysis and network structures. Here we present Kiwi, a new tool that processes output data from gene-set analysis and integrates them with a network structure such that the inherent connectivity between gene-sets, i.e. not simply the gene overlap, becomes apparent. In two case studies, we demonstrate that standard gene-set analysis points at metabolites regulated in the interrogated condition. Nevertheless, only the integration of the interactions between these metabolites provides an extra layer of information that highlights how they are tightly connected in the metabolic network. Kiwi is a tool that enhances interpretability of high-throughput data. It allows the users not only to discover a list of significant entities or processes as in gene-set analysis, but also to visualize whether these entities or processes are isolated or connected by means of their biological interaction. Kiwi is available as a Python package at http://www.sysbio.se/kiwi and an online tool in the BioMet Toolbox at http://www.biomet-toolbox.org.

  6. Category theoretic analysis of hierarchical protein materials and social networks.

    Directory of Open Access Journals (Sweden)

    David I Spivak

    Full Text Available Materials in biology span all the scales from Angstroms to meters and typically consist of complex hierarchical assemblies of simple building blocks. Here we describe an application of category theory to describe structural and resulting functional properties of biological protein materials by developing so-called ologs. An olog is like a "concept web" or "semantic network" except that it follows a rigorous mathematical formulation based on category theory. This key difference ensures that an olog is unambiguous, highly adaptable to evolution and change, and suitable for sharing concepts with other olog. We consider simple cases of beta-helical and amyloid-like protein filaments subjected to axial extension and develop an olog representation of their structural and resulting mechanical properties. We also construct a representation of a social network in which people send text-messages to their nearest neighbors and act as a team to perform a task. We show that the olog for the protein and the olog for the social network feature identical category-theoretic representations, and we proceed to precisely explicate the analogy or isomorphism between them. The examples presented here demonstrate that the intrinsic nature of a complex system, which in particular includes a precise relationship between structure and function at different hierarchical levels, can be effectively represented by an olog. This, in turn, allows for comparative studies between disparate materials or fields of application, and results in novel approaches to derive functionality in the design of de novo hierarchical systems. We discuss opportunities and challenges associated with the description of complex biological materials by using ologs as a powerful tool for analysis and design in the context of materiomics, and we present the potential impact of this approach for engineering, life sciences, and medicine.

  7. Experimental Demonstration and Theoretical Analysis of Slow Light in a Semiconductor Waveguide at GHz Frequencies

    DEFF Research Database (Denmark)

    Mørk, Jesper; Kjær, Rasmus; Poel, Mike van der

    2005-01-01

    Experimental demonstration and theoretical analysis of slow light in a semiconductor waveguide at GHz frequencies slow-down of light by a factor of two in a semiconductor waveguide at room temperature with a bandwidth of 16.7 GHz using the effect of coherent pulsations of the carrier density. The......-explained by a model accounting for the absorption saturation in the waveguide, when using a lifetime that depends on the reverse bias....

  8. Privacy Analysis in Mobile Social Networks

    DEFF Research Database (Denmark)

    Sapuppo, Antonio

    2012-01-01

    Nowadays, mobile social networks are capable of promoting social networking benefits during physical meetings, in order to leverage interpersonal affinities not only among acquaintances, but also between strangers. Due to their foundation on automated sharing of personal data in the physical...... surroundings of the user, these networks are subject to crucial privacy threats. Privacy management systems must be capable of accurate selection of data disclosure according to human data sensitivity evaluation. Therefore, it is crucial to research and comprehend an individual's personal information...... disclosure decisions happening in ordinary human communication. Consequently, in this paper we provide insight into influential factors of human data disclosure decisions, by presenting and analysing results of an empirical investigation comprising two online surveys. We focus on the following influential...

  9. An Approach to Data Analysis in 5G Networks

    Directory of Open Access Journals (Sweden)

    Lorena Isabel Barona López

    2017-02-01

    Full Text Available 5G networks expect to provide significant advances in network management compared to traditional mobile infrastructures by leveraging intelligence capabilities such as data analysis, prediction, pattern recognition and artificial intelligence. The key idea behind these actions is to facilitate the decision-making process in order to solve or mitigate common network problems in a dynamic and proactive way. In this context, this paper presents the design of Self-Organized Network Management in Virtualized and Software Defined Networks (SELFNET Analyzer Module, which main objective is to identify suspicious or unexpected situations based on metrics provided by different network components and sensors. The SELFNET Analyzer Module provides a modular architecture driven by use cases where analytic functions can be easily extended. This paper also proposes the data specification to define the data inputs to be taking into account in diagnosis process. This data specification has been implemented with different use cases within SELFNET Project, proving its effectiveness.

  10. Throughput Analysis of Large Wireless Networks with Regular Topologies

    Directory of Open Access Journals (Sweden)

    Kezhu Hong

    2007-04-01

    Full Text Available The throughput of large wireless networks with regular topologies is analyzed under two medium-access control schemes: synchronous array method (SAM and slotted ALOHA. The regular topologies considered are square, hexagon, and triangle. Both nonfading channels and Rayleigh fading channels are examined. Furthermore, both omnidirectional antennas and directional antennas are considered. Our analysis shows that the SAM leads to a much higher network throughput than the slotted ALOHA. The network throughput in this paper is measured in either bits-hops per second per Hertz per node or bits-meters per second per Hertz per node. The exact connection between the two measures is shown for each topology. With these two fundamental units, the network throughput shown in this paper can serve as a reliable benchmark for future works on network throughput of large networks.

  11. Throughput Analysis of Large Wireless Networks with Regular Topologies

    Directory of Open Access Journals (Sweden)

    Hong Kezhu

    2007-01-01

    Full Text Available The throughput of large wireless networks with regular topologies is analyzed under two medium-access control schemes: synchronous array method (SAM and slotted ALOHA. The regular topologies considered are square, hexagon, and triangle. Both nonfading channels and Rayleigh fading channels are examined. Furthermore, both omnidirectional antennas and directional antennas are considered. Our analysis shows that the SAM leads to a much higher network throughput than the slotted ALOHA. The network throughput in this paper is measured in either bits-hops per second per Hertz per node or bits-meters per second per Hertz per node. The exact connection between the two measures is shown for each topology. With these two fundamental units, the network throughput shown in this paper can serve as a reliable benchmark for future works on network throughput of large networks.

  12. Social network analysis of public health programs to measure partnership.

    Science.gov (United States)

    Schoen, Martin W; Moreland-Russell, Sarah; Prewitt, Kim; Carothers, Bobbi J

    2014-12-01

    In order to prevent chronic diseases, community-based programs are encouraged to take an ecological approach to public health promotion and involve many diverse partners. Little is known about measuring partnership in implementing public health strategies. We collected data from 23 Missouri communities in early 2012 that received funding from three separate programs to prevent obesity and/or reduce tobacco use. While all of these funding programs encourage partnership, only the Social Innovation for Missouri (SIM) program included a focus on building community capacity and enhancing collaboration. Social network analysis techniques were used to understand contact and collaboration networks in community organizations. Measurements of average degree, density, degree centralization, and betweenness centralization were calculated for each network. Because of the various sizes of the networks, we conducted comparative analyses with and without adjustment for network size. SIM programs had increased measurements of average degree for partner collaboration and larger networks. When controlling for network size, SIM groups had higher measures of network density and lower measures of degree centralization and betweenness centralization. SIM collaboration networks were more dense and less centralized, indicating increased partnership. The methods described in this paper can be used to compare partnership in community networks of various sizes. Further research is necessary to define causal mechanisms of partnership development and their relationship to public health outcomes. Copyright © 2014 Elsevier Ltd. All rights reserved.

  13. Satellite communications network design and analysis

    CERN Document Server

    Jo, Kenneth Y

    2011-01-01

    This authoritative book provides a thorough understanding of the fundamental concepts of satellite communications (SATCOM) network design and performance assessments. You find discussions on a wide class of SATCOM networks using satellites as core components, as well as coverage key applications in the field. This in-depth resource presents a broad range of critical topics, from geosynchronous Earth orbiting (GEO) satellites and direct broadcast satellite systems, to low Earth orbiting (LEO) satellites, radio standards and protocols.This invaluable reference explains the many specific uses of

  14. Sentiment analysis on smoking in social networks.

    Science.gov (United States)

    Sofean, Mustafa; Smith, Matthew

    2013-01-01

    Online social networks play a vital role in daily life to share the opinions or behaviors on different topics. The data of social networks can be used to understand health-related behaviors. In this work, we used Twitter status updates to survey of smoking behaviors among the users. We introduce approach to classify the sentiment of smoke-related tweets into positive and negative tweets. The classifier is based on the Support Vector Machines (SVMs) and can achieve high accuracy up to 86%.

  15. Network graph analysis and visualization with Gephi

    CERN Document Server

    Cherven, Ken

    2013-01-01

    A practical, hands-on guide, that provides you with all the tools you need to visualize and analyze your data using network graphs with Gephi.This book is for data analysts who want to intuitively reveal patterns and trends, highlight outliers, and tell stories with their data using Gephi. It is great for anyone looking to explore interactions within network datasets, whether the data comes from social media or elsewhere. It is also a valuable resource for those seeking to learn more about Gephi without being overwhelmed by technical details.

  16. Analysis of Blocking Rate and Bandwidth Usage of Mobile IPTV Services in Wireless Cellular Networks

    Directory of Open Access Journals (Sweden)

    Mingfu Li

    2014-01-01

    Full Text Available Mobile IPTV services over wireless cellular networks become more and more popular, owing to the significant growth in access bandwidth of wireless cellular networks such as 3G/4G and WiMAX. However, the spectrum resources of wireless cellular networks is rare. How to enhance the spectral efficiency of mobile networks becomes an important issue. Unicast, broadcast, and multicast are the most important transport schemes for offering mobile IPTV services over wireless cellular networks. Therefore, bandwidth usages and blocking rates of unicast, broadcast, and multicast IPTV services were analyzed and compared in this paper. Simulations were also conducted to validate the analytical results. Numerical results demonstrate that the presented analysis is correct, and multicast scheme achieves the best bandwidth usage and blocking rate performance, relative to the other two schemes.

  17. Analysis of blocking rate and bandwidth usage of mobile IPTV services in wireless cellular networks.

    Science.gov (United States)

    Li, Mingfu

    2014-01-01

    Mobile IPTV services over wireless cellular networks become more and more popular, owing to the significant growth in access bandwidth of wireless cellular networks such as 3G/4G and WiMAX. However, the spectrum resources of wireless cellular networks is rare. How to enhance the spectral efficiency of mobile networks becomes an important issue. Unicast, broadcast, and multicast are the most important transport schemes for offering mobile IPTV services over wireless cellular networks. Therefore, bandwidth usages and blocking rates of unicast, broadcast, and multicast IPTV services were analyzed and compared in this paper. Simulations were also conducted to validate the analytical results. Numerical results demonstrate that the presented analysis is correct, and multicast scheme achieves the best bandwidth usage and blocking rate performance, relative to the other two schemes.

  18. SMEX05 Soil Climate Analysis Network (SCAN) Data: Iowa

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set contains measurements taken during the Soil Moisture Experiment 2005 (SMEX05) from 10 June 2005 through 03 July 2005 at Soil Climate Analysis Network...

  19. Network Analysis of Clinical Placement of Athletic Training Students

    National Research Council Canada - National Science Library

    M G Miller; C Harvatt; K Hirsch; W R Holcomb

    2017-01-01

    An abstract of a study by Miller et al determining communication aspects using social network analysis for on-campus and off campus clinical placement sites of undergraduate athletic training students is presented...

  20. Error performance analysis in downlink cellular networks with interference management

    KAUST Repository

    Afify, Laila H.

    2015-05-01

    Modeling aggregate network interference in cellular networks has recently gained immense attention both in academia and industry. While stochastic geometry based models have succeeded to account for the cellular network geometry, they mostly abstract many important wireless communication system aspects (e.g., modulation techniques, signal recovery techniques). Recently, a novel stochastic geometry model, based on the Equivalent-in-Distribution (EiD) approach, succeeded to capture the aforementioned communication system aspects and extend the analysis to averaged error performance, however, on the expense of increasing the modeling complexity. Inspired by the EiD approach, the analysis developed in [1] takes into consideration the key system parameters, while providing a simple tractable analysis. In this paper, we extend this framework to study the effect of different interference management techniques in downlink cellular network. The accuracy of the proposed analysis is verified via Monte Carlo simulations.

  1. Analysis of the Air Transport Network Characteristics of Major Airports

    Directory of Open Access Journals (Sweden)

    Min Geun Song

    2017-09-01

    Full Text Available The world's major airports are directly connected to hundreds of airports without intermediate routes. This connectivity can be described as the network in which the airport becomes a node and the route becomes a connection line. In this regard, this study analyzes the air transport network of 1,060 airports using the social network analysis (SNA methodology. We consolidated the data from three airline alliances and established a network of 1,060 airports and 5,580 routes in 173 countries. Many previous studies on air transport network examined several specific airports or regions and mainly utilized the internal indicators of airports. Conversely, this study conducted a comprehensive analysis covering 173 countries by using air route, which is an external indicator of airports. This study presented the general characteristics of major countries and regions from the perspective of SNA and compared the individual networks of the United States and China, which have the greatest influence on international air logistics within the scope of the entire network analysis. This study can aid in the understanding of air transport networks and logistics connectivity in inter-city and inter-country transport.

  2. Analysis of Network Topologies Underlying Ethylene Growth Response Kinetics

    Directory of Open Access Journals (Sweden)

    Aaron M. Prescott

    2016-08-01

    Full Text Available Most models for ethylene signaling involve a linear pathway. However, measurements of seedling growth kinetics when ethylene is applied and removed have resulted in more complex network models that include coherent feedforward, negative feedback, and positive feedback motifs. However, the dynamical responses of the proposed networks have not been explored in a quantitative manner. Here, we explore (i whether any of the proposed models are capable of producing growth-response behaviors consistent with experimental observations and (ii what mechanistic roles various parts of the network topologies play in ethylene signaling. To address this, we used computational methods to explore two general network topologies: The first contains a coherent feedforward loop that inhibits growth and a negative feedback from growth onto itself (CFF/NFB. In the second, ethylene promotes the cleavage of EIN2, with the product of the cleavage inhibiting growth and promoting the production of EIN2 through a positive feedback loop (PFB. Since few network parameters for ethylene signaling are known in detail, we used an evolutionary algorithm to explore sets of parameters that produce behaviors similar to experimental growth response kinetics of both wildtype and mutant seedlings. We generated a library of parameter sets by independently running the evolutionary algorithm many times. Both network topologies produce behavior consistent with experimental observations and analysis of the parameter sets allows us to identify important network interactions and parameter constraints. We additionally screened these parameter sets for growth recovery in the presence of sub-saturating ethylene doses, which is an experimentally-observed property that emerges in some of the evolved parameter sets. Finally, we probed simplified networks maintaining key features of the CFF/NFB and PFB topologies. From this, we verified observations drawn from the larger networks about mechanisms

  3. Modular analysis of gene networks by linear temporal logic.

    Science.gov (United States)

    Ito, Sohei; Ichinose, Takuma; Shimakawa, Masaya; Izumi, Naoko; Hagihara, Shigeki; Yonezaki, Naoki

    2013-03-25

    Despite a lot of advances in biology and genomics, it is still difficult to utilise such valuable knowledge and information to understand and analyse large biological systems due to high computational complexity. In this paper we propose a modular method with which from several small network analyses we analyse a large network by integrating them. This method is based on the qualitative framework proposed by authors in which an analysis of gene networks is reduced to checking satisfiability of linear temporal logic formulae. The problem of linear temporal logic satisfiability checking needs exponential time in the size of a formula. Thus it is difficult to analyse large networks directly in this method since the size of a formula grows linearly to the size of a network. The modular method alleviates this computational difficulty. We show some experimental results and see how we benefit from the modular analysis method.

  4. Intracellular organelle networks: Understanding their organization and communication through systems-level modeling and analysis

    Institute of Scientific and Technical Information of China (English)

    Qinle Ba; Ge Yang

    2017-01-01

    BACKGROUND:Membrane-bound intracellular organelles are biochemically distinct compartments used by eukaryotic cells for serving specialized physiological functions and organizing their internal environment.Recent studies revealed surprisingly extensive communication between these organelles and highlighted the network nature of their organization and communication.Since organization and communication of the organelles are carried out at the systems level through their networks,systems-level studies are essential for understanding the underlying mechanisms.METHODS:We reviewed recent studies that used systems-level quantitative modeling and analysis to understand organization and communication of intracellular organelle networks.RESULTS:We first review modeling and analysis studies on how fusion/fission and degradation/biogenesis,two essential and closely related classes of activities of individual organelles,collectively mediate the dynamic organization of their networks.We then tum to another important aspect of the dynamic organization of the organelle networks,namely how organelles are physically connected within their networks,a property referred to as the topology of the networks in mathematics,and summarize some of their distinct properties.Lastly,we briefly review modeling and analysis studies that aim to understand communication between different organelle networks,focusing on cellular calcium homeostasis as an example.We conclude with a brief discussion of future directions for research in this area.CONCLUSIONS:Together,the reviewed studies provide critical insights into how diverse activities of individual organelles collectively mediate the organization and communication of their networks.They demonstrate the essential role of systemslevel modeling and analysis in understanding complex behavior of such networks.

  5. Sample-Starved Large Scale Network Analysis

    Science.gov (United States)

    2016-05-05

    Applications to materials science 2.1 Foundational principles for large scale inference on structure of covariance We developed general principles for...concise but accessible format. These principles are applicable to large-scale complex network applications arising genomics , connectomics, eco-informatics...available to estimate or detect patterns in the matrix. 15. SUBJECT TERMS multivariate dependency structure multivariate spatio-temporal prediction

  6. Using Citation Network Analysis in Educational Technology

    Science.gov (United States)

    Cho, Yonjoo; Park, Sunyoung

    2012-01-01

    Previous reviews in the field of Educational Technology (ET) have revealed some publication patterns according to authors, institutions, and affiliations. However, those previous reviews focused only on the rankings of individual authors and institutions, and did not provide qualitative details on relations and networks of scholars and scholarly…

  7. Metabolome based reaction graphs of M. tuberculosis and M. leprae: a comparative network analysis.

    Directory of Open Access Journals (Sweden)

    Ketki D Verkhedkar

    Full Text Available BACKGROUND: Several types of networks, such as transcriptional, metabolic or protein-protein interaction networks of various organisms have been constructed, that have provided a variety of insights into metabolism and regulation. Here, we seek to exploit the reaction-based networks of three organisms for comparative genomics. We use concepts from spectral graph theory to systematically determine how differences in basic metabolism of organisms are reflected at the systems level and in the overall topological structures of their metabolic networks. METHODOLOGY/PRINCIPAL FINDINGS: Metabolome-based reaction networks of Mycobacterium tuberculosis, Mycobacterium leprae and Escherichia coli have been constructed based on the KEGG LIGAND database, followed by graph spectral analysis of the network to identify hubs as well as the sub-clustering of reactions. The shortest and alternate paths in the reaction networks have also been examined. Sub-cluster profiling demonstrates that reactions of the mycolic acid pathway in mycobacteria form a tightly connected sub-cluster. Identification of hubs reveals reactions involving glutamate to be central to mycobacterial metabolism, and pyruvate to be at the centre of the E. coli metabolome. The analysis of shortest paths between reactions has revealed several paths that are shorter than well established pathways. CONCLUSIONS: We conclude that severe downsizing of the leprae genome has not significantly altered the global structure of its reaction network but has reduced the total number of alternate paths between its reactions while keeping the shortest paths between them intact. The hubs in the mycobacterial networks that are absent in the human metabolome can be explored as potential drug targets. This work demonstrates the usefulness of constructing metabolome based networks of organisms and the feasibility of their analyses through graph spectral methods. The insights obtained from such studies provide a

  8. Metabolome based reaction graphs of M. tuberculosis and M. leprae: a comparative network analysis.

    Science.gov (United States)

    Verkhedkar, Ketki D; Raman, Karthik; Chandra, Nagasuma R; Vishveshwara, Saraswathi

    2007-09-12

    Several types of networks, such as transcriptional, metabolic or protein-protein interaction networks of various organisms have been constructed, that have provided a variety of insights into metabolism and regulation. Here, we seek to exploit the reaction-based networks of three organisms for comparative genomics. We use concepts from spectral graph theory to systematically determine how differences in basic metabolism of organisms are reflected at the systems level and in the overall topological structures of their metabolic networks. Metabolome-based reaction networks of Mycobacterium tuberculosis, Mycobacterium leprae and Escherichia coli have been constructed based on the KEGG LIGAND database, followed by graph spectral analysis of the network to identify hubs as well as the sub-clustering of reactions. The shortest and alternate paths in the reaction networks have also been examined. Sub-cluster profiling demonstrates that reactions of the mycolic acid pathway in mycobacteria form a tightly connected sub-cluster. Identification of hubs reveals reactions involving glutamate to be central to mycobacterial metabolism, and pyruvate to be at the centre of the E. coli metabolome. The analysis of shortest paths between reactions has revealed several paths that are shorter than well established pathways. We conclude that severe downsizing of the leprae genome has not significantly altered the global structure of its reaction network but has reduced the total number of alternate paths between its reactions while keeping the shortest paths between them intact. The hubs in the mycobacterial networks that are absent in the human metabolome can be explored as potential drug targets. This work demonstrates the usefulness of constructing metabolome based networks of organisms and the feasibility of their analyses through graph spectral methods. The insights obtained from such studies provide a broad overview of the similarities and differences between organisms, taking

  9. Abnormal brain white matter network in young smokers: a graph theory analysis study.

    Science.gov (United States)

    Zhang, Yajuan; Li, Min; Wang, Ruonan; Bi, Yanzhi; Li, Yangding; Yi, Zhang; Liu, Jixin; Yu, Dahua; Yuan, Kai

    2017-03-13

    Previous diffusion tensor imaging (DTI) studies had investigated the white matter (WM) integrity abnormalities in some specific fiber bundles in smokers. However, little is known about the changes in topological organization of WM structural network in young smokers. In current study, we acquired DTI datasets from 58 male young smokers and 51 matched nonsmokers and constructed the WM networks by the deterministic fiber tracking approach. Graph theoretical analysis was used to compare the topological parameters of WM network (global and nodal) and the inter-regional fractional anisotropy (FA) weighted WM connections between groups. The results demonstrated that both young smokers and nonsmokers had small-world topology in WM network. Further analysis revealed that the young smokers exhibited the abnormal topological organization, i.e., increased network strength, global efficiency, and decreased shortest path length. In addition, the increased nodal efficiency predominately was located in frontal cortex, striatum and anterior cingulate gyrus (ACG) in smokers. Moreover, based on network-based statistic (NBS) approach, the significant increased FA-weighted WM connections were mainly found in the PFC, ACG and supplementary motor area (SMA) regions. Meanwhile, the network parameters were correlated with the nicotine dependence severity (FTND) scores, and the nodal efficiency of orbitofrontal cortex was positive correlation with the cigarette per day (CPD) in young smokers. We revealed the abnormal topological organization of WM network in young smokers, which may improve our understanding of the neural mechanism of young smokers form WM topological organization level.

  10. Differential dependency network analysis to identify condition-specific topological changes in biological networks.

    Science.gov (United States)

    Zhang, Bai; Li, Huai; Riggins, Rebecca B; Zhan, Ming; Xuan, Jianhua; Zhang, Zhen; Hoffman, Eric P; Clarke, Robert; Wang, Yue

    2009-02-15

    Significant efforts have been made to acquire data under different conditions and to construct static networks that can explain various gene regulation mechanisms. However, gene regulatory networks are dynamic and condition-specific; under different conditions, networks exhibit different regulation patterns accompanied by different transcriptional network topologies. Thus, an investigation on the topological changes in transcriptional networks can facilitate the understanding of cell development or provide novel insights into the pathophysiology of certain diseases, and help identify the key genetic players that could serve as biomarkers or drug targets. Here, we report a differential dependency network (DDN) analysis to detect statistically significant topological changes in the transcriptional networks between two biological conditions. We propose a local dependency model to represent the local structures of a network by a set of conditional probabilities. We develop an efficient learning algorithm to learn the local dependency model using the Lasso technique. A permutation test is subsequently performed to estimate the statistical significance of each learned local structure. In testing on a simulation dataset, the proposed algorithm accurately detected all the genes with network topological changes. The method was then applied to the estrogen-dependent T-47D estrogen receptor-positive (ER+) breast cancer cell line datasets and human and mouse embryonic stem cell datasets. In both experiments using real microarray datasets, the proposed method produced biologically meaningful results. We expect DDN to emerge as an important bioinformatics tool in transcriptional network analyses. While we focus specifically on transcriptional networks, the DDN method we introduce here is generally applicable to other biological networks with similar characteristics. The DDN MATLAB toolbox and experiment data are available at http://www.cbil.ece.vt.edu/software.htm.

  11. Homonyms's complex networks to semantic analysis textual

    Directory of Open Access Journals (Sweden)

    Jadson da Silva Santos

    2017-04-01

    Full Text Available Introduction: Study centres in natural language processing already spread and the study have several applications. Relate with this research area, it is common the use technic for manipulation a text. These technic is be able to determine the word morphology and the word syntax. There are tools that do this work, however adding engines for semantic identification of the words is essential for increase the automatic understanding the used language. Objective: On the basis of that, This paper present the process of using complex networks as a comparative database to determine by context the meaning of words that express different positions. Moreover, they are classified as same morphology and syntax , as with some homonyms. Methodology: Through of a experimental methodology, the model proposed it is based in consolidate researches in Natural Language Processing for building a Complex Network that receives as vertices the words of a certain text and establishes its connections from the occurrence of adjacency between these terms. Therefore, observing the variations of network, it is identified how to textual namesakes are related and through an context analyzed how if be there, check whether it is used to express more than one meaning. Results: A generic process with stages of preprocessing, building of a Complex Network used to Natural Language Processing for the building of a network homonyms to extract semantic information textual. Conclusions: The analyze of homonyms selected and labeled is the process not only morphosyntatic, adding semantic in the phrase, paragraph or text where the words are applied. However, with Natural Language Processing an events and philosophical facts can be better analyzed through of a world written textually, for example, the power of argument and the writing of an author profile.

  12. Functional Interaction Network Construction and Analysis for Disease Discovery.

    Science.gov (United States)

    Wu, Guanming; Haw, Robin

    2017-01-01

    Network-based approaches project seemingly unrelated genes or proteins onto a large-scale network context, therefore providing a holistic visualization and analysis platform for genomic data generated from high-throughput experiments, reducing the dimensionality of data via using network modules and increasing the statistic analysis power. Based on the Reactome database, the most popular and comprehensive open-source biological pathway knowledgebase, we have developed a highly reliable protein functional interaction network covering around 60 % of total human genes and an app called ReactomeFIViz for Cytoscape, the most popular biological network visualization and analysis platform. In this chapter, we describe the detailed procedures on how this functional interaction network is constructed by integrating multiple external data sources, extracting functional interactions from human curated pathway databases, building a machine learning classifier called a Naïve Bayesian Classifier, predicting interactions based on the trained Naïve Bayesian Classifier, and finally constructing the functional interaction database. We also provide an example on how to use ReactomeFIViz for performing network-based data analysis for a list of genes.

  13. Learning Bayesian networks from big meteorological spatial datasets. An alternative to complex network analysis

    Science.gov (United States)

    Gutiérrez, Jose Manuel; San Martín, Daniel; Herrera, Sixto; Santiago Cofiño, Antonio

    2016-04-01

    The growing availability of spatial datasets (observations, reanalysis, and regional and global climate models) demands efficient multivariate spatial modeling techniques for many problems of interest (e.g. teleconnection analysis, multi-site downscaling, etc.). Complex networks have been recently applied in this context using graphs built from pairwise correlations between the different stations (or grid boxes) forming the dataset. However, this analysis does not take into account the full dependence structure underlying the data, gien by all possible marginal and conditional dependencies among the stations, and does not allow a probabilistic analysis of the dataset. In this talk we introduce Bayesian networks as an alternative multivariate analysis and modeling data-driven technique which allows building a joint probability distribution of the stations including all relevant dependencies in the dataset. Bayesian networks is a sound machine learning technique using a graph to 1) encode the main dependencies among the variables and 2) to obtain a factorization of the joint probability distribution of the stations given by a reduced number of parameters. For a particular problem, the resulting graph provides a qualitative analysis of the spatial relationships in the dataset (alternative to complex network analysis), and the resulting model allows for a probabilistic analysis of the dataset. Bayesian networks have been widely applied in many fields, but their use in climate problems is hampered by the large number of variables (stations) involved in this field, since the complexity of the existing algorithms to learn from data the graphical structure grows nonlinearly with the number of variables. In this contribution we present a modified local learning algorithm for Bayesian networks adapted to this problem, which allows inferring the graphical structure for thousands of stations (from observations) and/or gridboxes (from model simulations) thus providing new

  14. The network analysis of urban streets: A dual approach

    Science.gov (United States)

    Porta, Sergio; Crucitti, Paolo; Latora, Vito

    2006-09-01

    The application of the network approach to the urban case poses several questions in terms of how to deal with metric distances, what kind of graph representation to use, what kind of measures to investigate, how to deepen the correlation between measures of the structure of the network and measures of the dynamics on the network, what are the possible contributions from the GIS community. In this paper, the author considers six cases of urban street networks characterized by different patterns and historical roots. The authors propose a representation of the street networks based firstly on a primal graph, where intersections are turned into nodes and streets into edges. In a second step, a dual graph, where streets are nodes and intersections are edges, is constructed by means of a generalization model named Intersection Continuity Negotiation, which allows to acknowledge the continuity of streets over a plurality of edges. Finally, the authors address a comparative study of some structural properties of the dual graphs, seeking significant similarities among clusters of cases. A wide set of network analysis techniques are implemented over the dual graph: in particular the authors show that the absence of any clue of assortativity differentiates urban street networks from other non-geographic systems and that most of the considered networks have a broad degree distribution typical of scale-free networks and exhibit small-world properties as well.

  15. Sediment Analysis Network for Decision Support (SANDS)

    Science.gov (United States)

    Hardin, D. M.; Keiser, K.; Graves, S. J.; Conover, H.; Ebersole, S.

    2009-12-01

    Since the year 2000, Eastern Louisiana, coastal Mississippi, Alabama, and the western Florida panhandle have been affected by 28 tropical storms, seven of which were hurricanes. These tropical cyclones have significantly altered normal coastal processes and characteristics in the Gulf region through sediment disturbance. Although tides, seasonality, and agricultural development influence suspended sediment and sediment deposition over periods of time, tropical storm activity has the capability of moving the largest sediment loads in the shortest periods of time for coastal areas. The importance of sediments upon water quality, coastal erosion, habitats and nutrients has made their study and monitoring vital to decision makers in the region. Currently agencies such as United States Army Corps of Engineers (USACE), NASA, and Geological Survey of Alabama (GSA) are employing a variety of in-situ and airborne based measurements to assess and monitor sediment loading and deposition. These methods provide highly accurate information but are limited in geographic range, are not continuous over a region and, in the case of airborne LIDAR are expensive and do not recur on a regular basis. Multi-temporal and multi-spectral satellite imagery that shows tropical-storm-induced suspended sediment and storm-surge sediment deposits can provide decision makers with immediate and long-term information about the impacts of tropical storms and hurricanes. It can also be valuable for those conducting research and for projects related to coastal issues such as recovery, planning, management, and mitigation. The recently awarded Sediment Analysis Network for Decision Support will generate decision support products using NASA satellite observations from MODIS, Landsat and SeaWiFS instruments to support resource management, planning, and decision making activities in the Gulf of Mexico. Specifically, SANDS will generate decision support products that address the impacts of tropical storms

  16. The Global Research Collaboration of Network Meta-Analysis: A Social Network Analysis.

    Science.gov (United States)

    Li, Lun; Catalá-López, Ferrán; Alonso-Arroyo, Adolfo; Tian, Jinhui; Aleixandre-Benavent, Rafael; Pieper, Dawid; Ge, Long; Yao, Liang; Wang, Quan; Yang, Kehu

    Research collaborations in biomedical research have evolved over time. No studies have addressed research collaboration in network meta-analysis (NMA). In this study, we used social network analysis methods to characterize global collaboration patterns of published NMAs over the past decades. PubMed, EMBASE, Web of Science and the Cochrane Library were searched (at 9th July, 2015) to include systematic reviews incorporating NMA. Two reviewers independently selected studies and cross-checked the standardized data. Data was analyzed using Ucinet 6.0 and SPSS 17.0. NetDraw software was used to draw social networks. 771 NMAs published in 336 journals from 3459 authors and 1258 institutions in 49 countries through the period 1997-2015 were included. More than three-quarters (n = 625; 81.06%) of the NMAs were published in the last 5-years. The BMJ (4.93%), Current Medical Research and Opinion (4.67%) and PLOS One (4.02%) were the journals that published the greatest number of NMAs. The UK and the USA (followed by Canada, China, the Netherlands, Italy and Germany) headed the absolute global productivity ranking in number of NMAs. The top 20 authors and institutions with the highest publication rates were identified. Overall, 43 clusters of authors (four major groups: one with 37 members, one with 12 members, one with 11 members and one with 10 members) and 21 clusters of institutions (two major groups: one with 62 members and one with 20 members) were identified. The most prolific authors were affiliated with academic institutions and private consulting firms. 181 consulting firms and pharmaceutical industries (14.39% of institutions) were involved in 199 NMAs (25.81% of total publications). Although there were increases in international and inter-institution collaborations, the research collaboration by authors, institutions and countries were still weak and most collaboration groups were small sizes. Scientific production on NMA is increasing worldwide with research

  17. Investment Valuation Analysis with Artificial Neural Networks

    Directory of Open Access Journals (Sweden)

    Hüseyin İNCE

    2017-07-01

    Full Text Available This paper shows that discounted cash flow and net present value, which are traditional investment valuation models, can be combined with artificial neural network model forecasting. The main inputs for the valuation models, such as revenue, costs, capital expenditure, and their growth rates, are heavily related to sector dynamics and macroeconomics. The growth rates of those inputs are related to inflation and exchange rates. Therefore, predicting inflation and exchange rates is a critical issue for the valuation output. In this paper, the Turkish economy’s inflation rate and the exchange rate of USD/TRY are forecast by artificial neural networks and implemented to the discounted cash flow model. Finally, the results are benchmarked with conventional practices.

  18. Policy Analysis Screening System (PASS) demonstration: sample queries and terminal instructions

    Energy Technology Data Exchange (ETDEWEB)

    None

    1979-10-16

    This document contains the input and output for the Policy Analysis Screening System (PASS) demonstration. This demonstration is stored on a portable disk at the Environmental Impacts Division. Sample queries presented here include: (1) how to use PASS; (2) estimated 1995 energy consumption from Mid-Range Energy-Forecasting System (MEFS) data base; (3) pollution projections from Strategic Environmental Assessment System (SEAS) data base; (4) diesel auto regulations; (5) diesel auto health effects; (6) oil shale health and safety measures; (7) water pollution effects of SRC; (8) acid rainfall from Energy Environmental Statistics (EES) data base; 1990 EIA electric generation by fuel type; sulfate concentrations by Federal region; forecast of 1995 SO/sub 2/ emissions in Region III; and estimated electrical generating capacity in California to 1990. The file name for each query is included.

  19. Temporal Network Analysis of Literary Texts

    OpenAIRE

    Prado, Sandra D.; Dahmen, Silvio R.; Bazzan, Ana L. C.; Mac Carron, Padraig; Kenna, Ralph

    2016-01-01

    We study temporal networks of characters in literature focusing on "Alice's Adventures in Wonderland" (1865) by Lewis Carroll and the anonymous "La Chanson de Roland" (around 1100). The former, one of the most influential pieces of nonsense literature ever written, describes the adventures of Alice in a fantasy world with logic plays interspersed along the narrative. The latter, a song of heroic deeds, depicts the Battle of Roncevaux in 778 A.D. during Charlemagne's campaign on the Iberian Pe...

  20. Social Network Analysis in Frontier Capital Markets

    Science.gov (United States)

    2012-06-01

    markets using mathematical techniques to identify and evaluate the nodes in the network. Initially focusing on stock exchange personnel and government...values. He is currently affiliated with the Trinidad and Tobago Stock Exchange , a brokerage firm, and a federal anti-corruption commission. He is also on...delisted from the Dar es Salaam stock exchange in July 2011 because it failed to submit 2009 and 2010 financial statements. Ghana Four organizations

  1. The Network's Data Security Risk Analysis

    Directory of Open Access Journals (Sweden)

    Emil BURTESCU

    2008-01-01

    Full Text Available Establishing the networks security risk can be a very difficult operation especially for the small companies which, from financial reasons can't appeal at specialist in this domain, or for the medium or large companies that don't have experience. The following method proposes not to use complex financial calculus to determine the loss level and the value of impact making the determination of risk level a lot easier.

  2. Traffic incidents analysis on Slovenian motorway network

    OpenAIRE

    Jakše, Bojan

    2013-01-01

    In my bachelor thesis we were analysing traffic incidents (such as accidents, congestions, heavy snow, etc.) on Slovenian road network, specifically we focused on incidents on motorways. We were starting from database of incidents provided by Prometno-informacijski center (Traffic information center) and added information about hourly traffic at the moment of incident. We were also researching possible correlations between weather and traffic congestions and accidents as well as behaviour of ...

  3. Supporting MOOC Instruction with Social Network Analysis

    OpenAIRE

    Sinha, Tanmay

    2014-01-01

    With an expansive and ubiquitously available gold mine of educational data, Massive Open Online courses (MOOCs) have become the an important foci of learning analytics research. In this paper, we investigate potential reasons as to why are these digitalized learning repositories being plagued with huge attrition rates. We analyze an ongoing online course offered in Coursera using a social network perspective, with an objective to identify students who are actively participating in course disc...

  4. Advanced Reactor Passive System Reliability Demonstration Analysis for an External Event

    Directory of Open Access Journals (Sweden)

    Matthew Bucknor

    2017-03-01

    Full Text Available Many advanced reactor designs rely on passive systems to fulfill safety functions during accident sequences. These systems depend heavily on boundary conditions to induce a motive force, meaning the system can fail to operate as intended because of deviations in boundary conditions, rather than as the result of physical failures. Furthermore, passive systems may operate in intermediate or degraded modes. These factors make passive system operation difficult to characterize within a traditional probabilistic framework that only recognizes discrete operating modes and does not allow for the explicit consideration of time-dependent boundary conditions. Argonne National Laboratory has been examining various methodologies for assessing passive system reliability within a probabilistic risk assessment for a station blackout event at an advanced small modular reactor. This paper provides an overview of a passive system reliability demonstration analysis for an external event. Considering an earthquake with the possibility of site flooding, the analysis focuses on the behavior of the passive Reactor Cavity Cooling System following potential physical damage and system flooding. The assessment approach seeks to combine mechanistic and simulation-based methods to leverage the benefits of the simulation-based approach without the need to substantially deviate from conventional probabilistic risk assessment techniques. Although this study is presented as only an example analysis, the results appear to demonstrate a high level of reliability of the Reactor Cavity Cooling System (and the reactor system in general for the postulated transient event.

  5. Advanced reactor passive system reliability demonstration analysis for an external event

    Energy Technology Data Exchange (ETDEWEB)

    Bucknor, Matthew; Grabaskas, David; Brunett, Acacia J.; Grelle, Austin [Argonne National Laboratory, Argonne (United States)

    2017-03-15

    Many advanced reactor designs rely on passive systems to fulfill safety functions during accident sequences. These systems depend heavily on boundary conditions to induce a motive force, meaning the system can fail to operate as intended because of deviations in boundary conditions, rather than as the result of physical failures. Furthermore, passive systems may operate in intermediate or degraded modes. These factors make passive system operation difficult to characterize within a traditional probabilistic framework that only recognizes discrete operating modes and does not allow for the explicit consideration of time-dependent boundary conditions. Argonne National Laboratory has been examining various methodologies for assessing passive system reliability within a probabilistic risk assessment for a station blackout event at an advanced small modular reactor. This paper provides an overview of a passive system reliability demonstration analysis for an external event. Considering an earthquake with the possibility of site flooding, the analysis focuses on the behavior of the passive Reactor Cavity Cooling System following potential physical damage and system flooding. The assessment approach seeks to combine mechanistic and simulation-based methods to leverage the benefits of the simulation-based approach without the need to substantially deviate from conventional probabilistic risk assessment techniques. Although this study is presented as only an example analysis, the results appear to demonstrate a high level of reliability of the Reactor Cavity Cooling System (and the reactor system in general) for the postulated transient event.

  6. Analysis and design of networked control systems

    CERN Document Server

    You, Keyou; Xie, Lihua

    2015-01-01

    This monograph focuses on characterizing the stability and performance consequences of inserting limited-capacity communication networks within a control loop. The text shows how integration of the ideas of control and estimation with those of communication and information theory can be used to provide important insights concerning several fundamental problems such as: ·         minimum data rate for stabilization of linear systems over noisy channels; ·         minimum network requirement for stabilization of linear systems over fading channels; and ·         stability of Kalman filtering with intermittent observations. A fundamental link is revealed between the topological entropy of linear dynamical systems and the capacities of communication channels. The design of a logarithmic quantizer for the stabilization of linear systems under various network environments is also extensively discussed and solutions to many problems of Kalman filtering with intermittent observations are de...

  7. Qualitative Analysis of Commercial Social Network Profiles

    Science.gov (United States)

    Melendez, Lester; Wolfson, Ouri; Adjouadi, Malek; Rishe, Naphtali

    Social-networking sites have become an integral part of many users' daily internet routine. Commercial enterprises have been quick to recognize this and are subsequently creating profiles for many of their products and services. Commercial enterprises use social network profiles to target and interact with potential customers as well as to provide a gateway for users of the product or service to interact with each other. Many commercial enterprises use the statistics from their product or service's social network profile to tout the popularity and success of the product or service being showcased. They will use statistics such as number of friends, number of daily visits, number of interactions, and other similar measurements to quantify their claims. These statistics are often not a clear indication of the true popularity and success of the product. In this chapter the term product is used to refer to any tangible or intangible product, service, celebrity, personality, film, book, or other entity produced by a commercial enterprise.

  8. AZ-101 Mixer Pump Demonstration and Tests Data Management Analysis Plan

    Energy Technology Data Exchange (ETDEWEB)

    DOUGLAS, D.G.

    2000-02-22

    This document provides a plan for the analysis of the data collected during the AZ-101 Mixer Pump Demonstration and Tests. This document was prepared after a review of the AZ-101 Mixer Pump Test Plan (Revision 4) [1] and other materials. The plan emphasizes a structured and well-ordered approach towards handling and examining the data. This plan presumes that the data will be collected and organized into a unified body of data, well annotated and bearing the date and time of each record. The analysis of this data will follow a methodical series of steps that are focused on well-defined objectives. Section 2 of this plan describes how the data analysis will proceed from the real-time monitoring of some of the key sensor data to the final analysis of the three-dimensional distribution of suspended solids. This section also identifies the various sensors or sensor systems and associates them with the various functions they serve during the test program. Section 3 provides an overview of the objectives of the AZ-101 test program and describes the data that will be analyzed to support that test. The objectives are: (1) to demonstrate that the mixer pumps can be operated within the operating requirements; (2) to demonstrate that the mixer pumps can mobilize the sludge in sufficient quantities to provide feed to the private contractor facility, and (3) to determine if the in-tank instrumentation is sufficient to monitor sludge mobilization and mixer pump operation. Section 3 also describes the interim analysis that organizes the data during the test, so the analysis can be more readily accomplished. Section 4 describes the spatial orientation of the various sensors in the tank. This section is useful in visualizing the relationship of the Sensors in terms of their location in the tank and how the data from these sensors may be related to the data from other sensors. Section 5 provides a summary of the various analyses that will be performed on the data during the test

  9. Identification of Conserved Moieties in Metabolic Networks by Graph Theoretical Analysis of Atom Transition Networks

    Science.gov (United States)

    Haraldsdóttir, Hulda S.; Fleming, Ronan M. T.

    2016-01-01

    Conserved moieties are groups of atoms that remain intact in all reactions of a metabolic network. Identification of conserved moieties gives insight into the structure and function of metabolic networks and facilitates metabolic modelling. All moiety conservation relations can be represented as nonnegative integer vectors in the left null space of the stoichiometric matrix corresponding to a biochemical network. Algorithms exist to compute such vectors based only on reaction stoichiometry but their computational complexity has limited their application to relatively small metabolic networks. Moreover, the vectors returned by existing algorithms do not, in general, represent conservation of a specific moiety with a defined atomic structure. Here, we show that identification of conserved moieties requires data on reaction atom mappings in addition to stoichiometry. We present a novel method to identify conserved moieties in metabolic networks by graph theoretical analysis of their underlying atom transition networks. Our method returns the exact group of atoms belonging to each conserved moiety as well as the corresponding vector in the left null space of the stoichiometric matrix. It can be implemented as a pipeline of polynomial time algorithms. Our implementation completes in under five minutes on a metabolic network with more than 4,000 mass balanced reactions. The scalability of the method enables extension of existing applications for moiety conservation relations to genome-scale metabolic networks. We also give examples of new applications made possible by elucidating the atomic structure of conserved moieties. PMID:27870845

  10. Bayesian analysis of heat pipe life test data for reliability demonstration testing

    Energy Technology Data Exchange (ETDEWEB)

    Bartholomew, R.J.; Martz, H.F.

    1985-01-01

    The demonstration testing duration requirements to establish a quantitative measure of assurance of expected lifetime for heat pipes was determined. The heat pipes are candidate devices for transporting heat generated in a nuclear reactor core to thermoelectric converters for use as a space-based electric power plant. A Bayesian analysis technique is employed, utilizing a limited Delphi survey, and a geometric mean accelerated test criterion involving heat pipe power (P) and temperature (T). Resulting calculations indicate considerable test savings can be achieved by employing the method, but development testing to determine heat pipe failure mechanisms should not be circumvented.

  11. Cross Deployment Networking and Systematic Performance Analysis of Underwater Wireless Sensor Networks.

    Science.gov (United States)

    Wei, Zhengxian; Song, Min; Yin, Guisheng; Wang, Hongbin; Ma, Xuefei; Song, Houbing

    2017-07-12

    Underwater wireless sensor networks (UWSNs) have become a new hot research area. However, due to the work dynamics and harsh ocean environment, how to obtain an UWSN with the best systematic performance while deploying as few sensor nodes as possible and setting up self-adaptive networking is an urgent problem that needs to be solved. Consequently, sensor deployment, networking, and performance calculation of UWSNs are challenging issues, hence the study in this paper centers on this topic and three relevant methods and models are put forward. Firstly, the normal body-centered cubic lattice to cross body-centered cubic lattice (CBCL) has been improved, and a deployment process and topology generation method are built. Then most importantly, a cross deployment networking method (CDNM) for UWSNs suitable for the underwater environment is proposed. Furthermore, a systematic quar-performance calculation model (SQPCM) is proposed from an integrated perspective, in which the systematic performance of a UWSN includes coverage, connectivity, durability and rapid-reactivity. Besides, measurement models are established based on the relationship between systematic performance and influencing parameters. Finally, the influencing parameters are divided into three types, namely, constraint parameters, device performance and networking parameters. Based on these, a networking parameters adjustment method (NPAM) for optimized systematic performance of UWSNs has been presented. The simulation results demonstrate that the approach proposed in this paper is feasible and efficient in networking and performance calculation of UWSNs.

  12. DNA sequence analysis using hierarchical ART-based classification networks

    Energy Technology Data Exchange (ETDEWEB)

    LeBlanc, C.; Hruska, S.I. [Florida State Univ., Tallahassee, FL (United States); Katholi, C.R.; Unnasch, T.R. [Univ. of Alabama, Birmingham, AL (United States)

    1994-12-31

    Adaptive resonance theory (ART) describes a class of artificial neural network architectures that act as classification tools which self-organize, work in real-time, and require no retraining to classify novel sequences. We have adapted ART networks to provide support to scientists attempting to categorize tandem repeat DNA fragments from Onchocerca volvulus. In this approach, sequences of DNA fragments are presented to multiple ART-based networks which are linked together into two (or more) tiers; the first provides coarse sequence classification while the sub- sequent tiers refine the classifications as needed. The overall rating of the resulting classification of fragments is measured using statistical techniques based on those introduced to validate results from traditional phylogenetic analysis. Tests of the Hierarchical ART-based Classification Network, or HABclass network, indicate its value as a fast, easy-to-use classification tool which adapts to new data without retraining on previously classified data.

  13. Sovereign public debt crisis in Europe. A network analysis

    Science.gov (United States)

    Matesanz, David; Ortega, Guillermo J.

    2015-10-01

    In this paper we analyse the evolving network structure of the quarterly public debt-to-GDP ratio from 2000 to 2014. By applying tools and concepts coming from complex systems we study the effects of the global financial crisis over public debt network connections and communities. Two main results arise from this analysis: firstly, countries public debts tend to synchronize their evolution, increasing global connectivity in the network and dramatically decreasing the number of communities. Secondly, a disruption in previous structure is observed at the time of the shock, emerging a more centralized and less diversify network topological organization which might be more prone to suffer contagion effects. This last fact is evidenced by an increasing tendency in countries of similar level of public debt to be connected between them, which we have quantified by the network assortativity.

  14. Modeling and Analysis of New Products Diffusion on Heterogeneous Networks

    Directory of Open Access Journals (Sweden)

    Shuping Li

    2014-01-01

    Full Text Available We present a heterogeneous networks model with the awareness stage and the decision-making stage to explain the process of new products diffusion. If mass media is neglected in the decision-making stage, there is a threshold whether the innovation diffusion is successful or not, or else it is proved that the network model has at least one positive equilibrium. For networks with the power-law degree distribution, numerical simulations confirm analytical results, and also at the same time, by numerical analysis of the influence of the network structure and persuasive advertisements on the density of adopters, we give two different products propagation strategies for two classes of nodes in scale-free networks.

  15. Spatial Distribution Characteristics of Healthcare Facilities in Nanjing: Network Point Pattern Analysis and Correlation Analysis.

    Science.gov (United States)

    Ni, Jianhua; Qian, Tianlu; Xi, Changbai; Rui, Yikang; Wang, Jiechen

    2016-08-18

    The spatial distribution of urban service facilities is largely constrained by the road network. In this study, network point pattern analysis and correlation analysis were used to analyze the relationship between road network and healthcare facility distribution. The weighted network kernel density estimation method proposed in this study identifies significant differences between the outside and inside areas of the Ming city wall. The results of network K-function analysis show that private hospitals are more evenly distributed than public hospitals, and pharmacy stores tend to cluster around hospitals along the road network. After computing the correlation analysis between different categorized hospitals and street centrality, we find that the distribution of these hospitals correlates highly with the street centralities, and that the correlations are higher with private and small hospitals than with public and large hospitals. The comprehensive analysis results could help examine the reasonability of existing urban healthcare facility distribution and optimize the location of new healthcare facilities.

  16. Improving Your Exploratory Factor Analysis for Ordinal Data: A Demonstration Using FACTOR

    Directory of Open Access Journals (Sweden)

    James Baglin

    2014-06-01

    Full Text Available Exploratory factor analysis (EFA methods are used extensively in the field of assessment and evaluation. Due to EFA's widespread use, common methods and practices have come under close scrutiny. A substantial body of literature has been compiled highlighting problems with many of the methods and practices used in EFA, and, in response, many guidelines have been proposed with the aim to improve application. Unfortunately, implementing recommended EFA practices has been restricted by the range of options available in commercial statistical packages and, perhaps, due to an absence of clear, practical - how-to' demonstrations. Consequently, this article describes the application of methods recommended to get the most out of your EFA. The article focuses on dealing with the common situation of analysing ordinal data as derived from Likert-type scales. These methods are demonstrated using the free, stand-alone, easy-to-use and powerful EFA package FACTOR (http://psico.fcep.urv.es/utilitats/factor/, Lorenzo-Seva & Ferrando, 2006. The demonstration applies the recommended techniques using an accompanying dataset, based on the Big 5 personality test. The outcomes obtained by the EFA using the recommended procedures through FACTOR are compared to the default techniques currently available in SPSS.

  17. SNAP: A General Purpose Network Analysis and Graph Mining Library.

    Science.gov (United States)

    Leskovec, Jure; Sosič, Rok

    2016-10-01

    Large networks are becoming a widely used abstraction for studying complex systems in a broad set of disciplines, ranging from social network analysis to molecular biology and neuroscience. Despite an increasing need to analyze and manipulate large networks, only a limited number of tools are available for this task. Here, we describe Stanford Network Analysis Platform (SNAP), a general-purpose, high-performance system that provides easy to use, high-level operations for analysis and manipulation of large networks. We present SNAP functionality, describe its implementational details, and give performance benchmarks. SNAP has been developed for single big-memory machines and it balances the trade-off between maximum performance, compact in-memory graph representation, and the ability to handle dynamic graphs where nodes and edges are being added or removed over time. SNAP can process massive networks with hundreds of millions of nodes and billions of edges. SNAP offers over 140 different graph algorithms that can efficiently manipulate large graphs, calculate structural properties, generate regular and random graphs, and handle attributes and meta-data on nodes and edges. Besides being able to handle large graphs, an additional strength of SNAP is that networks and their attributes are fully dynamic, they can be modified during the computation at low cost. SNAP is provided as an open source library in C++ as well as a module in Python. We also describe the Stanford Large Network Dataset, a set of social and information real-world networks and datasets, which we make publicly available. The collection is a complementary resource to our SNAP software and is widely used for development and benchmarking of graph analytics algorithms.

  18. HYPOTrace: image analysis software for measuring hypocotyl growth and shape demonstrated on Arabidopsis seedlings undergoing photomorphogenesis.

    Science.gov (United States)

    Wang, Liya; Uilecan, Ioan Vlad; Assadi, Amir H; Kozmik, Christine A; Spalding, Edgar P

    2009-04-01

    Analysis of time series of images can quantify plant growth and development, including the effects of genetic mutations (phenotypes) that give information about gene function. Here is demonstrated a software application named HYPOTrace that automatically extracts growth and shape information from electronic gray-scale images of Arabidopsis (Arabidopsis thaliana) seedlings. Key to the method is the iterative application of adaptive local principal components analysis to extract a set of ordered midline points (medial axis) from images of the seedling hypocotyl. Pixel intensity is weighted to avoid the medial axis being diverted by the cotyledons in areas where the two come in contact. An intensity feature useful for terminating the midline at the hypocotyl apex was isolated in each image by subtracting the baseline with a robust local regression algorithm. Applying the algorithm to time series of images of Arabidopsis seedlings responding to light resulted in automatic quantification of hypocotyl growth rate, apical hook opening, and phototropic bending with high spatiotemporal resolution. These functions are demonstrated here on wild-type, cryptochrome1, and phototropin1 seedlings for the purpose of showing that HYPOTrace generated expected results and to show how much richer the machine-vision description is compared to methods more typical in plant biology. HYPOTrace is expected to benefit seedling development research, particularly in the photomorphogenesis field, by replacing many tedious, error-prone manual measurements with a precise, largely automated computational tool.

  19. Topology analysis of social networks extracted from literature.

    Science.gov (United States)

    Waumans, Michaël C; Nicodème, Thibaut; Bersini, Hugues

    2015-01-01

    In a world where complex networks are an increasingly important part of science, it is interesting to question how the new reading of social realities they provide applies to our cultural background and in particular, popular culture. Are authors of successful novels able to reproduce social networks faithful to the ones found in reality? Is there any common trend connecting an author's oeuvre, or a genre of fiction? Such an analysis could provide new insight on how we, as a culture, perceive human interactions and consume media. The purpose of the work presented in this paper is to define the signature of a novel's story based on the topological analysis of its social network of characters. For this purpose, an automated tool was built that analyses the dialogs in novels, identifies characters and computes their relationships in a time-dependent manner in order to assess the network's evolution over the course of the story.

  20. Topology analysis of social networks extracted from literature.

    Directory of Open Access Journals (Sweden)

    Michaël C Waumans

    Full Text Available In a world where complex networks are an increasingly important part of science, it is interesting to question how the new reading of social realities they provide applies to our cultural background and in particular, popular culture. Are authors of successful novels able to reproduce social networks faithful to the ones found in reality? Is there any common trend connecting an author's oeuvre, or a genre of fiction? Such an analysis could provide new insight on how we, as a culture, perceive human interactions and consume media. The purpose of the work presented in this paper is to define the signature of a novel's story based on the topological analysis of its social network of characters. For this purpose, an automated tool was built that analyses the dialogs in novels, identifies characters and computes their relationships in a time-dependent manner in order to assess the network's evolution over the course of the story.

  1. On the Optimality of Trust Network Analysis with Subjective Logic

    Directory of Open Access Journals (Sweden)

    PARK, Y.

    2014-08-01

    Full Text Available Building and measuring trust is one of crucial aspects in e-commerce, social networking and computer security. Trust networks are widely used to formalize trust relationships and to conduct formal reasoning of trust values. Diverse trust network analysis methods have been developed so far and one of the most widely used schemes is TNA-SL (Trust Network Analysis with Subjective Logic. Recent papers claimed that TNA-SL always finds the optimal solution by producing the least uncertainty. In this paper, we present some counter-examples, which imply that TNA-SL is not an optimal algorithm. Furthermore, we present a probabilistic algorithm in edge splitting to minimize uncertainty.

  2. A New Approach for the Stability Analysis of Wave Networks

    Directory of Open Access Journals (Sweden)

    Ya Xuan Zhang

    2014-01-01

    Full Text Available We introduce a new approach to investigate the stability of controlled tree-shaped wave networks and subtrees of complex wave networks. It is motivated by regarding the network as branching out from a single edge. We present the recursive relations of the Laplacian transforms of adjacent edges of the system in its branching order, which form the characteristic equation. In the stability analysis, we estimate the infimums of the recursive expressions in the inverse order based on the spectral analysis. It is a feasible way to check whether the system is exponentially stable under any control strategy or parameter choice. As an application we design the control law and study the stability of a 12-edge tree-shaped wave network.

  3. Ego Network Analysis of Upper Division Physics Student Survey

    Science.gov (United States)

    Brewe, Eric

    2017-01-01

    We present the analysis of student networks derived from a survey of upper division physics students. Ego networks focus on the connections that center on one person (the ego). The ego networks in this talk come from a survey that is part of an overall project focused on understanding student retention and persistence. The theory underlying this work is that social and academic integration are essential components to supporting students continued enrollment and ultimately graduation. This work uses network analysis as a way to investigate the role of social and academic interactions in retention and persistence decisions. We focus on student interactions with peers, on mentoring interactions with physics department faculty, and on engagement in physics groups and how they influence persistence. Our results, which are preliminary, will help frame the ongoing research project and identify ways in which departments can support students. This work supported by NSF grant #PHY 1344247.

  4. Demonstration of the cell clonality in canine hematopoietic tumors by X-chromosome inactivation pattern analysis.

    Science.gov (United States)

    Mochizuki, H; Goto-Koshino, Y; Takahashi, M; Fujino, Y; Ohno, K; Tsujimoto, H

    2015-01-01

    X-chromosome inactivation pattern (XCIP) analysis has been widely used to assess cell clonality in various types of human neoplasms. In this study, a polymerase chain reaction-based canine XCIP analysis of the androgen receptor (AR) gene was applied for the assessment of cell clonality in canine hematopoietic tumors. This XCIP analysis is based on the polymorphic CAG repeats in the AR gene and the difference of methylation status between active and inactive X chromosomes. We first examined the polymorphisms of 2 CAG tandem repeats in the AR gene in 52 male and 150 female dogs of various breeds. The 2 polymorphic CAG repeats contained 9 to 12 and 10 to 14 CAGs in the first and second CAG repeats, respectively. Of the 150 female dogs, 74 (49.3%) were heterozygous for the first and/or second polymorphic CAG tandem repeats, indicating the utility of XCIP analysis in these dogs. Canine XCIP analysis was then applied to clinical samples from female dogs with canine high-grade lymphoma, chronic myelogenous leukemia, acute myelogenous leukemia, and benign lymph node hyperplasia. Of 10 lymphoma cell samples, 9 (90%) showed skewed XCIPs, indicating their clonal origins, whereas all the nonneoplastic lymph node samples showed balanced XCIPs. Moreover, bone marrow specimen from a dog with acute myelogenous leukemia and peripheral leukocyte specimens from 2 dogs with chronic myelogenous leukemia showed skewed XCIPs. XCIP analysis was successfully employed to demonstrate the cell clonality of canine hematopoietic tumors in this study and will be applicable to evaluate the clonality in various proliferative disorders in dogs. © The Author(s) 2014.

  5. Assessing state-level active living promotion using network analysis.

    Science.gov (United States)

    Buchthal, Opal Vanessa; Taniguchi, Nicole; Iskandar, Livia; Maddock, Jay

    2013-01-01

    Physical inactivity is a growing problem in the United States, one that is being addressed through the development of active living communities. However, active living promotion requires collaboration among organizations that may not have previously shared goals. A network analysis was conducted to assess Hawaii's active living promotion network. Twenty-six organizations playing a significant role in promoting active living in Hawaii were identified and surveyed about their frequency of contact, level of collaboration, and funding flow with other agencies. A communication network was identified linking all agencies. This network had many long pathways, impeding information flow. The Department of Health (DOH) and the State Nutrition and Physical Activity Coalition (NPAC) were central nodes, but DOH connected state agencies while NPAC linked county and voluntary organizations. Within the network, information sharing was common, but collaboration and formal partnership were low. Linkages between county and state agencies, between counties, and between state agencies with different core agendas were particularly low. Results suggest that in the early stages of development, active living networks may be divided by geography and core missions, requiring work to bridge these divides. Network mapping appears helpful in identifying areas for network development.

  6. Vicus: Exploiting local structures to improve network-based analysis of biological data.

    Science.gov (United States)

    Wang, Bo; Huang, Lin; Zhu, Yuke; Kundaje, Anshul; Batzoglou, Serafim; Goldenberg, Anna

    2017-10-01

    Biological networks entail important topological features and patterns critical to understanding interactions within complicated biological systems. Despite a great progress in understanding their structure, much more can be done to improve our inference and network analysis. Spectral methods play a key role in many network-based applications. Fundamental to spectral methods is the Laplacian, a matrix that captures the global structure of the network. Unfortunately, the Laplacian does not take into account intricacies of the network's local structure and is sensitive to noise in the network. These two properties are fundamental to biological networks and cannot be ignored. We propose an alternative matrix Vicus. The Vicus matrix captures the local neighborhood structure of the network and thus is more effective at modeling biological interactions. We demonstrate the advantages of Vicus in the context of spectral methods by extensive empirical benchmarking on tasks such as single cell dimensionality reduction, protein module discovery and ranking genes for cancer subtyping. Our experiments show that using Vicus, spectral methods result in more accurate and robust performance in all of these tasks.

  7. Network similarity and statistical analysis of earthquake seismic data

    Science.gov (United States)

    Deyasi, Krishanu; Chakraborty, Abhijit; Banerjee, Anirban

    2017-09-01

    We study the structural similarity of earthquake networks constructed from seismic catalogs of different geographical regions. A hierarchical clustering of underlying undirected earthquake networks is shown using Jensen-Shannon divergence in graph spectra. The directed nature of links indicates that each earthquake network is strongly connected, which motivates us to study the directed version statistically. Our statistical analysis of each earthquake region identifies the hub regions. We calculate the conditional probability of the forthcoming occurrences of earthquakes in each region. The conditional probability of each event has been compared with their stationary distribution.

  8. Google matrix analysis of C.elegans neural network

    Science.gov (United States)

    Kandiah, V.; Shepelyansky, D. L.

    2014-05-01

    We study the structural properties of the neural network of the C.elegans (worm) from a directed graph point of view. The Google matrix analysis is used to characterize the neuron connectivity structure and node classifications are discussed and compared with physiological properties of the cells. Our results are obtained by a proper definition of neural directed network and subsequent eigenvector analysis which recovers some results of previous studies. Our analysis highlights particular sets of important neurons constituting the core of the neural system. The applications of PageRank, CheiRank and ImpactRank to characterization of interdependency of neurons are discussed.

  9. Network analysis of oyster transcriptome revealed a cascade of cellular responses during recovery after heat shock.

    Directory of Open Access Journals (Sweden)

    Lingling Zhang

    Full Text Available Oysters, as a major group of marine bivalves, can tolerate a wide range of natural and anthropogenic stressors including heat stress. Recent studies have shown that oysters pretreated with heat shock can result in induced heat tolerance. A systematic study of cellular recovery from heat shock may provide insights into the mechanism of acquired thermal tolerance. In this study, we performed the first network analysis of oyster transcriptome by reanalyzing microarray data from a previous study. Network analysis revealed a cascade of cellular responses during oyster recovery after heat shock and identified responsive gene modules and key genes. Our study demonstrates the power of network analysis in a non-model organism with poor gene annotations, which can lead to new discoveries that go beyond the focus on individual genes.

  10. A Business Case Analysis of Pre-Positioned Expeditionary Assistance Kit Joint Capability Technology Demonstration

    Science.gov (United States)

    2013-12-01

    Satellite Network in five minutes and generate 100-meter wireless clouds • Four foldable 10-foot-by-10-foot solar panel tarps that generate 800 watts...of power from sunlight or a wind turbine (same solar panel tarps used in NEST Raptor Solar Light Trailer) • Global Positioning System (GPS) devices...Technologies Raptor Solar Light Trailer ...................................................................................... 15 4. Hastily Formed Network

  11. Artificial Neural Network Analysis of Xinhui Pericarpium Citri ...

    African Journals Online (AJOL)

    Artificial Neural Network Analysis of Xinhui Pericarpium ... Results: The Root Mean Square (RMS) error of GRNN was 0.22, less than the error MLFN at different .... Statistical analysis. To quantify the results of the model, the judgments generated by ANN model were presented as "1" or "0". "1" represents the characteristics of ...

  12. Using social network analysis to understand actor participation and ...

    African Journals Online (AJOL)

    Sustainable management of wetland is complex due competing interests and require the participation of different actors. However, there is little attention on systematic analysis of actor participation in wetland management. This paper uses Social Network Analysis (SNA) approach to analyse how actors with different ...

  13. Dynamic network-based epistasis analysis: Boolean examples

    Directory of Open Access Journals (Sweden)

    Eugenio eAzpeitia

    2011-12-01

    Full Text Available In this review we focus on how the hierarchical and single-path assumptions of epistasis analysis can bias the topologies of gene interactions infered. This has been acknowledged in several previous papers and reviews, but here we emphasize the critical importance of dynamic analyses, and specifically illustrate the use of Boolean network models. Epistasis in a broad sense refers to gene interactions, however, as originally proposed by Bateson (herein, classical epistasis, defined as the blocking of a particular allelic effect due to the effect of another allele at a different locus. Classical epistasis analysis has proven powerful and useful, allowing researchers to infer and assign directionality to gene interactions. As larger data sets are becoming available, the analysis of classical epistasis is being complemented with computer science tools and system biology approaches. We show that when the hierarchical and single-path assumptions are not met in classical epistasis analysis, the access to relevant information and the correct gene interaction topologies are hindered, and it becomes necessary to consider the temporal dynamics of gene interactions. The use of dynamical networks can overcome these limitations. We particularly focus on the use of Boolean networks that, like classical epistasis analysis, relies on logical formalisms, and hence can complement classical epistasis analysis and relax its assumptions. We develop a couple of theoretical examples and analyze them from a dynamic Boolean network model perspective. Boolean networks could help to guide additional experiments and discern among alternative regulatory schemes that would be impossible or difficult to infer without the elimination of these assumption from the classical epistasis analysis. We also use examples from the literature to show how a Boolean network-based approach has resolved ambiguities and guided epistasis analysis. Our review complements previous accounts, not

  14. Category Theoretic Analysis of Hierarchical Protein Materials and Social Networks

    Science.gov (United States)

    Spivak, David I.; Giesa, Tristan; Wood, Elizabeth; Buehler, Markus J.

    2011-01-01

    Materials in biology span all the scales from Angstroms to meters and typically consist of complex hierarchical assemblies of simple building blocks. Here we describe an application of category theory to describe structural and resulting functional properties of biological protein materials by developing so-called ologs. An olog is like a “concept web” or “semantic network” except that it follows a rigorous mathematical formulation based on category theory. This key difference ensures that an olog is unambiguous, highly adaptable to evolution and change, and suitable for sharing concepts with other olog. We consider simple cases of beta-helical and amyloid-like protein filaments subjected to axial extension and develop an olog representation of their structural and resulting mechanical properties. We also construct a representation of a social network in which people send text-messages to their nearest neighbors and act as a team to perform a task. We show that the olog for the protein and the olog for the social network feature identical category-theoretic representations, and we proceed to precisely explicate the analogy or isomorphism between them. The examples presented here demonstrate that the intrinsic nature of a complex system, which in particular includes a precise relationship between structure and function at different hierarchical levels, can be effectively represented by an olog. This, in turn, allows for comparative studies between disparate materials or fields of application, and results in novel approaches to derive functionality in the design of de novo hierarchical systems. We discuss opportunities and challenges associated with the description of complex biological materials by using ologs as a powerful tool for analysis and design in the context of materiomics, and we present the potential impact of this approach for engineering, life sciences, and medicine. PMID:21931622

  15. Artificial neural network for on-site quantitative analysis of soils using laser induced breakdown spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    El Haddad, J. [Univ. Bordeaux, LOMA, UMR 5798, F-33400 Talence (France); CNRS, LOMA, UMR 5798, F-33400 Talence (France); Villot-Kadri, M.; Ismaël, A.; Gallou, G. [IVEA Solution, Centre Scientifique d' Orsay, Bât 503, 91400 Orsay (France); Michel, K.; Bruyère, D.; Laperche, V. [BRGM, Service Métrologie, Monitoring et Analyse, 3 avenue Claude Guillemin, B.P 36009, 45060 Orléans Cedex (France); Canioni, L. [Univ. Bordeaux, LOMA, UMR 5798, F-33400 Talence (France); CNRS, LOMA, UMR 5798, F-33400 Talence (France); Bousquet, B., E-mail: bruno.bousquet@u-bordeaux1.fr [Univ. Bordeaux, LOMA, UMR 5798, F-33400 Talence (France); CNRS, LOMA, UMR 5798, F-33400 Talence (France)

    2013-01-01

    Nowadays, due to environmental concerns, fast on-site quantitative analyses of soils are required. Laser induced breakdown spectroscopy is a serious candidate to address this challenge and is especially well suited for multi-elemental analysis of heavy metals. However, saturation and matrix effects prevent from a simple treatment of the LIBS data, namely through a regular calibration curve. This paper details the limits of this approach and consequently emphasizes the advantage of using artificial neural networks well suited for non-linear and multi-variate calibration. This advanced method of data analysis is evaluated in the case of real soil samples and on-site LIBS measurements. The selection of the LIBS data as input data of the network is particularly detailed and finally, resulting errors of prediction lower than 20% for aluminum, calcium, copper and iron demonstrate the good efficiency of the artificial neural networks for on-site quantitative LIBS of soils. - Highlights: ► We perform on-site quantitative LIBS analysis of soil samples. ► We demonstrate that univariate analysis is not convenient. ► We exploit artificial neural networks for LIBS analysis. ► Spectral lines other than the ones from the analyte must be introduced.

  16. Experimental demonstration of an OpenFlow based software-defined optical network employing packet, fixed and flexible DWDM grid technologies on an international multi-domain testbed.

    Science.gov (United States)

    Channegowda, M; Nejabati, R; Rashidi Fard, M; Peng, S; Amaya, N; Zervas, G; Simeonidou, D; Vilalta, R; Casellas, R; Martínez, R; Muñoz, R; Liu, L; Tsuritani, T; Morita, I; Autenrieth, A; Elbers, J P; Kostecki, P; Kaczmarek, P

    2013-03-11

    Software defined networking (SDN) and flexible grid optical transport technology are two key technologies that allow network operators to customize their infrastructure based on application requirements and therefore minimizing the extra capital and operational costs required for hosting new applications. In this paper, for the first time we report on design, implementation & demonstration of a novel OpenFlow based SDN unified control plane allowing seamless operation across heterogeneous state-of-the-art optical and packet transport domains. We verify and experimentally evaluate OpenFlow protocol extensions for flexible DWDM grid transport technology along with its integration with fixed DWDM grid and layer-2 packet switching.

  17. A Demonstration of Advanced Safety Analysis Tools and Methods Applied to Large Break LOCA and Fuel Analysis for PWRs

    Energy Technology Data Exchange (ETDEWEB)

    Szilard, Ronaldo Henriques [Idaho National Laboratory; Smith, Curtis Lee [Idaho National Laboratory; Martineau, Richard Charles [Idaho National Laboratory

    2016-03-01

    The U.S. Nuclear Regulatory Commission (NRC) is currently proposing a rulemaking designated as 10 CFR 50.46c to revise the loss-of-coolant accident (LOCA)/emergency core cooling system acceptance criteria to include the effects of higher burnup on fuel/cladding performance. We propose a demonstration problem of a representative four-loop PWR plant to study the impact of this new rule in the US nuclear fleet. Within the scope of evaluation for the 10 CFR 50.46c rule, aspects of safety, operations, and economics are considered in the industry application demonstration presented in this paper. An advanced safety analysis approach is used, by integrating the probabilistic element with deterministic methods for LOCA analysis, a novel approach to solving these types of multi-physics, multi-scale problems.

  18. Clinical phenotyping in selected national networks: demonstrating the need for high-throughput, portable, and computational methods.

    Science.gov (United States)

    Richesson, Rachel L; Sun, Jimeng; Pathak, Jyotishman; Kho, Abel N; Denny, Joshua C

    2016-07-01

    The combination of phenomic data from electronic health records (EHR) and clinical data repositories with dense biological data has enabled genomic and pharmacogenomic discovery, a first step toward precision medicine. Computational methods for the identification of clinical phenotypes from EHR data will advance our understanding of disease risk and drug response, and support the practice of precision medicine on a national scale. Based on our experience within three national research networks, we summarize the broad approaches to clinical phenotyping and highlight the important role of these networks in the progression of high-throughput phenotyping and precision medicine. We provide supporting literature in the form of a non-systematic review. The practice of clinical phenotyping is evolving to meet the growing demand for scalable, portable, and data driven methods and tools. The resources required for traditional phenotyping algorithms from expert defined rules are significant. In contrast, machine learning approaches that rely on data patterns will require fewer clinical domain experts and resources. Machine learning approaches that generate phenotype definitions from patient features and clinical profiles will result in truly computational phenotypes, derived from data rather than experts. Research networks and phenotype developers should cooperate to develop methods, collaboration platforms, and data standards that will enable computational phenotyping and truly modernize biomedical research and precision medicine. Copyright © 2016 Elsevier B.V. All rights reserved.

  19. Bank-firm credit network in Japan: an analysis of a bipartite network.

    Science.gov (United States)

    Marotta, Luca; Miccichè, Salvatore; Fujiwara, Yoshi; Iyetomi, Hiroshi; Aoyama, Hideaki; Gallegati, Mauro; Mantegna, Rosario N

    2015-01-01

    We investigate the networked nature of the Japanese credit market. Our investigation is performed with tools of network science. In our investigation we perform community detection with an algorithm which is identifying communities composed of both banks and firms. We show that the communities obtained by directly working on the bipartite network carry information about the networked nature of the Japanese credit market. Our analysis is performed for each calendar year during the time period from 1980 to 2011. To investigate the time evolution of the networked structure of the credit market we introduce a new statistical method to track the time evolution of detected communities. We then characterize the time evolution of communities by detecting for each time evolving set of communities the over-expression of attributes of firms and banks. Specifically, we consider as attributes the economic sector and the geographical location of firms and the type of banks. In our 32-year-long analysis we detect a persistence of the over-expression of attributes of communities of banks and firms together with a slow dynamic of changes from some specific attributes to new ones. Our empirical observations show that the credit market in Japan is a networked market where the type of banks, geographical location of firms and banks, and economic sector of the firm play a role in shaping the credit relationships between banks and firms.

  20. Characterization of Antimicrobial Resistance Dissemination across Plasmid Communities Classified by Network Analysis

    Directory of Open Access Journals (Sweden)

    Akifumi Yamashita

    2014-04-01

    Full Text Available The global clustering of gene families through network analysis has been demonstrated in whole genome, plasmid, and microbiome analyses. In this study, we carried out a plasmidome network analysis of all available complete bacterial plasmids to determine plasmid associations. A blastp clustering search at 100% aa identity cut-off and sharing at least one gene between plasmids, followed by a multilevel community network analysis revealed that a surprisingly large number of the plasmids were connected by one largest connected component (LCC, with dozens of community sub-groupings. The LCC consisted mainly of Bacilli and Gammaproteobacteria plasmids. Intriguingly, horizontal gene transfer (HGT was noted between different phyla (i.e., Staphylococcus and Pasteurellaceae, suggesting that Pasteurellaceae can acquire antimicrobial resistance (AMR genes from closely contacting Staphylococcus spp., which produce the external supplement of V-factor (NAD. Such community network analysis facilitate displaying possible recent HGTs like a class 1 integron, str and tet resistance markers between communities. Furthermore, the distribution of the Inc replicon type and AMR genes, such as the extended-spectrum ß-lactamase (ESBL CTX-M or the carbapenemases KPC NDM-1, implies that such genes generally circulate within limited communities belonging to typical bacterial genera. Thus, plasmidome network analysis provides a remarkable discriminatory power for plasmid-related HGT and evolution.

  1. Cluster Analysis Based on Bipartite Network

    Directory of Open Access Journals (Sweden)

    Dawei Zhang

    2014-01-01

    Full Text Available Clustering data has a wide range of applications and has attracted considerable attention in data mining and artificial intelligence. However it is difficult to find a set of clusters that best fits natural partitions without any class information. In this paper, a method for detecting the optimal cluster number is proposed. The optimal cluster number can be obtained by the proposal, while partitioning the data into clusters by FCM (Fuzzy c-means algorithm. It overcomes the drawback of FCM algorithm which needs to define the cluster number c in advance. The method works by converting the fuzzy cluster result into a weighted bipartite network and then the optimal cluster number can be detected by the improved bipartite modularity. The experimental results on artificial and real data sets show the validity of the proposed method.

  2. Intruder Activity Analysis under Unreliable Sensor Networks

    Energy Technology Data Exchange (ETDEWEB)

    Tae-Sic Yoo; Humberto E. Garcia

    2007-09-01

    This paper addresses the problem of counting intruder activities within a monitored domain by a sensor network. The deployed sensors are unreliable. We characterize imperfect sensors with misdetection and false-alarm probabilities. We model intruder activities with Markov Chains. A set of Hidden Markov Models (HMM) models the imperfect sensors and intruder activities to be monitored. A novel sequential change detection/isolation algorithm is developed to detect and isolate a change from an HMM representing no intruder activity to another HMM representing some intruder activities. Procedures for estimating the entry time and the trace of intruder activities are developed. A domain monitoring example is given to illustrate the presented concepts and computational procedures.

  3. A topological analysis of scientific coauthorship networks

    Science.gov (United States)

    Cardillo, Alessio; Scellato, Salvatore; Latora, Vito

    2006-12-01

    We study coauthorship networks based on the preprints submitted to the Los Alamos cond-mat database during the period 2000-2005. In our approach two scientists are considered connected if they have coauthored one or more cond-mat preprints together in the same year. We focus on the characterization of the structural properties of the derived graphs and on the time evolution of such properties. The results show that the cond-mat community has grown over the last six years. This is witnessed by an improvement in the connectivity properties of coauthorship graphs over the years, as confirmed by an increasing size of the largest connected component, of the global efficiency and of the clustering coefficient. We have also found that the graphs are characterized by long-tailed degree and betweenness distributions, assortative degree-degree correlations, and a power-law dependence of the clustering coefficient on the node degree.

  4. A performance analysis of DS-CDMA and SCPC VSAT networks

    Science.gov (United States)

    Hayes, David P.; Ha, Tri T.

    1990-01-01

    Spread-spectrum and single-channel-per-carrier (SCPC) transmission techniques work well in very small aperture terminal (VSAT) networks for multiple-access purposes while allowing the earth station antennas to remain small. Direct-sequence code-division multiple-access (DS-CDMA) is the simplest spread-spectrum technique to use in a VSAT network since a frequency synthesizer is not required for each terminal. An examination is made of the DS-CDMA and SCPC Ku-band VSAT satellite systems for low-density (64-kb/s or less) communications. A method for improving the standardf link analysis of DS-CDMA satellite-switched networks by including certain losses is developed. The performance of 50-channel full mesh and star network architectures is analyzed. The selection of operating conditions producing optimum performance is demonstrated.

  5. Glycosylation Network Analysis Toolbox: a MATLAB-based environment for systems glycobiology

    Science.gov (United States)

    Liu, Gang; Neelamegham, Sriram

    2013-01-01

    Summary: Systems glycobiology studies the interaction of various pathways that regulate glycan biosynthesis and function. Software tools for the construction and analysis of such pathways are not yet available. We present GNAT, a platform-independent, user-extensible MATLAB-based toolbox that provides an integrated computational environment to construct, manipulate and simulate glycans and their networks. It enables integration of XML-based glycan structure data into SBML (Systems Biology Markup Language) files that describe glycosylation reaction networks. Curation and manipulation of networks is facilitated using class definitions and glycomics database query tools. High quality visualization of networks and their steady-state and dynamic simulation are also supported. Availability: The software package including source code, help documentation and demonstrations are available at http://sourceforge.net/projects/gnatmatlab/files/. Contact: neel@buffalo.edu or gangliu@buffalo.edu PMID:23230149

  6. Dim Networks: The Utility of Social Network Analysis for Illuminating Partner Security Force Networks

    Science.gov (United States)

    2015-12-01

    Eigenvector centrality ......................................................88 xii THIS PAGE INTENTIONALLY LEFT BLANK xiii LIST OF ACRONYMS AND...should be engaged. This determination will be based on simple SNA centrality measures, total degree,9 betweenness,10 closeness,11 and Eigenvector ...11 Closeness centrality measures how close each node is to all the other nodes in a network by their path distance. 12 Eigenvector centrality

  7. Mobile networks for biometric data analysis

    CERN Document Server

    Madrid, Natividad; Seepold, Ralf; Orcioni, Simone

    2016-01-01

    This book showcases new and innovative approaches to biometric data capture and analysis, focusing especially on those that are characterized by non-intrusiveness, reliable prediction algorithms, and high user acceptance. It comprises the peer-reviewed papers from the international workshop on the subject that was held in Ancona, Italy, in October 2014 and featured sessions on ICT for health care, biometric data in automotive and home applications, embedded systems for biometric data analysis, biometric data analysis: EMG and ECG, and ICT for gait analysis. The background to the book is the challenge posed by the prevention and treatment of common, widespread chronic diseases in modern, aging societies. Capture of biometric data is a cornerstone for any analysis and treatment strategy. The latest advances in sensor technology allow accurate data measurement in a non-intrusive way, and in many cases it is necessary to provide online monitoring and real-time data capturing to support a patient’s prevention pl...

  8. Protocol design and analysis for cooperative wireless networks

    CERN Document Server

    Song, Wei; Jin, A-Long

    2017-01-01

    This book focuses on the design and analysis of protocols for cooperative wireless networks, especially at the medium access control (MAC) layer and for crosslayer design between the MAC layer and the physical layer. It highlights two main points that are often neglected in other books: energy-efficiency and spatial random distribution of wireless devices. Effective methods in stochastic geometry for the design and analysis of wireless networks are also explored. After providing a comprehensive review of existing studies in the literature, the authors point out the challenges that are worth further investigation. Then, they introduce several novel solutions for cooperative wireless network protocols that reduce energy consumption and address spatial random distribution of wireless nodes. For each solution, the book offers a clear system model and problem formulation, details of the proposed cooperative schemes, comprehensive performance analysis, and extensive numerical and simulation results that validate th...

  9. Hydraulic Analysis of Water Distribution Network Using Shuffled Complex Evolution

    Directory of Open Access Journals (Sweden)

    Naser Moosavian

    2014-01-01

    Full Text Available Hydraulic analysis of water distribution networks is an important problem in civil engineering. A widely used approach in steady-state analysis of water distribution networks is the global gradient algorithm (GGA. However, when the GGA is applied to solve these networks, zero flows cause a computation failure. On the other hand, there are different mathematical formulations for hydraulic analysis under pressure-driven demand and leakage simulation. This paper introduces an optimization model for the hydraulic analysis of water distribution networks using a metaheuristic method called shuffled complex evolution (SCE algorithm. In this method, applying if-then rules in the optimization model is a simple way in handling pressure-driven demand and leakage simulation, and there is no need for an initial solution vector which must be chosen carefully in many other procedures if numerical convergence is to be achieved. The overall results indicate that the proposed method has the capability of handling various pipe networks problems without changing in model or mathematical formulation. Application of SCE in optimization model can lead to accurate solutions in pipes with zero flows. Finally, it can be concluded that the proposed method is a suitable alternative optimizer challenging other methods especially in terms of accuracy.

  10. Hybrid modeling and empirical analysis of automobile supply chain network

    Science.gov (United States)

    Sun, Jun-yan; Tang, Jian-ming; Fu, Wei-ping; Wu, Bing-ying

    2017-05-01

    Based on the connection mechanism of nodes which automatically select upstream and downstream agents, a simulation model for dynamic evolutionary process of consumer-driven automobile supply chain is established by integrating ABM and discrete modeling in the GIS-based map. Firstly, the rationality is proved by analyzing the consistency of sales and changes in various agent parameters between the simulation model and a real automobile supply chain. Second, through complex network theory, hierarchical structures of the model and relationships of networks at different levels are analyzed to calculate various characteristic parameters such as mean distance, mean clustering coefficients, and degree distributions. By doing so, it verifies that the model is a typical scale-free network and small-world network. Finally, the motion law of this model is analyzed from the perspective of complex self-adaptive systems. The chaotic state of the simulation system is verified, which suggests that this system has typical nonlinear characteristics. This model not only macroscopically illustrates the dynamic evolution of complex networks of automobile supply chain but also microcosmically reflects the business process of each agent. Moreover, the model construction and simulation of the system by means of combining CAS theory and complex networks supplies a novel method for supply chain analysis, as well as theory bases and experience for supply chain analysis of auto companies.

  11. Simulated, Emulated, and Physical Investigative Analysis (SEPIA) of networked systems.

    Energy Technology Data Exchange (ETDEWEB)

    Burton, David P.; Van Leeuwen, Brian P.; McDonald, Michael James; Onunkwo, Uzoma A.; Tarman, Thomas David; Urias, Vincent E.

    2009-09-01

    This report describes recent progress made in developing and utilizing hybrid Simulated, Emulated, and Physical Investigative Analysis (SEPIA) environments. Many organizations require advanced tools to analyze their information system's security, reliability, and resilience against cyber attack. Today's security analysis utilize real systems such as computers, network routers and other network equipment, computer emulations (e.g., virtual machines) and simulation models separately to analyze interplay between threats and safeguards. In contrast, this work developed new methods to combine these three approaches to provide integrated hybrid SEPIA environments. Our SEPIA environments enable an analyst to rapidly configure hybrid environments to pass network traffic and perform, from the outside, like real networks. This provides higher fidelity representations of key network nodes while still leveraging the scalability and cost advantages of simulation tools. The result is to rapidly produce large yet relatively low-cost multi-fidelity SEPIA networks of computers and routers that let analysts quickly investigate threats and test protection approaches.

  12. Security analysis of quantum key distribution on passive optical networks.

    Science.gov (United States)

    Lim, Kyongchun; Ko, Heasin; Suh, Changho; Rhee, June-Koo Kevin

    2017-05-15

    Needs for providing security to end users have brought installation of quantum key distribution (QKD) in one-to-many access networks such as passive optical networks. In the networks, a presence of optical power splitters makes issues for secure key rate more important. However, researches for QKD in access networks have mainly focused on implementation issues rather than protocol development for key rate enhancement. Since secure key rate is theoretically limited by a protocol, researches without protocol development cannot overcome the limit of secure key rate given by a protocol. This brings need of researches for protocol development. In this paper, we provide a new approach which provides secure key rate enhancement over the conventional protocol. Specifically, we propose the secure key rate formula in a passive optical network by extending the secure key rate formula based on the decoy-state BB84 protocol. For a passive optical network, we provide a way that incorporates cooperation across end users. Then, we show that the way can mitigate a photon number splitting (PNS) attack which is crucial in an well known decoy BB84 protocol. Especially, the proposed scheme enables multi-photon states to serve as secure keys unlike the conventional decoy BB84 protocol. Numerical simulations demonstrate that our proposed scheme outperforms the decoy BB84 protocol in secure key rate.

  13. Temporal analysis of social networks using three-way DEDICOM.

    Energy Technology Data Exchange (ETDEWEB)

    Bader, Brett William; Harshman, Richard A. (University of Ontario, London, Ontario, Canada); Kolda, Tamara Gibson (Sandia National Laboratories, Livermore, CA)

    2006-06-01

    DEDICOM is an algebraic model for analyzing intrinsically asymmetric relationships, such as the balance of trade among nations or the flow of information among organizations or individuals. It provides information on latent components in the data that can be regarded as ''properties'' or ''aspects'' of the objects, and it finds a few patterns that can be combined to describe many relationships among these components. When we apply this technique to adjacency matrices arising from directed graphs, we obtain a smaller graph that gives an idealized description of its patterns. Three-way DEDICOM is a higher-order extension of the model that has certain uniqueness properties. It allows for a third mode of the data, such as time, and permits the analysis of semantic graphs. We present an improved algorithm for computing three-way DEDICOM on sparse data and demonstrate it by applying it to the adjacency tensor of a semantic graph with time-labeled edges. Our application uses the Enron email corpus, from which we construct a semantic graph corresponding to email exchanges among Enron personnel over a series of 44 months. Meaningful patterns are recovered in which the representation of asymmetries adds insight into the social networks at Enron.

  14. Architecture Analysis of an FPGA-Based Hopfield Neural Network

    Directory of Open Access Journals (Sweden)

    Miguel Angelo de Abreu de Sousa

    2014-01-01

    Full Text Available Interconnections between electronic circuits and neural computation have been a strongly researched topic in the machine learning field in order to approach several practical requirements, including decreasing training and operation times in high performance applications and reducing cost, size, and energy consumption for autonomous or embedded developments. Field programmable gate array (FPGA hardware shows some inherent features typically associated with neural networks, such as, parallel processing, modular executions, and dynamic adaptation, and works on different types of FPGA-based neural networks were presented in recent years. This paper aims to address different aspects of architectural characteristics analysis on a Hopfield Neural Network implemented in FPGA, such as maximum operating frequency and chip-area occupancy according to the network capacity. Also, the FPGA implementation methodology, which does not employ multipliers in the architecture developed for the Hopfield neural model, is presented, in detail.

  15. Center of attention: A network text analysis of American Sniper

    Directory of Open Access Journals (Sweden)

    Starling Hunter

    2016-06-01

    Full Text Available Network Text Analysis (NTA is a term used to describe a variety of software - supported methods for modeling texts as networks of concepts. In this study we apply NTA to the screenplay of American Sniper, an Academy Award nominee for Best Adapted Screenplay in 2014. Specifically, we est ablish prior expectations as to the key themes associated with war films. We then empirically test whether words associated with the most influentially - positioned nodes in the network signify themes common to the war - film genre. As predicted, we find tha t words and concepts associated with the least constrained nodes in the text network were significantly more likely to be associated with the war genre and significantly less likely to be associated with genres to which the film did not belong.

  16. Social network analysis: foundations and frontiers on advantage.

    Science.gov (United States)

    Burt, Ronald S; Kilduff, Martin; Tasselli, Stefano

    2013-01-01

    We provide an overview of social network analysis focusing on network advantage as a lens that touches on much of the area. For reasons of good data and abundant research, we draw heavily on studies of people in organizations. Advantage is traced to network structure as a proxy for the distribution of variably sticky information in a population. The network around a person indicates the person's access and control in the distribution. Advantage is a function of information breadth, timing, and arbitrage. Advantage is manifest in higher odds of proposing good ideas, more positive evaluations and recognition, higher compensation, and faster promotions. We discuss frontiers of advantage contingent on personality, cognition, embeddedness, and dynamics.

  17. Nonprofit Organizations in Disaster Response and Management: A Network Analysis

    Directory of Open Access Journals (Sweden)

    NAIM KAPUCU

    2018-01-01

    Full Text Available This paper tracks changes in the national disaster management system with regard to the nonprofit sector by looking at the roles ascribed to nonprofit organizations in the Federal Response Plan (FRP, National Response Plan (NRP, and National Response Framework (NRF. Additionally, the data collected from news reports and organizational after action reports about the inter-organizational interactions of emergency management agencies during the September 11th attacks and Hurricane Katrina are analyzed by using network analysis tools. The findings of the study indicate that there has been an increase in the interactions of the National Voluntary Organizations Active in Disasters (NVOAD network member organizations on par with policy changes in the NRP to involve nonprofit organizations in the national disaster planning process. In addition, those organizations close to the center of the network experienced enhanced communication and resource acquisition allowing them to successfully accomplish their missions, a finding that supports the development of strong network connections.

  18. Stochastic approach to observability analysis in water networks

    Directory of Open Access Journals (Sweden)

    S. Díaz

    2016-07-01

    Full Text Available This work presents an alternative technique to the existing methods for observability analysis (OA in water networks, which is a prior essential step for the implementation of state estimation (SE techniques within such systems. The methodology presented here starts from a known hydraulic state and assumes random gaussian distributions for the uncertainty of some hydraulic variables, which is then propagated to the rest of the system. This process is repeated again to analyze the change in the network uncertainty when metering devices considered as error-free are included, based on which the network observability can be evaluated. The method’s potential is presented in an illustrative example, which shows the additional information that this methodology provides with respect to traditional OA approaches. This proposal allows a better understanding of the network and constitutes a practical tool to prioritize the location of additional meters, thus enhancing the transformation of large urban areas into actual smart cities.

  19. Community evolution mining and analysis in social network

    Science.gov (United States)

    Liu, Hongtao; Tian, Yuan; Liu, Xueyan; Jian, Jie

    2017-03-01

    With the development of digital and network technology, various social platforms emerge. These social platforms have greatly facilitated access to information, attracting more and more users. They use these social platforms every day to work, study and communicate, so every moment social platforms are generating massive amounts of data. These data can often be modeled as complex networks, making large-scale social network analysis possible. In this paper, the existing evolution classification model of community has been improved based on community evolution relationship over time in dynamic social network, and the Evolution-Tree structure is proposed which can show the whole life cycle of the community more clearly. The comparative test result shows that the improved model can excavate the evolution relationship of the community well.

  20. Analysis and Comparison of Typical Models within Distribution Network Design

    DEFF Research Database (Denmark)

    Jørgensen, Hans Jacob; Larsen, Allan; Madsen, Oli B.G.

    This paper investigates the characteristics of typical optimisation models within Distribution Network Design. During the paper fourteen models known from the literature will be thoroughly analysed. Through this analysis a schematic approach to categorisation of distribution network design models...... for educational purposes. Furthermore, the paper can be seen as a practical introduction to network design modelling as well as a being an art manual or recipe when constructing such a model....... are covered in the categorisation include fixed vs. general networks, specialised vs. general nodes, linear vs. nonlinear costs, single vs. multi commodity, uncapacitated vs. capacitated activities, single vs. multi modal and static vs. dynamic. The models examined address both strategic and tactical planning...

  1. Heterogeneous Deployment Analysis for Cost-Effective Mobile Network Evolution

    DEFF Research Database (Denmark)

    Coletti, Claudio

    2013-01-01

    -powered base stations is a promising cost-effective solution to considerably enhance user experience. In such a network topology, which is denoted as heterogeneous deployment, the macro layer is expected to provide wider coverage but lower average data speeds whereas small cells are targeted at extending...... network coverage and boosting network capacity in traffic hot-spot areas. The thesis deals with the deployment of both outdoor small cells and indoor femto cells. Amongst the outdoor solution, particular emphasis is put on relay base stations as backhaul costs can be reduced by utilizing LTE spectrum...... statistical models of deployment areas, the performance analysis is carried out in the form of operator case studies for large-scale deployment scenarios, including realistic macro network layouts and inhomogeneous spatial traffic distributions. Deployment of small cells is performed by means of proposed...

  2. MHC haplotype analysis by artificial neural networks.

    Science.gov (United States)

    Bellgard, M I; Tay, G K; Hiew, H L; Witt, C S; Ketheesan, N; Christiansen, F T; Dawkins, R L

    1998-01-01

    Conventional matching is based on numbers of alleles shared between donor and recipient. This approach, however, ignores the degree of relationship between alleles and haplotypes, and therefore the actual degree of difference. To address this problem, we have compared family members using a block matching technique which reflects differences in genomic sequences. All parents and siblings had been genotyped using conventional MHC typing so that haplotypes could be assigned and relatives could be classified as sharing 0, 1 or 2 haplotypes. We trained an Artificial Neural Network (ANN) with subjects from 6 families (85 comparisons) to distinguish between relatives. Using the outputs of the ANN, we developed a score, the Histocompatibility Index (HI), as a measure of the degree of difference. Subjects from a further 3 families (106 profile comparisons) were tested. The HI score for each comparison was plotted. We show that the HI score is trimodal allowing the definition of three populations corresponding to approximately 0, 1 or 2 haplotype sharing. The means and standard deviations of the three populations were found. As expected, comparisons between family members sharing 2 haplotypes resulted in high HI scores with one exception. More interestingly, this approach distinguishes between the 1 and 0 haplotype groups, with some informative exceptions. This distinction was considered too difficult to attempt visually. The approach provides promise in the quantification of degrees of histocompatibility.

  3. Single-Molecule Analysis beyond Dwell Times: Demonstration and Assessment in and out of Equilibrium.

    Science.gov (United States)

    Schmid, Sonja; Götz, Markus; Hugel, Thorsten

    2016-10-04

    We present a simple and robust technique for extracting kinetic rate models and thermodynamic quantities from single-molecule time traces. Single-molecule analysis of complex kinetic sequences (SMACKS) is a maximum-likelihood approach that resolves all statistically relevant rates and also their uncertainties. This is achieved by optimizing one global kinetic model based on the complete data set while allowing for experimental variations between individual trajectories. In contrast to dwell-time analysis, which is the current standard method, SMACKS includes every experimental data point, not only dwell times. As a result, it works as well for long trajectories as for an equivalent set of short ones. In addition, the previous systematic overestimation of fast over slow rates is solved. We demonstrate the power of SMACKS on the kinetics of the multidomain protein Hsp90 measured by single-molecule Förster resonance energy transfer. Experiments in and out of equilibrium are analyzed and compared to simulations, shedding new light on the role of Hsp90's ATPase function. SMACKS resolves accurate rate models even if states cause indistinguishable signals. Thereby, it pushes the boundaries of single-molecule kinetics beyond those of current methods. Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

  4. Flutter Analysis of a Morphing Wing Technology Demonstrator: Numerical Simulation and Wind Tunnel Testing

    Directory of Open Access Journals (Sweden)

    Andreea KOREANSCHI

    2016-03-01

    Full Text Available As part of a morphing wing technology project, the flutter analysis of two finite element models and the experimental results of a morphing wing demonstrator equipped with aileron are presented. The finite element models are representing a wing section situated at the tip of the wing; the first model corresponds to a traditional aluminium upper surface skin of constant thickness and the second model corresponds to a composite optimized upper surface skin for morphing capabilities. The two models were analyzed for flutter occurrence and effects on the aeroelastic behaviour of the wing were studied by replacing the aluminium upper surface skin of the wing with a specially developed composite version. The morphing wing model with composite upper surface was manufactured and fitted with three accelerometers to record the amplitudes and frequencies during tests at the subsonic wind tunnel facility at the National Research Council. The results presented showed that no aeroelastic phenomenon occurred at the speeds, angles of attack and aileron deflections studied in the wind tunnel and confirmed the prediction of the flutter analysis on the frequencies and modal displacements.

  5. Network analysis of breast cancer progression and reversal using a tree-evolving network algorithm.

    Directory of Open Access Journals (Sweden)

    Ankur P Parikh

    2014-07-01

    Full Text Available The HMT3522 progression series of human breast cells have been used to discover how tissue architecture, microenvironment and signaling molecules affect breast cell growth and behaviors. However, much remains to be elucidated about malignant and phenotypic reversion behaviors of the HMT3522-T4-2 cells of this series. We employed a "pan-cell-state" strategy, and analyzed jointly microarray profiles obtained from different state-specific cell populations from this progression and reversion model of the breast cells using a tree-lineage multi-network inference algorithm, Treegl. We found that different breast cell states contain distinct gene networks. The network specific to non-malignant HMT3522-S1 cells is dominated by genes involved in normal processes, whereas the T4-2-specific network is enriched with cancer-related genes. The networks specific to various conditions of the reverted T4-2 cells are enriched with pathways suggestive of compensatory effects, consistent with clinical data showing patient resistance to anticancer drugs. We validated the findings using an external dataset, and showed that aberrant expression values of certain hubs in the identified networks are associated with poor clinical outcomes. Thus, analysis of various reversion conditions (including non-reverted of HMT3522 cells using Treegl can be a good model system to study drug effects on breast cancer.

  6. A graph-based network-vulnerability analysis system

    Energy Technology Data Exchange (ETDEWEB)

    Swiler, L.P.; Phillips, C. [Sandia National Labs., Albuquerque, NM (United States); Gaylor, T. [3M, Austin, TX (United States). Visual Systems Div.

    1998-01-01

    This report presents a graph-based approach to network vulnerability analysis. The method is flexible, allowing analysis of attacks from both outside and inside the network. It can analyze risks to a specific network asset, or examine the universe of possible consequences following a successful attack. The analysis system requires as input a database of common attacks, broken into atomic steps, specific network configuration and topology information, and an attacker profile. The attack information is matched with the network configuration information and an attacker profile to create a superset attack graph. Nodes identify a stage of attack, for example the class of machines the attacker has accessed and the user privilege level he or she has compromised. The arcs in the attack graph represent attacks or stages of attacks. By assigning probabilities of success on the arcs or costs representing level-of-effort for the attacker, various graph algorithms such as shortest-path algorithms can identify the attack paths with the highest probability of success.

  7. A graph-based system for network-vulnerability analysis

    Energy Technology Data Exchange (ETDEWEB)

    Swiler, L.P.; Phillips, C.

    1998-06-01

    This paper presents a graph-based approach to network vulnerability analysis. The method is flexible, allowing analysis of attacks from both outside and inside the network. It can analyze risks to a specific network asset, or examine the universe of possible consequences following a successful attack. The graph-based tool can identify the set of attack paths that have a high probability of success (or a low effort cost) for the attacker. The system could be used to test the effectiveness of making configuration changes, implementing an intrusion detection system, etc. The analysis system requires as input a database of common attacks, broken into atomic steps, specific network configuration and topology information, and an attacker profile. The attack information is matched with the network configuration information and an attacker profile to create a superset attack graph. Nodes identify a stage of attack, for example the class of machines the attacker has accessed and the user privilege level he or she has compromised. The arcs in the attack graph represent attacks or stages of attacks. By assigning probabilities of success on the arcs or costs representing level-of-effort for the attacker, various graph algorithms such as shortest-path algorithms can identify the attack paths with the highest probability of success.

  8. A graph-based network-vulnerability analysis system

    Energy Technology Data Exchange (ETDEWEB)

    Swiler, L.P.; Phillips, C.; Gaylor, T.

    1998-05-03

    This paper presents a graph based approach to network vulnerability analysis. The method is flexible, allowing analysis of attacks from both outside and inside the network. It can analyze risks to a specific network asset, or examine the universe of possible consequences following a successful attack. The analysis system requires as input a database of common attacks, broken into atomic steps, specific network configuration and topology information, and an attacker profile. The attack information is matched with the network configuration information and an attacker profile to create a superset attack graph. Nodes identify a stage of attack, for example the class of machines the attacker has accessed and the user privilege level he or she has compromised. The arcs in the attack graph represent attacks or stages of attacks. By assigning probabilities of success on the arcs or costs representing level of effort for the attacker, various graph algorithms such as shortest path algorithms can identify the attack paths with the highest probability of success.

  9. Development of Network Analysis and Visualization System for KEGG Pathways

    Directory of Open Access Journals (Sweden)

    Dongmin Seo

    2015-07-01

    Full Text Available Big data refers to informationalization technology for extracting valuable information through the use and analysis of large-scale data and, based on that data, deriving plans for response or predicting changes. With the development of software and devices for next generation sequencing, a vast amount of bioinformatics data has been generated recently. Also, bioinformatics data based big-data technology is rising rapidly as a core technology by the bioinformatician, biologist and big-data scientist. KEGG pathway is bioinformatics data for understanding high-level functions and utilities of the biological system. However, KEGG pathway analysis requires a lot of time and effort because KEGG pathways are high volume and very diverse. In this paper, we proposed a network analysis and visualization system that crawl user interest KEGG pathways, construct a pathway network based on a hierarchy structure of pathways and visualize relations and interactions of pathways by clustering and selecting core pathways from the network. Finally, we construct a pathway network collected by starting with an Alzheimer’s disease pathway and show the results on clustering and selecting core pathways from the pathway network.

  10. Wirelessly Networked Digital Phased Array: Design and Analysis of a 2.4 GHz Demonstrator

    Science.gov (United States)

    2006-09-01

    the system suitable for ballistic missile defense (BMD) early warning radar ( EWR ) applications. In order to validate the WNODAR concepts...the system suitable for ballistic missile defense (BMD) early warning radar ( EWR ) applications. In order to validate the WNODAR concepts...challenges. This research focuses on the Early Warning Radar ( EWR ) aspect. B. THESIS MOTIVATION In years since the end of the Cold War, the

  11. [Social network analysis of animal behavioral ecology: a cross-discipline approach].

    Science.gov (United States)

    Zhang, Peng

    2013-12-01

    Social network analysis (SNA) is a framework used to study the structure of societies. As an umbrella term that encompasses various tools of graph theory and mathematical models to visualize networks, SNA allows researchers to detect and quantify patterns in social networks. Within SNA, individuals are not independent, but are symbiotic or linked with one another in a network. Given its powerful analytical tools, SNA is capable of addressing a range of animal behaviors, and has accordingly become increasingly popular in behavioral ecology studies examining such notions as mate choice/sexual selection, cooperation, information flow and disease transition, behavioral strategies of individuals, fitness consequences of sociality and network stability. Nevertheless, SNA it relatively underutilized among Chinese behavioral ecologists. This study aims at highlighting the benefits of SNA in studying animal behaviors in order to promote greater utilization of SNA within Chinese studies. By first introducing social network theory and demonstrating how social networks can influence individual and collective behaviors, this paper provide a prospective overview of SNA's general utilization for the study of animal behavioral ecology as well as promising directions in the overall use of SNA.

  12. Temporal Sequence of Hemispheric Network Activation during Semantic Processing: A Functional Network Connectivity Analysis

    Science.gov (United States)

    Assaf, Michal; Jagannathan, Kanchana; Calhoun, Vince; Kraut, Michael; Hart, John, Jr.; Pearlson, Godfrey

    2009-01-01

    To explore the temporal sequence of, and the relationship between, the left and right hemispheres (LH and RH) during semantic memory (SM) processing we identified the neural networks involved in the performance of functional MRI semantic object retrieval task (SORT) using group independent component analysis (ICA) in 47 healthy individuals. SORT…

  13. Green pathways: Metabolic network analysis of plant systems.

    Science.gov (United States)

    Dersch, Lisa Maria; Beckers, Veronique; Wittmann, Christoph

    2016-03-01

    Metabolic engineering of plants with enhanced crop yield and value-added compositional traits is particularly challenging as they probably exhibit the highest metabolic network complexity of all living organisms. Therefore, approaches of plant metabolic network analysis, which can provide systems-level understanding of plant physiology, appear valuable as guidance for plant metabolic engineers. Strongly supported by the sequencing of plant genomes, a number of different experimental and computational methods have emerged in recent years to study plant systems at various levels: from heterotrophic cell cultures to autotrophic entire plants. The present review presents a state-of-the-art toolbox for plant metabolic network analysis. Among the described approaches are different in silico modeling techniques, including flux balance analysis, elementary flux mode analysis and kinetic flux profiling, as well as different variants of experiments with plant systems which use radioactive and stable isotopes to determine in vivo plant metabolic fluxes. The fundamental principles of these techniques, the required data input and the obtained flux information are enriched by technical advices, specific to plants. In addition, pioneering and high-impacting findings of plant metabolic network analysis highlight the potential of the field. Copyright © 2015 International Metabolic Engineering Society. Published by Elsevier Inc. All rights reserved.

  14. Bayesian networks for omics data analysis

    NARCIS (Netherlands)

    Gavai, A.K.

    2009-01-01

    This thesis focuses on two aspects of high throughput technologies, i.e. data storage and data analysis, in particular in transcriptomics and metabolomics. Both technologies are part of a research field that is generally called ‘omics’ (or ‘-omics’, with a leading hyphen), which refers to genomics,

  15. [Numerical analysis on network characteristics of communities in herb-pairs network].

    Science.gov (United States)

    Cao, Jia; Xin, Juan-juan; Wang, Yun

    2015-06-01

    To interpret the traditional Chinese medicine (TCM) theory by the network technology, in order to promote the modernization and programming of studies on compatibility of TCMs. In this paper, efforts were made to express the direct interactions between drugs through the herb-pair network, analyze the community characteristics of the network and its relations with blood-Qi theory, and study the expression of blood-Qi theory on the herb-pair network through prescriptions. According to the findings, the herb-pairs network showed a strong community structure characteristics; Each community is composed of a series of herb pairs with close correlations, and either blood efficacy or Qi efficacy but not both of them. Based on that, the 386 single TCM ingredients involved by the herb-pair network were divided into three types of communities: Blood (B) community, Qi (Q) community and uncertain community. According to the statistical results of 262 prescriptions mapped onto the three types of communities, if a prescription contains single herbs of the Q community, the probability that it contains single herbs o the B community is 99.84%; Meanwhile, there are 140 prescriptions containing single herbs of both the Q community and the B community. The result is completely coincident with the TCM Blood-Qi theory that single herbs belong to both Q and B communities or the B community, because Qi regulation leads to blood regulation, but not vice versa. For example, a patient with hemorrhage due to trauma or blood-heat, Qi tonifying prescriptions may aggravate hemorrhage. In this paper, authors found high-recognition macroscopic network numerical characteristics to network data reference for judging rationality of new prescriptions, and proved human blood and Qi relations from the perspective of data analysis.

  16. The Design and Analysis of Virtual Network Configuration for a Wireless Mobile ATM Network

    Science.gov (United States)

    Bush, Stephen F.

    1999-05-01

    This research concentrates on the design and analysis of an algorithm referred to as Virtual Network Configuration (VNC) which uses predicted future states of a system for faster network configuration and management. VNC is applied to the configuration of a wireless mobile ATM network. VNC is built on techniques from parallel discrete event simulation merged with constraints from real-time systems and applied to mobile ATM configuration and handoff. Configuration in a mobile network is a dynamic and continuous process. Factors such as load, distance, capacity and topology are all constantly changing in a mobile environment. The VNC algorithm anticipates configuration changes and speeds the reconfiguration process by pre-computing and caching results. VNC propagates local prediction results throughout the VNC enhanced system. The Global Positioning System is an enabling technology for the use of VNC in mobile networks because it provides location information and accurate time for each node. This research has resulted in well defined structures for the encapsulation of physical processes within Logical Processes and a generic library for enhancing a system with VNC. Enhancing an existing system with VNC is straight forward assuming the existing physical processes do not have side effects. The benefit of prediction is gained at the cost of additional traffic and processing. This research includes an analysis of VNC and suggestions for optimization of the VNC algorithm and its parameters.

  17. Continuous assessment of land mapping accuracy at High Resolution from global networks of atmospheric and field observatories -concept and demonstration

    Science.gov (United States)

    Sicard, Pierre; Martin-lauzer, François-regis

    2017-04-01

    In the context of global climate change and adjustment/resilience policies' design and implementation, there is a need not only i. for environmental monitoring, e.g. through a range of Earth Observations (EO) land "products" but ii. for a precise assessment of uncertainties of the aforesaid information that feed environmental decision-making (to be introduced in the EO metadata) and also iii. for a perfect handing of the thresholds which help translate "environment tolerance limits" to match detected EO changes through ecosystem modelling. Uncertainties' insight means precision and accuracy's knowledge and subsequent ability of setting thresholds for change detection systems. Traditionally, the validation of satellite-derived products has taken the form of intensive field campaigns to sanction the introduction of data processors in Payload Data Ground Segments chains. It is marred by logistical challenges and cost issues, reason why it is complemented by specific surveys at ground-based monitoring sites which can provide near-continuous observations at a high temporal resolution (e.g. RadCalNet). Unfortunately, most of the ground-level monitoring sites, in the number of 100th or 1000th, which are part of wider observation networks (e.g. FLUXNET, NEON, IMAGINES) mainly monitor the state of the atmosphere and the radiation exchange at the surface, which are different to the products derived from EO data. In addition they are "point-based" compared to the EO cover to be obtained from Sentinel-2 or Sentinel-3. Yet, data from these networks, processed by spatial extrapolation models, are well-suited to the bottom-up approach and relevant to the validation of vegetation parameters' consistency (e.g. leaf area index, fraction of absorbed photosynthetically active radiation). Consistency means minimal errors on spatial and temporal gradients of EO products. Test of the procedure for land-cover products' consistency assessment with field measurements delivered by worldwide

  18. Modeling and Analysis of Cellular Networks using Stochastic Geometry: A Tutorial

    KAUST Repository

    Elsawy, Hesham

    2016-11-03

    This paper presents a tutorial on stochastic geometry (SG) based analysis for cellular networks. This tutorial is distinguished by its depth with respect to wireless communication details and its focus on cellular networks. The paper starts by modeling and analyzing the baseband interference in a baseline single-tier downlink cellular network with single antenna base stations and universal frequency reuse. Then, it characterizes signal-to-interference-plus-noise-ratio (SINR) and its related performance metrics. In particular, a unified approach to conduct error probability, outage probability, and transmission rate analysis is presented. Although the main focus of the paper is on cellular networks, the presented unified approach applies for other types of wireless networks that impose interference protection around receivers. The paper then extends the unified approach to capture cellular network characteristics (e.g., frequency reuse, multiple antenna, power control, etc.). It also presents numerical examples associated with demonstrations and discussions. To this end, the paper highlights the state-of-the- art research and points out future research directions.

  19. DYVIPAC: an integrated analysis and visualisation framework to probe multi-dimensional biological networks.

    Science.gov (United States)

    Nguyen, Lan K; Degasperi, Andrea; Cotter, Philip; Kholodenko, Boris N

    2015-07-29

    Biochemical networks are dynamic and multi-dimensional systems, consisting of tens or hundreds of molecular components. Diseases such as cancer commonly arise due to changes in the dynamics of signalling and gene regulatory networks caused by genetic alternations. Elucidating the network dynamics in health and disease is crucial to better understand the disease mechanisms and derive effective therapeutic strategies. However, current approaches to analyse and visualise systems dynamics can often provide only low-dimensional projections of the network dynamics, which often does not present the multi-dimensional picture of the system behaviour. More efficient and reliable methods for multi-dimensional systems analysis and visualisation are thus required. To address this issue, we here present an integrated analysis and visualisation framework for high-dimensional network behaviour which exploits the advantages provided by parallel coordinates graphs. We demonstrate the applicability of the framework, named "Dynamics Visualisation based on Parallel Coordinates" (DYVIPAC), to a variety of signalling networks ranging in topological wirings and dynamic properties. The framework was proved useful in acquiring an integrated understanding of systems behaviour.

  20. A statistical framework for differential network analysis from microarray data

    Directory of Open Access Journals (Sweden)

    Datta Somnath

    2010-02-01

    Full Text Available Abstract Background It has been long well known that genes do not act alone; rather groups of genes act in consort during a biological process. Consequently, the expression levels of genes are dependent on each other. Experimental techniques to detect such interacting pairs of genes have been in place for quite some time. With the advent of microarray technology, newer computational techniques to detect such interaction or association between gene expressions are being proposed which lead to an association network. While most microarray analyses look for genes that are differentially expressed, it is of potentially greater significance to identify how entire association network structures change between two or more biological settings, say normal versus diseased cell types. Results We provide a recipe for conducting a differential analysis of networks constructed from microarray data under two experimental settings. At the core of our approach lies a connectivity score that represents the strength of genetic association or interaction between two genes. We use this score to propose formal statistical tests for each of following queries: (i whether the overall modular structures of the two networks are different, (ii whether the connectivity of a particular set of "interesting genes" has changed between the two networks, and (iii whether the connectivity of a given single gene has changed between the two networks. A number of examples of this score is provided. We carried out our method on two types of simulated data: Gaussian networks and networks based on differential equations. We show that, for appropriate choices of the connectivity scores and tuning parameters, our method works well on simulated data. We also analyze a real data set involving normal versus heavy mice and identify an interesting set of genes that may play key roles in obesity. Conclusions Examining changes in network structure can provide valuable information about the

  1. The effects of music on brain functional networks: a network analysis.

    Science.gov (United States)

    Wu, J; Zhang, J; Ding, X; Li, R; Zhou, C

    2013-10-10

    The human brain can dynamically adapt to the changing surroundings. To explore this issue, we adopted graph theoretical tools to examine changes in electroencephalography (EEG) functional networks while listening to music. Three different excerpts of Chinese Guqin music were played to 16 non-musician subjects. For the main frequency intervals, synchronizations between all pair-wise combinations of EEG electrodes were evaluated with phase lag index (PLI). Then, weighted connectivity networks were created and their organizations were characterized in terms of an average clustering coefficient and characteristic path length. We found an enhanced synchronization level in the alpha2 band during music listening. Music perception showed a decrease of both normalized clustering coefficient and path length in the alpha2 band. Moreover, differences in network measures were not observed between musical excerpts. These experimental results demonstrate an increase of functional connectivity as well as a more random network structure in the alpha2 band during music perception. The present study offers support for the effects of music on human brain functional networks with a trend toward a more efficient but less economical architecture. Copyright © 2013 IBRO. Published by Elsevier Ltd. All rights reserved.

  2. Experimental Demonstration of Optical Switching of Tbit/s Data Packets for High Capacity Short-Range Networks

    DEFF Research Database (Denmark)

    Medhin, Ashenafi Kiros; Kamchevska, Valerija; Hu, Hao

    2015-01-01

    Record-high 1.28-Tbit/s optical data packets are experimentally switched in the optical domain using a LiNbO3 switch. An in-band notch-filter labeling scheme scalable to 65,536 labels is employed and a 3-km transmission distance is demonstrated.......Record-high 1.28-Tbit/s optical data packets are experimentally switched in the optical domain using a LiNbO3 switch. An in-band notch-filter labeling scheme scalable to 65,536 labels is employed and a 3-km transmission distance is demonstrated....

  3. Network analysis shining light on parasite ecology and diversity.

    Science.gov (United States)

    Poulin, Robert

    2010-10-01

    The vast number of species making up natural communities, and the myriad interactions among them, pose great difficulties for the study of community structure, dynamics and stability. Borrowed from other fields, network analysis is making great inroads in community ecology and is only now being applied to host-parasite interactions. It allows a complex system to be examined in its entirety, as opposed to one or a few components at a time. This review explores what network analysis is and how it can be used to investigate parasite ecology. It also summarizes the first findings to emerge from network analyses of host-parasite interactions and identifies promising future directions made possible by this approach. Copyright © 2010 Elsevier Ltd. All rights reserved.

  4. Topology Analysis of Social Networks Extracted from Literature

    Science.gov (United States)

    2015-01-01

    In a world where complex networks are an increasingly important part of science, it is interesting to question how the new reading of social realities they provide applies to our cultural background and in particular, popular culture. Are authors of successful novels able to reproduce social networks faithful to the ones found in reality? Is there any common trend connecting an author’s oeuvre, or a genre of fiction? Such an analysis could provide new insight on how we, as a culture, perceive human interactions and consume media. The purpose of the work presented in this paper is to define the signature of a novel’s story based on the topological analysis of its social network of characters. For this purpose, an automated tool was built that analyses the dialogs in novels, identifies characters and computes their relationships in a time-dependent manner in order to assess the network’s evolution over the course of the story. PMID:26039072

  5. Regioselective Hydration of an Alkene and Analysis of the Alcohol Product by Remote Access NMR: A Classroom Demonstration

    Science.gov (United States)

    Smith, Maureen E.; Johnson, Sara L.; Masterson, Douglas S.

    2013-01-01

    A two-part demonstration was conducted in our first-semester organic chemistry course designed to introduce students to the formation of alcohols, regioselective reactions, and analysis of organic products by NMR analysis. This demonstration utilized the oxymercuration-demercuration sequence to prepare an alcohol from an alkene in a Markovnikov…

  6. Representational Similarity Analysis Reveals Heterogeneous Networks Supporting Speech Motor Control

    DEFF Research Database (Denmark)

    Zheng, Zane; Cusack, Rhodri; Johnsrude, Ingrid

    The everyday act of speaking involves the complex processes of speech motor control. One important feature of such control is regulation of articulation when auditory concomitants of speech do not correspond to the intended motor gesture. While theoretical accounts of speech monitoring posit...... is supported by a complex neural network that is involved in linguistic, motoric and sensory processing. With the aid of novel real-time acoustic analyses and representational similarity analyses of fMRI signals, our data show functionally differentiated networks underlying auditory feedback control of speech....... multiple functional components required for detection of errors in speech planning (e.g., Levelt, 1983), neuroimaging studies generally indicate either single brain regions sensitive to speech production errors, or small, discrete networks. Here we demonstrate that the complex system controlling speech...

  7. [Applications of elementary mode analysis in biological network and pathway analysis].

    Science.gov (United States)

    Zhao, Quanyu; Yu, Shuiyan; Shi, Jiping

    2013-06-01

    Elementary mode analysis is the widely applied tool in metabolic pathway analysis. Studies based on elementary mode analysis (EMA) were performed for both metabolic network and signal transduction network. Its analytical objective is from cell to bioreactor, and even ecological system. EMA is available to describe biological behaviors by steady state and dynamic models. Not only microorganism metabolism but also human health could be evaluated by EMA. The algorithms and software for calculating elementary mode (EM) were analyzed. The applications of EMA are reviewed such as special metabolic pathway and robustness of metabolic network, metabolic flux decomposition, metabolic flux analysis at steady state, dynamic model and bioprocess simulation, network structure and regulation, strain design and signal transduction network. Solving combinatorial explosion, exploring the relations between EM and metabolic regulation, and improving the algorithm efficiency of strain design are important issues of EMA in future.

  8. Utilization of Selected Data Mining Methods for Communication Network Analysis

    Directory of Open Access Journals (Sweden)

    V. Ondryhal

    2011-06-01

    Full Text Available The aim of the project was to analyze the behavior of military communication networks based on work with real data collected continuously since 2005. With regard to the nature and amount of the data, data mining methods were selected for the purpose of analyses and experiments. The quality of real data is often insufficient for an immediate analysis. The article presents the data cleaning operations which have been carried out with the aim to improve the input data sample to obtain reliable models. Gradually, by means of properly chosen SW, network models were developed to verify generally valid patterns of network behavior as a bulk service. Furthermore, unlike the commercially available communication networks simulators, the models designed allowed us to capture nonstandard models of network behavior under an increased load, verify the correct sizing of the network to the increased load, and thus test its reliability. Finally, based on previous experience, the models enabled us to predict emergency situations with a reasonable accuracy.

  9. Cell lineage analysis demonstrates an endodermal origin of the distal urethra and perineum.

    Science.gov (United States)

    Seifert, Ashley W; Harfe, Brian D; Cohn, Martin J

    2008-06-01

    Congenital malformations of anorectal and genitourinary (collectively, anogenital) organs occur at a high frequency in humans, however the lineage of cells that gives rise to anogenital organs remains poorly understood. The penile urethra has been reported to develop from two cell populations, with the proximal urethra developing from endoderm and the distal urethra forming from an apical ectodermal invagination, however this has never been tested by direct analysis of cell lineage. During gut development, endodermal cells express Sonic hedgehog (Shh), which is required for normal patterning of digestive and genitourinary organs. We have taken advantage of the properties of Shh expression to genetically label and follow the fate of posterior gut endoderm during anogenital development. We report that the entire urethra, including the distal (glandar) region, is derived from endoderm. Cloacal endoderm also gives rise to the epithelial linings of the bladder, rectum and anterior region of the anus. Surprisingly, the lineage map also revealed an endodermal origin of the perineum, which is the first demonstration that endoderm differentiates into skin. In addition, we fate mapped genital tubercle ectoderm and show that it makes no detectable contribution to the urethra. In males, formation of the urethral tube involves septation of the urethral plate by continued growth of the urorectal septum. Analysis of cell lineage following disruption of androgen signaling revealed that the urethral plate of flutamide-treated males does not undergo this septation event. Instead, urethral plate cells persist to the ventral margin of the tubercle, mimicking the pattern seen in females. Based on these spatial and temporal fate maps, we present a new model for anogenital development and suggest that disruptions at specific developmental time points can account for the association between anorectal and genitourinary defects.

  10. Who Is Citing Whom: Citation Network Analysis among HRD Publications from 1990 to 2007

    Science.gov (United States)

    Jo, Sung Jun; Jeung, Chang-Wook; Park, Sunyoung; Yoon, Hea Jun

    2009-01-01

    A citation network analysis among four journals in human resource development (HRD) was conducted to discover the major themes of published articles in HRD. A total of 1,410 articles from 1990 to 2007 were coded. Main path analysis, influence analysis, and reduced network analysis were conducted for citation network analysis. The key findings are…

  11. Investigating scientific literacy documents with linguistic network analysis

    DEFF Research Database (Denmark)

    Bruun, Jesper; Evans, Robert Harry; Dolin, Jens

    2009-01-01

    International discussions of scientific literacy (SL) are extensive and numerous sizeable documents on SL exist. Thus, comparing different conceptions of SL is methodologically challenging. We developed an analytical tool which couples the theory of complex networks with text analysis in order...

  12. Role of Communication Networks in Behavioral Systems Analysis

    Science.gov (United States)

    Houmanfar, Ramona; Rodrigues, Nischal Joseph; Smith, Gregory S.

    2009-01-01

    This article provides an overview of communication networks and the role of verbal behavior in behavioral systems analysis. Our discussion highlights styles of leadership in the design and implementation of effective organizational contingencies that affect ways by which coordinated work practices are managed. We draw upon literature pertaining to…

  13. Globalization and International Student Mobility: A Network Analysis

    Science.gov (United States)

    Shields, Robin

    2013-01-01

    This article analyzes changes to the network of international student mobility in higher education over a 10-year period (1999-2008). International student flows have increased rapidly, exceeding 3 million in 2009, and extensive data on mobility provide unique insight into global educational processes. The analysis is informed by three theoretical…

  14. Improving Family Forest Knowledge Transfer through Social Network Analysis

    Science.gov (United States)

    Gorczyca, Erika L.; Lyons, Patrick W.; Leahy, Jessica E.; Johnson, Teresa R.; Straub, Crista L.

    2012-01-01

    To better engage Maine's family forest landowners our study used social network analysis: a computational social science method for identifying stakeholders, evaluating models of engagement, and targeting areas for enhanced partnerships. Interviews with researchers associated with a research center were conducted to identify how social network…

  15. Social Network Analysis of the Farabi Exchange Program: Student Mobility

    Science.gov (United States)

    Ugurlu, Zeynep

    2016-01-01

    Problem Statement: Exchange programs offer communication channels created through student and instructor exchanges; a flow of information takes place through these channels. The Farabi Exchange Program (FEP) is a student and instructor exchange program between institutions of higher education. Through the use of social network analysis and…

  16. Network analysis of wildfire transmission and implications for risk governance

    Science.gov (United States)

    Alan A. Ager; Cody R. Evers; Michelle A. Day; Haiganoush K. Preisler; Ana M. G. Barros; Max. Nielsen-Pincus

    2017-01-01

    We characterized wildfire transmission and exposure within a matrix of large land tenures (federal, state, and private) surrounding 56 communities within a 3.3 million ha fire prone region of central Oregon US. Wildfire simulation and network analysis were used to quantify the exchange of fire among land tenures and communities and analyze the relative contributions of...

  17. Analysis of Degree 5 Chordal Rings for Network Topologies

    DEFF Research Database (Denmark)

    Riaz, M. Tahir; Pedersen, Jens Myrup; Bujnowski, Sławomir

    2011-01-01

    This paper presents an analysis of degree 5 chordal rings, from a network topology point of view. The chordal rings are mainly evaluated with respect to average distance and diameter. We derive approximation expressions for the related ideal graphs, and show that these matches the real chordal ri...

  18. Reconstructing networks of pathways via significance analysis of their intersections

    Directory of Open Access Journals (Sweden)

    Francesconi Mirko

    2008-04-01

    Full Text Available Abstract Background Significance analysis at single gene level may suffer from the limited number of samples and experimental noise that can severely limit the power of the chosen statistical test. This problem is typically approached by applying post hoc corrections to control the false discovery rate, without taking into account prior biological knowledge. Pathway or gene ontology analysis can provide an alternative way to relax the significance threshold applied to single genes and may lead to a better biological interpretation. Results Here we propose a new analysis method based on the study of networks of pathways. These networks are reconstructed considering both the significance of single pathways (network nodes and the intersection between them (links. We apply this method for the reconstruction of networks of pathways to two gene expression datasets: the first one obtained from a c-Myc rat fibroblast cell line expressing a conditional Myc-estrogen receptor oncoprotein; the second one obtained from the comparison of Acute Myeloid Leukemia and Acute Lymphoblastic Leukemia derived from bone marrow samples. Conclusion Our method extends statistical models that have been recently adopted for the significance analysis of functional groups of genes to infer links between these groups. We show that groups of genes at the interface between different pathways can be considered as relevant even if the pathways they belong to are not significant by themselves.

  19. Characterizing naval team readiness through social network analysis

    NARCIS (Netherlands)

    Schraagen, J.M.C.; Post, W.M.

    2014-01-01

    Characterizing a team’s level of readiness in an efficient and objective way is important for organizations such as the military. Current methods to characterize real-time team interaction know limitations that may be addressed by social network analysis techniques. The purpose of the current field

  20. Locality Based Analysis of Network Flows

    Science.gov (United States)

    2004-07-21

    University Noise localities • We have been characterizing modest subnets in support of the traffic generation that will be used in the DARPA DQ system...University Software Engineering Institute © 2004 by Carnegie Mellon University Crud and Noise • In January, we observed a /16 for a week, and the whole...some examples of locality on a variety of scales for a variety of representations. • It is our hope that the general notions of locality, and clustering will provide a basis for reducing the complexity of analysis.