WorldWideScience

Sample records for network access rna

  1. Remote Network Access (RNA)

    National Research Council Canada - National Science Library

    2002-01-01

    .... Remote Network Access (RNA) includes or is associated with all communication devices/software, firewalls, intrusion detection systems and virus protection applications to ensure security of the OIG, DoD, Network from remote...

  2. Optical Access Networks

    Science.gov (United States)

    Zheng, Jun; Ansari, Nirwan

    2005-06-01

    Call for Papers: Optical Access Networks With the wide deployment of fiber-optic technology over the past two decades, we have witnessed a tremendous growth of bandwidth capacity in the backbone networks of today's telecommunications infrastructure. However, access networks, which cover the "last-mile" areas and serve numerous residential and small business users, have not been scaled up commensurately. The local subscriber lines for telephone and cable television are still using twisted pairs and coaxial cables. Most residential connections to the Internet are still through dial-up modems operating at a low speed on twisted pairs. As the demand for access bandwidth increases with emerging high-bandwidth applications, such as distance learning, high-definition television (HDTV), and video on demand (VoD), the last-mile access networks have become a bandwidth bottleneck in today's telecommunications infrastructure. To ease this bottleneck, it is imperative to provide sufficient bandwidth capacity in the access networks to open the bottleneck and thus present more opportunities for the provisioning of multiservices. Optical access solutions promise huge bandwidth to service providers and low-cost high-bandwidth services to end users and are therefore widely considered the technology of choice for next-generation access networks. To realize the vision of optical access networks, however, many key issues still need to be addressed, such as network architectures, signaling protocols, and implementation standards. The major challenges lie in the fact that an optical solution must be not only robust, scalable, and flexible, but also implemented at a low cost comparable to that of existing access solutions in order to increase the economic viability of many potential high-bandwidth applications. In recent years, optical access networks have been receiving tremendous attention from both academia and industry. A large number of research activities have been carried out or

  3. Optical Access Networks

    Science.gov (United States)

    Zheng, Jun; Ansari, Nirwan

    2005-01-01

    Call for Papers: Optical Access Networks Guest Editors Jun Zheng, University of Ottawa Nirwan Ansari, New Jersey Institute of Technology Submission Deadline: 1 June 2005 Background With the wide deployment of fiber-optic technology over the past two decades, we have witnessed a tremendous growth of bandwidth capacity in the backbone networks of today's telecommunications infrastructure. However, access networks, which cover the "last-mile" areas and serve numerous residential and small business users, have not been scaled up commensurately. The local subscriber lines for telephone and cable television are still using twisted pairs and coaxial cables. Most residential connections to the Internet are still through dial-up modems operating at a low speed on twisted pairs. As the demand for access bandwidth increases with emerging high-bandwidth applications, such as distance learning, high-definition television (HDTV), and video on demand (VoD), the last-mile access networks have become a bandwidth bottleneck in today's telecommunications infrastructure. To ease this bottleneck, it is imperative to provide sufficient bandwidth capacity in the access networks to open the bottleneck and thus present more opportunities for the provisioning of multiservices. Optical access solutions promise huge bandwidth to service providers and low-cost high-bandwidth services to end users and are therefore widely considered the technology of choice for next-generation access networks. To realize the vision of optical access networks, however, many key issues still need to be addressed, such as network architectures, signaling protocols, and implementation standards. The major challenges lie in the fact that an optical solution must be not only robust, scalable, and flexible, but also implemented at a low cost comparable to that of existing access solutions in order to increase the economic viability of many potential high-bandwidth applications. In recent years, optical access networks

  4. Fixed Access Network Sharing

    Science.gov (United States)

    Cornaglia, Bruno; Young, Gavin; Marchetta, Antonio

    2015-12-01

    Fixed broadband network deployments are moving inexorably to the use of Next Generation Access (NGA) technologies and architectures. These NGA deployments involve building fiber infrastructure increasingly closer to the customer in order to increase the proportion of fiber on the customer's access connection (Fibre-To-The-Home/Building/Door/Cabinet… i.e. FTTx). This increases the speed of services that can be sold and will be increasingly required to meet the demands of new generations of video services as we evolve from HDTV to "Ultra-HD TV" with 4k and 8k lines of video resolution. However, building fiber access networks is a costly endeavor. It requires significant capital in order to cover any significant geographic coverage. Hence many companies are forming partnerships and joint-ventures in order to share the NGA network construction costs. One form of such a partnership involves two companies agreeing to each build to cover a certain geographic area and then "cross-selling" NGA products to each other in order to access customers within their partner's footprint (NGA coverage area). This is tantamount to a bi-lateral wholesale partnership. The concept of Fixed Access Network Sharing (FANS) is to address the possibility of sharing infrastructure with a high degree of flexibility for all network operators involved. By providing greater configuration control over the NGA network infrastructure, the service provider has a greater ability to define the network and hence to define their product capabilities at the active layer. This gives the service provider partners greater product development autonomy plus the ability to differentiate from each other at the active network layer.

  5. Network Access Control For Dummies

    CERN Document Server

    Kelley, Jay; Wessels, Denzil

    2009-01-01

    Network access control (NAC) is how you manage network security when your employees, partners, and guests need to access your network using laptops and mobile devices. Network Access Control For Dummies is where you learn how NAC works, how to implement a program, and how to take real-world challenges in stride. You'll learn how to deploy and maintain NAC in your environment, identify and apply NAC standards, and extend NAC for greater network security. Along the way you'll become familiar with what NAC is (and what it isn't) as well as the key business drivers for deploying NAC.Learn the step

  6. Editorial: Next Generation Access Networks

    Science.gov (United States)

    Ruffini, Marco; Cincotti, Gabriella; Pizzinat, Anna; Vetter, Peter

    2015-12-01

    Over the past decade we have seen an increasing number of operators deploying Fibre-to-the-home (FTTH) solutions in access networks, in order to provide home users with a much needed network access upgrade, to support higher peak rates, higher sustained rates and a better and more uniform broadband coverage of the territory.

  7. Software defined access networks

    OpenAIRE

    Maricato, José Miguel Duarte

    2016-01-01

    With the increase of internet usage and the exponential growth of bandwidth consumption due to the increasing number of users of new generation equipments and the creation of new services that consume increasingly higher bandwidths, it's necessary to nd solutions to meet these new requirements. Passive optical networks (PONs) promise to solve these problems by providing a better service to users and providers. PON networks are very attractive since they don't depend on a...

  8. Wireless Multi Hop Access Networks and Protocols

    OpenAIRE

    Nilsson Plymoth, Anders

    2007-01-01

    As more and more applications and services in our society now depend on the Internet, it is important that dynamically deployed wireless multi hop networks are able to gain access to the Internet and other infrastructure networks and services. This thesis proposes and evaluates solutions for providing multi hop Internet Access. It investigates how ad hoc networks can be combined with wireless and mesh networks in order to create wireless multi hop access networks. When several access points t...

  9. Plant RNA Regulatory Network and RNA Granules in Virus Infection

    Directory of Open Access Journals (Sweden)

    Kristiina Mäkinen

    2017-12-01

    Full Text Available Regulation of post-transcriptional gene expression on mRNA level in eukaryotic cells includes translocation, translation, translational repression, storage, mRNA decay, RNA silencing, and nonsense-mediated decay. These processes are associated with various RNA-binding proteins and cytoplasmic ribonucleoprotein complexes many of which are conserved across eukaryotes. Microscopically visible aggregations formed by ribonucleoprotein complexes are termed RNA granules. Stress granules where the translationally inactive mRNAs are stored and processing bodies where mRNA decay may occur present the most studied RNA granule types. Diverse RNP-granules are increasingly being assigned important roles in viral infections. Although the majority of the molecular level studies on the role of RNA granules in viral translation and replication have been conducted in mammalian systems, some studies link also plant virus infection to RNA granules. An increasing body of evidence indicates that plant viruses require components of stress granules and processing bodies for their replication and translation, but how extensively the cellular mRNA regulatory network is utilized by plant viruses has remained largely enigmatic. Antiviral RNA silencing, which is an important regulator of viral RNA stability and expression in plants, is commonly counteracted by viral suppressors of RNA silencing. Some of the RNA silencing suppressors localize to cellular RNA granules and have been proposed to carry out their suppression functions there. Moreover, plant nucleotide-binding leucine-rich repeat protein-mediated virus resistance has been linked to enhanced processing body formation and translational repression of viral RNA. Many interesting questions relate to how the pathways of antiviral RNA silencing leading to viral RNA degradation and/or repression of translation, suppression of RNA silencing and viral RNA translation converge in plants and how different RNA granules and

  10. Plant RNA Regulatory Network and RNA Granules in Virus Infection.

    Science.gov (United States)

    Mäkinen, Kristiina; Lõhmus, Andres; Pollari, Maija

    2017-01-01

    Regulation of post-transcriptional gene expression on mRNA level in eukaryotic cells includes translocation, translation, translational repression, storage, mRNA decay, RNA silencing, and nonsense-mediated decay. These processes are associated with various RNA-binding proteins and cytoplasmic ribonucleoprotein complexes many of which are conserved across eukaryotes. Microscopically visible aggregations formed by ribonucleoprotein complexes are termed RNA granules. Stress granules where the translationally inactive mRNAs are stored and processing bodies where mRNA decay may occur present the most studied RNA granule types. Diverse RNP-granules are increasingly being assigned important roles in viral infections. Although the majority of the molecular level studies on the role of RNA granules in viral translation and replication have been conducted in mammalian systems, some studies link also plant virus infection to RNA granules. An increasing body of evidence indicates that plant viruses require components of stress granules and processing bodies for their replication and translation, but how extensively the cellular mRNA regulatory network is utilized by plant viruses has remained largely enigmatic. Antiviral RNA silencing, which is an important regulator of viral RNA stability and expression in plants, is commonly counteracted by viral suppressors of RNA silencing. Some of the RNA silencing suppressors localize to cellular RNA granules and have been proposed to carry out their suppression functions there. Moreover, plant nucleotide-binding leucine-rich repeat protein-mediated virus resistance has been linked to enhanced processing body formation and translational repression of viral RNA. Many interesting questions relate to how the pathways of antiviral RNA silencing leading to viral RNA degradation and/or repression of translation, suppression of RNA silencing and viral RNA translation converge in plants and how different RNA granules and their individual

  11. Optical Subsystems for Next Generation Access Networks

    DEFF Research Database (Denmark)

    Lazaro, J.A; Polo, V.; Schrenk, B.

    2011-01-01

    Recent optical technologies are providing higher flexibility to next generation access networks: on the one hand, providing progressive FTTx and specifically FTTH deployment, progressively shortening the copper access network; on the other hand, also opening fixed-mobile convergence solutions...... in next generation PON architectures. It is provided an overview of the optical subsystems developed for the implementation of the proposed NG-Access Networks....

  12. Location-aware network operation for cloud radio access network

    KAUST Repository

    Wang, Fanggang; Ruan, Liangzhong; Win, Moe Z.

    2017-01-01

    One of the major challenges in effectively operating a cloud radio access network (C-RAN) is the excessive overhead signaling and computation load that scale rapidly with the size of the network. In this paper, the exploitation of location

  13. Research of Ad Hoc Networks Access Algorithm

    Science.gov (United States)

    Xiang, Ma

    With the continuous development of mobile communication technology, Ad Hoc access network has become a hot research, Ad Hoc access network nodes can be used to expand capacity of multi-hop communication range of mobile communication system, even business adjacent to the community, improve edge data rates. When the ad hoc network is the access network of the internet, the gateway discovery protocol is very important to choose the most appropriate gateway to guarantee the connectivity between ad hoc network and IP based fixed networks. The paper proposes a QoS gateway discovery protocol which uses the time delay and stable route to the gateway selection conditions. And according to the gateway discovery protocol, it also proposes a fast handover scheme which can decrease the handover time and improve the handover efficiency.

  14. Joint control algorithm in access network

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    To deal with long probing delay and inaccurate probing results in the endpoint admission control method,a joint local and end-to-end admission control algorithm is proposed,which introduces local probing of access network besides end-to-end probing.Through local probing,the algorithm accurately estimated the resource status of the access network.Simulation shows that this algorithm can improve admission control performance and reduce users' average waiting time when the access network is heavily loaded.

  15. Non-coding RNA networks in cancer.

    Science.gov (United States)

    Anastasiadou, Eleni; Jacob, Leni S; Slack, Frank J

    2018-01-01

    Thousands of unique non-coding RNA (ncRNA) sequences exist within cells. Work from the past decade has altered our perception of ncRNAs from 'junk' transcriptional products to functional regulatory molecules that mediate cellular processes including chromatin remodelling, transcription, post-transcriptional modifications and signal transduction. The networks in which ncRNAs engage can influence numerous molecular targets to drive specific cell biological responses and fates. Consequently, ncRNAs act as key regulators of physiological programmes in developmental and disease contexts. Particularly relevant in cancer, ncRNAs have been identified as oncogenic drivers and tumour suppressors in every major cancer type. Thus, a deeper understanding of the complex networks of interactions that ncRNAs coordinate would provide a unique opportunity to design better therapeutic interventions.

  16. Personalizing Access to Learning Networks

    DEFF Research Database (Denmark)

    Dolog, Peter; Simon, Bernd; Nejdl, Wolfgang

    2008-01-01

    In this article, we describe a Smart Space for Learning™ (SS4L) framework and infrastructure that enables personalized access to distributed heterogeneous knowledge repositories. Helping a learner to choose an appropriate learning resource or activity is a key problem which we address in this fra......In this article, we describe a Smart Space for Learning™ (SS4L) framework and infrastructure that enables personalized access to distributed heterogeneous knowledge repositories. Helping a learner to choose an appropriate learning resource or activity is a key problem which we address...... in this framework, enabling personalized access to federated learning repositories with a vast number of learning offers. Our infrastructure includes personalization strategies both at the query and the query results level. Query rewriting is based on learning and language preferences; rule-based and ranking...

  17. Distributed medium access control in wireless networks

    CERN Document Server

    Wang, Ping

    2013-01-01

    This brief investigates distributed medium access control (MAC) with QoS provisioning for both single- and multi-hop wireless networks including wireless local area networks (WLANs), wireless ad hoc networks, and wireless mesh networks. For WLANs, an efficient MAC scheme and a call admission control algorithm are presented to provide guaranteed QoS for voice traffic and, at the same time, increase the voice capacity significantly compared with the current WLAN standard. In addition, a novel token-based scheduling scheme is proposed to provide great flexibility and facility to the network servi

  18. Optimizing the next generation optical access networks

    DEFF Research Database (Denmark)

    Amaya Fernández, Ferney Orlando; Soto, Ana Cardenas; Tafur Monroy, Idelfonso

    2009-01-01

    Several issues in the design and optimization of the next generation optical access network (NG-OAN) are presented. The noise, the distortion and the fiber optic nonlinearities are considered to optimize the video distribution link in a passive optical network (PON). A discussion of the effect...

  19. Multiple-Access Quantum-Classical Networks

    Science.gov (United States)

    Razavi, Mohsen

    2011-10-01

    A multi-user network that supports both classical and quantum communication is proposed. By relying on optical code-division multiple access techniques, this system offers simultaneous key exchange between multiple pairs of network users. A lower bound on the secure key generation rate will be derived for decoy-state quantum key distribution protocols.

  20. Achieving universal access to next generation networks

    DEFF Research Database (Denmark)

    Falch, Morten; Henten, Anders

    The paper examines investment dimensions of next generation networks in a universal service perspective in a European context. The question is how new network infrastructures for getting access to communication, information and entertainment services in the present and future information society...

  1. Accessing ANSA Objects from OSI Network Management

    OpenAIRE

    Berrah, Karrim; Gay, David; Genilloud, Guy

    1994-01-01

    OSI network management provides a general framework for the management of OSI systems, and by extension of any distributed system. However, it is not yet possible to tell to what extent the tools developed for network management will be applicable to distributed systems management. This paper assumes that network managers will want to have some control of the distributed infrastructure and applications. It examines how access to some of the ANSA management interfaces can be given to OSI netwo...

  2. Planning Multitechnology Access Networks with Performance Constraints

    Science.gov (United States)

    Chamberland, Steven

    Considering the number of access network technologies and the investment needed for the “last mile” of a solution, in today’s highly competitive markets, planning tools are crucial for the service providers to optimize the network costs and accelerate the planning process. In this paper, we propose to tackle the problem of planning access networks composed of four technologies/architectures: the digital subscriber line (xDSL) technologies deployed directly from the central office (CO), the fiber-to-the-node (FTTN), the fiber-to-the-micro-node (FTTn) and the fiber-to-the-premises (FTTP). A mathematical programming model is proposed for this planning problem that is solved using a commercial implementation of the branch-and-bound algorithm. Next, a detailed access network planning example is presented followed by a systematic set of experiments designed to assess the performance of the proposed approach.

  3. Rational Modular RNA Engineering Based on In Vivo Profiling of Structural Accessibility.

    Science.gov (United States)

    Leistra, Abigail N; Amador, Paul; Buvanendiran, Aishwarya; Moon-Walker, Alex; Contreras, Lydia M

    2017-12-15

    Bacterial small RNAs (sRNAs) have been established as powerful parts for controlling gene expression. However, development and application of engineered sRNAs has primarily focused on regulating novel synthetic targets. In this work, we demonstrate a rational modular RNA engineering approach that uses in vivo structural accessibility measurements to tune the regulatory activity of a multisubstrate sRNA for differential control of its native target network. Employing the CsrB global sRNA regulator as a model system, we use published in vivo structural accessibility data to infer the contribution of its local structures (substructures) to function and select a subset for engineering. We then modularly recombine the selected substructures, differentially representing those of presumed high or low functional contribution, to build a library of 21 CsrB variants. Using fluorescent translational reporter assays, we demonstrate that the CsrB variants achieve a 5-fold gradient of control of well-characterized Csr network targets. Interestingly, results suggest that less conserved local structures within long, multisubstrate sRNAs may represent better targets for rational engineering than their well-conserved counterparts. Lastly, mapping the impact of sRNA variants on a signature Csr network phenotype indicates the potential of this approach for tuning the activity of global sRNA regulators in the context of metabolic engineering applications.

  4. Efficient Access Control in Multimedia Social Networks

    Science.gov (United States)

    Sachan, Amit; Emmanuel, Sabu

    Multimedia social networks (MMSNs) have provided a convenient way to share multimedia contents such as images, videos, blogs, etc. Contents shared by a person can be easily accessed by anybody else over the Internet. However, due to various privacy, security, and legal concerns people often want to selectively share the contents only with their friends, family, colleagues, etc. Access control mechanisms play an important role in this situation. With access control mechanisms one can decide the persons who can access a shared content and who cannot. But continuously growing content uploads and accesses, fine grained access control requirements (e.g. different access control parameters for different parts in a picture), and specific access control requirements for multimedia contents can make the time complexity of access control to be very large. So, it is important to study an efficient access control mechanism suitable for MMSNs. In this chapter we present an efficient bit-vector transform based access control mechanism for MMSNs. The proposed approach is also compatible with other requirements of MMSNs, such as access rights modification, content deletion, etc. Mathematical analysis and experimental results show the effectiveness and efficiency of our proposed approach.

  5. Survey on Cloud Radio Access Network

    Directory of Open Access Journals (Sweden)

    Reeta Chhatani

    2016-01-01

    Full Text Available The existing wireless network will face the challenge of data tsunami in the near future. Densification of network will deal huge data traffic but will increase the interferences and network cost. At the same time, the existing wireless network is underutilized due to dynamic traffic. To deal with this adverse scenario, a change in the current network architecture is required. Based on virtualization, Cloud Radio Access Network (CRAN was proposed for wireless network. In CRAN the functionality of base station will be distributed into base band unit (BBU and remote radio heads (RRH which will achieve benefits of centralization. This paper presents a survey on CRAN centring on optimized resource allocation, energy efficiency and throughput maximization under fronthaul capacity. The existing solution and future opportunities in CRAN are also summarized.

  6. Designing Broadband Access Networks with Triple Redundancy

    DEFF Research Database (Denmark)

    Pedersen, Jens Myrup; Riaz, Muhammad Tahir; Knudsen, Thomas Phillip

    2005-01-01

    An architecture is proposed for designing broadband access networks, which offer triple redundancy to the end users, resulting in networks providing connectivity even in case of any two independent node or line failures. Two physically independent connections are offered by fiber, and the last...... provided by some wireless solution. Based on experience with planning Fiber To The Home, the architecture is designed to meet a number of demands, making it practicable and useful in realworld network planning. The proposed wired topology is planar, and suitable for being fitted onto the road network...

  7. Scalable Lunar Surface Networks and Adaptive Orbit Access, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — Innovative network architecture, protocols, and algorithms are proposed for both lunar surface networks and orbit access networks. Firstly, an overlaying...

  8. Protocol and networking design issues for local access WDM networks

    NARCIS (Netherlands)

    Salvador, M.R.; Heemstra de Groot, S.M.; Niemegeers, I.G.M.M.

    This report gives an overview of some of the protocol and networking design issues that have been addressed in Flamingo, a major ongoing project which investigates the use of WDM optical technology in local access networks. Quality of service delivery and wavelength assignment are focused on in this

  9. Protocol and networking design issues for local access WDM networks

    OpenAIRE

    Salvador, M.R.; Heemstra de Groot, S.M.; Niemegeers, I.G.M.M.

    1999-01-01

    This report gives an overview of some of the protocol and networking design issues that have been addressed in Flamingo, a major ongoing project which investigates the use of WDM optical technology in local access networks. Quality of service delivery and wavelength assignment are focused on in this report. A brief introduction to optical networks and WDM as well as a brief description of Flamingo are also included in this report.

  10. TCP Performance Enhancement for UMTS Access Network

    DEFF Research Database (Denmark)

    Hu, Liang

    2008-01-01

    is between UMTS access network and Internet. The split proxy divides the bandwidth delay product into two parts, resulting in two TCP connections with smaller bandwidth delay products. Simulation results show, the split TCP proxy can significantly improve the TCP performance under high bit rate DCH channel......We aim at optimize the TCP performance over UMTS access network challenged by the large delay bandwidth product that is mainly caused by the latency from the link layer ARQ retransmissions and diversity technique at physical layer. We propose to place a split TCP proxy at GGSN nodes which...

  11. Evaluation of Crosstalk Attacks in Access Networks

    DEFF Research Database (Denmark)

    Wagner, Christoph; Eiselt, Michael; Grobe, Klaus

    2016-01-01

    WDM-PON systems regained interest as low-cost solution for metro and access networks. We present a comparative analysis of resilience of wavelength-selective and wavelength-routed architectures against crosstalk attackers. We compare the vulnerability of these architectures against attacks...

  12. Spectrum access games for cognitive radio networks

    CSIR Research Space (South Africa)

    Masonta, MT

    2010-09-01

    Full Text Available received a wide acceptance in next generation and intelligent wireless communication systems. In this paper the authors make use of game theory approach to model and analyze cognitive radio networks in order to allow dynamic spectrum access in broadband...

  13. File access prediction using neural networks.

    Science.gov (United States)

    Patra, Prashanta Kumar; Sahu, Muktikanta; Mohapatra, Subasish; Samantray, Ronak Kumar

    2010-06-01

    One of the most vexing issues in design of a high-speed computer is the wide gap of access times between the memory and the disk. To solve this problem, static file access predictors have been used. In this paper, we propose dynamic file access predictors using neural networks to significantly improve upon the accuracy, success-per-reference, and effective-success-rate-per-reference by using neural-network-based file access predictor with proper tuning. In particular, we verified that the incorrect prediction has been reduced from 53.11% to 43.63% for the proposed neural network prediction method with a standard configuration than the recent popularity (RP) method. With manual tuning for each trace, we are able to improve upon the misprediction rate and effective-success-rate-per-reference using a standard configuration. Simulations on distributed file system (DFS) traces reveal that exact fit radial basis function (RBF) gives better prediction in high end system whereas multilayer perceptron (MLP) trained with Levenberg-Marquardt (LM) backpropagation outperforms in system having good computational capability. Probabilistic and competitive predictors are the most suitable for work stations having limited resources to deal with and the former predictor is more efficient than the latter for servers having maximum system calls. Finally, we conclude that MLP with LM backpropagation algorithm has better success rate of file prediction than those of simple perceptron, last successor, stable successor, and best k out of m predictors.

  14. Small Rna Regulatory Networks In Pseudomonas Putida

    DEFF Research Database (Denmark)

    Bojanovic, Klara; Long, Katherine

    2015-01-01

    chemicals and has a potential to be used as an efficient cell factory for various products. P. putida KT2240 is a genome-sequenced strain and a well characterized pseudomonad. Our major aim is to identify small RNA molecules (sRNAs) and their regulatory networks. A previous study has identified 37 sRNAs...... in this strain, while in other pseudomonads many more sRNAs have been found so far.P. putida KT2440 has been grown in different conditions which are likely to be encountered in industrial fermentations with the aim of using sRNAs for generation of improved cell factories. For that, cells have been grown in LB......Pseudomonas putida is a ubiquitous Gram-negative soil bacterium with a versatile metabolism and ability to degrade various toxic compounds. It has a high tolerance to different future biobased building blocks and various other stringent conditions. It is used in industry to produce some important...

  15. Pseudogenes regulate parental gene expression via ceRNA network.

    Science.gov (United States)

    An, Yang; Furber, Kendra L; Ji, Shaoping

    2017-01-01

    The concept of competitive endogenous RNA (ceRNA) was first proposed by Salmena and colleagues. Evidence suggests that pseudogene RNAs can act as a 'sponge' through competitive binding of common miRNA, releasing or attenuating repression through sequestering miRNAs away from parental mRNA. In theory, ceRNAs refer to all transcripts such as mRNA, tRNA, rRNA, long non-coding RNA, pseudogene RNA and circular RNA, because all of them may become the targets of miRNA depending on spatiotemporal situation. As binding of miRNA to the target RNA is not 100% complementary, it is possible that one miRNA can bind to multiple target RNAs and vice versa. All RNAs crosstalk through competitively binding to miRNAvia miRNA response elements (MREs) contained within the RNA sequences, thus forming a complex regulatory network. The ratio of a subset of miRNAs to the corresponding number of MREs determines repression strength on a given mRNA translation or stability. An increase in pseudogene RNA level can sequester miRNA and release repression on the parental gene, leading to an increase in parental gene expression. A massive number of transcripts constitute a complicated network that regulates each other through this proposed mechanism, though some regulatory significance may be mild or even undetectable. It is possible that the regulation of gene and pseudogene expression occurring in this manor involves all RNAs bearing common MREs. In this review, we will primarily discuss how pseudogene transcripts regulate expression of parental genes via ceRNA network and biological significance of regulation. © 2016 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine.

  16. An access alternative for mobile satellite networks

    Science.gov (United States)

    Wu, W. W.

    1988-01-01

    Conceptually, this paper discusses strategies of digital satellite communication networks for a very large number of low density traffic stations. These stations can be either aeronautical, land mobile, or maritime. The techniques can be applied to international, domestic, regional, and special purpose satellite networks. The applications can be commercial, scientific, military, emergency, navigational or educational. The key strategy is the use of a non-orthogonal access method, which tolerates overlapping signals. With n being either time or frequency partitions, and with a single overlapping signal allowed, a low cost mobile satellite system can be designed with n squared (n squared + n + 1) number of terminals.

  17. Cloud Radio Access Network architecture. Towards 5G mobile networks

    DEFF Research Database (Denmark)

    Checko, Aleksandra

    Cloud Radio Access Network (C-RAN) is a novel mobile network architecture which can address a number of challenges that mobile operators face while trying to support ever-growing end-users’ needs towards 5th generation of mobile networks (5G). The main idea behind C-RAN is to split the base...... stations into radio and baseband parts, and pool the Baseband Units (BBUs) from multiple base stations into a centralized and virtualized BBU Pool. This gives a number of benefits in terms of cost and capacity. However, the challenge is then to find an optimal functionality splitting point as well...... as to design the socalled fronthaul network, interconnecting those parts. This thesis focuses on quantifying those benefits and proposing a flexible and capacity-optimized fronthaul network. It is shown that a C-RAN with a functional split resulting in a variable bit rate on the fronthaul links brings cost...

  18. Comprehensive characterization of lncRNA-mRNA related ceRNA network across 12 major cancers

    Science.gov (United States)

    Feng, Li; Li, Feng; Sun, Zeguo; Wu, Tan; Shi, Xinrui; Li, Jing; Li, Xia

    2016-01-01

    Recent studies indicate that long noncoding RNAs (lncRNAs) can act as competing endogenous RNAs (ceRNAs) to indirectly regulate mRNAs through shared microRNAs, which represents a novel layer of RNA crosstalk and plays critical roles in the development of tumor. However, the global regulation landscape and characterization of these lncRNA related ceRNA crosstalk in cancers is still largely unknown. Here, we systematically characterized the lncRNA related ceRNA interactions across 12 major cancers and the normal physiological states by integrating multidimensional molecule profiles of more than 5000 samples. Our study suggest the large difference of ceRNA regulation between normal and tumor states and the higher similarity across similar tissue origin of tumors. The ceRNA related molecules have more conserved features in tumor networks and they play critical roles in both the normal and tumorigenesis processes. Besides, lncRNAs in the pan-cancer ceRNA network may be potential biomarkers of tumor. By exploring hub lncRNAs, we found that these conserved key lncRNAs dominate variable tumor hallmark processes across pan-cancers. Network dynamic analysis highlights the critical roles of ceRNA regulation in tumorigenesis. By analyzing conserved ceRNA interactions, we found that miRNA mediate ceRNA regulation showed different patterns across pan-cancer; while analyzing the cancer specific ceRNA interactions reveal that lncRNAs synergistically regulated tumor driver genes of cancer hallmarks. Finally, we found that ceRNA modules have the potential to predict patient survival. Overall, our study systematically dissected the lncRNA related ceRNA networks in pan-cancer that shed new light on understanding the molecular mechanism of tumorigenesis. PMID:27580177

  19. STAR-TYPE LOCAL AREA NETWORK ACCESS CONTROL

    Institute of Scientific and Technical Information of China (English)

    逯昭义; 齐藤忠夫

    1990-01-01

    The multiple access fashion is a new resolution for the star-type local area network (LAN) access control and star-type optical fibre LAN. Arguments about this network are discussed, and the results are introduced.

  20. Wi-Fi Networks Security and Accessing Control

    OpenAIRE

    Tarek S. Sobh

    2013-01-01

    As wireless networks access gains popularity in corporate, private and personal networks, the nature of wireless networks opens up new possibilities for network attacks. This paper negotiating Wi-Fi security against scanning of rogue Wi-Fi networks and other related activities and considers the monitoring of Wi-Fi traffic effects. The unauthorized access point (AP) problem has raised more attention and resulted in obtaining wireless access without subscriber permission.This work assumes Wi-Fi...

  1. Approximate Networking for Universal Internet Access

    Directory of Open Access Journals (Sweden)

    Junaid Qadir

    2017-12-01

    Full Text Available Despite the best efforts of networking researchers and practitioners, an ideal Internet experience is inaccessible to an overwhelming majority of people the world over, mainly due to the lack of cost-efficient ways of provisioning high-performance, global Internet. In this paper, we argue that instead of an exclusive focus on a utopian goal of universally accessible “ideal networking” (in which we have a high throughput and quality of service as well as low latency and congestion, we should consider providing “approximate networking” through the adoption of context-appropriate trade-offs. In this regard, we propose to leverage the advances in the emerging trend of “approximate computing” that rely on relaxing the bounds of precise/exact computing to provide new opportunities for improving the area, power, and performance efficiency of systems by orders of magnitude by embracing output errors in resilient applications. Furthermore, we propose to extend the dimensions of approximate computing towards various knobs available at network layers. Approximate networking can be used to provision “Global Access to the Internet for All” (GAIA in a pragmatically tiered fashion, in which different users around the world are provided a different context-appropriate (but still contextually functional Internet experience.

  2. Research on optical access network remote management technology

    Science.gov (United States)

    Wang, Wayne; Zou, Chen; Luo, Wenyi

    2008-11-01

    This paper goal is to provide a framework for the remote configuration and management of services for PON (Passive Optical Network) access and fiber access. Also it defines how Auto-Configuration Servers (ACS) in the network can remotely configure, troubleshoot and manage a Passive Optical Network (PON) optical network termination (ONT) with layer 3 capabilities using the CPE WAN management protocol, TR-069.

  3. Knowledge Access in Rural Inter-connected Areas Network ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Knowledge Access in Rural Inter-connected Areas Network (KariaNet) - Phase II ... the existing network to include two thematic networks on food security and rural ... Woman conquering male business in Yemen : Waleya's micro-enterprise.

  4. Optical solutions for unbundled access network

    Science.gov (United States)

    Bacîş Vasile, Irina Bristena

    2015-02-01

    The unbundling technique requires finding solutions to guarantee the economic and technical performances imposed by the nature of the services that can be offered. One of the possible solutions is the optic one; choosing this solution is justified for the following reasons: it optimizes the use of the access network, which is the most expensive part of a network (about 50% of the total investment in telecommunications networks) while also being the least used (telephone traffic on the lines has a low cost); it increases the distance between the master station/central and the terminal of the subscriber; the development of the services offered to the subscribers is conditioned by the subscriber network. For broadband services there is a need for support for the introduction of high-speed transport. A proper identification of the factors that must be satisfied and a comprehensive financial evaluation of all resources involved, both the resources that are in the process of being bought as well as extensions are the main conditions that would lead to a correct choice. As there is no single optimal technology for all development scenarios, which can take into account all access systems, a successful implementation is always done by individual/particularized scenarios. The method used today for the selection of an optimal solution is based on statistics and analysis of the various, already implemented, solutions, and on the experience that was already gained; the main evaluation criterion and the most unbiased one is the ratio between the cost of the investment and the quality of service, while serving an as large as possible number of customers.

  5. Location-aware network operation for cloud radio access network

    KAUST Repository

    Wang, Fanggang

    2017-06-20

    One of the major challenges in effectively operating a cloud radio access network (C-RAN) is the excessive overhead signaling and computation load that scale rapidly with the size of the network. In this paper, the exploitation of location information of the mobile devices is proposed to address this challenge. We consider an approach in which location-assisted channel state information (CSI) acquisition methods are introduced to complement conventional pilot-based CSI acquisition methods and avoid excessive overhead signaling. A low-complexity algorithm is designed to maximize the sum rate. An adaptive algorithm is also proposed to address the uncertainty issue in CSI acquisition. Both theoretical and numerical analyses show that location information provides a new dimension to improve throughput for next-generation massive cooperative networks.

  6. Resource Allocation for Cloud Radio Access Networks

    KAUST Repository

    Dhifallah, Oussama

    2016-04-01

    Cloud-radio access network (CRAN) is expected to be the core network architecture for next generation mobile radio system. In CRANs, joint signal processing is performed at multiple cloud computing centers (clouds) that are connected to several base stations (BSs) via high capacity backhaul links. As a result, large-scale interference management and network power consumption reduction can be effectively achieved. Unlike recent works on CRANs which consider a single cloud processing and treat inter-cloud interference as background noise, the first part of this thesis focuses on the more practical scenario of the downlink of a multi-cloud radio access network where BSs are connected to each cloud through wireline backhaul links. Assume that each cloud serves a set of pre-known single-antenna mobile users (MUs). This part focuses on minimizing the network total power consumption subject to practical constraints. The problems are solved using sophisticated techniques from optimization theory (e.g. Dual Decomposition-based algorithm and the alternating direction method of multipliers (ADMM)-based algorithm). One highlight of this part is that the proposed solutions can be implemented in a distributed fashion by allowing a reasonable information exchange between the coupled clouds. Additionally, feasible solutions of the considered optimization problems can be estimated locally at each iteration. Simulation results show that the proposed distributed algorithms converge to the centralized algorithms in a reasonable number of iterations. To further account of the backhaul congestion due to densification in CRANs, the second part of this thesis considers the downlink of a cache-enabled CRAN where each BS is equipped with a local-cache with limited size used to store the popular files without the need for backhauling. Further, each cache-enabled BS is connected to the cloud via limited capacity backhaul link and can serve a set of pre-known single antenna MUs. This part

  7. Expanding the informational chemistries of life: peptide/RNA networks

    Science.gov (United States)

    Taran, Olga; Chen, Chenrui; Omosun, Tolulope O.; Hsieh, Ming-Chien; Rha, Allisandra; Goodwin, Jay T.; Mehta, Anil K.; Grover, Martha A.; Lynn, David G.

    2017-11-01

    The RNA world hypothesis simplifies the complex biopolymer networks underlining the informational and metabolic needs of living systems to a single biopolymer scaffold. This simplification requires abiotic reaction cascades for the construction of RNA, and this chemistry remains the subject of active research. Here, we explore a complementary approach involving the design of dynamic peptide networks capable of amplifying encoded chemical information and setting the stage for mutualistic associations with RNA. Peptide conformational networks are known to be capable of evolution in disease states and of co-opting metal ions, aromatic heterocycles and lipids to extend their emergent behaviours. The coexistence and association of dynamic peptide and RNA networks appear to have driven the emergence of higher-order informational systems in biology that are not available to either scaffold independently, and such mutualistic interdependence poses critical questions regarding the search for life across our Solar System and beyond. This article is part of the themed issue 'Reconceptualizing the origins of life'.

  8. Sierra Stars Observatory Network: An Accessible Global Network

    Science.gov (United States)

    Williams, Richard; Beshore, Edward

    2011-03-01

    The Sierra Stars Observatory Network (SSON) is a unique partnership among professional observatories that provides its users with affordable high-quality calibrated image data. SSON comprises observatories in the Northern and Southern Hemisphere and is in the process of expanding to a truly global network capable of covering the entire sky 24 hours a day in the near future. The goal of SSON is to serve the needs of science-based projects and programs. Colleges, universities, institutions, and individuals use SSON for their education and research projects. The mission of SSON is to promote and expand the use of its facilities among the thousands of colleges and schools worldwide that do not have access to professional-quality automated observatory systems to use for astronomy education and research. With appropriate leadership and guidance educators can use SSON to help teach astronomy and do meaningful scientific projects. The relatively small cost of using SSON for this type of work makes it affordable and accessible for educators to start using immediately. Remote observatory services like SSON need to evolve to better support education and research initiatives of colleges, institutions and individual investigators. To meet these needs, SSON is developing a sophisticated interactive scheduling system to integrate among the nodes of the observatory network. This will enable more dynamic observations, including immediate priority interrupts, acquiring moving objects using ephemeris data, and more.

  9. Radio Access Sharing Strategies for Multiple Operators in Cellular Networks

    DEFF Research Database (Denmark)

    Popovska Avramova, Andrijana; Iversen, Villy Bæk

    2015-01-01

    deployments (required for coverage enhancement), increased base station utilization, and reduced overall power consumption. Today, network sharing in the radio access part is passive and limited to cell sites. With the introduction of Cloud Radio Access Network and Software Defined Networking adoption...... to the radio access network, the possibility for sharing baseband processing and radio spectrum becomes an important aspect of network sharing. This paper investigates strategies for active sharing of radio access among multiple operators, and analyses the individual benefits depending on the sharing degree...

  10. Next Generation Access Network Deployment in Croatia: Optical Access Networks and Current IoT/5G Status

    Science.gov (United States)

    Breskovic, Damir; Sikirica, Mladen; Begusic, Dinko

    2018-05-01

    This paper gives an overview and background of optical access network deployment in Croatia. Optical access network development in Croatia has been put into a global as well as in the European Union context. All the challenges and the driving factors for optical access networks deployment are considered. Optical access network architectures that have been deployed by most of the investors in Croatian telecommunication market are presented, as well as the architectures that are in early phase of deployment. Finally, an overview on current status of mobile networks of the fifth generation and Internet of Things is given.

  11. The entire network topology display system of terminal communication access network

    OpenAIRE

    An Yi

    2016-01-01

    Now order terminal communication access network is network technology in Shanxi Province is diversiform, device type complex, lack of unified technical standard, the terminal communication access network management system of construction constitutes a great obstacle. Need to build a “unified communication interface and communication standard, unified communications network management” of the terminal communication access network cut in the integrated network management system, for the termina...

  12. Exploring complex miRNA-mRNA interactions with Bayesian networks by splitting-averaging strategy

    Directory of Open Access Journals (Sweden)

    Liu Lin

    2009-12-01

    Full Text Available Abstract Background microRNAs (miRNAs regulate target gene expression by controlling their mRNAs post-transcriptionally. Increasing evidence demonstrates that miRNAs play important roles in various biological processes. However, the functions and precise regulatory mechanisms of most miRNAs remain elusive. Current research suggests that miRNA regulatory modules are complicated, including up-, down-, and mix-regulation for different physiological conditions. Previous computational approaches for discovering miRNA-mRNA interactions focus only on down-regulatory modules. In this work, we present a method to capture complex miRNA-mRNA interactions including all regulatory types between miRNAs and mRNAs. Results We present a method to capture complex miRNA-mRNA interactions using Bayesian network structure learning with splitting-averaging strategy. It is designed to explore all possible miRNA-mRNA interactions by integrating miRNA-targeting information, expression profiles of miRNAs and mRNAs, and sample categories. We also present an analysis of data sets for epithelial and mesenchymal transition (EMT. Our results show that the proposed method identified all possible types of miRNA-mRNA interactions from the data. Many interactions are of tremendous biological significance. Some discoveries have been validated by previous research, for example, the miR-200 family negatively regulates ZEB1 and ZEB2 for EMT. Some are consistent with the literature, such as LOX has wide interactions with the miR-200 family members for EMT. Furthermore, many novel interactions are statistically significant and worthy of validation in the near future. Conclusions This paper presents a new method to explore the complex miRNA-mRNA interactions for different physiological conditions using Bayesian network structure learning with splitting-averaging strategy. The method makes use of heterogeneous data including miRNA-targeting information, expression profiles of miRNAs and

  13. Scalable Lunar Surface Networks and Adaptive Orbit Access

    Science.gov (United States)

    Wang, Xudong

    2015-01-01

    Teranovi Technologies, Inc., has developed innovative network architecture, protocols, and algorithms for both lunar surface and orbit access networks. A key component of the overall architecture is a medium access control (MAC) protocol that includes a novel mechanism of overlaying time division multiple access (TDMA) and carrier sense multiple access with collision avoidance (CSMA/CA), ensuring scalable throughput and quality of service. The new MAC protocol is compatible with legacy Institute of Electrical and Electronics Engineers (IEEE) 802.11 networks. Advanced features include efficiency power management, adaptive channel width adjustment, and error control capability. A hybrid routing protocol combines the advantages of ad hoc on-demand distance vector (AODV) routing and disruption/delay-tolerant network (DTN) routing. Performance is significantly better than AODV or DTN and will be particularly effective for wireless networks with intermittent links, such as lunar and planetary surface networks and orbit access networks.

  14. LTER network data access policy revision: report and recommendations.

    Science.gov (United States)

    James Brunt; Peter McCartney; Stuart Gage; Don. Henshaw

    2004-01-01

    This document is a report on work carried out to update the LTER Network Data Access Policy. The current LTER Network Data Access Policy, approved by the coordinating committee in 1997, has been in use since 1990. An analysis of the current policies related to the release, access, and use of LTER data has been undertaken by a sub-committee of the LTER Network...

  15. Distributed cloud association in downlink multicloud radio access networks

    KAUST Repository

    Dahrouj, Hayssam; Al-Naffouri, Tareq Y.; Alouini, Mohamed-Slim

    2015-01-01

    This paper considers a multicloud radio access network (M-CRAN), wherein each cloud serves a cluster of base-stations (BS's) which are connected to the clouds through high capacity digital links. The network comprises several remote users, where

  16. Knowledge Access in Rural Inter-connected Areas Network ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Knowledge Access in Rural Inter-connected Areas Network (KariaNet) - Phase II ... poor by sharing innovations, best practices and indigenous knowledge using ... A third thematic network - on knowledge management strategies - will play an ...

  17. Genome-scale characterization of RNA tertiary structures and their functional impact by RNA solvent accessibility prediction.

    Science.gov (United States)

    Yang, Yuedong; Li, Xiaomei; Zhao, Huiying; Zhan, Jian; Wang, Jihua; Zhou, Yaoqi

    2017-01-01

    As most RNA structures are elusive to structure determination, obtaining solvent accessible surface areas (ASAs) of nucleotides in an RNA structure is an important first step to characterize potential functional sites and core structural regions. Here, we developed RNAsnap, the first machine-learning method trained on protein-bound RNA structures for solvent accessibility prediction. Built on sequence profiles from multiple sequence alignment (RNAsnap-prof), the method provided robust prediction in fivefold cross-validation and an independent test (Pearson correlation coefficients, r, between predicted and actual ASA values are 0.66 and 0.63, respectively). Application of the method to 6178 mRNAs revealed its positive correlation to mRNA accessibility by dimethyl sulphate (DMS) experimentally measured in vivo (r = 0.37) but not in vitro (r = 0.07), despite the lack of training on mRNAs and the fact that DMS accessibility is only an approximation to solvent accessibility. We further found strong association across coding and noncoding regions between predicted solvent accessibility of the mutation site of a single nucleotide variant (SNV) and the frequency of that variant in the population for 2.2 million SNVs obtained in the 1000 Genomes Project. Moreover, mapping solvent accessibility of RNAs to the human genome indicated that introns, 5' cap of 5' and 3' cap of 3' untranslated regions, are more solvent accessible, consistent with their respective functional roles. These results support conformational selections as the mechanism for the formation of RNA-protein complexes and highlight the utility of genome-scale characterization of RNA tertiary structures by RNAsnap. The server and its stand-alone downloadable version are available at http://sparks-lab.org. © 2016 Yang et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society.

  18. Research of user access control for networked manufacturing system

    Institute of Scientific and Technical Information of China (English)

    ZHENG Xiao-lin; LEI Yu; CHEN De-ren

    2006-01-01

    An integrated user access control method was proposed to address the issues of security and management in networked manufacturing systems (NMS).Based on the analysis of the security issues in networked manufacturing system,an integrated user access control method composed of role-based access control (RBAC),task-based access control (TBAC),relationship-driven access control (RDAC)and coalition-based access control (CBAC) was proposed,including the hierarchical user relationship model,the reference model and the process model.The elements and their relationships were defined,and the expressions of constraints authorization were given.The extensible access control markup language (XACML) was used to implement this method.This method was used in the networked manufacturing system in the Shaoxing spinning region of China.The results show that the integrated user access control method can reduce the costs of system security maintenance and management.

  19. Architecture and dynamics of overlapped RNA regulatory networks.

    Science.gov (United States)

    Lapointe, Christopher P; Preston, Melanie A; Wilinski, Daniel; Saunders, Harriet A J; Campbell, Zachary T; Wickens, Marvin

    2017-11-01

    A single protein can bind and regulate many mRNAs. Multiple proteins with similar specificities often bind and control overlapping sets of mRNAs. Yet little is known about the architecture or dynamics of overlapped networks. We focused on three proteins with similar structures and related RNA-binding specificities-Puf3p, Puf4p, and Puf5p of S. cerevisiae Using RNA Tagging, we identified a "super-network" comprised of four subnetworks: Puf3p, Puf4p, and Puf5p subnetworks, and one controlled by both Puf4p and Puf5p. The architecture of individual subnetworks, and thus the super-network, is determined by competition among particular PUF proteins to bind mRNAs, their affinities for binding elements, and the abundances of the proteins. The super-network responds dramatically: The remaining network can either expand or contract. These strikingly opposite outcomes are determined by an interplay between the relative abundance of the RNAs and proteins, and their affinities for one another. The diverse interplay between overlapping RNA-protein networks provides versatile opportunities for regulation and evolution. © 2017 Lapointe et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society.

  20. Exploring the miRNA regulatory network using evolutionary correlations.

    Directory of Open Access Journals (Sweden)

    Benedikt Obermayer

    2014-10-01

    Full Text Available Post-transcriptional regulation by miRNAs is a widespread and highly conserved phenomenon in metazoans, with several hundreds to thousands of conserved binding sites for each miRNA, and up to two thirds of all genes under miRNA regulation. At the same time, the effect of miRNA regulation on mRNA and protein levels is usually quite modest and associated phenotypes are often weak or subtle. This has given rise to the notion that the highly interconnected miRNA regulatory network exerts its function less through any individual link and more via collective effects that lead to a functional interdependence of network links. We present a Bayesian framework to quantify conservation of miRNA target sites using vertebrate whole-genome alignments. The increased statistical power of our phylogenetic model allows detection of evolutionary correlation in the conservation patterns of site pairs. Such correlations could result from collective functions in the regulatory network. For instance, co-conservation of target site pairs supports a selective benefit of combinatorial regulation by multiple miRNAs. We find that some miRNA families are under pronounced co-targeting constraints, indicating a high connectivity in the regulatory network, while others appear to function in a more isolated way. By analyzing coordinated targeting of different curated gene sets, we observe distinct evolutionary signatures for protein complexes and signaling pathways that could reflect differences in control strategies. Our method is easily scalable to analyze upcoming larger data sets, and readily adaptable to detect high-level selective constraints between other genomic loci. We thus provide a proof-of-principle method to understand regulatory networks from an evolutionary perspective.

  1. A Unified Access Model for Interconnecting Heterogeneous Wireless Networks

    Science.gov (United States)

    2015-05-01

    validation of the proposed network design for unified network access, and it lays the foundation for implementing a Software - Defined Networking ( SDN ...York (NY): Springer; 2014. Chapter 2, Software - defined networking ; p. 19–32. 5. Sharma S, Staessens D, Colle D, Pickavet M, Demeester P. A...demonstration of fast failure recovery in software defined networking . In: Korakis T, Zink M, Ott, M, editors. Testbeds and research infrastructure

  2. Control of Metastatic Progression by microRNA Regulatory Networks

    Science.gov (United States)

    Pencheva, Nora; Tavazoie, Sohail F.

    2015-01-01

    Aberrant microRNA (miRNA) expression is a defining feature of human malignancy. Specific miRNAs have been identified as promoters or suppressors of metastatic progression. These miRNAs control metastasis through divergent or convergent regulation of metastatic gene pathways. Some miRNA regulatory networks govern cell-autonomous cancer phenotypes, while others modulate the cell-extrinsic composition of the metastatic microenvironment. The use of small RNAs as probes into the molecular and cellular underpinnings of metastasis holds promise for the identification of candidate genes for potential therapeutic intervention. PMID:23728460

  3. Recurrent rewiring and emergence of RNA regulatory networks.

    Science.gov (United States)

    Wilinski, Daniel; Buter, Natascha; Klocko, Andrew D; Lapointe, Christopher P; Selker, Eric U; Gasch, Audrey P; Wickens, Marvin

    2017-04-04

    Alterations in regulatory networks contribute to evolutionary change. Transcriptional networks are reconfigured by changes in the binding specificity of transcription factors and their cognate sites. The evolution of RNA-protein regulatory networks is far less understood. The PUF (Pumilio and FBF) family of RNA regulatory proteins controls the translation, stability, and movements of hundreds of mRNAs in a single species. We probe the evolution of PUF-RNA networks by direct identification of the mRNAs bound to PUF proteins in budding and filamentous fungi and by computational analyses of orthologous RNAs from 62 fungal species. Our findings reveal that PUF proteins gain and lose mRNAs with related and emergent biological functions during evolution. We demonstrate at least two independent rewiring events for PUF3 orthologs, independent but convergent evolution of PUF4/5 binding specificity and the rewiring of the PUF4/5 regulons in different fungal lineages. These findings demonstrate plasticity in RNA regulatory networks and suggest ways in which their rewiring occurs.

  4. Prediction of miRNA-mRNA associations in Alzheimer's disease mice using network topology.

    Science.gov (United States)

    Noh, Haneul; Park, Charny; Park, Soojun; Lee, Young Seek; Cho, Soo Young; Seo, Hyemyung

    2014-08-03

    Little is known about the relationship between miRNA and mRNA expression in Alzheimer's disease (AD) at early- or late-symptomatic stages. Sequence-based target prediction algorithms and anti-correlation profiles have been applied to predict miRNA targets using omics data, but this approach often leads to false positive predictions. Here, we applied the joint profiling analysis of mRNA and miRNA expression levels to Tg6799 AD model mice at 4 and 8 months of age using a network topology-based method. We constructed gene regulatory networks and used the PageRank algorithm to predict significant interactions between miRNA and mRNA. In total, 8 cluster modules were predicted by the transcriptome data for co-expression networks of AD pathology. In total, 54 miRNAs were identified as being differentially expressed in AD. Among these, 50 significant miRNA-mRNA interactions were predicted by integrating sequence target prediction, expression analysis, and the PageRank algorithm. We identified a set of miRNA-mRNA interactions that were changed in the hippocampus of Tg6799 AD model mice. We determined the expression levels of several candidate genes and miRNA. For functional validation in primary cultured neurons from Tg6799 mice (MT) and littermate (LM) controls, the overexpression of ARRDC3 enhanced PPP1R3C expression. ARRDC3 overexpression showed the tendency to decrease the expression of miR139-5p and miR3470a in both LM and MT primary cells. Pathological environment created by Aβ treatment increased the gene expression of PPP1R3C and Sfpq but did not significantly alter the expression of miR139-5p or miR3470a. Aβ treatment increased the promoter activity of ARRDC3 gene in LM primary cells but not in MT primary cells. Our results demonstrate AD-specific changes in the miRNA regulatory system as well as the relationship between the expression levels of miRNAs and their targets in the hippocampus of Tg6799 mice. These data help further our understanding of the function

  5. Network Properties of the Ensemble of RNA Structures

    Science.gov (United States)

    Clote, Peter; Bayegan, Amir

    2015-01-01

    We describe the first dynamic programming algorithm that computes the expected degree for the network, or graph G = (V, E) of all secondary structures of a given RNA sequence a = a 1, …, a n. Here, the nodes V correspond to all secondary structures of a, while an edge exists between nodes s, t if the secondary structure t can be obtained from s by adding, removing or shifting a base pair. Since secondary structure kinetics programs implement the Gillespie algorithm, which simulates a random walk on the network of secondary structures, the expected network degree may provide a better understanding of kinetics of RNA folding when allowing defect diffusion, helix zippering, and related conformation transformations. We determine the correlation between expected network degree, contact order, conformational entropy, and expected number of native contacts for a benchmarking dataset of RNAs. Source code is available at http://bioinformatics.bc.edu/clotelab/RNAexpNumNbors. PMID:26488894

  6. Topological structure of the space of phenotypes: the case of RNA neutral networks.

    Directory of Open Access Journals (Sweden)

    Jacobo Aguirre

    Full Text Available The evolution and adaptation of molecular populations is constrained by the diversity accessible through mutational processes. RNA is a paradigmatic example of biopolymer where genotype (sequence and phenotype (approximated by the secondary structure fold are identified in a single molecule. The extreme redundancy of the genotype-phenotype map leads to large ensembles of RNA sequences that fold into the same secondary structure and can be connected through single-point mutations. These ensembles define neutral networks of phenotypes in sequence space. Here we analyze the topological properties of neutral networks formed by 12-nucleotides RNA sequences, obtained through the exhaustive folding of sequence space. A total of 4(12 sequences fragments into 645 subnetworks that correspond to 57 different secondary structures. The topological analysis reveals that each subnetwork is far from being random: it has a degree distribution with a well-defined average and a small dispersion, a high clustering coefficient, and an average shortest path between nodes close to its minimum possible value, i.e. the Hamming distance between sequences. RNA neutral networks are assortative due to the correlation in the composition of neighboring sequences, a feature that together with the symmetries inherent to the folding process explains the existence of communities. Several topological relationships can be analytically derived attending to structural restrictions and generic properties of the folding process. The average degree of these phenotypic networks grows logarithmically with their size, such that abundant phenotypes have the additional advantage of being more robust to mutations. This property prevents fragmentation of neutral networks and thus enhances the navigability of sequence space. In summary, RNA neutral networks show unique topological properties, unknown to other networks previously described.

  7. Effects of network node consolidation in optical access and aggregation networks on costs and power consumption

    Science.gov (United States)

    Lange, Christoph; Hülsermann, Ralf; Kosiankowski, Dirk; Geilhardt, Frank; Gladisch, Andreas

    2010-01-01

    The increasing demand for higher bit rates in access networks requires fiber deployment closer to the subscriber resulting in fiber-to-the-home (FTTH) access networks. Besides higher access bit rates optical access network infrastructure and related technologies enable the network operator to establish larger service areas resulting in a simplified network structure with a lower number of network nodes. By changing the network structure network operators want to benefit from a changed network cost structure by decreasing in short and mid term the upfront investments for network equipment due to concentration effects as well as by reducing the energy costs due to a higher energy efficiency of large network sites housing a high amount of network equipment. In long term also savings in operational expenditures (OpEx) due to the closing of central office (CO) sites are expected. In this paper different architectures for optical access networks basing on state-of-the-art technology are analyzed with respect to network installation costs and power consumption in the context of access node consolidation. Network planning and dimensioning results are calculated for a realistic network scenario of Germany. All node consolidation scenarios are compared against a gigabit capable passive optical network (GPON) based FTTH access network operated from the conventional CO sites. The results show that a moderate reduction of the number of access nodes may be beneficial since in that case the capital expenditures (CapEx) do not rise extraordinarily and savings in OpEx related to the access nodes are expected. The total power consumption does not change significantly with decreasing number of access nodes but clustering effects enable a more energyefficient network operation and optimized power purchase order quantities leading to benefits in energy costs.

  8. Identifying Cancer Subtypes from miRNA-TF-mRNA Regulatory Networks and Expression Data.

    Directory of Open Access Journals (Sweden)

    Taosheng Xu

    Full Text Available Identifying cancer subtypes is an important component of the personalised medicine framework. An increasing number of computational methods have been developed to identify cancer subtypes. However, existing methods rarely use information from gene regulatory networks to facilitate the subtype identification. It is widely accepted that gene regulatory networks play crucial roles in understanding the mechanisms of diseases. Different cancer subtypes are likely caused by different regulatory mechanisms. Therefore, there are great opportunities for developing methods that can utilise network information in identifying cancer subtypes.In this paper, we propose a method, weighted similarity network fusion (WSNF, to utilise the information in the complex miRNA-TF-mRNA regulatory network in identifying cancer subtypes. We firstly build the regulatory network where the nodes represent the features, i.e. the microRNAs (miRNAs, transcription factors (TFs and messenger RNAs (mRNAs and the edges indicate the interactions between the features. The interactions are retrieved from various interatomic databases. We then use the network information and the expression data of the miRNAs, TFs and mRNAs to calculate the weight of the features, representing the level of importance of the features. The feature weight is then integrated into a network fusion approach to cluster the samples (patients and thus to identify cancer subtypes. We applied our method to the TCGA breast invasive carcinoma (BRCA and glioblastoma multiforme (GBM datasets. The experimental results show that WSNF performs better than the other commonly used computational methods, and the information from miRNA-TF-mRNA regulatory network contributes to the performance improvement. The WSNF method successfully identified five breast cancer subtypes and three GBM subtypes which show significantly different survival patterns. We observed that the expression patterns of the features in some miRNA-TF-mRNA

  9. Fiber Access Networks: Reliability Analysis and Swedish Broadband Market

    Science.gov (United States)

    Wosinska, Lena; Chen, Jiajia; Larsen, Claus Popp

    Fiber access network architectures such as active optical networks (AONs) and passive optical networks (PONs) have been developed to support the growing bandwidth demand. Whereas particularly Swedish operators prefer AON, this may not be the case for operators in other countries. The choice depends on a combination of technical requirements, practical constraints, business models, and cost. Due to the increasing importance of reliable access to the network services, connection availability is becoming one of the most crucial issues for access networks, which should be reflected in the network owner's architecture decision. In many cases protection against failures is realized by adding backup resources. However, there is a trade off between the cost of protection and the level of service reliability since improving reliability performance by duplication of network resources (and capital expenditures CAPEX) may be too expensive. In this paper we present the evolution of fiber access networks and compare reliability performance in relation to investment and management cost for some representative cases. We consider both standard and novel architectures for deployment in both sparsely and densely populated areas. While some recent works focused on PON protection schemes with reduced CAPEX the current and future effort should be put on minimizing the operational expenditures (OPEX) during the access network lifetime.

  10. Open Orchestration Cloud Radio Access Network (OOCRAN) Testbed

    OpenAIRE

    Floriach-Pigem, Marti; Xercavins-Torregrosa, Guillem; Marojevic, Vuk; Gelonch-Bosch, Antoni

    2017-01-01

    The Cloud radio access network (C-RAN) offers a revolutionary approach to cellular network deployment, management and evolution. Advances in software-defined radio (SDR) and networking technology, moreover, enable delivering software-defined everything through the Cloud. Resources will be pooled and dynamically allocated leveraging abstraction, virtualization, and consolidation techniques; processes will be automated using common application programming interfaces; and network functions and s...

  11. Easy Access: Auditing the System Network

    Science.gov (United States)

    Wiech, Dean

    2013-01-01

    In today's electronic learning environment, access to appropriate systems and data is of the utmost importance to students, faculty, and staff. Without proper access to the school's internal systems, teachers could be prevented from logging on to an online learning system and students might be unable to submit course work to an online…

  12. Rural women and violence situation: access and accessibility limits to the healthcare network.

    Science.gov (United States)

    Costa, Marta Cocco da; Silva, Ethel Bastos da; Soares, Joannie Dos Santos Fachinelli; Borth, Luana Cristina; Honnef, Fernanda

    2017-07-13

    To analyze the access and accessibility to the healthcare network of women dwelling in rural contexts undergoing violence situation, as seen from the professionals' speeches. A qualitative, exploratory, descriptive study with professionals from the healthcare network services about coping with violence in four municipalities in the northern region of Rio Grande do Sul. The information derived from interviews, which have been analyzed by thematic modality. (Lack of) information of women, distance, restricted access to transportation, dependence on the partner and (lack of) attention by professionals to welcome women undergoing violence situation and (non)-articulation of the network are factors that limit the access and, as a consequence, they result in the lack of confrontation of this problem. To bring closer the services which integrate the confrontation network of violence against women and to qualify professionals to welcome these situations are factors that can facilitate the access and adhesion of rural women to the services.

  13. A Method for Upper Bounding on Network Access Speed

    DEFF Research Database (Denmark)

    Knudsen, Thomas Phillip; Patel, A.; Pedersen, Jens Myrup

    2004-01-01

    This paper presents a method for calculating an upper bound on network access speed growth and gives guidelines for further research experiments and simulations. The method is aimed at providing a basis for simulation of long term network development and resource management.......This paper presents a method for calculating an upper bound on network access speed growth and gives guidelines for further research experiments and simulations. The method is aimed at providing a basis for simulation of long term network development and resource management....

  14. Measuring sustainable accessibility potential using the mobility infrastructure's network configuration

    NARCIS (Netherlands)

    Gil, J.; Read, S.

    2012-01-01

    This paper is an exploration into the analysis of public transport networks using space syntax approaches combined with concepts of sustainable accessibility. Present urban development policy aims to achieve sustainable mobility patterns, shifting mobility to soft transportation modes such as

  15. Optical label-controlled transparent metro-access network interface

    DEFF Research Database (Denmark)

    Osadchiy, Alexey Vladimirovich

    This thesis presents results obtained during the course of my PhD research on optical signal routing and interfacing between the metropolitan and access segments of optical networks. Due to both increasing capacity demands and variety of emerging services types, new technological challenges...... control. Highlights of my research include my proposal and experimental proof of principle of an optical coherent detection based optical access network architecture providing support for a large number of users over a single distribution fiber; a spectral amplitude encoded label detection technique...... are arising for seamlessly interfacing metropolitan and access networks. Therefore, in this PhD project, I have analyzed those technological challenges and identified the key aspects to be addressed. I have also proposed and experimentally verified a number of solutions to metropolitan and access networks...

  16. A New Hybrid Channel Access Scheme for Ad Hoc Networks

    National Research Council Canada - National Science Library

    Wang, Yu; Garcia-Luna-Aceves, J. J

    2002-01-01

    Many contention-based channel access schemes have been proposed for multi-hop ad hoc networks in the recent past, and they can be divided into two categories, sender-initiated and receiver-initiated...

  17. Modelling the structure of a ceRNA-theoretical, bipartite microRNA-mRNA interaction network regulating intestinal epithelial cellular pathways using R programming.

    Science.gov (United States)

    Robinson, J M; Henderson, W A

    2018-01-12

    We report a method using functional-molecular databases and network modelling to identify hypothetical mRNA-miRNA interaction networks regulating intestinal epithelial barrier function. The model forms a data-analysis component of our cell culture experiments, which produce RNA expression data from Nanostring Technologies nCounter ® system. The epithelial tight-junction (TJ) and actin cytoskeleton interact as molecular components of the intestinal epithelial barrier. Upstream regulation of TJ-cytoskeleton interaction is effected by the Rac/Rock/Rho signaling pathway and other associated pathways which may be activated or suppressed by extracellular signaling from growth factors, hormones, and immune receptors. Pathway activations affect epithelial homeostasis, contributing to degradation of the epithelial barrier associated with osmotic dysregulation, inflammation, and tumor development. The complexity underlying miRNA-mRNA interaction networks represents a roadblock for prediction and validation of competing-endogenous RNA network function. We developed a network model to identify hypothetical co-regulatory motifs in a miRNA-mRNA interaction network related to epithelial function. A mRNA-miRNA interaction list was generated using KEGG and miRWalk2.0 databases. R-code was developed to quantify and visualize inherent network structures. We identified a sub-network with a high number of shared, targeting miRNAs, of genes associated with cellular proliferation and cancer, including c-MYC and Cyclin D.

  18. A Method for Automated Planning of FTTH Access Network Infrastructures

    DEFF Research Database (Denmark)

    Riaz, Muhammad Tahir; Pedersen, Jens Myrup; Madsen, Ole Brun

    2005-01-01

    In this paper a method for automated planning of Fiber to the Home (FTTH) access networks is proposed. We introduced a systematic approach for planning access network infrastructure. The GIS data and a set of algorithms were employed to make the planning process more automatic. The method explains...... method. The method, however, does not fully automate the planning but make the planning process significantly fast. The results and discussion are presented and conclusion is given in the end....

  19. Security Issues in Networks with Internet Access

    National Research Council Canada - National Science Library

    Landwehr, Carl E; Goldschlag, David M

    1997-01-01

    .... The principles are illustrated by describing the security issues a hypothetical company faces as the networks that support its operations evolve from strictly private, through a mix of Internet...

  20. IP access networks with QoS support

    Science.gov (United States)

    Sargento, Susana; Valadas, Rui J. M. T.; Goncalves, Jorge; Sousa, Henrique

    2001-07-01

    The increasing demand of new services and applications is pushing for drastic changes on the design of access networks targeted mainly for residential and SOHO users. Future access networks will provide full service integration (including multimedia), resource sharing at the packet level and QoS support. It is expected that using IP as the base technology, the ideal plug-and-play scenario, where the management actions of the access network operator are kept to a minimum, will be achieved easily. This paper proposes an architecture for access networks based on layer 2 or layer 3 multiplexers that allows a number of simplifications in the network elements and protocols (e.g. in the routing and addressing functions). We discuss two possible steps in the evolution of access networks towards a more efficient support of IP based services. The first one still provides no QoS support and was designed with the goal of reusing as much as possible current technologies; it is based on tunneling to transport PPP sessions. The second one introduces QoS support through the use of emerging technologies and protocols. We illustrate the different phases of a multimedia Internet access session, when using SIP for session initiation, COPS for the management of QoS policies including the AAA functions and RSVP for resource reservation.

  1. Wavelength-converted long-reach reconfigurable optical access network

    NARCIS (Netherlands)

    Tran, N.C.; Tangdiongga, E.; Koonen, A.M.J.

    2012-01-01

    Next generation optical access networks should not only increase the capacity but also be able to redistribute the capacity on the fly in order to manage more fluctuated traffic patterns. Wavelength reconfigurability is the instrument to enable such capability of network-wide bandwidth

  2. Small RNA-Controlled Gene Regulatory Networks in Pseudomonas putida

    DEFF Research Database (Denmark)

    Bojanovic, Klara

    evolved numerous mechanisms to controlgene expression in response to specific environmental signals. In addition to two-component systems, small regulatory RNAs (sRNAs) have emerged as major regulators of gene expression. The majority of sRNAs bind to mRNA and regulate their expression. They often have...... multiple targets and are incorporated into large regulatory networks and the RNA chaper one Hfq in many cases facilitates interactions between sRNAs and their targets. Some sRNAs also act by binding to protein targets and sequestering their function. In this PhD thesis we investigated the transcriptional....... Detailed insights into the mechanisms through which P. putida responds to different stress conditions and increased understanding of bacterial adaptation in natural and industrial settings were gained. Additionally, we identified genome-wide transcription start sites, andmany regulatory RNA elements...

  3. The MicroRNA Interaction Network of Lipid Diseases

    Science.gov (United States)

    Kandhro, Abdul H.; Shoombuatong, Watshara; Nantasenamat, Chanin; Prachayasittikul, Virapong; Nuchnoi, Pornlada

    2017-01-01

    Background: Dyslipidemia is one of the major forms of lipid disorder, characterized by increased triglycerides (TGs), increased low-density lipoprotein-cholesterol (LDL-C), and decreased high-density lipoprotein-cholesterol (HDL-C) levels in blood. Recently, MicroRNAs (miRNAs) have been reported to involve in various biological processes; their potential usage being a biomarkers and in diagnosis of various diseases. Computational approaches including text mining have been used recently to analyze abstracts from the public databases to observe the relationships/associations between the biological molecules, miRNAs, and disease phenotypes. Materials and Methods: In the present study, significance of text mined extracted pair associations (miRNA-lipid disease) were estimated by one-sided Fisher's exact test. The top 20 significant miRNA-disease associations were visualized on Cytoscape. The CyTargetLinker plug-in tool on Cytoscape was used to extend the network and predicts new miRNA target genes. The Biological Networks Gene Ontology (BiNGO) plug-in tool on Cytoscape was used to retrieve gene ontology (GO) annotations for the targeted genes. Results: We retrieved 227 miRNA-lipid disease associations including 148 miRNAs. The top 20 significant miRNAs analysis on CyTargetLinker provides defined, predicted and validated gene targets, further targeted genes analyzed by BiNGO showed targeted genes were significantly associated with lipid, cholesterol, apolipoprotein, and fatty acids GO terms. Conclusion: We are the first to provide a reliable miRNA-lipid disease association network based on text mining. This could help future experimental studies that aim to validate predicted gene targets. PMID:29018475

  4. The RNA Exosome Channeling and Direct Access Conformations Have Distinct In Vivo Functions

    Directory of Open Access Journals (Sweden)

    Jaeil Han

    2016-09-01

    Full Text Available The RNA exosome is a 3′–5′ ribonuclease complex that is composed of nine core subunits and an essential catalytic subunit, Rrp44. Two distinct conformations of Rrp44 were revealed in previous structural studies, suggesting that Rrp44 may change its conformation to exert its function. In the channeling conformation, (Rrp44ch, RNA accesses the active site after traversing the central channel of the RNA exosome, whereas in the other conformation, (Rrp44da, RNA gains direct access to the active site. Here, we show that the Rrp44da exosome is important for nuclear function of the RNA exosome. Defects caused by disrupting the direct access conformation are distinct from those caused by channel-occluding mutations, indicating specific functions for each conformation. Our genetic analyses provide in vivo evidence that the RNA exosome employs a direct-access route to recruit specific substrates, indicating that the RNA exosome uses alternative conformations to act on different RNA substrates.

  5. Cancer-Related Triplets of mRNA-lncRNA-miRNA Revealed by Integrative Network in Uterine Corpus Endometrial Carcinoma

    Directory of Open Access Journals (Sweden)

    Chenglin Liu

    2017-01-01

    Full Text Available The regulation of transcriptome expression level is a complex process involving multiple-level interactions among molecules such as protein coding RNA (mRNA, long noncoding RNA (lncRNA, and microRNA (miRNA, which are essential for the transcriptome stability and maintenance and regulation of body homeostasis. The availability of multilevel expression data enables a comprehensive view of the regulatory network. In this study, we analyzed the coding and noncoding gene expression profiles of 301 patients with uterine corpus endometrial carcinoma (UCEC. A new method was proposed to construct a genome-wide integrative network based on variance inflation factor (VIF regression method. The cross-regulation relations of mRNA, lncRNA, and miRNA were then selected based on clique-searching algorithm from the network, when any two molecules of the three were shown as interacting according to the integrative network. Such relation, which we call the mRNA-lncRNA-miRNA triplet, demonstrated the complexity in transcriptome regulation process. Finally, six UCEC-related triplets were selected in which the mRNA participates in endometrial carcinoma pathway, such as CDH1 and TP53. The multi-type RNAs are proved to be cross-regulated as to each of the six triplets according to literature. All the triplets demonstrated the association with the initiation and progression of UCEC. Our method provides a comprehensive strategy for the investigation of transcriptome regulation mechanism.

  6. Reliability Demands in FTTH Access Networks

    DEFF Research Database (Denmark)

    Pedersen, Jens Myrup; Knudsen, Thomas Phillip; Madsen, Ole Brun

    2004-01-01

    In this paper reliability and bandwidth demands of existing, new and expected classes of applications running over Fiber To The Home (FTTH) networks to private users and small enterprises are analyzed and discussed. Certain applications such as home security and telemedicine are likely to require...

  7. Reliability Demands in FTTH Access Networks

    DEFF Research Database (Denmark)

    Pedersen, Jens Myrup; Knudsen, Thomas Phillip; Madsen, Ole Brun

    2005-01-01

    In this paper reliability and bandwidth demands of existing, new and expected classes of applications running over Fiber To The Home (FTTH) networks to private users and small enterprises are analysed and discussed. Certain applications such as home security and telemedicine are likely to require...

  8. Joint Hybrid Backhaul and Access Links Design in Cloud-Radio Access Networks

    KAUST Repository

    Dhifallah, Oussama Najeeb; Dahrouj, Hayssam; Al-Naffouri, Tareq Y.; Alouini, Mohamed-Slim

    2015-01-01

    The cloud-radio access network (CRAN) is expected to be the core network architecture for next generation mobile radio systems. In this paper, we consider the downlink of a CRAN formed of one central processor (the cloud) and several base station

  9. Accessing the nanostructural analysis network organisation (NANO)

    International Nuclear Information System (INIS)

    Hicks, R.; Ringer, S.

    2003-01-01

    Full text: As a Major National Research Facility (MNRF), NANO unites five Australian microscopy and microanalysis centres to form the peak Australian facility for nanometric analysis of the structure and chemistry of materials. NANO is headquartered at the Australian Key Centre for Microscopy and Microanalysis at the University of Sydney and involves the Centres for Microscopy and Microanalysis at the Universities of Queensland and Western Australia, the Electron Microscope Unit at the University of New South Wales and the Microanalytical Research Centre at the University of Melbourne. Together these major centres maintain a wide range of complementary instrumentation for the characterisation of nanostructure. NANO links them into a co-ordinated national facility with unified charges and booking systems. The facility will provide open access to a wide range of present and future partners involving local and international linkages. For this reason, NANO is designed to allow the incorporation of other groups as additional nodes. All Australian researchers are eligible to apply for support to use NANO through the Travel and Access Program (NANO-TAP), which will support basic travel and accommodation costs as well as instrument time. Access to the national grid may involve on-site presence at a particular node or remote telemicroscopy. Both passive (observation) and active (operation) modes of telemicroscopy are available. This presentation will address the NANO-TAP application procedure, the use of remote telemicroscopy and the formation of additional nodes. Copyright (2003) Australian Microbeam Analysis Society

  10. Auctioning access to networks: evidence and expectations

    International Nuclear Information System (INIS)

    McDaniel, T.

    2003-01-01

    Under very strict assumptions the outcomes that make common auction designs theoretically attractive can be expected to emerge: goods will go to those who value them most and the allocation will maximize revenue for the auctioneer. In network industries such as electricity, gas, telecommunications, rail, and airlines where agents are of different sizes and incumbency these assumptions do not always apply for a number of reasons. For example, the auctioned product may be an intermediate good, bidders are not symmetric with respect to values and information, markets are mixed, and property rights are hard to define. We discuss why it is not straightforward to make theoretical predictions about expected outcomes for these industries and use the British gas industry to discuss the importance of competition and scarcity for auctions of network capacity. (Author)

  11. Performance analysis of quantum access network using code division multiple access model

    International Nuclear Information System (INIS)

    Hu Linxi; Yang Can; He Guangqiang

    2017-01-01

    A quantum access network has been implemented by frequency division multiple access and time division multiple access, while code division multiple access is limited for its difficulty to realize the orthogonality of the code. Recently, the chaotic phase shifters were proposed to guarantee the orthogonality by different chaotic signals and spread the spectral content of the quantum states. In this letter, we propose to implement the code division multiple access quantum network by using chaotic phase shifters and synchronization. Due to the orthogonality of the different chaotic phase shifter, every pair of users can faithfully transmit quantum information through a common channel and have little crosstalk between different users. Meanwhile, the broadband spectra of chaotic signals efficiently help the quantum states to defend against channel loss and noise. (paper)

  12. A slotted access control protocol for metropolitan WDM ring networks

    Science.gov (United States)

    Baziana, P. A.; Pountourakis, I. E.

    2009-03-01

    In this study we focus on the serious scalability problems that many access protocols for WDM ring networks introduce due to the use of a dedicated wavelength per access node for either transmission or reception. We propose an efficient slotted MAC protocol suitable for WDM ring metropolitan area networks. The proposed network architecture employs a separate wavelength for control information exchange prior to the data packet transmission. Each access node is equipped with a pair of tunable transceivers for data communication and a pair of fixed tuned transceivers for control information exchange. Also, each access node includes a set of fixed delay lines for synchronization reasons; to keep the data packets, while the control information is processed. An efficient access algorithm is applied to avoid both the data wavelengths and the receiver collisions. In our protocol, each access node is capable of transmitting and receiving over any of the data wavelengths, facing the scalability issues. Two different slot reuse schemes are assumed: the source and the destination stripping schemes. For both schemes, performance measures evaluation is provided via an analytic model. The analytical results are validated by a discrete event simulation model that uses Poisson traffic sources. Simulation results show that the proposed protocol manages efficient bandwidth utilization, especially under high load. Also, comparative simulation results prove that our protocol achieves significant performance improvement as compared with other WDMA protocols which restrict transmission over a dedicated data wavelength. Finally, performance measures evaluation is explored for diverse numbers of buffer size, access nodes and data wavelengths.

  13. Reconstruction and analysis of the lncRNA-miRNA-mRNA network based on competitive endogenous RNA reveal functional lncRNAs in rheumatoid arthritis.

    Science.gov (United States)

    Jiang, Hui; Ma, Rong; Zou, Shubiao; Wang, Yongzhong; Li, Zhuqing; Li, Weiping

    2017-06-01

    Rheumatoid arthritis (RA) is an autoimmune disease with an unknown etiology, occurring in approximately 1.0% of general population. More and more studies have suggested that long non-coding RNAs (lncRNAs) could play important roles in various biological processes and be associated with the pathogenesis of different kinds of diseases including RA. Although a large number of lncRNAs have been found, our knowledge of their function and physiological/pathological significance is still in its infancy. In order to reveal functional lncRNAs and identify the key lncRNAs in RA, we reconstructed a global triple network based on the competitive endogenous RNA (ceRNA) theory using the data from National Center for Biotechnology Information Gene Expression Omnibus and our previous paper. Meanwhile, Gene Ontology (GO) and pathway analysis were performed using Cytoscape plug-in BinGO and Database for Annotation, Visualization, and Integration Discovery (DAVID), respectively. We found that the lncRNA-miRNA-mRNA network was composed of 7 lncRNA nodes, 90 mRNA nodes, 24 miRNA nodes, and 301 edges. The functional assay showed that 147 GO terms and 23 pathways were enriched. In addition, three lncRNAs (S5645.1, XR_006437.1, J01878) were highly related to RA, and therefore, were selected as key lncRNAs. This study suggests that specific lncRNAs are associated with the development of RA, and three lncRNAs (S5645.1, XR_006437.1, J01878) could be used as potential diagnostic biomarkers and therapeutic targets.

  14. Auditing Medical Records Accesses via Healthcare Interaction Networks

    Science.gov (United States)

    Chen, You; Nyemba, Steve; Malin, Bradley

    2012-01-01

    Healthcare organizations are deploying increasingly complex clinical information systems to support patient care. Traditional information security practices (e.g., role-based access control) are embedded in enterprise-level systems, but are insufficient to ensure patient privacy. This is due, in part, to the dynamic nature of healthcare, which makes it difficult to predict which care providers need access to what and when. In this paper, we show that modeling operations at a higher level of granularity (e.g., the departmental level) are stable in the context of a relational network, which may enable more effective auditing strategies. We study three months of access logs from a large academic medical center to illustrate that departmental interaction networks exhibit certain invariants, such as the number, strength, and reciprocity of relationships. We further show that the relations extracted from the network can be leveraged to assess the extent to which a patient’s care satisfies expected organizational behavior. PMID:23304277

  15. The integrated analysis of RNA-seq and microRNA-seq depicts miRNA-mRNA networks involved in Japanese flounder (Paralichthys olivaceus) albinism.

    Science.gov (United States)

    Wang, Na; Wang, Ruoqing; Wang, Renkai; Tian, Yongsheng; Shao, Changwei; Jia, Xiaodong; Chen, Songlin

    2017-01-01

    pigmentation are identified. And the miRNA-mRNA regulatory network also provides a solid starting point for further elucidation of fish pigmentation deficiency.

  16. RNA SURVEILLANCE– AN EMERGING ROLE FOR RNA REGULATORY NETWORKS IN AGING

    OpenAIRE

    Montano, Monty; Long, Kimberly

    2010-01-01

    In this review, we describe recent advances in the field of RNA regulatory biology and relate these advances to aging science. We introduce a new term, RNA surveillance, an RNA regulatory process that is conserved in metazoans, and describe how RNA surveillance represents molecular cross-talk between two emerging RNA regulatory systems – RNA interference and RNA editing. We discuss how RNA surveillance mechanisms influence mRNA and microRNA expression and activity during lifespan. Additionall...

  17. On the Need of Novel Medium Access Control Schemes for Network Coding enabled Wireless Mesh Networks

    DEFF Research Database (Denmark)

    Paramanathan, Achuthan; Pahlevani, Peyman; Roetter, Daniel Enrique Lucani

    2013-01-01

    that network coding will improve the throughput in such systems, but our novel medium access scheme improves the performance in the cross topology by another 66 % for network coding and 150 % for classical forwarding in theory. These gains translate in a theoretical gain of 33 % of network coding over...

  18. Hopping control channel MAC protocol for opportunistic spectrum access networks

    Institute of Scientific and Technical Information of China (English)

    FU Jing-tuan; JI Hong; MAO Xu

    2010-01-01

    Opportunistic spectrum access (OSA) is considered as a promising approach to mitigate spectrum scarcity by allowing unlicensed users to exploit spectrum opportunities in licensed frequency bands. Derived from the existing channel-hopping multiple access (CHMA) protocol,we introduce a hopping control channel medium access control (MAC) protocol in the context of OSA networks. In our proposed protocol,all nodes in the network follow a common channel-hopping sequence; every frequency channel can be used as control channel and data channel. Considering primary users' occupancy of the channel,we use a primary user (PU) detection model to calculate the channel availability for unlicensed users' access. Then,a discrete Markov chain analytical model is applied to describe the channel states and deduce the system throughput. Through simulation,we present numerical results to demonstrate the throughput performance of our protocol and thus validate our work.

  19. Optical fiber cabling technologies for flexible access network

    Science.gov (United States)

    Tanji, Hisashi

    2008-07-01

    Fiber-to-the-home (FTTH) outside plant infrastructure should be so designed and constructed as to flexibly deal with increasing subscribers and system evolution to be expected in the future, taking minimization of total cost (CAPEX and OPEX) into consideration. With this in mind, fiber access architectures are reviewed and key technologies on optical fiber and cable for supporting flexible access network are presented. Low loss over wide wavelength (low water peak) and bend-insensitive single mode fiber is a future proof solution. Enhanced separable ribbon facilitates mid-span access to individual fibers in a cable installed, improving fiber utilizing efficiency and flexibility of distribution design. It also contributes to an excellent low PMD characteristic which could be required for video RF overlay system or high capacity long reach metro-access convergence network in the future. Bend-insensitive fiber based cabling technique including field installable connector greatly improves fiber/cable handling in installation and maintenance work.

  20. High Dimensional Modulation and MIMO Techniques for Access Networks

    DEFF Research Database (Denmark)

    Binti Othman, Maisara

    Exploration of advanced modulation formats and multiplexing techniques for next generation optical access networks are of interest as promising solutions for delivering multiple services to end-users. This thesis addresses this from two different angles: high dimensionality carrierless...... the capacity per wavelength of the femto-cell network. Bit rate up to 1.59 Gbps with fiber-wireless transmission over 1 m air distance is demonstrated. The results presented in this thesis demonstrate the feasibility of high dimensionality CAP in increasing the number of dimensions and their potentially......) optical access network. 2 X 2 MIMO RoF employing orthogonal frequency division multiplexing (OFDM) with 5.6 GHz RoF signaling over all-vertical cavity surface emitting lasers (VCSEL) WDM passive optical networks (PONs). We have employed polarization division multiplexing (PDM) to further increase...

  1. Understanding the tariff. Access to the public power transportation network

    International Nuclear Information System (INIS)

    2002-01-01

    Since the European directive of December 19, 1996 about the common rules of the European power market, the eligible companies can chose their power supplier anywhere in Europe. The manager of the French power transportation network (RTE) supplies a network access to these companies according to a tariff fixed by the decree no. 2002-1014 from July 19, 2002. The aim of this document is to explain this tariff: tariffing principles ('mail-stamp' principle, voltage domain, subscribed output power tariffs, input power tariffs), tariffing elements (access to the grid, elements of output tariffs (subscribed power, overload, emergency tariffs, modifications etc..)), invoicing modalities, output tariffs, definitions. (J.S.)

  2. Wireless ad hoc networks access for aeronautical communications

    OpenAIRE

    Besse , Frédéric; Garcia , Fabien; Pirovano , Alain; Radzik , José

    2010-01-01

    International audience; There is an increasing interest in the current aeronautical context to offer new services for civil aircraft passengers. For example, airlines want to offer their customers the opportunity to access the Internet, to manage their mails, to watch video on demand, to access corporate VPNs.... All these services represent a new type of air-ground communications called APC (Aeronautical Passenger Communications) in the ATN (Aeronautical Telecommunication Network) context. I...

  3. Identification of the miRNA-mRNA regulatory network of small cell osteosarcoma based on RNA-seq.

    Science.gov (United States)

    Xie, Lin; Liao, Yedan; Shen, Lida; Hu, Fengdi; Yu, Sunlin; Zhou, Yonghong; Zhang, Ya; Yang, Yihao; Li, Dongqi; Ren, Minyan; Yuan, Zhongqin; Yang, Zuozhang

    2017-06-27

    Small cell osteosarcoma (SCO) is a rare subtype of osteosarcoma characterized by highly aggressive progression and a poor prognosis. The miRNA and mRNA expression profiles of peripheral blood mononuclear cells (PBMCs) were obtained in 3 patients with SCO and 10 healthy individuals using high-throughput RNA-sequencing. We identified 37 dysregulated miRNAs and 1636 dysregulated mRNAs in patients with SCO compared to the healthy controls. Specifically, the 37 dysregulated miRNAs consisted of 27 up-regulated miRNAs and 10 down-regulated miRNAs; the 1636 dysregulated mRNAs consisted of 555 up-regulated mRNAs and 1081 down-regulated mRNAs. The target-genes of miRNAs were predicted, and 1334 negative correlations between miRNAs and mRNAs were used to construct an miRNA-mRNA regulatory network. Dysregulated genes were significantly enriched in pathways related to cancer, mTOR signaling and cell cycle signaling. Specifically, hsa-miR-26b-5p, hsa-miR-221-3p and hsa-miR-125b-2-3p were significantly dysregulated miRNAs and exhibited a high degree of connectivity with target genes. Overall, the expression of dysregulated genes in tumor tissues and peripheral blood samples of patients with SCO measured by quantitative real-time polymerase chain reaction corroborated with our bioinformatics analyses based on the expression profiles of PBMCs from patients with SCO. Thus, hsa-miR-26b-5p, hsa-miR-221-3p and hsa-miR-125b-2-3p may be involved in SCO tumorigenesis.

  4. Dynamic Resource Allocation in Hybrid Access Femtocell Network

    Directory of Open Access Journals (Sweden)

    Afaz Uddin Ahmed

    2014-01-01

    Full Text Available Intercell interference is one of the most challenging issues in femtocell deployment under the coverage of existing macrocell. Allocation of resources between femtocell and macrocell is essential to counter the effects of interference in dense femtocell networks. Advances in resource management strategies have improved the control mechanism for interference reduction at lower node density, but most of them are ineffective at higher node density. In this paper, a dynamic resource allocation management algorithm (DRAMA for spectrum shared hybrid access OFDMA femtocell network is proposed. To reduce the macro-femto-tier interference and to improve the quality of service, the proposed algorithm features a dynamic resource allocation scheme by controlling them both centrally and locally. The proposed scheme focuses on Femtocell Access Point (FAP owners’ satisfaction and allows maximum utilization of available resources based on congestion in the network. A simulation environment is developed to study the quantitative performance of DRAMA in hybrid access-control femtocell network and compare it to closed and open access mechanisms. The performance analysis shows that higher number of random users gets connected to the FAP without compromising FAP owners’ satisfaction allowing the macrocell to offload a large number of users in a dense heterogeneous network.

  5. Dual-mode ultraflow access networks: a hybrid solution for the access bottleneck

    Science.gov (United States)

    Kazovsky, Leonid G.; Shen, Thomas Shunrong; Dhaini, Ahmad R.; Yin, Shuang; De Leenheer, Marc; Detwiler, Benjamin A.

    2013-12-01

    Optical Flow Switching (OFS) is a promising solution for large Internet data transfers. In this paper, we introduce UltraFlow Access, a novel optical access network architecture that offers dual-mode service to its end-users: IP and OFS. With UltraFlow Access, we design and implement a new dual-mode control plane and a new dual-mode network stack to ensure efficient connection setup and reliable and optimal data transmission. We study the impact of the UltraFlow system's design on the network throughput. Our experimental results show that with an optimized system design, near optimal (around 10 Gb/s) OFS data throughput can be attained when the line rate is 10Gb/s.

  6. Changes of microRNA profile and microRNA-mRNA regulatory network in bones of ovariectomized mice.

    Science.gov (United States)

    An, Jee Hyun; Ohn, Jung Hun; Song, Jung Ah; Yang, Jae-Yeon; Park, Hyojung; Choi, Hyung Jin; Kim, Sang Wan; Kim, Seong Yeon; Park, Woog-Yang; Shin, Chan Soo

    2014-03-01

    Growing evidence shows the possibility of a role of microRNAs (miRNA) in regulating bone mass. We investigated the change of miRNAs and mRNA expression profiles in bone tissue in an ovariectomized mice model and evaluated the regulatory mechanism of bone mass mediated by miRNAs in an estrogen-deficiency state. Eight-week-old female C3H/HeJ mice underwent ovariectomy (OVX) or sham operation (Sham-op), and their femur and tibia were harvested to extract total bone RNAs after 4 weeks for microarray analysis. Eight miRNAs (miR-127, -133a, -133a*, -133b, -136, -206, -378, -378*) were identified to be upregulated after OVX, whereas one miRNA (miR-204) was downregulated. Concomitant analysis of mRNA microarray revealed that 658 genes were differentially expressed between OVX and Sham-op mice. Target prediction of differentially expressed miRNAs identified potential targets, and integrative analysis using the mRNA microarray results showed that PPARγ and CREB pathways are activated in skeletal tissues after ovariectomy. Among the potential candidates of miRNA, we further studied the role of miR-127 in vitro, which exhibited the greatest changes after OVX. We also studied the effects of miR-136, which has not been studied in the context of bone mass regulation. Transfection of miR-127 inhibitor has enhanced osteoblastic differentiation in UAMS-32 cells as measured by alkaline phosphatase activities and mRNA expression of osteoblast-specific genes, whereas miR-136 precursor has inhibited osteoblastic differentiation. Furthermore, transfection of both miR-127 and miR-136 inhibitors enhanced the osteocyte-like morphological changes and survival in MLO-Y4 cells, whereas precursors of miR-127 and -136 have aggravated dexamethasone-induced cell death. Both of the precursors enhanced osteoclastic differentiation in bone marrow macrophages, indicating that both miR-127 and -136 are negatively regulating bone mass. Taken together, these results suggest a novel insight into the

  7. Network Layer Protocol Activation for Packet Data Access in UMTS WCDMA Laboratory Network

    OpenAIRE

    Lakkisto, Erkka

    2011-01-01

    The purpose of this Bachelor’s Thesis was to set up the UMTS WCDMA network in the laboratory environment of Helsinki Metropolia University of Applied Sciences and to study the network layer protocol activation for packet data access. The development of 3G technology has been very rapid and it can be considered as one of the main technologies in telecommunication. Implementing the laboratory network in Metropolia enables teaching and researching of the modern network technology. Labora...

  8. Spectrum access and management for cognitive radio networks

    CERN Document Server

    2017-01-01

    This book presents cutting-edge research contributions that address various aspects of network design, optimization, implementation, and application of cognitive radio technologies. It demonstrates how to make better utilization of the available spectrum, cognitive radios and spectrum access to achieve effective spectrum sharing between licensed and unlicensed users. The book provides academics and researchers essential information on current developments and future trends in cognitive radios for possible integration with the upcoming 5G networks. In addition, it includes a brief introduction to cognitive radio networks for newcomers to the field.

  9. Modified network simulation model with token method of bus access

    Directory of Open Access Journals (Sweden)

    L.V. Stribulevich

    2013-08-01

    Full Text Available Purpose. To study the characteristics of the local network with the marker method of access to the bus its modified simulation model was developed. Methodology. Defining characteristics of the network is carried out on the developed simulation model, which is based on the state diagram-layer network station with the mechanism of processing priorities, both in steady state and in the performance of control procedures: the initiation of a logical ring, the entrance and exit of the station network with a logical ring. Findings. A simulation model, on the basis of which can be obtained the dependencies of the application the maximum waiting time in the queue for different classes of access, and the reaction time usable bandwidth on the data rate, the number of network stations, the generation rate applications, the number of frames transmitted per token holding time, frame length was developed. Originality. The technique of network simulation reflecting its work in the steady condition and during the control procedures, the mechanism of priority ranking and handling was proposed. Practical value. Defining network characteristics in the real-time systems on railway transport based on the developed simulation model.

  10. LncRNA, a new component of expanding RNA-protein regulatory network important for animal sperm development.

    Science.gov (United States)

    Zhang, Chenwang; Gao, Liuze; Xu, Eugene Yujun

    2016-11-01

    Spermatogenesis is one of the fundamental processes of sexual reproduction, present in almost all metazoan animals. Like many other reproductive traits, developmental features and traits of spermatogenesis are under strong selective pressure to change, both at morphological and underlying molecular levels. Yet evidence suggests that some fundamental features of spermatogenesis may be ancient and conserved among metazoan species. Identifying the underlying conserved molecular mechanisms could reveal core components of metazoan spermatogenic machinery and provide novel insight into causes of human infertility. Conserved RNA-binding proteins and their interacting RNA network emerge to be a common theme important for animal sperm development. We review research on the recent addition to the RNA family - Long non-coding RNA (lncRNA) and its roles in spermatogenesis in the context of the expanding RNA-protein network. Copyright © 2016 Elsevier Ltd. All rights reserved.

  11. Adaptive spectrum decision framework for heterogeneous dynamic spectrum access networks

    CSIR Research Space (South Africa)

    Masonta, M

    2015-09-01

    Full Text Available Spectrum decision is the ability of a cognitive radio (CR) system to select the best available spectrum band to satisfy dynamic spectrum access network (DSAN) users¿ quality of service (QoS) requirements without causing harmful interference...

  12. Access, fronthaul and backhaul networks for 5G and beyond

    CERN Document Server

    Imran, Muhammad Ali; Shakir, Muhammad Zeeshan

    2017-01-01

    This book provides an overview from both academic and industrial stakeholders of innovative backhaul/fronthaul solutions, covering a wide spectrum of underlying themes ranging from the recent thrust in edge caching for backhaul relaxation to mmWave based fronthauling for radio access networks.

  13. Resource Sharing in Heterogeneous and Cloud Radio Access Networks

    DEFF Research Database (Denmark)

    Zakrzewska, Anna; Iversen, Villy Bæk

    2012-01-01

    be improved. However, we identify the benefit of individual operators and show that it’s not equal but highly depends on the initial network dimensioning. Furthermore, we demonstrate that under specific conditions the blocking probability in an area is lower than for fully accessible system and therefore...

  14. Medium Access Control in Energy Harvesting - Wireless Sensor Networks

    DEFF Research Database (Denmark)

    Fafoutis, Xenofon

    Focusing on Wireless Sensor Networks (WSN) that are powered by energy harvesting, this dissertation focuses on energy-efficient communication links between senders and receivers that are alternating between active and sleeping states of operation. In particular, the focus lies on Medium Access...

  15. Network Asymmetries and Access Pricing in Cellular Telecommunications

    NARCIS (Netherlands)

    V. Kocsis

    2005-01-01

    textabstractNetwork shares and retail prices are not symmetric in the telecommunications market with multiple bottlenecks which give rise to new questions of access fee regulation. In this paper we consider a model with two types of asymmetry arising from different entry timing, i.e. a larger

  16. Adaptive Media Access Control for Energy Harvesting - Wireless Sensor Networks

    DEFF Research Database (Denmark)

    Fafoutis, Xenofon; Dragoni, Nicola

    2012-01-01

    ODMAC (On-Demand Media Access Control) is a recently proposed MAC protocol designed to support individual duty cycles for Energy Harvesting — Wireless Sensor Networks (EH-WSNs). Individual duty cycles are vital for EH-WSNs, because they allow nodes to adapt their energy consumption to the ever-ch...

  17. Optically transparent multiple access networks employing incoherent spectral codes

    NARCIS (Netherlands)

    Huiszoon, B.

    2008-01-01

    This Ph.D. thesis is divided into 7 chapters to provide the reader an overview of the main results achieved in di®erent sub-topics of the study towards optically transparent multiple access networks employing incoherent spectral codes taking into account wireless transmission aspects. The work

  18. Knowledge Access in Rural Inter-connected Areas Network ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Knowledge Access in Rural Inter-connected Areas Network (KariaNet) - Phase II ... and indigenous knowledge using information and communication technologies (ICTs) ... for research proposals on the aforementioned topics, action-research projects, ... Evaluating knowledge-sharing methods to improve land utilization and ...

  19. Energy challenges in optical access and aggregation networks.

    Science.gov (United States)

    Kilper, Daniel C; Rastegarfar, Houman

    2016-03-06

    Scalability is a critical issue for access and aggregation networks as they must support the growth in both the size of data capacity demands and the multiplicity of access points. The number of connected devices, the Internet of Things, is growing to the tens of billions. Prevailing communication paradigms are reaching physical limitations that make continued growth problematic. Challenges are emerging in electronic and optical systems and energy increasingly plays a central role. With the spectral efficiency of optical systems approaching the Shannon limit, increasing parallelism is required to support higher capacities. For electronic systems, as the density and speed increases, the total system energy, thermal density and energy per bit are moving into regimes that become impractical to support-for example requiring single-chip processor powers above the 100 W limit common today. We examine communication network scaling and energy use from the Internet core down to the computer processor core and consider implications for optical networks. Optical switching in data centres is identified as a potential model from which scalable access and aggregation networks for the future Internet, with the application of integrated photonic devices and intelligent hybrid networking, will emerge. © 2016 The Author(s).

  20. Reexamining microRNA site accessibility in Drosophila: a population genomics study.

    Directory of Open Access Journals (Sweden)

    Kevin Chen

    Full Text Available Kertesz et al. (Nature Genetics 2008 described PITA, a miRNA target prediction algorithm based on hybridization energy and site accessibility. In this note, we used a population genomics approach to reexamine their data and found that the PITA algorithm had lower specificity than methods based on evolutionary conservation at comparable levels of sensitivity.We also showed that deeply conserved miRNAs tend to have stronger hybridization energies to their targets than do other miRNAs. Although PITA had higher specificity in predicting targets than a naïve seed-match method, this signal was primarily due to the use of a single cutoff score for all miRNAs and to the observed correlation between conservation and hybridization energy. Overall, our results clarify the accuracy of different miRNA target prediction algorithms in Drosophila and the role of site accessibility in miRNA target prediction.

  1. Computer network access to scientific information systems for minority universities

    Science.gov (United States)

    Thomas, Valerie L.; Wakim, Nagi T.

    1993-08-01

    The evolution of computer networking technology has lead to the establishment of a massive networking infrastructure which interconnects various types of computing resources at many government, academic, and corporate institutions. A large segment of this infrastructure has been developed to facilitate information exchange and resource sharing within the scientific community. The National Aeronautics and Space Administration (NASA) supports both the development and the application of computer networks which provide its community with access to many valuable multi-disciplinary scientific information systems and on-line databases. Recognizing the need to extend the benefits of this advanced networking technology to the under-represented community, the National Space Science Data Center (NSSDC) in the Space Data and Computing Division at the Goddard Space Flight Center has developed the Minority University-Space Interdisciplinary Network (MU-SPIN) Program: a major networking and education initiative for Historically Black Colleges and Universities (HBCUs) and Minority Universities (MUs). In this paper, we will briefly explain the various components of the MU-SPIN Program while highlighting how, by providing access to scientific information systems and on-line data, it promotes a higher level of collaboration among faculty and students and NASA scientists.

  2. Engineering a Functional Small RNA Negative Autoregulation Network with Model-Guided Design.

    Science.gov (United States)

    Hu, Chelsea Y; Takahashi, Melissa K; Zhang, Yan; Lucks, Julius B

    2018-05-22

    RNA regulators are powerful components of the synthetic biology toolbox. Here, we expand the repertoire of synthetic gene networks built from these regulators by constructing a transcriptional negative autoregulation (NAR) network out of small RNAs (sRNAs). NAR network motifs are core motifs of natural genetic networks, and are known for reducing network response time and steady state signal. Here we use cell-free transcription-translation (TX-TL) reactions and a computational model to design and prototype sRNA NAR constructs. Using parameter sensitivity analysis, we design a simple set of experiments that allow us to accurately predict NAR function in TX-TL. We transfer successful network designs into Escherichia coli and show that our sRNA transcriptional network reduces both network response time and steady-state gene expression. This work broadens our ability to construct increasingly sophisticated RNA genetic networks with predictable function.

  3. Integration and visualization of non-coding RNA and protein interaction networks

    OpenAIRE

    Junge, Alexander; Refsgaard, Jan Christian; Garde, Christian; Pan, Xiaoyong; Santos Delgado, Alberto; Anthon, Christian; Alkan, Ferhat; von Mering, Christian; Workman, Christopher; Jensen, Lars Juhl; Gorodkin, Jan

    2015-01-01

    Non-coding RNAs (ncRNAs) fulfill a diverse set of biological functions relying on interactions with other molecular entities. The advent of new experimental and computational approaches makes it possible to study ncRNAs and their associations on an unprecedented scale. We present RAIN (RNA Association and Interaction Networks) - a database that combines ncRNA-ncRNA, ncRNA-mRNA and ncRNA-protein interactions with large-scale protein association networks available in the STRING database. By int...

  4. Greening radio access networks using distributed base station architectures

    DEFF Research Database (Denmark)

    Kardaras, Georgios; Soler, José; Dittmann, Lars

    2010-01-01

    Several actions for developing environmentally friendly technologies have been taken in most industrial fields. Significant resources have also been devoted in mobile communications industry. Moving towards eco-friendly alternatives is primarily a social responsibility for network operators....... However besides this, increasing energy efficiency represents a key factor for reducing operating expenses and deploying cost effective mobile networks. This paper presents how distributed base station architectures can contribute in greening radio access networks. More specifically, the advantages...... energy saving. Different subsystems have to be coordinated real-time and intelligent network nodes supporting complicated functionalities are necessary. Distributed base station architectures are ideal for this purpose mainly because of their high degree of configurability and self...

  5. Highball: A high speed, reserved-access, wide area network

    Science.gov (United States)

    Mills, David L.; Boncelet, Charles G.; Elias, John G.; Schragger, Paul A.; Jackson, Alden W.

    1990-01-01

    A network architecture called Highball and a preliminary design for a prototype, wide-area data network designed to operate at speeds of 1 Gbps and beyond are described. It is intended for applications requiring high speed burst transmissions where some latency between requesting a transmission and granting the request can be anticipated and tolerated. Examples include real-time video and disk-disk transfers, national filestore access, remote sensing, and similar applications. The network nodes include an intelligent crossbar switch, but have no buffering capabilities; thus, data must be queued at the end nodes. There are no restrictions on the network topology, link speeds, or end-end protocols. The end system, nodes, and links can operate at any speed up to the limits imposed by the physical facilities. An overview of an initial design approach is presented and is intended as a benchmark upon which a detailed design can be developed. It describes the network architecture and proposed access protocols, as well as functional descriptions of the hardware and software components that could be used in a prototype implementation. It concludes with a discussion of additional issues to be resolved in continuing stages of this project.

  6. Auction pricing of network access for North American railways

    DEFF Research Database (Denmark)

    Harrod, Steven

    2013-01-01

    The question of pricing train paths for "open access" railway networks in North America is discussed. An auction process is suggested as necessary to maintain transparency in the contracting process. Multiple random samples of auction pricing for a single track railway line demonstrate...... that the infrastructure entity will receive approximately 15.6% less than the true value of the contracted train paths. This loss of revenue threatens the objective of reducing government subsidy for the railway network. (C) 2012 Elsevier Ltd. All rights reserved....

  7. A Systematic Scheme for Multiple Access in Ethernet Passive Optical Access Networks

    Science.gov (United States)

    Ma, Maode; Zhu, Yongqing; Hiang Cheng, Tee

    2005-11-01

    While backbone networks have experienced substantial changes in the last decade, access networks have not changed much. Recently, passive optical networks (PONs) seem to be ready for commercial deployment as access networks, due to the maturity of a number of enabling technologies. Among the PON technologies, Ethernet PON (EPON) standardized by the IEEE 802.3ah Ethernet in the First Mile (EFM) Task Force is the most attractive one because of its high speed, low cost, familiarity, interoperability, and low overhead. In this paper, we consider the issue of upstream channel sharing in the EPONs. We propose a novel multiple-access control scheme to provide bandwidth-guaranteed service for high-demand customers, while providing best effort service to low-demand customers according to the service level agreement (SLA). The analytical and simulation results prove that the proposed scheme performs best in what it is designed to do compared to another well-known scheme that has not considered providing differentiated services. With business customers preferring premium services with guaranteed bandwidth and residential users preferring low-cost best effort services, our scheme could benefit both groups of subscribers, as well as the operators.

  8. On the Design of Energy Efficient Optical Networks with Software Defined Networking Control Across Core and Access Networks

    DEFF Research Database (Denmark)

    Wang, Jiayuan; Yan, Ying; Dittmann, Lars

    2013-01-01

    This paper presents a Software Defined Networking (SDN) control plane based on an overlay GMPLS control model. The SDN control platform manages optical core networks (WDM/DWDM networks) and the associated access networks (GPON networks), which makes it possible to gather global information...... and enable wider areas' energy efficiency networking. The energy related information of the networks and the types of the traffic flows are collected and utilized for the end-to-end QoS provision. Dynamic network simulation results show that by applying different routing algorithms according to the type...... of traffic in the core networks, the energy efficiency of the network is improved without compromising the quality of service....

  9. A Fuzzy Preprocessing Module for Optimizing the Access Network Selection in Wireless Networks

    Directory of Open Access Journals (Sweden)

    Faisal Kaleem

    2013-01-01

    Full Text Available A heterogeneous wireless network is characterized by the presence of different wireless access technologies that coexist in an overlay fashion. These wireless access technologies usually differ in terms of their operating parameters. On the other hand, Mobile Stations (MSs in a heterogeneous wireless network are equipped with multiple interfaces to access different types of services from these wireless access technologies. The ultimate goal of these heterogeneous wireless networks is to provide global connectivity with efficient ubiquitous computing to these MSs based on the Always Best Connected (ABC principle. This is where the need for intelligent and efficient Vertical Handoffs (VHOs between wireless technologies in a heterogeneous environment becomes apparent. This paper presents the design and implementation of a fuzzy multicriteria based Vertical Handoff Necessity Estimation (VHONE scheme that determines the proper time for VHO, while considering the continuity and quality of the currently utilized service, and the end-users' satisfaction.

  10. Quantitative analysis of access strategies to remoteinformation in network services

    DEFF Research Database (Denmark)

    Olsen, Rasmus Løvenstein; Schwefel, Hans-Peter; Hansen, Martin Bøgsted

    2006-01-01

    of analytic models to compute different performance metrics for these approaches, with special focus on the so-called mismatch probability. The results of the analytic models allow for design decisions on which strategy to implement for specific input parameters (change rate of the information element......Remote access to dynamically changing information elements is a required functionality for various network services, including routing and instances of context-sensitive networking. Three fundamentally different strategies for such access are investigated in this paper: (1) a reactive approach...... initiated by the requesting entity, and two versions of proactive approaches in which the entity that contains the information element actively propagates its changes to potential requesters, either (2) periodically or triggered by changes of the information element (3). This paper first develops a set...

  11. On Planning of FTTH Access Networks with and without Redundancy

    DEFF Research Database (Denmark)

    Riaz, M. Tahir; Haraldsson, Gustav; Gutierrez Lopez, Jose Manuel

    2010-01-01

    This paper presents a planning analysis of FTTH access network with and without redundancy. Traditionally, access networks are planned only without redundancy, which is mainly due to lowering the cost of deployment. As fiber optics provide a huge amount of capacity, more and more services are being...... offered on a single fiber connection. As a single point of failure in fiber connection can cause multiple service deprivation therefore redundancy is very crucial. In this work, an automated planning model was used to test different scenarios of implementation. A cost estimation is presented in terms...... of digging and amount of fiber used. Three topologies, including the traditional one “tree topology”, were test with combination of various passive optical technologies....

  12. Network Performance and Quality of Experience of Remote Access Laboratories

    Directory of Open Access Journals (Sweden)

    Alexander A. Kist

    2012-11-01

    Full Text Available Remote Access Laboratories (RAL have become important learning and teaching tools. This paper presents a performance study that targets a specific remote access architecture implemented within a universities operational environment. This particular RAL system provides globally authenticated and arbitrated remote access to virtualized computers as well as computer controlled hardware experiments. This paper presents system performance results that have been obtained utilizing both a set of automated and human subject tests. Principle objectives of the study were: To gain a better understanding of the nature of network traffic caused by experimental activity usage; to obtain an indication of user expectations of activity performance; and to develop a measure to predict Quality of Experience, based on easily measurable Quality of Service parameters. The study emulates network layer variation of access-bandwidth and round-trip-time of typical usage scenarios and contrasts against user perception results that allow classifying expected user performance. It demonstrates that failure rate is excellent measure of usability, and that round-trip-time predominantly affects user experience. Thin-client and remote desktop architectures are popular to separate the location of users and the actual data processing and use similar structures, hence results of this study to be applied in these application areas as well.

  13. Monday 9 January 2006: RESTRICTED ACCESS to the Technical Network

    CERN Multimedia

    CNIC Users Exchange and IT/CS

    2005-01-01

    As of Monday 9 January 2006, Ethernet access from the general CERN network to the Technical Network (TN) will be restricted in order to improve security on the TN. As a result, all Ethernet communication between the General Purpose Network (GPN) and the TN will be filtered. Only communication lines to the general IT services such as DNS, TP, NICE, DFS, AFS, Antivirus, Linux installation servers, License servers, OracleDB, TSM backup servers and dedicated AB and TS servers on the GPN will remain open. Please make sure that all your devices are registered properly in the network database (LANDB): http://network.cern.ch/. You are encouraged to make proper use of the 'Tag' and 'Description' fields in order to identify your system later on. If your system depends on special services on the GPN or is split between the GPN and the TN, e.g. consists of devices (PCs, PLCs, VME crates, webcams, etc.) connected to both the TN and the GPN, please contact the Technical-Network.Administrator@cern.ch . They will include...

  14. Distributed cloud association in downlink multicloud radio access networks

    KAUST Repository

    Dahrouj, Hayssam

    2015-03-01

    This paper considers a multicloud radio access network (M-CRAN), wherein each cloud serves a cluster of base-stations (BS\\'s) which are connected to the clouds through high capacity digital links. The network comprises several remote users, where each user can be connected to one (and only one) cloud. This paper studies the user-to-cloud-assignment problem by maximizing a network-wide utility subject to practical cloud connectivity constraints. The paper solves the problem by using an auction-based iterative algorithm, which can be implemented in a distributed fashion through a reasonable exchange of information between the clouds. The paper further proposes a centralized heuristic algorithm, with low computational complexity. Simulations results show that the proposed algorithms provide appreciable performance improvements as compared to the conventional cloud-less assignment solutions. © 2015 IEEE.

  15. Distributed Robust Power Minimization for the Downlink of Multi-Cloud Radio Access Networks

    KAUST Repository

    Dhifallah, Oussama Najeeb; Dahrouj, Hayssam; Al-Naffouri, Tareq Y.; Alouini, Mohamed-Slim

    2017-01-01

    Conventional cloud radio access networks assume single cloud processing and treat inter-cloud interference as background noise. This paper considers the downlink of a multi-cloud radio access network (CRAN) where each cloud is connected to several

  16. RAIN: RNA-protein Association and Interaction Networks

    DEFF Research Database (Denmark)

    Junge, Alexander; Refsgaard, Jan Christian; Garde, Christian

    2017-01-01

    is challenging due to data heterogeneity. Here, we present a database of ncRNA-RNA and ncRNA-protein interactions and its integration with the STRING database of protein-protein interactions. These ncRNA associations cover four organisms and have been established from curated examples, experimental data...

  17. Joint Hybrid Backhaul and Access Links Design in Cloud-Radio Access Networks

    KAUST Repository

    Dhifallah, Oussama Najeeb

    2015-09-06

    The cloud-radio access network (CRAN) is expected to be the core network architecture for next generation mobile radio systems. In this paper, we consider the downlink of a CRAN formed of one central processor (the cloud) and several base station (BS), where each BS is connected to the cloud via either a wireless or capacity-limited wireline backhaul link. The paper addresses the joint design of the hybrid backhaul links (i.e., designing the wireline and wireless backhaul connections from the cloud to the BSs) and the access links (i.e., determining the sparse beamforming solution from the BSs to the users). The paper formulates the hybrid backhaul and access link design problem by minimizing the total network power consumption. The paper solves the problem using a two-stage heuristic algorithm. At one stage, the sparse beamforming solution is found using a weighted mixed 11/12 norm minimization approach; the correlation matrix of the quantization noise of the wireline backhaul links is computed using the classical rate-distortion theory. At the second stage, the transmit powers of the wireless backhaul links are found by solving a power minimization problem subject to quality-of-service constraints, based on the principle of conservation of rate by utilizing the rates found in the first stage. Simulation results suggest that the performance of the proposed algorithm approaches the global optimum solution, especially at high signal-to-interference-plus-noise ratio (SINR).

  18. IntNetLncSim: an integrative network analysis method to infer human lncRNA functional similarity.

    Science.gov (United States)

    Cheng, Liang; Shi, Hongbo; Wang, Zhenzhen; Hu, Yang; Yang, Haixiu; Zhou, Chen; Sun, Jie; Zhou, Meng

    2016-07-26

    Increasing evidence indicated that long non-coding RNAs (lncRNAs) were involved in various biological processes and complex diseases by communicating with mRNAs/miRNAs each other. Exploiting interactions between lncRNAs and mRNA/miRNAs to lncRNA functional similarity (LFS) is an effective method to explore function of lncRNAs and predict novel lncRNA-disease associations. In this article, we proposed an integrative framework, IntNetLncSim, to infer LFS by modeling the information flow in an integrated network that comprises both lncRNA-related transcriptional and post-transcriptional information. The performance of IntNetLncSim was evaluated by investigating the relationship of LFS with the similarity of lncRNA-related mRNA sets (LmRSets) and miRNA sets (LmiRSets). As a result, LFS by IntNetLncSim was significant positively correlated with the LmRSet (Pearson correlation γ2=0.8424) and LmiRSet (Pearson correlation γ2=0.2601). Particularly, the performance of IntNetLncSim is superior to several previous methods. In the case of applying the LFS to identify novel lncRNA-disease relationships, we achieved an area under the ROC curve (0.7300) in experimentally verified lncRNA-disease associations based on leave-one-out cross-validation. Furthermore, highly-ranked lncRNA-disease associations confirmed by literature mining demonstrated the excellent performance of IntNetLncSim. Finally, a web-accessible system was provided for querying LFS and potential lncRNA-disease relationships: http://www.bio-bigdata.com/IntNetLncSim.

  19. Extending AAA operational model for profile-based access control in ethernet-based Neutral Access Networks

    NARCIS (Netherlands)

    Matias, J.; Jacob, E.; Demchenko, Y.; de Laat, C.; Gommans, L.; Macías López, E.M.; Bogliolo, A.; Perry, M.; Ran, M

    2010-01-01

    Neutral Access Networks (NAN) have appeared as a new model to overcome some restrictions and lack of flexibility that are present currently in broadband access networks. NAN brings new business opportunities by opening this market to new stakeholders. Although the NAN model is accepted, there are

  20. Systematic Analysis of RNA Regulatory Network in Rat Brain after Ischemic Stroke

    Directory of Open Access Journals (Sweden)

    Juan Liu

    2018-01-01

    Full Text Available Although extensive studies have identified large number of microRNAs (miRNAs and long noncoding RNAs (lncRNAs in ischemic stroke, the RNA regulation network response to focal ischemia remains poorly understood. In this study, we simultaneously interrogate the expression profiles of lncRNAs, miRNAs, and mRNAs changes during focal ischemia induced by transient middle cerebral artery occlusion. A set of 1924 novel lncRNAs were identified and may involve brain injury and DNA repair as revealed by coexpression network analysis. Furthermore, many short interspersed elements (SINE mediated lncRNA:mRNA duplexes were identified, implying that lncRNAs mediate Staufen1-mediated mRNA decay (SMD which may play a role during focal ischemia. Moreover, based on the competitive endogenous RNA (ceRNA hypothesis, a stroke regulatory ceRNA network which reveals functional lncRNA:miRNA:mRNA interactions was revealed in ischemic stroke. In brief, this work reports a large number of novel lncRNAs responding to focal ischemia and constructs a systematic RNA regulation network which highlighted the role of ncRNAs in ischemic stroke.

  1. RNA Sequencing and Bioinformatics Analysis Implicate the Regulatory Role of a Long Noncoding RNA-mRNA Network in Hepatic Stellate Cell Activation.

    Science.gov (United States)

    Guo, Can-Jie; Xiao, Xiao; Sheng, Li; Chen, Lili; Zhong, Wei; Li, Hai; Hua, Jing; Ma, Xiong

    2017-01-01

    To analyze the long noncoding (lncRNA)-mRNA expression network and potential roles in rat hepatic stellate cells (HSCs) during activation. LncRNA expression was analyzed in quiescent and culture-activated HSCs by RNA sequencing, and differentially expressed lncRNAs verified by quantitative reverse transcription polymerase chain reaction (qRT-PCR) were subjected to bioinformatics analysis. In vivo analyses of differential lncRNA-mRNA expression were performed on a rat model of liver fibrosis. We identified upregulation of 12 lncRNAs and 155 mRNAs and downregulation of 12 lncRNAs and 374 mRNAs in activated HSCs. Additionally, we identified the differential expression of upregulated lncRNAs (NONRATT012636.2, NONRATT016788.2, and NONRATT021402.2) and downregulated lncRNAs (NONRATT007863.2, NONRATT019720.2, and NONRATT024061.2) in activated HSCs relative to levels observed in quiescent HSCs, and Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analyses showed that changes in lncRNAs associated with HSC activation revealed 11 significantly enriched pathways according to their predicted targets. Moreover, based on the predicted co-expression network, the relative dynamic levels of NONRATT013819.2 and lysyl oxidase (Lox) were compared during HSC activation both in vitro and in vivo. Our results confirmed the upregulation of lncRNA NONRATT013819.2 and Lox mRNA associated with the extracellular matrix (ECM)-related signaling pathway in HSCs and fibrotic livers. Our results detailing a dysregulated lncRNA-mRNA network might provide new treatment strategies for hepatic fibrosis based on findings indicating potentially critical roles for NONRATT013819.2 and Lox in ECM remodeling during HSC activation. © 2017 The Author(s). Published by S. Karger AG, Basel.

  2. Accessing Wireless Sensor Networks Via Dynamically Reconfigurable Interaction Models

    Directory of Open Access Journals (Sweden)

    Maria Cecília Gomes

    2012-12-01

    Full Text Available The Wireless Sensor Networks (WSNs technology is already perceived as fundamental for science across many domains, since it provides a low cost solution for environment monitoring. WSNs representation via the service concept and its inclusion in Web environments, e.g. through Web services, supports particularly their open/standard access and integration. Although such Web enabled WSNs simplify data access, network parameterization and aggregation, the existing interaction models and run-time adaptation mechanisms available to clients are still scarce. Nevertheless, applications increasingly demand richer and more flexible accesses besides the traditional client/server. For instance, applications may require a streaming model in order to avoid sequential data requests, or the asynchronous notification of subscribed data through the publish/subscriber. Moreover, the possibility to automatically switch between such models at runtime allows applications to define flexible context-based data acquisition. To this extent, this paper discusses the relevance of the session and pattern abstractions on the design of a middleware prototype providing richer and dynamically reconfigurable interaction models to Web enabled WSNs.

  3. Downlink Non-Orthogonal Multiple Access (NOMA) in Poisson Networks

    KAUST Repository

    Ali, Konpal S.

    2018-03-21

    A network model is considered where Poisson distributed base stations transmit to $N$ power-domain non-orthogonal multiple access (NOMA) users (UEs) each that employ successive interference cancellation (SIC) for decoding. We propose three models for the clustering of NOMA UEs and consider two different ordering techniques for the NOMA UEs: mean signal power-based and instantaneous signal-to-intercell-interference-and-noise-ratio-based. For each technique, we present a signal-to-interference-and-noise ratio analysis for the coverage of the typical UE. We plot the rate region for the two-user case and show that neither ordering technique is consistently superior to the other. We propose two efficient algorithms for finding a feasible resource allocation that maximize the cell sum rate $\\\\mathcal{R}_{\\ m tot}$, for general $N$, constrained to: 1) a minimum rate $\\\\mathcal{T}$ for each UE, 2) identical rates for all UEs. We show the existence of: 1) an optimum $N$ that maximizes the constrained $\\\\mathcal{R}_{\\ m tot}$ given a set of network parameters, 2) a critical SIC level necessary for NOMA to outperform orthogonal multiple access. The results highlight the importance in choosing the network parameters $N$, the constraints, and the ordering technique to balance the $\\\\mathcal{R}_{\\ m tot}$ and fairness requirements. We also show that interference-aware UE clustering can significantly improve performance.

  4. Non-Orthogonal Multiple Access for Ubiquitous Wireless Sensor Networks.

    Science.gov (United States)

    Anwar, Asim; Seet, Boon-Chong; Ding, Zhiguo

    2018-02-08

    Ubiquitous wireless sensor networks (UWSNs) have become a critical technology for enabling smart cities and other ubiquitous monitoring applications. Their deployment, however, can be seriously hampered by the spectrum available to the sheer number of sensors for communication. To support the communication needs of UWSNs without requiring more spectrum resources, the power-domain non-orthogonal multiple access (NOMA) technique originally proposed for 5th Generation (5G) cellular networks is investigated for UWSNs for the first time in this paper. However, unlike 5G networks that operate in the licensed spectrum, UWSNs mostly operate in unlicensed spectrum where sensors also experience cross-technology interferences from other devices sharing the same spectrum. In this paper, we model the interferences from various sources at the sensors using stochastic geometry framework. To evaluate the performance, we derive a theorem and present new closed form expression for the outage probability of the sensors in a downlink scenario under interference limited environment. In addition, diversity analysis for the ordered NOMA users is performed. Based on the derived outage probability, we evaluate the average link throughput and energy consumption efficiency of NOMA against conventional orthogonal multiple access (OMA) technique in UWSNs. Further, the required computational complexity for the NOMA users is presented.

  5. Downlink Non-Orthogonal Multiple Access (NOMA) in Poisson Networks

    KAUST Repository

    Ali, Konpal S.; Haenggi, Martin; Elsawy, Hesham; Chaaban, Anas; Alouini, Mohamed-Slim

    2018-01-01

    A network model is considered where Poisson distributed base stations transmit to $N$ power-domain non-orthogonal multiple access (NOMA) users (UEs) each that employ successive interference cancellation (SIC) for decoding. We propose three models for the clustering of NOMA UEs and consider two different ordering techniques for the NOMA UEs: mean signal power-based and instantaneous signal-to-intercell-interference-and-noise-ratio-based. For each technique, we present a signal-to-interference-and-noise ratio analysis for the coverage of the typical UE. We plot the rate region for the two-user case and show that neither ordering technique is consistently superior to the other. We propose two efficient algorithms for finding a feasible resource allocation that maximize the cell sum rate $\\mathcal{R}_{\\rm tot}$, for general $N$, constrained to: 1) a minimum rate $\\mathcal{T}$ for each UE, 2) identical rates for all UEs. We show the existence of: 1) an optimum $N$ that maximizes the constrained $\\mathcal{R}_{\\rm tot}$ given a set of network parameters, 2) a critical SIC level necessary for NOMA to outperform orthogonal multiple access. The results highlight the importance in choosing the network parameters $N$, the constraints, and the ordering technique to balance the $\\mathcal{R}_{\\rm tot}$ and fairness requirements. We also show that interference-aware UE clustering can significantly improve performance.

  6. Virtualized Network Function Orchestration System and Experimental Network Based QR Recognition for a 5G Mobile Access Network

    Directory of Open Access Journals (Sweden)

    Misun Ahn

    2017-12-01

    Full Text Available This paper proposes a virtualized network function orchestration system based on Network Function Virtualization (NFV, one of the main technologies in 5G mobile networks. This system should provide connectivity between network devices and be able to create flexible network function and distribution. This system focuses more on access networks. By experimenting with various scenarios of user service established and activated in a network, we examine whether rapid adoption of new service is possible and whether network resources can be managed efficiently. The proposed method is based on Bluetooth transfer technology and mesh networking to provide automatic connections between network machines and on a Docker flat form, which is a container virtualization technology for setting and managing key functions. Additionally, the system includes a clustering and recovery measure regarding network function based on the Docker platform. We will briefly introduce the QR code perceived service as a user service to examine the proposal and based on this given service, we evaluate the function of the proposal and present analysis. Through the proposed approach, container relocation has been implemented according to a network device’s CPU usage and we confirm successful service through function evaluation on a real test bed. We estimate QR code recognition speed as the amount of network equipment is gradually increased, improving user service and confirm that the speed of recognition is increased as the assigned number of network devices is increased by the user service.

  7. Energy efficiency for cloud-radio access networks with imperfect channel state information

    KAUST Repository

    Al-Oquibi, Bayan; Amin, Osama; Dahrouj, Hayssam; Al-Naffouri, Tareq Y.; Alouini, Mohamed-Slim

    2016-01-01

    metric in next generation wireless systems (5G). Cloud radio access network (C-RAN), a promising 5G network architecture, provides an efficient framework for improving the EE performance, by means of coordinating the transmission across the network

  8. RNA FRABASE 2.0: an advanced web-accessible database with the capacity to search the three-dimensional fragments within RNA structures

    Directory of Open Access Journals (Sweden)

    Wasik Szymon

    2010-05-01

    Full Text Available Abstract Background Recent discoveries concerning novel functions of RNA, such as RNA interference, have contributed towards the growing importance of the field. In this respect, a deeper knowledge of complex three-dimensional RNA structures is essential to understand their new biological functions. A number of bioinformatic tools have been proposed to explore two major structural databases (PDB, NDB in order to analyze various aspects of RNA tertiary structures. One of these tools is RNA FRABASE 1.0, the first web-accessible database with an engine for automatic search of 3D fragments within PDB-derived RNA structures. This search is based upon the user-defined RNA secondary structure pattern. In this paper, we present and discuss RNA FRABASE 2.0. This second version of the system represents a major extension of this tool in terms of providing new data and a wide spectrum of novel functionalities. An intuitionally operated web server platform enables very fast user-tailored search of three-dimensional RNA fragments, their multi-parameter conformational analysis and visualization. Description RNA FRABASE 2.0 has stored information on 1565 PDB-deposited RNA structures, including all NMR models. The RNA FRABASE 2.0 search engine algorithms operate on the database of the RNA sequences and the new library of RNA secondary structures, coded in the dot-bracket format extended to hold multi-stranded structures and to cover residues whose coordinates are missing in the PDB files. The library of RNA secondary structures (and their graphics is made available. A high level of efficiency of the 3D search has been achieved by introducing novel tools to formulate advanced searching patterns and to screen highly populated tertiary structure elements. RNA FRABASE 2.0 also stores data and conformational parameters in order to provide "on the spot" structural filters to explore the three-dimensional RNA structures. An instant visualization of the 3D RNA

  9. Convergence of broadband optical and wireless access networks

    Science.gov (United States)

    Chang, Gee-Kung; Jia, Zhensheng; Chien, Hung-Chang; Chowdhury, Arshad; Hsueh, Yu-Ting; Yu, Jianjun

    2009-01-01

    This paper describes convergence of optical and wireless access networks for delivering high-bandwidth integrated services over optical fiber and air links. Several key system technologies are proposed and experimentally demonstrated. We report here, for the first ever, a campus-wide field trial demonstration of radio-over-fiber (RoF) system transmitting uncompressed standard-definition (SD) high-definition (HD) real-time video contents, carried by 2.4-GHz radio and 60- GHz millimeter-wave signals, respectively, over 2.5-km standard single mode fiber (SMF-28) through the campus fiber network at Georgia Institute of Technology (GT). In addition, subsystem technologies of Base Station and wireless tranceivers operated at 60 GHz for real-time video distribution have been developed and tested.

  10. Symmetric reconfigurable capacity assignment in a bidirectional DWDM access network.

    Science.gov (United States)

    Ortega, Beatriz; Mora, José; Puerto, Gustavo; Capmany, José

    2007-12-10

    This paper presents a novel architecture for DWDM bidirectional access networks providing symmetric dynamic capacity allocation for both downlink and uplink signals. A foldback arrayed waveguide grating incorporating an optical switch enables the experimental demonstration of flexible assignment of multiservice capacity. Different analog and digital services, such as CATV, 10 GHz-tone, 155Mb/s PRBS and UMTS signals have been transmitted in order to successfully test the system performance under different scenarios of total capacity distribution from the Central Station to different Base Stations with two reconfigurable extra channels for each down and upstream direction.

  11. A Spontaneous Ad Hoc Network to Share WWW Access

    Directory of Open Access Journals (Sweden)

    Lloret Jaime

    2010-01-01

    Full Text Available In this paper, we propose a secure spontaneous ad-hoc network, based on direct peer-to-peer interaction, to grant a quick, easy, and secure access to the users to surf the Web. The paper shows the description of our proposal, the procedure of the nodes involved in the system, the security algorithms implemented, and the designed messages. We have taken into account the security and its performance. Although some people have defined and described the main features of spontaneous ad-hoc networks, nobody has published any design and simulation until today. Spontaneous networking will enable a more natural form of wireless computing when people physically meet in the real world. We also validate the success of our proposal through several simulations and comparisons with a regular architecture, taking into account the optimization of the resources of the devices. Finally, we compare our proposal with other caching techniques published in the related literature. The proposal has been developed with the main objective of improving the communication and integration between different study centers of low-resource communities. That is, it lets communicate spontaneous networks, which are working collaboratively and which have been created on different physical places.

  12. Optical code-division multiple-access networks

    Science.gov (United States)

    Andonovic, Ivan; Huang, Wei

    1999-04-01

    This review details the approaches adopted to implement classical code division multiple access (CDMA) principles directly in the optical domain, resulting in all optical derivatives of electronic systems. There are a number of ways of realizing all-optical CDMA systems, classified as incoherent and coherent based on spreading in the time and frequency dimensions. The review covers the basic principles of optical CDMA (OCDMA), the nature of the codes used in these approaches and the resultant limitations on system performance with respect to the number of stations (code cardinality), the number of simultaneous users (correlation characteristics of the families of codes), concluding with consideration of network implementation issues. The latest developments will be presented with respect to the integration of conventional time spread codes, used in the bulk of the demonstrations of these networks to date, with wavelength division concepts, commonplace in optical networking. Similarly, implementations based on coherent correlation with the aid of a local oscillator will be detailed and comparisons between approaches will be drawn. Conclusions regarding the viability of these approaches allowing the goal of a large, asynchronous high capacity optical network to be realized will be made.

  13. RNA regulatory networks in animals and plants: a long noncoding RNA perspective.

    Science.gov (United States)

    Bai, Youhuang; Dai, Xiaozhuan; Harrison, Andrew P; Chen, Ming

    2015-03-01

    A recent highlight of genomics research has been the discovery of many families of transcripts which have function but do not code for proteins. An important group is long noncoding RNAs (lncRNAs), which are typically longer than 200 nt, and whose members originate from thousands of loci across genomes. We review progress in understanding the biogenesis and regulatory mechanisms of lncRNAs. We describe diverse computational and high throughput technologies for identifying and studying lncRNAs. We discuss the current knowledge of functional elements embedded in lncRNAs as well as insights into the lncRNA-based regulatory network in animals. We also describe genome-wide studies of large amount of lncRNAs in plants, as well as knowledge of selected plant lncRNAs with a focus on biotic/abiotic stress-responsive lncRNAs. © The Author 2014. Published by Oxford University Press. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  14. Construction and analysis of lncRNA-lncRNA synergistic networks to reveal clinically relevant lncRNAs in cancer.

    Science.gov (United States)

    Li, Yongsheng; Chen, Juan; Zhang, Jinwen; Wang, Zishan; Shao, Tingting; Jiang, Chunjie; Xu, Juan; Li, Xia

    2015-09-22

    Long non-coding RNAs (lncRNAs) play key roles in diverse biological processes. Moreover, the development and progression of cancer often involves the combined actions of several lncRNAs. Here we propose a multi-step method for constructing lncRNA-lncRNA functional synergistic networks (LFSNs) through co-regulation of functional modules having three features: common coexpressed genes of lncRNA pairs, enrichment in the same functional category and close proximity within protein interaction networks. Applied to three cancers, we constructed cancer-specific LFSNs and found that they exhibit a scale free and modular architecture. In addition, cancer-associated lncRNAs tend to be hubs and are enriched within modules. Although there is little synergistic pairing of lncRNAs across cancers, lncRNA pairs involved in the same cancer hallmarks by regulating same or different biological processes. Finally, we identify prognostic biomarkers within cancer lncRNA expression datasets using modules derived from LFSNs. In summary, this proof-of-principle study indicates synergistic lncRNA pairs can be identified through integrative analysis of genome-wide expression data sets and functional information.

  15. Enhancing Sensing and Channel Access in Cognitive Radio Networks

    KAUST Repository

    Hamza, Doha R.

    2014-06-18

    Cognitive radio technology is a promising technology to solve the wireless spectrum scarcity problem by intelligently allowing secondary, or unlicensed, users access to the primary, licensed, users\\' frequency bands. Cognitive technology involves two main tasks: 1) sensing the wireless medium to assess the presence of the primary users and 2) designing secondary spectrum access techniques that maximize the secondary users\\' benefits while maintaining the primary users\\' privileged status. On the spectrum sensing side, we make two contributions. First, we maximize a utility function representing the secondary throughput while constraining the collision probability with the primary below a certain value. We optimize therein the channel sensing time, the sensing decision threshold, the channel probing time, together with the channel sensing order for wideband primary channels. Second, we design a cooperative spectrum sensing technique termed sensing with equal gain combining whereby cognitive radios simultaneously transmit their sensing results to the fusion center over multipath fading reporting channels. The proposed scheme is shown to outperform orthogonal reporting systems in terms of achievable secondary throughput and to be robust against phase and synchronization errors. On the spectrum access side, we make four contributions. First, we design a secondary scheduling scheme with the goal of minimizing the secondary queueing delay under constraints on the average secondary transmit power and the maximum tolerable primary outage probability. Second, we design another secondary scheduling scheme based on the spectrum sensing results and the primary automatic repeat request feedback. The optimal medium access probabilities are obtained via maximizing the secondary throughput subject to constraints that guarantee quality of service parameters for the primary. Third, we propose a three-message superposition coding scheme to maximize the secondary throughput without

  16. Integration analysis of microRNA and mRNA paired expression profiling identifies deregulated microRNA-transcription factor-gene regulatory networks in ovarian endometriosis.

    Science.gov (United States)

    Zhao, Luyang; Gu, Chenglei; Ye, Mingxia; Zhang, Zhe; Li, Li'an; Fan, Wensheng; Meng, Yuanguang

    2018-01-22

    The etiology and pathophysiology of endometriosis remain unclear. Accumulating evidence suggests that aberrant microRNA (miRNA) and transcription factor (TF) expression may be involved in the pathogenesis and development of endometriosis. This study therefore aims to survey the key miRNAs, TFs and genes and further understand the mechanism of endometriosis. Paired expression profiling of miRNA and mRNA in ectopic endometria compared with eutopic endometria were determined by high-throughput sequencing techniques in eight patients with ovarian endometriosis. Binary interactions and circuits among the miRNAs, TFs, and corresponding genes were identified by the Pearson correlation coefficients. miRNA-TF-gene regulatory networks were constructed using bioinformatic methods. Eleven selected miRNAs and TFs were validated by quantitative reverse transcription-polymerase chain reaction in 22 patients. Overall, 107 differentially expressed miRNAs and 6112 differentially expressed mRNAs were identified by comparing the sequencing of the ectopic endometrium group and the eutopic endometrium group. The miRNA-TF-gene regulatory network consists of 22 miRNAs, 12 TFs and 430 corresponding genes. Specifically, some key regulators from the miR-449 and miR-34b/c cluster, miR-200 family, miR-106a-363 cluster, miR-182/183, FOX family, GATA family, and E2F family as well as CEBPA, SOX9 and HNF4A were suggested to play vital regulatory roles in the pathogenesis of endometriosis. Integration analysis of the miRNA and mRNA expression profiles presents a unique insight into the regulatory network of this enigmatic disorder and possibly provides clues regarding replacement therapy for endometriosis.

  17. Elucidating MicroRNA Regulatory Networks Using Transcriptional, Post-transcriptional, and Histone Modification Measurements

    Directory of Open Access Journals (Sweden)

    Sara J.C. Gosline

    2016-01-01

    Full Text Available MicroRNAs (miRNAs regulate diverse biological processes by repressing mRNAs, but their modest effects on direct targets, together with their participation in larger regulatory networks, make it challenging to delineate miRNA-mediated effects. Here, we describe an approach to characterizing miRNA-regulatory networks by systematically profiling transcriptional, post-transcriptional and epigenetic activity in a pair of isogenic murine fibroblast cell lines with and without Dicer expression. By RNA sequencing (RNA-seq and CLIP (crosslinking followed by immunoprecipitation sequencing (CLIP-seq, we found that most of the changes induced by global miRNA loss occur at the level of transcription. We then introduced a network modeling approach that integrated these data with epigenetic data to identify specific miRNA-regulated transcription factors that explain the impact of miRNA perturbation on gene expression. In total, we demonstrate that combining multiple genome-wide datasets spanning diverse regulatory modes enables accurate delineation of the downstream miRNA-regulated transcriptional network and establishes a model for studying similar networks in other systems.

  18. SON for LTE-WLAN access network selection : design and performance

    NARCIS (Netherlands)

    Willemen, P.; Laselva, D.; Wang, Y.; Kovács, I.; Djapic, R.; Moerman, I.

    2016-01-01

    Mobile network operators (MNOs) are deploying carrier-grade Wireless Local Area Network (WLAN) as an important complementary system to cellular networks. Access network selection (ANS) between cellular and WLAN is an essential component to improve network performance and user quality-of-service

  19. Performance of WLAN RSS-based SON for LTE/WLAN access network selection

    NARCIS (Netherlands)

    Wang, Y.; Djapic, R.; Bergström, A.; Kovács, I.Z.; Laselva, D.; Spaey, K.; Sas, B.

    2014-01-01

    Mobile Network Operators (MNOs) are integrating carrier-grade Wireless Local Area Network (WLAN) to cellular networks to improve network performance and user experience. Access network selection (ANS) between cellular and WLAN plays a key role in the integration. Given the complexity of

  20. Random access procedures and radio access network (RAN) overload control in standard and advanced long-term evolution (LTE and LTE-A) networks

    DEFF Research Database (Denmark)

    Kiilerich Pratas, Nuno; Thomsen, Henning; Popovski, Petar

    2015-01-01

    In this chapter, we describe and discuss the current LTE random access procedure and the Radio Access Network Load Control solution within LTE/LTE-A. We provide an overview of the several considered load control solutions and give a detailed description of the standardized Extended Access Class B...

  1. Software Defined Networking for Next Generation Converged Metro-Access Networks

    Science.gov (United States)

    Ruffini, M.; Slyne, F.; Bluemm, C.; Kitsuwan, N.; McGettrick, S.

    2015-12-01

    While the concept of Software Defined Networking (SDN) has seen a rapid deployment within the data center community, its adoption in telecommunications network has progressed slowly, although the concept has been swiftly adopted by all major telecoms vendors. This paper presents a control plane architecture for SDN-driven converged metro-access networks, developed through the DISCUS European FP7 project. The SDN-based controller architecture was developed in a testbed implementation targeting two main scenarios: fast feeder fiber protection over dual-homed Passive Optical Networks (PONs) and dynamic service provisioning over a multi-wavelength PON. Implementation details and results of the experiment carried out over the second scenario are reported in the paper, showing the potential of SDN in providing assured on-demand services to end-users.

  2. MicroRNA functional network in pancreatic cancer: From biology to ...

    Indian Academy of Sciences (India)

    [Wang J and Sen S 2011 MicroRNA functional network in pancreatic cancer: From biology to biomarkers of disease. ... growth factor type I receptor; INSR, insulin receptor; IPA, Ingenuity Pathway Analysis; IPMN, ..... Prostate cancer signalling.

  3. RNA binding protein RNPC1 inhibits breast cancer cells metastasis via activating STARD13-correlated ceRNA network.

    Science.gov (United States)

    Zhang, Zhiting; Guo, Qianqian; Zhang, Shufang; Xiang, Chenxi; Guo, Xinwei; Zhang, Feng; Gao, Lanlan; Ni, Haiwei; Xi, Tao; Zheng, Lufeng

    2018-05-07

    RNA binding proteins (RBPs) are pivotal post-transcriptional regulators. RNPC1, an RBP, acts as a tumor suppressor through binding and regulating the expression of target genes in cancer cells. This study disclosed that RNPC1 expression was positively correlated with breast cancer patients' relapse free and overall survival, and RNPC1suppressed breast cancer cells metastasis. Mechanistically, RNPC1 promoting a competing endogenous network (ceRNA) crosstalk between STARD13, CDH5, HOXD10, and HOXD1 (STARD13-correlated ceRNA network) that we previously confirmed in breast cancer cells through stabilizing the transcripts and thus facilitating the expression of these four genes in breast cancer cells. Furthermore, RNPC1 overexpression restrained the promotion of STARD13, CDH5, HOXD10, and HOXD1 knockdown on cell metastasis. Notably, RNPC1 expression was positively correlated with CDH5, HOXD1 and HOXD10 expression in breast cancer tissues, and attenuated adriamycin resistance. Taken together, these results identified that RNPC1 could inhibit breast cancer cells metastasis via promoting STARD13-correlated ceRNA network.

  4. Multirate IP traffic transmission in flexible access networks based on optical FFH-CDMA

    DEFF Research Database (Denmark)

    Raddo, Thiago R.; Sanches, Anderson L.; Tafur Monroy, Idelfonso

    2016-01-01

    In this paper, we propose a new IP transmission architecture over optical fast frequency hopping code-division multiple-access (OFFH-CDMA) network capable of supporting multirate transmissions for applications in flexible optical access networks. The proposed network architecture is independent...

  5. Competing endogenous RNA network analysis identifies critical genes among the different breast cancer subtypes.

    Science.gov (United States)

    Chen, Juan; Xu, Juan; Li, Yongsheng; Zhang, Jinwen; Chen, Hong; Lu, Jianping; Wang, Zishan; Zhao, Xueying; Xu, Kang; Li, Yixue; Li, Xia; Zhang, Yan

    2017-02-07

    Although competing endogenous RNAs (ceRNAs) have been implicated in many solid tumors, their roles in breast cancer subtypes are not well understood. We therefore generated a ceRNA network for each subtype based on the significance of both, positive co-expression and the shared miRNAs, in the corresponding subtype miRNA dys-regulatory network, which was constructed based on negative regulations between differentially expressed miRNAs and targets. All four subtype ceRNA networks exhibited scale-free architecture and showed that the common ceRNAs were at the core of the networks. Furthermore, the common ceRNA hubs had greater connectivity than the subtype-specific hubs. Functional analysis of the common subtype ceRNA hubs highlighted factors involved in proliferation, MAPK signaling pathways and tube morphogenesis. Subtype-specific ceRNA hubs highlighted unique subtype-specific pathways, like the estrogen response and inflammatory pathways in the luminal subtypes or the factors involved in the coagulation process that participates in the basal-like subtype. Ultimately, we identified 29 critical subtype-specific ceRNA hubs that characterized the different breast cancer subtypes. Our study thus provides new insight into the common and specific subtype ceRNA interactions that define the different categories of breast cancer and enhances our understanding of the pathology underlying the different breast cancer subtypes, which can have prognostic and therapeutic implications in the future.

  6. Optimizing Cooperative Cognitive Radio Networks with Opportunistic Access

    KAUST Repository

    Zafar, Ammar; Alouini, Mohamed-Slim; Chen, Yunfei; Radaydeh, Redha M.

    2012-01-01

    Optimal resource allocation for cooperative cognitive radio networks with opportunistic access to the licensed spectrum is studied. Resource allocation is based on minimizing the symbol error rate at the receiver. Both the cases of all-participate relaying and selective relaying are considered. The objective function is derived and the constraints are detailed for both scenarios. It is then shown that the objective functions and the constraints are nonlinear and nonconvex functions of the parameters of interest, that is, source and relay powers, symbol time, and sensing time. Therefore, it is difficult to obtain closed-form solutions for the optimal resource allocation. The optimization problem is then solved using numerical techniques. Numerical results show that the all-participate system provides better performance than its selection counterpart, at the cost of greater resources. © 2012 Ammar Zafar et al.

  7. Optimizing Cooperative Cognitive Radio Networks with Opportunistic Access

    KAUST Repository

    Zafar, Ammar

    2012-09-16

    Optimal resource allocation for cooperative cognitive radio networks with opportunistic access to the licensed spectrum is studied. Resource allocation is based on minimizing the symbol error rate at the receiver. Both the cases of all-participate relaying and selective relaying are considered. The objective function is derived and the constraints are detailed for both scenarios. It is then shown that the objective functions and the constraints are nonlinear and nonconvex functions of the parameters of interest, that is, source and relay powers, symbol time, and sensing time. Therefore, it is difficult to obtain closed-form solutions for the optimal resource allocation. The optimization problem is then solved using numerical techniques. Numerical results show that the all-participate system provides better performance than its selection counterpart, at the cost of greater resources. © 2012 Ammar Zafar et al.

  8. MPTCP Tunnel: An Architecture for Aggregating Bandwidth of Heterogeneous Access Networks

    Directory of Open Access Journals (Sweden)

    Xiaolan Liu

    2018-01-01

    Full Text Available Fixed and cellular networks are two typical access networks provided by operators. Fixed access network is widely employed; nevertheless, its bandwidth is sometimes not sufficient enough to meet user bandwidth requirements. Meanwhile, cellular access network owns unique advantages of wider coverage, faster increasing link speed, more flexible deployment, and so forth. Therefore, it is attractive for operators to mitigate the bandwidth shortage by bundling these two. Actually, there have been existing schemes proposed to aggregate the bandwidth of two access networks, whereas they all have their own problems, like packet reordering or extra latency overhead. To address this problem, we design new architecture, MPTCP Tunnel, to aggregate the bandwidth of multiple heterogeneous access networks from the perspective of operators. MPTCP Tunnel uses MPTCP, which solves the reordering problem essentially, to bundle multiple access networks. Besides, MPTCP Tunnel sets up only one MPTCP connection at play which adapts itself to multiple traffic types and TCP flows. Furthermore, MPTCP Tunnel forwards intact IP packets through access networks, maintaining the end-to-end TCP semantics. Experimental results manifest that MPTCP Tunnel can efficiently aggregate the bandwidth of multiple access networks and is more adaptable to the increasing heterogeneity of access networks than existing mechanisms.

  9. Parameter optimization for constructing competing endogenous RNA regulatory network in glioblastoma multiforme and other cancers.

    Science.gov (United States)

    Chiu, Yu-Chiao; Hsiao, Tzu-Hung; Chen, Yidong; Chuang, Eric Y

    2015-01-01

    In addition to direct targeting and repressing mRNAs, recent studies reported that microRNAs (miRNAs) can bridge up an alternative layer of post-transcriptional gene regulatory networks. The competing endogenous RNA (ceRNA) regulation depicts the scenario where pairs of genes (ceRNAs) sharing, fully or partially, common binding miRNAs (miRNA program) can establish coexpression through competition for a limited pool of the miRNA program. While the dynamics of ceRNA regulation among cellular conditions have been verified based on in silico and in vitro experiments, comprehensive investigation into the strength of ceRNA regulation in human datasets remains largely unexplored. Furthermore, pan-cancer analysis of ceRNA regulation, to our knowledge, has not been systematically investigated. In the present study we explored optimal conditions for ceRNA regulation, investigated functions governed by ceRNA regulation, and evaluated pan-cancer effects. We started by investigating how essential factors, such as the size of miRNA programs, the number of miRNA program binding sites, and expression levels of miRNA programs and ceRNAs affect the ceRNA regulation capacity in tumors derived from glioblastoma multiforme patients captured by The Cancer Genome Atlas (TCGA). We demonstrated that increased numbers of common targeting miRNAs as well as the abundance of binding sites enhance ceRNA regulation and strengthen coexpression of ceRNA pairs. Also, our investigation revealed that the strength of ceRNA regulation is dependent on expression levels of both miRNA programs and ceRNAs. Through functional annotation analysis, our results indicated that ceRNA regulation is highly associated with essential cellular functions and diseases including cancer. Furthermore, the highly intertwined ceRNA regulatory relationship enables constitutive and effective intra-function regulation of genes in diverse types of cancer. Using gene and microRNA expression datasets from TCGA, we successfully

  10. Step-by-Step Construction of Gene Co-expression Networks from High-Throughput Arabidopsis RNA Sequencing Data.

    Science.gov (United States)

    Contreras-López, Orlando; Moyano, Tomás C; Soto, Daniela C; Gutiérrez, Rodrigo A

    2018-01-01

    The rapid increase in the availability of transcriptomics data generated by RNA sequencing represents both a challenge and an opportunity for biologists without bioinformatics training. The challenge is handling, integrating, and interpreting these data sets. The opportunity is to use this information to generate testable hypothesis to understand molecular mechanisms controlling gene expression and biological processes (Fig. 1). A successful strategy to generate tractable hypotheses from transcriptomics data has been to build undirected network graphs based on patterns of gene co-expression. Many examples of new hypothesis derived from network analyses can be found in the literature, spanning different organisms including plants and specific fields such as root developmental biology.In order to make the process of constructing a gene co-expression network more accessible to biologists, here we provide step-by-step instructions using published RNA-seq experimental data obtained from a public database. Similar strategies have been used in previous studies to advance root developmental biology. This guide includes basic instructions for the operation of widely used open source platforms such as Bio-Linux, R, and Cytoscape. Even though the data we used in this example was obtained from Arabidopsis thaliana, the workflow developed in this guide can be easily adapted to work with RNA-seq data from any organism.

  11. Opportunistic Nonorthogonal Packet Scheduling in Fixed Broadband Wireless Access Networks

    Directory of Open Access Journals (Sweden)

    Ahmed Mohamed H

    2006-01-01

    Full Text Available In order to mitigate high cochannel interference resulting from dense channel reuse, the interference management issues are often considered as essential part of scheduling schemes in fixed broadband wireless access (FBWA networks. To that end, a series of literature has been published recently, in which a group of base stations forms an interferer group (downlink transmissions from each base station become dominant interference for the users in other in-group base stations, and the scheduling scheme deployed in the group allows only one base station to transmit at a time. As a result of time orthogonality in transmissions, the dominant cochannel interferers are prevented, and hence the packet error rate can be improved. However, prohibiting concurrent transmissions in these orthogonal schemes introduces throughput penalty as well as higher end-to-end packet delay which might not be desirable for real-time services. In this paper, we utilize opportunistic nonorthogonality among the in-group transmissions whenever possible and propose a novel transmission scheduling scheme for FBWA networks. The proposed scheme, in contrast to the proactive interference avoidance techniques, strives for the improvements in delay and throughput efficiency. To facilitate opportunistic nonorthogonal transmissions in the interferer group, estimation of signal-to-interference-plus-noise ratio (SINR is required at the scheduler. We have observed from simulations that the proposed scheme outperforms the reference orthogonal scheme in terms of spectral efficiency, mean packet delay, and packet dropping rate.

  12. Optical CDMA and WDMA in the access network

    Science.gov (United States)

    Sargent, Edward H.; Stok, Andrew

    2003-08-01

    Optical CDMA provides one avenue to sharing the vast bandwidth of optical fiber among a number of active users in a network. In this work we address two questions central to considering the areas of applicability of CDMA in optics: (1) How do we compare fairly optical CDMA codes of different families, and what do we conclude? (2) How do we compare optical CDMA performance with that of conventional optical WDMA? To answer the first question, we present a method of comparing optical CDMA codes of different families, sizes and weights. We outline why the traditional performance metric of bit-error rate versus number of simultaneous users is lacking and propose a different performance measure -- the peak throughput normalized with respect to the size of the code. This metric is used to show that optical-orthogonal codes (OOCs) with a weight of 4 perform best at low offered loads while OOCs with weight 5 should be used at higher offered loads. By applying the technique across different families of codes, we demonstrate that multi-wavelength OOCs (MWOOCs) perform better than both OOCs (by a factor of approximately 1.25) and asymmetric prime-hop codes (by a factor of approximately 3.5), over a wide range of offered loads. In answer to the second question, we present a comparison of the performance of optical code-division multiple-access (CDMA) systems with that of a wavelength-division multiple-access (WDMA) system. The multiple-access techniques are applied in a time-slotted broadcast local-area network. The utilization, defined as the throughput per unit of time-domain bandwidth expansion, and packet delay are used as metrics of performance. When more than seven wavelengths are available, optical CDMA systems using asymmetric prime-hop codes and all-optical signal processing are shown to have higher peak utilization and lower corresponding delay than a WDMA system with the same number of wavelengths. When the encoders/decoders operate at the chip rate, the utilization

  13. The Effect of Information Access Strategy on Power Consumption and Reliability in Wireless Sensor Network

    DEFF Research Database (Denmark)

    Tobgay, Sonam; Olsen, Rasmus Løvenstein; Prasad, Ramjee

    2013-01-01

    This paper examines the effect of different information access strategies on power consumption and information reliability, considering the wireless sensor network as the source of information. Basically, the paper explores three different access strategies, namely; reactive, periodic and hybrid...

  14. Switched-based interference reduction scheme for open-access overlaid cellular networks

    KAUST Repository

    Radaydeh, Redha Mahmoud Mesleh; Alouini, Mohamed-Slim

    2012-01-01

    coordination between access points is infeasible. This paper targets interference management in such overlaid networks. It is assumed that the femtocells employ the open-access strategy to reduce cross-tier interference, and can share resources concurrently

  15. Failure Analysis of Network Based Accessible Pedestrian Signals in Closed-Loop Operation

    Science.gov (United States)

    2011-03-01

    The potential failure modes of a network based accessible pedestrian system were analyzed to determine the limitations and benefits of closed-loop operation. The vulnerabilities of the system are accessed using the industry standard process known as ...

  16. Graphical representation of ribosomal RNA probe accessibility data using ARB software package

    Directory of Open Access Journals (Sweden)

    Amann Rudolf

    2005-03-01

    Full Text Available Abstract Background Taxon specific hybridization probes in combination with a variety of commonly used hybridization formats nowadays are standard tools in microbial identification. A frequently applied technology, fluorescence in situ hybridization (FISH, besides single cell identification, allows the localization and functional studies of the microbial community composition. Careful in silico design and evaluation of potential oligonucleotide probe targets is therefore crucial for performing successful hybridization experiments. Results The PROBE Design tools of the ARB software package take into consideration several criteria such as number, position and quality of diagnostic sequence differences while designing oligonucleotide probes. Additionally, new visualization tools were developed to enable the user to easily examine further sequence associated criteria such as higher order structure, conservation, G+C content, transition-transversion profiles and in situ target accessibility patterns. The different types of sequence associated information (SAI can be visualized by user defined background colors within the ARB primary and secondary structure editors as well as in the PROBE Match tool. Conclusion Using this tool, in silico probe design and evaluation can be performed with respect to in situ probe accessibility data. The evaluation of proposed probe targets with respect to higher-order rRNA structure is of importance for successful design and performance of in situ hybridization experiments. The entire ARB software package along with the probe accessibility data is available from the ARB home page http://www.arb-home.de.

  17. Coordinated scheduling for the downlink of cloud radio-access networks

    KAUST Repository

    Douik, Ahmed S.; Dahrouj, Hayssam; Al-Naffouri, Tareq Y.; Alouini, Mohamed-Slim

    2015-01-01

    This paper addresses the coordinated scheduling problem in cloud-enabled networks. Consider the downlink of a cloud-radio access network (CRAN), where the cloud is only responsible for the scheduling policy and the synchronization of the transmit

  18. Voice over LTE via Generic access (Volga) as a possible solution of mobile networks transformation

    OpenAIRE

    Stepaniuk, Oleg

    2010-01-01

    This paper is focused on Voice over LTE via Generic Access Network, which concept is to connect the already existing Mobile Switching Centers to the LTE network via a gateway supporting 2G or 3G voice environment.

  19. Guidance for RNA-seq co-expression network construction and analysis: safety in numbers.

    Science.gov (United States)

    Ballouz, S; Verleyen, W; Gillis, J

    2015-07-01

    RNA-seq co-expression analysis is in its infancy and reasonable practices remain poorly defined. We assessed a variety of RNA-seq expression data to determine factors affecting functional connectivity and topology in co-expression networks. We examine RNA-seq co-expression data generated from 1970 RNA-seq samples using a Guilt-By-Association framework, in which genes are assessed for the tendency of co-expression to reflect shared function. Minimal experimental criteria to obtain performance on par with microarrays were >20 samples with read depth >10 M per sample. While the aggregate network constructed shows good performance (area under the receiver operator characteristic curve ∼0.71), the dependency on number of experiments used is nearly identical to that present in microarrays, suggesting thousands of samples are required to obtain 'gold-standard' co-expression. We find a major topological difference between RNA-seq and microarray co-expression in the form of low overlaps between hub-like genes from each network due to changes in the correlation of expression noise within each technology. jgillis@cshl.edu or sballouz@cshl.edu Networks are available at: http://gillislab.labsites.cshl.edu/supplements/rna-seq-networks/ and supplementary data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  20. Integration of QoS provisioning in home and access networks

    DEFF Research Database (Denmark)

    Popov, Mikhail; Gavler, A.; Sköldström, P.

    2010-01-01

    Approaches for QoS provisioning using UPnP for home networks and GMPLS for access networks are described. A solution for interworking the UPnP and the GMPLS at the residential gateway is proposed.......Approaches for QoS provisioning using UPnP for home networks and GMPLS for access networks are described. A solution for interworking the UPnP and the GMPLS at the residential gateway is proposed....

  1. MicroRNA-mediated networks underlie immune response regulation in papillary thyroid carcinoma

    Science.gov (United States)

    Huang, Chen-Tsung; Oyang, Yen-Jen; Huang, Hsuan-Cheng; Juan, Hsueh-Fen

    2014-09-01

    Papillary thyroid carcinoma (PTC) is a common endocrine malignancy with low death rate but increased incidence and recurrence in recent years. MicroRNAs (miRNAs) are small non-coding RNAs with diverse regulatory capacities in eukaryotes and have been frequently implied in human cancer. Despite current progress, however, a panoramic overview concerning miRNA regulatory networks in PTC is still lacking. Here, we analyzed the expression datasets of PTC from The Cancer Genome Atlas (TCGA) Data Portal and demonstrate for the first time that immune responses are significantly enriched and under specific regulation in the direct miRNA-target network among distinctive PTC variants to different extents. Additionally, considering the unconventional properties of miRNAs, we explore the protein-coding competing endogenous RNA (ceRNA) and the modulatory networks in PTC and unexpectedly disclose concerted regulation of immune responses from these networks. Interestingly, miRNAs from these conventional and unconventional networks share general similarities and differences but tend to be disparate as regulatory activities increase, coordinately tuning the immune responses that in part account for PTC tumor biology. Together, our systematic results uncover the intensive regulation of immune responses underlain by miRNA-mediated networks in PTC, opening up new avenues in the management of thyroid cancer.

  2. Genome-wide profiling of the PIWI-interacting RNA-mRNA regulatory networks in epithelial ovarian cancers.

    Science.gov (United States)

    Singh, Garima; Roy, Jyoti; Rout, Pratiti; Mallick, Bibekanand

    2018-01-01

    PIWI-interacting (piRNAs), ~23-36 nucleotide-long small non-coding RNAs (sncRNAs), earlier believed to be germline-specific, have now been identified in somatic cells, including cancer cells. These sncRNAs impact critical biological processes by fine-tuning gene expression at post-transcriptional and epigenetic levels. The expression of piRNAs in ovarian cancer, the most lethal gynecologic cancer is largely uncharted. In this study, we investigated the expression of PIWILs by qRT-PCR and western blotting and then identified piRNA transcriptomes in tissues of normal ovary and two most prevalent epithelial ovarian cancer subtypes, serous and endometrioid by small RNA sequencing. We detected 219, 256 and 234 piRNAs in normal ovary, endometrioid and serous ovarian cancer samples respectively. We observed piRNAs are encoded from various genomic regions, among which introns harbor the majority of them. Surprisingly, piRNAs originated from different genomic contexts showed the varied level of conservations across vertebrates. The functional analysis of predicted targets of differentially expressed piRNAs revealed these could modulate key processes and pathways involved in ovarian oncogenesis. Our study provides the first comprehensive piRNA landscape in these samples and a useful resource for further functional studies to decipher new mechanistic views of piRNA-mediated gene regulatory networks affecting ovarian oncogenesis. The RNA-seq data is submitted to GEO database (GSE83794).

  3. The design and implementation of access control management system in IHEP network

    International Nuclear Information System (INIS)

    Wang Yanming; An Dehai; Qi Fazhi

    2010-01-01

    In campus network environment of Institute of High Energy Physics, because of the number of Network devices and computers are large scale, ensuring the access validity of network devices and user's computer, and aiming at effective control the exceptional network communication are technological means to achieve network normal running. The access control system of Campus network of institute of High Energy Physics using MySQL database in the behind, and using CGI PHP HTML language to develop the front interface. The System achieves user information management, user computer access control, cutting down the exceptional network communication and alarm function. Increasing the management effective of network, to ensure campus network safety and reliable running. (authors)

  4. Access pricing for transmission networks: Hypotheses and empirical evidence

    Energy Technology Data Exchange (ETDEWEB)

    Martoccia, Maria [Decision Technology Centre, London (United Kingdom)

    1999-08-01

    The sectors characterised by the use of transmission or transport networks as inputs of production (electricity, gas, telecommunications) have long been considered as natural monopolies. Thanks to the technological innovations which have modified the economics of production (as in electricity generation) or that have driven the development of high value added services (as in telecommunications), the boundaries of the old natural monopolies have been eroded by the presence of operators potentially able to compete in national and international markets. The objective is to delineate, by analysing the more significant theoretical contributions and some of the restructuring experiences of the sector in question, the possible regulatory solutions which, in the perspective of a `European market` for electricity, makes the management and the expansion of the transmission networks adequate for the `open access` of national electricity sectors. The analysis of some mature experiences, such as in Chile, Argentina, the UK and Norway, in the second section, will offer a useful support to this evaluation. The regulatory solution here adopted will be analysed, in particular, with reference to the two main problems outlined above: on the one hand, the problem of providing through prices the necessary information about the opportunities of using the transmission assets; and on the other hand, the problem of defining an efficient incentive mechanism for the behaviour of the monopolist (the owner of the transmission assets). Finally, by considering the limits found in the solutions explored in these models, we will try, in the third section, to delineate the evolution that the regulation of the analysed sectors could follow, in an attempt to make the optimal solution defined in the first section consistent with the imperfections of the real scenarios. (EHS)

  5. RNA.

    Science.gov (United States)

    Darnell, James E., Jr.

    1985-01-01

    Ribonucleic acid (RNA) converts genetic information into protein and usually must be processed to serve its function. RNA types, chemical structure, protein synthesis, translation, manufacture, and processing are discussed. Concludes that the first genes might have been spliced RNA and that humans might be closer than bacteria to primitive…

  6. Construction and analysis of circular RNA molecular regulatory networks in liver cancer.

    Science.gov (United States)

    Ren, Shuangchun; Xin, Zhuoyuan; Xu, Yinyan; Xu, Jianting; Wang, Guoqing

    2017-01-01

    Liver cancer is the sixth most prevalent cancer, and the third most frequent cause of cancer-related deaths. Circular RNAs (circRNAs), a kind of special endogenous ncRNAs, have been coming back to the forefront of cancer genomics research. In this study, we used a systems biology approach to construct and analyze the circRNA molecular regulatory networks in the context of liver cancer. We detected a total of 127 differentially expressed circRNAs and 3,235 differentially expressed mRNAs. We selected the top-5 upregulated circRNAs to construct a circRNA-miRNA-mRNA network. We enriched the pathways and gene ontology items and determined their participation in cancer-related pathways such as p53 signaling pathway and pathways involved in angiogenesis and cell cycle. Quantitative real-time PCR was performed to verify the top-five circRNAs. ROC analysis showed circZFR, circFUT8, circIPO11 could significantly distinguish the cancer samples, with an AUC of 0.7069, 0.7575, and 0.7103, respectively. Our results suggest the circRNA-miRNA-mRNA network may help us further understand the molecular mechanisms of tumor progression in liver cancer, and reveal novel biomarkers and therapeutic targets.

  7. A Conserved Target Site in HIV-1 Gag RNA is Accessible to Inhibition by Both an HDV Ribozyme and a Short Hairpin RNA

    Directory of Open Access Journals (Sweden)

    Robert J Scarborough

    2014-01-01

    Full Text Available Antisense-based molecules targeting HIV-1 RNA have the potential to be used as part of gene or drug therapy to treat HIV-1 infection. In this study, HIV-1 RNA was screened to identify more conserved and accessible target sites for ribozymes based on the hepatitis delta virus motif. Using a quantitative screen for effects on HIV-1 production, we identified a ribozyme targeting a highly conserved site in the Gag coding sequence with improved inhibitory potential compared to our previously described candidates targeting the overlapping Tat/Rev coding sequence. We also demonstrate that this target site is highly accessible to short hairpin directed RNA interference, suggesting that it may be available for the binding of antisense RNAs with different modes of action. We provide evidence that this target site is structurally conserved in diverse viral strains and that it is sufficiently different from the human transcriptome to limit off-target effects from antisense therapies. We also show that the modified hepatitis delta virus ribozyme is more sensitive to a mismatch in its target site compared to the short hairpin RNA. Overall, our results validate the potential of a new target site in HIV-1 RNA to be used for the development of antisense therapies.

  8. Quantitative analysis of access strategies to remote information in network services

    DEFF Research Database (Denmark)

    Olsen, Rasmus Løvenstein; Schwefel, Hans-Peter; Hansen, Martin Bøgsted

    2006-01-01

    Remote access to dynamically changing information elements is a required functionality for various network services, including routing and instances of context-sensitive networking. Three fundamentally different strategies for such access are investigated in this paper: (1) a reactive approach in...

  9. Hierarchical micro-mobility management in high-speed multihop access networks

    Institute of Scientific and Technical Information of China (English)

    TANG Bi-hua; MA Xiao-lei; LIU Yuan-an; GAO Jin-chun

    2006-01-01

    This article integrates the hierarchical micro-mobility management and the high-speed multihop access networks (HMAN), to accomplish the smooth handover between different access routers. The proposed soft handover scheme in the high-speed HMAN can solve the micro-mobility management problem in the access network. This article also proposes the hybrid access router (AR) advertisement scheme and AR selection algorithm, which uses the time delay and stable route to the AR as the gateway selection parameters. By simulation, the proposed micro-mobility management scheme can achieve high packet delivery fraction and improve the lifetime of network.

  10. Predicting gene regulatory networks of soybean nodulation from RNA-Seq transcriptome data.

    Science.gov (United States)

    Zhu, Mingzhu; Dahmen, Jeremy L; Stacey, Gary; Cheng, Jianlin

    2013-09-22

    High-throughput RNA sequencing (RNA-Seq) is a revolutionary technique to study the transcriptome of a cell under various conditions at a systems level. Despite the wide application of RNA-Seq techniques to generate experimental data in the last few years, few computational methods are available to analyze this huge amount of transcription data. The computational methods for constructing gene regulatory networks from RNA-Seq expression data of hundreds or even thousands of genes are particularly lacking and urgently needed. We developed an automated bioinformatics method to predict gene regulatory networks from the quantitative expression values of differentially expressed genes based on RNA-Seq transcriptome data of a cell in different stages and conditions, integrating transcriptional, genomic and gene function data. We applied the method to the RNA-Seq transcriptome data generated for soybean root hair cells in three different development stages of nodulation after rhizobium infection. The method predicted a soybean nodulation-related gene regulatory network consisting of 10 regulatory modules common for all three stages, and 24, 49 and 70 modules separately for the first, second and third stage, each containing both a group of co-expressed genes and several transcription factors collaboratively controlling their expression under different conditions. 8 of 10 common regulatory modules were validated by at least two kinds of validations, such as independent DNA binding motif analysis, gene function enrichment test, and previous experimental data in the literature. We developed a computational method to reliably reconstruct gene regulatory networks from RNA-Seq transcriptome data. The method can generate valuable hypotheses for interpreting biological data and designing biological experiments such as ChIP-Seq, RNA interference, and yeast two hybrid experiments.

  11. Access regulation in the next generation access network environment: A comparative study of Hong Kong and Singapore from the transaction cost economics perspectives

    OpenAIRE

    Ho, Au Man

    2012-01-01

    Hong Kong and Singapore have adopted two different models in the regulation of the next generation access (NGA) networks. In Hong Kong, the government has decided that access regulation will not be applied to fibre-based access networks and its strategy will be to rely on facilities-based competition to promote investment in the NGA networks. Singapore, on the other hand, has promoted access/services-based competition over a next generation broadband infrastructure subsidised by public fundin...

  12. Cell Deployment Optimization for Cloud Radio Access Networks using Teletraffic Theory

    DEFF Research Database (Denmark)

    Popovska Avramova, Andrijana; Christiansen, Henrik Lehrmann; Iversen, Villy Bæk

    2015-01-01

    Cloud Radio Access Network (C-RAN) is a new mobile radio access network design based on centralized and pooled processing. It offers potential cost savings by utilizing the so-called tidal effect due to user mobility in cellular networks. This paper provides a quantitative analysis...... to dynamically re-assign cells to a pool of baseband units. The re-assignment is based on the cell load and traffic characteristics such that effective utilization of the baseband resources is assured....

  13. Formal Specification and Validation of Secure Connection Establishment in a Generic Access Network Scenario

    DEFF Research Database (Denmark)

    Fleischer, Paul; Kristensen, Lars Michael

    2008-01-01

    The Generic Access Network (GAN) architecture is defined by the 3rd Generation Partnership Project (3GPP), and allows telephone services, such as SMS and voice-calls, to be accessed via generic IP networks. The main usage of this is to allow mobile phones to use WiFi in addition to the usual GSM...... network. The GAN specification relies on the Internet Protocol Security layer (IPSec) and the Internet Key Exchange protocol (IKEv2) to provide encryption across IP networks, and thus avoid compromising the security of the telephone networks. The detailed usage of these two Internet protocols (IPSec...

  14. Stochastic geometry model for multi-channel fog radio access networks

    KAUST Repository

    Emara, Mostafa; Elsawy, Hesham; Sorour, Sameh; Al-Ghadhban, Samir; Alouini, Mohamed-Slim; Al-Naffouri, Tareq Y.

    2017-01-01

    Cache-enabled base station (BS) densification, denoted as a fog radio access network (F-RAN), is foreseen as a key component of 5G cellular networks. F-RAN enables storing popular files at the network edge (i.e., BS caches), which empowers local

  15. Design Aspects of An Energy-Efficient, Lightweight Medium Access Control Protocol for Wireless Sensor Networks

    NARCIS (Netherlands)

    van Hoesel, L.F.W.; Havinga, Paul J.M.

    2006-01-01

    This document gives an overview of the most relevant design aspects of the lightweight medium access control (LMAC) protocol [16] for wireless sensor networks (WSNs). These aspects include selfconfiguring and localized operation of the protocol, time synchronization in multi-hop networks, network

  16. Models for QoS-Aware Capacity Management in Cable Access Networks

    NARCIS (Netherlands)

    Attema, T.; van den Berg, Hans Leo; Kempker, P.C.; Worm, D.; van der Vliet-Hameeteman, C.

    In this article, mathematical models are presented that “map‿ measured or predicted network utilisations to user throughputs for given network configurations (segment capacity, subscription speeds etc.). They provide valuable insights into the user experience in cable access networks. The models,

  17. Self-management for unified heterogeneous radio access networks

    NARCIS (Netherlands)

    Litjens, R.; Gunnarsson, F.; Sayrac, B.; Spaey, K.; Willcock, C.; Eisenblätter, A.; Rodríguez, B.G.; Kürner, T.

    2013-01-01

    The development of self-management solutions for (multi-technology, multi-layer) mobile communication networks is driven by their increasing operational complexity. Initial stand-alone SON (Self-Organizing Networks) solutions are already available, but are not sufficient to handle the networks of

  18. Biomarker MicroRNAs for Diagnosis of Oral Squamous Cell Carcinoma Identified Based on Gene Expression Data and MicroRNA-mRNA Network Analysis

    Science.gov (United States)

    Zhang, Hui; Li, Tangxin; Zheng, Linqing

    2017-01-01

    Oral squamous cell carcinoma is one of the most malignant tumors with high mortality rate worldwide. Biomarker discovery is critical for early diagnosis and precision treatment of this disease. MicroRNAs are small noncoding RNA molecules which often regulate essential biological processes and are good candidates for biomarkers. By integrative analysis of both the cancer-associated gene expression data and microRNA-mRNA network, miR-148b-3p, miR-629-3p, miR-27a-3p, and miR-142-3p were screened as novel diagnostic biomarkers for oral squamous cell carcinoma based on their unique regulatory abilities in the network structure of the conditional microRNA-mRNA network and their important functions. These findings were confirmed by literature verification and functional enrichment analysis. Future experimental validation is expected for the further investigation of their molecular mechanisms. PMID:29098014

  19. Allocation of spectral and spatial modes in multidimensional metro-access optical networks

    Science.gov (United States)

    Gao, Wenbo; Cvijetic, Milorad

    2018-04-01

    Introduction of spatial division multiplexing (SDM) has added a new dimension in an effort to increase optical fiber channel capacity. At the same time, it can also be explored as an advanced optical networking tool. In this paper, we have investigated the resource allocation to end-users in multidimensional networking structure with plurality of spectral and spatial modes actively deployed in different networking segments. This presents a more comprehensive method as compared to the common practice where the segments of optical network are analyzed independently since the interaction between network hierarchies is included into consideration. We explored the possible transparency from the metro/core network to the optical access network, analyzed the potential bottlenecks from the network architecture perspective, and identified an optimized network structure. In our considerations, the viability of optical grooming through the entire hierarchical all-optical network is investigated by evaluating the effective utilization and spectral efficiency of the network architecture.

  20. Hierarchy Bayesian model based services awareness of high-speed optical access networks

    Science.gov (United States)

    Bai, Hui-feng

    2018-03-01

    As the speed of optical access networks soars with ever increasing multiple services, the service-supporting ability of optical access networks suffers greatly from the shortage of service awareness. Aiming to solve this problem, a hierarchy Bayesian model based services awareness mechanism is proposed for high-speed optical access networks. This approach builds a so-called hierarchy Bayesian model, according to the structure of typical optical access networks. Moreover, the proposed scheme is able to conduct simple services awareness operation in each optical network unit (ONU) and to perform complex services awareness from the whole view of system in optical line terminal (OLT). Simulation results show that the proposed scheme is able to achieve better quality of services (QoS), in terms of packet loss rate and time delay.

  1. Algorithmic PON/P2P FTTH Access Network Design for CAPEX Minimization

    DEFF Research Database (Denmark)

    Papaefthimiou, Kostantinos; Tefera, Yonas; Mihylov, Dimitar

    2013-01-01

    one. It provides an obvious advantage for the end users in terms of high achievable data rates. On the other hand, the high initial deployment cost required exists as the heaviest impediment. The main goal of this paper is to study different approaches when designing a fiber access network. More......Due to the emergence of high bandwidth-requiring services, telecommunication operators (telcos) are called to upgrade their fixed access network. In order to keep up with the competition, they must consider different optical access network solutions with Fiber To The Home (FTTH) as the prevailing...

  2. Uncovering the liver’s role in immunity through RNA co-expression networks

    Czech Academy of Sciences Publication Activity Database

    Harrall, K. K.; Kechris, K. J.; Tabakoff, B.; Hoffman, P.L.; Hines, L. M.; Tsukamoto, H.; Pravenec, Michal; Printz, M.; Saba, L. M.

    2016-01-01

    Roč. 27, 9-10 (2016), s. 469-484 ISSN 0938-8990 R&D Projects: GA ČR(CZ) GAP301/12/0696 Institutional support: RVO:67985823 Keywords : RNA coexpression networks * liver * immunity * rat * recombinant inbred strains Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 2.509, year: 2016

  3. A Hierarchical Poisson Log-Normal Model for Network Inference from RNA Sequencing Data

    Science.gov (United States)

    Gallopin, Mélina; Rau, Andrea; Jaffrézic, Florence

    2013-01-01

    Gene network inference from transcriptomic data is an important methodological challenge and a key aspect of systems biology. Although several methods have been proposed to infer networks from microarray data, there is a need for inference methods able to model RNA-seq data, which are count-based and highly variable. In this work we propose a hierarchical Poisson log-normal model with a Lasso penalty to infer gene networks from RNA-seq data; this model has the advantage of directly modelling discrete data and accounting for inter-sample variance larger than the sample mean. Using real microRNA-seq data from breast cancer tumors and simulations, we compare this method to a regularized Gaussian graphical model on log-transformed data, and a Poisson log-linear graphical model with a Lasso penalty on power-transformed data. For data simulated with large inter-sample dispersion, the proposed model performs better than the other methods in terms of sensitivity, specificity and area under the ROC curve. These results show the necessity of methods specifically designed for gene network inference from RNA-seq data. PMID:24147011

  4. Design mobile satellite system architecture as an integral part of the cellular access digital network

    Science.gov (United States)

    Chien, E. S. K.; Marinho, J. A.; Russell, J. E., Sr.

    1988-01-01

    The Cellular Access Digital Network (CADN) is the access vehicle through which cellular technology is brought into the mainstream of the evolving integrated telecommunications network. Beyond the integrated end-to-end digital access and per call network services provisioning of the Integrated Services Digital Network (ISDN), the CADN engenders the added capability of mobility freedom via wireless access. One key element of the CADN network architecture is the standard user to network interface that is independent of RF transmission technology. Since the Mobile Satellite System (MSS) is envisioned to not only complement but also enhance the capabilities of the terrestrial cellular telecommunications network, compatibility and interoperability between terrestrial cellular and mobile satellite systems are vitally important to provide an integrated moving telecommunications network of the future. From a network standpoint, there exist very strong commonalities between the terrestrial cellular system and the mobile satellite system. Therefore, the MSS architecture should be designed as an integral part of the CADN. This paper describes the concept of the CADN, the functional architecture of the MSS, and the user-network interface signaling protocols.

  5. The Design of Passive Optical Networking+Ethernet over Coaxial Cable Access Networking and Video-on-Demand Services Carrying

    Science.gov (United States)

    Ji, Wei

    2013-07-01

    Video on demand is a very attractive service used for entertainment, education, and other purposes. The design of passive optical networking+Ethernet over coaxial cable accessing and a home gateway system is proposed. The network integrates the passive optical networking and Ethernet over coaxial cable to provide high dedicated bandwidth for the metropolitan video-on-demand services. Using digital video broadcasting, IP television protocol, unicasting, and broadcasting mechanisms maximizes the system throughput. The home gateway finishes radio frequency signal receiving and provides three kinds of interfaces for high-definition video, voice, and data, which achieves triple-play and wire/wireless access synchronously.

  6. Caching and Network Coding for Smart Radio Access

    NARCIS (Netherlands)

    Serbetci, Berksan

    2018-01-01

    The current generation has undoubtedly been witnessing a revolution of wireless network technologies in recent decades. First of all, there has been an enormous growth of wireless user equipments and network infrastructures in terms of both number and variety. Moreover, data traffic over wireless

  7. Enhancing Sensing and Channel Access in Cognitive Radio Networks

    KAUST Repository

    Hamza, Doha R.

    2014-01-01

    relaying is employed as an incentive for the primary network. The scheme is shown to outperform a number of reference schemes such as best relay selection. Finally, we consider a network of multiple primary and secondary users. We propose a three

  8. Network-Based Isoform Quantification with RNA-Seq Data for Cancer Transcriptome Analysis.

    Directory of Open Access Journals (Sweden)

    Wei Zhang

    2015-12-01

    Full Text Available High-throughput mRNA sequencing (RNA-Seq is widely used for transcript quantification of gene isoforms. Since RNA-Seq data alone is often not sufficient to accurately identify the read origins from the isoforms for quantification, we propose to explore protein domain-domain interactions as prior knowledge for integrative analysis with RNA-Seq data. We introduce a Network-based method for RNA-Seq-based Transcript Quantification (Net-RSTQ to integrate protein domain-domain interaction network with short read alignments for transcript abundance estimation. Based on our observation that the abundances of the neighboring isoforms by domain-domain interactions in the network are positively correlated, Net-RSTQ models the expression of the neighboring transcripts as Dirichlet priors on the likelihood of the observed read alignments against the transcripts in one gene. The transcript abundances of all the genes are then jointly estimated with alternating optimization of multiple EM problems. In simulation Net-RSTQ effectively improved isoform transcript quantifications when isoform co-expressions correlate with their interactions. qRT-PCR results on 25 multi-isoform genes in a stem cell line, an ovarian cancer cell line, and a breast cancer cell line also showed that Net-RSTQ estimated more consistent isoform proportions with RNA-Seq data. In the experiments on the RNA-Seq data in The Cancer Genome Atlas (TCGA, the transcript abundances estimated by Net-RSTQ are more informative for patient sample classification of ovarian cancer, breast cancer and lung cancer. All experimental results collectively support that Net-RSTQ is a promising approach for isoform quantification. Net-RSTQ toolbox is available at http://compbio.cs.umn.edu/Net-RSTQ/.

  9. miRNA Regulation Network Analysis in Qianliening Capsule Treatment of Benign Prostatic Hyperplasia

    Directory of Open Access Journals (Sweden)

    Liya Liu

    2015-01-01

    Full Text Available Objective. The objective of this study was to evaluate the molecular mechanism by which Qianliening capsule (QC treats benign prostatic hyperplasia (BPH. Methods. Benign prostatic hyperplasia epithelial cell line BPH-1 was treated with 0, 1.25, 2.5, and 5 mg/mL QC for 48 h, respectively. Evaluation of cell viability and observation of morphologic changes of BPH-1 cell gene expression and miRNA expression profiles were analyzed. Real-time quantitative PCR was used to confirm changes in miRNA and gene expression. GO and KEGG pathway-based approaches were used to investigate biological functions and signaling pathways affected by differentially expressed mRNAs. Results. QC inhibited BPH-1 cell proliferation. Differential expression of 19 upregulated and 2 downregulated miRNAs was observed in QC-treated BPH-1 cells compared to untreated control cells. 107 upregulated and 71 downregulated genes were identified between the two groups. Significantly enriched signaling pathways based on deregulated mRNAs were mainly involved in regulation of cell proliferation, apoptosis, and so on. Additionally, miRNA-mRNA network analysis integrated these miRNAs and genes by outlining interactions of miRNA and related genes. Conclusion. The study was the first report of differentially expressed miRNA and mRNA in QC-treated BPH-1 cells.

  10. Simulation and measurement of optical access network with different types of optical-fiber amplifiers

    Science.gov (United States)

    Latal, Jan; Vogl, Jan; Koudelka, Petr; Vitasek, Jan; Siska, Petr; Liner, Andrej; Papes, Martin; Vasinek, Vladimir

    2012-01-01

    The optical access networks are nowadays swiftly developing in the telecommunications field. These networks can provide higher data transfer rates, and have great potential to the future in terms of transmission possibilities. Many local internet providers responded to these facts and began gradually installing optical access networks into their originally built networks, mostly based on wireless communication. This allowed enlargement of possibilities for end-users in terms of high data rates and also new services such as Triple play, IPTV (Internet Protocol television) etc. However, with this expansion and building-up is also related the potential of reach in case of these networks. Big cities, such as Prague, Brno, Ostrava or Olomouc cannot be simply covered, because of their sizes and also because of their internal regulations given by various organizations in each city. Standard logical and also physical reach of EPON (IEEE 802.3ah - Ethernet Passive Optical Network) optical access network is about 20 km. However, for networks based on Wavelength Division Multiplex the reach can be up to 80 km, if the optical-fiber amplifier is inserted into the network. This article deals with simulation of different types of amplifiers for WDM-PON (Wavelength Division Multiplexing-Passive Optical Network) network in software application Optiwave OptiSystem and than are the values from the application and from real measurement compared.

  11. Model-based design of RNA hybridization networks implemented in living cells.

    Science.gov (United States)

    Rodrigo, Guillermo; Prakash, Satya; Shen, Shensi; Majer, Eszter; Daròs, José-Antonio; Jaramillo, Alfonso

    2017-09-19

    Synthetic gene circuits allow the behavior of living cells to be reprogrammed, and non-coding small RNAs (sRNAs) are increasingly being used as programmable regulators of gene expression. However, sRNAs (natural or synthetic) are generally used to regulate single target genes, while complex dynamic behaviors would require networks of sRNAs regulating each other. Here, we report a strategy for implementing such networks that exploits hybridization reactions carried out exclusively by multifaceted sRNAs that are both targets of and triggers for other sRNAs. These networks are ultimately coupled to the control of gene expression. We relied on a thermodynamic model of the different stable conformational states underlying this system at the nucleotide level. To test our model, we designed five different RNA hybridization networks with a linear architecture, and we implemented them in Escherichia coli. We validated the network architecture at the molecular level by native polyacrylamide gel electrophoresis, as well as the network function at the bacterial population and single-cell levels with a fluorescent reporter. Our results suggest that it is possible to engineer complex cellular programs based on RNA from first principles. Because these networks are mainly based on physical interactions, our designs could be expanded to other organisms as portable regulatory resources or to implement biological computations. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

  12. A global network of RNA and protein interactions in Fronto Temporal Dementia

    Directory of Open Access Journals (Sweden)

    Francesca eFontana

    2015-03-01

    Full Text Available Fronto Temporal Dementia (FTD is a neurodegenerative disorder characterized by degeneration of the fronto temporal lobes and abnormal protein inclusions. It exhibits a broad clinicopathological spectrum and has been linked to mutations in seven different genes. We will provide a picture, which connects the products of these genes, albeit diverse in nature and function, in a network. Despite the paucity of information available for some of these genes, we believe that RNA processing and post-transcriptional regulation of gene expression might constitute a common theme in the network. Recent studies have unraveled the role of mutations affecting the functions of RNA binding proteins and regulation of microRNAs. This review will combine all the recent findings on genes involved in the pathogenesis of FTD, highlighting the importance of a common network of interactions in order to study and decipher the heterogeneous clinical manifestations associated with FTD. This approach could be helpful for the research of potential therapeutic strategies.

  13. African Copyright and Access to Knowledge Network (ACA2K ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    ... copyright climate could limit access to knowledge goods and thereby hinder ... Congratulations to the first cohort of Women in Climate Change Science Fellows! ... International Water Resources Association, in close collaboration with IDRC, ...

  14. On the Impact of Closed Access and Users Identities in Spectrum-Shared Overlaid Wireless Networks

    KAUST Repository

    Radaydeh, Redha M.; Gaaloul, Fakhreddine; Alouini, Mohamed-Slim

    2016-01-01

    © 2015 IEEE. This paper develops analytical models to investigate the impact of various operation terms and parameters on the downlink performance of spectrum-shared overlaid networks under closed-access small cells deployment. It is considered

  15. Impact of Users Identities and Access Conditions on Downlink Performance in Closed Small-Cell Networks

    KAUST Repository

    Radaydeh, Redha; Gaaloul, Fakhreddine; Alouini, Mohamed-Slim

    2015-01-01

    This paper investigates the effect of various operation parameters on the downlink user performance in overlaid small-cell networks. The case study considers closed-access small cells (e.g., femtocells), wherein only active authorized user

  16. Low-Complexity Scheduling and Power Adaptation for Coordinated Cloud-Radio Access Networks

    KAUST Repository

    Douik, Ahmed; Dahrouj, Hayssam; Al-Naffouri, Tareq Y.; Alouini, Mohamed-Slim

    2017-01-01

    In practical wireless systems, the successful implementation of resource allocation techniques strongly depends on the algorithmic complexity. Consider a cloud-radio access network (CRAN), where the central cloud is responsible for scheduling

  17. Resource allocation in heterogeneous cloud radio access networks: advances and challenges

    KAUST Repository

    Dahrouj, Hayssam; Douik, Ahmed S.; Dhifallah, Oussama Najeeb; Al-Naffouri, Tareq Y.; Alouini, Mohamed-Slim

    2015-01-01

    , becomes a necessity. By connecting all the base stations from different tiers to a central processor (referred to as the cloud) through wire/wireline backhaul links, the heterogeneous cloud radio access network, H-CRAN, provides an open, simple

  18. Impacts on the Voltage Profile of DC Distribution Network with DG Access

    Science.gov (United States)

    Tu, J. J.; Yin, Z. D.

    2017-07-01

    With the development of electronic, more and more distributed generations (DGs) access into grid and cause the research fever of direct current (DC) distribution network. Considering distributed generation (DG) location and capacity have great impacts on voltage profile, so use IEEE9 and IEEE33 typical circuit as examples, with DGs access in centralized and decentralized mode, to compare voltage profile in alternating and direct current (AC/DC) distribution network. Introducing the voltage change ratio as an evaluation index, so gets the general results on voltage profile of DC distributed network with DG access. Simulation shows that, in the premise of reasonable location and capacity, DC distribution network is more suitable for DG access.

  19. HumanViCe: Host ceRNA network in virus infected cells in human

    Directory of Open Access Journals (Sweden)

    Suman eGhosal

    2014-07-01

    Full Text Available Host-virus interaction via host cellular components has been an important field of research in recent times. RNA interference mediated by short interfering RNAs and microRNAs (miRNA, is a widespread anti-viral defence strategy. Importantly, viruses also encode their own miRNAs. In recent times miRNAs were identified as key players in host-virus interaction. Furthermore, viruses were shown to exploit the host miRNA networks to suite their own need. The complex cross-talk between host and viral miRNAs and their cellular and viral targets forms the environment for viral pathogenesis. Apart from protein-coding mRNAs, non-coding RNAs may also be targeted by host or viral miRNAs in virus infected cells, and viruses can exploit the host miRNA mediated gene regulatory network via the competing endogenous RNA effect. A recent report showed that viral U-rich non-coding RNAs called HSUR, expressed in primate virus herpesvirus saimiri (HVS infected T cells, were able to bind to three host miRNAs, causing significant alteration in cellular level for one of the miRNAs. We have predicted protein coding and non protein-coding targets for viral and human miRNAs in virus infected cells. We identified viral miRNA targets within host non-coding RNA loci from AGO interacting regions in three different virus infected cells. Gene ontology (GO and pathway enrichment analysis of the genes comprising the ceRNA networks in the virus infected cells revealed enrichment of key cellular signalling pathways related to cell fate decisions and gene transcription, like Notch and Wnt signalling pathways, as well as pathways related to viral entry, replication and virulence. We identified a vast number of non-coding transcripts playing as potential ceRNAs to the immune response associated genes; e.g. APOBEC family genes, in some virus infected cells. All these information are compiled in HumanViCe, a comprehensive database that provides the potential ceRNA networks in virus

  20. Energy Saving Scheme Based On Traffic Forwarding For Optical Fiber Access Networks

    DEFF Research Database (Denmark)

    Lopez, G. Arturo Rodes; Estaran Tolosa, Jose Manuel; Vegas Olmos, Juan José

    2013-01-01

    We report on an energy saving block that regroups and powers off OLTs during low traffic periods, resulting in energy savings up to 87,5% in the central office of optical access networks.......We report on an energy saving block that regroups and powers off OLTs during low traffic periods, resulting in energy savings up to 87,5% in the central office of optical access networks....

  1. Asynchronous Free-Space Optical CDMA Communications System for Last-mile Access Network

    DEFF Research Database (Denmark)

    Jurado-Navas, Antonio; Raddo, Thiago R.; Sanches, Anderson L.

    2016-01-01

    We propose a new hybrid asynchronous OCDMA-FSO communications system for access network solutions. New ABER expressions are derived under gamma-gamma scintillation channels, where all users can surprisingly achieve error-free transmissions when FEC is employed.......We propose a new hybrid asynchronous OCDMA-FSO communications system for access network solutions. New ABER expressions are derived under gamma-gamma scintillation channels, where all users can surprisingly achieve error-free transmissions when FEC is employed....

  2. Knowledge in Access in Rural Interconnected Areas Network Phase ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Researchers will explore network management issues by -examining KariaNet's ... Institution Country. Lebanon. Institution Website. http://www.aub.edu.lb ... IDRC “unpacks women's empowerment” at McGill University Conference. Findings ...

  3. Optical Multiple Access Network (OMAN) for advanced processing satellite applications

    Science.gov (United States)

    Mendez, Antonio J.; Gagliardi, Robert M.; Park, Eugene; Ivancic, William D.; Sherman, Bradley D.

    1991-01-01

    An OMAN breadboard for exploring advanced processing satellite circuit switch applications is introduced. Network architecture, hardware trade offs, and multiple user interference issues are presented. The breadboard test set up and experimental results are discussed.

  4. BP Neural Network Could Help Improve Pre-miRNA Identification in Various Species

    Directory of Open Access Journals (Sweden)

    Limin Jiang

    2016-01-01

    Full Text Available MicroRNAs (miRNAs are a set of short (21–24 nt noncoding RNAs that play significant regulatory roles in cells. In the past few years, research on miRNA-related problems has become a hot field of bioinformatics because of miRNAs’ essential biological function. miRNA-related bioinformatics analysis is beneficial in several aspects, including the functions of miRNAs and other genes, the regulatory network between miRNAs and their target mRNAs, and even biological evolution. Distinguishing miRNA precursors from other hairpin-like sequences is important and is an essential procedure in detecting novel microRNAs. In this study, we employed backpropagation (BP neural network together with 98-dimensional novel features for microRNA precursor identification. Results show that the precision and recall of our method are 95.53% and 96.67%, respectively. Results further demonstrate that the total prediction accuracy of our method is nearly 13.17% greater than the state-of-the-art microRNA precursor prediction software tools.

  5. A new method for discovering disease-specific MiRNA-target regulatory networks.

    Directory of Open Access Journals (Sweden)

    Miriam Baglioni

    Full Text Available Genes and their expression regulation are among the key factors in the comprehension of the genesis and development of complex diseases. In this context, microRNAs (miRNAs are post-transcriptional regulators that play an important role in gene expression since they are frequently deregulated in pathologies like cardiovascular disease and cancer. In vitro validation of miRNA--targets regulation is often too expensive and time consuming to be carried out for every possible alternative. As a result, a tool able to provide some criteria to prioritize trials is becoming a pressing need. Moreover, before planning in vitro experiments, the scientist needs to evaluate the miRNA-target genes interaction network. In this paper we describe the miRable method whose purpose is to identify new potentially relevant genes and their interaction networks associate to a specific pathology. To achieve this goal miRable follows a system biology approach integrating together general-purpose medical knowledge (literature, Protein-Protein Interaction networks, prediction tools and pathology specific data (gene expression data. A case study on Prostate Cancer has shown that miRable is able to: 1 find new potential miRNA-targets pairs, 2 highlight novel genes potentially involved in a disease but never or little studied before, 3 reconstruct all possible regulatory subnetworks starting from the literature to expand the knowledge on the regulation of miRNA regulatory mechanisms.

  6. Upgrade of hybrid fibre coax networks towards bi-directional access

    NARCIS (Netherlands)

    Khoe, G.D.; Wolters, R.P.C.; Boom, van den H.P.A.; Prati, G.

    1997-01-01

    In this paper we describe an upgrade scenario for Hybrid Fibre Coax (HFC) CATV Networks towards hi-directional access. The communication system described has been newly designed, and is based on the use of Direct Sequence- Code Division Multiple-Access (DS-CDMA). Due to its spread-spectrum

  7. Community access networks: how to connect the next billion to the ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Community access networks: how to connect the next billion to the Internet. Despite recent progress with mobile technology diffusion, more than four billion people worldwide are unconnected and have limited access to global communication infrastructure. The cost of implementing connectivity infrastructure in underserved ...

  8. Converged wireline and wireless signal distribution in optical fiber access networks

    DEFF Research Database (Denmark)

    Prince, Kamau

    This thesis presents results obtained during the course of my doctoral studies into the transport of fixed and wireless signaling over a converged otpical access infrastructure. In the formulation, development and assessment of a converged paradigma for multiple-services delivery via optical access...... networking infrastructure, I have demonstrated increased functionalities with existing optical technologies and commercially available optoelectronic devices. I have developed novel systems for extending the range of optical access systems, and have demonstrated the repurposing of standard digital devices...

  9. Social Networks and Health: Understanding the Nuances of Healthcare Access between Urban and Rural Populations.

    Science.gov (United States)

    Amoah, Padmore Adusei; Edusei, Joseph; Amuzu, David

    2018-05-13

    Communities and individuals in many sub-Saharan African countries often face limited access to healthcare. Hence, many rely on social networks to enhance their chances for adequate health care. While this knowledge is well-established, little is known about the nuances of how different population groups activate these networks to improve access to healthcare. This paper examines how rural and urban dwellers in the Ashanti Region in Ghana distinctively and systematically activate their social networks to enhance access to healthcare. It uses a qualitative cross-sectional design, with in-depth interviews of 79 primary participants (28 urban and 51 rural residents) in addition to the views of eight community leaders and eight health personnel. It was discovered that both intimate and distanced social networks for healthcare are activated at different periods by rural and urban residents. Four main stages of social networks activation, comprising different individuals and groups were observed among rural and urban dwellers. Among both groups, physical proximity, privacy, trust and sense of fairness, socio-cultural meaning attached to health problems, and perceived knowledge and other resources (mainly money) held in specific networks inherently influenced social network activation. The paper posits that a critical analysis of social networks may help to tailor policy contents to individuals and groups with limited access to healthcare.

  10. DiffServ resource management in IP-based radio access networks

    NARCIS (Netherlands)

    Heijenk, Geert; Karagiannis, Georgios; Rexhepi, Vlora; Westberg, Lars; prof.dr. Prasad, R.; prof.dr. Bach Andersen, J.

    2001-01-01

    The increasing popularity of the Internet, the flexibility of IP, and the wide deployment of IP technologies, as well as the growth of mobile communications have driven the development of IP-based solutions for wireless networking. The introduction of IP-based transport in Radio Access Networks

  11. mCRAN: A radio access network architecture for 5G indoor ccommunications

    NARCIS (Netherlands)

    Chandra, Kishor; Cao, Zizheng; Bruintjes, Tom; Prasad, R.V.; Karagiannis, Georgios; Tangdiongga, E.; van den Boom, H.P.A.; Kokkeler, Andre B.J.

    2015-01-01

    Millimeter wave (mmWave) communication is being seen as a disruptive technology for 5G era. In particular, 60GHz frequency band has emerged as a promising candidate for multi-Gbps connectivity in indoor and hotspot areas. In terms of network architecture, cloud radio access network (CRAN) has

  12. mCRAN : a radio access network architecture for 5G indoor communications

    NARCIS (Netherlands)

    Chandra, Kishor; Cao, Zizheng; Bruintjes, T. M.; Prasad, R. Venkatesha; Karagiannis, G.; Tangdiongga, Eduward; van den Boom, H.P.A.; Kokkeler, A. B J

    2015-01-01

    Millimeter wave (mmWave) communication is being seen as a disruptive technology for 5G era. In particular, 60GHz frequency band has emerged as a promising candidate for multi-Gbps connectivity in indoor and hotspot areas. In terms of network architecture, cloud radio access network (CRAN) has

  13. The ENSDF radioactivity data base for IBM-PC and computer network access

    International Nuclear Information System (INIS)

    Ekstroem, P.; Spanier, L.

    1989-08-01

    A data base system for radioactivity gamma rays is described. A base with approximately 15000 gamma rays from 2777 decays is available for installation on the hard disk of a PC, and a complete system with approximately 73000 gamma rays is available for on-line access via the NORDic University computer NETwork (NORDUNET) and the Swedish University computer NETwork (SUNET)

  14. EAP-Kerberos: A Low Latency EAP Authentication Method for Faster Handoffs in Wireless Access Networks

    Science.gov (United States)

    Zrelli, Saber; Okabe, Nobuo; Shinoda, Yoichi

    The wireless medium is a key technology for enabling ubiquitous and continuous network connectivity. It is becoming more and more important in our daily life especially with the increasing adoption of networking technologies in many fields such as medical care and transportation systems. Although most wireless technologies nowadays provide satisfying bandwidth and higher speeds, several of these technologies still lack improvements with regard to handoff performance. In this paper, we focus on wireless network technologies that rely on the Extensible Authentication Protocol for mutual authentication between the station and the access network. Such technologies include local area wireless networks (IEEE 802.11) as well as broadband wireless networks (IEEE 802.16). We present a new EAP authentication method based on a three party authentication scheme, namely Kerberos, that considerably shortens handoff delays. Compared to other methods, the proposed method has the advantage of not requiring any changes on the access points, making it readily deployable at reasonable costs.

  15. microRNA as a potential vector for the propagation of robustness in protein expression and oscillatory dynamics within a ceRNA network.

    Directory of Open Access Journals (Sweden)

    Claude Gérard

    Full Text Available microRNAs (miRNAs are small noncoding RNAs that are important post-transcriptional regulators of gene expression. miRNAs can induce thresholds in protein synthesis. Such thresholds in protein output can be also achieved by oligomerization of transcription factors (TF for the control of gene expression. First, we propose a minimal model for protein expression regulated by miRNA and by oligomerization of TF. We show that miRNA and oligomerization of TF generate a buffer, which increases the robustness of protein output towards molecular noise as well as towards random variation of kinetics parameters. Next, we extend the model by considering that the same miRNA can bind to multiple messenger RNAs, which accounts for the dynamics of a minimal competing endogenous RNAs (ceRNAs network. The model shows that, through common miRNA regulation, TF can control the expression of all proteins formed by the ceRNA network, even if it drives the expression of only one gene in the network. The model further suggests that the threshold in protein synthesis mediated by the oligomerization of TF can be propagated to the other genes, which can increase the robustness of the expression of all genes in such ceRNA network. Furthermore, we show that a miRNA could increase the time delay of a "Goodwin-like" oscillator model, which may favor the occurrence of oscillations of large amplitude. This result predicts important roles of miRNAs in the control of the molecular mechanisms leading to the emergence of biological rhythms. Moreover, a model for the latter oscillator embedded in a ceRNA network indicates that the oscillatory behavior can be propagated, via the shared miRNA, to all proteins formed by such ceRNA network. Thus, by means of computational models, we show that miRNAs could act as vectors allowing the propagation of robustness in protein synthesis as well as oscillatory behaviors within ceRNA networks.

  16. Integrative analyses reveal a long noncoding RNA-mediated sponge regulatory network in prostate cancer.

    Science.gov (United States)

    Du, Zhou; Sun, Tong; Hacisuleyman, Ezgi; Fei, Teng; Wang, Xiaodong; Brown, Myles; Rinn, John L; Lee, Mary Gwo-Shu; Chen, Yiwen; Kantoff, Philip W; Liu, X Shirley

    2016-03-15

    Mounting evidence suggests that long noncoding RNAs (lncRNAs) can function as microRNA sponges and compete for microRNA binding to protein-coding transcripts. However, the prevalence, functional significance and targets of lncRNA-mediated sponge regulation of cancer are mostly unknown. Here we identify a lncRNA-mediated sponge regulatory network that affects the expression of many protein-coding prostate cancer driver genes, by integrating analysis of sequence features and gene expression profiles of both lncRNAs and protein-coding genes in tumours. We confirm the tumour-suppressive function of two lncRNAs (TUG1 and CTB-89H12.4) and their regulation of PTEN expression in prostate cancer. Surprisingly, one of the two lncRNAs, TUG1, was previously known for its function in polycomb repressive complex 2 (PRC2)-mediated transcriptional regulation, suggesting its sub-cellular localization-dependent function. Our findings not only suggest an important role of lncRNA-mediated sponge regulation in cancer, but also underscore the critical influence of cytoplasmic localization on the efficacy of a sponge lncRNA.

  17. Homeless Families' Education Networks: An Examination of Access and Mobilization

    Science.gov (United States)

    Miller, Peter M.

    2011-01-01

    Purpose: This study sought deeper understanding of how sheltered families accessed and mobilized educationally related relationships and resources during periods of homelessness. Such work is posited to be especially relevant considering that there is a growing crisis of family homelessness in the United States and school- and community-based…

  18. Ubiquitous access control and policy management in personal networks

    DEFF Research Database (Denmark)

    Kyriazanos, Dimitris M.; Stassinopoulos, George I.; Prasad, Neeli R.

    2006-01-01

    distributed master devices acting as access points- and also pure peer-to-peer interactions inside the PN. Taking benefit from the modularity and scalability of the design, this solution can be extended into supporting coalitions of different security domains, deriving from the creation of PNs federations....

  19. Public Access; Public Interest. The Network Project. Notebook Number 11.

    Science.gov (United States)

    Columbia Univ., New York, NY. Network Project.

    The transcript of a panel discussion and an essay on public access to and control of society's information resources are presented. It is contended that the electronic Media--including radio, television, and communication satellites--are controlled by a select group of individuals and corporations and that they are not meeting the public interest.…

  20. Multiple access protocol for supporting multimedia services in wireless ATM networks

    DEFF Research Database (Denmark)

    Liu, Hong; Dittmann, Lars; Gliese, Ulrik Bo

    1999-01-01

    The furture broadband wireless asynchronous transfer mode (ATM) networks must provide seamless extension of multimedia services from the wireline ATM networks. This requires an effecient wireless access protocol to fulfill varying Quality-og-Service (QoS) requirements for multimedia applications....... In this paper, we propose a multiple access protocol using centralized and distributed channel access control techniques to provide QoS guarantees for multimedia services by taking advantage of the characteristics of different kinds of ATM traffics. Multimedia traffic, including constant bit rate (CBR...

  1. Virus spreading in wireless sensor networks with a medium access control mechanism

    International Nuclear Information System (INIS)

    Wang Ya-Qi; Yang Xiao-Yuan

    2013-01-01

    In this paper, an extended version of standard susceptible-infected (SI) model is proposed to consider the influence of a medium access control mechanism on virus spreading in wireless sensor networks. Theoretical analysis shows that the medium access control mechanism obviously reduces the density of infected nodes in the networks, which has been ignored in previous studies. It is also found that by increasing the network node density or node communication radius greatly increases the number of infected nodes. The theoretical results are confirmed by numerical simulations. (general)

  2. Power Allocation and Outage Probability Analysis for SDN-based Radio Access Networks

    Science.gov (United States)

    Zhao, Yongxu; Chen, Yueyun; Mai, Zhiyuan

    2018-01-01

    In this paper, performance of Access network Architecture based SDN (Software Defined Network) is analyzed with respect to the power allocation issue. A power allocation scheme PSO-PA (Particle Swarm Optimization-power allocation) algorithm is proposed, the proposed scheme is subjected to constant total power with the objective of minimizing system outage probability. The entire access network resource configuration is controlled by the SDN controller, then it sends the optimized power distribution factor to the base station source node (SN) and the relay node (RN). Simulation results show that the proposed scheme reduces the system outage probability at a low complexity.

  3. Market opening and third party access in district heating networks

    International Nuclear Information System (INIS)

    Soederholm, Patrik; Warell, Linda

    2011-01-01

    The purpose of this paper is to analyse the possible effects of introducing TPA in district heating networks by identifying and scrutinizing a number of possible scenarios for increased competition. The analysis builds on a theoretical discussion of economic efficiency in district heating operations, and the possible impacts on consumer prices of a market opening. An important conclusion is that regulated TPA may have small positive effects on competition, and at the same time it can have a negative impact on the possibility to run the integrated district heating operations in a cost-effective manner. This conclusion stems in part from the observation that most district heating networks are local in scope. Moreover, district heating operations are highly interdependent in, for instance, that the level of the return temperature of the water will affect the efficiency of combined heat and power plants. For these reasons, the introduction of the so-called single-buyer model or, perhaps even more preferable, an extended and more transparent producer market could represent more efficient market designs. Moreover, in networks with clear natural monopoly characteristics an ex ante price regulation must be considered. - Research Highlights: →The paper analyses the possible effects of TPA in district heating networks. → Four possible scenarios for increased competition are identified and scrutinized. → A conclusion is that regulated TPA have only small positive effects on competition. → District heating operations are highly interdependent and separation can be costly.

  4. Adaptive Information Access on Multiple Applications Support Wireless Sensor Networks

    DEFF Research Database (Denmark)

    Tobgay, Sonam; Olsen, Rasmus Løvenstein; Prasad, Ramjee

    2014-01-01

    information is challenged by dynamic nature of information elements. These challenges are more prominent in case of wireless sensor network (WSN) applications, as the information that the sensor node collects are mostly dynamic in nature (say, temperature). Therefore, it is likely that there can be a mismatch...

  5. Adaptive Information Access in Multiple Applications Support Wireless Sensor Network

    DEFF Research Database (Denmark)

    Tobgay, Sonam; Olsen, Rasmus Løvenstein; Prasad, Ramjee

    2012-01-01

    Nowadays, due to wide applicability of Wireless Sensor Network (WSN) added by the low cost sensor devices, its popularity among the researchers and industrialists are very much visible. A substantial amount of works can be seen in the literature on WSN which are mainly focused on application...

  6. Requirements and Algorithms for Cooperation of Heterogeneous Radio Access Networks

    DEFF Research Database (Denmark)

    Mihovska, Albena D.; Tragos, Elias; Mino, Emilio

    2009-01-01

    systems.The RRM mechanisms are evaluated for the scenario of intra-RAN and inter-RAN user mobility. The RRM framework incorporates as novelty improved triggering mechanisms, a network-controlledmobility management scheme with policy enforcement on different levels in the RANarchitecture, and a distributed...

  7. Ethernet access network based on free-space optic deployment technology

    Science.gov (United States)

    Gebhart, Michael; Leitgeb, Erich; Birnbacher, Ulla; Schrotter, Peter

    2004-06-01

    The satisfaction of all communication needs from single households and business companies over a single access infrastructure is probably the most challenging topic in communications technology today. But even though the so-called "Last Mile Access Bottleneck" is well known since more than ten years and many distribution technologies have been tried out, the optimal solution has not yet been found and paying commercial access networks offering all service classes are still rare today. Conventional services like telephone, radio and TV, as well as new and emerging services like email, web browsing, online-gaming, video conferences, business data transfer or external data storage can all be transmitted over the well known and cost effective Ethernet networking protocol standard. Key requirements for the deployment technology driven by the different services are high data rates to the single customer, security, moderate deployment costs and good scalability to number and density of users, quick and flexible deployment without legal impediments and high availability, referring to the properties of optical and wireless communication. We demonstrate all elements of an Ethernet Access Network based on Free Space Optic distribution technology. Main physical parts are Central Office, Distribution Network and Customer Equipment. Transmission of different services, as well as configuration, service upgrades and remote control of the network are handled by networking features over one FSO connection. All parts of the network are proven, the latest commercially available technology. The set up is flexible and can be adapted to any more specific need if required.

  8. The ARAC client system: network-based access to ARAC

    International Nuclear Information System (INIS)

    Leach, M J; Sumikawa, D; Webster, C

    1999-01-01

    The ARAC Client System allows users (such as emergency managers and first responders) with commonly available desktop and laptop computers to utilize the central ARAC system over the Internet or any other communications link using Internet protocols. Providing cost-effective fast access to the central ARAC system greatly expands the availability of the ARAC capability. The ARAC Client system consists of (1) local client applications running on the remote user's computer, and (2) ''site servers'' that provide secure access to selected central ARAC system capabilities and run on a scalable number of dedicated workstations residing at the central facility. The remote client applications allow users to describe a real or potential them-bio event, electronically sends this information to the central ARAC system which performs model calculations, and quickly receive and visualize the resulting graphical products. The site servers will support simultaneous access to ARAC capabilities by multiple users. The ARAC Client system is based on object-oriented client/server and distributed computing technologies using CORBA and Java, and consists of a large number of interacting components

  9. Admission Control and Interference Management in Dynamic Spectrum Access Networks

    Directory of Open Access Journals (Sweden)

    Jorge Martinez-Bauset

    2010-01-01

    Full Text Available We study two important aspects to make dynamic spectrum access work in practice: the admission policy of secondary users (SUs to achieve a certain degree of quality of service and the management of the interference caused by SUs to primary users (PUs. In order to limit the forced termination probability of SUs, we evaluate the Fractional Guard Channel reservation scheme to give priority to spectrum handovers over new arrivals. We show that, contrary to what has been proposed, the throughput of SUs cannot be maximized by configuring the reservation parameter. We also study the interference caused by SUs to PUs. We propose and evaluate different mechanisms to reduce the interference, which are based on simple spectrum access algorithms for both PUs and SUs and channel repacking algorithms for SUs. Numerical results show that the reduction can be of one order of magnitude or more with respect to the random access case. Finally, we propose an adaptive admission control scheme that is able to limit simultaneously the forced termination probability of SUs and what we define as the probability of interference. Our scheme does not require any configuration parameters beyond the probability objectives. Besides, it is simple to implement and it can operate with any arrival process and distribution of the session duration.

  10. CHOICE OF OPTION FOR IMPLEMENTATION OF THE MULTILEVEL SECURE ACCESS TO THE EXTERNAL NETWORK

    Directory of Open Access Journals (Sweden)

    V. S. Kolomoitcev

    2016-01-01

    Full Text Available We study the optimal way for design of access scheme called "Direct Connection. This scheme provides a secure access to external network resources, and consists of several groups of routers and two kinds of firewalls. The scheme is considered in view of the fact that the system has got common areas of removing threats in the channel for different means of protection. Parameters of average residence time of request in the system and its reliability were obtained for each variant of access scheme. Based on the results, comparison of the ways of design for access scheme was carried out between themselves and with the standard access scheme (with onefirewall. It was found out that design of access scheme with a single group of routers for the whole system has better performance and reliability than the other variants of "Direct Connection" access scheme.

  11. Building a multimodal network and determining individual accessibility by public transportation

    DEFF Research Database (Denmark)

    Djurhuus, Sune; Hansen, Henning Sten; Aadahl, Mette

    2016-01-01

    The increased availability of transit schedules from web sites or travel planners as well as more disaggregate data has led to a growing interest in creating individual public transportation accessibility measures. However, used extensively, standard GIS software does not have direct capabilities...... from a travel planner into a multimodal network model using simple SQL (structured query language) programming and standard GIS. The method presented here integrates all parts of travelling by public transportation from individual home addresses to all reachable transit stops within different travel....... The accessibility areas are created at morning rush hour for a study population of 29 447 individuals and a few examples of accessibility areas are presented. The results show a big difference in individual public transportation accessibility in the region. In addition, how the transit network is accessed, whether...

  12. The origins and evolutionary history of human non-coding RNA regulatory networks.

    Science.gov (United States)

    Sherafatian, Masih; Mowla, Seyed Javad

    2017-04-01

    The evolutionary history and origin of the regulatory function of animal non-coding RNAs are not well understood. Lack of conservation of long non-coding RNAs and small sizes of microRNAs has been major obstacles in their phylogenetic analysis. In this study, we tried to shed more light on the evolution of ncRNA regulatory networks by changing our phylogenetic strategy to focus on the evolutionary pattern of their protein coding targets. We used available target databases of miRNAs and lncRNAs to find their protein coding targets in human. We were able to recognize evolutionary hallmarks of ncRNA targets by phylostratigraphic analysis. We found the conventional 3'-UTR and lesser known 5'-UTR targets of miRNAs to be enriched at three consecutive phylostrata. Firstly, in eukaryata phylostratum corresponding to the emergence of miRNAs, our study revealed that miRNA targets function primarily in cell cycle processes. Moreover, the same overrepresentation of the targets observed in the next two consecutive phylostrata, opisthokonta and eumetazoa, corresponded to the expansion periods of miRNAs in animals evolution. Coding sequence targets of miRNAs showed a delayed rise at opisthokonta phylostratum, compared to the 3' and 5' UTR targets of miRNAs. LncRNA regulatory network was the latest to evolve at eumetazoa.

  13. Scheduling of network access for feedback-based embedded systems

    Science.gov (United States)

    Liberatore, Vincenzo

    2002-07-01

    nd communication capabilities. Examples range from smart dust embedded in building materials to networks of appliances in the home. Embedded devices will be deployed in unprecedented numbers, will enable pervasive distributed computing, and will radically change the way people interact with the surrounding environment [EGH00a]. The paper targets embedded systems and their real-time (RT) communication requirements. RT requirements arise from the

  14. A Comparative Study of Multiplexing Schemes for Next Generation Optical Access Networks

    Science.gov (United States)

    Imtiaz, Waqas A.; Khan, Yousaf; Shah, Pir Mehar Ali; Zeeshan, M.

    2014-09-01

    Passive optical network (PON) is a high bandwidth, economical solution which can provide the necessary bandwidth to end-users. Wavelength division multiplexed passive optical networks (WDM PONs) and time division multiplexed passive optical networks (TDM PONs) are considered as an evolutionary step for next-generation optical access (NGOA) networks. However they fail to provide highest transmission capacity, efficient bandwidth access, and robust dispersion tolerance. Thus future PONs are considered on simpler, efficient and potentially scalable, optical code division multiplexed (OCDM) PONs. This paper compares the performance of existing PONs with OCDM PON to determine a suitable scheme for NGOA networks. Two system parameter are used in this paper: fiber length, and bit rate. Performance analysis using Optisystem shows that; for a sufficient system performance parameters i.e. bit error rate (BER) ≤ 10-9, and maximum quality factor (Q) ≥ 6, OCDMA PON efficiently performs upto 50 km with 10 Gbit/s per ONU.

  15. Learning Automata Based Caching for Efficient Data Access in Delay Tolerant Networks

    Directory of Open Access Journals (Sweden)

    Zhenjie Ma

    2018-01-01

    Full Text Available Effective data access is one of the major challenges in Delay Tolerant Networks (DTNs that are characterized by intermittent network connectivity and unpredictable node mobility. Currently, different data caching schemes have been proposed to improve the performance of data access in DTNs. However, most existing data caching schemes perform poorly due to the lack of global network state information and the changing network topology in DTNs. In this paper, we propose a novel data caching scheme based on cooperative caching in DTNs, aiming at improving the successful rate of data access and reducing the data access delay. In the proposed scheme, learning automata are utilized to select a set of caching nodes as Caching Node Set (CNS in DTNs. Unlike the existing caching schemes failing to address the challenging characteristics of DTNs, our scheme is designed to automatically self-adjust to the changing network topology through the well-designed voting and updating processes. The proposed scheme improves the overall performance of data access in DTNs compared with the former caching schemes. The simulations verify the feasibility of our scheme and the improvements in performance.

  16. Accessibility in networks: A useful measure for understanding social insect nest architecture

    International Nuclear Information System (INIS)

    Viana, Matheus P.; Fourcassié, Vincent; Perna, Andrea; Costa, Luciano da F.; Jost, Christian

    2013-01-01

    Networks and the associated tools from graph theory have now become well-established approaches to study natural as well as human-made systems. While early studies focused on topology and connectivity, the recent literature has acknowledged the importance of the dynamical properties of these networks. Here we focus on such a dynamic measure: accessibility. It characterizes for any given movement dynamics (such as random walks) the average number of nodes that can be reached in exactly h steps (out-accessibility), or the average number of nodes from which a given node can be reached (in-accessibility). This focus on dynamics makes accessibility particularly appropriate to study movement on networks and to detect complementary properties with respect to topology-based measurements such as betweenness centrality. We apply this measure to six nests of Cubitermes termites. Their mushroom-like 3D architectures consist of chambers and connecting tunnels that can be associated to nodes and edges in a communication network. Accessibilities turn out to be particularly low in the bottom part of the nests that link them to their underground tunneling network. We interpret this result in the context of anti-predator (ants) behavior and/or as a side effect of the global nest shape.

  17. Deployment of a Testbed in a Brazilian Research Network using IPv6 and Optical Access Technologies

    Science.gov (United States)

    Martins, Luciano; Ferramola Pozzuto, João; Olimpio Tognolli, João; Chaves, Niudomar Siqueira De A.; Reggiani, Atilio Eduardo; Hortêncio, Claudio Antonio

    2012-04-01

    This article presents the implementation of a testbed and the experimental results obtained with it on the Brazilian Experimental Network of the government-sponsored "GIGA Project." The use of IPv6 integrated to current and emerging optical architectures and technologies, such as dense wavelength division multiplexing and 10-gigabit Ethernet on the core and gigabit capable passive optical network and optical distribution network on access, were tested. These protocols, architectures, and optical technologies are promising and part of a brand new worldwide technological scenario that has being fairly adopted in the networks of enterprises and providers of the world.

  18. Scheduling Data Access in Smart Grid Networks Utilizing Context Information

    DEFF Research Database (Denmark)

    Findrik, Mislav; Grønbæk, Jesper; Olsen, Rasmus Løvenstein

    2014-01-01

    Current electrical grid is facing increased penetration of intermittent energy resources, in particular wind and solar energy. Fast variability of the power supply due to renewable energy resources can be balanced out using different energy storage systems or shifting the loads. Efficiently...... managing this fast flexibility requires two-way data exchange between a controller and sensors/meters via communication networks. In this paper we investigated scheduling of data collection utilizing meta-data from sensors that are describing dynamics of information. We show the applicability...

  19. Network access charges, vertical integration, and property rights structure - experiences from the German electricity markets

    International Nuclear Information System (INIS)

    Growitsch, C.; Wein, T.

    2005-01-01

    After the deregulation of the German electricity markets in 1998, the German government opted for a regulatory regime called negotiated third party access, which would be subject to ex-post control by the federal cartel office. Network access charges for new competitors are based on contractual arrangements between energy producers and industrial consumers. As the electricity networks are incontestable natural monopolies, the local and regional network operators are able to set (monopolistic) charges at their own discretion, restricted only by the possible interference of the federal cartel office (Bundeskartellamt). In this paper we analyze if there is evidence for varying charging behaviour depending on the supplier's economic independence (structure of property rights) or its level of vertical integration. For this purpose, we hypothesise that incorporated and vertically integrated suppliers set different charges than independent utility companies. Multivariate estimations show a relation between network access charges and the network operator's economic independence as well as level of vertical integration: on the low voltage level for an estimated annual consumption of 1700 kW/h, vertically integrated firms set-in accordance with our hypothesis-significantly lower access charges than vertically separated suppliers, whereas incorporated network operators charge significantly higher charges compared to independent suppliers. These results could not have been confirmed for other consumptions or voltage levels. (author)

  20. Unbundling in Current Broadband and Next-Generation Ultra-Broadband Access Networks

    Science.gov (United States)

    Gaudino, Roberto; Giuliano, Romeo; Mazzenga, Franco; Valcarenghi, Luca; Vatalaro, Francesco

    2014-05-01

    This article overviews the methods that are currently under investigation for implementing multi-operator open-access/shared-access techniques in next-generation access ultra-broadband architectures, starting from the traditional "unbundling-of-the-local-loop" techniques implemented in legacy twisted-pair digital subscriber line access networks. A straightforward replication of these copper-based unbundling-of-the-local-loop techniques is usually not feasible on next-generation access networks, including fiber-to-the-home point-to-multipoint passive optical networks. To investigate this issue, the article first gives a concise description of traditional copper-based unbundling-of-the-local-loop solutions, then focalizes on both next-generation access hybrid fiber-copper digital subscriber line fiber-to-the-cabinet scenarios and on fiber to the home by accounting for the mix of regulatory and technological reasons driving the next-generation access migration path, focusing mostly on the European situation.

  1. Uncovering transcription factor and microRNA risk regulatory pathways associated with osteoarthritis by network analysis.

    Science.gov (United States)

    Song, Zhenhua; Zhang, Chi; He, Lingxiao; Sui, Yanfang; Lin, Xiafei; Pan, Jingjing

    2018-05-01

    Osteoarthritis (OA) is the most common form of joint disease. The development of inflammation have been considered to play a key role during the progression of OA. Regulatory pathways are known to play crucial roles in many pathogenic processes. Thus, deciphering these risk regulatory pathways is critical for elucidating the mechanisms underlying OA. We constructed an OA-specific regulatory network by integrating comprehensive curated transcription and post-transcriptional resource involving transcription factor (TF) and microRNA (miRNA). To deepen our understanding of underlying molecular mechanisms of OA, we developed an integrated systems approach to identify OA-specific risk regulatory pathways. In this study, we identified 89 significantly differentially expressed genes between normal and inflamed areas of OA patients. We found the OA-specific regulatory network was a standard scale-free network with small-world properties. It significant enriched many immune response-related functions including leukocyte differentiation, myeloid differentiation and T cell activation. Finally, 141 risk regulatory pathways were identified based on OA-specific regulatory network, which contains some known regulator of OA. The risk regulatory pathways may provide clues for the etiology of OA and be a potential resource for the discovery of novel OA-associated disease genes. Copyright © 2018 Elsevier Inc. All rights reserved.

  2. Functional integration of complex miRNA networks in central and peripheral lesion and axonal regeneration.

    Science.gov (United States)

    Ghibaudi, M; Boido, M; Vercelli, A

    2017-11-01

    New players are emerging in the game of peripheral and central nervous system injury since their physiopathological mechanisms remain partially elusive. These mechanisms are characterized by several molecules whose activation and/or modification following a trauma is often controlled at transcriptional level. In this scenario, microRNAs (miRNAs/miRs) have been identified as main actors in coordinating important molecular pathways in nerve or spinal cord injury (SCI). miRNAs are small non-coding RNAs whose functionality at network level is now emerging as a new level of complexity. Indeed they can act as an organized network to provide a precise control of several biological processes. Here we describe the functional synergy of some miRNAs in case of SCI and peripheral damage. In particular we show how several small RNAs can cooperate in influencing simultaneously the molecular pathways orchestrating axon regeneration, inflammation, apoptosis and remyelination. We report about the networks for which miRNA-target bindings have been experimentally demonstrated or inferred based on target prediction data: in both cases, the connection between one miRNA and its downstream pathway is derived from a validated observation or is predicted from the literature. Hence, we discuss the importance of miRNAs in some pathological processes focusing on their functional structure as participating in a cooperative and/or convergence network. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. A Systems’ Biology Approach to Study MicroRNA-Mediated Gene Regulatory Networks

    Directory of Open Access Journals (Sweden)

    Xin Lai

    2013-01-01

    Full Text Available MicroRNAs (miRNAs are potent effectors in gene regulatory networks where aberrant miRNA expression can contribute to human diseases such as cancer. For a better understanding of the regulatory role of miRNAs in coordinating gene expression, we here present a systems biology approach combining data-driven modeling and model-driven experiments. Such an approach is characterized by an iterative process, including biological data acquisition and integration, network construction, mathematical modeling and experimental validation. To demonstrate the application of this approach, we adopt it to investigate mechanisms of collective repression on p21 by multiple miRNAs. We first construct a p21 regulatory network based on data from the literature and further expand it using algorithms that predict molecular interactions. Based on the network structure, a detailed mechanistic model is established and its parameter values are determined using data. Finally, the calibrated model is used to study the effect of different miRNA expression profiles and cooperative target regulation on p21 expression levels in different biological contexts.

  4. Random access to mobile networks with advanced error correction

    Science.gov (United States)

    Dippold, Michael

    1990-01-01

    A random access scheme for unreliable data channels is investigated in conjunction with an adaptive Hybrid-II Automatic Repeat Request (ARQ) scheme using Rate Compatible Punctured Codes (RCPC) Forward Error Correction (FEC). A simple scheme with fixed frame length and equal slot sizes is chosen and reservation is implicit by the first packet transmitted randomly in a free slot, similar to Reservation Aloha. This allows the further transmission of redundancy if the last decoding attempt failed. Results show that a high channel utilization and superior throughput can be achieved with this scheme that shows a quite low implementation complexity. For the example of an interleaved Rayleigh channel and soft decision utilization and mean delay are calculated. A utilization of 40 percent may be achieved for a frame with the number of slots being equal to half the station number under high traffic load. The effects of feedback channel errors and some countermeasures are discussed.

  5. Passive Optical Access Networks: State of the Art and Future Evolution

    Directory of Open Access Journals (Sweden)

    Tommaso Muciaccia

    2014-10-01

    Full Text Available In the very last years, optical access networks are growing very rapidly, from both the network operators and the research interests points of view. Fiber To The Home (FTTH is already a reality in plenty of real contexts and there has been a further stimulus to the proposal of new solutions and the investigation of new possibilities, in order to optimize network performance and reduce capital and operational expenditure. A complete and systematic overview of passive optical access networks is presented in this paper, concerning both the hot research topics and the main operative issues about the design guidelines and the deployment of Passive Optical Networks (PON architectures, nowadays the most commonly implemented approach to realize optical fiber links in the access networks. A comparison of advantages and disadvantages of different multiplexing techniques is discussed, with specific reference to WDM-based networks, almost universally considered as the enabling technology for future proof bandwidth requirements. An exhaustive summary is also given about the-state-of-the-art of modulation and encoding techniques recently proposed by the scientific community, as well as the open challenges (such as colorless and coolerless ONUs for telecom companies and international standardization compliance.

  6. 3. Informationsveranstaltung des Open Access Network Austria (OANA (Wien, 1. Juni 2016

    Directory of Open Access Journals (Sweden)

    Katharina Rieck

    2016-09-01

    Full Text Available Dieser Beitrag fasst die Ergebnisse der 3. OANA-Veranstaltung, die am 01.06.2016 im Palais Harrach in Wien stattfand, zusammen. Das „Open Access Network Austria“ (OANA ist eine „joint activity“ unter dem organisatorischen Dach des Fonds zur Förderung der wissenschaftlichen Forschung (FWF und der Österreichischen Universitätenkonferenz (UNIKO mit dem Ziel Open Access Aktivitäten in der österreichischen Forschungslandschaft zu koordinieren. Die fünf Arbeitsgruppen, die im Jänner 2015 gebildet wurden, präsentierten bei der Informationsveranstaltung die Ergebnisse und Fortschritte aus eineinhalb Jahren Arbeit. Ab Herbst 2016 werden sich vier neue Arbeitsgruppen mit den Themenschwerpunkten „Strategische Positionierung & Administration der Open-Access-Transition“, „Open Access & die Zukunft von Scholarly Communication“, „Open Access & Open Research Data“ und „Open Access & Open Educational Resources“ beschäftigen.

  7. A novel root-index based prioritized random access scheme for 5G cellular networks

    Directory of Open Access Journals (Sweden)

    Taehoon Kim

    2015-12-01

    Full Text Available Cellular networks will play an important role in realizing the newly emerging Internet-of-Everything (IoE. One of the challenging issues is to support the quality of service (QoS during the access phase, while accommodating a massive number of machine nodes. In this paper, we show a new paradigm of multiple access priorities in random access (RA procedure and propose a novel root-index based prioritized random access (RIPRA scheme that implicitly embeds the access priority in the root index of the RA preambles. The performance evaluation shows that the proposed RIPRA scheme can successfully support differentiated performance for different access priority levels, even though there exist a massive number of machine nodes.

  8. Capability-based Access Control Delegation Model on the Federated IoT Network

    DEFF Research Database (Denmark)

    Anggorojati, Bayu; Mahalle, Parikshit N.; Prasad, Neeli R.

    2012-01-01

    Flexibility is an important property for general access control system and especially in the Internet of Things (IoT), which can be achieved by access or authority delegation. Delegation mechanisms in access control that have been studied until now have been intended mainly for a system that has...... no resource constraint, such as a web-based system, which is not very suitable for a highly pervasive system such as IoT. To this end, this paper presents an access delegation method with security considerations based on Capability-based Context Aware Access Control (CCAAC) model intended for federated...... machine-to-machine communication or IoT networks. The main idea of our proposed model is that the access delegation is realized by means of a capability propagation mechanism, and incorporating the context information as well as secure capability propagation under federated IoT environments. By using...

  9. High-Capacity Hybrid Optical Fiber-Wireless Communications Links in Access Networks

    DEFF Research Database (Denmark)

    Pang, Xiaodan

    of broadband services access. To realize the seamless convergence between the two network segments, the lower capacity of wireless systems need to be increased to match the continuously increasing bandwidth of fiber-optic systems. The research works included in this thesis are devoted to experimental...... investigations of photonic-wireless links with record high capacities to fulfill the requirements of next generation hybrid optical fiber-wireless access networks. The main contributions of this thesis have expanded the state-of-the-art in two main areas: high speed millimeter-wave (mm-wave) communication links......Integration between fiber-optic and wireless communications systems in the "last mile" access networks is currently considered as a promising solution for both service providers and users, in terms of minimizing deployment cost, shortening upgrading period and increasing mobility and flexibility...

  10. Cognitive radio networks medium access control for coexistence of wireless systems

    CERN Document Server

    Bian, Kaigui; Gao, Bo

    2014-01-01

    This book gives a comprehensive overview of the medium access control (MAC) principles in cognitive radio networks, with a specific focus on how such MAC principles enable different wireless systems to coexist in the same spectrum band and carry out spectrum sharing.  From algorithm design to the latest developments in the standards and spectrum policy, readers will benefit from leading-edge knowledge of how cognitive radio systems coexist and share spectrum resources.  Coverage includes cognitive radio rendezvous, spectrum sharing, channel allocation, coexistence in TV white space, and coexistence of heterogeneous wireless systems.   • Provides a comprehensive reference on medium access control (MAC)-related problems in the design of cognitive radio systems and networks; • Includes detailed analysis of various coexistence problems related to medium access control in cognitive radio networks; • Reveals novel techniques for addressing the challenges of coexistence protocol design at a higher level ...

  11. Cross disease analysis of co-functional microRNA pairs on a reconstructed network of disease-gene-microRNA tripartite.

    Science.gov (United States)

    Peng, Hui; Lan, Chaowang; Zheng, Yi; Hutvagner, Gyorgy; Tao, Dacheng; Li, Jinyan

    2017-03-24

    MicroRNAs always function cooperatively in their regulation of gene expression. Dysfunctions of these co-functional microRNAs can play significant roles in disease development. We are interested in those multi-disease associated co-functional microRNAs that regulate their common dysfunctional target genes cooperatively in the development of multiple diseases. The research is potentially useful for human disease studies at the transcriptional level and for the study of multi-purpose microRNA therapeutics. We designed a computational method to detect multi-disease associated co-functional microRNA pairs and conducted cross disease analysis on a reconstructed disease-gene-microRNA (DGR) tripartite network. The construction of the DGR tripartite network is by the integration of newly predicted disease-microRNA associations with those relationships of diseases, microRNAs and genes maintained by existing databases. The prediction method uses a set of reliable negative samples of disease-microRNA association and a pre-computed kernel matrix instead of kernel functions. From this reconstructed DGR tripartite network, multi-disease associated co-functional microRNA pairs are detected together with their common dysfunctional target genes and ranked by a novel scoring method. We also conducted proof-of-concept case studies on cancer-related co-functional microRNA pairs as well as on non-cancer disease-related microRNA pairs. With the prioritization of the co-functional microRNAs that relate to a series of diseases, we found that the co-function phenomenon is not unusual. We also confirmed that the regulation of the microRNAs for the development of cancers is more complex and have more unique properties than those of non-cancer diseases.

  12. Resolving candidate genes of mouse skeletal muscle QTL via RNA-Seq and expression network analyses

    Directory of Open Access Journals (Sweden)

    Lionikas Arimantas

    2012-11-01

    Full Text Available Abstract Background We have recently identified a number of Quantitative Trait Loci (QTL contributing to the 2-fold muscle weight difference between the LG/J and SM/J mouse strains and refined their confidence intervals. To facilitate nomination of the candidate genes responsible for these differences we examined the transcriptome of the tibialis anterior (TA muscle of each strain by RNA-Seq. Results 13,726 genes were expressed in mouse skeletal muscle. Intersection of a set of 1061 differentially expressed transcripts with a mouse muscle Bayesian Network identified a coherent set of differentially expressed genes that we term the LG/J and SM/J Regulatory Network (LSRN. The integration of the QTL, transcriptome and the network analyses identified eight key drivers of the LSRN (Kdr, Plbd1, Mgp, Fah, Prss23, 2310014F06Rik, Grtp1, Stk10 residing within five QTL regions, which were either polymorphic or differentially expressed between the two strains and are strong candidates for quantitative trait genes (QTGs underlying muscle mass. The insight gained from network analysis including the ability to make testable predictions is illustrated by annotating the LSRN with knowledge-based signatures and showing that the SM/J state of the network corresponds to a more oxidative state. We validated this prediction by NADH tetrazolium reductase staining in the TA muscle revealing higher oxidative potential of the SM/J compared to the LG/J strain (p Conclusion Thus, integration of fine resolution QTL mapping, RNA-Seq transcriptome information and mouse muscle Bayesian Network analysis provides a novel and unbiased strategy for nomination of muscle QTGs.

  13. A Method for Upper Bounding Long Term Growth of Network Access Speed

    Directory of Open Access Journals (Sweden)

    Thomas Phillip Knudsen

    2006-06-01

    Full Text Available The development in home Internet access speed has shown an exponential development with growth rates averaging 25% per year. For resource management in network provisioning it becomes an urgent question how long such growth can continue. This paper presents a method for calculating an upper bound to visual content driven growth, proceeding from datarate requirements for a full virtual environment. Scenarios and approaches for reducing datarate requirements are considered and discussed. The presented figures for an upper bound on network access speed are discussed and perspectives on further research presented.

  14. A Method for Upper Bounding Long Term Growth of Network Access Speed

    DEFF Research Database (Denmark)

    Knudsen, Thomas Phillip; Pedersen, Jens Myrup; Madsen, Ole Brun

    2004-01-01

    The development in home Internet access speed has shown an exponential development with growth rates averaging 25% per year. For resource management in network provisioning it becomes an urgent question how long such growth can continue. This paper presents a method for calculating an upper bound...... to visual content driven growth, proceeding from datarate requirements for a full virtual environment. Scenarios and approaches for reducing datarate requirements are considered and discussed. The presented figures for an upper bound on network access speed are discussed and perspectives on further research...

  15. Modeling the video distribution link in the Next Generation Optical Access Networks

    DEFF Research Database (Denmark)

    Amaya, F.; Cárdenas, A.; Tafur Monroy, Idelfonso

    2011-01-01

    In this work we present a model for the design and optimization of the video distribution link in the next generation optical access network. We analyze the video distribution performance in a SCM-WDM link, including the noise, the distortion and the fiber optic nonlinearities. Additionally, we...... consider in the model the effect of distributed Raman amplification, used to extent the capacity and the reach of the optical link. In the model, we use the nonlinear Schrödinger equation with the purpose to obtain capacity limitations and design constrains of the next generation optical access networks....

  16. Modeling the video distribution link in the Next Generation Optical Access Networks

    International Nuclear Information System (INIS)

    Amaya, F; Cardenas, A; Tafur, I

    2011-01-01

    In this work we present a model for the design and optimization of the video distribution link in the next generation optical access network. We analyze the video distribution performance in a SCM-WDM link, including the noise, the distortion and the fiber optic nonlinearities. Additionally, we consider in the model the effect of distributed Raman amplification, used to extent the capacity and the reach of the optical link. In the model, we use the nonlinear Schroedinger equation with the purpose to obtain capacity limitations and design constrains of the next generation optical access networks.

  17. Intelligent Security Auditing Based on Access Control of Devices in Ad Hoc Network

    Institute of Scientific and Technical Information of China (English)

    XU Guang-wei; SHI You-qun; ZHU Ming; WU Guo-wen; CAO Qi-ying

    2006-01-01

    Security in Ad Hoc network is an important issue under the opening circumstance of application service. Some protocols and models of security auditing have been proposed to ensure rationality of contracting strategy and operating regulation and used to identify abnormal operation. Model of security auditing based on access control of devices will be advanced to register sign of devices and property of event of access control and to audit those actions. In the end, the model is analyzed and simulated.

  18. Acoustic Metadata Management and Transparent Access to Networked Oceanographic Data Sets

    Science.gov (United States)

    2015-09-30

    Transparent Access to Networked Oceanographic Data Sets Marie A. Roch Dept. of Computer Science San Diego State University 5500 Campanile Drive San...specific technologies for processing Excel spreadsheets and Access databases. The architecture (Figure 4) is based on a client-server model...Keesey, M. S., Lieske, J. H., Ostro, S. J., Standish, E. M., and Wimberly, R. N. (1996). "JPL’s On-Line Solar System Data Service," B. Am. Astron

  19. A Novel Dynamic Spectrum Access Framework Based on Reinforcement Learning for Cognitive Radio Sensor Networks

    Directory of Open Access Journals (Sweden)

    Yun Lin

    2016-10-01

    Full Text Available Cognitive radio sensor networks are one of the kinds of application where cognitive techniques can be adopted and have many potential applications, challenges and future research trends. According to the research surveys, dynamic spectrum access is an important and necessary technology for future cognitive sensor networks. Traditional methods of dynamic spectrum access are based on spectrum holes and they have some drawbacks, such as low accessibility and high interruptibility, which negatively affect the transmission performance of the sensor networks. To address this problem, in this paper a new initialization mechanism is proposed to establish a communication link and set up a sensor network without adopting spectrum holes to convey control information. Specifically, firstly a transmission channel model for analyzing the maximum accessible capacity for three different polices in a fading environment is discussed. Secondly, a hybrid spectrum access algorithm based on a reinforcement learning model is proposed for the power allocation problem of both the transmission channel and the control channel. Finally, extensive simulations have been conducted and simulation results show that this new algorithm provides a significant improvement in terms of the tradeoff between the control channel reliability and the efficiency of the transmission channel.

  20. Channel Access and Power Control for Mobile Crowdsourcing in Device-to-Device Underlaid Cellular Networks

    Directory of Open Access Journals (Sweden)

    Yue Ma

    2018-01-01

    Full Text Available With the access of a myriad of smart handheld devices in cellular networks, mobile crowdsourcing becomes increasingly popular, which can leverage omnipresent mobile devices to promote the complicated crowdsourcing tasks. Device-to-device (D2D communication is highly desired in mobile crowdsourcing when cellular communications are costly. The D2D cellular network is more preferable for mobile crowdsourcing than conventional cellular network. Therefore, this paper addresses the channel access and power control problem in the D2D underlaid cellular networks. We propose a novel semidistributed network-assisted power and a channel access control scheme for D2D user equipment (DUE pieces. It can control the interference from DUE pieces to the cellular user accurately and has low information feedback overhead. For the proposed scheme, the stochastic geometry tool is employed and analytic expressions are derived for the coverage probabilities of both the cellular link and D2D links. We analyze the impact of key system parameters on the proposed scheme. The Pareto optimal access threshold maximizing the total area spectral efficiency is obtained. Unlike the existing works, the performances of the cellular link and D2D links are both considered. Simulation results show that the proposed method can improve the total area spectral efficiency significantly compared to existing schemes.

  1. Research and Design of Dynamic Migration Access Control Technology Based on Heterogeneous Network

    Directory of Open Access Journals (Sweden)

    Wang Feng

    2017-01-01

    Full Text Available With the continuous development of wireless networks, the amount of privacy services in heterogeneous mobile networks is increasing, such as information storage, user access, and so on. Access control security issues for heterogeneous mobile radio network, this paper proposes a dynamic migration access control technology based on heterogeneous network. Through the system architecture of the mutual trust system, we can understand the real-time mobile node failure or abnormal state. To make the service can be terminated for the node. And adopt the 802.1X authentication way to improve the security of the system. Finally, it by combining the actual running test data, the trust update algorithm of the system is optimized to reduce the actual security threats in the environment. Experiments show that the system’s anti-attack, the success rate of access, bit error rate is in line with the expected results. This system can effectively reduce the system authentication information is illegally obtained after the network security protection mechanism failure and reduce the risk of user data leakage.

  2. Open Access to the Belgian Nuclear higher Education Network

    International Nuclear Information System (INIS)

    Simons, S.

    2005-01-01

    Under the name of the Belgian Nuclear higher Education Network, five Belgian universities, Universite Catholique de Louvain, Universiteit Gent, Universite de Liege, Vrije Universiteit Brussel have established in 2002, in collaboration with the Belgian Nuclear Research Centre SCK-CEN, a common Belgian Interuniversity Programme of the third cycle leading to the academic degree of Master of Science in Nuclear Engineering. Under the lead of the SCK-CEN a project to use and share the acquired experience of the Consortium BNEN - in order to support the realization of a common European Education Programme in Nuclear Engineering - has been accepted by the European Commission for funding under the EU's Sixth Research Framework Programme.The project wants to contribute actively to the development of a more harmonised approach for education in nuclear sciences and engineering in Europe. It brings the European higher Education Area closer to realization and helps to safeguard the necessary competence and expertise for the continued safe use of nuclear energy and other uses of radiation in industry and medicine in Europe. The project foresees input and participation from stakeholders from different countries of the enlarged European Union (EU-25) and will therefore contribute to the integration of the new member states into the European Research Area and thus to the enlargement of Europe. The set-up of the project foresees an active role for female experts with the intention to reinforce the place and role of women in science

  3. ONU power saving modes in next generation optical access networks: progress, efficiency and challenges.

    Science.gov (United States)

    Dixit, Abhishek; Lannoo, Bart; Colle, Didier; Pickavet, Mario; Demeester, Piet

    2012-12-10

    The optical network unit (ONU), installed at a customer's premises, accounts for about 60% of power in current fiber-to-the-home (FTTH) networks. We propose a power consumption model for the ONU and evaluate the ONU power consumption in various next generation optical access (NGOA) architectures. Further, we study the impact of the power savings of the ONU in various low power modes such as power shedding, doze and sleep.

  4. Nonadditivity of quantum capacities of quantum multiple-access channels and the butterfly network

    International Nuclear Information System (INIS)

    Huang Peng; He Guangqiang; Zhu Jun; Zeng Guihua

    2011-01-01

    Multipartite quantum information transmission without additional classical resources is investigated. We show purely quantum superadditivity of quantum capacity regions of quantum memoryless multiple-access (MA) channels, which are not entanglement breaking. Also, we find that the superadditivity holds when the MA channel extends to the quantum butterfly network, which can achieve quantum network coding. The present widespread effects for the channels which enable entanglement distribution have not been revealed for multipartite scenarios.

  5. Energy-Efficient Boarder Node Medium Access Control Protocol for Wireless Sensor Networks

    OpenAIRE

    Razaque, Abdul; Elleithy, Khaled M.

    2014-01-01

    This paper introduces the design, implementation, and performance analysis of the scalable and mobility-aware hybrid protocol named boarder node medium access control (BN-MAC) for wireless sensor networks (WSNs), which leverages the characteristics of scheduled and contention-based MAC protocols. Like contention-based MAC protocols, BN-MAC achieves high channel utilization, network adaptability under heavy traffic and mobility, and low latency and overhead. Like schedule-based MAC protocols,...

  6. Integrative Analysis of Sex-Specific microRNA Networks Following Stress in Mouse Nucleus Accumbens.

    Science.gov (United States)

    Pfau, Madeline L; Purushothaman, Immanuel; Feng, Jian; Golden, Sam A; Aleyasin, Hossein; Lorsch, Zachary S; Cates, Hannah M; Flanigan, Meghan E; Menard, Caroline; Heshmati, Mitra; Wang, Zichen; Ma'ayan, Avi; Shen, Li; Hodes, Georgia E; Russo, Scott J

    2016-01-01

    Adult women are twice as likely as men to suffer from affective and anxiety disorders, although the mechanisms underlying heightened female stress susceptibility are incompletely understood. Recent findings in mouse Nucleus Accumbens (NAc) suggest a role for DNA methylation-driven sex differences in genome-wide transcriptional profiles. However, the role of another epigenetic process-microRNA (miR) regulation-has yet to be explored. We exposed male and female mice to Subchronic Variable Stress (SCVS), a stress paradigm that produces depression-like behavior in female, but not male, mice, and performed next generation mRNA and miR sequencing on NAc tissue. We applied a combination of differential expression, miR-mRNA network and functional enrichment analyses to characterize the transcriptional and post-transcriptional landscape of sex differences in NAc stress response. We find that male and female mice exhibit largely non-overlapping miR and mRNA profiles following SCVS. The two sexes also show enrichment of different molecular pathways and functions. Collectively, our results suggest that males and females mount fundamentally different transcriptional and post-transcriptional responses to SCVS and engage sex-specific molecular processes following stress. These findings have implications for the pathophysiology and treatment of stress-related disorders in women.

  7. Efficient traffic grooming with dynamic ONU grouping for multiple-OLT-based access network

    Science.gov (United States)

    Zhang, Shizong; Gu, Rentao; Ji, Yuefeng; Wang, Hongxiang

    2015-12-01

    Fast bandwidth growth urges large-scale high-density access scenarios, where the multiple Passive Optical Networking (PON) system clustered deployment can be adopted as an appropriate solution to fulfill the huge bandwidth demands, especially for a future 5G mobile network. However, the lack of interaction between different optical line terminals (OLTs) results in part of the bandwidth resources waste. To increase the bandwidth efficiency, as well as reduce bandwidth pressure at the edge of a network, we propose a centralized flexible PON architecture based on Time- and Wavelength-Division Multiplexing PON (TWDM PON). It can provide flexible affiliation for optical network units (ONUs) and different OLTs to support access network traffic localization. Specifically, a dynamic ONU grouping algorithm (DGA) is provided to obtain the minimal OLT outbound traffic. Simulation results show that DGA obtains an average 25.23% traffic gain increment under different OLT numbers within a small ONU number situation, and the traffic gain will increase dramatically with the increment of the ONU number. As the DGA can be deployed easily as an application running above the centralized control plane, the proposed architecture can be helpful to improve the network efficiency for future traffic-intensive access scenarios.

  8. Future Scenarios for Software-Defined Metro and Access Networks and Software-Defined Photonics

    Directory of Open Access Journals (Sweden)

    Tommaso Muciaccia

    2017-01-01

    Full Text Available In recent years, architectures, devices, and components in telecommunication networks have been challenged by evolutionary and revolutionary factors which are drastically changing the traffic features. Most of these changes imply the need for major re-configurability and programmability not only in data-centers and core networks, but also in the metro-access segment. In a wide variety of contexts, this necessity has been addressed by the proposed introduction of the innovative paradigm of software-defined networks (SDNs. Several solutions inspired by the SDN model have been recently proposed also for metro and access networks, where the adoption of a new generation of software-defined reconfigurable integrated photonic devices is highly desirable. In this paper, we review the possible future application scenarios for software-defined metro and access networks and software-defined photonics (SDP, on the base of analytics, statistics, and surveys. This work describes the reasons underpinning the presented radical change of paradigm and summarizes the most significant solutions proposed in literature, with a specific emphasis to physical-layer reconfigurable networks and a focus on both architectures and devices.

  9. Service Class Resource Management For Green Wireless-Optical Broadband Access NetworksWOBAN

    Directory of Open Access Journals (Sweden)

    SRUTHY.S

    2015-08-01

    Full Text Available Abstract-Broadband access networks have become an essential part of worldwide communication systems because of the exponential growth of broadband services such as video on demand high definition TV internet protocol TV and video conferencing. Exponential growth in the volume of wireless data boosted by the growing popularity of mobile devices such as smartphone and tablets has forced the telecommunication industries to rethink the way networks are currently designed and to focus on the development of high-capacity mobile broadband networks. In response to this challenge researchers have been working toward the development of an integrated wireless optical broadband access network. Two major candidate technologies which are currently known for their high capacity as well as quality of service QoS for multimedia traffic are passive optical networks PON and fourth generation 4G wireless networks. PON is a wired access technology well known for its cost efficiency and high capacity whereas 4G is a wireless broadband access technology which has achieved broad market acceptance because of its ease of deployment ability to offer mobility and its cost efficiency. Integration of PON and 4G technologies in the form of wireless-optical broadband access networks offers advantages such as extension of networks in rural areas support for mobile broadband services and quick deployment of broadband networks. These two technologies however have different design architectures for handling broadband services that require quality of service. For example 4G networks use traffic classification for supporting different QoS demands whereas the PON architecture has no such mechanism to differentiate between types of traffic. These two technologies also differ in their power saving mechanisms. Propose a service class mapping for the integrated PON-4G network which is based on the MG1 queuing model and class-based power saving mechanism which significantly improves the

  10. A Fine-Grained Data Access Control System in Wireless Sensor Network

    Directory of Open Access Journals (Sweden)

    Boniface K. Alese

    2015-12-01

    Full Text Available The evolving realities of Wireless Sensor Network (WSN deployed to various terrain of life require serving multiple applications. As large amount of sensed data are distributed and stored in individual sensors nodes, the illegal access to these sensitive data can be devastating. Consequently, data insecurity becomes a big concern. This study, therefore, proposes a fine-grained access control system which only requires the right set of users to access a particular data, based on their access privileges in the sensor networks. It is designed using Priccess Protocol with Access policy formulation adopting the principle of Bell Lapadula model as well as Attribute-Based Encryption (ABE to control access to sensor data. The functionality of the proposed system is simulated using Netbeans. The performance analysis of the proposed system using execution time and size of the key show that the higher the key size, the harder it becomes for the attacker to hack the system. Additionally, the time taken for the proposed work is lesser which makes the work faster than the existing work. Consequently, a well secure interactive web-based application that could facilitates the field officers access to stored data in safe and secure manner is developed.

  11. Uncovering robust patterns of microRNA co-expression across cancers using Bayesian Relevance Networks.

    Directory of Open Access Journals (Sweden)

    Parameswaran Ramachandran

    Full Text Available Co-expression networks have long been used as a tool for investigating the molecular circuitry governing biological systems. However, most algorithms for constructing co-expression networks were developed in the microarray era, before high-throughput sequencing-with its unique statistical properties-became the norm for expression measurement. Here we develop Bayesian Relevance Networks, an algorithm that uses Bayesian reasoning about expression levels to account for the differing levels of uncertainty in expression measurements between highly- and lowly-expressed entities, and between samples with different sequencing depths. It combines data from groups of samples (e.g., replicates to estimate group expression levels and confidence ranges. It then computes uncertainty-moderated estimates of cross-group correlations between entities, and uses permutation testing to assess their statistical significance. Using large scale miRNA data from The Cancer Genome Atlas, we show that our Bayesian update of the classical Relevance Networks algorithm provides improved reproducibility in co-expression estimates and lower false discovery rates in the resulting co-expression networks. Software is available at www.perkinslab.ca.

  12. Advance reservation access control using software-defined networking and tokens

    Energy Technology Data Exchange (ETDEWEB)

    Chung, Joaquin; Jung, Eun-Sung; Kettimuthu, Rajkumar; Rao, Nageswara S. V.; Foster, Ian T.; Clark, Russ; Owen, Henry

    2018-02-01

    Advance reservation systems allow users to reserve dedicated bandwidth connection resources from advanced high-speed networks. A common use case for such systems is data transfers in distributed science environments in which a user wants exclusive access to the reservation. However, current advance network reservation methods cannot ensure exclusive access of a network reservation to the specific flow for which the user made the reservation. We present here a novel network architecture that addresses this limitation and ensures that a reservation is used only by the intended flow. We achieve this by leveraging software-defined networking (SDN) and token-based authorization. We use SDN to orchestrate and automate the reservation of networking resources, end-to-end and across multiple administrative domains, and tokens to create a strong binding between the user or application that requested the reservation and the flows provisioned by SDN. We conducted experiments on the ESNet 100G SDN testbed, and demonstrated that our system effectively protects authorized flows from competing traffic in the network. (C) 2017 Elsevier B.V. All rights reserved.

  13. QoS Provisioning Techniques for Future Fiber-Wireless (FiWi Access Networks

    Directory of Open Access Journals (Sweden)

    Martin Maier

    2010-04-01

    Full Text Available A plethora of enabling optical and wireless access-metro network technologies have been emerging that can be used to build future-proof bimodal fiber-wireless (FiWi networks. Hybrid FiWi networks aim at providing wired and wireless quad-play services over the same infrastructure simultaneously and hold great promise to mitigate the digital divide and change the way we live and work by replacing commuting with teleworking. After overviewing enabling optical and wireless network technologies and their QoS provisioning techniques, we elaborate on enabling radio-over-fiber (RoF and radio-and-fiber (R&F technologies. We describe and investigate new QoS provisioning techniques for future FiWi networks, ranging from traffic class mapping, scheduling, and resource management to advanced aggregation techniques, congestion control, and layer-2 path selection algorithms.

  14. On-demand virtual optical network access using 100 Gb/s Ethernet.

    Science.gov (United States)

    Ishida, Osamu; Takamichi, Toru; Arai, Sachine; Kawate, Ryusuke; Toyoda, Hidehiro; Morita, Itsuro; Araki, Soichiro; Ichikawa, Toshiyuki; Hoshida, Takeshi; Murai, Hitoshi

    2011-12-12

    Our Terabit LAN initiatives attempt to enhance the scalability and utilization of lambda resources. This paper describes bandwidth-on-demand virtualized 100GE access to WDM networks on a field fiber test-bed using multi-domain optical-path provisioning. © 2011 Optical Society of America

  15. A three-stage heuristic for harvest scheduling with access road network development

    Science.gov (United States)

    Mark M. Clark; Russell D. Meller; Timothy P. McDonald

    2000-01-01

    In this article we present a new model for the scheduling of forest harvesting with spatial and temporal constraints. Our approach is unique in that we incorporate access road network development into the harvest scheduling selection process. Due to the difficulty of solving the problem optimally, we develop a heuristic that consists of a solution construction stage...

  16. Receiver-initiated medium access control protocols for wireless sensor networks

    DEFF Research Database (Denmark)

    Fafoutis, Xenofon; Di Mauro, Alessio; Vithanage, Madava D.

    2015-01-01

    One of the fundamental building blocks of a Wireless Sensor Network (WSN) is the Medium Access Control (MAC) protocol, that part of the system governing when and how two independent neighboring nodes activate their respective transceivers to directly interact. Historically, data exchange has always...

  17. A hybrid medium access control for convergence of broadband wireless and wireline ATM networks

    DEFF Research Database (Denmark)

    Liu, Hong; Gliese, Ulrik Bo; Dittmann, Lars

    2000-01-01

    In this paper, we propose a hybrid medium access control protocol for supporting broadband integrated services in the wireless ATM networks. The integrated services include CBR, VBR and ABR traffic varying from low bit-rate to very high bit-rate. The proposed protocol is an excellent compromise...

  18. Dynamic optical fiber delivery of Ka-band packet transmissions for wireless access networks

    DEFF Research Database (Denmark)

    Rodríguez Páez, Juan Sebastián; Madsen, Peter; Tafur Monroy, Idelfonso

    2017-01-01

    A Reconfigurable Radio Access Unit is presented and experimentally demonstrated. In the unit, an optical switching system is set to dynamically deliver different packets to different points in the network. The packets are transmitted wirelesslty on the Ka-band (26–40 GHz), achieving BER values...

  19. A Novel Medium Access Control for Ad hoc Networks Based on OFDM System

    Institute of Scientific and Technical Information of China (English)

    YU Yi-fan; YIN Chang-chuan; YUE Guang-xin

    2005-01-01

    Recently, hosts of Medium Access Control (MAC) protocols for Ad hoc radio networks have been proposed to solve the hidden terminal problem and exposed terminal problem. However most of them take into no account the interactions between physical (PHY) system and MAC protocol. Therefore, the current MAC protocols are either inefficient in the networks with mobile nodes and fading channel or difficult in hardware implementation. In this paper, we present a novel media access control for Ad hoc networks that integrates a media access control protocol termed as Dual Busy Tone Multiple Access (DBTMA) into Orthogonal Frequency Division Multiplexing (OFDM) system proposed in IEEE 802.11a standard. The analysis presented in the paper indicates that the proposed MAC scheme achieves performance improvement over IEEE 802.11 protocol about 25%~80% especially in the environment with high mobility and deep fading. The complexity of the proposed scheme is also lower than other implementation of similar busy tone solution. Furthermore, it is compatible with IEEE 802.11a networks.

  20. Community access networks: how to connect the next billion to the ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Community access networks: how to connect the next billion to the Internet ... services is a prerequisite to sustainable socio-economic development. ... It will provide case studies and formulate recommendations with respect to ... An IDRC delegation will join international delegates and city representatives at the ICLEI World ...

  1. Assessing Individual Social Capital Capacity: The Development and Validation of a Network Accessibility Scale

    Science.gov (United States)

    Hatala, John-Paul

    2009-01-01

    Any organization that is able to promote the importance of increased levels of social capital and individuals who can leverage and use the resources that exist within the network may experience higher levels of performance. This study sought to add to our knowledge about individuals' accessing social resources for the purpose of accomplishing…

  2. Knowledge-Based Multiple Access Protocol in Broadband Wireless ATM Networks

    DEFF Research Database (Denmark)

    Liu, Hong; Gliese, Ulrik Bo; Dittmann, Lars

    1999-01-01

    In this paper, we propose a knowledge-based multiple access protocol for the extension of wireline ATM to wireless networks. The objective is to enable effecient transmission of all kinds of ATM traffic in the wireless channel with guaranteed QoS.The proposed protocol utilixes knowledge of the main...... guaranteed QoS requirements to a variety of ATM applications....

  3. Analysis of the Decoupled Access for Downlink and Uplink in Wireless Heterogeneous Networks

    DEFF Research Database (Denmark)

    Smiljkovikj, K.; Popovski, Petar; Gavrilovska, L.

    2015-01-01

    Wireless cellular networks evolve towards a heterogeneous infrastructure, featuring multiple types of Base Stations (BSs), such as Femto BSs (FBSs) and Macro BSs (MBSs). A wireless device observes multiple points (BSs) through which it can access the infrastructure and it may choose to receive th...

  4. Incentive Mechanism for P2P Content Sharing over Heterogenous Access Networks

    Science.gov (United States)

    Sato, Kenichiro; Hashimoto, Ryo; Yoshino, Makoto; Shinkuma, Ryoichi; Takahashi, Tatsuro

    In peer-to-peer (P2P) content sharing, users can share their content by contributing their own resources to one another. However, since there is no incentive for contributing contents or resources to others, users may attempt to obtain content without any contribution. To motivate users to contribute their resources to the service, incentive-rewarding mechanisms have been proposed. On the other hand, emerging wireless technologies, such as IEEE 802.11 wireless local area networks, beyond third generation (B3G) cellular networks and mobile WiMAX, provide high-speed Internet access for wireless users. Using these high-speed wireless access, wireless users can use P2P services and share their content with other wireless users and with fixed users. However, this diversification of access networks makes it difficult to appropriately assign rewards to each user according to their contributions. This is because the cost necessary for contribution is different in different access networks. In this paper, we propose a novel incentive-rewarding mechanism called EMOTIVER that can assign rewards to users appropriately. The proposed mechanism uses an external evaluator and interactive learning agents. We also investigate a way of appropriately controlling rewards based on the system service's quality and managing policy.

  5. Data Archiving and Networked Services (DANS) promotes sustained access to digital research data

    NARCIS (Netherlands)

    van Berchum, M.; Kraaikamp, Emilie

    2015-01-01

    Data Archiving and Networked Services (DANS) promotes sustained access to digital research data. For this purpose, DANS encourages researchers to archive and reuse data in a sustained form. In the online archiving system EASY research data is stored in a permanent and sustainable manner, according

  6. Modeling Accessibility of Screening and Treatment Facilities for Older Adults using Transportation Networks.

    Science.gov (United States)

    Zhang, Qiuyi; Northridge, Mary E; Jin, Zhu; Metcalf, Sara S

    2018-04-01

    Increased lifespans and population growth have resulted in an older U.S. society that must reckon with the complex oral health needs that arise as adults age. Understanding accessibility to screening and treatment facilities for older adults is necessary in order to provide them with preventive and restorative services. This study uses an agent-based model to examine the accessibility of screening and treatment facilities via transportation networks for older adults living in the neighborhoods of northern Manhattan, New York City. Older adults are simulated as socioeconomically distinct agents who move along a GIS-based transportation network using transportation modes that mediate their access to screening and treatment facilities. This simulation model includes four types of mobile agents as a simplifying assumption: walk, by car, by bus, or by van (i.e., a form of transportation assistance for older adults). These mobile agents follow particular routes: older adults who travel by car, bus, and van follow street roads, whereas pedestrians follow walkways. The model enables the user to focus on one neighborhood at a time for analysis. The spatial dimension of an older adult's accessibility to screening and treatment facilities is simulated through the travel costs (indicated by travel time or distance) incurred in the GIS-based model environment, where lower travel costs to screening and treatment facilities imply better access. This model provides a framework for representing health-seeking behavior that is contextualized by a transportation network in a GIS environment.

  7. Cosplicing network analysis of mammalian brain RNA-Seq data utilizing WGCNA and Mantel correlations

    Directory of Open Access Journals (Sweden)

    Ovidiu Dan Iancu

    2015-05-01

    Full Text Available Across species and tissues and especially in the mammalian brain, production of gene isoforms is widespread. While gene expression coordination has been previously described as a scale-free coexpression network, the properties of transcriptome-wide isoform production coordination have been less studied. Here we evaluate the system-level properties of cosplicing in mouse, macaque and human brain gene expression data using a novel network inference procedure. Genes are represented as vectors/lists of exon counts and distance measures sensitive to exon inclusion rates quantifies differences across samples. For all gene pairs, distance matrices are correlated across samples, resulting in cosplicing or co-transcriptional network matrices. We show that networks including cosplicing information are scale-free and distinct from coexpression. In the networks capturing cosplicing we find a set of novel hubs with unique characteristics distinguishing them from coexpression hubs: heavy representation in neurobiological functional pathways, strong overlap with markers of neurons and neuroglia, long coding lengths, and high number of both exons and annotated transcripts. Further, the cosplicing hubs are enriched in genes associated with autism spectrum disorders. Cosplicing hub homologs across eukaryotes show dramatically increasing intronic lengths but stable coding region lengths. Shared transcription factor binding sites increase coexpression but not cosplicing; the reverse is true for splicing-factor binding sites. Genes with protein-protein interactions have strong coexpression and cosplicing. Additional factors affecting the networks include shared microRNA binding sites, spatial colocalization within the striatum, and sharing a chromosomal folding domain. Cosplicing network patterns remain relatively stable across species.

  8. Scalable Active Optical Access Network Using Variable High-Speed PLZT Optical Switch/Splitter

    Science.gov (United States)

    Ashizawa, Kunitaka; Sato, Takehiro; Tokuhashi, Kazumasa; Ishii, Daisuke; Okamoto, Satoru; Yamanaka, Naoaki; Oki, Eiji

    This paper proposes a scalable active optical access network using high-speed Plumbum Lanthanum Zirconate Titanate (PLZT) optical switch/splitter. The Active Optical Network, called ActiON, using PLZT switching technology has been presented to increase the number of subscribers and the maximum transmission distance, compared to the Passive Optical Network (PON). ActiON supports the multicast slot allocation realized by running the PLZT switch elements in the splitter mode, which forces the switch to behave as an optical splitter. However, the previous ActiON creates a tradeoff between the network scalability and the power loss experienced by the optical signal to each user. It does not use the optical power efficiently because the optical power is simply divided into 0.5 to 0.5 without considering transmission distance from OLT to each ONU. The proposed network adopts PLZT switch elements in the variable splitter mode, which controls the split ratio of the optical power considering the transmission distance from OLT to each ONU, in addition to PLZT switch elements in existing two modes, the switching mode and the splitter mode. The proposed network introduces the flexible multicast slot allocation according to the transmission distance from OLT to each user and the number of required users using three modes, while keeping the advantages of ActiON, which are to support scalable and secure access services. Numerical results show that the proposed network dramatically reduces the required number of slots and supports high bandwidth efficiency services and extends the coverage of access network, compared to the previous ActiON, and the required computation time for selecting multicast users is less than 30msec, which is acceptable for on-demand broadcast services.

  9. Partial Interference and Its Performance Impact on Wireless Multiple Access Networks

    Directory of Open Access Journals (Sweden)

    Lau WingCheong

    2010-01-01

    Full Text Available To determine the capacity of wireless multiple access networks, the interference among the wireless links must be accurately modeled. In this paper, we formalize the notion of the partial interference phenomenon observed in many recent wireless measurement studies and establish analytical models with tractable solutions for various types of wireless multiple access networks. In particular, we characterize the stability region of IEEE 802.11 networks under partial interference with two potentially unsaturated links numerically. We also provide a closed-form solution for the stability region of slotted ALOHA networks under partial interference with two potentially unsaturated links and obtain a partial characterization of the boundary of the stability region for the general M-link case. Finally, we derive a closed-form approximated solution for the stability region for general M-link slotted ALOHA system under partial interference effects. Based on our results, we demonstrate that it is important to model the partial interference effects while analyzing wireless multiple access networks. This is because such considerations can result in not only significant quantitative differences in the predicted system capacity but also fundamental qualitative changes in the shape of the stability region of the systems.

  10. Gain transient control for wavelength division multiplexed access networks using semiconductor optical amplifiers

    DEFF Research Database (Denmark)

    Gibbon, Timothy Braidwood; Osadchiy, Alexey Vladimirovich; Kjær, Rasmus

    2009-01-01

    Gain transients can severely hamper the upstream network performance in wavelength division multiplexed (WDM) access networks featuring erbium doped fiber amplifiers (EDFAs) or Raman amplification. We experimentally demonstrate for the first time using 10 Gb/s fiber transmission bit error rate...... measurements how a near-saturated semiconductor optical amplifier (SOA) can be used to control these gain transients. An SOA is shown to reduce the penalty of transients originating in an EDFA from 2.3 dB to 0.2 dB for 10 Gb/s transmission over standard single mode fiber using a 231-1 PRBS pattern. The results...... suggest that a single SOA integrated within a WDM receiver at the metro node could offer a convenient all-optical solution for upstream transient controlin WDM access networks....

  11. Bandwidth Impacts of Localizing Peer-to-Peer IP Video Traffic in Access and Aggregation Networks

    Directory of Open Access Journals (Sweden)

    Kerpez Kenneth

    2008-01-01

    Full Text Available Abstract This paper examines the burgeoning impact of peer-to-peer (P2P traffic IP video traffic. High-quality IPTV or Internet TV has high-bandwidth requirements, and P2P IP video could severely strain broadband networks. A model for the popularity of video titles is given, showing that some titles are very popular and will often be available locally; making localized P2P attractive for video titles. The bandwidth impacts of localizing P2P video to try and keep traffic within a broadband access network area or within a broadband access aggregation network area are examined. Results indicate that such highly localized P2P video can greatly lower core bandwidth usage.

  12. Bandwidth Impacts of Localizing Peer-to-Peer IP Video Traffic in Access and Aggregation Networks

    Directory of Open Access Journals (Sweden)

    Kenneth Kerpez

    2008-10-01

    Full Text Available This paper examines the burgeoning impact of peer-to-peer (P2P traffic IP video traffic. High-quality IPTV or Internet TV has high-bandwidth requirements, and P2P IP video could severely strain broadband networks. A model for the popularity of video titles is given, showing that some titles are very popular and will often be available locally; making localized P2P attractive for video titles. The bandwidth impacts of localizing P2P video to try and keep traffic within a broadband access network area or within a broadband access aggregation network area are examined. Results indicate that such highly localized P2P video can greatly lower core bandwidth usage.

  13. Experimental demonstration of large capacity WSDM optical access network with multicore fibers and advanced modulation formats.

    Science.gov (United States)

    Li, Borui; Feng, Zhenhua; Tang, Ming; Xu, Zhilin; Fu, Songnian; Wu, Qiong; Deng, Lei; Tong, Weijun; Liu, Shuang; Shum, Perry Ping

    2015-05-04

    Towards the next generation optical access network supporting large capacity data transmission to enormous number of users covering a wider area, we proposed a hybrid wavelength-space division multiplexing (WSDM) optical access network architecture utilizing multicore fibers with advanced modulation formats. As a proof of concept, we experimentally demonstrated a WSDM optical access network with duplex transmission using our developed and fabricated multicore (7-core) fibers with 58.7km distance. As a cost-effective modulation scheme for access network, the optical OFDM-QPSK signal has been intensity modulated on the downstream transmission in the optical line terminal (OLT) and it was directly detected in the optical network unit (ONU) after MCF transmission. 10 wavelengths with 25GHz channel spacing from an optical comb generator are employed and each wavelength is loaded with 5Gb/s OFDM-QPSK signal. After amplification, power splitting, and fan-in multiplexer, 10-wavelength downstream signal was injected into six outer layer cores simultaneously and the aggregation downstream capacity reaches 300 Gb/s. -16 dBm sensitivity has been achieved for 3.8 × 10-3 bit error ratio (BER) with 7% Forward Error Correction (FEC) limit for all wavelengths in every core. Upstream signal from ONU side has also been generated and the bidirectional transmission in the same core causes negligible performance degradation to the downstream signal. As a universal platform for wired/wireless data access, our proposed architecture provides additional dimension for high speed mobile signal transmission and we hence demonstrated an upstream delivery of 20Gb/s per wavelength with QPSK modulation formats using the inner core of MCF emulating a mobile backhaul service. The IQ modulated data was coherently detected in the OLT side. -19 dBm sensitivity has been achieved under the FEC limit and more than 18 dB power budget is guaranteed.

  14. Dissection of functional lncRNAs in Alzheimer's disease by construction and analysis of lncRNA-mRNA networks based on competitive endogenous RNAs.

    Science.gov (United States)

    Wang, Lian-Kun; Chen, Xiao-Feng; He, Dan-Dan; Li, You; Fu, Jin

    2017-04-08

    Alzheimer's disease (AD) is a neurodegenerative disorder that is the most common cause of dementia in the elderly, and intracellular neurofibrillary tangles (NFTs) are one of the pathological features of AD. Recent studies have suggested long noncoding RNAs (lncRNAs) play important roles in AD. Competing endogenous RNAs (ceRNAs) is a mechanism that has recently been proposed, in which lncRNAs compete for common miRNA-binding sites with mRNAs. However, the roles of lncRNAs and ceRNA in AD NFTs is limited. In this study, we constructed a global triple network based on ceRNA theory, then an AD NFT lncRNA-mRNA network (NFTLMN) was generated. By analyzing the NFTLMN, three lncRNAs (AP000265.1, KB-1460A1.5 and RP11-145M9.4), which are highly related with AD NFTs were identified. To further explore the cross-talk between mRNAs and lncRNAs, a clustering module analysis was performed on the NFTLMN and two AD NFT related modules were identified. Our study provides a better understanding of the molecular basis of AD NFTs and may offer novel treatment strategies for AD. Copyright © 2016. Published by Elsevier Inc.

  15. Open-Access-Kooperationen in Österreich: Open Access Network Austria und E-Infrastructures Austria – aktuelle Entwicklungen seit 2012

    Directory of Open Access Journals (Sweden)

    Bauer, Bruno

    2014-12-01

    Full Text Available [english] The Berlin Declaration on Open Access to scientific knowledge was published in October 2003. All over the world initiatives and projects were started. However, in Austria Open Access got little attention over many years. This was confirmed by a study among Austrian universities on behalf of the Council of Austrian University Libraries. Finally at the turn of the year 2012/2013 the Open Access Network Austria and the university infrastructure project E-Infrastructure Austria were started to push Open Access in Austria on a national level. So 10 years after the Berlin Declaration Austria set up the preconditions to establish sustainable Open Access.

  16. Highly Reliable PON Optical Splitters for Optical Access Networks in Outside Environments

    Science.gov (United States)

    Watanabe, Hiroshi; Araki, Noriyuki; Fujimoto, Hisashi

    Broadband optical access services are spreading throughout the world, and the number of fiber to the home (FTTH) subscribers is increasing rapidly. Telecom operators are constructing passive optical networks (PONs) to provide optical access services. Externally installed optical splitters for PONs are very important passive devices in optical access networks, and they must provide satisfactory performance as outdoor plant over long periods. Therefore, we calculate the failure rate of optical access networks and assign a failure rate to the optical splitters in optical access networks. The maximum cumulative failure rate of 1 × 8 optical splitters was calculated as 0.025 for an optical access fiber length of 2.1km and a 20-year operating lifetime. We examined planar lightwave circuit (PLC) type optical splitters for use as outside plant in terms of their optical characteristics and environmental reliability. We confirmed that PLC type optical splitters have sufficient optical performance for a PON splitter and sufficient reliability as outside plant in accordance with ITU-T standard values. We estimated the lifetimes of three kinds of PLC type optical splitters by using accelerated aging tests. The estimated failure rate of these splitters installed in optical access networks was below the target value for the cumulative failure rate, and we confirmed that they have sufficient reliability to maintain the quality of the network service. We developed 1 × 8 optical splitter modules with plug and socket type optical connectors and optical fiber cords for optical aerial closures designed for use as outside plant. These technologies make it easy to install optical splitters in an aerial optical closure. The optical splitter modules have sufficient optical performance levels for PONs because the insertion loss at the commercially used wavelengths of 1.31 and 1.55µm is less than the criterion established by ITU-T Recommendation G.671 for optical splitters. We performed a

  17. A Poisson Log-Normal Model for Constructing Gene Covariation Network Using RNA-seq Data.

    Science.gov (United States)

    Choi, Yoonha; Coram, Marc; Peng, Jie; Tang, Hua

    2017-07-01

    Constructing expression networks using transcriptomic data is an effective approach for studying gene regulation. A popular approach for constructing such a network is based on the Gaussian graphical model (GGM), in which an edge between a pair of genes indicates that the expression levels of these two genes are conditionally dependent, given the expression levels of all other genes. However, GGMs are not appropriate for non-Gaussian data, such as those generated in RNA-seq experiments. We propose a novel statistical framework that maximizes a penalized likelihood, in which the observed count data follow a Poisson log-normal distribution. To overcome the computational challenges, we use Laplace's method to approximate the likelihood and its gradients, and apply the alternating directions method of multipliers to find the penalized maximum likelihood estimates. The proposed method is evaluated and compared with GGMs using both simulated and real RNA-seq data. The proposed method shows improved performance in detecting edges that represent covarying pairs of genes, particularly for edges connecting low-abundant genes and edges around regulatory hubs.

  18. ALPHA: Proposal of Mapping QoS Parameters between UPnP Home Network and GMPLS Access

    DEFF Research Database (Denmark)

    Brewka, Lukasz Jerzy; Sköldström, Pontus; Gavler, Anders

    2011-01-01

    This paper is treating the interdomain QoS signaling between the home and access domains with a focus on applying it for providing QoS between a UPnP-QoS based home network and GMPLS based access network. The work presented here is defining a possible approach for an interface between UPn...

  19. Yeast ribonuclease III uses a network of multiple hydrogen bonds for RNA binding and cleavage.

    Science.gov (United States)

    Lavoie, Mathieu; Abou Elela, Sherif

    2008-08-19

    Members of the bacterial RNase III family recognize a variety of short structured RNAs with few common features. It is not clear how this group of enzymes supports high cleavage fidelity while maintaining a broad base of substrates. Here we show that the yeast orthologue of RNase III (Rnt1p) uses a network of 2'-OH-dependent interactions to recognize substrates with different structures. We designed a series of bipartite substrates permitting the distinction between binding and cleavage defects. Each substrate was engineered to carry a single or multiple 2'- O-methyl or 2'-fluoro ribonucleotide substitutions to prevent the formation of hydrogen bonds with a specific nucleotide or group of nucleotides. Interestingly, introduction of 2'- O-methyl ribonucleotides near the cleavage site increased the rate of catalysis, indicating that 2'-OH are not required for cleavage. Substitution of nucleotides in known Rnt1p binding site with 2'- O-methyl ribonucleotides inhibited cleavage while single 2'-fluoro ribonucleotide substitutions did not. This indicates that while no single 2'-OH is essential for Rnt1p cleavage, small changes in the substrate structure are not tolerated. Strikingly, several nucleotide substitutions greatly increased the substrate dissociation constant with little or no effect on the Michaelis-Menten constant or rate of catalysis. Together, the results indicate that Rnt1p uses a network of nucleotide interactions to identify its substrate and support two distinct modes of binding. One mode is primarily mediated by the dsRNA binding domain and leads to the formation of stable RNA/protein complex, while the other requires the presence of the nuclease and N-terminal domains and leads to RNA cleavage.

  20. Access, engagement, networks, and norms: Dimensions of social capital at work in a first grade classroom

    Science.gov (United States)

    Wexler-Robock, Stephanie

    Social capital refers to access and use of resources available through one's networks to solve problems, and the norms that reflect inclusive or exclusive access to those networks and resources. Research has found positive relationships between social capital, academic achievement, and attainment. Studies, however, have generally examined social capital through factors that occur outside the classroom; students who have social capital, acquired through their family and community relationships, seem to be more successful academically. Limited research has explored what if any factors within the classroom might impact the production, and nature of social capital, or its workings in a classroom. The purpose of this study was to explore the workings and nature of classroom social capital, including its possible relationships to engagement and cognition among 5 student participants. Using methods of qualitative data collection, mixed methods were used to analyze information resources, participants' networking, student work, and classroom discourse. Eight interdependent networking factors and 3 overarching patterns of norms were discovered. The networking factors reflected the structure, content, processes, purposes, and acceptability of participants' networking. The norms, also working interdependently, appeared to promote or inhibit among other things, engagement in networking, help seeking, access, sharing, and intertextual use of diverse, often complex sources of information. Through interaction of the 8 factors and 3 overarching norms, ongoing outcomes of networking appeared to include the creation of bridging (inclusive) and bonding (exclusive) forms of social capital, and depth of scientific conceptual understanding, in this case, about birds. Bridging social capital appeared related to willingness to engage in strong and weak tie networking, help seeking, intertextuality, and possibly to mastery goal orientation for all participants, regardless of reading level

  1. Heterogeneous wireless/wireline optical access networks with the R-EAT as backend component

    Science.gov (United States)

    Hagedorn, Klaus; Gindera, Ralf; Stohr, Andreas; Jager, Dieter

    2004-09-01

    A heterogeneous wireless/wireline optical transmission link using a reflection type electroabsorption transceiver (R-EAT) is presented. Simultaneous transmission of full-duplex broadband wireless LAN (WLAN) channels and 1Gb/s base band data is experimentally demonstrated. The system link employs sub-carrier multiplexing (SCM) and two optical channels for full duplex transmission of various analog WLAN channels and downlink digital base band data. The developed link architecture is suitable for simultaneous transmission of broadband wireline and wireless signals, it enables the coexistence and interoperability between wireline and wireless access technologies. The developed R-EAT component employed in this wireline/wireless access system, features "single-chip-component" base stations in access networks with star type topology where only a single optical fiber is used for bidirectional optical transmission. The R-EAT can be used within the optical C-band (1530- 1560nm) and is suitable for (D)WDM networks. Bit error rate measurements demonstrate the capabilities of the R-EAT for 1Gb/s base band transmission. The analog performance for WLAN transmission is characterised by a spurious free dynamic range (SFDR) of more than 75dB and 90dB for uplink and downlink transmission, respectively. The link gain for uplink and downlink transmission is -42dB and -37dB, respectively. The demonstrates the analog performances of the R-EAT for being used in wireless access networks such as W-LAN.

  2. Quality of Recovery Evaluation of the Protection Schemes for Fiber-Wireless Access Networks

    Science.gov (United States)

    Fu, Minglei; Chai, Zhicheng; Le, Zichun

    2016-03-01

    With the rapid development of fiber-wireless (FiWi) access network, the protection schemes have got more and more attention due to the risk of huge data loss when failures occur. However, there are few studies on the performance evaluation of the FiWi protection schemes by the unified evaluation criterion. In this paper, quality of recovery (QoR) method was adopted to evaluate the performance of three typical protection schemes (MPMC scheme, OBOF scheme and RPMF scheme) against the segment-level failure in FiWi access network. The QoR models of the three schemes were derived in terms of availability, quality of backup path, recovery time and redundancy. To compare the performance of the three protection schemes comprehensively, five different classes of network services such as emergency service, prioritized elastic service, conversational service, etc. were utilized by means of assigning different QoR weights. Simulation results showed that, for the most service cases, RPMF scheme was proved to be the best solution to enhance the survivability when planning the FiWi access network.

  3. An Adaptive Channel Access Method for Dynamic Super Dense Wireless Sensor Networks.

    Science.gov (United States)

    Lei, Chunyang; Bie, Hongxia; Fang, Gengfa; Zhang, Xuekun

    2015-12-03

    Super dense and distributed wireless sensor networks have become very popular with the development of small cell technology, Internet of Things (IoT), Machine-to-Machine (M2M) communications, Vehicular-to-Vehicular (V2V) communications and public safety networks. While densely deployed wireless networks provide one of the most important and sustainable solutions to improve the accuracy of sensing and spectral efficiency, a new channel access scheme needs to be designed to solve the channel congestion problem introduced by the high dynamics of competing nodes accessing the channel simultaneously. In this paper, we firstly analyzed the channel contention problem using a novel normalized channel contention analysis model which provides information on how to tune the contention window according to the state of channel contention. We then proposed an adaptive channel contention window tuning algorithm in which the contention window tuning rate is set dynamically based on the estimated channel contention level. Simulation results show that our proposed adaptive channel access algorithm based on fast contention window tuning can achieve more than 95 % of the theoretical optimal throughput and 0 . 97 of fairness index especially in dynamic and dense networks.

  4. An Adaptive Channel Access Method for Dynamic Super Dense Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Chunyang Lei

    2015-12-01

    Full Text Available Super dense and distributed wireless sensor networks have become very popular with the development of small cell technology, Internet of Things (IoT, Machine-to-Machine (M2M communications, Vehicular-to-Vehicular (V2V communications and public safety networks. While densely deployed wireless networks provide one of the most important and sustainable solutions to improve the accuracy of sensing and spectral efficiency, a new channel access scheme needs to be designed to solve the channel congestion problem introduced by the high dynamics of competing nodes accessing the channel simultaneously. In this paper, we firstly analyzed the channel contention problem using a novel normalized channel contention analysis model which provides information on how to tune the contention window according to the state of channel contention. We then proposed an adaptive channel contention window tuning algorithm in which the contention window tuning rate is set dynamically based on the estimated channel contention level. Simulation results show that our proposed adaptive channel access algorithm based on fast contention window tuning can achieve more than 95 % of the theoretical optimal throughput and 0 . 97 of fairness index especially in dynamic and dense networks.

  5. Optical interconnection network for parallel access to multi-rank memory in future computing systems.

    Science.gov (United States)

    Wang, Kang; Gu, Huaxi; Yang, Yintang; Wang, Kun

    2015-08-10

    With the number of cores increasing, there is an emerging need for a high-bandwidth low-latency interconnection network, serving core-to-memory communication. In this paper, aiming at the goal of simultaneous access to multi-rank memory, we propose an optical interconnection network for core-to-memory communication. In the proposed network, the wavelength usage is delicately arranged so that cores can communicate with different ranks at the same time and broadcast for flow control can be achieved. A distributed memory controller architecture that works in a pipeline mode is also designed for efficient optical communication and transaction address processes. The scaling method and wavelength assignment for the proposed network are investigated. Compared with traditional electronic bus-based core-to-memory communication, the simulation results based on the PARSEC benchmark show that the bandwidth enhancement and latency reduction are apparent.

  6. A novel and efficient user access control scheme for wireless body area sensor networks

    Directory of Open Access Journals (Sweden)

    Santanu Chatterjee

    2014-07-01

    Full Text Available Wireless body area networks (WBANs can be applied to provide healthcare and patient monitoring. However, patient privacy can be vulnerable in a WBAN unless security is considered. Access to authorized users for the correct information and resources for different services can be provided with the help of efficient user access control mechanisms. This paper proposes a new user access control scheme for a WBAN. The proposed scheme makes use of a group-based user access ID, an access privilege mask, and a password. An elliptic curve cryptography-based public key cryptosystem is used to ensure that a particular legitimate user can only access the information for which he/she is authorized. We show that our scheme performs better than previously existing user access control schemes. Through a security analysis, we show that our scheme is secure against possible known attacks. Furthermore, through a formal security verification using the AVISPA (Automated Validation of Internet Security Protocols and Applications tool, we show that our scheme is also secure against passive and active attacks.

  7. Tractable Stochastic Geometry Model for IoT Access in LTE Networks

    KAUST Repository

    Gharbieh, Mohammad; Elsawy, Hesham; Bader, Ahmed; Alouini, Mohamed-Slim

    2017-01-01

    The Internet of Things (IoT) is large-scale by nature. This is not only manifested by the large number of connected devices, but also by the high volumes of traffic that must be accommodated. Cellular networks are indeed a natural candidate for the data tsunami the IoT is expected to generate in conjunction with legacy human-type traffic. However, the random access process for scheduling request represents a major bottleneck to support IoT via LTE cellular networks. Accordingly, this paper develops a mathematical framework to model and study the random access channel (RACH) scalability to accommodate IoT traffic. The developed model is based on stochastic geometry and discrete time Markov chains (DTMC) to account for different access strategies and possible sources of inter-cell and intra-cell interferences. To this end, the developed model is utilized to assess and compare three different access strategies, which incorporate a combination of transmission persistency, back-off, and power ramping. The analysis and the results showcased herewith clearly illustrate the vulnerability of the random access procedure as the IoT intensity grows. Finally, the paper offers insights into effective scenarios for each transmission strategy in terms of IoT intensity and RACH detection thresholds.

  8. Switched-based interference reduction scheme for open-access overlaid cellular networks

    KAUST Repository

    Radaydeh, Redha Mahmoud Mesleh

    2012-06-01

    Femtocells have been proposed to enhance the spatial coverage and system capacity of existing cellular networks. However, this technology may result in significant performance loss due to the increase in co-channel interference, particularly when coordination between access points is infeasible. This paper targets interference management in such overlaid networks. It is assumed that the femtocells employ the open-access strategy to reduce cross-tier interference, and can share resources concurrently. It is also assumed that each end user (EU) can access one channel at a time, and transfer limited feedback. To reduce the effect of co-tier interference in the absence of the desired EU channel state information (CSI) at the serving access point as well as coordination between active access points, a switched scheme based on the interference levels associated with available channels is proposed. Through the analysis, the scheme modes of operation in under-loaded and over-loaded channels are studied, from which the statistics of the resulting interference power are quantified. The impact of the proposed scheme on the received desired power is thoroughly discussed. In addition, the effect of the switching threshold on the achieved performance of the desired EU is investigated. The results clarify that the proposed scheme can improve the performance while reducing the number of examined channels and feedback load. © 2012 IEEE.

  9. Tractable Stochastic Geometry Model for IoT Access in LTE Networks

    KAUST Repository

    Gharbieh, Mohammad

    2017-02-07

    The Internet of Things (IoT) is large-scale by nature. This is not only manifested by the large number of connected devices, but also by the high volumes of traffic that must be accommodated. Cellular networks are indeed a natural candidate for the data tsunami the IoT is expected to generate in conjunction with legacy human-type traffic. However, the random access process for scheduling request represents a major bottleneck to support IoT via LTE cellular networks. Accordingly, this paper develops a mathematical framework to model and study the random access channel (RACH) scalability to accommodate IoT traffic. The developed model is based on stochastic geometry and discrete time Markov chains (DTMC) to account for different access strategies and possible sources of inter-cell and intra-cell interferences. To this end, the developed model is utilized to assess and compare three different access strategies, which incorporate a combination of transmission persistency, back-off, and power ramping. The analysis and the results showcased herewith clearly illustrate the vulnerability of the random access procedure as the IoT intensity grows. Finally, the paper offers insights into effective scenarios for each transmission strategy in terms of IoT intensity and RACH detection thresholds.

  10. PANATIKI: A Network Access Control Implementation Based on PANA for IoT Devices

    Directory of Open Access Journals (Sweden)

    Antonio F. Gomez Skarmeta

    2013-11-01

    Full Text Available Internet of Things (IoT networks are the pillar of recent novel scenarios, such as smart cities or e-healthcare applications. Among other challenges, these networks cover the deployment and interaction of small devices with constrained capabilities and Internet protocol (IP-based networking connectivity. These constrained devices usually require connection to the Internet to exchange information (e.g., management or sensing data or access network services. However, only authenticated and authorized devices can, in general, establish this connection. The so-called authentication, authorization and accounting (AAA services are in charge of performing these tasks on the Internet. Thus, it is necessary to deploy protocols that allow constrained devices to verify their credentials against AAA infrastructures. The Protocol for Carrying Authentication for Network Access (PANA has been standardized by the Internet engineering task force (IETF to carry the Extensible Authentication Protocol (EAP, which provides flexible authentication upon the presence of AAA. To the best of our knowledge, this paper is the first deep study of the feasibility of EAP/PANA for network access control in constrained devices. We provide light-weight versions and implementations of these protocols to fit them into constrained devices. These versions have been designed to reduce the impact in standard specifications. The goal of this work is two-fold: (1 to demonstrate the feasibility of EAP/PANA in IoT devices; (2 to provide the scientific community with the first light-weight interoperable implementation of EAP/PANA for constrained devices in the Contiki operating system (Contiki OS, called PANATIKI. The paper also shows a testbed, simulations and experimental results obtained from real and simulated constrained devices.

  11. PANATIKI: a network access control implementation based on PANA for IoT devices.

    Science.gov (United States)

    Moreno Sanchez, Pedro; Marin Lopez, Rafa; Gomez Skarmeta, Antonio F

    2013-11-01

    Internet of Things (IoT) networks are the pillar of recent novel scenarios, such as smart cities or e-healthcare applications. Among other challenges, these networks cover the deployment and interaction of small devices with constrained capabilities and Internet protocol (IP)-based networking connectivity. These constrained devices usually require connection to the Internet to exchange information (e.g., management or sensing data) or access network services. However, only authenticated and authorized devices can, in general, establish this connection. The so-called authentication, authorization and accounting (AAA) services are in charge of performing these tasks on the Internet. Thus, it is necessary to deploy protocols that allow constrained devices to verify their credentials against AAA infrastructures. The Protocol for Carrying Authentication for Network Access (PANA) has been standardized by the Internet engineering task force (IETF) to carry the Extensible Authentication Protocol (EAP), which provides flexible authentication upon the presence of AAA. To the best of our knowledge, this paper is the first deep study of the feasibility of EAP/PANA for network access control in constrained devices. We provide light-weight versions and implementations of these protocols to fit them into constrained devices. These versions have been designed to reduce the impact in standard specifications. The goal of this work is two-fold: (1) to demonstrate the feasibility of EAP/PANA in IoT devices; (2) to provide the scientific community with the first light-weight interoperable implementation of EAP/PANA for constrained devices in the Contiki operating system (Contiki OS), called PANATIKI. The paper also shows a testbed, simulations and experimental results obtained from real and simulated constrained devices.

  12. Topology-selective jamming of fully-connected, code-division random-access networks

    Science.gov (United States)

    Polydoros, Andreas; Cheng, Unjeng

    1990-01-01

    The purpose is to introduce certain models of topology selective stochastic jamming and examine its impact on a class of fully-connected, spread-spectrum, slotted ALOHA-type random access networks. The theory covers dedicated as well as half-duplex units. The dominant role of the spatial duty factor is established, and connections with the dual concept of time selective jamming are discussed. The optimal choices of coding rate and link access parameters (from the users' side) and the jamming spatial fraction are numerically established for DS and FH spreading.

  13. Performance Analysis of DPSK-OCDMA System for Optical Access Network

    Science.gov (United States)

    Islam, Monirul; Ahmed, N.; Aljunid, S. A.; Ali, Sharafat; Sayeed, S.; Sabri, Naseer

    2016-03-01

    In this research, the performance of optical code division multiple access (OCDMA) using differential phase shift keying (DPSK) has been compared with OCDMA On-Off Keying (OOK). This comparison took place in terms of bit error rate (BER) and receiver power where two bit rates (155 Mbps and 622 Mbps) have been used for this analysis. Using of OptiSystem 7.0 simulation, comparing eye diagram and optical spectrum alongside with BER and Rx power. It is found that OCDMA-DPSK performs better in comparison to OCDMA-OOK. The performance analysis also provides parameter for designing and development of an OCDMA system for optical access network using DPSK.

  14. An Adaptive Time-Spread Multiple-Access Policy for Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Konstantinos Oikonomou

    2007-05-01

    Full Text Available Sensor networks require a simple and efficient medium access control policy achieving high system throughput with no or limited control overhead in order to increase the network lifetime by minimizing the energy consumed during transmission attempts. Time-spread multiple-access (TSMA policies that have been proposed for ad hoc network environments, can also be employed in sensor networks, since no control overhead is introduced. However, they do not take advantage of any cross-layer information in order to exploit the idiosyncrasies of the particular sensor network environment such as the presence of typically static nodes and a common destination for the forwarded data. An adaptive probabilistic TSMA-based policy, that is proposed and analyzed in this paper, exploits these idiosyncrasies and achieves higher system throughput than the existing TSMA-based policies without any need for extra control overhead. As it is analytically shown in this paper, the proposed policy always outperforms the existing TSMA-based policies, if certain parameter values are properly set; the analysis also provides for these proper values. It is also shown that the proposed policy is characterized by a certain convergence period and that high system throughput is achieved for long convergence periods. The claims and expectations of the provided analysis are supported by simulation results presented in this paper.

  15. Accounting for Energy Cost When Designing Energy-Efficient Wireless Access Networks

    Directory of Open Access Journals (Sweden)

    Greta Vallero

    2018-03-01

    Full Text Available Because of the increase of the data traffic demand, wireless access networks, through which users access telecommunication services, have expanded, in terms of size and of capability and, consequently, in terms of power consumption. Therefore, costs to buy the necessary power for the supply of base stations of those networks is becoming very high, impacting the communication cost. In this study, strategies to reduce the amount of money spent for the purchase of the energy consumed by the base stations are proposed for a network powered by solar panels, energy batteries and the power grid. First, the variability of the energy prices is exploited. It provides a cost reduction of up to 30%, when energy is bought in advance. If a part of the base stations is deactivated when the energy price is higher than a given threshold, a compromise between the energy cost and the user coverage drop is needed. In the simulated scenario, the necessary energy cost can be reduced by more than 40%, preserving the user coverage by greater than 94%. Second, the network is introduced to the energy market: it buys and sells energy from/to the traditional power grid. Finally, costs are reduced by the reduction of power consumption of the network, achieved by using microcell base stations. In the considered scenario, up to a 31% cost reduction is obtained, without the deterioration of the quality of service, but a huge Capex expenditure is required.

  16. Comparison of a Ring On-Chip Network and a Code-Division Multiple-Access On-Chip Network

    Directory of Open Access Journals (Sweden)

    Xin Wang

    2007-01-01

    Full Text Available Two network-on-chip (NoC designs are examined and compared in this paper. One design applies a bidirectional ring connection scheme, while the other design applies a code-division multiple-access (CDMA connection scheme. Both of the designs apply globally asynchronous locally synchronous (GALS scheme in order to deal with the issue of transferring data in a multiple-clock-domain environment of an on-chip system. The two NoC designs are compared with each other by their network structures, data transfer principles, network node structures, and their asynchronous designs. Both the synchronous and the asynchronous designs of the two on-chip networks are realized using a hardware-description language (HDL in order to make the entire designs suit the commonly used synchronous design tools and flow. The performance estimation and comparison of the two NoC designs which are based on the HDL realizations are addressed. By comparing the two NoC designs, the advantages and disadvantages of applying direct connection and CDMA connection schemes in an on-chip communication network are discussed.

  17. Coherent detection passive optical access network enabling converged delivery of broadcast and dedicated broadband services

    DEFF Research Database (Denmark)

    Osadchiy, Alexey Vladimirovich; Prince, Kamau; Guerrero Gonzalez, Neil

    2011-01-01

    We propose a passive optical network architecture based on coherent detection for converged delivery of broadcast services from a dedicated remote broadcast server and user-specific services from a local central office. We experimentally demonstrate this architecture with mixed traffic types....... The broadcast channels were transmitted over 78 km of single mode fiber to a central office where they were multiplexed with the unicast channels for further fiber transmission over 34-km to reach the access network. Successful detection of all channels is demonstrated....

  18. Improving collaboration between primary care research networks using Access Grid technology

    Directory of Open Access Journals (Sweden)

    Zsolt Nagykaldi

    2008-05-01

    Full Text Available Access Grid (AG is an Internet2-driven, high performance audio_visual conferencing technology used worldwide by academic and government organisations to enhance communication, human interaction and group collaboration. AG technology is particularly promising for improving academic multi-centre research collaborations. This manuscript describes how the AG technology was utilised by the electronic Primary Care Research Network (ePCRN that is part of the National Institutes of Health (NIH Roadmap initiative to improve primary care research and collaboration among practice- based research networks (PBRNs in the USA. It discusses the design, installation and use of AG implementations, potential future applications, barriers to adoption, and suggested solutions.

  19. New resource allocation scheme for cognitive relay networks with opportunistic access

    KAUST Repository

    Zafar, Ammar

    2012-06-01

    In this paper, a new resource allocation scheme to minimize Symbol Error rate (SER) for relay assisted cognitive radio networks is studied. A cognitive relay network with amplify-and-forward (AF) fixed gain relays and opportunistic access to the licensed spectrum is considered. The SER objective function and the optimization constraints are derived first. The resource allocation algorithm is then derived using the Langrangian multiplier method. Closed form expressions are derived for the source and relay powers and, symbol time. Analytical results show that the optimal power allocation follows an extended water-filling solution. © 2012 IEEE.

  20. Medium access control and network layer design for 60 GHz wireless personal area networks

    NARCIS (Netherlands)

    An, X.

    2010-01-01

    The unlicensed frequency band around 60 GHz is a very promising spectrum due to its potential to provide multiple gigabits per second based data rates for short range wireless communication. Hence, 60 GHz radio is an attractive candidate to enable ultra high rate Wireless Personal Area Networks

  1. Dissecting the expression relationships between RNA-binding proteins and their cognate targets in eukaryotic post-transcriptional regulatory networks

    Science.gov (United States)

    Nishtala, Sneha; Neelamraju, Yaseswini; Janga, Sarath Chandra

    2016-05-01

    RNA-binding proteins (RBPs) are pivotal in orchestrating several steps in the metabolism of RNA in eukaryotes thereby controlling an extensive network of RBP-RNA interactions. Here, we employed CLIP (cross-linking immunoprecipitation)-seq datasets for 60 human RBPs and RIP-ChIP (RNP immunoprecipitation-microarray) data for 69 yeast RBPs to construct a network of genome-wide RBP- target RNA interactions for each RBP. We show in humans that majority (~78%) of the RBPs are strongly associated with their target transcripts at transcript level while ~95% of the studied RBPs were also found to be strongly associated with expression levels of target transcripts when protein expression levels of RBPs were employed. At transcript level, RBP - RNA interaction data for the yeast genome, exhibited a strong association for 63% of the RBPs, confirming the association to be conserved across large phylogenetic distances. Analysis to uncover the features contributing to these associations revealed the number of target transcripts and length of the selected protein-coding transcript of an RBP at the transcript level while intensity of the CLIP signal, number of RNA-Binding domains, location of the binding site on the transcript, to be significant at the protein level. Our analysis will contribute to improved modelling and prediction of post-transcriptional networks.

  2. Convergent optical wired and wireless long-reach access network using high spectral-efficient modulation.

    Science.gov (United States)

    Chow, C W; Lin, Y H

    2012-04-09

    To provide broadband services in a single and low cost perform, the convergent optical wired and wireless access network is promising. Here, we propose and demonstrate a convergent optical wired and wireless long-reach access networks based on orthogonal wavelength division multiplexing (WDM). Both the baseband signal and the radio-over-fiber (ROF) signal are multiplexed and de-multiplexed in optical domain, hence it is simple and the operation speed is not limited by the electronic bottleneck caused by the digital signal processing (DSP). Error-free de-multiplexing and down-conversion can be achieved for all the signals after 60 km (long-reach) fiber transmission. The scalability of the system for higher bit-rate (60 GHz) is also simulated and discussed.

  3. Integrated mRNA and microRNA transcriptome sequencing characterizes sequence variants and mRNA–microRNA regulatory network in nasopharyngeal carcinoma model systems

    Directory of Open Access Journals (Sweden)

    Carol Ying-Ying Szeto

    2014-01-01

    Full Text Available Nasopharyngeal carcinoma (NPC is a prevalent malignancy in Southeast Asia among the Chinese population. Aberrant regulation of transcripts has been implicated in many types of cancers including NPC. Herein, we characterized mRNA and miRNA transcriptomes by RNA sequencing (RNASeq of NPC model systems. Matched total mRNA and small RNA of undifferentiated Epstein–Barr virus (EBV-positive NPC xenograft X666 and its derived cell line C666, well-differentiated NPC cell line HK1, and the immortalized nasopharyngeal epithelial cell line NP460 were sequenced by Solexa technology. We found 2812 genes and 149 miRNAs (human and EBV to be differentially expressed in NP460, HK1, C666 and X666 with RNASeq; 533 miRNA–mRNA target pairs were inversely regulated in the three NPC cell lines compared to NP460. Integrated mRNA/miRNA expression profiling and pathway analysis show extracellular matrix organization, Beta-1 integrin cell surface interactions, and the PI3K/AKT, EGFR, ErbB, and Wnt pathways were potentially deregulated in NPC. Real-time quantitative PCR was performed on selected mRNA/miRNAs in order to validate their expression. Transcript sequence variants such as short insertions and deletions (INDEL, single nucleotide variant (SNV, and isomiRs were characterized in the NPC model systems. A novel TP53 transcript variant was identified in NP460, HK1, and C666. Detection of three previously reported novel EBV-encoded BART miRNAs and their isomiRs were also observed. Meta-analysis of a model system to a clinical system aids the choice of different cell lines in NPC studies. This comprehensive characterization of mRNA and miRNA transcriptomes in NPC cell lines and the xenograft provides insights on miRNA regulation of mRNA and valuable resources on transcript variation and regulation in NPC, which are potentially useful for mechanistic and preclinical studies.

  4. Centralized light-source optical access network based on polarization multiplexing.

    Science.gov (United States)

    Grassi, Fulvio; Mora, José; Ortega, Beatriz; Capmany, José

    2010-03-01

    This paper presents and demonstrates a centralized light source optical access network based on optical polarization multiplexing technique. By using two optical sources emitting light orthogonally polarized in the Central Node for downstream and upstream operations, the Remote Node is kept source-free. EVM values below telecommunication standard requirements have been measured experimentally when bidirectional digital signals have been transmitted over 10 km of SMF employing subcarrier multiplexing technique in the electrical domain.

  5. Self-optimized admission control for multi-tenant radio access networks

    OpenAIRE

    Pérez Romero, Jordi; Sallent Roig, José Oriol; Ferrús Ferré, Ramón Antonio; Agustí Comes, Ramon

    2018-01-01

    © 2017 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes,creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works. Multi-tenant Radio Access Networks (RANs) are envisaged to play a key role in highly dense scenarios for fulfil...

  6. Accessibility

    DEFF Research Database (Denmark)

    Brooks, Anthony Lewis

    2017-01-01

    This contribution is timely as it addresses accessibility in regards system hardware and software aligned with introduction of the Twenty-First Century Communications and Video Accessibility Act (CVAA) and adjoined game industry waiver that comes into force January 2017. This is an act created...... by the USA Federal Communications Commission (FCC) to increase the access of persons with disabilities to modern communications, and for other purposes. The act impacts advanced communications services and products including text messaging; e-mail; instant messaging; video communications; browsers; game...... platforms; and games software. However, the CVAA has no legal status in the EU. This text succinctly introduces and questions implications, impact, and wider adoption. By presenting the full CVAA and game industry waiver the text targets to motivate discussions and further publications on the subject...

  7. Cognitive Self-Scheduled Mechanism for Access Control in Noisy Vehicular Ad Hoc Networks

    Directory of Open Access Journals (Sweden)

    Mario Manzano

    2015-01-01

    Full Text Available Within the challenging environment of intelligent transportation systems (ITS, networked control systems such as platooning guidance of autonomous vehicles require innovative mechanisms to provide real-time communications. Although several proposals are currently under discussion, the design of a rapid, efficient, flexible, and reliable medium access control mechanism which meets the specific constraints of such real-time communications applications remains unsolved in this highly dynamic environment. However, cognitive radio (CR combines the capacity to sense the radio spectrum with the flexibility to adapt to transmission parameters in order to maximize system performance and has thus become an effective approach for the design of dynamic spectrum access (DSA mechanisms. This paper presents the enhanced noncooperative cognitive division multiple access (ENCCMA proposal combining time division multiple access (TDMA and frequency division multiple access (FDMA schemes with CR techniques to obtain a mechanism fulfilling the requirements of real-time communications. The analysis presented here considers the IEEE WAVE and 802.11p as reference standards; however, the proposed medium access control (MAC mechanism can be adapted to operate on the physical layer of different standards. The mechanism also offers the advantage of avoiding signaling, thus enhancing system autonomy as well as behavior in adverse scenarios.

  8. Trust-Based Access Control Model from Sociological Approach in Dynamic Online Social Network Environment

    Science.gov (United States)

    Kim, Seungjoo

    2014-01-01

    There has been an explosive increase in the population of the OSN (online social network) in recent years. The OSN provides users with many opportunities to communicate among friends and family. Further, it facilitates developing new relationships with previously unknown people having similar beliefs or interests. However, the OSN can expose users to adverse effects such as privacy breaches, the disclosing of uncontrolled material, and the disseminating of false information. Traditional access control models such as MAC, DAC, and RBAC are applied to the OSN to address these problems. However, these models are not suitable for the dynamic OSN environment because user behavior in the OSN is unpredictable and static access control imposes a burden on the users to change the access control rules individually. We propose a dynamic trust-based access control for the OSN to address the problems of the traditional static access control. Moreover, we provide novel criteria to evaluate trust factors such as sociological approach and evaluate a method to calculate the dynamic trust values. The proposed method can monitor negative behavior and modify access permission levels dynamically to prevent the indiscriminate disclosure of information. PMID:25374943

  9. Trust-Based Access Control Model from Sociological Approach in Dynamic Online Social Network Environment

    Directory of Open Access Journals (Sweden)

    Seungsoo Baek

    2014-01-01

    Full Text Available There has been an explosive increase in the population of the OSN (online social network in recent years. The OSN provides users with many opportunities to communicate among friends and family. Further, it facilitates developing new relationships with previously unknown people having similar beliefs or interests. However, the OSN can expose users to adverse effects such as privacy breaches, the disclosing of uncontrolled material, and the disseminating of false information. Traditional access control models such as MAC, DAC, and RBAC are applied to the OSN to address these problems. However, these models are not suitable for the dynamic OSN environment because user behavior in the OSN is unpredictable and static access control imposes a burden on the users to change the access control rules individually. We propose a dynamic trust-based access control for the OSN to address the problems of the traditional static access control. Moreover, we provide novel criteria to evaluate trust factors such as sociological approach and evaluate a method to calculate the dynamic trust values. The proposed method can monitor negative behavior and modify access permission levels dynamically to prevent the indiscriminate disclosure of information.

  10. Virtual shelves in a digital library: a framework for access to networked information sources.

    Science.gov (United States)

    Patrick, T B; Springer, G K; Mitchell, J A; Sievert, M E

    1995-01-01

    Develop a framework for collections-based access to networked information sources that addresses the problem of location-dependent access to information sources. This framework uses a metaphor of a virtual shelf. A virtual shelf is a general-purpose server that is dedicated to a particular information subject class. The identifier of one of these servers identifies its subject class. Location-independent call numbers are assigned to information sources. Call numbers are based on standard vocabulary codes. The call numbers are first mapped to the location-independent identifiers of virtual shelves. When access to an information resource is required, a location directory provides a second mapping of these location-independent server identifiers to actual network locations. The framework has been implemented in two different systems. One system is based on the Open System Foundation/Distributed Computing Environment and the other is based on the World Wide Web. This framework applies in new ways traditional methods of library classification and cataloging. It is compatible with two traditional styles of selecting information searching and browsing. Traditional methods may be combined with new paradigms of information searching that will be able to take advantage of the special properties of digital information. Cooperation between the library-informational science community and the informatics community can provide a means for a continuing application of the knowledge and techniques of library science to the new problems of networked information sources.

  11. An Access Control Protocol for Wireless Sensor Network Using Double Trapdoor Chameleon Hash Function

    Directory of Open Access Journals (Sweden)

    Tejeshwari Thakur

    2016-01-01

    Full Text Available Wireless sensor network (WSN, a type of communication system, is normally deployed into the unattended environment where the intended user can get access to the network. The sensor nodes collect data from this environment. If the data are valuable and confidential, then security measures are needed to protect them from the unauthorized access. This situation requires an access control protocol (ACP in the design of sensor network because of sensor nodes which are vulnerable to various malicious attacks during the authentication and key establishment and the new node addition phase. In this paper, we propose a secured ACP for such WSN. This protocol is based on Elliptic Curve Discrete Log Problem (ECDLP and double trapdoor chameleon hash function which secures the WSN from malicious attacks such as node masquerading attack, replay attack, man-in-the-middle attack, and forgery attacks. Proposed ACP has a special feature known as session key security. Also, the proposed ACP is more efficient as it requires only one modular multiplication during the initialization phase.

  12. Delay-aware adaptive sleep mechanism for green wireless-optical broadband access networks

    Science.gov (United States)

    Wang, Ruyan; Liang, Alei; Wu, Dapeng; Wu, Dalei

    2017-07-01

    Wireless-Optical Broadband Access Network (WOBAN) is capacity-high, reliable, flexible, and ubiquitous, as it takes full advantage of the merits from both optical communication and wireless communication technologies. Similar to other access networks, the high energy consumption poses a great challenge for building up WOBANs. To shot this problem, we can make some load-light Optical Network Units (ONUs) sleep to reduce the energy consumption. Such operation, however, causes the increased packet delay. Jointly considering the energy consumption and transmission delay, we propose a delay-aware adaptive sleep mechanism. Specifically, we develop a new analytical method to evaluate the transmission delay and queuing delay over the optical part, instead of adopting M/M/1 queuing model. Meanwhile, we also analyze the access delay and queuing delay of the wireless part. Based on such developed delay models, we mathematically derive ONU's optimal sleep time. In addition, we provide numerous simulation results to show the effectiveness of the proposed mechanism.

  13. The accessibility of Poland’s Space to the Trans-European Transport Network

    Directory of Open Access Journals (Sweden)

    Wiśniewski Szymon

    2017-09-01

    Full Text Available The aim of the article is to analyse the land transport accessibility of two trans-European corridors within the boundaries of Poland. The adjustment of the course of transport routes to the distribution of the population and the country’s land development (including economic potential and logistic infrastructure was outlined using measurements of cumulative accessibility. The results were presented in both cartographic form (isochrone approach and tabular form (cumulative approach. Research was conducted adopting different forms of transport used for relocation (including foot traffic, car, rail and multimodal transport and both the current and target layout of the transport network. This made it possible to determine the changes that will effectively run the process of investment in transport infrastructure on Polish territory. This allowed the identification of the areas of Poland which are particularly conveniently located in relation to domestic connections (in terms of the international network and those for which the European transport network remains difficult to access.

  14. The shipper as the architect of contractual relations in access to natural gas networks

    International Nuclear Information System (INIS)

    Codognet, Marc-Kevin

    2005-01-01

    Transportation and contractual arrangements are in the kernel of the natural gas reform in Europe. Since third party can access to pipelines, those who wish to ship gas between two locations of a gas network have to arrange transportation services. Natural gas transportation is a set of contractual arrangements and has become a complex contracting process. This paper aims at analyzing the typical economic functions of shippers in third-party access regimes in the natural gas industry in a transaction costs approach. Shippers provide and combine intermediation functions in transportation services markets: information management, matching, bundling and transactions guarantees. In this context, the shipper has appeared as a particular market intermediary specialized in transportation arrangements in the new regime of third party access in the natural gas industry. (Author)

  15. COMPETITIVENESS, MARKETING ACCESS, AND NETWORK CAPABILITY AND ITS IMPACTS ON MARKETING PERFORMANCE

    Directory of Open Access Journals (Sweden)

    Teguh Iman Sayekti

    2016-12-01

    Full Text Available This study is to determine what factors influencingthe performance of SMEs. The population in this study is SMEs in the Central Java. Sample collection was conducted with a purposive sampling method. Criteriaused to take into accountis the SMEs that are already running at leastfortwo years. The sample in this study is intended as the representative of total population,67 (sixty seven. The data were processed and analyzed by computer program of SPSS 20 for Windows. Based on the results of regression analysis, it can be concluded that competitiveness has positive and significant impact on marketing performance marketing access has positive and significant impact on marketing performance. It means that the higher competitiveness and marketing access, the higher its performance. Competitiveness and marketing access have influence on SMEs’ performance through network capability.   

  16. Image transmission in multicore-fiber code-division multiple access network

    Science.gov (United States)

    Yang, Guu-Chang; Kwong, Wing C.

    1997-01-01

    Recently, two-dimensional (2-D) signature patterns were proposed to encode binary digitized image pixels in optical code-division multiple-access (CDMA) networks with 'multicore' fiber. The new technology enables parallel transmission and simultaneous access of 2-D images in multiple-access environment, where these signature patterns are defined as optical orthogonal signature pattern codes (OOSPCs). However, previous work on OOSPCs assumed that the weight of each signature pattern was the same. In this paper, we construct a new family of OOSPCs with the removal of this assumption. Since varying the weight of a user's signature pattern affects that user's performance, this approach is useful for CDMA optical systems with multiple performance requirements.

  17. Protein Solvent-Accessibility Prediction by a Stacked Deep Bidirectional Recurrent Neural Network

    Directory of Open Access Journals (Sweden)

    Buzhong Zhang

    2018-05-01

    Full Text Available Residue solvent accessibility is closely related to the spatial arrangement and packing of residues. Predicting the solvent accessibility of a protein is an important step to understand its structure and function. In this work, we present a deep learning method to predict residue solvent accessibility, which is based on a stacked deep bidirectional recurrent neural network applied to sequence profiles. To capture more long-range sequence information, a merging operator was proposed when bidirectional information from hidden nodes was merged for outputs. Three types of merging operators were used in our improved model, with a long short-term memory network performing as a hidden computing node. The trained database was constructed from 7361 proteins extracted from the PISCES server using a cut-off of 25% sequence identity. Sequence-derived features including position-specific scoring matrix, physical properties, physicochemical characteristics, conservation score and protein coding were used to represent a residue. Using this method, predictive values of continuous relative solvent-accessible area were obtained, and then, these values were transformed into binary states with predefined thresholds. Our experimental results showed that our deep learning method improved prediction quality relative to current methods, with mean absolute error and Pearson’s correlation coefficient values of 8.8% and 74.8%, respectively, on the CB502 dataset and 8.2% and 78%, respectively, on the Manesh215 dataset.

  18. Protein Solvent-Accessibility Prediction by a Stacked Deep Bidirectional Recurrent Neural Network.

    Science.gov (United States)

    Zhang, Buzhong; Li, Linqing; Lü, Qiang

    2018-05-25

    Residue solvent accessibility is closely related to the spatial arrangement and packing of residues. Predicting the solvent accessibility of a protein is an important step to understand its structure and function. In this work, we present a deep learning method to predict residue solvent accessibility, which is based on a stacked deep bidirectional recurrent neural network applied to sequence profiles. To capture more long-range sequence information, a merging operator was proposed when bidirectional information from hidden nodes was merged for outputs. Three types of merging operators were used in our improved model, with a long short-term memory network performing as a hidden computing node. The trained database was constructed from 7361 proteins extracted from the PISCES server using a cut-off of 25% sequence identity. Sequence-derived features including position-specific scoring matrix, physical properties, physicochemical characteristics, conservation score and protein coding were used to represent a residue. Using this method, predictive values of continuous relative solvent-accessible area were obtained, and then, these values were transformed into binary states with predefined thresholds. Our experimental results showed that our deep learning method improved prediction quality relative to current methods, with mean absolute error and Pearson's correlation coefficient values of 8.8% and 74.8%, respectively, on the CB502 dataset and 8.2% and 78%, respectively, on the Manesh215 dataset.

  19. FODA: a novel efficient multiple access protocol for highly dynamic self-organizing networks

    Science.gov (United States)

    Li, Hantao; Liu, Kai; Zhang, Jun

    2005-11-01

    Based on the concept of contention reservation for polling transmission and collision prevention strategy for collision resolution, a fair on-demand access (FODA) protocol for supporting node mobility and multihop architecture in highly dynamic self-organizing networks is proposed. In the protocol, a distributed clustering network architecture formed by self-organizing algorithm and a main idea of reserving channel resources to get polling service are adopted, so that the hidden terminal (HT) and exposed terminal (ET) problems existed in traffic transmission due to multihop architecture and wireless transmission can be eliminated completely. In addition, an improved collision prevention scheme based on binary countdown algorithm (BCA), called fair collision prevention (FCP) algorithm, is proposed to greatly eliminate unfair phenomena existed in contention access of newly active ordinary nodes and completely resolve access collisions. Finally, the performance comparison of the FODA protocol with carrier sense multiple access with collision avoidance (CSMA/CA) and polling protocols by OPNET simulation are presented. Simulation results show that the FODA protocol can overcome the disadvantages of CSMA/CA and polling protocols, and achieve higher throughput, lower average message delay and less average message dropping rate.

  20. Metro-access integrated network based on optical OFDMA with dynamic sub-carrier allocation and power distribution.

    Science.gov (United States)

    Zhang, Chongfu; Zhang, Qiongli; Chen, Chen; Jiang, Ning; Liu, Deming; Qiu, Kun; Liu, Shuang; Wu, Baojian

    2013-01-28

    We propose and demonstrate a novel optical orthogonal frequency-division multiple access (OFDMA)-based metro-access integrated network with dynamic resource allocation. It consists of a single fiber OFDMA ring and many single fiber OFDMA trees, which transparently integrates metropolitan area networks with optical access networks. The single fiber OFDMA ring connects the core network and the central nodes (CNs), the CNs are on demand reconfigurable and use multiple orthogonal sub-carriers to realize parallel data transmission and dynamic resource allocation, meanwhile, they can also implement flexible power distribution. The remote nodes (RNs) distributed in the user side are connected by the single fiber OFDMA trees with the corresponding CN. The obtained results indicate that our proposed metro-access integrated network is feasible and the power distribution is agile.

  1. Energy efficiency for cloud-radio access networks with imperfect channel state information

    KAUST Repository

    Al-Oquibi, Bayan

    2016-12-24

    The advent of smartphones and tablets over the past several years has resulted in a drastic increase of global carbon footprint, due to the explosive growth of data traffic. Improving energy efficiency (EE) becomes, therefore, a crucial design metric in next generation wireless systems (5G). Cloud radio access network (C-RAN), a promising 5G network architecture, provides an efficient framework for improving the EE performance, by means of coordinating the transmission across the network. This paper considers a C-RAN system formed by several clusters of remote radio heads (RRHs), each serving a predetermined set of mobile users (MUs), and assumes imperfect channel state information (CSI). The network performance becomes therefore a function of the intra-cluster and inter-cluster interference, as well as the channel estimation error. The paper optimizes the transmit power of each RRH in order to maximize the network global EE subject to MU service rate requirements and RRHs maximum power constraints. The paper proposes solving the optimization problem using a heuristic algorithm based on techniques from optimization theory via a two-stage iterative solution. Simulation results show that the proposed power allocation algorithm provides an appreciable performance improvement as compared to the conventional systems with maximum power transmission strategy. They further highlight the convergence of the proposed algorithm for different networks scenarios.

  2. The Effects of a Dynamic Spectrum Access Overlay in LTE-Advanced Networks

    Energy Technology Data Exchange (ETDEWEB)

    Juan D. Deaton; Ryan E. lrwin; Luiz A. DaSilva

    2011-05-01

    As early as 2014, wireless network operators spectral capacity will be overwhelmed by a data tsunami brought on by new devices and applications. To augment spectral capacity, operators could deploy a Dynamic Spectrum Access (DSA) overlay. In the light of the many planned Long Term Evolution (LTE) network deployments, the affects of a DSA overlay have not been fully considered into the existing LTE standards. Coalescing many different aspects of DSA, this paper develops the Spectrum Accountability (SA) framework. The SA framework defines specific network element functionality, protocol interfaces, and signaling flow diagrams for LTE to support service requests and enforce rights of responsibilities of primary and secondary users, respectively. We also include a network simulation to quantify the benefits of using DSA channels to augment capacity. Based on our simulation we show that, network operators can benefit up to %40 increase in operating capacity when sharing DSA bands to augment spectral capacity. With our framework, this paper could serve as an guide in developing future LTE network standards that include DSA.

  3. FttC-Based Fronthaul for 5G Dense/Ultra-Dense Access Network: Performance and Costs in Realistic Scenarios

    Directory of Open Access Journals (Sweden)

    Franco Mazzenga

    2017-10-01

    Full Text Available One distinctive feature of the next 5G systems is the presence of a dense/ultra-dense wireless access network with a large number of access points (or nodes at short distances from each other. Dense/ultra-dense access networks allow for providing very high transmission capacity to terminals. However, the deployment of dense/ultra-dense networks is slowed down by the cost of the fiber-based infrastructure required to connect radio nodes to the central processing units and then to the core network. In this paper, we investigate the possibility for existing FttC access networks to provide fronthaul capabilities for dense/ultra-dense 5G wireless networks. The analysis is realistic in that it is carried out considering an actual access network scenario, i.e., the Italian FttC deployment. It is assumed that access nodes are connected to the Cabinets and to the corresponding distributors by a number of copper pairs. Different types of cities grouped in terms of population have been considered. Results focus on fronthaul transport capacity provided by the FttC network and have been expressed in terms of the available fronthaul bit rate per node and of the achievable coverage.

  4. Distributed Robust Power Minimization for the Downlink of Multi-Cloud Radio Access Networks

    KAUST Repository

    Dhifallah, Oussama Najeeb

    2017-02-07

    Conventional cloud radio access networks assume single cloud processing and treat inter-cloud interference as background noise. This paper considers the downlink of a multi-cloud radio access network (CRAN) where each cloud is connected to several base-stations (BS) through limited-capacity wireline backhaul links. The set of BSs connected to each cloud, called cluster, serves a set of pre-known mobile users (MUs). The performance of the system becomes therefore a function of both inter-cloud and intra-cloud interference, as well as the compression schemes of the limited capacity backhaul links. The paper assumes independent compression scheme and imperfect channel state information (CSI) where the CSI errors belong to an ellipsoidal bounded region. The problem of interest becomes the one of minimizing the network total transmit power subject to BS power and quality of service constraints, as well as backhaul capacity and CSI error constraints. The paper suggests solving the problem using the alternating direction method of multipliers (ADMM). One of the highlight of the paper is that the proposed ADMM-based algorithm can be implemented in a distributed fashion across the multi-cloud network by allowing a limited amount of information exchange between the coupled clouds. Simulation results show that the proposed distributed algorithm provides a similar performance to the centralized algorithm in a reasonable number of iterations.

  5. Resource allocation in heterogeneous cloud radio access networks: advances and challenges

    KAUST Repository

    Dahrouj, Hayssam

    2015-06-01

    Base station densification is increasingly used by network operators to provide better throughput and coverage performance to mobile subscribers in dense data traffic areas. Such densification is progressively diffusing the move from traditional macrocell base stations toward heterogeneous networks with diverse cell sizes (e.g., microcell, picocell, femotcell) and diverse radio access technologies (e.g., GSM, CDMA), and LTE). The coexistence of the different network entities brings an additional set of challenges, particularly in terms of the provisioning of high-speed communications and the management of wireless interference. Resource sharing between different entities, largely incompatible in conventional systems due to the lack of interconnections, becomes a necessity. By connecting all the base stations from different tiers to a central processor (referred to as the cloud) through wire/wireline backhaul links, the heterogeneous cloud radio access network, H-CRAN, provides an open, simple, controllable, and flexible paradigm for resource allocation. This article discusses challenges and recent developments in H-CRAN design. It proposes promising resource allocation schemes in H-CRAN: coordinated scheduling, hybrid backhauling, and multicloud association. Simulations results show how the proposed strategies provide appreciable performance improvement compared to methods from recent literature. © 2015 IEEE.

  6. Optimal Caching in Multicast 5G Networks with Opportunistic Spectrum Access

    KAUST Repository

    Emara, Mostafa

    2018-01-15

    Cache-enabled small base station (SBS) densification is foreseen as a key component of 5G cellular networks. This architecture enables storing popular files at the network edge (i.e., SBS caches), which empowers local communication and alleviates traffic congestions at the core/backhaul network. This paper develops a mathematical framework, based on stochastic geometry, to characterize the hit probability of a cache-enabled multicast 5G network with SBS multi-channel capabilities and opportunistic spectrum access. To this end, we first derive the hit probability by characterizing opportunistic spectrum access success probabilities, service distance distributions, and coverage probabilities. The optimal caching distribution to maximize the hit probability is then computed. The performance and trade-offs of the derived optimal caching distributions are then assessed and compared with two widely employed caching distribution schemes, namely uniform and Zipf caching, through numerical results and extensive simulations. It is shown that the Zipf caching almost optimal only in scenarios with large number of available channels and large cache sizes.

  7. Support networks and people with physical disabilities: social inclusion and access to health services.

    Science.gov (United States)

    Holanda, Cristina Marques de Almeida; De Andrade, Fabienne Louise Juvêncio Paes; Bezerra, Maria Aparecida; Nascimento, João Paulo da Silva; Neves, Robson da Fonseca; Alves, Simone Bezerra; Ribeiro, Kátia Suely Queiroz Silva

    2015-01-01

    This study seeks to identify the formation of social support networks of people with physical disabilities, and how these networks can help facilitate access to health services and promote social inclusion. It is a cross-sectional study, with data collected via a form applied to physically disabled persons over eighteen years of age registered with the Family Health Teams of the municipal district of João Pessoa in the state of Paraíba. It was observed that the support networks of these individuals predominantly consist of family members (parents, siblings, children, spouses) and people outside the family (friends and neighbors). However, 50% of the interviewees declared that they could not count on any support from outside the family. It was observed that the support network contributes to access to the services and participation in social groups. However, reduced social inclusion was detected, due to locomotion difficulties, this being the main barrier to social interaction. Among those individuals who began to interact in society, the part played by social support was fundamental.

  8. Modeling Social Capital as Dynamic Networks to Promote Access to Oral Healthcare.

    Science.gov (United States)

    Wang, Hua; Northridge, Mary E; Kunzel, Carol; Zhang, Qiuyi; Kum, Susan S; Gilbert, Jessica L; Jin, Zhu; Metcalf, Sara S

    2016-01-01

    Social capital, as comprised of human connections in social networks and their associated benefits, is closely related to the health of individuals, communities, and societies at large. For disadvantaged population groups such as older adults and racial/ethnic minorities, social capital may play a particularly critical role in mitigating the negative effects and reinforcing the positive effects on health. In this project, we model social capital as both cause and effect by simulating dynamic networks. Informed in part by a community-based health promotion program, an agent-based model is contextualized in a GIS environment to explore the complexity of social disparities in oral and general health as experienced at the individual, interpersonal, and community scales. This study provides the foundation for future work investigating how health and healthcare accessibility may be influenced by social networks.

  9. Applying 4-regular grid structures in large-scale access networks

    DEFF Research Database (Denmark)

    Pedersen, Jens Myrup; Knudsen, Thomas P.; Patel, Ahmed

    2006-01-01

    4-Regular grid structures have been used in multiprocessor systems for decades due to a number of nice properties with regard to routing, protection, and restoration, together with a straightforward planar layout. These qualities are to an increasing extent demanded also in largescale access...... networks, but concerning protection and restoration these demands have been met only to a limited extent by the commonly used ring and tree structures. To deal with the fact that classical 4-regular grid structures are not directly applicable in such networks, this paper proposes a number of extensions...... concerning restoration, protection, scalability, embeddability, flexibility, and cost. The extensions are presented as a tool case, which can be used for implementing semi-automatic and in the longer term full automatic network planning tools....

  10. Statistics of the uplink co-tier interference in closed access heterogeneous networks

    KAUST Repository

    Tabassum, Hina

    2013-09-01

    In this paper, we derive a statistical model of the co-tier interference in closed access two tier heterogeneous wireless cellular networks with femtocell deployments. The derived model captures the impact of bounded path loss model, wall penetration loss, user distributions, random locations, and density of the femtocells. Firstly, we derive the analytical expressions for the probability density function (PDF) and moment generating function (MGF) of the co-tier interference considering a single femtocell interferer by exploiting the random disc line picking theory from geometric probability. We then derive the MGF of the cumulative interference from all femtocell interferers considering full spectral reuse in each femtocell. Orthogonal spectrum partitioning is assumed between the macrocell and femtocell networks to avoid any cross-tier interference. Finally, the accuracy of the derived expressions is validated through Monte-Carlo simulations and the expressions are shown to be useful in quantifying important network performance metrics such as ergodic capacity. © 2013 IEEE.

  11. A novel method of predicting microRNA-disease associations based on microRNA, disease, gene and environment factor networks.

    Science.gov (United States)

    Peng, Wei; Lan, Wei; Zhong, Jiancheng; Wang, Jianxin; Pan, Yi

    2017-07-15

    MicroRNAs have been reported to have close relationship with diseases due to their deregulation of the expression of target mRNAs. Detecting disease-related microRNAs is helpful for disease therapies. With the development of high throughput experimental techniques, a large number of microRNAs have been sequenced. However, it is still a big challenge to identify which microRNAs are related to diseases. Recently, researchers are interesting in combining multiple-biological information to identify the associations between microRNAs and diseases. In this work, we have proposed a novel method to predict the microRNA-disease associations based on four biological properties. They are microRNA, disease, gene and environment factor. Compared with previous methods, our method makes predictions not only by using the prior knowledge of associations among microRNAs, disease, environment factors and genes, but also by using the internal relationship among these biological properties. We constructed four biological networks based on the similarity of microRNAs, diseases, environment factors and genes, respectively. Then random walking was implemented on the four networks unequally. In the walking course, the associations can be inferred from the neighbors in the same networks. Meanwhile the association information can be transferred from one network to another. The results of experiment showed that our method achieved better prediction performance than other existing state-of-the-art methods. Copyright © 2017 Elsevier Inc. All rights reserved.

  12. Comprehensive analysis of coding-lncRNA gene co-expression network uncovers conserved functional lncRNAs in zebrafish.

    Science.gov (United States)

    Chen, Wen; Zhang, Xuan; Li, Jing; Huang, Shulan; Xiang, Shuanglin; Hu, Xiang; Liu, Changning

    2018-05-09

    Zebrafish is a full-developed model system for studying development processes and human disease. Recent studies of deep sequencing had discovered a large number of long non-coding RNAs (lncRNAs) in zebrafish. However, only few of them had been functionally characterized. Therefore, how to take advantage of the mature zebrafish system to deeply investigate the lncRNAs' function and conservation is really intriguing. We systematically collected and analyzed a series of zebrafish RNA-seq data, then combined them with resources from known database and literatures. As a result, we obtained by far the most complete dataset of zebrafish lncRNAs, containing 13,604 lncRNA genes (21,128 transcripts) in total. Based on that, a co-expression network upon zebrafish coding and lncRNA genes was constructed and analyzed, and used to predict the Gene Ontology (GO) and the KEGG annotation of lncRNA. Meanwhile, we made a conservation analysis on zebrafish lncRNA, identifying 1828 conserved zebrafish lncRNA genes (1890 transcripts) that have their putative mammalian orthologs. We also found that zebrafish lncRNAs play important roles in regulation of the development and function of nervous system; these conserved lncRNAs present a significant sequential and functional conservation, with their mammalian counterparts. By integrative data analysis and construction of coding-lncRNA gene co-expression network, we gained the most comprehensive dataset of zebrafish lncRNAs up to present, as well as their systematic annotations and comprehensive analyses on function and conservation. Our study provides a reliable zebrafish-based platform to deeply explore lncRNA function and mechanism, as well as the lncRNA commonality between zebrafish and human.

  13. MicroRNA-gene expression network in murine liver during Schistosoma japonicum infection.

    Directory of Open Access Journals (Sweden)

    Pengfei Cai

    Full Text Available BACKGROUND: Schistosomiasis japonica remains a significant public health problem in China and Southeast Asian countries. The most typical and serious outcome of the chronic oriental schistosomiasis is the progressive granuloma and fibrosis in the host liver, which has been a major medical challenge. However, the molecular mechanism underling the hepatic pathogenesis is still not clear. METHODOLOGY AND PRINCIPAL FINDINGS: Using microarrays, we quantified the temporal gene expression profiles in the liver of Schistosoma japonicum-infected BALB/c mice at 15, 30, and 45 day post infection (dpi with that from uninfected mice as controls. Gene expression alternation associated with liver damage was observed in the initial phase of infection (dpi 15, which became more magnificent with the onset of egg-laying. Up-regulated genes were dominantly associated with inflammatory infiltration, whereas down-regulated genes primarily led to the hepatic functional disorders. Simultaneously, microRNA profiles from the same samples were decoded by Solexa sequencing. More than 130 miRNAs were differentially expressed in murine liver during S. japonicum infection. MiRNAs significantly dysregulated in the mid-phase of infection (dpi 30, such as mmu-miR-146b and mmu-miR-155, may relate to the regulation of hepatic inflammatory responses, whereas miRNAs exhibiting a peak expression in the late phase of infection (dpi 45, such as mmu-miR-223, mmu-miR-146a/b, mmu-miR-155, mmu-miR-34c, mmu-miR-199, and mmu-miR-134, may represent a molecular signature of the development of schistosomal hepatopathy. Further, a dynamic miRNA-gene co-expression network in the progression of infection was constructed. CONCLUSIONS AND SIGNIFICANCE: This study presents a global view of dynamic expression of both mRNA and miRNA transcripts in murine liver during S. japonicum infection, and highlights that miRNAs may play a variety of regulatory roles in balancing the immune responses during the

  14. A sparse autoencoder-based deep neural network for protein solvent accessibility and contact number prediction.

    Science.gov (United States)

    Deng, Lei; Fan, Chao; Zeng, Zhiwen

    2017-12-28

    Direct prediction of the three-dimensional (3D) structures of proteins from one-dimensional (1D) sequences is a challenging problem. Significant structural characteristics such as solvent accessibility and contact number are essential for deriving restrains in modeling protein folding and protein 3D structure. Thus, accurately predicting these features is a critical step for 3D protein structure building. In this study, we present DeepSacon, a computational method that can effectively predict protein solvent accessibility and contact number by using a deep neural network, which is built based on stacked autoencoder and a dropout method. The results demonstrate that our proposed DeepSacon achieves a significant improvement in the prediction quality compared with the state-of-the-art methods. We obtain 0.70 three-state accuracy for solvent accessibility, 0.33 15-state accuracy and 0.74 Pearson Correlation Coefficient (PCC) for the contact number on the 5729 monomeric soluble globular protein dataset. We also evaluate the performance on the CASP11 benchmark dataset, DeepSacon achieves 0.68 three-state accuracy and 0.69 PCC for solvent accessibility and contact number, respectively. We have shown that DeepSacon can reliably predict solvent accessibility and contact number with stacked sparse autoencoder and a dropout approach.

  15. Adaptation of AMO-FBMC-OQAM in optical access network for accommodating asynchronous multiple access in OFDM-based uplink transmission

    Science.gov (United States)

    Jung, Sun-Young; Jung, Sang-Min; Han, Sang-Kook

    2015-01-01

    Exponentially expanding various applications in company with proliferation of mobile devices make mobile traffic exploded annually. For future access network, bandwidth efficient and asynchronous signals converged transmission technique is required in optical network to meet a huge bandwidth demand, while integrating various services and satisfying multiple access in perceived network resource. Orthogonal frequency division multiplexing (OFDM) is highly bandwidth efficient parallel transmission technique based on orthogonal subcarriers. OFDM has been widely studied in wired-/wireless communication and became a Long term evolution (LTE) standard. Consequently, OFDM also has been actively researched in optical network. However, OFDM is vulnerable frequency and phase offset essentially because of its sinc-shaped side lobes, therefore tight synchronism is necessary to maintain orthogonality. Moreover, redundant cyclic prefix (CP) is required in dispersive channel. Additionally, side lobes act as interference among users in multiple access. Thus, it practically hinders from supporting integration of various services and multiple access based on OFDM optical transmission In this paper, adaptively modulated optical filter bank multicarrier system with offset QAM (AMO-FBMC-OQAM) is introduced and experimentally investigated in uplink optical transmission to relax multiple access interference (MAI), while improving bandwidth efficiency. Side lobes are effectively suppressed by using FBMC, therefore the system becomes robust to path difference and imbalance among optical network units (ONUs), which increase bandwidth efficiency by reducing redundancy. In comparison with OFDM, a signal performance and an efficiency of frequency utilization are improved in the same experimental condition. It enables optical network to effectively support heterogeneous services and multiple access.

  16. Oceans 2.0 API: Programmatic access to Ocean Networks Canada's sensor data.

    Science.gov (United States)

    Heesemann, M.; Ross, R.; Hoeberechts, M.; Pirenne, B.; MacArthur, M.; Jeffries, M. A.; Morley, M. G.

    2017-12-01

    Ocean Networks Canada (ONC) is a not-for-profit society that operates and manages innovative cabled observatories on behalf of the University of Victoria. These observatories supply continuous power and Internet connectivity to various scientific instruments located in coastal, deep-ocean and Arctic environments. The data from the instruments are relayed to the University of Victoria where they are archived, quality-controlled and made freely available to researchers, educators, and the public. The Oceans 2.0 data management system currently contains over 500 terabytes of data collected over 11 years from thousands of sensors. In order to facilitate access to the data, particularly for large datasets and long-time series of high-resolution data, a project was started in 2016 create a comprehensive Application Programming Interface, the "Oceans 2.0 API," to provide programmatic access to all ONC data products. The development is part of a project entitled "A Research Platform for User-Defined Oceanographic Data Products," funded through CANARIE, a Canadian organization responsible for the design and delivery of digital infrastructure for research, education and innovation [1]. Providing quick and easy access to ONC Data Products from within custom software solutions, allows researchers, modelers and decision makers to focus on what is important: solving their problems, answering their questions and making informed decisions. In this paper, we discuss how to access ONC's vast archive of data programmatically, through the Oceans 2.0 API. In particular we discuss the following: Access to ONC Data Products Access to ONC sensor data in near real-time Programming language support Use Cases References [1] CANARIE. Internet: https://www.canarie.ca/; accessed March 6, 2017.

  17. Revisiting of Channel Access Mechanisms in Mobile Wireless Networks through Exploiting Physical Layer Technologies

    Directory of Open Access Journals (Sweden)

    Junmei Yao

    2018-01-01

    Full Text Available The wireless local area networks (WLANs have been widely deployed with the rapid development of mobile devices and have further been brought into new applications with infrastructure mobility due to the growth of unmanned aerial vehicles (UAVs. However, the WLANs still face persistent challenge on increasing the network throughput to meet the customer’s requirement and fight against the node mobility. Interference is a well-known issue that would degrade the network performance due to the broadcast characteristics of the wireless signals. Moreover, with infrastructure mobility, the interference becomes the key obstacle in pursuing the channel capacity. Legacy interference management mechanism through the channel access control in the MAC layer design of the 802.11 standard has some well-known drawbacks, such as exposed and hidden terminal problems, inefficient rate adaptation, and retransmission schemes, making the efficient interference management an everlasting research topic over the years. Recently, interference management through exploiting physical layer mechanisms has attracted much research interest and has been proven to be a promising way to improve the network throughput, especially under the infrastructure mobility scenarios which provides more indicators for node dynamics. In this paper, we introduce a series of representative physical layer techniques and analyze how they are exploited for interference management to improve the network performance. We also provide some discussions about the research challenges and give potential future research topics in this area.

  18. Stochastic geometry model for multi-channel fog radio access networks

    KAUST Repository

    Emara, Mostafa

    2017-06-29

    Cache-enabled base station (BS) densification, denoted as a fog radio access network (F-RAN), is foreseen as a key component of 5G cellular networks. F-RAN enables storing popular files at the network edge (i.e., BS caches), which empowers local communication and alleviates traffic congestions at the core/backhaul network. The hitting probability, which is the probability of successfully transmitting popular files request from the network edge, is a fundamental key performance indicator (KPI) for F-RAN. This paper develops a scheduling aware mathematical framework, based on stochastic geometry, to characterize the hitting probability of F-RAN in a multi-channel environment. To this end, we assess and compare the performance of two caching distribution schemes, namely, uniform caching and Zipf caching. The numerical results show that the commonly used single channel environment leads to pessimistic assessment for the hitting probability of F-RAN. Furthermore, the numerical results manifest the superiority of the Zipf caching scheme and quantify the hitting probability gains in terms of the number of channels and cache size.

  19. Decentralized Group Sparse Beamforming for Multi-Cloud Radio Access Networks

    KAUST Repository

    Dhifallah, Oussama Najeeb

    2015-12-06

    Recent studies on cloud-radio access networks (CRANs) assume the availability of a single processor (cloud) capable of managing the entire network performance; inter-cloud interference is treated as background noise. This paper considers the more practical scenario of the downlink of a CRAN formed by multiple clouds, where each cloud is connected to a cluster of multiple-antenna base stations (BSs) via high-capacity wireline backhaul links. The network is composed of several disjoint BSs\\' clusters, each serving a pre-known set of single-antenna users. To account for both inter- cloud and intra-cloud interference, the paper considers the problem of minimizing the total network power consumption subject to quality of service constraints, by jointly determining the set of active BSs connected to each cloud and the beamforming vectors of every user across the network. The paper solves the problem using Lagrangian duality theory through a dual decomposition approach, which decouples the problem into multiple and independent subproblems, the solution of which depends on the dual optimization problem. The solution then proceeds in updating the dual variables and the active set of BSs at each cloud iteratively. The proposed approach leads to a distributed implementation across the multiple clouds through a reasonable exchange of information between adjacent clouds. The paper further proposes a centralized solution to the problem. Simulation results suggest that the proposed algorithms significantly outperform the conventional per-cloud update solution, especially at high signal-to-interference-plus- noise ratio (SINR) target.

  20. A Time-constrained Network Voronoi Construction and Accessibility Analysis in Location-based Service Technology

    Science.gov (United States)

    Yu, W.; Ai, T.

    2014-11-01

    Accessibility analysis usually requires special models of spatial location analysis based on some geometric constructions, such as Voronoi diagram (abbreviated to VD). There are many achievements in classic Voronoi model research, however suffering from the following limitations for location-based services (LBS) applications. (1) It is difficult to objectively reflect the actual service areas of facilities by using traditional planar VDs, because human activities in LBS are usually constrained only to the network portion of the planar space. (2) Although some researchers have adopted network distance to construct VDs, their approaches are used in a static environment, where unrealistic measures of shortest path distance based on assumptions about constant travel speeds through the network were often used. (3) Due to the computational complexity of the shortest-path distance calculating, previous researches tend to be very time consuming, especially for large datasets and if multiple runs are required. To solve the above problems, a novel algorithm is developed in this paper. We apply network-based quadrat system and 1-D sequential expansion to find the corresponding subnetwork for each focus. The idea is inspired by the natural phenomenon that water flow extends along certain linear channels until meets others or arrives at the end of route. In order to accommodate the changes in traffic conditions, the length of network-quadrat is set upon the traffic condition of the corresponding street. The method has the advantage over Dijkstra's algorithm in that the time cost is avoided, and replaced with a linear time operation.

  1. Optimal Design of Multitype Groundwater Monitoring Networks Using Easily Accessible Tools.

    Science.gov (United States)

    Wöhling, Thomas; Geiges, Andreas; Nowak, Wolfgang

    2016-11-01

    Monitoring networks are expensive to establish and to maintain. In this paper, we extend an existing data-worth estimation method from the suite of PEST utilities with a global optimization method for optimal sensor placement (called optimal design) in groundwater monitoring networks. Design optimization can include multiple simultaneous sensor locations and multiple sensor types. Both location and sensor type are treated simultaneously as decision variables. Our method combines linear uncertainty quantification and a modified genetic algorithm for discrete multilocation, multitype search. The efficiency of the global optimization is enhanced by an archive of past samples and parallel computing. We demonstrate our methodology for a groundwater monitoring network at the Steinlach experimental site, south-western Germany, which has been established to monitor river-groundwater exchange processes. The target of optimization is the best possible exploration for minimum variance in predicting the mean travel time of the hyporheic exchange. Our results demonstrate that the information gain of monitoring network designs can be explored efficiently and with easily accessible tools prior to taking new field measurements or installing additional measurement points. The proposed methods proved to be efficient and can be applied for model-based optimal design of any type of monitoring network in approximately linear systems. Our key contributions are (1) the use of easy-to-implement tools for an otherwise complex task and (2) yet to consider data-worth interdependencies in simultaneous optimization of multiple sensor locations and sensor types. © 2016, National Ground Water Association.

  2. Access Selection Algorithm of Heterogeneous Wireless Networks for Smart Distribution Grid Based on Entropy-Weight and Rough Set

    Science.gov (United States)

    Xiang, Min; Qu, Qinqin; Chen, Cheng; Tian, Li; Zeng, Lingkang

    2017-11-01

    To improve the reliability of communication service in smart distribution grid (SDG), an access selection algorithm based on dynamic network status and different service types for heterogeneous wireless networks was proposed. The network performance index values were obtained in real time by multimode terminal and the variation trend of index values was analyzed by the growth matrix. The index weights were calculated by entropy-weight and then modified by rough set to get the final weights. Combining the grey relational analysis to sort the candidate networks, and the optimum communication network is selected. Simulation results show that the proposed algorithm can implement dynamically access selection in heterogeneous wireless networks of SDG effectively and reduce the network blocking probability.

  3. An Effective Massive Sensor Network Data Access Scheme Based on Topology Control for the Internet of Things.

    Science.gov (United States)

    Yi, Meng; Chen, Qingkui; Xiong, Neal N

    2016-11-03

    This paper considers the distributed access and control problem of massive wireless sensor networks' data access center for the Internet of Things, which is an extension of wireless sensor networks and an element of its topology structure. In the context of the arrival of massive service access requests at a virtual data center, this paper designs a massive sensing data access and control mechanism to improve the access efficiency of service requests and makes full use of the available resources at the data access center for the Internet of things. Firstly, this paper proposes a synergistically distributed buffer access model, which separates the information of resource and location. Secondly, the paper divides the service access requests into multiple virtual groups based on their characteristics and locations using an optimized self-organizing feature map neural network. Furthermore, this paper designs an optimal scheduling algorithm of group migration based on the combination scheme between the artificial bee colony algorithm and chaos searching theory. Finally, the experimental results demonstrate that this mechanism outperforms the existing schemes in terms of enhancing the accessibility of service requests effectively, reducing network delay, and has higher load balancing capacity and higher resource utility rate.

  4. Medium Access Control Protocols for Cognitive Radio Ad Hoc Networks: A Survey

    Directory of Open Access Journals (Sweden)

    Mahdi Zareei

    2017-09-01

    Full Text Available New wireless network paradigms will demand higher spectrum use and availability to cope with emerging data-hungry devices. Traditional static spectrum allocation policies cause spectrum scarcity, and new paradigms such as Cognitive Radio (CR and new protocols and techniques need to be developed in order to have efficient spectrum usage. Medium Access Control (MAC protocols are accountable for recognizing free spectrum, scheduling available resources and coordinating the coexistence of heterogeneous systems and users. This paper provides an ample review of the state-of-the-art MAC protocols, which mainly focuses on Cognitive Radio Ad Hoc Networks (CRAHN. First, a description of the cognitive radio fundamental functions is presented. Next, MAC protocols are divided into three groups, which are based on their channel access mechanism, namely time-slotted protocol, random access protocol and hybrid protocol. In each group, a detailed and comprehensive explanation of the latest MAC protocols is presented, as well as the pros and cons of each protocol. A discussion on future challenges for CRAHN MAC protocols is included with a comparison of the protocols from a functional perspective.

  5. Wide area network access to CMS data using the LustreTM filesystem

    Science.gov (United States)

    Rodriguez, J. L.; Avery, P.; Brody, T.; Bourilkov, D.; Fu, Y.; Kim, B.; Prescott, C.; Wu, Y.

    2010-04-01

    In this paper, we explore the use of the LustreTM cluster filesystem over the wide area network to access Compact Muon Solenoid (CMS) data stored on physical devices located hundreds of kilometres away. We describe the experimental testbed and report on the I/O performance of applications writing and reading data on the distributed LustreTM filesystem established across the WAN. We compare the I/O performance of a CMS application to the performance obtained with IOzone, a standard benchmark tool. We then examine the I/O performance of the CMS application running multiple processes on a single server. And compare the Lustre results to results obtained on data stored on local filesystems. Our measurements reveal that the IOzone benchmark tool, accessing data sequentially, can saturate the Gbps network link that connects our Lustre client in Miami Florida to the Lustre storage located in Gainesville, Florida. We also find that the I/O rates of the CMS application is significantly less than what can be obtained with IOzone for sequential access to data.

  6. Wide area network access to CMS data using the LustreTM filesystem

    International Nuclear Information System (INIS)

    Rodriguez, J L; Brody, T; Avery, P; Bourilkov, D; Fu, Y; Kim, B; Wu, Y; Prescott, C

    2010-01-01

    In this paper, we explore the use of the Lustre TM cluster filesystem over the wide area network to access Compact Muon Solenoid (CMS) data stored on physical devices located hundreds of kilometres away. We describe the experimental testbed and report on the I/O performance of applications writing and reading data on the distributed Lustre TM filesystem established across the WAN. We compare the I/O performance of a CMS application to the performance obtained with IOzone, a standard benchmark tool. We then examine the I/O performance of the CMS application running multiple processes on a single server. And compare the Lustre results to results obtained on data stored on local filesystems. Our measurements reveal that the IOzone benchmark tool, accessing data sequentially, can saturate the Gbps network link that connects our Lustre client in Miami Florida to the Lustre storage located in Gainesville, Florida. We also find that the I/O rates of the CMS application is significantly less than what can be obtained with IOzone for sequential access to data.

  7. An Optimal Medium Access Control with Partial Observations for Sensor Networks

    Directory of Open Access Journals (Sweden)

    Servetto Sergio D

    2005-01-01

    Full Text Available We consider medium access control (MAC in multihop sensor networks, where only partial information about the shared medium is available to the transmitter. We model our setting as a queuing problem in which the service rate of a queue is a function of a partially observed Markov chain representing the available bandwidth, and in which the arrivals are controlled based on the partial observations so as to keep the system in a desirable mildly unstable regime. The optimal controller for this problem satisfies a separation property: we first compute a probability measure on the state space of the chain, namely the information state, then use this measure as the new state on which the control decisions are based. We give a formal description of the system considered and of its dynamics, we formalize and solve an optimal control problem, and we show numerical simulations to illustrate with concrete examples properties of the optimal control law. We show how the ergodic behavior of our queuing model is characterized by an invariant measure over all possible information states, and we construct that measure. Our results can be specifically applied for designing efficient and stable algorithms for medium access control in multiple-accessed systems, in particular for sensor networks.

  8. QoS Modeling for End-to-End Performance Evaluation over Networks with Wireless Access

    Directory of Open Access Journals (Sweden)

    Gómez Gerardo

    2010-01-01

    Full Text Available This paper presents an end-to-end Quality of Service (QoS model for assessing the performance of data services over networks with wireless access. The proposed model deals with performance degradation across protocol layers using a bottom-up strategy, starting with the physical layer and moving on up to the application layer. This approach makes it possible to analytically assess performance at different layers, thereby facilitating a possible end-to-end optimization process. As a representative case, a scenario where a set of mobile terminals connected to a streaming server through an IP access node has been studied. UDP, TCP, and the new TCP-Friendly Rate Control (TFRC protocols were analyzed at the transport layer. The radio interface consisted of a variable-rate multiuser and multichannel subsystem, including retransmissions and adaptive modulation and coding. The proposed analytical QoS model was validated on a real-time emulator of an end-to-end network with wireless access and proved to be very useful for the purposes of service performance estimation and optimization.

  9. Linear programming model to construct phylogenetic network for 16S rRNA sequences of photosynthetic organisms and influenza viruses.

    Science.gov (United States)

    Mathur, Rinku; Adlakha, Neeru

    2014-06-01

    Phylogenetic trees give the information about the vertical relationships of ancestors and descendants but phylogenetic networks are used to visualize the horizontal relationships among the different organisms. In order to predict reticulate events there is a need to construct phylogenetic networks. Here, a Linear Programming (LP) model has been developed for the construction of phylogenetic network. The model is validated by using data sets of chloroplast of 16S rRNA sequences of photosynthetic organisms and Influenza A/H5N1 viruses. Results obtained are in agreement with those obtained by earlier researchers.

  10. Impact of Users Identities and Access Conditions on Downlink Performance in Closed Small-Cell Networks

    KAUST Repository

    Radaydeh, Redha

    2015-05-26

    This paper investigates the effect of various operation parameters on the downlink user performance in overlaid small-cell networks. The case study considers closed-access small cells (e.g., femtocells), wherein only active authorized user equipments (UEs) can be served, and each of which is allocated single downlink channel at a time. On the other hand, the macrocell base station can unconditionally serve macrocell UEs that exist inside its coverage space. The available channels can be shared simultaneously in the macrocell network and the femtocell network. Moreover, a channel can be reused only at the macrocell base station. The analysis provides quantitative approaches to model UEs identities, their likelihoods of being active, and their likelihoods of producing interference, considering UEs classifications, locations, and access capabilities. Moreover, it develops models for various interference sources observed from effective interference femtocells, considering femtocells capacities and operation conditions. The associated formulations to describe a desired UE performance and the impact of the number of available channels as well as the adopted channel assignment approach are thoroughly investigated. The results are generally presented for any channel models of interference sources as well as the desired source of the served UE. Moreover, specific channel models are then adopted, for which generalized closedform analytical results for the desired UE outage probability performance are obtained. Numerical and simulation results are presented to further clarify the main outcomes of the developed analysis.

  11. Enabling Broadband as Commodity within Access Networks: A QoS Recipe

    Science.gov (United States)

    Areizaga, Enrique; Foglar, Andreas; Elizondo, Antonio J.; Geilhardt, Frank

    This paper describes the QoS features that will transform the access networks landscape in order to bring “Broadband” as a commodity while setting up the pillars of the “Future Media Internet”. Quality of Experience is obviously key for emerging and future services. Broadcasting services will first need to equal the QoE of their counterparts in the Open-air market (for IP-TV examples would be artifact-free, no picture freezing, fast zapping times) and offer new features often using interactivity (Time-shifted TV, access to more content, 3DTV with feeling of presence). The huge variety of communications alternatives will lead to different requirements per customer, whose needs will also be dependent on parameters like where the connection is made, the time of the day/day of the week/period of the year or even his/her mood. Today’s networks, designed for providing just Broadband connectivity, will not be enough to satisfy customer’s needs and will necessarily support the introduction of new and innovative services. The Networks of the future should learn from the way the users are communicating, what services they are using, where, when, and how, and adapt accordingly.

  12. Hybrid Access Femtocells in Overlaid MIMO Cellular Networks with Transmit Selection under Poisson Field Interference

    KAUST Repository

    Abdel Nabi, Amr A

    2017-09-21

    This paper analyzes the performance of hybrid control-access schemes for small cells (such as femtocells) in the context of two-tier overlaid cellular networks. The proposed hybrid access schemes allow for sharing the same downlink resources between the small-cell network and the original macrocell network, and their mode of operations are characterized considering post-processed signal-to-interference-plus-noise ratios (SINRs) or pre-processed interference-aware operation. The work presents a detailed treatment of achieved performance of a desired user that benefits from MIMO arrays configuration through the use of transmit antenna selection (TAS) and maximal ratio combining (MRC) in the presence of Poisson field interference processes on spatial links. Furthermore, based on the interference awareness at the desired user, two TAS approaches are treated, which are the signal-to-noise (SNR)-based selection and SINR-based selection. The analysis is generalized to address the cases of highly-correlated and un-correlated aggregated interference on different transmit channels. In addition, the effect of delayed TAS due to imperfect feedback and the impact of arbitrary TAS processing are investigated. The analytical results are validated by simulations, to clarify some of the main outcomes herein.

  13. Hybrid Access Femtocells in Overlaid MIMO Cellular Networks with Transmit Selection under Poisson Field Interference

    KAUST Repository

    Abdel Nabi, Amr A; Al-Qahtani, Fawaz S.; Radaydeh, Redha Mahmoud Mesleh; Shaqfeh, Mohammed

    2017-01-01

    This paper analyzes the performance of hybrid control-access schemes for small cells (such as femtocells) in the context of two-tier overlaid cellular networks. The proposed hybrid access schemes allow for sharing the same downlink resources between the small-cell network and the original macrocell network, and their mode of operations are characterized considering post-processed signal-to-interference-plus-noise ratios (SINRs) or pre-processed interference-aware operation. The work presents a detailed treatment of achieved performance of a desired user that benefits from MIMO arrays configuration through the use of transmit antenna selection (TAS) and maximal ratio combining (MRC) in the presence of Poisson field interference processes on spatial links. Furthermore, based on the interference awareness at the desired user, two TAS approaches are treated, which are the signal-to-noise (SNR)-based selection and SINR-based selection. The analysis is generalized to address the cases of highly-correlated and un-correlated aggregated interference on different transmit channels. In addition, the effect of delayed TAS due to imperfect feedback and the impact of arbitrary TAS processing are investigated. The analytical results are validated by simulations, to clarify some of the main outcomes herein.

  14. Performance Evaluation of TDMA Medium Access Control Protocol in Cognitive Wireless Networks

    Directory of Open Access Journals (Sweden)

    Muhammed Enes Bayrakdar

    2017-02-01

    Full Text Available Cognitive radio paradigm has been revealed as a new communication technology that shares channels in wireless networks. Channel assignment is a crucial issue in the field of cognitive wireless networks because of the spectrum scarcity. In this work, we have evaluated the performance of TDMA medium access control protocol. In our simulation scenarios, primary users and secondary users utilize TDMA as a medium access control protocol. We have designed a network environment in Riverbed simulation software that consists of primary users, secondary users, and base stations. In our system model, secondary users sense the spectrum and inform the base station about empty channels. Then, the base station decides accordingly which secondary user may utilize the empty channel. Energy detection technique is employed as a spectrum sensing technique because it is the best when information about signal of primary user is acquired. Besides, different number of users is selected in simulation scenarios in order to obtain accurate delay and throughput results. Comparing analytical model with simulation results, we have shown that performance analysis of our system model is consistent and accurate.

  15. A 10 Gb/s passive-components-based WDM-TDM reconfigurable optical access network architecture

    NARCIS (Netherlands)

    Tran, N.C.; Jung, H.D.; Okonkwo, C.M.; Tangdiongga, E.; Koonen, A.M.J.

    2011-01-01

    We propose a cost-effective, reconfigurable optical access network by employing passive components in the remote node and dual conventional optical transceivers in ONUs. The architecture is demonstrated with bidirectional transmission at 10 Gb/s.

  16. Access to In-Network Emergency Physicians and Emergency Departments Within Federally Qualified Health Plans in 2015

    Directory of Open Access Journals (Sweden)

    Stephen C. Dorner, MSc

    2016-01-01

    Full Text Available Introduction: Under regulations established by the Affordable Care Act, insurance plans must meet minimum standards in order to be sold through the federal Marketplace. These standards to become a qualified health plan (QHP include maintaining a provider network sufficient to assure access to services. However, the complexity of emergency physician (EP employment practices – in which the EPs frequently serve as independent contractors of emergency departments, independently establish insurance contracts, etc... – and regulations governing insurance repayment may hinder the application of network adequacy standards to emergency medicine. As such, we hypothesized the existence of QHPs without in-network access to EPs. The objective is to identify whether there are QHPs without in-network access to EPs using information available through the federal Marketplace and publicly available provider directories. Results: In a national sample of Marketplace plans, we found that one in five provider networks lacks identifiable in-network EPs. QHPs lacking EPs spanned nearly half (44% of the 34 states using the federal Marketplace. Conclusion: Our data suggest that the present regulatory framework governing network adequacy is not generalizable to emergency care, representing a missed opportunity to protect patient access to in-network physicians. These findings and the current regulations governing insurance payment to EPs dis-incentivize the creation of adequate physician networks, incentivize the practice of balance billing, and shift the cost burden to patients.

  17. Studying the evolutionary relationships and phylogenetic trees of 21 groups of tRNA sequences based on complex networks.

    Science.gov (United States)

    Wei, Fangping; Chen, Bowen

    2012-03-01

    To find out the evolutionary relationships among different tRNA sequences of 21 amino acids, 22 networks are constructed. One is constructed from whole tRNAs, and the other 21 networks are constructed from the tRNAs which carry the same amino acids. A new method is proposed such that the alignment scores of any two amino acids groups are determined by the average degree and the average clustering coefficient of their networks. The anticodon feature of isolated tRNA and the phylogenetic trees of 21 group networks are discussed. We find that some isolated tRNA sequences in 21 networks still connect with other tRNAs outside their group, which reflects the fact that those tRNAs might evolve by intercrossing among these 21 groups. We also find that most anticodons among the same cluster are only one base different in the same sites when S ≥ 70, and they stay in the same rank in the ladder of evolutionary relationships. Those observations seem to agree on that some tRNAs might mutate from the same ancestor sequences based on point mutation mechanisms.

  18. A Novel Approach for Transmission of 56 Gbit/s NRZ Signal in Access Network Using Spectrum Slicing Technique

    DEFF Research Database (Denmark)

    Spolitis, S.; Vegas Olmos, Juan José; Bobrovs, V.

    2013-01-01

    We present the spectrum slicing and stitching concept for high-capacity low optics complexity optical access networks. Spectrum slicing and stitching of a 56 Gbit/s NRZ electrical signal is experimentally demonstrated for the first time.......We present the spectrum slicing and stitching concept for high-capacity low optics complexity optical access networks. Spectrum slicing and stitching of a 56 Gbit/s NRZ electrical signal is experimentally demonstrated for the first time....

  19. Chromatin accessibility prediction via convolutional long short-term memory networks with k-mer embedding.

    Science.gov (United States)

    Min, Xu; Zeng, Wanwen; Chen, Ning; Chen, Ting; Jiang, Rui

    2017-07-15

    Experimental techniques for measuring chromatin accessibility are expensive and time consuming, appealing for the development of computational approaches to predict open chromatin regions from DNA sequences. Along this direction, existing methods fall into two classes: one based on handcrafted k -mer features and the other based on convolutional neural networks. Although both categories have shown good performance in specific applications thus far, there still lacks a comprehensive framework to integrate useful k -mer co-occurrence information with recent advances in deep learning. We fill this gap by addressing the problem of chromatin accessibility prediction with a convolutional Long Short-Term Memory (LSTM) network with k -mer embedding. We first split DNA sequences into k -mers and pre-train k -mer embedding vectors based on the co-occurrence matrix of k -mers by using an unsupervised representation learning approach. We then construct a supervised deep learning architecture comprised of an embedding layer, three convolutional layers and a Bidirectional LSTM (BLSTM) layer for feature learning and classification. We demonstrate that our method gains high-quality fixed-length features from variable-length sequences and consistently outperforms baseline methods. We show that k -mer embedding can effectively enhance model performance by exploring different embedding strategies. We also prove the efficacy of both the convolution and the BLSTM layers by comparing two variations of the network architecture. We confirm the robustness of our model to hyper-parameters by performing sensitivity analysis. We hope our method can eventually reinforce our understanding of employing deep learning in genomic studies and shed light on research regarding mechanisms of chromatin accessibility. The source code can be downloaded from https://github.com/minxueric/ismb2017_lstm . tingchen@tsinghua.edu.cn or ruijiang@tsinghua.edu.cn. Supplementary materials are available at

  20. A distributed Synchronous reservation multiple access control protocol for mobile Ad hoc networks

    Institute of Scientific and Technical Information of China (English)

    ZHANG Yanling; SUN Xianpu; LI Jiandong

    2007-01-01

    This study proposes a new multiple access control protocol named distributed synchronous reservation multiple access control protocol.in which the hidden and exposed terminal problems are solved,and the quality of service(QoS)requirements for real-time traffic are guaranteed.The protocol is founded on time division multiplex address and a different type of traffic is assigned to difierent priority,according to which a node should compete for and reserve the free slots in a different method.Moreover,there is a reservation acknowledgement process before data transmit in each reserved slot,so that the intruded terminal problem is solved.The throughput and average packets drop probability of this protocol are analyzed and simulated in a fully connected network.the results of which indicate that this protocol is efficient enough to support the real-time traffic.and it is more suitable to MANETs.

  1. Secure wide area network access to CMS analysis data using the Lustre filesystem

    International Nuclear Information System (INIS)

    Bourilkov, D; Avery, P; Cheng, M; Fu, Y; Kim, B; Palencia, J; Budden, R; Benninger, K; Rodriquez, J L; Dilascio, J; Dykstra, D; Seenu, N

    2012-01-01

    This paper reports the design and implementation of a secure, wide area network (WAN), distributed filesystem by the ExTENCI project (Extending Science Through Enhanced National CyberInfrastructure), based on the Lustre filesystem. The system is used for remote access to analysis data from the Compact Muon Solenoid (CMS) experiment at the Large Hadron Collider (LHC), and from the Lattice Quantum ChromoDynamics (LQCD) project. Security is provided by Kerberos authentication and authorization with additional fine grained control based on Lustre ACLs (Access Control List) and quotas. We investigate the impact of using various Kerberos security flavors on the I/O rates of CMS applications on client nodes reading and writing data to the Lustre filesystem, and on LQCD benchmarks. The clients can be real or virtual nodes. We are investigating additional options for user authentication based on user certificates.

  2. Secure wide area network access to CMS analysis data using the Lustre filesystem

    Science.gov (United States)

    Bourilkov, D.; Avery, P.; Cheng, M.; Fu, Y.; Kim, B.; Palencia, J.; Budden, R.; Benninger, K.; Rodriquez, J. L.; Dilascio, J.; Dykstra, D.; Seenu, N.

    2012-12-01

    This paper reports the design and implementation of a secure, wide area network (WAN), distributed filesystem by the ExTENCI project (Extending Science Through Enhanced National CyberInfrastructure), based on the Lustre filesystem. The system is used for remote access to analysis data from the Compact Muon Solenoid (CMS) experiment at the Large Hadron Collider (LHC), and from the Lattice Quantum ChromoDynamics (LQCD) project. Security is provided by Kerberos authentication and authorization with additional fine grained control based on Lustre ACLs (Access Control List) and quotas. We investigate the impact of using various Kerberos security flavors on the I/O rates of CMS applications on client nodes reading and writing data to the Lustre filesystem, and on LQCD benchmarks. The clients can be real or virtual nodes. We are investigating additional options for user authentication based on user certificates.

  3. Power Allocation in Multiple Access Networks: Implementation Aspects via Verhulst and Perron-Frobenius Models

    Directory of Open Access Journals (Sweden)

    Fábio Engel de Camargo

    2012-11-01

    Full Text Available In this work, the Verhulst model and the Perron-Frobenius theorem are applied on the power control problem which is a concern in multiple access communication networks due to the multiple access interference. This paper deals with the performance versus complexity tradeoff of both power control algorithm (PCA, as well as highlights the computational cost aspects regarding the implementability of distributed PCA (DPCA version for both algorithms. As a proof-of-concept the DPCA implementation is carried out deploying a commercial point-floating DSP platform. Numerical results in terms of DSP cycles and computational time as well indicate a feasibility of implementing the PCA-Verhulst model in 2G and 3G cellular systems; b high computational cost for the PCA-Perron-Frobenius model.

  4. Cross-Layer Framework for Fine-Grained Channel Access in Next Generation High-Density WiFi Networks

    Institute of Scientific and Technical Information of China (English)

    ZHAO Haitao; ZHANG Shaojie; Emiliano Garcia-Palacios

    2016-01-01

    Densely deployed WiFi networks will play a crucial role in providing the capacity for next generation mobile internet.However,due to increasing interference,overlapped channels in WiFi networks and throughput efficiency degradation,densely deployed WiFi networks is not a guarantee to obtain higher throughput.An emergent challenge is how to efficiently utilize scarce spectrum resources,by matching physical layer resources to traffic demand.In this aspect,access control allocation strategies play a pivotal role but remain too coarse-grained.As a solution,this research proposes a flexible framework for fine-grained channel width adaptation and multi-channel access in WiFi networks.This approach,named SFCA (Subcarrier Fine-grained Channel Access),adopts DOFDM (Discontinuous Orthogonal Frequency Division Multiplexing) at the PHY layer.It allocates the frequency resource with a subcarrier granularity,which facilitates the channel width adaptation for multi-channel access and thus brings more flexibility and higher frequency efficiency.The MAC layer uses a frequencytime domain backoff scheme,which combines the popular time-domain BEB scheme with a frequency-domain backoff to decrease access collision,resulting in higher access probability for the contending nodes.SFCA is compared with FICA (an established access scheme) showing significant outperformance.Finally we present results for next generation 802.11 ac WiFi networks.

  5. Evaluating the Influence of Road Lighting on Traffic Safety at Accesses Using An Artificial Neural Network.

    Science.gov (United States)

    Xu, Yueru; Ye, Zhirui; Wang, Yuan; Wang, Chao; Sun, Cuicui

    2018-05-18

    This paper focuses on the effect of road lighting on road safety at accesses and tries to quantitatively analyze the relationship between road lighting and road safety. An Artificial Neural Network (ANN) was applied in this study. This method is one of the most popular machine-learning methods in recent years and does not require any pre-defined assumptions. This method was applied using field data collected from ten road segments in Nanjing, Jiangsu Province, China. The results show that the impact of road lighting on road safety at accesses is significant. In addition, road lighting has greater influence when vehicle speeds are higher or the number of lanes is larger. A threshold illuminance was also found in this paper, and the results show that the safety level at accesses will become stable when reaching this value. The improvement of illuminance can decrease the speed variation among vehicles and improve the safety level. In addition, high-grade roads need better illuminance at accesses. A threshold value can also be obtained based on related variables and used to develop scientific guidelines for traffic management organizations.

  6. Proof-of-Concept System for Opportunistic Spectrum Access in Multi-user Decentralized Networks

    Directory of Open Access Journals (Sweden)

    Sumit J. Darak

    2016-09-01

    Full Text Available Poor utilization of an electromagnetic spectrum and ever increasing demand for spectrum have led to surge of interests in opportunistic spectrum access (OSA based paradigms like cognitive radio and unlicensed LTE. In OSA for decentralized networks, frequency band selection from wideband spectrum is a challenging task since secondary users (SUs do not share any information with each other. In this paper, a new decision making policy (DMP has been proposed for OSA in the multi-user decentralized networks. First contribution is an accurate characterization of frequency bands using Bayes-UCB algorithm. Then, a novel SU orthogonization scheme using Bayes-UCB algorithm is proposed replacing randomization based scheme. At the end, USRP testbed has been developed for analyzing the performance of DMPs using real radio signals. Experimental results show that the proposed DMP offers significant improvement in spectrum utilization, fewer subband switching and collisions compared to other DMPs.

  7. Gigabit Access Passive Optical Network Using Wavelength Division Multiplexing—GigaWaM

    DEFF Research Database (Denmark)

    Iglesias Olmedo, Miguel; Suhr, Lau; Prince, Kamau

    2014-01-01

    passive optical network (WDM-PON) architecture that can deliver symmetric 1 Gb/s to 64 users over 20 km standard single mode fiber using the L and C bands for down and upstream, respectively. During the course of the project, a number of key enabling technologies were developed including tunable......This paper summarizes the research and technical achievements done under the EU project GigaWaM. The goal of this project was to develop a cost-effective solution that can meet the increasing bandwidth demands in access networks. The approach was to use a novel wavelength division multiplexing...... transceivers, athermal 50 GHz spaced arrayed waveguide grating multiplexer devices, novel hybridization technologies for integration of passive and active electro-optic devices, and system-level algorithms that ensure the quality of service. The outcome of the project proved a reliable, cost...

  8. Dynamic Downlink Spectrum Access for D2D-Enabled Heterogeneous Networks

    KAUST Repository

    Radaydeh, Redha Mahmoud Mesleh

    2018-01-15

    This paper proposes new approaches for underlay device- to-device (D2D) communication in spectrum-shared het- erogeneous cellular networks. It considers devices that share downlink resources and have an enabled D2D feature to improve coverage. The mode of operation classifies devices according to their experienced base station (BS) coverage, potential to be served by BS, ability of BS to meet their quality of service (QoS), and their downlink resources occupancy. The initiation of D2D cooperation is conditioned on proposed provisional access by an active device, wherein its serving BS attempts to meet its QoS using as low number of spectrum channels as possible, while treating remaining channels for feasible D2D cooperation. Detailed formulations for the mode of operation and a proposed D2D path allocation scheme are presented under perfect and imperfect operation scenarios. The developed results are generally applicable for any performance metric and network model.

  9. Digital Signal Processing for a Sliceable Transceiver for Optical Access Networks

    DEFF Research Database (Denmark)

    Saldaña Cercos, Silvia; Wagner, Christoph; Vegas Olmos, Juan José

    2015-01-01

    Methods to upgrade the network infrastructure to cope with current traffic demands has attracted increasing research efforts. A promising alternative is signal slicing. Signal slicing aims at re-using low bandwidth equipment to satisfy high bandwidth traffic demands. This technique has been used...... also for implementing full signal path symmetry in real-time oscilloscopes to provide performance and signal fidelity (i.e. lower noise and jitter). In this paper the key digital signal processing (DSP) subsystems required to achieve signal slicing are surveyed. It also presents, for the first time...... penalty is reported for 10 Gbps. Power savings of the order of hundreds of Watts can be obtained when using signal slicing as an alternative to 10 Gbps implemented access networks....

  10. Use and benefits of public access defibrillation in a nation-wide network

    DEFF Research Database (Denmark)

    Nielsen, Anne Møller; Folke, Fredrik; Lippert, Freddy Knudsen

    2013-01-01

    BACKGROUND: Automated External Defibrillators (AEDs) are known to increase survival after out-of-hospital cardiac arrest (OHCA). The aim of this study was to examine the use and benefit of public-access defibrillation (PAD) in a nation-wide network. We primarily sought to assess survival at 1 month...... to exercise (42% vs. 0%), and with improved 30-day survival (69% vs. 15%, p=0.001). Among those presenting with a shockable rhythm, 20 (65%) had Return of Spontaneous Circulation upon arrival of EMS and 8 (26%) were conscious, which emphasizes the diagnostic value of ECG downloads from AEDs. Survival could...

  11. Towards convergence of wireless and wireline signal transport in broadband access networks

    DEFF Research Database (Denmark)

    Yu, Xianbin; Prince, Kamau; Tafur Monroy, Idelfonso

    2010-01-01

    Hybrid optical wireless access networks are to play an important role in the realization of the vision of delivery of broadband services to the end-user any time, anywhere and at affordable costs. We present results of experiments conducted over a field deployed optical fibre links we successfull...... demonstrated converged wireless and wireline signal transport over a common fibre infrastructure. The type of signal used in this field deployed experiments cover WiMax, Impulse-radio ultra-wideband (UWB) and coherent transmission of baseband QPSK and radio-over-fibre signals....

  12. Probabilistic Medium Access Control for Full-Duplex Networks with Half-Duplex Clients

    OpenAIRE

    Chen, Shih-Ying; Huang, Ting-Feng; Lin, Kate Ching-Ju; Hong, H. -W. Peter; Sabharwal, Ashutosh

    2016-01-01

    The feasibility of practical in-band full-duplex radios has recently been demonstrated experimentally. One way to leverage full-duplex in a network setting is to enable three-node full-duplex, where a full- duplex access point (AP) transmits data to one node yet simultaneously receives data from another node. Such three-node full-duplex communication however introduces inter-client interference, directly impacting the full-duplex gain. It hence may not always be beneficial to enable three-nod...

  13. Parity-Check Network Coding for Multiple Access Relay Channel in Wireless Sensor Cooperative Communications

    Directory of Open Access Journals (Sweden)

    Du Bing

    2010-01-01

    Full Text Available A recently developed theory suggests that network coding is a generalization of source coding and channel coding and thus yields a significant performance improvement in terms of throughput and spatial diversity. This paper proposes a cooperative design of a parity-check network coding scheme in the context of a two-source multiple access relay channel (MARC model, a common compact model in hierarchical wireless sensor networks (WSNs. The scheme uses Low-Density Parity-Check (LDPC as the surrogate to build up a layered structure which encapsulates the multiple constituent LDPC codes in the source and relay nodes. Specifically, the relay node decodes the messages from two sources, which are used to generate extra parity-check bits by a random network coding procedure to fill up the rate gap between Source-Relay and Source-Destination transmissions. Then, we derived the key algebraic relationships among multidimensional LDPC constituent codes as one of the constraints for code profile optimization. These extra check bits are sent to the destination to realize a cooperative diversity as well as to approach MARC decode-and-forward (DF capacity.

  14. Analyzing the effect of routing protocols on media access control protocols in radio networks

    Energy Technology Data Exchange (ETDEWEB)

    Barrett, C. L. (Christopher L.); Drozda, M. (Martin); Marathe, A. (Achla); Marathe, M. V. (Madhav V.)

    2002-01-01

    We study the effect of routing protocols on the performance of media access control (MAC) protocols in wireless radio networks. Three well known MAC protocols: 802.11, CSMA, and MACA are considered. Similarly three recently proposed routing protocols: AODV, DSR and LAR scheme 1 are considered. The experimental analysis was carried out using GloMoSim: a tool for simulating wireless networks. The main focus of our experiments was to study how the routing protocols affect the performance of the MAC protocols when the underlying network and traffic parameters are varied. The performance of the protocols was measured w.r.t. five important parameters: (i) number of received packets, (ii) average latency of each packet, (iii) throughput (iv) long term fairness and (v) number of control packets at the MAC layer level. Our results show that combinations of routing and MAC protocols yield varying performance under varying network topology and traffic situations. The result has an important implication; no combination of routing protocol and MAC protocol is the best over all situations. Also, the performance analysis of protocols at a given level in the protocol stack needs to be studied not locally in isolation but as a part of the complete protocol stack. A novel aspect of our work is the use of statistical technique, ANOVA (Analysis of Variance) to characterize the effect of routing protocols on MAC protocols. This technique is of independent interest and can be utilized in several other simulation and empirical studies.

  15. Performance Evaluation of Peer-to-Peer Progressive Download in Broadband Access Networks

    Science.gov (United States)

    Shibuya, Megumi; Ogishi, Tomohiko; Yamamoto, Shu

    P2P (Peer-to-Peer) file sharing architectures have scalable and cost-effective features. Hence, the application of P2P architectures to media streaming is attractive and expected to be an alternative to the current video streaming using IP multicast or content delivery systems because the current systems require expensive network infrastructures and large scale centralized cache storage systems. In this paper, we investigate the P2P progressive download enabling Internet video streaming services. We demonstrated the capability of the P2P progressive download in both laboratory test network as well as in the Internet. Through the experiments, we clarified the contribution of the FTTH links to the P2P progressive download in the heterogeneous access networks consisting of FTTH and ADSL links. We analyzed the cause of some download performance degradation occurred in the experiment and discussed about the effective methods to provide the video streaming service using P2P progressive download in the current heterogeneous networks.

  16. Coordinated scheduling for the downlink of cloud radio-access networks

    KAUST Repository

    Douik, Ahmed S.

    2015-09-11

    This paper addresses the coordinated scheduling problem in cloud-enabled networks. Consider the downlink of a cloud-radio access network (CRAN), where the cloud is only responsible for the scheduling policy and the synchronization of the transmit frames across the connected base-stations (BS). The transmitted frame of every BS consists of several time/frequency blocks, called power-zones (PZ), maintained at fixed transmit power. The paper considers the problem of scheduling users to PZs and BSs in a coordinated fashion across the network, by maximizing a network-wide utility under the practical constraint that each user cannot be served by more than one base-station, but can be served by one or more power-zones within each base-station frame. The paper solves the problem using a graph theoretical approach by introducing the scheduling graph in which each vertex represents an association of users, PZs and BSs. The problem is formulated as a maximum weight clique, in which the weight of each vertex is the benefit of the association represented by that vertex. The paper further presents heuristic algorithms with low computational complexity. Simulation results show the performance of the proposed algorithms and suggest that the heuristics perform near optimal in low shadowing environments. © 2015 IEEE.

  17. High optical label switching add-drop multiplexer nodes with nanoseconds latency for 5G metro/access networks

    NARCIS (Netherlands)

    Calabretta, N.; Miao, W.; De Waardt, H.

    2016-01-01

    We present a novel optical add-drop multiplexer for next-generation metro/access networks by exploiting optical label switching technology. Experimental results of a ring network show nanoseconds add/drop operation including multicasting and power equalization of 50Gb/s data.

  18. A Lightweight Medium Access Protocol (LMAC) for Wireless Sensor Networks: Reducing Preamble Transmissions and Transceiver State Switches

    NARCIS (Netherlands)

    van Hoesel, L.F.W.; Havinga, Paul J.M.

    2004-01-01

    In this paper, we present an energy-efficient medium access protocol designed for wireless sensor networks. Although the protocol uses TDMA to give nodes in the WSN the opportunity to communicate collision-free, the network is self-organizing in terms of time slot assignment and synchronization. The

  19. An Effective Massive Sensor Network Data Access Scheme Based on Topology Control for the Internet of Things

    Directory of Open Access Journals (Sweden)

    Meng Yi

    2016-11-01

    Full Text Available This paper considers the distributed access and control problem of massive wireless sensor networks’ data access center for the Internet of Things, which is an extension of wireless sensor networks and an element of its topology structure. In the context of the arrival of massive service access requests at a virtual data center, this paper designs a massive sensing data access and control mechanism to improve the access efficiency of service requests and makes full use of the available resources at the data access center for the Internet of things. Firstly, this paper proposes a synergistically distributed buffer access model, which separates the information of resource and location. Secondly, the paper divides the service access requests into multiple virtual groups based on their characteristics and locations using an optimized self-organizing feature map neural network. Furthermore, this paper designs an optimal scheduling algorithm of group migration based on the combination scheme between the artificial bee colony algorithm and chaos searching theory. Finally, the experimental results demonstrate that this mechanism outperforms the existing schemes in terms of enhancing the accessibility of service requests effectively, reducing network delay, and has higher load balancing capacity and higher resource utility rate.

  20. Nonadditivity of quantum and classical capacities for entanglement breaking multiple-access channels and the butterfly network

    International Nuclear Information System (INIS)

    Grudka, Andrzej; Horodecki, Pawel

    2010-01-01

    We analyze quantum network primitives which are entanglement breaking. We show superadditivity of quantum and classical capacity regions for quantum multiple-access channels and the quantum butterfly network. Since the effects are especially visible at high noise they suggest that quantum information effects may be particularly helpful in the case of the networks with occasional high noise rates. The present effects provide a qualitative borderline between superadditivities of bipartite and multipartite systems.

  1. Sequence-specific bias correction for RNA-seq data using recurrent neural networks.

    Science.gov (United States)

    Zhang, Yao-Zhong; Yamaguchi, Rui; Imoto, Seiya; Miyano, Satoru

    2017-01-25

    The recent success of deep learning techniques in machine learning and artificial intelligence has stimulated a great deal of interest among bioinformaticians, who now wish to bring the power of deep learning to bare on a host of bioinformatical problems. Deep learning is ideally suited for biological problems that require automatic or hierarchical feature representation for biological data when prior knowledge is limited. In this work, we address the sequence-specific bias correction problem for RNA-seq data redusing Recurrent Neural Networks (RNNs) to model nucleotide sequences without pre-determining sequence structures. The sequence-specific bias of a read is then calculated based on the sequence probabilities estimated by RNNs, and used in the estimation of gene abundance. We explore the application of two popular RNN recurrent units for this task and demonstrate that RNN-based approaches provide a flexible way to model nucleotide sequences without knowledge of predetermined sequence structures. Our experiments show that training a RNN-based nucleotide sequence model is efficient and RNN-based bias correction methods compare well with the-state-of-the-art sequence-specific bias correction method on the commonly used MAQC-III data set. RNNs provides an alternative and flexible way to calculate sequence-specific bias without explicitly pre-determining sequence structures.

  2. Construction of an miRNA-Regulated Pathway Network Reveals Candidate Biomarkers for Postmenopausal Osteoporosis

    Directory of Open Access Journals (Sweden)

    Min Shao

    2017-01-01

    Full Text Available We aimed to identify risk pathways for postmenopausal osteoporosis (PMOP via establishing an microRNAs- (miRNA- regulated pathway network (MRPN. Firstly, we identified differential pathways through calculating gene- and pathway-level statistics based on the accumulated normal samples using the individual pathway aberrance score (iPAS. Significant pathways based on differentially expressed genes (DEGs using DAVID were extracted, followed by identifying the common pathways between iPAS and DAVID methods. Next, miRNAs prediction was implemented via calculating TargetScore values with precomputed input (log fold change (FC, TargetScan context score (TSCS, and probabilities of conserved targeting (PCT. An MRPN construction was constructed using the common genes in the common pathways and the predicted miRNAs. Using false discovery rate (FDR < 0.05, 279 differential pathways were identified. Using the criteria of FDR < 0.05 and log⁡FC≥2, 39 DEGs were retrieved, and these DEGs were enriched in 64 significant pathways identified by DAVID. Overall, 27 pathways were the common ones between two methods. Importantly, MAPK signaling pathway and PI3K-Akt signaling pathway were the first and second significantly enriched ones, respectively. These 27 common pathways separated PMOP from controls with the accuracy of 0.912. MAPK signaling pathway and PI3K/Akt signaling pathway might play crucial roles in PMOP.

  3. Cancer association study of aminoacyl-tRNA synthetase signaling network in glioblastoma.

    Directory of Open Access Journals (Sweden)

    Yong-Wan Kim

    Full Text Available Aminoacyl-tRNA synthetases (ARSs and ARS-interacting multifunctional proteins (AIMPs exhibit remarkable functional versatility beyond their catalytic activities in protein synthesis. Their non-canonical functions have been pathologically linked to cancers. Here we described our integrative genome-wide analysis of ARSs to show cancer-associated activities in glioblastoma multiforme (GBM, the most aggressive malignant primary brain tumor. We first selected 23 ARS/AIMPs (together referred to as ARSN, 124 cancer-associated druggable target genes (DTGs and 404 protein-protein interactors (PPIs of ARSs using NCI's cancer gene index. 254 GBM affymetrix microarray data in The Cancer Genome Atlas (TCGA were used to identify the probe sets whose expression were most strongly correlated with survival (Kaplan-Meier plots versus survival times, log-rank t-test <0.05. The analysis identified 122 probe sets as survival signatures, including 5 of ARSN (VARS, QARS, CARS, NARS, FARS, and 115 of DTGs and PPIs (PARD3, RXRB, ATP5C1, HSP90AA1, CD44, THRA, TRAF2, KRT10, MED12, etc. Of note, 61 survival-related probes were differentially expressed in three different prognosis subgroups in GBM patients and showed correlation with established prognosis markers such as age and phenotypic molecular signatures. CARS and FARS also showed significantly higher association with different molecular networks in GBM patients. Taken together, our findings demonstrate evidence for an ARSN biology-dominant contribution in the biology of GBM.

  4. Joint Mode Selection and Resource Allocation for Downlink Fog Radio Access Networks Supported D2D

    Directory of Open Access Journals (Sweden)

    Xiang Hongyu

    2015-09-01

    Full Text Available Presented as an innovative paradigm incorporating the cloud computing into radio access network, Cloud radio access networks (C-RANs have been shown advantageous in curtailing the capital and operating expenditures as well as providing better services to the customers. However, heavy burden on the non-ideal fronthaul limits performances of CRANs. Here we focus on the alleviation of burden on the fronthaul via the edge devices’ caches and propose a fog computing based RAN (F-RAN architecture with three candidate transmission modes: device to device, local distributed coordination, and global C-RAN. Followed by the proposed simple mode selection scheme, the average energy efficiency (EE of systems optimization problem considering congestion control is presented. Under the Lyapunov framework, the problem is reformulated as a joint mode selection and resource allocation problem, which can be solved by block coordinate descent method. The mathematical analysis and simulation results validate the benefits of F-RAN and an EE-delay tradeoff can be achieved by the proposed algorithm.

  5. Provably Secure Heterogeneous Access Control Scheme for Wireless Body Area Network.

    Science.gov (United States)

    Omala, Anyembe Andrew; Mbandu, Angolo Shem; Mutiria, Kamenyi Domenic; Jin, Chunhua; Li, Fagen

    2018-04-28

    Wireless body area network (WBAN) provides a medium through which physiological information could be harvested and transmitted to application provider (AP) in real time. Integrating WBAN in a heterogeneous Internet of Things (IoT) ecosystem would enable an AP to monitor patients from anywhere and at anytime. However, the IoT roadmap of interconnected 'Things' is still faced with many challenges. One of the challenges in healthcare is security and privacy of streamed medical data from heterogeneously networked devices. In this paper, we first propose a heterogeneous signcryption scheme where a sender is in a certificateless cryptographic (CLC) environment while a receiver is in identity-based cryptographic (IBC) environment. We then use this scheme to design a heterogeneous access control protocol. Formal security proof for indistinguishability against adaptive chosen ciphertext attack and unforgeability against adaptive chosen message attack in random oracle model is presented. In comparison with some of the existing access control schemes, our scheme has lower computation and communication cost.

  6. Wide Area Network Access to CMS Data Using the Lustre Filesystem

    CERN Document Server

    Rodríguez, J L; Prescott, C; Wu, Y; Kim, B; Fu, Y; Bourilkov, D; Avery, P

    2009-01-01

    In this paper, we explore the use of the Lustre cluster filesystem over the wide area network to access Compact Muon Solenoid (CMS) data stored on physical devices located hundreds of kilometres away. We describe the experimental testbed and report on the I/O performance of applications writing and reading data on the distributed Lustre filesystem established across the WAN. We compare the I/O performance of a CMS application to the performance obtained with IOzone, a standard benchmark tool. We then examine the I/O performance of the CMS application running multiple processes on a single server. And compare the Lustre results to results obtained on data stored on local filesystems. Our measurements reveal that the IOzone benchmark tool, accessing data sequentially, can saturate the Gbps network link that connects our Lustre client in Miami Florida to the Lustre storage located in Gainesville, Florida. We also find that the I/O rates of the CMS application is significantly less than what can be obtained with ...

  7. Simple measurement-based admission control for DiffServ access networks

    Science.gov (United States)

    Lakkakorpi, Jani

    2002-07-01

    In order to provide good Quality of Service (QoS) in a Differentiated Services (DiffServ) network, a dynamic admission control scheme is definitely needed as an alternative to overprovisioning. In this paper, we present a simple measurement-based admission control (MBAC) mechanism for DiffServ-based access networks. Instead of using active measurements only or doing purely static bookkeeping with parameter-based admission control (PBAC), the admission control decisions are based on bandwidth reservations and periodically measured & exponentially averaged link loads. If any link load on the path between two endpoints is over the applicable threshold, access is denied. Link loads are periodically sent to Bandwidth Broker (BB) of the routing domain, which makes the admission control decisions. The information needed in calculating the link loads is retrieved from the router statistics. The proposed admission control mechanism is verified through simulations. Our results prove that it is possible to achieve very high bottleneck link utilization levels and still maintain good QoS.

  8. Secret Shoppers Find Access To Providers And Network Accuracy Lacking For Those In Marketplace And Commercial Plans.

    Science.gov (United States)

    Haeder, Simon F; Weimer, David L; Mukamel, Dana B

    2016-07-01

    The adequacy of provider networks for plans sold through insurance Marketplaces established under the Affordable Care Act has received much scrutiny recently. Various studies have established that networks are generally narrow. To learn more about network adequacy and access to care, we investigated two questions. First, no matter the nominal size of a network, can patients gain access to primary care services from providers of their choice in a timely manner? Second, how does access compare to plans sold outside insurance Marketplaces? We conducted a "secret shopper" survey of 743 primary care providers from five of California's nineteen insurance Marketplace pricing regions in the summer of 2015. Our findings indicate that obtaining access to primary care providers was generally equally challenging both inside and outside insurance Marketplaces. In less than 30 percent of cases were consumers able to schedule an appointment with an initially selected physician provider. Information about provider networks was often inaccurate. Problems accessing services for patients with acute conditions were particularly troubling. Effectively addressing issues of network adequacy requires more accurate provider information. Project HOPE—The People-to-People Health Foundation, Inc.

  9. Connectivity and conditional models of access and abundance of species in stream networks.

    Science.gov (United States)

    Chelgren, Nathan D; Dunham, Jason B

    2015-07-01

    Barriers to passage of aquatic organisms at stream road crossings are a major cause of habitat fragmentation in stream networks. Accordingly, large investments have been made to restore passage at these crossings, but often without estimation of population-level benefits. Here, we describe a broad-scale approach to quantifying the effectiveness of passage restoration in terms interpretable at population levels, namely numbers of fish and length of stream gained through restoration, by sampling abundance in a study design that accounts for variable biogeographic species pools, variable stream and barrier configurations, and variable probabilities of capture and detectability for multiple species. We modified an existing zero-inflated negative-binomial model to estimate the probability of site access, abundance conditional on access, and capture probability of individual fish. Therein, we modeled probability of access as a function of gradient, stream road-crossing type, and downstream access by fish simultaneously with a predictive model for abundance at sites accessible to fish. Results indicated that replacement of barriers with new crossing designs intended to allow for greater movement was associated with dramatically higher probability of access for all fishes, including migratory Pacific salmon, trout, sculpin, and lamprey. Conversely, existing non-replaced crossings negatively impacted fish distributions. Assuming no downstream constraints on access, we estimated the potential length of stream restored by the program ranged between 7.33 (lamprey) and 15.28 km (small coastal cutthroat and rainbow trout). These contributions represented a fraction of the total length available upstream (187 km) of replaced crossings. When limited ranges of species were considered, the estimated contributions of culvert replacement were reduced (1.65-km range, for longnose dace to 12.31 km for small coastal cutthroat and rainbow trout). Numbers of fish contributed ranged from

  10. PERFORMANCE OF OPPORTUNISTIC SPECTRUM ACCESS WITH SENSING ERROR IN COGNITIVE RADIO AD HOC NETWORKS

    Directory of Open Access Journals (Sweden)

    N. ARMI

    2012-04-01

    Full Text Available Sensing in opportunistic spectrum access (OSA has a responsibility to detect the available channel by performing binary hypothesis as busy or idle states. If channel is busy, secondary user (SU cannot access and refrain from data transmission. SU is allowed to access when primary user (PU does not use it (idle states. However, channel is sensed on imperfect communication link. Fading, noise and any obstacles existed can cause sensing errors in PU signal detection. False alarm detects idle states as a busy channel while miss-identification detects busy states as an idle channel. False detection makes SU refrain from transmission and reduces number of bits transmitted. On the other hand, miss-identification causes SU collide to PU transmission. This paper study the performance of OSA based on the greedy approach with sensing errors by the restriction of maximum collision probability allowed (collision threshold by PU network. The throughput of SU and spectrum capacity metric is used to evaluate OSA performance and make comparisons to those ones without sensing error as function of number of slot based on the greedy approach. The relations between throughput and signal to noise ratio (SNR with different collision probability as well as false detection with different SNR are presented. According to the obtained results show that CR users can gain the reward from the previous slot for both of with and without sensing errors. It is indicated by the throughput improvement as slot number increases. However, sensing on imperfect channel with sensing errors can degrade the throughput performance. Subsequently, the throughput of SU and spectrum capacity improves by increasing maximum collision probability allowed by PU network as well. Due to frequent collision with PU, the throughput of SU and spectrum capacity decreases at certain value of collision threshold. Computer simulation is used to evaluate and validate these works.

  11. Adaptive MAC-layer protocol for multiservice digital access via tree and branch communication networks

    Science.gov (United States)

    Sriram, Kotikalapudi; Li, Chia-Chang; Magill, Peter; Whitaker, Norman A.; Dail, James E.; Dajer, Miguel A.; Siller, Curtis A.

    1995-11-01

    Described here is an adaptive MAC-layer protocol that supports multiservice (STM and ATM) applications in the context of subscriber access to tree and branch (e.g., fiber-coaxial cable) networks. The protocol adapts to changing demands for a mix of circuit and cell mode applications, and efficiently allocates upstream and downstream bandwidth to a variety of bursty and isochronous traffic sources. In the case of a hybrid fiber-coaxial (HFC) network the protocol resides in customer premises equipment and a common head-end controller. A medium-access control (MAC) processor provides for dividing the time domain for a given digital bitstream into successive frames, each with multiple STM and ATM time slots. Within the STM region of a frame, variable length time slots are allocated to calls (e.g., telephony, video telephony) requiring different amounts of bandwidth. A contention access signaling channel is also provided in this region for call control and set-up requests. Within the ATM region fixed-length time slots accommodate one individual ATM cell. These ATM time slots may be reserved for a user for the duration of a call or burst of successive ATM cells, or shared via a contention process. At least one contention time slot is available for signaling messages related to ATM call control and set-up requests. Further, the fixed-length ATM time slots may be reserved by a user for the duration of a call, or shared through a contention process. This paper describes the MAC-layer protocol, its relation to circuit- and ATM- amenable applications, and its performance with respect to signaling throughput and latency, and bandwidth efficiency for several service scenarios.

  12. Security of social network credentials for accessing course portal: Users' experience

    Science.gov (United States)

    Katuk, Norliza; Fong, Choo Sok; Chun, Koo Lee

    2015-12-01

    Social login (SL) has recently emerged as a solution for single sign-on (SSO) within the web and mobile environments. It allows users to use their existing social network credentials (SNC) to login to third party web applications without the need to create a new identity in the intended applications' database. Although it has been used by many web application providers, its' applicability in accessing learning materials is not yet fully investigated. Hence, this research aims to explore users' (i.e., instructors' and students') perception and experience on the security of SL for accessing learning contents. A course portal was developed for students at a higher learning institution and it provides two types of user authentications (i) traditional user authentication, and (ii) SL facility. Users comprised instructors and students evaluated the login facility of the course portal through a controlled lab experimental study following the within-subject design. The participants provided their feedback in terms of the security of SL for accessing learning contents. The study revealed that users preferred to use SL over the traditional authentication, however, they concerned on the security of SL and their privacy.

  13. The challenges of M2M massive access in wireless cellular networks

    Directory of Open Access Journals (Sweden)

    Andrea Biral

    2015-02-01

    Full Text Available The next generation of communication systems, which is commonly referred to as 5G, is expected to support, besides the traditional voice and data services, new communication paradigms, such as Internet of Things (IoT and Machine-to-Machine (M2M services, which involve communication between Machine-Type Devices (MTDs in a fully automated fashion, thus, without or with minimal human intervention. Although the general requirements of 5G systems are progressively taking shape, the technological issues raised by such a vision are still partially unclear. Nonetheless, general consensus has been reached upon some specific challenges, such as the need for 5G wireless access networks to support massive access by MTDs, as a consequence of the proliferation of M2M services. In this paper, we describe the main challenges raised by the M2M vision, focusing in particular on the problems related to the support of massive MTD access in current cellular communication systems. Then we analyze the most common approaches proposed in the literature to enable the coexistence of conventional and M2M services in the current and next generation of cellular wireless systems. We finally conclude by pointing out the research challenges that require further investigation in order to provide full support to the M2M paradigm.

  14. Multiple-Antenna Interference Cancellation for WLAN with MAC Interference Avoidance in Open Access Networks

    Directory of Open Access Journals (Sweden)

    Alexandr M. Kuzminskiy

    2007-10-01

    Full Text Available The potential of multiantenna interference cancellation receiver algorithms for increasing the uplink throughput in WLAN systems such as 802.11 is investigated. The medium access control (MAC in such systems is based on carrier sensing multiple-access with collision avoidance (CSMA/CA, which itself is a powerful tool for the mitigation of intrasystem interference. However, due to the spatial dependence of received signal strengths, it is possible for the collision avoidance mechanism to fail, resulting in packet collisions at the receiver and a reduction in system throughput. The CSMA/CA MAC protocol can be complemented in such scenarios by interference cancellation (IC algorithms at the physical (PHY layer. The corresponding gains in throughput are a result of the complex interplay between the PHY and MAC layers. It is shown that semiblind interference cancellation techniques are essential for mitigating the impact of interference bursts, in particular since these are typically asynchronous with respect to the desired signal burst. Semiblind IC algorithms based on second- and higher-order statistics are compared to the conventional no-IC and training-based IC techniques in an open access network (OAN scenario involving home and visiting users. It is found that the semiblind IC algorithms significantly outperform the other techniques due to the bursty and asynchronous nature of the interference caused by the MAC interference avoidance scheme.

  15. Multiple-Antenna Interference Cancellation for WLAN with MAC Interference Avoidance in Open Access Networks

    Directory of Open Access Journals (Sweden)

    Kuzminskiy Alexandr M

    2007-01-01

    Full Text Available The potential of multiantenna interference cancellation receiver algorithms for increasing the uplink throughput in WLAN systems such as 802.11 is investigated. The medium access control (MAC in such systems is based on carrier sensing multiple-access with collision avoidance (CSMA/CA, which itself is a powerful tool for the mitigation of intrasystem interference. However, due to the spatial dependence of received signal strengths, it is possible for the collision avoidance mechanism to fail, resulting in packet collisions at the receiver and a reduction in system throughput. The CSMA/CA MAC protocol can be complemented in such scenarios by interference cancellation (IC algorithms at the physical (PHY layer. The corresponding gains in throughput are a result of the complex interplay between the PHY and MAC layers. It is shown that semiblind interference cancellation techniques are essential for mitigating the impact of interference bursts, in particular since these are typically asynchronous with respect to the desired signal burst. Semiblind IC algorithms based on second- and higher-order statistics are compared to the conventional no-IC and training-based IC techniques in an open access network (OAN scenario involving home and visiting users. It is found that the semiblind IC algorithms significantly outperform the other techniques due to the bursty and asynchronous nature of the interference caused by the MAC interference avoidance scheme.

  16. JavaScript Access to DICOM Network and Objects in Web Browser.

    Science.gov (United States)

    Drnasin, Ivan; Grgić, Mislav; Gogić, Goran

    2017-10-01

    Digital imaging and communications in medicine (DICOM) 3.0 standard provides the baseline for the picture archiving and communication systems (PACS). The development of Internet and various communication media initiated demand for non-DICOM access to PACS systems. Ever-increasing utilization of the web browsers, laptops and handheld devices, as opposed to desktop applications and static organizational computers, lead to development of different web technologies. The DICOM standard officials accepted those subsequently as tools of alternative access. This paper provides an overview of the current state of development of the web access technology to the DICOM repositories. It presents a different approach of using HTML5 features of the web browsers through the JavaScript language and the WebSocket protocol by enabling real-time communication with DICOM repositories. JavaScript DICOM network library, DICOM to WebSocket proxy and a proof-of-concept web application that qualifies as a DICOM 3.0 device were developed.

  17. Revenue-Maximizing Radio Access Technology Selection with Net Neutrality Compliance in Heterogeneous Wireless Networks

    Directory of Open Access Journals (Sweden)

    Elissar Khloussy

    2018-01-01

    Full Text Available The net neutrality principle states that users should have equal access to all Internet content and that Internet Service Providers (ISPs should not practice differentiated treatment on any of the Internet traffic. While net neutrality aims to restrain any kind of discrimination, it also grants exemption to a certain category of traffic known as specialized services (SS, by allowing the ISP to dedicate part of the resources for the latter. In this work, we consider a heterogeneous LTE/WiFi wireless network and we investigate revenue-maximizing Radio Access Technology (RAT selection strategies that are net neutrality-compliant, with exemption granted to SS traffic. Our objective is to find out how the bandwidth reservation for SS traffic would be made in a way that allows maximizing the revenue while being in compliance with net neutrality and how the choice of the ratio of reserved bandwidth would affect the revenue. The results show that reserving bandwidth for SS traffic in one RAT (LTE can achieve higher revenue. On the other hand, when the capacity is reserved across both LTE and WiFi, higher social benefit in terms of number of admitted users can be realized, as well as lower blocking probability for the Internet access traffic.

  18. Data Access Based on a Guide Map of the Underwater Wireless Sensor Network.

    Science.gov (United States)

    Wei, Zhengxian; Song, Min; Yin, Guisheng; Song, Houbing; Wang, Hongbin; Ma, Xuefei; Cheng, Albert M K

    2017-10-17

    Underwater wireless sensor networks (UWSNs) represent an area of increasing research interest, as data storage, discovery, and query of UWSNs are always challenging issues. In this paper, a data access based on a guide map (DAGM) method is proposed for UWSNs. In DAGM, the metadata describes the abstracts of data content and the storage location. The center ring is composed of nodes according to the shortest average data query path in the network in order to store the metadata, and the data guide map organizes, diffuses and synchronizes the metadata in the center ring, providing the most time-saving and energy-efficient data query service for the user. For this method, firstly the data is stored in the UWSN. The storage node is determined, the data is transmitted from the sensor node (data generation source) to the storage node, and the metadata is generated for it. Then, the metadata is sent to the center ring node that is the nearest to the storage node and the data guide map organizes the metadata, diffusing and synchronizing it to the other center ring nodes. Finally, when there is query data in any user node, the data guide map will select a center ring node nearest to the user to process the query sentence, and based on the shortest transmission delay and lowest energy consumption, data transmission routing is generated according to the storage location abstract in the metadata. Hence, specific application data transmission from the storage node to the user is completed. The simulation results demonstrate that DAGM has advantages with respect to data access time and network energy consumption.

  19. Sophisticated Online Learning Scheme for Green Resource Allocation in 5G Heterogeneous Cloud Radio Access Networks

    KAUST Repository

    Alqerm, Ismail

    2018-01-23

    5G is the upcoming evolution for the current cellular networks that aims at satisfying the future demand for data services. Heterogeneous cloud radio access networks (H-CRANs) are envisioned as a new trend of 5G that exploits the advantages of heterogeneous and cloud radio access networks to enhance spectral and energy efficiency. Remote radio heads (RRHs) are small cells utilized to provide high data rates for users with high quality of service (QoS) requirements, while high power macro base station (BS) is deployed for coverage maintenance and low QoS users service. Inter-tier interference between macro BSs and RRHs and energy efficiency are critical challenges that accompany resource allocation in H-CRANs. Therefore, we propose an efficient resource allocation scheme using online learning, which mitigates interference and maximizes energy efficiency while maintaining QoS requirements for all users. The resource allocation includes resource blocks (RBs) and power. The proposed scheme is implemented using two approaches: centralized, where the resource allocation is processed at a controller integrated with the baseband processing unit and decentralized, where macro BSs cooperate to achieve optimal resource allocation strategy. To foster the performance of such sophisticated scheme with a model free learning, we consider users\\' priority in RB allocation and compact state representation learning methodology to improve the speed of convergence and account for the curse of dimensionality during the learning process. The proposed scheme including both approaches is implemented using software defined radios testbed. The obtained results and simulation results confirm that the proposed resource allocation solution in H-CRANs increases the energy efficiency significantly and maintains users\\' QoS.

  20. Non-Orthogonal Multiple Access for Large-Scale 5G Networks: Interference Aware Design

    KAUST Repository

    Ali, Konpal S.

    2017-09-18

    Non-orthogonal multiple access (NOMA) is promoted as a key component of 5G cellular networks. As the name implies, NOMA operation introduces intracell interference (i.e., interference arising within the cell) to the cellular operation. The intracell interference is managed by careful NOMA design (e.g., user clustering and resource allocation) along with successive interference cancellation. However, most of the proposed NOMA designs are agnostic to intercell interference (i.e., interference from outside the cell), which is a major performance limiting parameter in 5G networks. This article sheds light on the drastic negative-impact of intercell interference on the NOMA performance and advocates interference-aware NOMA design that jointly accounts for both intracell and intercell interference. To this end, a case study for fair NOMA operation is presented and intercell interference mitigation techniques for NOMA networks are discussed. This article also investigates the potential of integrating NOMA with two important 5G transmission schemes, namely, full duplex and device-to-device communication. This is important since the ambitious performance defined by the 3rd Generation Partnership Project (3GPP) for 5G is foreseen to be realized via seamless integration of several new technologies and transmission techniques.

  1. Throughput Fairness Enhancement Using Differentiated Channel Access in Heterogeneous Sensor Networks

    Directory of Open Access Journals (Sweden)

    James Jong Hyuk Park

    2011-06-01

    Full Text Available Nowadays, with wireless sensor networks (WSNs being widely applied to diverse applications, heterogeneous sensor networks (HSNs, which can simultaneously support multiple sensing tasks in a common sensor field, are being considered as the general form of WSN system deployment. In HSNs, each application generates data packets with a different size, thereby resulting in fairness issues in terms of the network performance. In this paper, we present the design and performance evaluation of a differentiated channel access scheme (abbreviated to DiffCA to resolve the fairness problem in HSNs. DiffCA achieves fair performance among the application groups by providing each node with an additional backoff counter, whose value varies according to the size of the packets. A mathematical model based on the discrete time Markov chain is presented and is analyzed to measure the performance of DiffCA. The numerical results show that the performance degradation of disadvantaged application groups can be effectively compensated for by DiffCA. Simulation results are given to verify the accuracy of the numerical model.

  2. QoS Differentiated and Fair Packet Scheduling in Broadband Wireless Access Networks

    Directory of Open Access Journals (Sweden)

    Zhang Yan

    2009-01-01

    Full Text Available This paper studies the packet scheduling problem in Broadband Wireless Access (BWA networks. The key difficulties of the BWA scheduling problem lie in the high variability of wireless channel capacity and the unknown model of packet arrival process. It is difficult for traditional heuristic scheduling algorithms to handle the situation and guarantee satisfying performance in BWA networks. In this paper, we introduce learning-based approach for a better solution. Specifically, we formulate the packet scheduling problem as an average cost Semi-Markov Decision Process (SMDP. Then, we solve the SMDP by using reinforcement learning. A feature-based linear approximation and the Temporal-Difference learning technique are employed to produce a near optimal solution of the corresponding SMDP problem. The proposed algorithm, called Reinforcement Learning Scheduling (RLS, has in-built capability of self-training. It is able to adaptively and timely regulate its scheduling policy according to the instantaneous network conditions. Simulation results indicate that RLS outperforms two classical scheduling algorithms and simultaneously considers: (i effective QoS differentiation, (ii high bandwidth utilization, and (iii both short-term and long-term fairness.

  3. Fiber in access technologies and network convergence: an opportunity for optical integration

    Science.gov (United States)

    Ghiggino, Pierpaolo C.

    2008-11-01

    Broadband networks are among the fastest growing segment in telecom. The initial and still very significant push originated with xDSL technologies and indeed a significant amount of research and development is still occurring in this field with impressive results and allowing for a remarkable use of the installed copper infrastructure way beyond its originally planned bandwidth capabilities. However it is clear that ultimately a more suitable fiber based infrastructure will be needed in order to reduce both operational and network technology costs. Such cost reduction in inevitable as the added value to end users is only related to services and these cannot be priced outside a sensible window, whilst the related bandwidth increase is much more dramatic and its huge variability must be met with little or no cost impact by the network and its operation. Fiber in access has indeed the potential to cope with a huge bandwidth demand for many years to come as its inherent bandwidth capabilities are only just tapped by current service requirements. However the whole technology supply chain must follow in line. In particular optical technology must brace itself to cope with the required much larger deployment and greater cost effectiveness, whilst at the same time deliver performance suitable to the bandwidth increase offered in the longer term by the fiber medium. This paper looks at this issues and debates the opportunities for a new class of optical devices making use of the progress in optical integration

  4. Throughput fairness enhancement using differentiated channel access in heterogeneous sensor networks.

    Science.gov (United States)

    Kim, Eui-Jik; Shon, Taeshik; Park, James Jong Hyuk; Jeong, Young-Sik

    2011-01-01

    Nowadays, with wireless sensor networks (WSNs) being widely applied to diverse applications, heterogeneous sensor networks (HSNs), which can simultaneously support multiple sensing tasks in a common sensor field, are being considered as the general form of WSN system deployment. In HSNs, each application generates data packets with a different size, thereby resulting in fairness issues in terms of the network performance. In this paper, we present the design and performance evaluation of a differentiated channel access scheme (abbreviated to DiffCA) to resolve the fairness problem in HSNs. DiffCA achieves fair performance among the application groups by providing each node with an additional backoff counter, whose value varies according to the size of the packets. A mathematical model based on the discrete time Markov chain is presented and is analyzed to measure the performance of DiffCA. The numerical results show that the performance degradation of disadvantaged application groups can be effectively compensated for by DiffCA. Simulation results are given to verify the accuracy of the numerical model.

  5. Concerted motions in HIV-1 TAR RNA may allow access to bound state conformations: RNA dynamics from NMR residual dipolar couplings.

    Science.gov (United States)

    Al-Hashimi, Hashim M; Gosser, Yuying; Gorin, Andrey; Hu, Weidong; Majumdar, Ananya; Patel, Dinshaw J

    2002-01-11

    Ground-state dynamics in RNA is a critical precursor for structural adaptation observed ubiquitously in protein-RNA recognition. A tertiary conformational analysis of the stem-loop structural element in the transactivation response element (TAR) from human immunodeficiency virus type 1 (HIV-I) RNA is presented using recently introduced NMR methods that rely on the measurement of residual dipolar couplings (RDC) in partially oriented systems. Order matrix analysis of RDC data provides evidence for inter-helical motions that are of amplitude 46(+/-4) degrees, of random directional character, and that are executed about an average conformation with an inter-helical angle between 44 degrees and 54 degrees. The generated ensemble of TAR conformations have different organizations of functional groups responsible for interaction with the trans-activator protein Tat, including conformations similar to the previously characterized bound-state conformation. These results demonstrate the utility of RDC-NMR for simultaneously characterizing RNA tertiary dynamics and average conformation, and indicate an avenue for TAR complex formation involving tertiary structure capture. Copyright 2001 Academic Press.

  6. Mycobacterium tuberculosis Transfer RNA Induces IL-12p70 via Synergistic Activation of Pattern Recognition Receptors within a Cell Network.

    Science.gov (United States)

    Keegan, Caroline; Krutzik, Stephan; Schenk, Mirjam; Scumpia, Philip O; Lu, Jing; Pang, Yan Ling Joy; Russell, Brandon S; Lim, Kok Seong; Shell, Scarlet; Prestwich, Erin; Su, Dan; Elashoff, David; Hershberg, Robert M; Bloom, Barry R; Belisle, John T; Fortune, Sarah; Dedon, Peter C; Pellegrini, Matteo; Modlin, Robert L

    2018-05-01

    Upon recognition of a microbial pathogen, the innate and adaptive immune systems are linked to generate a cell-mediated immune response against the foreign invader. The culture filtrate of Mycobacterium tuberculosis contains ligands, such as M. tuberculosis tRNA, that activate the innate immune response and secreted Ags recognized by T cells to drive adaptive immune responses. In this study, bioinformatics analysis of gene-expression profiles derived from human PBMCs treated with distinct microbial ligands identified a mycobacterial tRNA-induced innate immune network resulting in the robust production of IL-12p70, a cytokine required to instruct an adaptive Th1 response for host defense against intracellular bacteria. As validated by functional studies, this pathway contained a feed-forward loop, whereby the early production of IL-18, type I IFNs, and IL-12p70 primed NK cells to respond to IL-18 and produce IFN-γ, enhancing further production of IL-12p70. Mechanistically, tRNA activates TLR3 and TLR8, and this synergistic induction of IL-12p70 was recapitulated by the addition of a specific TLR8 agonist with a TLR3 ligand to PBMCs. These data indicate that M. tuberculosis tRNA activates a gene network involving the integration of multiple innate signals, including types I and II IFNs, as well as distinct cell types to induce IL-12p70. Copyright © 2018 by The American Association of Immunologists, Inc.

  7. Energy-Efficient Boarder Node Medium Access Control Protocol for Wireless Sensor Networks

    Science.gov (United States)

    Razaque, Abdul; Elleithy, Khaled M.

    2014-01-01

    This paper introduces the design, implementation, and performance analysis of the scalable and mobility-aware hybrid protocol named boarder node medium access control (BN-MAC) for wireless sensor networks (WSNs), which leverages the characteristics of scheduled and contention-based MAC protocols. Like contention-based MAC protocols, BN-MAC achieves high channel utilization, network adaptability under heavy traffic and mobility, and low latency and overhead. Like schedule-based MAC protocols, BN-MAC reduces idle listening time, emissions, and collision handling at low cost at one-hop neighbor nodes and achieves high channel utilization under heavy network loads. BN-MAC is particularly designed for region-wise WSNs. Each region is controlled by a boarder node (BN), which is of paramount importance. The BN coordinates with the remaining nodes within and beyond the region. Unlike other hybrid MAC protocols, BN-MAC incorporates three promising models that further reduce the energy consumption, idle listening time, overhearing, and congestion to improve the throughput and reduce the latency. One of the models used with BN-MAC is automatic active and sleep (AAS), which reduces the ideal listening time. When nodes finish their monitoring process, AAS lets them automatically go into the sleep state to avoid the idle listening state. Another model used in BN-MAC is the intelligent decision-making (IDM) model, which helps the nodes sense the nature of the environment. Based on the nature of the environment, the nodes decide whether to use the active or passive mode. This decision power of the nodes further reduces energy consumption because the nodes turn off the radio of the transceiver in the passive mode. The third model is the least-distance smart neighboring search (LDSNS), which determines the shortest efficient path to the one-hop neighbor and also provides cross-layering support to handle the mobility of the nodes. The BN-MAC also incorporates a semi

  8. Energy-efficient boarder node medium access control protocol for wireless sensor networks.

    Science.gov (United States)

    Razaque, Abdul; Elleithy, Khaled M

    2014-03-12

    This paper introduces the design, implementation, and performance analysis of the scalable and mobility-aware hybrid protocol named boarder node medium access control (BN-MAC) for wireless sensor networks (WSNs), which leverages the characteristics of scheduled and contention-based MAC protocols. Like contention-based MAC protocols, BN-MAC achieves high channel utilization, network adaptability under heavy traffic and mobility, and low latency and overhead. Like schedule-based MAC protocols, BN-MAC reduces idle listening time, emissions, and collision handling at low cost at one-hop neighbor nodes and achieves high channel utilization under heavy network loads. BN-MAC is particularly designed for region-wise WSNs. Each region is controlled by a boarder node (BN), which is of paramount importance. The BN coordinates with the remaining nodes within and beyond the region. Unlike other hybrid MAC protocols, BN-MAC incorporates three promising models that further reduce the energy consumption, idle listening time, overhearing, and congestion to improve the throughput and reduce the latency. One of the models used with BN-MAC is automatic active and sleep (AAS), which reduces the ideal listening time. When nodes finish their monitoring process, AAS lets them automatically go into the sleep state to avoid the idle listening state. Another model used in BN-MAC is the intelligent decision-making (IDM) model, which helps the nodes sense the nature of the environment. Based on the nature of the environment, the nodes decide whether to use the active or passive mode. This decision power of the nodes further reduces energy consumption because the nodes turn off the radio of the transceiver in the passive mode. The third model is the least-distance smart neighboring search (LDSNS), which determines the shortest efficient path to the one-hop neighbor and also provides cross-layering support to handle the mobility of the nodes. The BN-MAC also incorporates a semi

  9. Energy-Efficient Boarder Node Medium Access Control Protocol for Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Abdul Razaque

    2014-03-01

    Full Text Available This paper introduces the design, implementation, and performance analysis of the scalable and mobility-aware hybrid protocol named boarder node medium access control (BN-MAC for wireless sensor networks (WSNs, which leverages the characteristics of scheduled and contention-based MAC protocols. Like contention-based MAC protocols, BN-MAC achieves high channel utilization, network adaptability under heavy traffic and mobility, and low latency and overhead. Like schedule-based MAC protocols, BN-MAC reduces idle listening time, emissions, and collision handling at low cost at one-hop neighbor nodes and achieves high channel utilization under heavy network loads. BN-MAC is particularly designed for region-wise WSNs. Each region is controlled by a boarder node (BN, which is of paramount importance. The BN coordinates with the remaining nodes within and beyond the region. Unlike other hybrid MAC protocols, BN-MAC incorporates three promising models that further reduce the energy consumption, idle listening time, overhearing, and congestion to improve the throughput and reduce the latency. One of the models used with BN-MAC is automatic active and sleep (AAS, which reduces the ideal listening time. When nodes finish their monitoring process, AAS lets them automatically go into the sleep state to avoid the idle listening state. Another model used in BN-MAC is the intelligent decision-making (IDM model, which helps the nodes sense the nature of the environment. Based on the nature of the environment, the nodes decide whether to use the active or passive mode. This decision power of the nodes further reduces energy consumption because the nodes turn off the radio of the transceiver in the passive mode. The third model is the least-distance smart neighboring search (LDSNS, which determines the shortest efficient path to the one-hop neighbor and also provides cross-layering support to handle the mobility of the nodes. The BN-MAC also incorporates a semi

  10. Medium access control and hardware prototype designs for low-energy wireless sensor networks

    Energy Technology Data Exchange (ETDEWEB)

    Kohvakka, M.

    2009-07-01

    A Wireless Sensor Network (WSN) is an emerging technology consisting of small, cheap, and ultra-low energy sensor nodes, which cooperatively monitor physical quantities, actuate, and perform data processing tasks. A deployment may comprise thousands of randomly distributed autonomous nodes, which must self-configure and create a multi-hop network topology.This thesis focuses on low-energy WSNs targeting to long network lifetime. The main research problem is the combination of adaptive and scalable multi-hop networking with constrained energy budget, processing power, and communication bandwidth. The research problem is approached by energy-efficient protocols and low-power sensor node platforms. The main contribution of this thesis is an energy-efficient Medium Access Control (MAC) design for TUTWSN (Tampere University of Technology Wireless Sensor Network). The design comprises channel access and networking mechanisms, which specify data exchange, link synchronization, network self-configuration, and neighbor discovery operations. The second outcome are several low-power sensor node platforms, which have been designed and implemented to evaluate the performance of the MAC design and hardware components in real deployments. The third outcome are the performance models and analysis of several MAC designs including TUTWSN, IEEE 802.15.4, and the most essential research proposals.The results and conclusion of this Thesis indicate that it is possible to implement multi-hop WSNs in harsh and dynamic operation conditions with years of lifetime using current low-cost components and batteries. Energy analysis results indicate that the lowest energy consumption is achieved by using simple and high data-rate transceivers. It is also critical to minimize sleep mode power consumption of all components and to use accurate wake-up timers. However, the selection of components constitutes only a minor part of the solution, and an energy-efficient MAC layer design being able to

  11. Design of Active Queue Management for Robust Control on Access Router for Heterogeneous Networks

    Directory of Open Access Journals (Sweden)

    Åhlund Christer

    2011-01-01

    Full Text Available The Internet architecture is a packet switching technology that allows dynamic sharing of bandwidth among different flows with in an IP network. Packets are stored and forwarded from one node to the next until reaching their destination. Major issues in this integration are congestion control and how to meet different quality of service requirements associated with various services. In other words streaming media quality degrades with increased packet delay and jitter caused by network congestion. To mitigate the impact of network congestion, various techniques have been used to improve multimedia quality and one of those techniques is Active Queue Management (AQM. Access routers require a buffer to hold packets during times of congestion. A large buffer can absorb the bursty arrivals, and this tends to increase the link utilizations but results in higher queuing delays. Traffic burstiness has a considerable negative impact on network performance. AQM is now considered an effective congestion control mechanism for enhancing transport protocol performance over wireless links. In order to have good link utilization, it is necessary for queues to adapt to varying traffic loads. This paper considers a particular scheme which is called Adaptive AQM (AAQM and studies its performance in the presence of feedback delays and its ability to maintain a small queue length as well as its robustness in the presence of traffic burstiness. The paper also presents a method based on the well-known Markov Modulated Poisson Process (MPP to capture traffic burstiness and buffer occupancy. To demonstrate the generality of the presented method, an analytic model is described and verified by extensive simulations of different adaptive AQM algorithms. The analysis and simulations show that AAQM outperforms the other AQMs with respect to responsiveness and robustness.

  12. An open-access modeled passenger flow matrix for the global air network in 2010.

    Science.gov (United States)

    Huang, Zhuojie; Wu, Xiao; Garcia, Andres J; Fik, Timothy J; Tatem, Andrew J

    2013-01-01

    The expanding global air network provides rapid and wide-reaching connections accelerating both domestic and international travel. To understand human movement patterns on the network and their socioeconomic, environmental and epidemiological implications, information on passenger flow is required. However, comprehensive data on global passenger flow remain difficult and expensive to obtain, prompting researchers to rely on scheduled flight seat capacity data or simple models of flow. This study describes the construction of an open-access modeled passenger flow matrix for all airports with a host city-population of more than 100,000 and within two transfers of air travel from various publicly available air travel datasets. Data on network characteristics, city population, and local area GDP amongst others are utilized as covariates in a spatial interaction framework to predict the air transportation flows between airports. Training datasets based on information from various transportation organizations in the United States, Canada and the European Union were assembled. A log-linear model controlling the random effects on origin, destination and the airport hierarchy was then built to predict passenger flows on the network, and compared to the results produced using previously published models. Validation analyses showed that the model presented here produced improved predictive power and accuracy compared to previously published models, yielding the highest successful prediction rate at the global scale. Based on this model, passenger flows between 1,491 airports on 644,406 unique routes were estimated in the prediction dataset. The airport node characteristics and estimated passenger flows are freely available as part of the Vector-Borne Disease Airline Importation Risk (VBD-Air) project at: www.vbd-air.com/data.

  13. Role of plant MicroRNA in cross-species regulatory networks of humans.

    Science.gov (United States)

    Zhang, Hao; Li, Yanpu; Liu, Yuanning; Liu, Haiming; Wang, Hongyu; Jin, Wen; Zhang, Yanmei; Zhang, Chao; Xu, Dong

    2016-08-08

    It has been found that microRNAs (miRNAs) can function as a regulatory factor across species. For example, food-derived plant miRNAs may pass through the gastrointestinal (GI) tract, enter into the plasma and serum of mammals, and interact with endogenous RNAs to regulate their expression. Although this new type of regulatory mechanism is not well understood, it provides a fresh look at the relationship between food consumption and physiology. To investigate this new type of mechanism, we conducted a systematic computational study to analyze the potential functions of these dietary miRNAs in the human body. In this paper, we predicted human and plant target genes using RNAhybrid and set some criteria to further filter them. Then we built the cross-species regulatory network according to the filtered targets, extracted central nodes by PageRank algorithm and built core modules. We summarized the functions of these modules to three major categories: ion transport, metabolic process and stress response, and especially some target genes are highly related to ion transport, polysaccharides and the lipid metabolic process. Through functional analysis, we found that human and plants have similar functions such as ion transport and stress response, so our study also indicates the existence of a close link between exogenous plant miRNA targets and digestive/urinary organs. According to our analysis results, we suggest that the ingestion of these plant miRNAs may have a functional impact on consuming organisms in a cross-kingdom way, and the dietary habit may affect the physiological condition at a genetic level. Our findings may be useful for discovering cross-species regulatory mechanism in further study.

  14. Accurate identification of RNA editing sites from primitive sequence with deep neural networks.

    Science.gov (United States)

    Ouyang, Zhangyi; Liu, Feng; Zhao, Chenghui; Ren, Chao; An, Gaole; Mei, Chuan; Bo, Xiaochen; Shu, Wenjie

    2018-04-16

    RNA editing is a post-transcriptional RNA sequence alteration. Current methods have identified editing sites and facilitated research but require sufficient genomic annotations and prior-knowledge-based filtering steps, resulting in a cumbersome, time-consuming identification process. Moreover, these methods have limited generalizability and applicability in species with insufficient genomic annotations or in conditions of limited prior knowledge. We developed DeepRed, a deep learning-based method that identifies RNA editing from primitive RNA sequences without prior-knowledge-based filtering steps or genomic annotations. DeepRed achieved 98.1% and 97.9% area under the curve (AUC) in training and test sets, respectively. We further validated DeepRed using experimentally verified U87 cell RNA-seq data, achieving 97.9% positive predictive value (PPV). We demonstrated that DeepRed offers better prediction accuracy and computational efficiency than current methods with large-scale, mass RNA-seq data. We used DeepRed to assess the impact of multiple factors on editing identification with RNA-seq data from the Association of Biomolecular Resource Facilities and Sequencing Quality Control projects. We explored developmental RNA editing pattern changes during human early embryogenesis and evolutionary patterns in Drosophila species and the primate lineage using DeepRed. Our work illustrates DeepRed's state-of-the-art performance; it may decipher the hidden principles behind RNA editing, making editing detection convenient and effective.

  15. In-Silico Integration Approach to Identify a Key miRNA Regulating a Gene Network in Aggressive Prostate Cancer

    Science.gov (United States)

    Colaprico, Antonio; Bontempi, Gianluca; Castiglioni, Isabella

    2018-01-01

    Like other cancer diseases, prostate cancer (PC) is caused by the accumulation of genetic alterations in the cells that drives malignant growth. These alterations are revealed by gene profiling and copy number alteration (CNA) analysis. Moreover, recent evidence suggests that also microRNAs have an important role in PC development. Despite efforts to profile PC, the alterations (gene, CNA, and miRNA) and biological processes that correlate with disease development and progression remain partially elusive. Many gene signatures proposed as diagnostic or prognostic tools in cancer poorly overlap. The identification of co-expressed genes, that are functionally related, can identify a core network of genes associated with PC with a better reproducibility. By combining different approaches, including the integration of mRNA expression profiles, CNAs, and miRNA expression levels, we identified a gene signature of four genes overlapping with other published gene signatures and able to distinguish, in silico, high Gleason-scored PC from normal human tissue, which was further enriched to 19 genes by gene co-expression analysis. From the analysis of miRNAs possibly regulating this network, we found that hsa-miR-153 was highly connected to the genes in the network. Our results identify a four-gene signature with diagnostic and prognostic value in PC and suggest an interesting gene network that could play a key regulatory role in PC development and progression. Furthermore, hsa-miR-153, controlling this network, could be a potential biomarker for theranostics in high Gleason-scored PC. PMID:29562723

  16. Real-time Measurements of an Optical Reconfigurable Radio Access Unit for 5G Wireless Access Networks

    DEFF Research Database (Denmark)

    Rodríguez, Sebastián; Morales Vicente, Alvaro; Rommel, Simon

    2017-01-01

    A reconfigurable radio access unit able to switch wavelength, RF carrier frequency and optical path is experimentally demonstrated. The system is able to do the switching processes correctly, while achieving BER values below FEC limit.......A reconfigurable radio access unit able to switch wavelength, RF carrier frequency and optical path is experimentally demonstrated. The system is able to do the switching processes correctly, while achieving BER values below FEC limit....

  17. Analysis of the network capacities and possible congestion of the electricity transmission networks within the accession countries

    International Nuclear Information System (INIS)

    Kristiansen, Tarjei; Hewicker, Cristian

    2005-01-01

    Since the passage of the first Electricity Directive, the gradual establishment of the Internal Electricity Market (IEM) of the European Union has resulted in a remarkable growth of cross-border trade in electricity that have made trading and flow patterns more dynamic and less predictable. Simultaneously, market actors are increasingly facing congestion on several cross-border lines, limiting their opportunities to exploit the existing economic export and import potential between different markets to the benefit of European consumers. Ten new countries joined the European Union in May 2004 and thus became part of the IEM. In addition, Bulgaria, Romania and Turkey have been granted the status of Candidate Countries and may join the EU in the future. This paper describes a study commissioned by the European Commission (Directorate-General Energy and Transport) about the electricity market modelling of the these countries and their neighbour countries with respect to transmission congestion and investments. Our focus is on the following objectives: 1) Determining the economic export and import potential for the new parts of the Internal Electricity Market, covering exchanges between the Accession Countries, and between the Accession Countries and those countries that had already been part of the IEM before May 2004. 2) Developing a methodology for assessing transmission projects based on the market simulations and an assessment of investment costs. We have chosen to simulate market behaviour through a production simulation tool that allows us to determine the least-cost dispatch of power plants, while simultaneously taking account of limited cross-border capacities. Based on existing data and information and the expertise of our specialists, we have thus built a European market model in the well-known production simulation tool PROSYM. This tool is based on a minimum cost dispatch where the underlying power system is described with power plant characteristics and

  18. Integrative microRNA and proteomic approaches identify novel osteoarthritis genes and their collaborative metabolic and inflammatory networks.

    Directory of Open Access Journals (Sweden)

    Dimitrios Iliopoulos

    Full Text Available BACKGROUND: Osteoarthritis is a multifactorial disease characterized by destruction of the articular cartilage due to genetic, mechanical and environmental components affecting more than 100 million individuals all over the world. Despite the high prevalence of the disease, the absence of large-scale molecular studies limits our ability to understand the molecular pathobiology of osteoathritis and identify targets for drug development. METHODOLOGY/PRINCIPAL FINDINGS: In this study we integrated genetic, bioinformatic and proteomic approaches in order to identify new genes and their collaborative networks involved in osteoarthritis pathogenesis. MicroRNA profiling of patient-derived osteoarthritic cartilage in comparison to normal cartilage, revealed a 16 microRNA osteoarthritis gene signature. Using reverse-phase protein arrays in the same tissues we detected 76 differentially expressed proteins between osteoarthritic and normal chondrocytes. Proteins such as SOX11, FGF23, KLF6, WWOX and GDF15 not implicated previously in the genesis of osteoarthritis were identified. Integration of microRNA and proteomic data with microRNA gene-target prediction algorithms, generated a potential "interactome" network consisting of 11 microRNAs and 58 proteins linked by 414 potential functional associations. Comparison of the molecular and clinical data, revealed specific microRNAs (miR-22, miR-103 and proteins (PPARA, BMP7, IL1B to be highly correlated with Body Mass Index (BMI. Experimental validation revealed that miR-22 regulated PPARA and BMP7 expression and its inhibition blocked inflammatory and catabolic changes in osteoarthritic chondrocytes. CONCLUSIONS/SIGNIFICANCE: Our findings indicate that obesity and inflammation are related to osteoarthritis, a metabolic disease affected by microRNA deregulation. Gene network approaches provide new insights for elucidating the complexity of diseases such as osteoarthritis. The integration of microRNA, proteomic

  19. IQ imbalance tolerable parallel-channel DMT transmission for coherent optical OFDMA access network

    Science.gov (United States)

    Jung, Sang-Min; Mun, Kyoung-Hak; Jung, Sun-Young; Han, Sang-Kook

    2016-12-01

    Phase diversity of coherent optical communication provides spectrally efficient higher-order modulation for optical communications. However, in-phase/quadrature (IQ) imbalance in coherent optical communication degrades transmission performance by introducing unwanted signal distortions. In a coherent optical orthogonal frequency division multiple access (OFDMA) passive optical network (PON), IQ imbalance-induced signal distortions degrade transmission performance by interferences of mirror subcarriers, inter-symbol interference (ISI), and inter-channel interference (ICI). We propose parallel-channel discrete multitone (DMT) transmission to mitigate transceiver IQ imbalance-induced signal distortions in coherent orthogonal frequency division multiplexing (OFDM) transmissions. We experimentally demonstrate the effectiveness of parallel-channel DMT transmission compared with that of OFDM transmission in the presence of IQ imbalance.

  20. Network Based Educational Environment How Libraries and Librarians Become Organizers of Knowledge Access and Resources

    CERN Document Server

    Pettenati, M C; Pettenati, Corrado

    2000-01-01

    In this paper we will highlight some important issues which will influence the redefinition of roles and duties of libraries and librarians in a networked based educational environment. Although librarians will also keep their traditional roles of faculty support services as well as reference service and research assistance, we identify the participation in the instructional design process, the support in the evaluation, development and use of a proper authoring system and the customization of information access, as being the domains where libraries and librarians should mainly involve themselves in the next future and make profit of their expertise in information and knowledge organization in order to properly and effectively support the institutions in the use of Information Technology in education.

  1. A network collaboration implementing technology to improve medication dispensing and administration in critical access hospitals.

    Science.gov (United States)

    Wakefield, Douglas S; Ward, Marcia M; Loes, Jean L; O'Brien, John

    2010-01-01

    We report how seven independent critical access hospitals collaborated with a rural referral hospital to standardize workflow policies and procedures while jointly implementing the same health information technologies (HITs) to enhance medication care processes. The study hospitals implemented the same electronic health record, computerized provider order entry, pharmacy information systems, automated dispensing cabinets (ADC), and barcode medication administration systems. We conducted interviews and examined project documents to explore factors underlying the successful implementation of ADC and barcode medication administration across the network hospitals. These included a shared culture of collaboration; strategic sequencing of HIT component implementation; interface among HIT components; strategic placement of ADCs; disciplined use and sharing of workflow analyses linked with HIT applications; planning for workflow efficiencies; acquisition of adequate supply of HIT-related devices; and establishing metrics to monitor HIT use and outcomes.

  2. A New Prime Code for Synchronous Optical Code Division Multiple-Access Networks

    Directory of Open Access Journals (Sweden)

    Huda Saleh Abbas

    2018-01-01

    Full Text Available A new spreading code based on a prime code for synchronous optical code-division multiple-access networks that can be used in monitoring applications has been proposed. The new code is referred to as “extended grouped new modified prime code.” This new code has the ability to support more terminal devices than other prime codes. In addition, it patches subsequences with “0s” leading to lower power consumption. The proposed code has an improved cross-correlation resulting in enhanced BER performance. The code construction and parameters are provided. The operating performance, using incoherent on-off keying modulation and incoherent pulse position modulation systems, has been analyzed. The performance of the code was compared with other prime codes. The results demonstrate an improved performance, and a BER floor of 10−9 was achieved.

  3. Constructing a two bands optical code-division multiple-access network of bipolar optical access codecs using Walsh-coded liquid crystal modulators

    Science.gov (United States)

    Yen, Chih-Ta; Huang, Jen-Fa; Chih, Ping-En

    2014-08-01

    We propose and experimentally demonstrated the two bands optical code-division multiple-access (OCDMA) network over bipolar Walsh-coded liquid-crystal modulators (LCMs) and driven by green light and red light lasers. Achieving system performance depends on the construction of a decoder that implements a true bipolar correlation using only unipolar signals and intensity detection for each band. We took advantage of the phase delay characteristics of LCMs to construct a prototype optical coder/decoder (codec). Matched and unmatched Walsh signature codes were evaluated to detect correlations among multiuser data in the access network. By using LCMs, a red and green laser light source was spectrally encoded and the summed light dots were complementary decoded. Favorable contrast on auto- and cross-correlations indicates that binary information symbols can be properly recovered using a balanced photodetector.

  4. A CoAP-Based Network Access Authentication Service for Low-Power Wide Area Networks: LO-CoAP-EAP

    Directory of Open Access Journals (Sweden)

    Dan Garcia-Carrillo

    2017-11-01

    Full Text Available The Internet-of-Things (IoT landscape is expanding with new radio technologies. In addition to the Low-Rate Wireless Personal Area Network (LR-WPAN, the recent set of technologies conforming the so-called Low-Power Wide Area Networks (LP-WAN offers long-range communications, allowing one to send small pieces of information at a reduced energy cost, which promotes the creation of new IoT applications and services. However, LP-WAN technologies pose new challenges since they have strong limitations in the available bandwidth. In general, a first step prior to a smart object being able to gain access to the network is the process of network access authentication. It involves authentication, authorization and key management operations. This process is of vital importance for operators to control network resources. However, proposals for managing network access authentication in LP-WAN are tailored to the specifics of each technology, which could introduce interoperability problems in the future. In this sense, little effort has been put so far into providing a wireless-independent solution for network access authentication in the area of LP-WAN. To fill this gap, we propose a service named Low-Overhead CoAP-EAP (LO-CoAP-EAP, which is based on previous work designed for LR-WPAN. LO-CoAP-EAP integrates the use of Authentication, Authorization and Accounting (AAA infrastructures and the Extensible Authentication Protocol (EAP protocol. For this integration, we use the Constrained Application Protocol (CoAP to design a network authentication service independent of the type of LP-WAN technology. LO-CoAP-EAP represents a trade-off between flexibility, wireless technology independence, scalability and performance in LP-WAN.

  5. A CoAP-Based Network Access Authentication Service for Low-Power Wide Area Networks: LO-CoAP-EAP.

    Science.gov (United States)

    Garcia-Carrillo, Dan; Marin-Lopez, Rafael; Kandasamy, Arunprabhu; Pelov, Alexander

    2017-11-17

    The Internet-of-Things (IoT) landscape is expanding with new radio technologies. In addition to the Low-Rate Wireless Personal Area Network (LR-WPAN), the recent set of technologies conforming the so-called Low-Power Wide Area Networks (LP-WAN) offers long-range communications, allowing one to send small pieces of information at a reduced energy cost, which promotes the creation of new IoT applications and services. However, LP-WAN technologies pose new challenges since they have strong limitations in the available bandwidth. In general, a first step prior to a smart object being able to gain access to the network is the process of network access authentication. It involves authentication, authorization and key management operations. This process is of vital importance for operators to control network resources. However, proposals for managing network access authentication in LP-WAN are tailored to the specifics of each technology, which could introduce interoperability problems in the future. In this sense, little effort has been put so far into providing a wireless-independent solution for network access authentication in the area of LP-WAN. To fill this gap, we propose a service named Low-Overhead CoAP-EAP (LO-CoAP-EAP), which is based on previous work designed for LR-WPAN. LO-CoAP-EAP integrates the use of Authentication, Authorization and Accounting (AAA) infrastructures and the Extensible Authentication Protocol (EAP) protocol. For this integration, we use the Constrained Application Protocol (CoAP) to design a network authentication service independent of the type of LP-WAN technology. LO-CoAP-EAP represents a trade-off between flexibility, wireless technology independence, scalability and performance in LP-WAN.

  6. Energy Efficiency in TDMA-Based Next-Generation Passive Optical Access Networks

    KAUST Repository

    Dhaini, Ahmad R.; Ho, Pin-Han; Shen, Gangxiang; Shihada, Basem

    2014-01-01

    Next-generation passive optical network (PON) has been considered in the past few years as a cost-effective broadband access technology. With the ever-increasing power saving concern, energy efficiency has been an important issue in its operations. In this paper, we propose a novel sleep-time sizing and scheduling framework for the implementation of green bandwidth allocation (GBA) in TDMA-PONs. The proposed framework leverages the batch-mode transmission feature of GBA to minimize the overhead due to frequent ONU on-off transitions. The optimal sleeping time sequence of each ONU is determined in every cycle without violating the maximum delay requirement. With multiple ONUs possibly accessing the shared media simultaneously, a collision may occur. To address this problem, we propose a new sleep-time sizing mechanism, namely Sort-And-Shift (SAS), in which the ONUs are sorted according to their expected transmission start times, and their sleep times are shifted to resolve any possible collision while ensuring maximum energy saving. Results show the effectiveness of the proposed framework and highlight the merits of our solutions.

  7. Low-complexity co-tier interference reduction scheme in open-access overlaid cellular networks

    KAUST Repository

    Radaydeh, Redha Mahmoud Mesleh

    2011-12-01

    This paper addresses the effect of co-tier interference on the performance of multiuser overlaid cellular networks that share the same available resources. It assumed that each macrocell contains a number of self-configurable and randomly located femtocells that employ the open-access control strategy to reduce the effect of cross-tier interference. It is also assumed that the desired user equipment (UE) can access only one of the available channels, maintains simple decoding circuitry with single receive antenna, and has limited knowledge of the instantaneous channel state information (CSI) due to resource limitation. To mitigate the effect of co-tier interference in the absence of the CSI of the desired UE, a low-complexity switched-based scheme for single channel selection based on the predicted interference levels associated with available channels is proposed for the case of over-loaded channels. Through the analysis, new general formulation for the statistics of the resulting instantaneous interference power and some performance measures are presented. The effect of the switching threshold on the efficiency and performance of the proposed scheme is studied. Numerical and simulation results to clarify the usefulness of the proposed scheme in reducing the impact of co-tier interference are also provided. © 2011 IEEE.

  8. MAC-Layer Active Dropping for Real-Time Video Streaming in 4G Access Networks

    KAUST Repository

    She, James

    2010-12-01

    This paper introduces a MAC-layer active dropping scheme to achieve effective resource utilization, which can satisfy the application-layer delay for real-time video streaming in time division multiple access based 4G broadband wireless access networks. When a video frame is not likely to be reconstructed within the application-layer delay bound at a receiver for the minimum decoding requirement, the MAC-layer protocol data units of such video frame will be proactively dropped before the transmission. An analytical model is developed to evaluate how confident a video frame can be delivered within its application-layer delay bound by jointly considering the effects of time-varying wireless channel, minimum decoding requirement of each video frame, data retransmission, and playback buffer. Extensive simulations with video traces are conducted to prove the effectiveness of the proposed scheme. When compared to conventional cross-layer schemes using prioritized-transmission/retransmission, the proposed scheme is practically implementable for more effective resource utilization, avoiding delay propagation, and achieving better video qualities under certain conditions.

  9. Directional Medium Access Control (MAC Protocols in Wireless Ad Hoc and Sensor Networks: A Survey

    Directory of Open Access Journals (Sweden)

    David Tung Chong Wong

    2015-06-01

    Full Text Available This survey paper presents the state-of-the-art directional medium access control (MAC protocols in wireless ad hoc and sensor networks (WAHSNs. The key benefits of directional antennas over omni-directional antennas are longer communication range, less multipath interference, more spatial reuse, more secure communications, higher throughput and reduced latency. However, directional antennas lead to single-/multi-channel directional hidden/exposed terminals, deafness and neighborhood, head-of-line blocking, and MAC-layer capture which need to be overcome. Addressing these problems and benefits for directional antennas to MAC protocols leads to many classes of directional MAC protocols in WAHSNs. These classes of directional MAC protocols presented in this survey paper include single-channel, multi-channel, cooperative and cognitive directional MACs. Single-channel directional MAC protocols can be classified as contention-based or non-contention-based or hybrid-based, while multi-channel directional MAC protocols commonly use a common control channel for control packets/tones and one or more data channels for directional data transmissions. Cooperative directional MAC protocols improve throughput in WAHSNs via directional multi-rate/single-relay/multiple-relay/two frequency channels/polarization, while cognitive directional MAC protocols leverage on conventional directional MAC protocols with new twists to address dynamic spectrum access. All of these directional MAC protocols are the pillars for the design of future directional MAC protocols in WAHSNs.

  10. A Fair Contention Access Scheme for Low-Priority Traffic in Wireless Body Area Networks

    Directory of Open Access Journals (Sweden)

    Shagufta Henna

    2017-08-01

    Full Text Available Recently, wireless body area networks (WBANs have attracted significant consideration in ubiquitous healthcare. A number of medium access control (MAC protocols, primarily derived from the superframe structure of the IEEE 802.15.4, have been proposed in literature. These MAC protocols aim to provide quality of service (QoS by prioritizing different traffic types in WBANs. A contention access period (CAPwith high contention in priority-based MAC protocols can result in higher number of collisions and retransmissions. During CAP, traffic classes with higher priority are dominant over low-priority traffic; this has led to starvation of low-priority traffic, thus adversely affecting WBAN throughput, delay, and energy consumption. Hence, this paper proposes a traffic-adaptive priority-based superframe structure that is able to reduce contention in the CAP period, and provides a fair chance for low-priority traffic. Simulation results in ns-3 demonstrate that the proposed MAC protocol, called traffic- adaptive priority-based MAC (TAP-MAC, achieves low energy consumption, high throughput, and low latency compared to the IEEE 802.15.4 standard, and the most recent priority-based MAC protocol, called priority-based MAC protocol (PA-MAC.

  11. Broadband and scalable mobile satellite communication system for future access networks

    Science.gov (United States)

    Ohata, Kohei; Kobayashi, Kiyoshi; Nakahira, Katsuya; Ueba, Masazumi

    2005-07-01

    Due to the recent market trends, NTT has begun research into next generation satellite communication systems, such as broadband and scalable mobile communication systems. One service application objective is to provide broadband Internet access for transportation systems, temporal broadband access networks and telemetries to remote areas. While these are niche markets the total amount of capacity should be significant. We set a 1-Gb/s total transmission capacity as our goal. Our key concern is the system cost, which means that the system should be unified system with diversified services and not tailored for each application. As satellites account for a large portion of the total system cost, we set the target satellite size as a small, one-ton class dry mass with a 2-kW class payload power. In addition to the payload power and weight, the mobile satellite's frequency band is extremely limited. Therefore, we need to develop innovative technologies that will reduce the weight and maximize spectrum and power efficiency. Another challenge is the need for the system to handle up to 50 dB and a wide data rate range of other applications. This paper describes the key communication system technologies; the frequency reuse strategy, multiplexing scheme, resource allocation scheme, and QoS management algorithm to ensure excellent spectrum efficiency and support a variety of services and quality requirements in the mobile environment.

  12. Decentralized Opportunistic Spectrum Resources Access Model and Algorithm toward Cooperative Ad-Hoc Networks

    Science.gov (United States)

    Liu, Ming; Xu, Yang; Mohammed, Abdul-Wahid

    2016-01-01

    Limited communication resources have gradually become a critical factor toward efficiency of decentralized large scale multi-agent coordination when both system scales up and tasks become more complex. In current researches, due to the agent’s limited communication and observational capability, an agent in a decentralized setting can only choose a part of channels to access, but cannot perceive or share global information. Each agent’s cooperative decision is based on the partial observation of the system state, and as such, uncertainty in the communication network is unavoidable. In this situation, it is a major challenge working out cooperative decision-making under uncertainty with only a partial observation of the environment. In this paper, we propose a decentralized approach that allows agents cooperatively search and independently choose channels. The key to our design is to build an up-to-date observation for each agent’s view so that a local decision model is achievable in a large scale team coordination. We simplify the Dec-POMDP model problem, and each agent can jointly work out its communication policy in order to improve its local decision utilities for the choice of communication resources. Finally, we discuss an implicate resource competition game, and show that, there exists an approximate resources access tradeoff balance between agents. Based on this discovery, the tradeoff between real-time decision-making and the efficiency of cooperation using these channels can be well improved. PMID:26727504

  13. Decentralized Opportunistic Spectrum Resources Access Model and Algorithm toward Cooperative Ad-Hoc Networks.

    Directory of Open Access Journals (Sweden)

    Ming Liu

    Full Text Available Limited communication resources have gradually become a critical factor toward efficiency of decentralized large scale multi-agent coordination when both system scales up and tasks become more complex. In current researches, due to the agent's limited communication and observational capability, an agent in a decentralized setting can only choose a part of channels to access, but cannot perceive or share global information. Each agent's cooperative decision is based on the partial observation of the system state, and as such, uncertainty in the communication network is unavoidable. In this situation, it is a major challenge working out cooperative decision-making under uncertainty with only a partial observation of the environment. In this paper, we propose a decentralized approach that allows agents cooperatively search and independently choose channels. The key to our design is to build an up-to-date observation for each agent's view so that a local decision model is achievable in a large scale team coordination. We simplify the Dec-POMDP model problem, and each agent can jointly work out its communication policy in order to improve its local decision utilities for the choice of communication resources. Finally, we discuss an implicate resource competition game, and show that, there exists an approximate resources access tradeoff balance between agents. Based on this discovery, the tradeoff between real-time decision-making and the efficiency of cooperation using these channels can be well improved.

  14. Energy Efficiency in TDMA-Based Next-Generation Passive Optical Access Networks

    KAUST Repository

    Dhaini, Ahmad R.

    2014-06-01

    Next-generation passive optical network (PON) has been considered in the past few years as a cost-effective broadband access technology. With the ever-increasing power saving concern, energy efficiency has been an important issue in its operations. In this paper, we propose a novel sleep-time sizing and scheduling framework for the implementation of green bandwidth allocation (GBA) in TDMA-PONs. The proposed framework leverages the batch-mode transmission feature of GBA to minimize the overhead due to frequent ONU on-off transitions. The optimal sleeping time sequence of each ONU is determined in every cycle without violating the maximum delay requirement. With multiple ONUs possibly accessing the shared media simultaneously, a collision may occur. To address this problem, we propose a new sleep-time sizing mechanism, namely Sort-And-Shift (SAS), in which the ONUs are sorted according to their expected transmission start times, and their sleep times are shifted to resolve any possible collision while ensuring maximum energy saving. Results show the effectiveness of the proposed framework and highlight the merits of our solutions.

  15. The role of a bus network in access to primary health care in Metropolitan Auckland, New Zealand.

    Science.gov (United States)

    Rocha, C M; McGuire, S; Whyman, R; Kruger, E; Tennant, M

    2015-09-01

    Background: This study examined the spatial accessibility of the population of metropolitan Auckland, New Zealand to the bus network, to connect them to primary health providers, in this case doctors (GP) and dentists. Analysis of accessibility by ethnic identity and socio-economic status were also carried out, because of existing health inequalities along these dimensions. The underlying hypothesis was that most people would live within easy reach of primary health providers, or easy bus transport to such providers. An integrated geographic model of bus transport routes and stops, with population and primary health providers (medical. and dental practices) was developed and analysed. Although the network of buses in metropolitan Auckland is substantial and robust it was evident that many people live more than 150 metres from a stop. Improving the access to bus stops, particularly in areas of high primary health care need (doctors and dentists), would certainly be an opportunity to enhance spatial access in a growing metropolitan area.

  16. The Impact of Mobile Offloading on Energy Consumption and Capacity of Radio Access Networks – Case of Finland

    Directory of Open Access Journals (Sweden)

    Michail Katsigiannis

    2015-08-01

    Full Text Available The Finnish Mobile Operators face two main challenges: (i mobile data subscriptions penetration and traffic are experiencing rapid growth; and (ii government intervenes in the market to attain contradictory goals related to extensive high-speed mobile networks and energy consumption reduction. The mobile operators have to increase the capacity in their networks, taking energy efficiency into account. The reduction of energy consumption in mobile networks results to the reducing carbon emissions, and possibly to cost savings. The purpose of this study is to investigate the wide-to-local area offloading in urban regions in Finland and examine the impact of such a network on the wide area access network in terms of energy and capacity. The results show that the capacity relief ranges from 9.7 to 38.7 %, depending on the penetration of local area service, but the energy savings in macro cellular network are negligible.

  17. Access to emergency care services: a transversal ecological study about Brazilian emergency health care network.

    Science.gov (United States)

    Rocha, T A H; da Silva, N C; Amaral, P V; Barbosa, A C Q; Rocha, J V M; Alvares, V; de Almeida, D G; Thumé, E; Thomaz, E B A F; de Sousa Queiroz, R C; de Souza, M R; Lein, A; Toomey, N; Staton, C A; Vissoci, J R N; Facchini, L A

    2017-12-01

    Studies of health geography are important in the planning and allocation of emergency health services. The geographical distribution of health facilities is an important factor in timely and quality access to emergency services; therefore, the present study analyzed the emergency health care network in Brazil, focusing the analysis at the roles of small hospitals (SHs). Cross-sectional ecological study. Data were collected from 9429 hospitals of which 3524 were SHs and 5905 were high-complexity centers (HCCs). For analytical purposes, we considered four specialties when examining the proxies of emergency care capability: adult, pediatrics, neonatal, and obstetric. We analyzed the spatial distribution of hospitals, identifying municipalities that rely exclusively on SHs and the distance of these cities from HCCs. More than 14 and 30 million people were at least 120 km away from HCCs with an adult intensive care unit (ICU) and pediatric ICU, respectively. For neonatal care distribution, 12% of the population was more than 120 km away from a health facility with a neonatal ICU. The maternities situation is different from other specialties, where 81% of the total Brazilian population was within 1 h or less from such health facilities. Our results highlighted a polarization in distribution of Brazilian health care facilities. There is a concentration of hospitals in urban areas more developed and access gaps in rural areas and the Amazon region. Our results demonstrate that the distribution of emergency services in Brazil is not facilitating access to the population due to geographical barriers associated with great distances. Copyright © 2017 The Royal Society for Public Health. Published by Elsevier Ltd. All rights reserved.

  18. Allocation and management issues in multiple-transaction open access transmission networks

    Science.gov (United States)

    Tao, Shu

    This thesis focuses on some key issues related to allocation and management by the independent grid operator (IGO) of unbundled services in multiple-transaction open access transmission networks. The three unbundled services addressed in the thesis are transmission real power losses, reactive power support requirements from generation sources, and transmission congestion management. We develop the general framework that explicitly represents multiple transactions undertaken simultaneously in the transmission grid. This framework serves as the basis for formulating various problems treated in the thesis. We use this comprehensive framework to develop a physical-flow-based mechanism to allocate the total transmission losses to each transaction using the system. An important property of the allocation scheme is its capability to effectively deal with counter flows that result in the presence of specific transactions. Using the loss allocation results as the basis, we construct the equivalent loss compensation concept and apply it to develop flexible and effective procedures for compensating losses in multiple-transaction networks. We present a new physical-flow-based mechanism for allocating the reactive power support requirements provided by generators in multiple-transaction networks. The allocatable reactive support requirements are formulated as the sum of two specific components---the voltage magnitude variation component and the voltage angle variation component. The formulation utilizes the multiple-transaction framework and makes use of certain simplifying approximations. The formulation leads to a natural allocation as a function of the amount of each transaction. The physical interpretation of each allocation as a sensitivity of the reactive output of a generator is discussed. We propose a congestion management allocation scheme for multiple-transaction networks. The proposed scheme determines the allocation of congestion among the transactions on a physical

  19. Coordinated Scheduling and Power Control in Cloud-Radio Access Networks

    KAUST Repository

    Douik, Ahmed; Dahrouj, Hayssam; Al-Naffouri, Tareq Y.; Alouini, Mohamed-Slim

    2015-01-01

    This paper addresses the joint coordinated scheduling and power control problem in cloud-enabled networks. Consider the downlink of a cloud-radio access network (CRAN), where the cloud is only responsible for the scheduling policy, power control, and synchronization of the transmit frames across the single-antenna base-stations (BS). The transmit frame consists of several time/frequency blocks, called power-zones (PZ). The paper considers the problem of scheduling users to PZs and determining their power levels (PL), by maximizing the weighted sum-rate under the practical constraints that each user cannot be served by more than one base-station, but can be served by one or more power-zones within each base-station frame. The paper solves the problem using a graph theoretical approach by introducing the joint scheduling and power control graph formed by several clusters, where each is formed by a set of vertices, representing the possible association of users, BSs, and PLs for one specific PZ. The problem is, then, formulated as a maximumweight clique problem, in which the weight of each vertex is the sum of the benefits of the individual associations belonging to that vertex. Simulation results suggest that the proposed crosslayer scheme provides appreciable performance improvement as compared to schemes from recent literature.

  20. Coordinated Scheduling and Power Control in Cloud-Radio Access Networks

    KAUST Repository

    Douik, Ahmed

    2015-12-01

    This paper addresses the joint coordinated scheduling and power control problem in cloud-enabled networks. Consider the downlink of a cloud-radio access network (CRAN), where the cloud is only responsible for the scheduling policy, power control, and synchronization of the transmit frames across the single-antenna base-stations (BS). The transmit frame consists of several time/frequency blocks, called power-zones (PZ). The paper considers the problem of scheduling users to PZs and determining their power levels (PL), by maximizing the weighted sum-rate under the practical constraints that each user cannot be served by more than one base-station, but can be served by one or more power-zones within each base-station frame. The paper solves the problem using a graph theoretical approach by introducing the joint scheduling and power control graph formed by several clusters, where each is formed by a set of vertices, representing the possible association of users, BSs, and PLs for one specific PZ. The problem is, then, formulated as a maximumweight clique problem, in which the weight of each vertex is the sum of the benefits of the individual associations belonging to that vertex. Simulation results suggest that the proposed crosslayer scheme provides appreciable performance improvement as compared to schemes from recent literature.

  1. Performance Analysis of OCDMA Based on AND Detection in FTTH Access Network Using PIN & APD Photodiodes

    Science.gov (United States)

    Aldouri, Muthana; Aljunid, S. A.; Ahmad, R. Badlishah; Fadhil, Hilal A.

    2011-06-01

    In order to comprise between PIN photo detector and avalanche photodiodes in a system used double weight (DW) code to be a performance of the optical spectrum CDMA in FTTH network with point-to-multi-point (P2MP) application. The performance of PIN against APD is compared through simulation by using opt system software version 7. In this paper we used two networks designed as follows one used PIN photo detector and the second using APD photo diode, both two system using with and without erbium doped fiber amplifier (EDFA). It is found that APD photo diode in this system is better than PIN photo detector for all simulation results. The conversion used a Mach-Zehnder interferometer (MZI) wavelength converter. Also we are study, the proposing a detection scheme known as AND subtraction detection technique implemented with fiber Bragg Grating (FBG) act as encoder and decoder. This FBG is used to encode and decode the spectral amplitude coding namely double weight (DW) code in Optical Code Division Multiple Access (OCDMA). The performances are characterized through bit error rate (BER) and bit rate (BR) also the received power at various bit rate.

  2. A scalable and continuous-upgradable optical wireless and wired convergent access network.

    Science.gov (United States)

    Sung, J Y; Cheng, K T; Chow, C W; Yeh, C H; Pan, C-L

    2014-06-02

    In this work, a scalable and continuous upgradable convergent optical access network is proposed. By using a multi-wavelength coherent comb source and a programmable waveshaper at the central office (CO), optical millimeter-wave (mm-wave) signals of different frequencies (from baseband to > 100 GHz) can be generated. Hence, it provides a scalable and continuous upgradable solution for end-user who needs 60 GHz wireless services now and > 100 GHz wireless services in the future. During the upgrade, user only needs to upgrade their optical networking unit (ONU). A programmable waveshaper is used to select the suitable optical tones with wavelength separation equals to the desired mm-wave frequency; while the CO remains intact. The centralized characteristics of the proposed system can easily add any new service and end-user. The centralized control of the wavelength makes the system more stable. Wired data rate of 17.45 Gb/s and w-band wireless data rate up to 3.36 Gb/s were demonstrated after transmission over 40 km of single-mode fiber (SMF).

  3. A ground-base Radar network to access the 3D structure of MLT winds

    Science.gov (United States)

    Stober, G.; Chau, J. L.; Wilhelm, S.; Jacobi, C.

    2016-12-01

    The mesosphere/lower thermosphere (MLT) is a highly variable atmospheric region driven by wave dynamics at various scales including planetary waves, tides and gravity waves. Some of these propagate through the MLT into the thermosphere/ionosphere carrying energy and momentum from the middle atmosphere into the upper atmosphere. To improve our understanding of the wave energetics and momentum transfer during their dissipation it is essential to characterize their space time properties. During the last two years we developed a new experimental approach to access the horizontal structure of wind fields at the MLT using a meteor radar network in Germany, which we called MMARIA - Multi-static Multi-frequency Agile Radar for Investigation of the Atmosphere. The network combines classical backscatter meteor radars and passive forward scatter radio links. We present our preliminary results using up to 7 different active and passive radio links to obtain horizontally resolved wind fields applying a statistical inverse method. The wind fields are retrieved with 15-30 minutes temporal resolution on a grid with 30x30 km horizontal spacing. Depending on the number of observed meteors, we are able to apply the wind field inversion at heights between 84-94 km. The horizontally resolved wind fields provide insights of the typical horizontal gravity wave length and the energy cascade from large scales to small scales. We present first power spectra indicating the transition from the synoptic wave scale to the gravity wave scale.

  4. Strategies for P2P connectivity in reconfigurable converged wired/wireless access networks.

    Science.gov (United States)

    Puerto, Gustavo; Mora, José; Ortega, Beatriz; Capmany, José

    2010-12-06

    This paper presents different strategies to define the architecture of a Radio-Over-Fiber (RoF) Access networks enabling Peer-to-Peer (P2P) functionalities. The architectures fully exploit the flexibility of a wavelength router based on the feedback configuration of an Arrayed Waveguide Grating (AWG) and an optical switch to broadcast P2P services among diverse infrastructures featuring dynamic channel allocation and enabling an optical platform for 3G and beyond wireless backhaul requirements. The first architecture incorporates a tunable laser to generate a dedicated wavelength for P2P purposes and the second architecture takes advantage of reused wavelengths to enable the P2P connectivity among Optical Network Units (ONUs) or Base Stations (BS). While these two approaches allow the P2P connectivity in a one at a time basis (1:1), the third architecture enables the broadcasting of P2P sessions among different ONUs or BSs at the same time (1:M). Experimental assessment of the proposed architecture shows approximately 0.6% Error Vector Magnitude (EVM) degradation for wireless services and 1 dB penalty in average for 1 x 10(-12) Bit Error Rate (BER) for wired baseband services.

  5. Low-Complexity Scheduling and Power Adaptation for Coordinated Cloud-Radio Access Networks

    KAUST Repository

    Douik, Ahmed

    2017-07-17

    In practical wireless systems, the successful implementation of resource allocation techniques strongly depends on the algorithmic complexity. Consider a cloud-radio access network (CRAN), where the central cloud is responsible for scheduling devices to the frames’ radio resources blocks (RRBs) of the single-antenna base-stations (BSs), adjusting the transmit power levels, and for synchronizing the transmit frames across the connected BSs. Previous studies show that the jointly coordinated scheduling and power control problem in the considered CRAN can be solved using an approach that scales exponentially with the number of BSs, devices, and RRBs, which makes the practical implementation infeasible for reasonably sized networks. This paper instead proposes a low-complexity solution to the problem, under the constraints that each device cannot be served by more than one BS but can be served by multiple RRBs within each BS frame, and under the practical assumption that the channel is constant during the duration of each frame. The paper utilizes graph-theoretical based techniques and shows that constructing a single power control graph is sufficient to obtain the optimal solution with a complexity that is independent of the number of RRBs. Simulation results reveal the optimality of the proposed solution for slow-varying channels, and show that the solution performs near-optimal for highly correlated channels.

  6. Integrating microRNA and mRNA expression profiles of neuronal progenitors to identify regulatory networks underlying the onset of cortical neurogenesis

    Directory of Open Access Journals (Sweden)

    Barker Jeffery L

    2009-08-01

    Full Text Available Abstract Background Cortical development is a complex process that includes sequential generation of neuronal progenitors, which proliferate and migrate to form the stratified layers of the developing cortex. To identify the individual microRNAs (miRNAs and mRNAs that may regulate the genetic network guiding the earliest phase of cortical development, the expression profiles of rat neuronal progenitors obtained at embryonic day 11 (E11, E12 and E13 were analyzed. Results Neuronal progenitors were purified from telencephalic dissociates by a positive-selection strategy featuring surface labeling with tetanus-toxin and cholera-toxin followed by fluorescence-activated cell sorting. Microarray analyses revealed the fractions of miRNAs and mRNAs that were up-regulated or down-regulated in these neuronal progenitors at the beginning of cortical development. Nearly half of the dynamically expressed miRNAs were negatively correlated with the expression of their predicted target mRNAs. Conclusion These data support a regulatory role for miRNAs during the transition from neuronal progenitors into the earliest differentiating cortical neurons. In addition, by supplying a robust data set in which miRNA and mRNA profiles originate from the same purified cell type, this empirical study may facilitate the development of new algorithms to integrate various "-omics" data sets.

  7. Variable disparity estimation based intermediate view reconstruction in dynamic flow allocation over EPON-based access networks

    Science.gov (United States)

    Bae, Kyung-Hoon; Lee, Jungjoon; Kim, Eun-Soo

    2008-06-01

    In this paper, a variable disparity estimation (VDE)-based intermediate view reconstruction (IVR) in dynamic flow allocation (DFA) over an Ethernet passive optical network (EPON)-based access network is proposed. In the proposed system, the stereoscopic images are estimated by a variable block-matching algorithm (VBMA), and they are transmitted to the receiver through DFA over EPON. This scheme improves a priority-based access network by converting it to a flow-based access network with a new access mechanism and scheduling algorithm, and then 16-view images are synthesized by the IVR using VDE. Some experimental results indicate that the proposed system improves the peak-signal-to-noise ratio (PSNR) to as high as 4.86 dB and reduces the processing time to 3.52 s. Additionally, the network service provider can provide upper limits of transmission delays by the flow. The modeling and simulation results, including mathematical analyses, from this scheme are also provided.

  8. Adaptive Code Division Multiple Access Protocol for Wireless Network-on-Chip Architectures

    Science.gov (United States)

    Vijayakumaran, Vineeth

    Massive levels of integration following Moore's Law ushered in a paradigm shift in the way on-chip interconnections were designed. With higher and higher number of cores on the same die traditional bus based interconnections are no longer a scalable communication infrastructure. On-chip networks were proposed enabled a scalable plug-and-play mechanism for interconnecting hundreds of cores on the same chip. Wired interconnects between the cores in a traditional Network-on-Chip (NoC) system, becomes a bottleneck with increase in the number of cores thereby increasing the latency and energy to transmit signals over them. Hence, there has been many alternative emerging interconnect technologies proposed, namely, 3D, photonic and multi-band RF interconnects. Although they provide better connectivity, higher speed and higher bandwidth compared to wired interconnects; they also face challenges with heat dissipation and manufacturing difficulties. On-chip wireless interconnects is one other alternative proposed which doesn't need physical interconnection layout as data travels over the wireless medium. They are integrated into a hybrid NOC architecture consisting of both wired and wireless links, which provides higher bandwidth, lower latency, lesser area overhead and reduced energy dissipation in communication. However, as the bandwidth of the wireless channels is limited, an efficient media access control (MAC) scheme is required to enhance the utilization of the available bandwidth. This thesis proposes using a multiple access mechanism such as Code Division Multiple Access (CDMA) to enable multiple transmitter-receiver pairs to send data over the wireless channel simultaneously. It will be shown that such a hybrid wireless NoC with an efficient CDMA based MAC protocol can significantly increase the performance of the system while lowering the energy dissipation in data transfer. In this work it is shown that the wireless NoC with the proposed CDMA based MAC protocol

  9. Louisiana coastal GIS network: Graphical user interface for access to spatial data

    Science.gov (United States)

    Hiland, Matteson; McBride, Randolph A.; Davis, Donald; Braud, Dewitt; Streiffer, Henry; Jones, Farrell; Lewis, Anthony; Williams, S.

    1991-01-01

    Louisiana's coastal wetlands support a large percentage of the nation's seafood and fur industries, vast deposits of oil and natural gas, habitat for thousands of species of plants and animals, winter nesting grounds and migratory paths for numerous waterfowl, and many recreational resources enjoyed by residents and tourists. Louisiana's wetlands also have the highest rates of coastal erosion and wetland loss in the nation. While numerous studies across many disciplines have been conducted on both local and regional scales, no complete inventory exists for this information. The Louisiana Coastal Geographic Information System Network (LCGISN) is currently being developed to facilitate access to existing data for coastal zone planners, managers, and researchers. The Louisiana Geological Survey (LGS), in cooperation with the LSU Department of Geography and Anthropology, the Computer Aided Design and Geographic Information Systems Research Laboratory (CADGIS), and others, is pursuing this project under the terms of a cooperative agreement with the U.S. Geological Survey. LCGISN is an automated system for searching and retrieving geographic, cartographic, and bibliographic data. By linking original programming with an existing GIS software package and an industry standard relational database management system, LCGISN will provide the capability for users to search for data references by interactively defining the area of interest on a displayed map/image reference background. Several agencies will be networked to provide easy access to a wide variety of information. LCGISN, with its headquarters at LGS, will serve as the central node on the network, providing data format conversions, projection and datum transformations, and storage of several of the most commonly used data sets. Thematic mapper data, USGS 7.5-minute quadrangle map boundaries, political and legal boundaries, major transportation routes, and other digital data will provide a base map to aid the user in

  10. Soft computing model for optimized siRNA design by identifying off target possibilities using artificial neural network model.

    Science.gov (United States)

    Murali, Reena; John, Philips George; Peter S, David

    2015-05-15

    The ability of small interfering RNA (siRNA) to do posttranscriptional gene regulation by knocking down targeted genes is an important research topic in functional genomics, biomedical research and in cancer therapeutics. Many tools had been developed to design exogenous siRNA with high experimental inhibition. Even though considerable amount of work has been done in designing exogenous siRNA, design of effective siRNA sequences is still a challenging work because the target mRNAs must be selected such that their corresponding siRNAs are likely to be efficient against that target and unlikely to accidentally silence other transcripts due to sequence similarity. In some cases, siRNAs may tolerate mismatches with the target mRNA, but knockdown of genes other than the intended target could make serious consequences. Hence to design siRNAs, two important concepts must be considered: the ability in knocking down target genes and the off target possibility on any nontarget genes. So before doing gene silencing by siRNAs, it is essential to analyze their off target effects in addition to their inhibition efficacy against a particular target. Only a few methods have been developed by considering both efficacy and off target possibility of siRNA against a gene. In this paper we present a new design of neural network model with whole stacking energy (ΔG) that enables to identify the efficacy and off target effect of siRNAs against target genes. The tool lists all siRNAs against a particular target with their inhibition efficacy and number of matches or sequence similarity with other genes in the database. We could achieve an excellent performance of Pearson Correlation Coefficient (R=0. 74) and Area Under Curve (AUC=0.906) when the threshold of whole stacking energy is ≥-34.6 kcal/mol. To the best of the author's knowledge, this is one of the best score while considering the "combined efficacy and off target possibility" of siRNA for silencing a gene. The proposed model

  11. Cost- and reliability-oriented aggregation point association in long-term evolution and passive optical network hybrid access infrastructure for smart grid neighborhood area network

    Science.gov (United States)

    Cheng, Xiao; Feng, Lei; Zhou, Fanqin; Wei, Lei; Yu, Peng; Li, Wenjing

    2018-02-01

    With the rapid development of the smart grid, the data aggregation point (AP) in the neighborhood area network (NAN) is becoming increasingly important for forwarding the information between the home area network and wide area network. Due to limited budget, it is unable to use one-single access technology to meet the ongoing requirements on AP coverage. This paper first introduces the wired and wireless hybrid access network with the integration of long-term evolution (LTE) and passive optical network (PON) system for NAN, which allows a good trade-off among cost, flexibility, and reliability. Then, based on the already existing wireless LTE network, an AP association optimization model is proposed to make the PON serve as many APs as possible, considering both the economic efficiency and network reliability. Moreover, since the features of the constraints and variables of this NP-hard problem, a hybrid intelligent optimization algorithm is proposed, which is achieved by the mixture of the genetic, ant colony and dynamic greedy algorithm. By comparing with other published methods, simulation results verify the performance of the proposed method in improving the AP coverage and the performance of the proposed algorithm in terms of convergence.

  12. Hopf Bifurcation Analysis of a Gene Regulatory Network Mediated by Small Noncoding RNA with Time Delays and Diffusion

    Science.gov (United States)

    Li, Chengxian; Liu, Haihong; Zhang, Tonghua; Yan, Fang

    2017-12-01

    In this paper, a gene regulatory network mediated by small noncoding RNA involving two time delays and diffusion under the Neumann boundary conditions is studied. Choosing the sum of delays as the bifurcation parameter, the stability of the positive equilibrium and the existence of spatially homogeneous and spatially inhomogeneous periodic solutions are investigated by analyzing the corresponding characteristic equation. It is shown that the sum of delays can induce Hopf bifurcation and the diffusion incorporated into the system can effect the amplitude of periodic solutions. Furthermore, the spatially homogeneous periodic solution always exists and the spatially inhomogeneous periodic solution will arise when the diffusion coefficients of protein and mRNA are suitably small. Particularly, the small RNA diffusion coefficient is more robust and its effect on model is much less than protein and mRNA. Finally, the explicit formulae for determining the direction of Hopf bifurcation and the stability of the bifurcating periodic solutions are derived by employing the normal form theory and center manifold theorem for partial functional differential equations. Finally, numerical simulations are carried out to illustrate our theoretical analysis.

  13. Layer 2 and 3 contention resolution and radio-over-fiber in OCDMA PON for transparent optical access in personal networks

    NARCIS (Netherlands)

    Huiszoon, B.; Hartog, F.T.H. den; Larrodé, M.G.; Koonen, A.M.J.

    2008-01-01

    In this paper, we analyze, for the first time, the eminent role of optical transparent networking in personal networks. We show how an optical access network mitigates many issues with respect to connectivity and mobility management. A concrete personal network user-scenario deduces requirements for

  14. Pharma Pricing & Market Access Europe 2016--Health Network Communications' Tenth Annual Conference (February 23-25, 2016--London, UK).

    Science.gov (United States)

    D'Souza, P

    2016-03-01

    Tighter national budgets and escalating drug prices continue to present challenges for pharmaceutical market access strategies and societal cost of care. As pharmaceutical companies and medical governmental advisory organizations enter tougher negotiations, hospital trusts and other dispensary firms face barriers to receiving the best medical treatment, and as a result patient access is limited. The 2016 HealthNetwork Communications' Pharma Pricing & Market Access Europe meeting brought together pharmaceutical, medical governmental advisory and stakeholders and market access/pricing consultants, to encourage discussions and negotiations into how to improve the drug pricing system and consequential market access strategies while achieving the respective reimbursement and affordability objectives. Copyright 2016 Prous Science, S.A.U. or its licensors. All rights reserved.

  15. From cell biology to immunology: Controlling metastatic progression of cancer via microRNA regulatory networks.

    Science.gov (United States)

    Park, Jae Hyon; Theodoratou, Evropi; Calin, George A; Shin, Jae Il

    2016-01-01

    Recently, the study of microRNAs has expanded our knowledge of the fundamental processes of cancer biology and the underlying mechanisms behind tumor metastasis. Extensive research in the fields of microRNA and its novel mechanisms of actions against various cancers has more recently led to the trial of a first cancer-targeted microRNA drug, MRX34. Yet, these microRNAs are mostly being studied and clinically trialed solely based on the understanding of their cell biologic effects, thus, neglecting the important immunologic effects that are sometimes opposite of the cell biologic effects. Here, we summarize both the cell biologic and immunologic effects of various microRNAs and discuss the importance of considering both effects before using them in clinical settings. We stress the importance of understanding the miRNA's effect on cancer metastasis from a "systems" perspective before developing a miRNA-targeted therapeutic in treating cancer metastasis.

  16. MicroRNA Gene Regulatory Networks in Peripheral Nerve Sheath Tumors

    Science.gov (United States)

    2013-09-01

    3.0 hierarchical clustering of both the X and the Y-axis using Centroid linkage. The resulting clustered matrixes were visualized using Java Treeview...To score potential ceRNA interactions, the 54979 human interactions were loaded into a mySQL database and when the user selects a given mRNA all...on the fly using PHP interactions with mySQL in a similar fashion as previously described in our publicly available databases such as sarcoma

  17. MicroRNA Dysregulation, Gene Networks, and Risk for Schizophrenia in 22q11.2 Deletion Syndrome

    Science.gov (United States)

    Merico, Daniele; Costain, Gregory; Butcher, Nancy J.; Warnica, William; Ogura, Lucas; Alfred, Simon E.; Brzustowicz, Linda M.; Bassett, Anne S.

    2014-01-01

    The role of microRNAs (miRNAs) in the etiology of schizophrenia is increasingly recognized. Microdeletions at chromosome 22q11.2 are recurrent structural variants that impart a high risk for schizophrenia and are found in up to 1% of all patients with schizophrenia. The 22q11.2 deletion region overlaps gene DGCR8, encoding a subunit of the miRNA microprocessor complex. We identified miRNAs overlapped by the 22q11.2 microdeletion and for the first time investigated their predicted target genes, and those implicated by DGCR8, to identify targets that may be involved in the risk for schizophrenia. The 22q11.2 region encompasses seven validated or putative miRNA genes. Employing two standard prediction tools, we generated sets of predicted target genes. Functional enrichment profiles of the 22q11.2 region miRNA target genes suggested a role in neuronal processes and broader developmental pathways. We then constructed a protein interaction network of schizophrenia candidate genes and interaction partners relevant to brain function, independent of the 22q11.2 region miRNA mechanisms. We found that the predicted gene targets of the 22q11.2 deletion miRNAs, and targets of the genome-wide miRNAs predicted to be dysregulated by DGCR8 hemizygosity, were significantly represented in this schizophrenia network. The findings provide new insights into the pathway from 22q11.2 deletion to expression of schizophrenia, and suggest that hemizygosity of the 22q11.2 region may have downstream effects implicating genes elsewhere in the genome that are relevant to the general schizophrenia population. These data also provide further support for the notion that robust genetic findings in schizophrenia may converge on a reasonable number of final pathways. PMID:25484875

  18. Improving Accessibility for Seniors in a Life-Long Learning Network: A Usability Study of Learning Websites

    Science.gov (United States)

    Gu, Xiaoqing; Ding, Rui; Fu, Shirong

    2011-01-01

    Senior citizens are comparatively vulnerable in accessing learning opportunities offered on the Internet due to usability problems in current web design. In an effort to build a senior-friendly learning web as a part of the Life-long Learning Network in Shanghai, usability studies of two websites currently available to Shanghai senior citizens…

  19. Book Review - V Pogoretskyy, Freedom of Transit and Access to Gas Pipeline Networks Under WTO Law (Cambridge University Press, 2017)

    NARCIS (Netherlands)

    Marhold, Anna

    2017-01-01

    In Freedom of Transit and Access to Pipeline Networks under WTO Law, the author appropriately introduces the topic by stating that energy is featuring increasingly prominently as a topic in international trade law. Indeed, while being a dormant issue in the World Trade Organization (“WTO” forum for

  20. Principals' Perceptions of Social Networking Access, Its Relationship to Cyberbullying, the Importance of Student Achievement, and the School Environment

    Science.gov (United States)

    Townsel, Andrae

    2015-01-01

    The purpose of this study was to examine the principals' perceptions of social networking access and its relationship to cyberbullying, the importance of student achievement, and the school environment across the United States. This research provides some evidence on how principals perceive and understand the threat of cyberbullying and its…