The effects of fish gender on susceptibility to acute Streptococcus agalactiae infection in Javanese medaka Oryzias javanicus.

Science.gov (United States)

Amal, M N A; Zarif, S T; Suhaiba, M S; Aidil, M R M; Shaqinah, N N; Zamri-Saad, M; Ismail, A

2017-12-05

This study describes the susceptibility of different fish gender following acute Streptococcus agalactiae infection by using Javanese medaka Oryzias javanicus as test fish. The fish were grouped into four groups, which were: (1) all-male; (2) all-female; (3) mixed-gender (1 male: 1 female ratio); and (4) control non-infected (1 male: 1 female ratio). The fish in group 1, 2 and 3 were intraperitoneally exposed to 5.4 × 10 8  CFU/mL of S. agalactiae, while for group 4, the fish were exposed using sterile broth. The main clinical signs and histopathological changes of infected Javanese medaka were commonly observed in S. agalactiae infected fishes. However, no difference on clinical signs and histopathological changes of fish in group 1, 2 and 3 were noticed. The Javanese medaka mortality in group 1, 2 and 3 were observed from 4 h post infection (hpi) to 6 hpi, with the cumulative mortality from 3% to 30%. Then, the mortality increased at 12 hpi, with the range from 53% to 80%. However, 100% of the infected fish dead at 24 hpi. No clinical sign, histopathological change and fish mortality recorded in group 4. Generally, the clinical signs, mortality patterns, cumulative mortality and histopathological changes of Javanese medaka infected by S. agalactiae did not show any difference between the all-male, all-female and mixed-gender groups. This indicates that the susceptibility of fish to S. agalactiae infection is not influenced by their gender. Copyright © 2017 Elsevier Ltd. All rights reserved.

The effect of fish gender on susceptibility to acute Streptococcus agalactiae infection in Javanese medaka Oryzias javanicus.

Science.gov (United States)

Amal, M N A; Zarif, S T; Suhaiba, M; Aidil, M R M; Shaqinah, N N; Zamri-Saad, M; Ismail, A

2017-12-04

This study describes the susceptibility of different fish gender following acute Streptococcus agalactiae infection by using Javanese medaka Oryzias javanicus as test fish. The fish were grouped into four groups, which were: (1) all-male; (2) all-female; (3) mixed-gender (1 male: 1 female ratio); and (4) control non-infected (1 male: 1 female ratio). The fish in group 1, 2 and 3 were intraperitoneally exposed to 5.4 × 10 8  CFU/ml of S. agalactiae, while for group 4, the fish were exposed using sterile broth. The main clinical signs and histopathological changes of infected Javanese medaka were commonly observed in S. agalactiae infected fishes. However, no difference on clinical signs and histopathological changes of fish in group 1, 2 and 3 were noticed. The Javanese medaka mortality in group 1, 2 and 3 were observed from 4 h post infection (hpi) to 6 hpi, with the cumulative mortality from 3% to 30%. Then, the mortality increased at 12 hpi, with the range from 53% to 80%. However, 100% of the infected fish dead at 24 hpi. No clinical signs, histopathological changes and fish mortality recorded in group 4. Generally, the clinical signs, mortality patterns, cumulative mortality and histopathological changes of Javanese medaka infected by S. agalactiae did not show any difference between the all-male, all-female and mixed-gender groups. This indicates that the susceptibility of fish to S. agalactiae infection is not influenced by their gender. Copyright © 2017. Published by Elsevier Ltd.

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Indian Academy of Sciences (India)

holding a quivering mouse deer (Tragulus memmina), Asia's small- est deer, in it's mouth. .... pack members waiting in the open area. A frequent manoeuvre ... The Whistling Hunters: Field Studies of the Asiatic Wild Dog. (Cuon alpinus).

Study on Phylogenetic Status of Javan Plover Bird (Charadrius, Charadriidae, Charadriiformes through DNA Barcoding Analysis

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Hidayat Ashari

2017-04-01

Full Text Available Javan Plover named Charadrius javanicus is taxonomically under controversy and phylogenetically unresolved yet. Through an analysis of DNA barcode, this study aims (1 to confirm whether Javan Plover is separated species named Charadrius javanicus or a subspecies of C. alexandrinus which named C. a. javanicus and (2 to determine a relationship within this genus. Totally 666 bp DNA sequences of COI barcode gene were analyzed.  The results showed that a sequence divergence between Javan Plover and C. alexandrinus alexandrinus was only 1.2%, while sequence divergences between C.a.alexandrinus and others species, or between Javan Plover and others species were ranged from 9-12%.  Neighbour-joining (NJ and maximum-parsimony (MP analyses showed that all individuals of both Javan Plover and Kenith Plover were clustered together, and supported by 99 % and 100 % of bootstrap value in NJ and MP, respectively. This study tends to support the previous findings that Javan Plover was not a separated species named C. javanicus, but it was as a subspecies of C. alexandrinus; named C. a. javanicus. There were two groups of Plover in this study; (C. leschenaultii and C. javanicus + C.a.alexandrinus, and (C.dubius and C. melodus + C. semipalmatus. DNA barcoding analysis can give certainty taxonomic status of the bird. Then, this study has implication as a basic data that can be used to provide and support the planning of Javan plover conservation programs. 

Evaluation of the catalytic activity of lipases immobilized on chrysotile for esterification

Energy Technology Data Exchange (ETDEWEB)

Silva, Jane E.S.; Jesus, Paulo C. [Universidade Regional de Blumenau, SC (Brazil). Dept. de Quimica]. E-mail: pcj@furb.rct-sc.br

2003-06-01

In the present work, the ester synthesis in organic media catalyzed by lipases immobilized on chrysotile was studied. Lipases of different sources (Mucor javanicus, Pseudomonas cepacia, Rhizopus oryzae, Aspergillus niger and Candida rugosa) were immobilized on chrysotile, an inexpensive magnesium silicate, and used for esterification of hexanoic, octanoic and lauric acid with methanol, ethanol, 1-butanol and 1-octanol at 25 deg C in hexane as solvent. The best results were obtained with Mucor javanicus lipase and lauric acid giving yields of 62-97% of ester. (author)

Evaluation of the catalytic activity of lipases immobilized on chrysotile for esterification

International Nuclear Information System (INIS)

Silva, Jane E.S.; Jesus, Paulo C.

2003-01-01

In the present work, the ester synthesis in organic media catalyzed by lipases immobilized on chrysotile was studied. Lipases of different sources (Mucor javanicus, Pseudomonas cepacia, Rhizopus oryzae, Aspergillus niger and Candida rugosa) were immobilized on chrysotile, an inexpensive magnesium silicate, and used for esterification of hexanoic, octanoic and lauric acid with methanol, ethanol, 1-butanol and 1-octanol at 25 deg C in hexane as solvent. The best results were obtained with Mucor javanicus lipase and lauric acid giving yields of 62-97% of ester. (author)

Evaluation of the catalytic activity of lipases immobilized on chrysotile for esterification

Directory of Open Access Journals (Sweden)

Silva Jane E. S.

2003-01-01

Full Text Available In the present work, the ester synthesis in organic media catalyzed by lipases immobilized on chrysotile was studied. Lipases of different sources (Mucor javanicus, Pseudomonas cepacia, Rhizopus oryzae, Aspergillus niger and Candida rugosa were immobilized on chrysotile, an inexpensive magnesium silicate, and used for esterification of hexanoic, octanoic and lauric acid with methanol, ethanol, 1-butanol and 1-octanol at 25ºC in hexane as solvent. The best results were obtained with Mucor javanicus lipase and lauric acid giving yields of 62-97% of ester.

Distribution, relative abundance and occupancy of selected mammals along paved road in Kubah National Park, Sarawak, Borneo

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Jayasilan Mohd-Azlan

2018-06-01

Full Text Available Research on ecological impacts of roads has seldom been studied on Borneo. This includes information on their influence on wildlife dynamic in National Parks and other areas harbouring biodiversity. This knowledge is important to prescribe best management practices, by avoiding, minimising and compensating for adverse impacts such structures may have on individuals, populations and communities. In order to understand the effects of a paved road, located within a protected area (Kubah National Park, Sarawak, western Borneo, on the local mammal species, we set up an array of 20 camera traps using stratified sampling, along a spatial gradient of five distance categories from the road. This ranged from the edge of the road to the interior part of the forests, in the following manner: A 0–5 m at the edge, B 5–100 m, C 100–200 m, D 200–300 m, and E 300–400 m. We explored the relationships between the distance to the road with mammalian species richness, and subsequently, for carnivores, ungulates, and Viverridae sp. (civets and finally, attempted to estimate the density of these animal groups. Camera trap surveys accumulated 2161 camera days, which resulted in 1938 independent animal photos that consisted of19 species of wild mammals, six species of birds and one reptile species along the gradient. This study suggests that areas close to the road (0–5 m are used significantly less than other areas (n = 8, while cameras located within the distance range from 5–100 m and 100–200 m detected the highest number of species (n = 18. The highest numbers of ungulates and members of the family Viverridae (civets were recorded at 5–100 m, while the distance category 100–200 m recorded the most numbers of carnivores. Several species that could be tolerant to some level of disturbance, such as the leopard cat (Prionailurus bengalensis, banded palm civet (Hemigalus derbyanus, long-tailed porcupine (Trichys fasciculata, and lesser mousedeer

Effect of culture conditions on the activity of amylase used for alcoholic fermentation

Energy Technology Data Exchange (ETDEWEB)

Lee, S.D.; Ryu, Y.H.

1973-01-01

A wheat bran culture was used for media for the mold strains: Aspergillus oryzae, A. kawachii, A. usamii, and Rhizopus javanicus, to determine in which strain the amylase activity could be increased the most. The wheat bran media provided 47, 51, and 55% starch for each strain. To the media were added 3 nitrogen sources, viz.: (NH/sub 4/)/sub 2/SO/sub 4/, casein, and (NH/sub 4/)/sub 2/SO/sub 4/ - casein mixture. Each nitrogen source was made available at 2, 4, and 6% levels except only 2% (NH/sub 4/)/sub 2/SO/sub 4/ was used. The results obtained were as follows: (1) The ..cap alpha..-amylase activity was highest in media with 47% starch and 6% casein. (2) The ..beta..-amylase activity was highest in media with 51% starch and 2% (NH/sub 4/)/sub 2/SO/sub 4/ - casein. (3) Both ..cap alpha..- and ..beta..-amylase activities in A. usamii were highest in the media with 47% starch and no additional nitrogen source. (4) Of the 4 strains examined the ..cap alpha..- and ..beta..-amylase activities in R. javanicus were both relatively the highest. (5) The ..cap alpha..- and ..beta..-amylase activities of the strains examined decreased as the percentage of starch was increased except in R. javanicus.

50 CFR 665.421 - Definitions.

Science.gov (United States)

2010-10-01

.... harlequin tuskfish, red-breasted wrasse Cheilinus fasciatus. ring-tailed wrasse Oxycheilinus unifasciatus... margaritacous. three-spot wrasse Halichoeres trimaculatus. surge wrasse Thalassoma purpureum. red ribbon wrasse... javanicus. undulated moray eel Gymnothorax undulatus. Octopodidae (Octopus) gamsun octopus Octopus cyanea...

Enzymatic resolution of (R,S-ibuprofen and (R,S-ketoprofen by microbial lipases from native and commercial sources Resolução enzimática do (R,S-ibuprofeno e (R,S-cetoprofeno por lipases microbianas de fontes nativas e comerciais

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Patrícia de Oliveira Carvalho

2006-09-01

Full Text Available The enantioselectivity (E of native lipases from Aspergillus niger, Aspergillus terreus, Fusarium oxysporum, Mucor javanicus, Penicillium solitum and Rhizopus javanicus in the resolution of (R,S-ibuprofen and (R,S-ketoprofenenantiomers by esterification reaction with 1-propanol in isooctane was compared with known commercial Candida rugosa (Sigma and Candida antarctica (Novozym®435 lipases. In the resolution of (R,S-ibuprofen, C. rugosa lipase showed good selectivity (E = 12 while Novozym®435 (E = 6.7 and A. niger (E = 4.8 lipases had intermediate selectivities. Other enzymes were much less selective (E around 2.3 and 1.5, under tested conditions. After preliminary optimization of reaction conditions (water content, enzyme concentration and presence of additives the enantioselectivity of native A. niger lipase could be enhanced substantially (E = 15. All tested lipases showed low selectivity in the resolution of (R,S-ketoprofen because poor ester yields and low enantiomeric excess of the acid remaining were achieved.A enantioseletividade (E das lipases nativas de Aspergillus niger, Aspergillus terreus, Fusarium oxysporum, Mucor javanicus, Penicillium solitum e Rhizopus javanicus na resolução dos enantiômeros do (R,S-ibuprofeno e (R,S-cetoprofeno na reação de esterificação com 1-propanol em isoctano foi comparada com as lipases comerciais de Candida rugosa (Sigma e Candida antarctica (Novozym®435. A lipase de C. rugosa mostrou boa enantioseletividade (E = 12 comparada com as da Novozym®435 (E = 6.7, de A. niger (E=4.8 e com as outras lipases que foram muito menos seletivas (E por volta de 2.3 e 1.5 na resolução do (R,S-ibuprofeno, dentro das condições testadas. Após uma otimização preliminar das condições da reação (conteúdo de água, concentração da enzima e presença de aditivos a enantioseletividade da lipase de A. niger pôde ser substancialmente aumentada (E = 15. Todas as lipases testadas mostraram baixa

Isaria poprawskii sp. nov. (Hypocreales: Cordycipitacae), a new entomopathogenic fungus from Texas affecting sweet potato whitefly

Science.gov (United States)

Isaria poprawskii is described as a new entomopathogenic species similar to Isaria javanica (=Paecilomyces javanicus). It was discovered ont he sweet potato whitefly, Bemisia tabaci biotype B in the Lower Rio Grande Valley of Texas (LRGV), USA. Morphological and DNA examinations indicated the dist...

Hubungan Kekerabatan Sapi Aceh dengan Menggunakan Daerah Displacement-loop

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Mohd. Agus Nashri Abdullah

2008-10-01

Full Text Available Relationship of aceh cattle using displacement-loop region ABSTRACT. The aims of this study were to describe relationship of D-loop of mtDNA Aceh cattle which is useful database for conducting conservation programme. The whole blood samples were collected (8 samples for D-loop analysis from four locations which were Aceh Besar, Pidie, North Aceh regencies and Banda Aceh city. Out group whole blood samples were collected from two samples from Bali cattles (Bali Island, Madura cattle (Madura Island, Pesisir cattle (West Sumatera respectively and one sample from PO cattle (West Java. Amplification of D-loop sequences of mtDNA with BIDLF and BIDLR primary have PCR product 980 bp. The Data were analyzed using Squint 1.02 and MEGA 4.0 programme. Result of analysis indicate that Aceh cattle have nearer relationship with zebu and there is items inset of genetik Bali cattle (Bos javanicus at the end sequences start ke-354 situs up to 483, so that the origin Aceh cattle was from Bos indicus which have hybridization with Bos javanicus.

Persistent Bovine Viral Diarrhea Virus infection in domestic and wild small ruminants and camelids including the mountain goat (Oreamnos americanus

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Danielle Darracq Nelson

2016-01-01

Full Text Available Bovine viral diarrhea virus (BVDV is a Pestivirus best known for causing a variety of disease syndromes in cattle, including gastrointestinal disease, reproductive insufficiency, immunosuppression, mucosal disease, and hemorrhagic syndrome. The virus can be spread by transiently infected individuals and by persistently infected animals that may be asymptomatic while shedding large amounts of virus throughout their lifetime. BVDV has been reported in over 40 domestic and free-ranging species, and persistent infection has been described in eight of those species: white-tailed deer, mule deer, eland, mousedeer, mountain goats, alpacas, sheep, and domestic swine. This paper reviews the various aspects of BVDV transmission, disease syndromes, diagnosis, control, and prevention, as well as examines BVDV infection in domestic and wild small ruminants and camelids including mountain goats (Oreamnos americanus.

Comparative cytogenetics of six Indo-Pacific moray eels (Anguilliformes: Muraenidae) by chromosomal banding and fluorescence in situ hybridization.

Science.gov (United States)

Coluccia, E; Deidda, F; Cannas, R; Lobina, C; Cuccu, D; Deiana, A M; Salvadori, S

2015-09-01

A comparative cytogenetic analysis, using both conventional staining techniques and fluorescence in situ hybridization, of six Indo-Pacific moray eels from three different genera (Gymnothorax fimbriatus, Gymnothorax flavimarginatus, Gymnothorax javanicus, Gymnothorax undulatus, Echidna nebulosa and Gymnomuraena zebra), was carried out to investigate the chromosomal differentiation in the family Muraenidae. Four species displayed a diploid chromosome number 2n = 42, which is common among the Muraenidae. Two other species, G. javanicus and G. flavimarginatus, were characterized by different chromosome numbers (2n = 40 and 2n = 36). For most species, a large amount of constitutive heterochromatin was detected in the chromosomes, with species-specific C-banding patterns that enabled pairing of the homologous chromosomes. In all species, the major ribosomal genes were localized in the guanine-cytosine-rich region of one chromosome pair, but in different chromosomal locations. The (TTAGGG)n telomeric sequences were mapped onto chromosomal ends in all muraenid species studied. The comparison of the results derived from this study with those available in the literature confirms a substantial conservation of the diploid chromosome number in the Muraenidae and supports the hypothesis that rearrangements have occurred that have diversified their karyotypes. Furthermore, the finding of two species with different diploid chromosome numbers suggests that additional chromosomal rearrangements, such as Robertsonian fusions, have occurred in the karyotype evolution of the Muraenidae. © 2015 The Fisheries Society of the British Isles.

Termites community as environmental bioindicators in highlands: a case study in eastern slopes of Mount Slamet, Central Java

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IDHAM SAKTI HARAHAP

2011-10-01

Full Text Available Pribadi T,Raffiudin R,HarahapIS (2011Termites community as environmental bioindicators in highlands: a case study in eastern slopes of Mount Slamet, Central Java. Biodiversitas 12: 235-240. Termites ecological behaviour is much affected by land use change and disturbance level. Their variation in diversity can be used as bioindicator of environmental quality. However, termite community response to land use changes and habitat disturbance in highland ecosystems remains poorly understood. This study was conducted to investigate the response of termite community to land use intensification and to explore their role as environmental bioindicator in Mount Slamet. A standard survey protocol was used to collect termites in five land use typesof various disturbance levels,i.e. protected forest, recreation forest, production forest,agroforestry, and urban area. It was found two termite families i.e. Rhinotermitidae and Termitidae with seven species, i.e Schedorhinotermes javanicus, Procapritermes sp, Pericapritermes semarangi, Macrotermes gilvus, Microtermes insperatus, Nasutitermes javanicus, and N. matanganensis. Termite species’ richness and evenness, Shannon-Wiener index, relative abundance, and biomass of termite were declined along with the land use types and disturbance level from protected forest to urban area. Habitat disturbance was the main declining factor of termite diversity. Termite composition changed along with the land use disturbance level. Soil feeding termites were sensitive to the disturbance – they were not found in urban area. Hence, their presence or absence can be used as environmental bioindicator to detect habitat disturbance.

Does toxic defence in Nycticebus spp. relate to ectoparasites? The lethal effects of slow loris venom on arthropods.

Science.gov (United States)

Grow, Nanda B; Wirdateti; Nekaris, K A I

2015-03-01

The venom produced by slow lorises (Nycticebus spp.) is toxic both intra- and inter-specifically. In this study we assessed the ecoparasite repellent properties of their venom. We tested venom from two Indonesian slow loris species: Nycticebus javanicus and Nycticebus coucang. Arthropods directly exposed to brachial gland secretions mixed with saliva from both species were immediately impaired or exhibited reduced activity (76%), and often died as a result (61%). We found no significant difference in the result of 60-min trials between N. coucang and N. javanicus [X(2)(1, n = 140) = 2.110, p = 0.3482]. We found evidence that the degree of lethality of the venom varies according to the arthropod taxa to which it is exposed. While most maggots (84%) were initially impaired from the venom after 10 min, maggots died after a 1 h trial 42% of the time. In contrast, at the end of 1 h trial, spiders died 78% of the time. For all arthropods, the average time to death from exposure was less than 25 min (M = 24.40, SD = 22.60). Ectoparasites including ticks, members of the arachnid order, are known to transmit pathogens to hosts and may be an intended target of the toxic secretions. Our results suggest that one function of slow loris venom is to repel parasites that affect their fitness, and that their topical anointing behaviour may be an adaptive response to ectoparasites. Copyright © 2015 Elsevier Ltd. All rights reserved.

Age effect on post freezing sperm viability of Bali cattle (Bos javanicus)

Science.gov (United States)

Hapsari, R. D.; Khalifah, Y.; Widyas, N.; Pramono, A.; Prastowo, S.

2018-03-01

Post freezing sperm viability is one of factors which determine artificial insemination success. In the other side, bull’s or sire age influences the semen quality through sperm membrane constituent. It is known that freezing process change the sperm membrane during the processing stage. This research aims to know the effect of sire age on post freezing sperm viability of Bali cattle. The samples were collected in Singosari Artificial Insemination Centre, Malang, East Java, Indonesia on September - November 2016. Eight Bali cattle (4 and 7 y.o, 4 heads in each group) were used as semen source. Semen was collected using artificial vagina, 10 times spanning for 5 weeks (2 times per week, interval 3 and 4 days) in a row. The samples were then evaluated at fresh, chill and frozen stage. Fresh semen was diluted in Tris-citrate-egg yolk 20% (v/v) followed with chilling and freezing. Semen qualities were observed as sperm % motility (MOT), % live sperm using eosin-nigrosine staining (EOS) and % sperm membrane integrity using hypoosmotic swelling test (HOS). Variable comparisons between age groups were done using t-test. On the average, 4 y.o bulls showed higher semen quality at fresh, chill and frozen compared to 7 y.o in MOT (68.00±6.39 vs 65.9±7.62 56.40±3.71 vs 54.33±5.83 44.25±3.52 vs 40.40±7.06), EOS (72.08±6.63 vs 71.82±7.38 57.81±3.83 vs 57.41±6.32 53.16 ±8.41 vs 46.49±9.13) and HOS (60.85±13.91 vs 54.84±13.43 53.16 ±8.41 vs 46.49±9.13 44.6±9.39 vs 33.8±10.70) respectively. Statistical analysis results showed that age was significantly (PBali cattle (4 y.o) have more viable post freezing sperm compared to the older ones (7 y.o).

Distribution of Studied Insectivorous Bat Species of Myanmar

International Nuclear Information System (INIS)

Nyo Nyo

2005-10-01

Fourty-five species of insectivourous bats; Craseonycteris thonglongyai, Emballonura monticola, Taphozous melenopongon, T. theobaldi, T. longimanus, Megaderma lyra, M. spasma, Rhinolophus affinis, R. rouxii, R. pusillus, R. lepidus, R. macrotis, R. trifoliatus, R. pearsoni, R. malayanus, R. stheno, R. thomasi, R. shameli, R. acuminatus, R. marshalli, Rhinolophus sp., Hipposideros pomona, H. larvatus, H. armiger, H. lylei, H. ater, H. fulvus, Aselliscus stoliczkanus, Tadarida plicata, Myotis siligorensis, M. muricola, M. horsfieldii, M. hasseltii, M. chinensis, Scotophilus heathii, S. kuhlii, Ia io, Pipistrellus javanicus, P. coromandra, P. pulveratus, P. paterculus, P. affinis, P. ceylonicus, Miniopterus pusillus and M. magnater were distributed in 7 Divisions; Yangon, Bago, Ayeyawady, Taninthayi, Magway, Mandalay and Sagaing Division, and 7 States; Mon, Kayin, Shan, Chin, Kayah, Kachin and Rakhine States of Myanmar.

Phylogenetic relationships of Malayan gaur with other species of the genus Bos based on cytochrome b gene DNA sequences.

Science.gov (United States)

Rosli, M K A; Zakaria, S S; Syed-Shabthar, S M F; Zainal, Z Z; Shukor, M N; Mahani, M C; Abas-Mazni, O; Md-Zain, B M

2011-03-22

The Malayan gaur (Bos gaurus hubbacki) is one of the three subspecies of gaurs that can be found in Malaysia. We examined the phylogenetic relationships of this subspecies with other species of the genus Bos (B. javanicus, B. indicus, B. taurus, and B. grunniens). The sequence of a key gene, cytochrome b, was compared among 20 Bos species and the bongo antelope, used as an outgroup. Phylogenetic reconstruction was employed using neighbor joining and maximum parsimony in PAUP and Bayesian inference in MrBayes 3.1. All tree topologies indicated that the Malayan gaur is in its own monophyletic clade, distinct from other species of the genus Bos. We also found significant branching differences in the tree topologies between wild and domestic cattle.

Differentiation of Sex Chromosomes and Karyotype Characterisation in the Dragonsnake Xenodermus javanicus (Squamata: Xenodermatidae)

Czech Academy of Sciences Publication Activity Database

Rovatsos, M.; Johnson Pokorná, Martina; Kratochvíl, L.

2015-01-01

Roč. 147, č. 1 (2015), s. 48-54 ISSN 1424-8581 Institutional support: RVO:67985904 Keywords : interstitial telomeric repeats * sex chromosomes * sex determination Subject RIV: EG - Zoology Impact factor: 1.638, year: 2015

Millipedes and centipedes in German greenhouses (Myriapoda: Diplopoda, Chilopoda

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Peter Decker

2014-04-01

Full Text Available A review is given of all the literature records of millipedes and centipedes that have been found in German greenhouses together with additional records for 29 such sites. Species lists are given for 46 greenhouses investigated throughout Germany. Thirty-five diplopod and 18 chilopod species were found to occur in greenhouses, of which 15 (3 Chilopoda, 12 Diplopoda are restricted to this type of habitat. First records for Germany include Anadenobolus monilicornis (Porat, 1876, Epinannolene cf. trinidadensis Chamberlin, 1918, Epinannolene sp., Mesoiulus gridellii Strasser, 1934, Leptogoniulus sorornus (Butler, 1876, Rhinotus purpureus (Pocock, 1894, Cryptops doriae Pocock, 1891, Lamyctes coeculus (Brölemann, 1889 and Tygarrup javanicus (Attems, 1907. The millipedes Oxidus gracilis (C. L. Koch, 1847 and Amphitomeus attemsi (Schubart, 1934 and the centipedes Lithobius forficatus (Linnaeus, 1758 and Cryptops hortensis (Donovan, 1810 are the species most frequently found in greenhouses.

Stereo-selective hydrolytic reaction of toxic compounds by enzyme immobilized on porous ceramics; Takoshitsu ceramics kotaika koso ni yoru dokusei kagobutsu no rittai sentakuteki kasui bunkai hanno

Energy Technology Data Exchange (ETDEWEB)

Kato, K.; Saito, T. [National Industrial Research Institute of Nagoya, Nagoya (Japan)

2000-08-25

Experiment was made on stereo-selective hydrolytic reaction of trifluoroethyl ester of ketoprophene by various kinds of lipase. In addition, study was made on the stability of lipase simply immobilized on porous ceramics under the existence of organic solvent. In the experiment, the hydrolytic activity of 8 kinds of lipase was studied for ketoprophene monochloroethyl ester (1a) and trifluoroethyl ester (1b). The experiment result showed that lipase M originating in mold (Mucor Javanicus) shows a high reactivity and stereo-selectivity for the compound (1a). The lipase immobilized on porous ceramics was easily obtained by a very simple method composed of only throwing carriers into enzyme suspension, agitation and refrigerated drying. The lipase immobilized on porous ceramics 'Toyonite 200-A' synthesized from kaolinite retained the residual activity of nearly 50%, original selectivity and considerable stability after 5 times of repetitive uses. This study result is useful for bio- reactors and bio-sensors for synthesis or decomposition of compounds. (NEDO)

MtDNA diversity and genetic lineages of four cattle breeds in Malaysia

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Somarny, W.W.M.Z.

2015-06-01

Full Text Available There is lack of comprehensive studies on the genetic diversity or phylogenetic analysis of beef cattle breeds in Malaysia. In this study, the partial sequence of mitochondrial DNA cytochrome b gene (cyt b was analysed from blood samples obtained from 25 Chinese Yellow Cattle (CY, 33 Kedah-Kelantan (KK, 32 Brakmas (BM and 30 Bali cattle (BC. Based on these 120 individuals, 19 mtDNA haplotypes (GenBank Accession No. GU67340 - GU67358 were identified by polymorphisms at 31 sites. Hap19 was predominant in BM (78%, KK (82% and CY (100% indicating similar origin or gene flow between breeds whilst Hap11 was exclusively for BC. However, there were only two nucleotide differences between these two major haplotypes. These results can be interpreted that these representative cattle in these haplotypes are admixtures of B. indicus or B. javanicus through maternal ancestry. Conversely, the CY cattle investigated are highly inbred where no variation could be observed in the short segment investigated.

Improved activity of lipase immobilized in microemulsion-based organogels for (R, S-ketoprofen ester resolution: Long-term stability and reusability

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Wei-Wei Zhang

2015-09-01

Full Text Available Microemulsion-based organogels (MBGs were effectively employed for the immobilization of four commonly used lipases. During the asymmetric hydrolysis of ketoprofen vinyl ester at 30 °C for 24 h, lipase from Rhizomucor miehei and Mucor javanicus immobilized in microemulsion-based organogels (RML MBGs and MJL MBGs maintained good enantioselectivities (eep were 86.2% and 99.2%, respectively, and their activities increased 12.8-fold and 7.8-fold, respectively, compared with their free forms. They gave higher yields compared with other lipase MBGs and exhibited better enantioselectivity than commercial immobilized lipases. Immobilization considerably increased the tolerance to organic solvents and high temperature. Both MJL MBGs and RML MBGs showed excellent reusability during 30 cycles of repeated 24 h reactions at 30 °C (over 40 days. The system maintained yields of greater than 50%, while the ees values of RML MBGs and MJL MBGs remained nearly constant at 95% and 88%, respectively.

Cytogenetics of the Javan file snake (Acrochordus javanicus) and the evolution of snake sex chromosomes

Czech Academy of Sciences Publication Activity Database

Rovatsos, M.; Altmanová, Marie; Johnson Pokorná, Martina; Augstenová, B.; Kratochvíl, L.

2018-01-01

Roč. 56, č. 1 (2018), s. 117-125 ISSN 0947-5745 Institutional support: RVO:67985904 Keywords : GATA * genome organization * sex determination Subject RIV: EG - Zoology OBOR OECD: Zoology Impact factor: 2.444, year: 2016

The Genetic Variation of Bali Cattle (Bos javanicus Based on Sex Related Y Chromosome Gene

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A Winaya

2011-09-01

Full Text Available Bali cattle is very popular Indonesian local beef related to their status in community living process of farmers in Indonesia, especially as providers of meat and exotic animal. Bali cattle were able to adapt the limited environment and becoming local livestock that existed until recently.  In our early study by microsatellites showed that Bali cattle have specific allele. In this study we analyzed the variance of partly sex related Y (SRY gene sequence in Bali cattle bull as a source of cement for Artificial Insemination (AI.  Blood from 17 two location of AI center, Singosari, Malang and Baturiti, Bali was collected and then extracted to get the DNA genome.  PCR reaction was done to amplify partially of SRY gene segment and followed by sequencing PCR products to get the DNA sequence of SRY gene. The SRY gene sequence was used to determine the genetic variation and phylogenetic relationship.  We found that Bali cattle bull from Singosari has relatively closed genetic relationship with Baturiti. It is also supported that in early data some Bali bulls of Singosari were came from Baturiti. It has been known that Baturiti is the one source of Bali cattle bull with promising genetic potential. While, in general that Bali bull where came from two areas were not different on reproductive performances. It is important to understand about the genetic variation of Bali cattle in molecular level related to conservation effort and maintaining the genetic characters of the local cattle. So, it will not become extinct or even decreased the genetic quality of Indonesian indigenous cattle.   Key Words : Bali cattle, SRY gene, artificial insemination, phylogenetic, allele   Animal Production 13(3:150-155 (2011

Coccidia from bats (Chiroptera) of the world: a new Eimeria species in Pipistrellus javanicus from Japan.

Science.gov (United States)

Duszynski, D W

1997-04-01

Fecal samples from 56 Japanese bats representing 6 species in 2 families were examined for coccidian oocysts. Two of the 56 (Rhinolophidae), but only 2 sporulated oocysts were seen, which is not enough to describe a new species.

On the origin of Indonesian cattle.

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Kusdiantoro Mohamad

Full Text Available BACKGROUND: Two bovine species contribute to the Indonesian livestock, zebu (Bos indicus and banteng (Bos javanicus, respectively. Although male hybrid offspring of these species is not fertile, Indonesian cattle breeds are supposed to be of mixed species origin. However, this has not been documented and is so far only supported by preliminary molecular analysis. METHODS AND FINDINGS: Analysis of mitochondrial, Y-chromosomal and microsatellite DNA showed a banteng introgression of 10-16% in Indonesian zebu breeds. East-Javanese Madura and Galekan cattle have higher levels of autosomal banteng introgression (20-30% and combine a zebu paternal lineage with a predominant (Madura or even complete (Galekan maternal banteng origin. Two Madura bulls carried taurine Y-chromosomal haplotypes, presumably of French Limousin origin. In contrast, we did not find evidence for zebu introgression in five populations of the Bali cattle, a domestic form of the banteng. CONCLUSIONS: Because of their unique species composition Indonesian cattle represent a valuable genetic resource, which potentially may also be exploited in other tropical regions.

[Species diversity and temporal niche of entomopathogenic fungi in the extensively managed tea plantation soil].

Science.gov (United States)

Guo, Xian-Jian; Shen, Wan-Fang; Liu, Yu-Jun; Chen, Ming-Jun

2014-11-01

The species diversity and temporal niche of entomopathogenic fungi community in the rhizosphere soil collected from the extensively managed Huangshan fuzz tip tea plantation were investigated. A total of 140 soil samples were collected at the location of Tangkou Town, Huangshan of Anhui Province during August, 2012 to June, 2013, and totally 1041 fungal isolates were obtained on selective medium with soil dilution plating. The results showed that the entomopathogenic fungi community in the tea plantation soil was diverse with 13 species in 6 genera. Purpureocillium lilacinum (309 strains), Beauveria bassiana (255 strains), and Metarhizium anisopliae (101 strains) were the dominant species accounting for 29.7%, 24.5% and 9.7% of the relative frequency, respectively. P. lilacinum had the widest temporal niche breadth among these dominant entomopathogenic fungi from the tea plantation soil, while B. bassiana had the narrowest. Among the entomopathogenic fungi, B. bassiana and B. brongniartii had the biggest temporal niche overlap of 1.965, while Isaria javanicus and B. bassiana had the smallest of 0.374.

Impact of climate and moonlight on a venomous mammal, the Javan slow loris (Nycticebus javanicus Geoffroy, 1812)

NARCIS (Netherlands)

Rode-Margono, E.J.; Nekaris, K.A.-I.

2014-01-01

Predation pressure, food availability, and activity may be affected by level of moonlight and climatic conditions. While many nocturnal mammals reduce activity at high lunar illumination to avoid predators (lunarphobia), most visually-oriented nocturnal primates and birds increase activity in bright

A mesocosm study using four native Hawaiian plants to assess nitrogen accumulation under varying surface water nitrogen concentrations.

Science.gov (United States)

Unser, C U; Bruland, G L; Hood, A; Duin, K

2010-01-01

Accumulation of nitrogen (N) by native Hawaiian riparian plants from surface water was measured under a controlled experimental mesocosm setting. Four species, Cladium jamaicense, Cyperus javanicus, Cyperus laevigatus, and Cyperus polystachyos were tested for their ability to survive in coconut fiber coir log media with exposure to differing N concentrations. It was hypothesized that the selected species would have significantly different tissue total nitrogen (TN) concentrations, aboveground biomass, and TN accumulation rates because of habitat preference and physiological growth differences. A general linear model (GLM) analysis of variance (ANOVA) determined that species differences accounted for the greatest proportion of variance in tissue TN concentration, aboveground biomass growth, and accumulation rates, when compared with the other main effects (i.e. N concentration, time) and their interactions. A post hoc test of means demonstrated that C. jamaicense had significantly higher tissue TN concentration, aboveground biomass growth, and accumulation rates than the other species under all N concentrations. It was also hypothesized that tissue TN concentrations and biomass growth would increase in plants exposed to elevated N concentrations, however data did not support this hypothesis. Nitrogen accumulation rates by species were controlled by differences in plant biomass growth.

KEJADIAN INDEL SIMULTAN PADA INTRON 7 GEN BRANCHED-CHAIN Α-KETOACID DEHYDROGENASE E1A (BCKDHA PADA SAPI MADURA

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Asri Febriana

2015-08-01

Full Text Available Madura cattle is one of the Indonesian local cattle breeds derived from crossing between Zebu cattle (Bos indicus and banteng (Bos javanicus. Branched-chain α-ketoacid dehydrogenase (BCKDH is one of the main enzyme complexes in the inner mitochondrial membrane that metabolizes branched chain amino acid (BCAA, ie valine, leucine, and isoleucine. The diversity of the nucleotide sequences of the genes largely determine the efficiency of enzyme encoded. This paper aimed to determine the nucleotide variation contained in section intron 7, exon 8, and intron 8 genes BCKDHA on Madura cattle. This study was conducted on three Madura cattle that used as bull race (karapan, beauty contest (sonok, and beef cattle. The analysis showed that the variation in intron higher than occurred in the exon. Simultaneous indel found at base position 34 and 68 in sonok cattle. In addition, the C266T variant found in beef cattle. These variants do not cause significant changes in amino acids. There was no specific mutation in intron 7, exon 8, and intron 8 were found in Madura cattle designation. This indicated the absence of differentiation Madura cattle designation of selection pressure of BCKDHA gene.

Factors influencing growth hormone levels of Bali cattle in Bali, Nusa Penida, and Sumbawa Islands, Indonesia.

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Suwiti, N K; Besung, I N K; Mahardika, G N

2017-10-01

Bali cattle ( Bos javanicus ) are an Indonesian's native cattle breed that distributed in Asia to Australia. The scientific literature on these cattle is scarce. The growth hormone (GH) of Bali cattle is investigated from three separated islands, namely, Bali, Nusa Penida, and Sumbawa. Forty plasma samples were collected from each island, and the GH was measured using a commercial enzyme-linked immunosorbent assay kit. The data were analyzed based on the origin, sex, and cattle raising practices. We found that the GH level (bovine GH [BGH]) of animal kept in stall 1.72±0.70 µg/ml was higher than free-grazing animal 1.27±0.81 µg/ml. The GH level was lower in female (1.22±0.62 µg/ml) compared to male animals (1.77±0.83 µg/ml). We conclude that the level of BGH in Bali cattle was low and statistically equal from all origins. The different level was related to sex and management practices. Further validation is needed through observing the growth rate following BGH administration and discovering the inbreeding coefficient of the animal in Indonesia.

The Relationships between Morphological Characteristics and Foraging Behavior in Four Selected Species of Shorebirds and Water Birds Utilizing Tropical Mudflats

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Nor Atiqah Norazlimi

2015-01-01

Full Text Available A study was conducted to investigate the relationship between the physical morphology of shorebirds and water birds (i.e., Lesser adjutant (Leptoptilos javanicus, Common redshank (Tringa totanus, Whimbrel (Numenius phaeopus, and Little heron (Butorides striata and their foraging behavior in the mudflats area of Selangor, Peninsular Malaysia, from August 2013 to July 2014 by using direct observation techniques (using binoculars and a video recorder. The actively foraging bird species were watched, and their foraging activities were recorded for at least 30 seconds for up to a maximum of five minutes. A Spearman Rank Correlation highlighted a significant relationship between bill size and foraging time (R=0.443, p<0.05, bill size and prey size (R=-0.052, p<0.05, bill size and probing depth (R=0.42, p=0.003, and leg length and water/mud depth (R=0.706, p<0.005. A Kruskal-Wallis Analysis showed a significant difference between average estimates of real probing depth of the birds (mm and species (H=15.96, p=0.0012. Three foraging techniques were recorded: pause-travel, visual-feeding, and tactile-hunting. Thus, morphological characteristics of bird do influence their foraging behavior and strategies used when foraging.

Efforts In Conserving Purebred Bali Cattle As Draught And Beef Type In Bali Island, Indonesia. (UPAYA PELESTARIAN SAPI BALI SEBAGAI TABUNGAN DAN TIPE PEDAGING DI PULAU BALI INDONESIA

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I Wayan Kasa

2015-02-01

Full Text Available Bali cattle (Bos javanicus d’Alton is a part of the complex evolution of all cattle over a longtime in Indonesia. Little is known of the origin of bali cattle in Southeast Asia.  The geographicaldistribution of Bos (Bibos types of cattle suggests that the centre of domestication was Indo-China and Malaysia, then spreading to Bali. Due to such several unique characters of bali cattle, someefforts have been conducting with main purpose to conserve purebred, draught as well as meat typecattle on Bali in particular and Indonesia in general. Method has been employed in this study areliterature explore, visiting, interview with questionnaire sheet. Set of efforts have been conductingin order to conserve purebred bali cattle by the government. For examples, establishment of balicattle Breeding centre of Pulukan village, establishment of bali cattle Breeding centre of Sobanganvillage, establishment of bali cattle Conservation centre of Nusa Penida Island,  essense of UdayanaUniversity, Bali and role of Department of Animal Husbandry. It could be concluded thatgovernment as a whole have played an important role in conserving the purebred bali cattle asdraught and meat type cattle at certain suitable places in Bali to fulfill local and national daily meatrequirement by establishing good collaboration with related government agency as well as farmers.

Survey of ciguatera at Enewetak and Bikini, Marshall Islands, with notes on the systematics and food habits of ciguatoxic fishes

Energy Technology Data Exchange (ETDEWEB)

Randall, J.E.

1980-04-01

A total of 551 specimens of 48 species of potentially ciguatoxic fishes from Enewetak and 256 specimens of 23 species from Bikini, Marshall Islands, were tested for ciguatoxin by feeding liver or liver and viscera from these fishes to mongooses at 10% body weight (except for sharks, when only muscle tissue was used). The fishes are representatives of the following families: Orectolobidae, Carcharhinidae, Dasyatidae, Muraenidae, Holocentridae, Sphyraenidae, Mugilidae, Serranidae, Lutjanidae, Lethrinidae, Carangidae, Scombridae, Labridae, Scaridae, Acanthuridae, and Balistidae. The species selected were all ones for which toxicity can be expected, including the worst offenders from reports of ciguatera throughout Oceania; only moderate to large-sized adults were tested. In all, 37.3% of the fishes from Enewetak and 19.7% from Bikini gave a positive reaction for ciguatoxin. Because liver and other viscera are more toxic than muscle, the percentage of positive reactions at the level which might cause illness in humans eating only the flesh of these fishes collectively would drop to 16.2 for Enewetak and 1.4 for Bikini. This level of toxicity is not regarded as high for Pacific islands, in general. Because ciguatoxin is acquired through feeding, the food habits of these fishes were investigated. Most of the highly toxic species, including seven of the eight causing severe illness or death in the test animals (Lycodontis javanicus, Cephalopholis argus, Epinephelus hoedtii, E. microdon, Plectropomus leopardus, Aprion virescens, and Lutjanus bohar) are primarily piscivorous.

Evidence for a Higher Number of Species of Odontotermes (Isoptera) than Currently Known from Peninsular Malaysia from Mitochondrial DNA Phylogenies

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Cheng, Shawn; Kirton, Laurence G.; Panandam, Jothi M.; Siraj, Siti S.; Ng, Kevin Kit-Siong; Tan, Soon-Guan

2011-01-01

Termites of the genus Odontotermes are important decomposers in the Old World tropics and are sometimes important pests of crops, timber and trees. The species within the genus often have overlapping size ranges and are difficult to differentiate based on morphology. As a result, the taxonomy of Odontotermes in Peninsular Malaysia has not been adequately worked out. In this study, we examined the phylogeny of 40 samples of Odontotermes from Peninsular Malaysia using two mitochondrial DNA regions, that is, the 16S ribosomal RNA and cytochrome oxidase subunit I genes, to aid in elucidating the number of species in the peninsula. Phylogenies were reconstructed from the individual gene and combined gene data sets using parsimony and likelihood criteria. The phylogenies supported the presence of up to eleven species in Peninsular Malaysia, which were identified as O. escherichi, O. hainanensis, O. javanicus, O. longignathus, O. malaccensis, O. oblongatus, O. paraoblongatus, O. sarawakensis, and three possibly new species. Additionally, some of our taxa are thought to comprise a complex of two or more species. The number of species found in this study using DNA methods was more than the initial nine species thought to occur in Peninsular Malaysia. The support values for the clades and morphology of the soldiers provided further evidence for the existence of eleven or more species. Higher resolution genetic markers such as microsatellites would be required to confirm the presence of cryptic species in some taxa. PMID:21687629

Urban landscape genomics identifies fine-scale gene flow patterns in an avian invasive.

Science.gov (United States)

Low, G W; Chattopadhyay, B; Garg, K M; Irestedt, M; Ericson, Pgp; Yap, G; Tang, Q; Wu, S; Rheindt, F E

2018-01-01

Invasive species exert a serious impact on native fauna and flora and have been the target of many eradication and management efforts worldwide. However, a lack of data on population structure and history, exacerbated by the recency of many species introductions, limits the efficiency with which such species can be kept at bay. In this study we generated a novel genome of high assembly quality and genotyped 4735 genome-wide single nucleotide polymorphic (SNP) markers from 78 individuals of an invasive population of the Javan Myna Acridotheres javanicus across the island of Singapore. We inferred limited population subdivision at a micro-geographic level, a genetic patch size (~13-14 km) indicative of a pronounced dispersal ability, and barely an increase in effective population size since introduction despite an increase of four to five orders of magnitude in actual population size, suggesting that low population-genetic diversity following a bottleneck has not impeded establishment success. Landscape genomic analyses identified urban features, such as low-rise neighborhoods, that constitute pronounced barriers to gene flow. Based on our data, we consider an approach targeting the complete eradication of Javan Mynas across Singapore to be unfeasible. Instead, a mixed approach of localized mitigation measures taking into account urban geographic features and planning policy may be the most promising avenue to reducing the adverse impacts of this urban pest. Our study demonstrates how genomic methods can directly inform the management and control of invasive species, even in geographically limited datasets with high gene flow rates.

Plant species from coal mine overburden dumping site in Satui, South Kalimantan, Indonesia

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Vivi Novianti

2017-07-01

Full Text Available Coal mine overburden (OB materials were nutrient-poor, loosely adhered particles of shale, stones, boulders, and cobbles, also contained elevated concentration of trace metals. This condition cause OB substrate did not support plants growth. However, there were certain species that able to grow on overburden dumping site. This investigation sought to identify plants species that presence on coal mine overburden. The research was conducted on opencast coal mine OB dumping site in Satui, South Kalimantan. Vegetation sampling was carried out on six different ages of coal mine OB dumps (7, 10, 11, 42, 59 and 64 month using line transect. Species identification used information from local people, AMDAL report of PT Arutmin Indonesia-Satui mine project, and website. There were 123 plant species, consisted of 79 herbs (Cyperaceae, Poaceae and Asteraceae, 10 lianes, bryophyte, 9 ferns, 10 shrubs, and 14 trees. A number of Poaceae, i.e., Paspalumconjugatum, Paspalumdilatatum, and Echinochloacolona generally present among the stones, boulders, and cobbles. While Cyperaceae such as Fimbristylis miliaceae, Cyperus javanicus, Rhyncospora corymbosa and Scleria sumatrensis most often foundinand around thebasin/pond with its smooth and humid substrate characteristics. Certain species of shrubs and trees present on the 7 month OB dumping site. They wereChromolaena odorata, Clibadium surinamense, Melastoma malabathricum, Trema micrantha, and Solanum torvum (Shrubs, Ochroma pyramidale and Homalanthus populifolius (trees. This plant species could be used for accelerating primary succession purpose on coal mine overburden dumping site. Nevertheless, species selection was needed to avoid planting invasive species.

Artificial deepening of seasonal waterholes in eastern Cambodia: impact on water retention and use by large ungulates and waterbirds

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Thomas N.E. Gray

2015-05-01

Full Text Available Natural seasonal waterholes (trapeang in Khmer are an important feature of the deciduous dipterocarp forests of eastern Cambodia and are utilised by a number of globally threatened species of large ungulates and waterbirds. However at the end of the dry-season (April only a small proportion of waterholes retain water. In 2011, we artificially deepened six waterholes in the core area of Mondulkiri Protected Forest, eastern Cambodia, removing 3m3 to 24m3 of earth (mean 16.5m3 from each.  Surveys prior to deepening demonstrated that only one of these waterholes, and 10% of all waterholes surveyed in the study area (n=50, held water at the end of the dry-season.  Following modification five of the six deepened waterholes (83% held water at the end of the subsequent dry-season. From four camera traps over 448 trap-nights, 23 species including two globally threatened large ungulates, Banteng Bos javanicus and Eld’s Deer Rucervus eldii, and two Critically Endangered Ibises (Giant Thaumatibis gigantea and White-shouldered Ibis Pseudibis davisoni, were photographed foraging and drinking at the deepened waterholes between March and June 2012.  Our results suggest that artificial deepening of natural waterholes does not cause damage, and makes these waterholes suitable for use throughout the dry-season.  In the face of changing climate it is suggested that management plans should have a programme for the survey and determination of the status of waterholes every year and improve the use of water resources by artificial deepening. 

Genetic parameters on Bali cattle progeny test population

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Hariansyah, A. R.; Raharjo, A.; Zainuri, A.; Parwoto, Y.; Prasetiyo, D.; Prastowo, S.; Widyas, N.

2018-03-01

Bali cattle (Bos javanicus) is Indonesian indigenous cattle with having superior genetics potential on fitness traits in tropical environment and low feed quality. Bali Cattle Breeding Center Pulukan Indonesia conducted progeny test per annum in order to select bulls using offspring’s phenotype. This paper aimed to estimate the genetic parameters of yearling weight in Bali cattle progeny test populations and to observe the variation between periods in the above breeding center. Data were collected from the year of 2013 to 2014. There were four bulls (3 tests, 1 AI control) in 2013 and five bulls (4 tests, 1 AI) in 2014. Thirty breeding females were allocated per paddock per bull and allowed to mate naturally. In total 80 and 104 offspring’s records were obtained from 2013 and 2014 data, respectively. We built half-sib family model to estimate the additive genetic variance due to the sire and later estimate the breeding value (EBV) of each sire. Results showed that in 2013 the heritability (h2) for yearling weight was 0.19 while in 2014 was 0.79. In both years, tested bulls had higher EBV compared to the control bulls. The remarkable difference of heritability between years was due to the variations among bull candidates which might differ every year with regards to their origins. The fact that the EBV of tested bulls were higher than the control bulls gave us insight that despite the conservation policy and the continuous departure of Bali cattle bulls outside the Island, the population could still maintain its genetic quality.

An adaptable but threatened big cat: density, diet and prey selection of the Indochinese leopard (Panthera pardus delacouri) in eastern Cambodia.

Science.gov (United States)

Rostro-García, Susana; Kamler, Jan F; Crouthers, Rachel; Sopheak, Keo; Prum, Sovanna; In, Visattha; Pin, Chanratana; Caragiulo, Anthony; Macdonald, David W

2018-02-01

We studied the Indochinese leopard ( Panthera pardus delacouri ) in eastern Cambodia, in one of the few potentially remaining viable populations in Southeast Asia. The aims were to determine the: (i) current leopard density in Srepok Wildlife Sanctuary (SWS) and (ii) diet, prey selection and predation impact of leopard in SWS. The density, estimated using spatially explicit capture-recapture models, was 1.0 leopard/100 km 2 , 72% lower than an estimate from 2009 at the same site, and one of the lowest densities ever reported in Asia. Dietary analysis of 73 DNA confirmed scats showed leopard consumed 13 prey species, although ungulates comprised 87% of the biomass consumed (BC). The overall main prey (42% BC) was banteng ( Bos javanicus ), making this the only known leopard population whose main prey had adult weight greater than 500 kg. Consumption of wild pig ( Sus scrofa ) was also one of the highest ever reported (22% BC), indicating leopard consistently predated on ungulates with some of the largest adult weights in SWS. There were important differences in diet and prey selection between sexes, as males consumed mostly banteng (62% BC) in proportion to availability, but few muntjac ( Muntiacus vaginalis ; 7% BC), whereas females selectively consumed muntjac (56% BC) and avoided banteng (less than 1% BC). Predation impact was low (0.5-3.2% of populations) for the three ungulate species consumed. We conclude that the Indochinese leopard is an important apex predator in SWS, but this unique population is declining at an alarming rate and will soon be eradicated unless effective protection is provided.

Potential Application of Shallow Bed Wetland Roof systems for green urban cities

Science.gov (United States)

Bui, X. T.

2016-12-01

This study aims to investigate the growth, nutrient uptake, domestic wastewater treatment, green (leaf) area and heat reduction of four shallow subsurface flow wetland roof (WR) systems with four different new local plants. Selected species included Cyperus Javanicus Hot (WR1), Eleusine Indica (L.) Gaertn (WR2), Struchium Sparganophorum (L.) Kuntze (WR3) and Kyllinga Brevifolia Rottb (WR4). These systems were operated during 61 days at hydraulic loading rates of 353 - 403 m3/ha.day. The biomass growth of 4.9-73.7g fresh weight/day, and 0.8-11.4 g dry weight/day were observed. The nutrient accumulation according to dry biomass achieved 0.25-2.14% of total nitrogen (TN) and 0.13-1.07% of total phosphorus (TP). The average COD, TN and TP removal was 61-79%; 54-81% and 62-83%, which corresponding to 27-33 kg COD/ha.day, 10-14 kg TN/ha.day and 0.4-0.5 kg TP/ha.day, respectively. The WR4 system achieved the highest COD and TN removal among the WRs. The TP removal efficiency showed an insignificant difference for the systems. Consequently, the treated water quality complied with the Vietnam standard limits (QCVN 14:2008, level B). The green area of the four plants varied between 63-92 m2 green leaf/m2 WR. The WR4 was the highest green area. Moreover, the results also showed the temperature under the flat roof was 1-3°C lower than that of the ambient air. In summary, wetland roof is a promising technology, which not only owns the effective domestic wastewater treatment capacity, but also contributes to green urban with several above benefits.

Comparing seeds germination of some local plant species on two hydroseeding mulches for post mining revegetation

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M F Anshari

2018-01-01

Full Text Available The aims of this study were to determine seed germination rate of some local plant species in two hydroseeding mulches containing different tackifier concentration, as well as to determine the optimal hydroseeding mulch media composition for germinating seeds. This study used seeds of 13 local plant species: two species of Cyperaceae (Cyperus brevifolius, C. javanicus, five species of Leguminosae (Cajanus cajan, Crotalaria pallida, Sesbania grandiflora, S. sesban, Tephrosia purpurea, and six species of Poaceae (Eleusine indica, Paspalum conjugatum, Sorghum timorense, S. bicolor, Sporobolus indicus, Themeda arundinaceae. Two hydroseeding mulch media with different tackifier composition were mixed with seeds of each species and then sowed in pots. Each treatment was repeated three times. Moistened cotton wool was used as control and comparative media for observing seed viability. Seed germination in mulch media was observed during 13 days. The results showed that only 8 of 13 species could be germinated: S. indicus, S. timorense, T. arundinaceae, C. cajan, C. pallida, S. grandiflora, S. sesban, and T. purpurea. The highest germination rate was shown by S. sesban (67% in M2 medium and the lowest one was shown by T. arundinaceae (2% in both media. The fastest germination time was recorded for C. pallida and S. sesban seeds that germinated in 2 days after sowing (DAS in both media, while S. timorense and T. arundinaceae seeds showed the lowest ones in 11 DAS. The fluid M1 medium was optimal for seeds germination of S. sesban (50% and S. grandiflora (35%, while the thicker M2 medium was optimal for seeds germination of S. sesban (67% and S. timorense (50% in 13 DAS. The maximum germination rate was generally reached in 11 DAS.

Ciguatoxin enhances quantal transmitter release from frog motor nerve terminals.

Science.gov (United States)

Molgó, J.; Comella, J. X.; Legrand, A. M.

1990-01-01

1. Ciguatoxin (CTX), a marine toxin produced by the benthic dinoflagellate Gambierdiscus toxicus, is responsible for a complex endemic disease in man known as ciguatera fish poisoning. In the present study we have investigated the effects of purified CTX extracted for Gymnothorax javanicus moray-eel liver on frog isolated neuromuscular preparations with conventional electrophysiological techniques. 2. CTX (1-2.5 nM) applied to cutaneous pectoris nerve-muscle preparations induced, after a short delay, spontaneous fibrillations of the muscle fibres that could be suppressed with 1 microM tetrodotoxin (TTX) or by formamide to uncouple excitation-contraction. 3. In preparations treated with formamide, CTX (1-2.5 nM) caused either spontaneous or repetitive muscle action potentials (up to frequencies of 60-100 Hz) in response to a single nerve stimulus. Recordings performed at extrajunctional regions of the muscle membrane revealed that during the repetitive firing a prolongation of the repolarizing phase of the action potential occurred. At junctional sites the repetitive action potentials were triggered by repetitive endplate potentials (e.p.ps). 4. CTX (2.5 nM) caused a TTX-sensitive depolarization of the muscle membrane. 5. In junctions equilibrated in solutions containing high Mg2+ + low Ca2+, addition of CTX (1.5 nM) first induced an average increase of 239 +/- 36% in the mean quantal content of e.p.ps. Subsequently CTX reduced and finally blocked nerve-evoked transmitter release irreversibly. 6. CTX (1.5-2.5 nM) increased the frequency of miniature endplate potentials (m.e.p.ps) in junctions bathed either in normal Ringer, low Ca2(+)-high Mg2+ medium or in a nominally Ca2(+)-free solution containing EGTA.2+ Extensive washing with toxin-free solutions did not reverse the effect.(ABSTRACT TRUNCATED AT 250 WORDS) PMID:1972891

Knocking on Heaven's Door: Are Novel Invaders Necessarily Facing Naïve Native Species on Islands?

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Agathe Gérard

Full Text Available The impact of alien predator species on insular native biota has often been attributed to island prey naïveté (i.e. lack of, or inefficient, anti-predator behavior. Only rarely, however, has the concept of island prey naïveté been tested, and then only a posteriori (i.e. hundreds or thousands of years after alien species introduction. The presence of native or anciently introduced predators or competitors may be crucial for the recognition and development of adaptive behavior toward unknown predators or competitors of the same archetype (i.e. a set of species that occupy a similar ecological niche and show similar morphological and behavioral traits when interacting with other species. Here, we tested whether two squamates endemic to New Caledonia, a skink, Caledoniscincus austrocaledonicus, and a gecko, Bavayia septuiclavis, recognized and responded to the odor of two major invaders introduced into the Pacific islands, but not yet into New Caledonia. We chose one predator, the small Indian mongoose Herpestes javanicus and one competitor, the cane toad Rhinella marina, which belong respectively to the same archetype as the following two species already introduced into New Caledonia in the nineteenth century: the feral cat Felis catus and the golden bell frog Litoria aurea. Our experiment reveals that geckos are naïve with respect to the odors of both an unknown predator and an unknown competitor, as well as to the odors of a predator and a competitor they have lived with for centuries. In contrast, skinks seem to have lost some naïveté regarding the odor of a predator they have lived with for centuries and seem "predisposed" to avoid the odor of an unknown potential competitor. These results indicate that insular species living in contact with invasive alien species for centuries may be, although not systematically, predisposed toward developing adaptive behavior with respect to species belonging to the same archetype and introduced into