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Sample records for mountain endolithic microbial

  1. Microbial community composition and endolith colonization at an Arctic thermal spring are driven by calcite precipitation

    Science.gov (United States)

    Starke, Verena; Kirshtein, Julie; Fogel, Marilyn L.; Steele, Andrew

    2013-01-01

    Environmental conditions shape community composition. Arctic thermal springs provide an opportunity to study how environmental gradients can impose strong selective pressures on microbial communities and provide a continuum of niche opportunities. We use microscopic and molecular methods to conduct a survey of microbial community composition at Troll Springs on Svalbard, Norway, in the high Arctic. Microorganisms there exist under a wide range of environmental conditions: in warm water as periphyton, in moist granular materials, and in cold, dry rock as endoliths. Troll Springs has two distinct ecosystems, aquatic and terrestrial, together in close proximity, with different underlying environmental factors shaping each microbial community. Periphyton are entrapped during precipitation of calcium carbonate from the spring's waters, providing microbial populations that serve as precursors for the development of endolithic communities. This process differs from most endolith colonization, in which the rock predates the communities that colonize it. Community composition is modulated as environmental conditions change within the springs. At Troll, the aquatic environments show a small number of dominant operational taxonomic units (OTUs) that are specific to each sample. The terrestrial environments show a more even distribution of OTUs common to multiple samples.

  2. Diversity and stability of coral endolithic microbial communities at a naturally high pCO2 reef.

    Science.gov (United States)

    Marcelino, Vanessa Rossetto; Morrow, Kathleen M; van Oppen, Madeleine J H; Bourne, David G; Verbruggen, Heroen

    2017-10-01

    The health and functioning of reef-building corals is dependent on a balanced association with prokaryotic and eukaryotic microbes. The coral skeleton harbours numerous endolithic microbes, but their diversity, ecological roles and responses to environmental stress, including ocean acidification (OA), are not well characterized. This study tests whether pH affects the diversity and structure of prokaryotic and eukaryotic algal communities associated with skeletons of Porites spp. using targeted amplicon (16S rRNA gene, UPA and tufA) sequencing. We found that the composition of endolithic communities in the massive coral Porites spp. inhabiting a naturally high pCO 2 reef (avg. pCO 2 811 μatm) is not significantly different from corals inhabiting reference sites (avg. pCO 2 357 μatm), suggesting that these microbiomes are less disturbed by OA than previously thought. Possible explanations may be that the endolithic microhabitat is highly homeostatic or that the endolithic micro-organisms are well adapted to a wide pH range. Some of the microbial taxa identified include nitrogen-fixing bacteria (Rhizobiales and cyanobacteria), algicidal bacteria in the phylum Bacteroidetes, symbiotic bacteria in the family Endozoicomoniaceae, and endolithic green algae, considered the major microbial agent of reef bioerosion. Additionally, we test whether host species has an effect on the endolithic community structure. We show that the endolithic community of massive Porites spp. is substantially different and more diverse than that found in skeletons of the branching species Seriatopora hystrix and Pocillopora damicornis. This study reveals highly diverse and structured microbial communities in Porites spp. skeletons that are possibly resilient to OA. © 2017 John Wiley & Sons Ltd.

  3. Molecular Analysis of Endolithic Microbial Communities in Volcanic Glasses

    Science.gov (United States)

    di Meo, C. A.; Giovannoni, S.; Fisk, M.

    2002-12-01

    Terrestrial and marine volcanic glasses become mineralogically and chemically altered, and in many cases this alteration has been attributed to microbial activity. We have used molecular techniques to study the resident microbial communities from three different volcanic environments that may be responsible for this crustal alteration. Total microbial DNA was extracted from rhyolite glass of the 7 million year old Rattlesnake Tuff in eastern Oregon. The DNA was amplified using the polymerase chain reaction (PCR) with bacterial primers targeting the 16S rRNA gene. This 16S rDNA was cloned and screened with restriction fragment length polymorphism (RFLP). Out of 89 total clones screened, 46 belonged to 13 different clone families containing two or more members, while 43 clones were unique. Sequences of eight clones representing the most dominant clone families in the library were 92 to 97% similar to soil bacterial species. In a separate study, young pillow basalts (rock- and seawater-associated archaea. The six rock community profiles were quite similar to each other, and the background water communities were also similar, respectively. Both the rock and water communities shared the same dominant peak. To identify the T-RFLP peaks corresponding to the individual members of the rock and seawater communities, clone libraries of the archaeal 16S rDNA for one basalt sample (Dive 3718) and its corresponding background water sample were constructed. The most abundant archaeal genes were closely related to uncultured Group I marine Crenarchaeota that have been previously identified from similar deep-sea habitats. These archaeal genes collectively correspond to the dominant T-RFLP peak present in both the rock and water samples. In a third study, we investigated the microbial community residing in a Hawaiian Scientific Drilling Program core collected near Hilo, Hawaii. Total microbial DNA was extracted from a depth of 1351 m in the drill core (ambient temperature in the

  4. Fundamental drivers for endolithic microbial community assemblies in the hyperarid Atacama Desert.

    Science.gov (United States)

    Meslier, Victoria; Casero, M Cristina; Dailey, Micah; Wierzchos, Jacek; Ascaso, Carmen; Artieda, Octavio; McCullough, P R; DiRuggiero, Jocelyne

    2018-03-24

    In hyperarid deserts, endolithic microbial communities colonize the rocks' interior as a survival strategy. Yet, the composition of these communities and the drivers promoting their assembly are still poorly understood. We analysed the diversity and community composition of endoliths from four different lithic substrates - calcite, gypsum, ignimbrite and granite - collected in the hyperarid zone of the Atacama Desert, Chile. By combining microscopy, mineralogy, spectroscopy and high throughput sequencing, we found these communities to be highly specific to their lithic substrate, although they were all dominated by the same four main phyla, Cyanobacteria, Actinobacteria, Chloroflexi and Proteobacteria. Our finding indicates a fine scale diversification of the microbial reservoir driven by substrate properties. The data suggest that the overall rock chemistry and the light transmission properties of the substrates are not essential drivers of community structure and composition. Instead, we propose that the architecture of the rock, i.e., the space available for colonization and its physical structure, linked to water retention capabilities, is ultimately the driver of community diversity and composition at the dry limit of life. © 2018 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

  5. In situ metabolism in halite endolithic microbial communities of the hyperarid Atacama Desert

    Directory of Open Access Journals (Sweden)

    Alfonso F Davila

    2015-10-01

    Full Text Available The Atacama Desert of northern Chile is one of the driest regions on Earth, with areas that exclude plants and where soils have extremely low microbial biomass. However, in the driest parts of the desert there are microorganisms that colonize the interior of halite nodules in fossil continental evaporites, where they are sustained by condensation of atmospheric water triggered by the salt substrate. Using a combination of in situ observations of variable chlorophyll fluorescence and controlled laboratory experiments, we show that this endolithic community is capable of carbon fixation both through oxygenic photosynthesis and potentially ammonia oxidation. We also present evidence that photosynthetic activity is finely tuned to moisture availability and solar insolation and can be sustained for days, and perhaps longer, after a wetting event. This is the first demonstration of in situ active metabolism in the hyperarid core of the Atacama Desert, and it provides the basis for proposing a self-contained, endolithic community that relies exclusively on non-rainfall sources of water. Our results contribute to an increasing body of evidence that even in hyperarid environments active metabolism, adaptation and growth can occur in highly specialized microhabitats.

  6. Endolithic Microbial Life in Extreme Cold Climate: Snow Is Required, but Perhaps Less Is More

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    Henry J. Sun

    2013-04-01

    Full Text Available Cyanobacteria and lichens living under sandstone surfaces in the McMurdo Dry Valleys require snow for moisture. Snow accumulated beyond a thin layer, however, is counterproductive, interfering with rock insolation, snow melting, and photosynthetic access to light. With this in mind, the facts that rock slope and direction control colonization, and that climate change results in regional extinctions, can be explained. Vertical cliffs, which lack snow cover and are perpetually dry, are devoid of organisms. Boulder tops and edges can trap snow, but gravity and wind prevent excessive buildup. There, the organisms flourish. In places where snow-thinning cannot occur and snow drifts collect, rocks may contain living or dead communities. In light of these observations, the possibility of finding extraterrestrial endolithic communities on Mars cannot be eliminated.

  7. Microbial activity at Yucca Mountain

    International Nuclear Information System (INIS)

    Horn, J.M.; Meike, A.

    1995-01-01

    The U.S. Department of Energy is engaged in a suitability study for a potential geological repository at Yucca Mountain, Nevada, for the containment and storage of commercially generated spent fuel and defense high-level nuclear waste. There is growing recognition of the role that biotic factors could play in this repository, either directly through microbially induced corrosion (MIC), or indirectly by altering the chemical environment or contributing to the transport of radionuclides. As a first step toward describing and predicting these processes, a workshop was held on April 10-12, 1995, in Lafayette, California. The immediate aims of the workshop were: (1) To identify microbially related processes relevant to the design of a radioactive waste repository under conditions similar to those at Yucca Mountain. (2) To determine parameters that are critical to the evaluation of a disturbed subterranean environment. (3) To define the most effective means of investigating the factors thus identified

  8. Microbial activity at Yucca Mountain

    Energy Technology Data Exchange (ETDEWEB)

    Horn, J.M.; Meike, A.

    1995-09-25

    The U.S. Department of Energy is engaged in a suitability study for a potential geological repository at Yucca Mountain, Nevada, for the containment and storage of commercially generated spent fuel and defense high-level nuclear waste. There is growing recognition of the role that biotic factors could play in this repository, either directly through microbially induced corrosion (MIC), or indirectly by altering the chemical environment or contributing to the transport of radionuclides. As a first step toward describing and predicting these processes, a workshop was held on April 10-12, 1995, in Lafayette, California. The immediate aims of the workshop were: (1) To identify microbially related processes relevant to the design of a radioactive waste repository under conditions similar to those at Yucca Mountain. (2) To determine parameters that are critical to the evaluation of a disturbed subterranean environment. (3) To define the most effective means of investigating the factors thus identified.

  9. Endolithic microbial communities in carbonate precipitates from serpentinite-hosted hyperalkaline springs of the Voltri Massif (Ligurian Alps, Northern Italy).

    Science.gov (United States)

    Quéméneur, Marianne; Palvadeau, Alexandra; Postec, Anne; Monnin, Christophe; Chavagnac, Valérie; Ollivier, Bernard; Erauso, Gaël

    2015-09-01

    The Voltri Massif is an ophiolitic complex located in the Ligurian Alps close to the city of Genova (Northern Italy) where several springs discharge high pH (up to 11.7), low salinity waters produced by the active serpentinization of the ultramafic basement. Mixing of these hyperalkaline waters with the river waters along with the uptake of atmospheric carbon dioxide forms brownish carbonate precipitates covering the bedrock at the springs. Diverse archaeal and bacterial communities were detected in these carbonate precipitates using 454 pyrosequencing analyses of 16S ribosomal RNA (rRNA) genes. Archaeal communities were dominated by members of potential methane-producing and/or methane-oxidizing Methanobacteriales and Methanosarcinales (Euryarchaeota) together with ammonia-oxidizing Nitrososphaerales (Thaumarchaeota) similar to those found in other serpentinization-driven submarine and terrestrial ecosystems. Bacterial communities consisted of members of the Proteobacteria, Actinobacteria, Planctomycetes, Bacteroidetes, Chloroflexi, and Verrucomicrobia phyla, altogether accounting for 92.2% of total retrieved bacterial 16S rRNA gene sequences. Amongst Bacteria, potential chemolithotrophy was mainly associated with Alpha- and Betaproteobacteria classes, including nitrogen-fixing, methane-oxidizing or hydrogen-oxidizing representatives of the genera Azospirillum, Methylosinus, and Hydrogenophaga/'Serpentinomonas', respectively. Besides, potential chemoorganotrophy was attributed mainly to representatives of Actinobacteria and Planctomycetales phyla. The reported 16S rRNA gene data strongly suggested that hydrogen, methane, and nitrogen-based chemolithotrophy can sustain growth of the microbial communities inhabiting the carbonate precipitates in the hyperalkaline springs of the Voltri Massif, similarly to what was previously observed in other serpentinite-hosted ecosystems.

  10. Epilithic and endolithic bacterial communities in limestone from a Maya archaeological site.

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    McNamara, Christopher J; Perry, Thomas D; Bearce, Kristen A; Hernandez-Duque, Guillermo; Mitchell, Ralph

    2006-01-01

    Biodeterioration of archaeological sites and historic buildings is a major concern for conservators, archaeologists, and scientists involved in preservation of the world's cultural heritage. The Maya archaeological sites in southern Mexico, some of the most important cultural artifacts in the Western Hemisphere, are constructed of limestone. High temperature and humidity have resulted in substantial microbial growth on stone surfaces at many of the sites. Despite the porous nature of limestone and the common occurrence of endolithic microorganisms in many habitats, little is known about the microbial flora living inside the stone. We found a large endolithic bacterial community in limestone from the interior of the Maya archaeological site Ek' Balam. Analysis of 16S rDNA clones demonstrated disparate communities (endolithic: >80% Actinobacteria, Acidobacteria, and Low GC Firmicutes; epilithic: >50% Proteobacteria). The presence of differing epilithic and endolithic bacterial communities may be a significant factor for conservation of stone cultural heritage materials and quantitative prediction of carbonate weathering.

  11. Endolithic phototrophs in built and natural stone.

    Science.gov (United States)

    Gaylarde, Christine C; Gaylarde, Peter M; Neilan, Brett A

    2012-08-01

    Lichens, algae and cyanobacteria have been detected growing endolithically in natural rock and in stone buildings in various countries of Australasia, Europe and Latin America. Previously these organisms had mainly been described in natural carbonaceous rocks in aquatic environments, with some reports in siliceous rocks, principally from extremophilic regions. Using various culture and microscopy methods, we have detected endoliths in siliceous stone, both natural and cut, in humid temperate and subtropical climates. Such endolithic growth leads to degradation of the stone structure, not only by mechanical means, but also by metabolites liberated by the cells. Using in vitro culture, transmission, optical and fluorescence microscopy, and confocal laser scanning microscopy, both coccoid and filamentous cyanobacteria and algae, including Cyanidiales, have been identified growing endolithically in the facades of historic buildings built from limestone, sandstone, granite, basalt and soapstone, as well as in some natural rocks. Numerically, the most abundant are small, single-celled, colonial cyanobacteria. These small phototrophs are difficult to detect by standard microscope techniques and some of these species have not been previously reported within stone.

  12. Novel water source for endolithic life in the hyperarid core of the Atacama Desert

    Directory of Open Access Journals (Sweden)

    J. Wierzchos

    2012-06-01

    Full Text Available The hyperarid core of the Atacama Desert, Chile, is possibly the driest and most life-limited place on Earth, yet endolithic microorganisms thrive inside halite pinnacles that are part of ancient salt flats. The existence of this microbial community in an environment that excludes any other life forms suggests biological adaptation to high salinity and desiccation stress, and indicates an alternative source of water for life other than rainfall, fog or dew. Here, we show that halite endoliths obtain liquid water through spontaneous capillary condensation at relative humidity (RH much lower than the deliquescence RH of NaCl. We describe how this condensation could occur inside nano-pores smaller than 100 nm, in a newly characterized halite phase that is intimately associated with the endolithic aggregates. This nano-porous phase helps retain liquid water for long periods of time by preventing its evaporation even in conditions of utmost dryness. Our results explain how life has colonized and adapted to one of the most extreme environments on our planet, expanding the water activity envelope for life on Earth, and broadening the spectrum of possible habitats for life beyond our planet.

  13. Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland).

    Science.gov (United States)

    Trampe, Erik; Castenholz, Richard W; Larsen, Jens E N; Kühl, Michael

    2017-11-01

    Marine tufa-columns, formed by the hydrated carbonate mineral ikaite, present a unique alkaline microbial habitat only found in Ikka Fjord (SW-Greenland). The outermost parts of the ikaite columns exhibit a multitude of physico-chemical gradients, and the porous ikaite is colonized by endolithic phototrophic biofilms serving as a substrate for grazing epifauna, where scraping by sea urchins affects overall column-topography. We present a detailed study of the optical microenvironment, spatial organization, and photosynthetic activity of endolithic phototrophs within the porous ikaite crystal matrix. Cyanobacteria and diatoms formed distinctly coloured zones and were closely associated with ikaite-crystals via excretion of exopolymers. Scalar-irradiance measurements showed strong attenuation of visible light (400-700 nm), where only ∼1% of incident irradiance remained at 20 mm depth. Transmission spectra showed in vivo absorption signatures of diatom and cyanobacterial photopigments, which were confirmed by HPLC-analysis. Variable-chlorophyll-fluorescence-imaging showed active photosynthesis with high-light acclimation in the outer diatom layer, and low-light acclimation in the underlying cyanobacterial part. Phototrophs in ikaite thus thrive in polymer-bound endolithic biofilms in a complex gradient microhabitat experiencing constant slow percolation of highly alkaline phosphate-enriched spring water mixing with cold seawater at the tufa-column-apex. We discuss the potential role of these biofilms in ikaite column formation. © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.

  14. Structure of pelagic microbial assemblages in European mountain lakes during ice-free season

    Czech Academy of Sciences Publication Activity Database

    Straškrábová, Viera; Bertoni, R.; Blažo, M.; Callieri, C.; Forsström, L.; Fott, J.; Kernan, M.; Macek, Miroslav; Stuchlík, E.; Tolotti, M.

    2009-01-01

    Roč. 62, - (2009), s. 19-53 ISSN 1612-166X Grant - others:EU MOLAR(CZ) ENV4-CT95-0007; EU EMERGE(CZ) EVK1-CT-1999-00032 Institutional research plan: CEZ:AV0Z60170517; CEZ:AV0Z6017912 Keywords : plankton * mountain lakes * microbial loop Subject RIV: EH - Ecology, Behaviour

  15. Microbial eukaryote plankton communities of high-mountain lakes from three continents exhibit strong biogeographic patterns.

    Science.gov (United States)

    Filker, Sabine; Sommaruga, Ruben; Vila, Irma; Stoeck, Thorsten

    2016-05-01

    Microbial eukaryotes hold a key role in aquatic ecosystem functioning. Yet, their diversity in freshwater lakes, particularly in high-mountain lakes, is relatively unknown compared with the marine environment. Low nutrient availability, low water temperature and high ultraviolet radiation make most high-mountain lakes extremely challenging habitats for life and require specific molecular and physiological adaptations. We therefore expected that these ecosystems support a plankton diversity that differs notably from other freshwater lakes. In addition, we hypothesized that the communities under study exhibit geographic structuring. Our rationale was that geographic dispersal of small-sized eukaryotes in high-mountain lakes over continental distances seems difficult. We analysed hypervariable V4 fragments of the SSU rRNA gene to compare the genetic microbial eukaryote diversity in high-mountain lakes located in the European Alps, the Chilean Altiplano and the Ethiopian Bale Mountains. Microbial eukaryotes were not globally distributed corroborating patterns found for bacteria, multicellular animals and plants. Instead, the plankton community composition emerged as a highly specific fingerprint of a geographic region even on higher taxonomic levels. The intraregional heterogeneity of the investigated lakes was mirrored in shifts in microbial eukaryote community structure, which, however, was much less pronounced compared with interregional beta-diversity. Statistical analyses revealed that on a regional scale, environmental factors are strong predictors for plankton community structures in high-mountain lakes. While on long-distance scales (>10 000 km), isolation by distance is the most plausible scenario, on intermediate scales (up to 6000 km), both contemporary environmental factors and historical contingencies interact to shift plankton community structures. © 2016 John Wiley & Sons Ltd.

  16. Preserved filamentous microbial biosignatures in the Brick Flat gossan, Iron Mountain, California

    Science.gov (United States)

    Williams, Amy J.; Sumner, Dawn Y.; Alpers, Charles N.; Karunatillake, Suniti; Hofmann, Beda A

    2015-01-01

    A variety of actively precipitating mineral environments preserve morphological evidence of microbial biosignatures. One such environment with preserved microbial biosignatures is the oxidized portion of a massive sulfide deposit, or gossan, such as that at Iron Mountain, California. This gossan may serve as a mineralogical analogue to some ancient martian environments due to the presence of oxidized iron and sulfate species, and minerals that only form in acidic aqueous conditions, in both environments. Evaluating the potential biogenicity of cryptic textures in such martian gossans requires an understanding of how microbial textures form biosignatures on Earth. The iron-oxide-dominated composition and morphology of terrestrial, nonbranching filamentous microbial biosignatures may be distinctive of the underlying formation and preservation processes. The Iron Mountain gossan consists primarily of ferric oxide (hematite), hydrous ferric oxide (HFO, predominantly goethite), and jarosite group minerals, categorized into in situ gossan, and remobilized iron deposits. We interpret HFO filaments, found in both gossan types, as HFO-mineralized microbial filaments based in part on (1) the presence of preserved central filament lumina in smooth HFO mineral filaments that are likely molds of microbial filaments, (2) mineral filament formation in actively precipitating iron-oxide environments, (3) high degrees of mineral filament bending consistent with a flexible microbial filament template, and (4) the presence of bare microbial filaments on gossan rocks. Individual HFO filaments are below the resolution of the Mars Curiosity and Mars 2020 rover cameras, but sinuous filaments forming macroscopic matlike textures are resolvable. If present on Mars, available cameras may resolve these features identified as similar to terrestrial HFO filaments and allow subsequent evaluation for their biogenicity by synthesizing geochemical, mineralogical, and morphological analyses. Sinuous

  17. Endolithic chlorophyll d-containing phototrophs

    DEFF Research Database (Denmark)

    Behrendt, Lars; Larkum, Anthony W D; Norman, Anders

    2011-01-01

    hyperspectral and variable chlorophyll fluorescence imaging, scanning electron microscopy, photopigment analysis and DNA sequencing to show that Acaryochloris-like cyanobacteria thrive underneath crustose coralline algae in a widespread endolithic habitat on coral reefs. This finding suggests an important role...

  18. Microbial ecology of mountain glacier ecosystems: biodiversity, ecological connections and implications of a warming climate.

    Science.gov (United States)

    Hotaling, Scott; Hood, Eran; Hamilton, Trinity L

    2017-08-01

    Glacier ecosystems are teeming with life on, beneath, and to a lesser degree, within their icy masses. This conclusion largely stems from polar research, with less attention paid to mountain glaciers that overlap environmentally and ecologically with their polar counterparts in some ways, but diverge in others. One difference lies in the susceptibility of mountain glaciers to the near-term threat of climate change, as they tend to be much smaller in both area and volume. Moreover, mountain glaciers are typically steeper, more dependent upon basal sliding for movement, and experience higher seasonal precipitation. Here, we provide a modern synthesis of the microbial ecology of mountain glacier ecosystems, and particularly those at low- to mid-latitudes. We focus on five ecological zones: the supraglacial surface, englacial interior, subglacial bedrock-ice interface, proglacial streams and glacier forefields. For each, we discuss the role of microbiota in biogeochemical cycling and outline ecological and hydrological connections among zones, underscoring the interconnected nature of these ecosystems. Collectively, we highlight the need to: better document the biodiversity and functional roles of mountain glacier microbiota; describe the ecological implications of rapid glacial retreat under climate change and resolve the relative contributions of ecological zones to broader ecosystem function. © 2017 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

  19. Dramatic Increases of Soil Microbial Functional Gene Diversity at the Treeline Ecotone of Changbai Mountain.

    Science.gov (United States)

    Shen, Congcong; Shi, Yu; Ni, Yingying; Deng, Ye; Van Nostrand, Joy D; He, Zhili; Zhou, Jizhong; Chu, Haiyan

    2016-01-01

    The elevational and latitudinal diversity patterns of microbial taxa have attracted great attention in the past decade. Recently, the distribution of functional attributes has been in the spotlight. Here, we report a study profiling soil microbial communities along an elevation gradient (500-2200 m) on Changbai Mountain. Using a comprehensive functional gene microarray (GeoChip 5.0), we found that microbial functional gene richness exhibited a dramatic increase at the treeline ecotone, but the bacterial taxonomic and phylogenetic diversity based on 16S rRNA gene sequencing did not exhibit such a similar trend. However, the β-diversity (compositional dissimilarity among sites) pattern for both bacterial taxa and functional genes was similar, showing significant elevational distance-decay patterns which presented increased dissimilarity with elevation. The bacterial taxonomic diversity/structure was strongly influenced by soil pH, while the functional gene diversity/structure was significantly correlated with soil dissolved organic carbon (DOC). This finding highlights that soil DOC may be a good predictor in determining the elevational distribution of microbial functional genes. The finding of significant shifts in functional gene diversity at the treeline ecotone could also provide valuable information for predicting the responses of microbial functions to climate change.

  20. Dramatic increases of soil microbial functional gene diversity at the treeline ecotone of Changbai Mountain

    Directory of Open Access Journals (Sweden)

    Congcong Shen

    2016-07-01

    Full Text Available The elevational and latitudinal diversity patterns of microbial taxa have attracted great attention in the past decade. Recently, the distribution of functional attributes has been in the spotlight. Here, we report a study profiling soil microbial communities along an elevation gradient (500 to 2200 m on Changbai Mountain. Using a comprehensive functional gene microarray (GeoChip 5.0, we found that microbial functional gene richness exhibited a dramatic increase at the treeline ecotone, but the bacterial taxonomic and phylogenetic diversity based on 16S rRNA gene sequencing did not exhibit such a similar trend. However, the β-diversity (compositional dissimilarity among sites for both bacterial taxa and functional genes was similar, showing significant elevational distance-decay patterns which presented increased dissimilarity with elevation. The bacterial taxonomic diversity/structure was strongly influenced by soil pH, while the functional gene diversity/structure was significantly correlated with soil dissolved organic carbon (DOC. This finding highlights that soil DOC may be a good predictor in determining the elevational distribution of microbial functional genes. The finding of significant shifts in functional gene diversity at the treeline ecotone could also provide valuable information for predicting the responses of microbial functions to climate change.

  1. Review of microbial responses to abiotic environmental factors in the context of the proposed Yucca Mountain repository

    Energy Technology Data Exchange (ETDEWEB)

    Meike, A [Lawrence Livermore National Lab., Livermore, CA (United States); Stroes-Gascoyne, S

    2000-10-01

    A workshop on Microbial Activities at Yucca Mountain (May 1995, Lafayette, CA) was held with the intention to compile information on all pertinent aspects of microbial activity for application to a potential repository at Yucca Mountain. The findings of this workshop set off a number of efforts intended to eventually incorporate the impacts of microbial behaviour into performance assessment models. One effort was to expand an existing modelling approach to include the distinctive characteristics of a repository at Yucca Mountain (e.g., unsaturated conditions and a significant thermal load). At the same time, a number of experimental studies were initiated as well as a compilation of relevant literature to more thoroughly study the physical, chemical and biological parameters that would affect microbial activity under Yucca Mountain-like conditions. This literature search (completed in 1996) is the subject of the present document. The collected literature can be divided into four categories, 1) abiotic factors, 2) community dynamics and in-situ considerations, 3) nutrient considerations and 4) transport of radionuclides. The complete bibliography (included in Appendix A) represents a considerable resource, but is too large to be discussed in one document. Therefore, the present report focuses on the first category, abiotic factors, and a discussion of these factors in order to facilitate the development of a model for Yucca Mountain. The first part of the report (Chapters 1-3) is a review of general microbial states, phases and requirements for growth, conditions for 'normal growth' and other types of growth, survival strategies and cell death. It contains primarily well-established ideas in microbiology. Microbial capabilities for survival and adaptation to environmental changes are examined because a repository placed at Yucca Mountain would have two effects. First, the natural environment would be perturbed by the excavation and construction of the repository and

  2. Review of microbial responses to abiotic environmental factors in the context of the proposed Yucca Mountain repository

    Energy Technology Data Exchange (ETDEWEB)

    Meike, A. [Lawrence Livermore National Lab., Livermore, CA (United States); Stroes-Gascoyne, S

    2000-10-01

    A workshop on Microbial Activities at Yucca Mountain (May 1995, Lafayette, CA) was held with the intention to compile information on all pertinent aspects of microbial activity for application to a potential repository at Yucca Mountain. The findings of this workshop set off a number of efforts intended to eventually incorporate the impacts of microbial behaviour into performance assessment models. One effort was to expand an existing modelling approach to include the distinctive characteristics of a repository at Yucca Mountain (e.g., unsaturated conditions and a significant thermal load). At the same time, a number of experimental studies were initiated as well as a compilation of relevant literature to more thoroughly study the physical, chemical and biological parameters that would affect microbial activity under Yucca Mountain-like conditions. This literature search (completed in 1996) is the subject of the present document. The collected literature can be divided into four categories, 1) abiotic factors, 2) community dynamics and in-situ considerations, 3) nutrient considerations and 4) transport of radionuclides. The complete bibliography (included in Appendix A) represents a considerable resource, but is too large to be discussed in one document. Therefore, the present report focuses on the first category, abiotic factors, and a discussion of these factors in order to facilitate the development of a model for Yucca Mountain. The first part of the report (Chapters 1-3) is a review of general microbial states, phases and requirements for growth, conditions for 'normal growth' and other types of growth, survival strategies and cell death. It contains primarily well-established ideas in microbiology. Microbial capabilities for survival and adaptation to environmental changes are examined because a repository placed at Yucca Mountain would have two effects. First, the natural environment would be perturbed by the excavation and construction of the

  3. Detection of endolithic spatial distribution in marble stone.

    Science.gov (United States)

    Casanova Municchia, A; Percario, Z; Caneva, G

    2014-10-01

    The penetration of endolithic microorganisms, which develop to depths of several millimetres or even centimetres into the stone, and the diffusion of their extracellular substances speeds up the stone deterioration process. The aim of this study was to investigate, using a confocal laser scanning microscopy with a double-staining, a marble rock sample by observing the endolithic spatial distribution and quantifying the volume they occupied within the stone, in order to understand the real impact of these microorganisms on the conservation of stone monuments. Often the only factors taken into account by biodeterioration studies regarding endolithic microorganisms, are spread and depth of penetration. Despite the knowledge of three-dimensional spatial distribution and quantification of volume, it is indispensable to understand the real damage caused by endolithic microorganisms to stone monuments. In this work, we analyze a marble rock sample using a confocal laser scanning microscopy stained with propidium iodide and Concavalin-A conjugate with the fluorophore Alexa Fluor 488, comparing these results with other techniques (SEM microscope, microphotographs of polished cross-sections and thin-section, PAS staining methods), An image analysis approach has also been applied. The use of confocal laser scanning microscopy with double staining shows clear evidence of the presence of endolithic microorganisms (cyanobacteria and fungi) as well as the extracellular polymeric substance matrix in a three-dimensional architecture as part of the rock sample, this technique, therefore, seems very useful when applied to restoration interventions on stone monuments when endolithic growth is suspected. © 2014 The Authors Journal of Microscopy © 2014 Royal Microscopical Society.

  4. Establishment of endolithic populations of extremophilic Cyanidiales (Rhodophyta).

    Science.gov (United States)

    Yoon, Hwan Su; Ciniglia, Claudia; Wu, Min; Comeron, Josep M; Pinto, Gabriele; Pollio, Antonino; Bhattacharya, Debashish

    2006-10-05

    Cyanidiales are unicellular extremophilic red algae that inhabit acidic and high temperature sites around hot springs and have also adapted to life in endolithic and interlithic habitats. Comparative genomic analysis of Cyanidioschyzon merolae and Galdieria sulphuraria predicts that the latter may be more broadly distributed in extreme environments because its genome contains membrane transporters involved in the uptake of reduced carbon compounds that are absent from C. merolae. Analysis of an endolithic site in the Phlegrean Fields near Naples, Italy is consistent with this prediction showing this population to be comprised solely of the newly described lineage Galdieria-B and C. merolae to be limited to humid habitats. Here, we conducted an environmental PCR survey of another extreme environment in Tuscany, Italy and contrasted Cyanidiales population structure at endolithic and interlithic habitats in Naples and Tuscany. We find a second Galdieria lineage (Galdieria-A) in endolithic and interlithic habitats in Tuscany but surprisingly Cyanidium was also present at these sites. The photoautotrophic Cyanidium apparently survives below the rock surface where sufficient light is available for photosynthesis. C. merolae is absent from all endolithic and interlithic sites in Tuscany. Population genetic analyses of a partial calmodulin gene fragment suggest a recent establishment or recurrent gene flow between populations in Tuscany, whereas the highly structured Galdieria-B population in Naples likely originated from 2-3 founder events. We find evidence of several recombination events across the calmodulin gene, potentially indicating the presence of sexual reproduction in the Tuscany populations. Our study provides important data regarding population structure in extreme endolithic environments and insights into how Cyanidiales may be established in and adapt to these hostile environments.

  5. Establishment of endolithic populations of extremophilic Cyanidiales (Rhodophyta

    Directory of Open Access Journals (Sweden)

    Pollio Antonino

    2006-10-01

    Full Text Available Abstract Background Cyanidiales are unicellular extremophilic red algae that inhabit acidic and high temperature sites around hot springs and have also adapted to life in endolithic and interlithic habitats. Comparative genomic analysis of Cyanidioschyzon merolae and Galdieria sulphuraria predicts that the latter may be more broadly distributed in extreme environments because its genome contains membrane transporters involved in the uptake of reduced carbon compounds that are absent from C. merolae. Analysis of an endolithic site in the Phlegrean Fields near Naples, Italy is consistent with this prediction showing this population to be comprised solely of the newly described lineage Galdieria-B and C. merolae to be limited to humid habitats. Here, we conducted an environmental PCR survey of another extreme environment in Tuscany, Italy and contrasted Cyanidiales population structure at endolithic and interlithic habitats in Naples and Tuscany. Results We find a second Galdieria lineage (Galdieria-A in endolithic and interlithic habitats in Tuscany but surprisingly Cyanidium was also present at these sites. The photoautotrophic Cyanidium apparently survives below the rock surface where sufficient light is available for photosynthesis. C. merolae is absent from all endolithic and interlithic sites in Tuscany. Population genetic analyses of a partial calmodulin gene fragment suggest a recent establishment or recurrent gene flow between populations in Tuscany, whereas the highly structured Galdieria-B population in Naples likely originated from 2–3 founder events. We find evidence of several recombination events across the calmodulin gene, potentially indicating the presence of sexual reproduction in the Tuscany populations. Conclusion Our study provides important data regarding population structure in extreme endolithic environments and insights into how Cyanidiales may be established in and adapt to these hostile environments.

  6. Effects of vegetation type on microbial biomass carbon and nitrogen in subalpine mountain forest soils.

    Science.gov (United States)

    Ravindran, Anita; Yang, Shang-Shyng

    2015-08-01

    Microbial biomass plays an important role in nutrient transformation and conservation of forest and grassland ecosystems. The objective of this study was to determine the microbial biomass among three vegetation types in subalpine mountain forest soils of Taiwan. Tatachia is a typical high-altitude subalpine temperate forest ecosystem in Taiwan with an elevation of 1800-3952 m and consists of three vegetation types: spruce, hemlock, and grassland. Three plots were selected in each vegetation type. Soil samples were collected from the organic layer, topsoil, and subsoil. Microbial biomass carbon (Cmic) was determined by the chloroform fumigation-extraction method, and microbial biomass nitrogen (Nmic) was determined from the total nitrogen (Ntot) released during fumigation-extraction. Bacteria, actinomycetes, fungi, cellulolytic microbes, phosphate-solubilizing microbes, and nitrogen-fixing microbes were also counted. The Cmic and Nmic were highest in the surface soil and declined with the soil depth. These were also highest in spruce soils, followed by in hemlock soils, and were lowest in grassland soils. Cmic and Nmic had the highest values in the spring season and the lowest values in the winter season. Cmic and Nmic had significantly positive correlations with total organic carbon (Corg) and Ntot. Contributions of Cmic and Nmic, respectively, to Corg and Ntot indicated that the microbial biomass was immobilized more in spruce and hemlock soils than in grassland soils. Microbial populations of the tested vegetation types decreased with increasing soil depth. Cmic and Nmic were high in the organic layer and decreased with the depth of layers. These values were higher for spruce and hemlock soils than for grassland soils. Positive correlations were observed between Cmic and Nmic and between Corg and Ntot. Copyright © 2014. Published by Elsevier B.V.

  7. Review of Microbial Responses to Abiotic Environmental Factors in the Context of the Proposed Yucca Mountain Repository

    International Nuclear Information System (INIS)

    Meike, A.; Stroes-Gascoyne, S.

    2000-01-01

    A workshop on Microbial Activities at Yucca Mountain (May 1995, Lafayette, CA) was held with the intention to compile information on all pertinent aspects of microbial activity for application to a potential repository at Yucca Mountain. The findings of this workshop set off a number of efforts intended to eventually incorporate the impacts of microbial behavior into performance assessment models. One effort was to expand an existing modeling approach to include the distinctive characteristics of a repository at Yucca Mountain (e.g., unsaturated conditions and a significant thermal load). At the same time, a number of experimental studies were initiated as well as a compilation of relevant literature to more thoroughly study the physical, chemical and biological parameters that would affect microbial activity under Yucca Mountain-like conditions. This literature search (completed in 1996) is the subject of the present document. The collected literature can be divided into four categories: (1) abiotic factors, (2) community dynamics and in-situ considerations, (3) nutrient considerations and (4) transport of radionuclides. The complete bibliography represents a considerable resource, but is too large to be discussed in one document. Therefore, the present report focuses on the first category, abiotic factors, and a discussion of these factors in order to facilitate the development of a model for Yucca Mountain

  8. Microbial oxidation of lithospheric organic carbon in rapidly eroding tropical mountain soils.

    Science.gov (United States)

    Hemingway, Jordon D; Hilton, Robert G; Hovius, Niels; Eglinton, Timothy I; Haghipour, Negar; Wacker, Lukas; Chen, Meng-Chiang; Galy, Valier V

    2018-04-13

    Lithospheric organic carbon ("petrogenic"; OC petro ) is oxidized during exhumation and subsequent erosion of mountain ranges. This process is a considerable source of carbon dioxide (CO 2 ) to the atmosphere over geologic time scales, but the mechanisms that govern oxidation rates in mountain landscapes are poorly constrained. We demonstrate that, on average, 67 ± 11% of the OC petro initially present in bedrock exhumed from the tropical, rapidly eroding Central Range of Taiwan is oxidized in soils, leading to CO 2 emissions of 6.1 to 18.6 metric tons of carbon per square kilometer per year. The molecular and isotopic evolution of bulk OC and lipid biomarkers during soil formation reveals that OC petro remineralization is microbially mediated. Rapid oxidation in mountain soils drives CO 2 emission fluxes that increase with erosion rate, thereby counteracting CO 2 drawdown by silicate weathering and biospheric OC burial. Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

  9. Oil hyphae of endolithic lichens and their fatty acid composition

    Energy Technology Data Exchange (ETDEWEB)

    Kushnir, E; Tietz, A; Galun, M

    1978-01-01

    The structure of medullary oil hyphae of twelve endolithic lichen species, belonging to different taxa and colonizing different habitats, was examined by light and electron microscopy. The chemical composition of lipids isolated from the oil hyphae and from two corresponding mycobionts grown in culture was determined. The oil hyphae of the various species appeared in different forms and contained large amounts of lipid in the form of oil globules. The hyphae of mycobionts isolated from two of the endoliths and grown in culture also contained large amounts of lipids. Triacylglycerol was the predominant lipid component in all the organisms examined. Hexadecanoic acid was the main saturated fatty acid; octadecenoic acid and octadecdienoic acid the predominant unsaturated fatty acids. Tetradecanoic, hexadecenoic, octadecanoic and octadectrienoic acids were also detected. The fatty acid distribution pattern appeared unaffected by the nature of substrate and climatic conditions. There is a certain similarity in the fatty acid composition in related species. 9 figures, 2 tables.

  10. Mountains

    Science.gov (United States)

    Regina M. Rochefort; Laurie L. Kurth; Tara W. Carolin; Robert R. Mierendorf; Kimberly Frappier; David L. Steenson

    2006-01-01

    This chapter concentrates on subalpine parklands and alpine meadows of southern British Columbia, Washington, Oregon, and western Montana. These areas lie on the flanks of several mountain ranges including the Olympics, the Cascades of Oregon and Washington, and the Coast Mountains in British Columbia.

  11. Factors limiting microbial growth and activity at a proposed high-level nuclear repository, Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Kieft, T.L.; Kovacik, W.P. Jr.; Ringelberg, D.B.; White, D.C.; Haldeman, D.L.; Amy, P.S.; Hersman, L.E.

    1997-01-01

    As part of the characterization of Yucca Mountain, Nev., as a potential repository for high-level nuclear waste, volcanic tuff was analyzed for microbial abundance and activity. Tuff was collected aseptically from nine sites along a tunnel in Yucca Mountain. Microbial abundance was generally low: direct microscopic cell counts were near detection limits at all sites (3.2 X 10(1) to 2.0 X 10(5) cells g-1 [dry weight]); plate counts of aerobic heterotrophs ranged from 1.0 X 10(1) to 3.2 X 10(3) CFU g-1 (dry weight). Phospholipid fatty acid concentrations (0.1 to 3.7 pmol g-1) also indicated low microbial biomasses: diglyceride fatty acid concentrations, indicative of dead cells, were in a similar range (0.2 to 2.3 pmol g-1). Potential microbial activity was quantified as 14CO2 production in microcosms containing radiolabeled substrates (glucose, acetate, and glutamic acid); amendments with water and nutrient solutions (N and P) were used to test factors potentially limiting this activity. Similarly, the potential for microbial growth and the factors limiting growth were determined by performing plate counts before and after incubating volcanic tuff samples for 24 h under various conditions: ambient moisture, water-amended, and amended with various nutrient solutions (N, P, and organic C). A high potential for microbial activity was demonstrated by high rates of substrate mineralization (as much as 70% of added organic C in 3 weeks). Water was the major limiting factor to growth and microbial activity, while amendments with N and P resulted in little further stimulation. Organic C amendments stimulated growth more than water alone

  12. Microbial and Functional Diversity within the Phyllosphere of Espeletia Species in an Andean High-Mountain Ecosystem.

    Science.gov (United States)

    Ruiz-Pérez, Carlos A; Restrepo, Silvia; Zambrano, María Mercedes

    2016-01-08

    Microbial populations residing in close contact with plants can be found in the rhizosphere, in the phyllosphere as epiphytes on the surface, or inside plants as endophytes. Here, we analyzed the microbiota associated with Espeletia plants, endemic to the Páramo environment of the Andes Mountains and a unique model for studying microbial populations and their adaptations to the adverse conditions of high-mountain neotropical ecosystems. Communities were analyzed using samples from the rhizosphere, necromass, and young and mature leaves, the last two analyzed separately as endophytes and epiphytes. The taxonomic composition determined by performing sequencing of the V5-V6 region of the 16S rRNA gene indicated differences among populations of the leaf phyllosphere, the necromass, and the rhizosphere, with predominance of some phyla but only few shared operational taxonomic units (OTUs). Functional profiles predicted on the basis of taxonomic affiliations differed from those obtained by GeoChip microarray analysis, which separated community functional capacities based on plant microenvironment. The identified metabolic pathways provided insight regarding microbial strategies for colonization and survival in these ecosystems. This study of novel plant phyllosphere microbiomes and their putative functional ecology is also the first step for future bioprospecting studies in search of enzymes, compounds, or microorganisms relevant to industry or for remediation efforts. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

  13. Experimental strain analysis of Clarens Sandstone colonised by endolithic lichens

    Directory of Open Access Journals (Sweden)

    D. Wessels

    1995-08-01

    Full Text Available Endolithic lichens occur commonly on Clarens Sandstone in South Africa, where they significantly contribute to the weathering of sandstone by means of mechanical and chemical weathering processes. This preliminary investigation reports on the success- ful use of strain gauges in detecting strain differences between sandstone without epilithic lichens and sandstone colonised by the euendolithic lichen Lecidea aff. sarcogynoides Korb. Mechanical weathering, expressed as strain changes, in Clarens Sandstone was studied during the transition from relatively dry winter to wet summer conditions. Daily weathering of sandstone due to thermal expansion and contraction of colonised and uncolonised sandstone could be shown. Our results show that liquid water in sandstone enhances the mechanical weathering of uncolonised Clarens Sandstone while water in the gaseous phase enhances mechanical weathering of sandstone by euendolithic lichens.

  14. Nutrient limitation and microbially mediated chemistry: studies using tuff inoculum obtained from the Exploratory Studies Facility, Yucca Mountain

    International Nuclear Information System (INIS)

    Chen, C. I.; Chuu, Y. J.; Meike, A.; Ringelberg, D.; Sawvel, A.

    1998-01-01

    Flow-through bioreactors are used to investigate the relationship between the supply (and limitation) of major nutrients required by microorganisms (C, N, P, S) and effluent chemistry to obtain data that can be useful to develop models of microbially mediated aqueous chemistry. The bioreactors were inoculated with crushed tuff from Yucca Mountain. Six of the 14 bioreactor experiments currently in operation have shown growth, which occurred in as few as 5 days and as much as a few months after initiation of the experiment. All of the bioreactors exhibiting growth contained glucose as a carbon source, but other nutritional components varied. Chemical signatures of each bioreactor were compared to each other and selected results were compared to computer simulations of the equivalent abiotic chemical reactions. At 21 C, the richest medium formulation produced a microbial community that lowered the effluent pH from 6.4 to as low as 3.9. The same medium formulation at 50 C produced no significant change in pH but caused a significant increase in Cl after a period of 200 days. Variations in concentrations of other elements, some of which appear to be periodic (Ca, Mg, etc.) also occur. Bioreactors fed with low C, N, P, S media showed growth, but had stabilized at lower cell densities. The room temperature bioreactor in this group exhibited a phospholipid fatty acid (PLFA) signature of sulfur- or iron-reducing bacteria, which produced a significant chemical signature in the effluent from that bioreactor. Growth had not been observed yet in the alkaline bioreactors, even in those containing glucose. The value of combining detailed chemical and community (e.g., ester-linked PLFA) analyses, long-duration experiments, and abiotic chemical models to distinguish chemical patterns is evident. Although all of the bioreactors contain the same initial microorganisms and mineral constituents, PLFA analysis demonstrates that both input chemistry and temperature determine the

  15. Microbial Impacts to the Near-Field Environment Geochemistry (MING): A Model for Estimating Microbial Communities in Repository Drifts at Yucca Mountain

    Energy Technology Data Exchange (ETDEWEB)

    D.M. Jolley; T.F. Ehrhorn; J. Horn

    2002-03-19

    Geochemical and microbiological modeling was performed to evaluate the potential quantities and impact of microorganisms on the geochemistry of the area adjacent to and within nuclear waste packages in the proposed repository drifts at Yucca Mountain, Nevada. The microbial growth results from the introduction of water, ground support, and waste package materials into the deep unsaturated rock. The simulations, which spanned one million years, were accomplished using a newly developed computer code, Microbial Impacts to the Near-Field Environment Geochemistry (MING). MING uses environmental thresholds for limiting microbial growth to temperatures below 120 C and above relative humidities of 90 percent in repository drifts. Once these thresholds are met, MING expands upon a mass balance and thermodynamic approach proposed by McKinley and others (1997), by using kinetic rates to supply constituents from design materials and constituent fluxes including solubilized rock components into the drift, to perform two separate mass-balance calculations as a function of time. The first (nutrient limit) assesses the available nutrients (C, N, P and S) and calculates how many microorganisms can be produced based on a microorganism stoichiometry of C{sub 160}(H{sub 280}O{sub 80})N{sub 30}P{sub 2}S. The second (energy limit) calculates the energy available from optimally combined redox couples for the temperature, and pH at that time. This optimization maximizes those reactions that produce > 15kJ/mol (limit on useable energy) using an iterative linear optimization technique. The final available energy value is converted to microbial mass at a rate of 1 kg of biomass (dry weight) for every 64 MJ of energy. These two values (nutrient limit and energy limit) are then compared and the smaller value represents the number of microorganisms that can be produced over a specified time. MING can also be adapted to investigate other problems of interest as the model can be used in saturated

  16. Microbial Impacts to the Near-Field Environment Geochemistry (MING): A Model for Estimating Microbial Communities in Repository Drifts at Yucca Mountain

    International Nuclear Information System (INIS)

    Jolley, D.M.; Ehrhorn, T.F.; Horn, J.

    2002-01-01

    Geochemical and microbiological modeling was performed to evaluate the potential quantities and impact of microorganisms on the geochemistry of the area adjacent to and within nuclear waste packages in the proposed repository drifts at Yucca Mountain, Nevada. The microbial growth results from the introduction of water, ground support, and waste package materials into the deep unsaturated rock. The simulations, which spanned one million years, were accomplished using a newly developed computer code, Microbial Impacts to the Near-Field Environment Geochemistry (MING). MING uses environmental thresholds for limiting microbial growth to temperatures below 120 C and above relative humidities of 90 percent in repository drifts. Once these thresholds are met, MING expands upon a mass balance and thermodynamic approach proposed by McKinley and others (1997), by using kinetic rates to supply constituents from design materials and constituent fluxes including solubilized rock components into the drift, to perform two separate mass-balance calculations as a function of time. The first (nutrient limit) assesses the available nutrients (C, N, P and S) and calculates how many microorganisms can be produced based on a microorganism stoichiometry of C 160 (H 280 O 80 )N 30 P 2 S. The second (energy limit) calculates the energy available from optimally combined redox couples for the temperature, and pH at that time. This optimization maximizes those reactions that produce > 15kJ/mol (limit on useable energy) using an iterative linear optimization technique. The final available energy value is converted to microbial mass at a rate of 1 kg of biomass (dry weight) for every 64 MJ of energy. These two values (nutrient limit and energy limit) are then compared and the smaller value represents the number of microorganisms that can be produced over a specified time. MING can also be adapted to investigate other problems of interest as the model can be used in saturated and unsaturated

  17. Soil Microbial Biomass, Basal Respiration and Enzyme Activity of Main Forest Types in the Qinling Mountains

    Science.gov (United States)

    Cheng, Fei; Peng, Xiaobang; Zhao, Peng; Yuan, Jie; Zhong, Chonggao; Cheng, Yalong; Cui, Cui; Zhang, Shuoxin

    2013-01-01

    Different forest types exert essential impacts on soil physical-chemical characteristics by dominant tree species producing diverse litters and root exudates, thereby further regulating size and activity of soil microbial communities. However, the study accuracy is usually restricted by differences in climate, soil type and forest age. Our objective is to precisely quantify soil microbial biomass, basal respiration and enzyme activity of five natural secondary forest (NSF) types with the same stand age and soil type in a small climate region and to evaluate relationship between soil microbial and physical-chemical characters. We determined soil physical-chemical indices and used the chloroform fumigation-extraction method, alkali absorption method and titration or colorimetry to obtain the microbial data. Our results showed that soil physical-chemical characters remarkably differed among the NSFs. Microbial biomass carbon (Cmic) was the highest in wilson spruce soils, while microbial biomass nitrogen (Nmic) was the highest in sharptooth oak soils. Moreover, the highest basal respiration was found in the spruce soils, but mixed, Chinese pine and spruce stands exhibited a higher soil qCO2. The spruce soils had the highest Cmic/Nmic ratio, the greatest Nmic/TN and Cmic/Corg ratios were found in the oak soils. Additionally, the spruce soils had the maximum invertase activity and the minimum urease and catalase activities, but the maximum urease and catalase activities were found in the mixed stand. The Pearson correlation and principle component analyses revealed that the soils of spruce and oak stands obviously discriminated from other NSFs, whereas the others were similar. This suggested that the forest types affected soil microbial properties significantly due to differences in soil physical-chemical features. PMID:23840671

  18. Soil Microbial Community Changes in Wooded Mountain Pastures due to Simulated Effects of Cattle Grazing

    NARCIS (Netherlands)

    Kohler, F.; Hamelin, J.; Gillet, F.; Gobat, J.M.; Buttler, A.

    2005-01-01

    The effect of cattle activity on pastures can be subdivided into three categories of disturbances: herbage removal, dunging and trampling. The objective of this study was to assess separately or in combination the effect of these factors on the potential activities of soil microbial communities and

  19. Microbial N immobilization is of great importance in acidified mountain spruce forest soils

    Czech Academy of Sciences Publication Activity Database

    Tahovská, K.; Kaňa, Jiří; Bárta, J.; Oulehle, F.; Richter, A.; Šantrůčková, H.

    2013-01-01

    Roč. 59, April (2013), s. 58-71 ISSN 0038-0717 R&D Projects: GA AV ČR(CZ) KJB600960907; GA ČR(CZ) GAP504/12/1218 Institutional support: RVO:60077344 Keywords : N immobilization * microbial biomass * 15 N * N saturation * DOC * nitrate leaching * nitrification * C limitation * fungi/bacteria ratio * forest floor Subject RIV: CE - Biochemistry Impact factor: 4.410, year: 2013

  20. Belowground Carbon Allocation and Plant-Microbial Interactions Drive Resistance and Resilience of Mountain Grassland Communities to Drought

    Science.gov (United States)

    Karlowsky, S.; Augusti, A.; Ingrisch, J.; Hasibeder, R.; Lavorel, S.; Bahn, M.; Gleixner, G.

    2016-12-01

    Belowground carbon allocation (BCA) and plant-microbial interactions are crucial for the functioning of terrestrial ecosystems. Recent research suggests that extreme events can have severe effects on these processes but it is unknown how land use intensity potentially modifies their responses. We studied the resistance and resilience of mountain grassland communities to prolonged drought and investigated the role of plant C allocation and soil microbial communities in mediating drought resistance and immediate recovery. In a common garden experiment we exposed monoliths from an abandoned grassland and a hay meadow to an early summer drought. Two independent 13C pulse labeling experiments were conducted, the first during peak drought and the second during the recovery phase. The 13C incorporation was analyzed in above- and belowground plant parts and in phospho- and neutral lipid fatty acids of soil microorganisms. In addition, a 15N label was added at the rewetting to determine plant N uptake. We found that C uptake, BCA and C transfer to soil microorganisms were less strongly reduced by drought in the abandoned grassland than in the meadow. Moreover, drought induced an increase of arbuscular mycorrhiza fungi (AMF) marker in the abandoned grassland. Nevertheless, C uptake and related parameters were quickly recovered and N uptake increased in the meadow during recovery. Unexpectedly, AMF and their C uptake were generally reduced during recovery, while bacteria increased and quickly recovered C uptake, particularly in the meadow. Our results showed a negative relation between high resistance and fast recovery. The more resistant abandoned grassland plant communities seemed to invest more C below ground and into interactions with AMF during drought, likely to access water through their hyphal network. Conversely, meadow communities invested more C from recent photosynthesis into bacterial communities during recovery, obviously to gain more nutrients for regrowth

  1. Endolithic algae of semi-desert sandstones: systematic, biogeographic and ecophysiologic investigations

    International Nuclear Information System (INIS)

    Bell, R.A.

    1986-01-01

    Investigations were conducted into the ecology of an unusual algal community in northern Arizona. These microorganisms are called endolithic algae because they occur beneath the surface of rocks. Eighteen taxa, including representatives of both eukaryotic and prokaryotic genera, were isolated from below the surface of eight sandstones in four semi-desert and cold temperate biomes of the Colorado Plateau. As the macroclimate of the area changes from cold temperature desert scrub to cold temperate forest the taxonomic composition of the endolithic algal communities shifts from domination by coccoid blue-green algae to domination by coccoid and sarcinoid green algae. The algal communities varied in generic composition, chlorophyll a content, and in their location within the different sandstones. Investigations into the microclimate of the endolithic algal zone in two adjacent but differently-colored sections (white and brown) of Coconino sandstone have demonstrated differences between the environment above the rock surface and that just beneath the surface. In seasonal samples of the Coconino sandstone, chlorophyll a content ranged from 50 to 100 mg x m -2 in the white rock and 8 to 45 mg x m -2 in the brown rock. Primary production (as measured by 14 CO 2 incorporation) displayed marked seasonal patterns that appear to be correlated to the environmental conditions within the rocks as opposed to those outside the rocks. The widespread distribution of certain algae in the endolithic habitats of the Colorado Plateau and their presence in rocks at quite distant locations suggests that the endolithic habitat may be utilized by algae whenever it provides more favorable conditions than the surrounding surfaces

  2. Adaptation strategies of endolithic chlorophototrophs to survive the hyperarid and extreme solar radiation environment of the Atacama Desert

    Directory of Open Access Journals (Sweden)

    Jacek eWierzchos

    2015-09-01

    Full Text Available The Atacama Desert, northern Chile, is one of the driest deserts on Earth and, as such, a natural laboratory to explore the limits of life and the strategies evolved by microorganisms to adapt to extreme environments. Here we report the exceptional adaptation strategies of chlorophototrophic and eukaryotic algae, and chlorophototrophic and prokaryotic cyanobacteria to the hyperarid and extremely high solar radiation conditions occurring in this desert. Our approach combined several microscopy techniques, spectroscopic analytical methods, and molecular analyses. We found that the major adaptation strategy was to avoid the extreme environmental conditions by colonizing cryptoendolithic, as well as, hypoendolithic habitats within gypsum deposits. The cryptoendolithic colonization occurred a few millimeters beneath the gypsum surface and showed a succession of organized horizons of algae and cyanobacteria, which has never been reported for endolithic microbial communities. The presence of cyanobacteria beneath the algal layer, in close contact with sepiolite inclusions, and their hypoendolithic colonization suggest that occasional liquid water might persist within these sub-microhabitats. We also identified the presence of abundant carotenoids in the upper cryptoendolithic algal habitat and scytonemin in the cyanobacteria hypoendolithic habitat. This study illustrates that successful lithobiontic microbial colonization at the limit for microbial life is the result of a combination of adaptive strategies to avoid excess solar irradiance and extreme evapotranspiration rates, taking advantage of the complex structural and mineralogical characteristics of gypsum deposits – conceptually called rock’s habitable architecture. Additionally self-protection by synthesis and accumulation of secondary metabolites likely produces a shielding effect that prevents photoinhibition and lethal photooxidative damage to the chlorophototrophs, representing another

  3. Adaptation strategies of endolithic chlorophototrophs to survive the hyperarid and extreme solar radiation environment of the Atacama Desert.

    Science.gov (United States)

    Wierzchos, Jacek; DiRuggiero, Jocelyne; Vítek, Petr; Artieda, Octavio; Souza-Egipsy, Virginia; Škaloud, Pavel; Tisza, Michel; Davila, Alfonso F; Vílchez, Carlos; Garbayo, Inés; Ascaso, Carmen

    2015-01-01

    The Atacama Desert, northern Chile, is one of the driest deserts on Earth and, as such, a natural laboratory to explore the limits of life and the strategies evolved by microorganisms to adapt to extreme environments. Here we report the exceptional adaptation strategies of chlorophototrophic and eukaryotic algae, and chlorophototrophic and prokaryotic cyanobacteria to the hyperarid and extremely high solar radiation conditions occurring in this desert. Our approach combined several microscopy techniques, spectroscopic analytical methods, and molecular analyses. We found that the major adaptation strategy was to avoid the extreme environmental conditions by colonizing cryptoendolithic, as well as, hypoendolithic habitats within gypsum deposits. The cryptoendolithic colonization occurred a few millimeters beneath the gypsum surface and showed a succession of organized horizons of algae and cyanobacteria, which has never been reported for endolithic microbial communities. The presence of cyanobacteria beneath the algal layer, in close contact with sepiolite inclusions, and their hypoendolithic colonization suggest that occasional liquid water might persist within these sub-microhabitats. We also identified the presence of abundant carotenoids in the upper cryptoendolithic algal habitat and scytonemin in the cyanobacteria hypoendolithic habitat. This study illustrates that successful lithobiontic microbial colonization at the limit for microbial life is the result of a combination of adaptive strategies to avoid excess solar irradiance and extreme evapotranspiration rates, taking advantage of the complex structural and mineralogical characteristics of gypsum deposits-conceptually called "rock's habitable architecture." Additionally, self-protection by synthesis and accumulation of secondary metabolites likely produces a shielding effect that prevents photoinhibition and lethal photooxidative damage to the chlorophototrophs, representing another level of adaptation.

  4. Rhododendron aureum Georgi formed a special soil microbial community and competed with above-ground plants on the tundra of the Changbai Mountain, China.

    Science.gov (United States)

    Wang, Xiaolong; Li, Lin; Zhao, Wei; Zhao, Jiaxin; Chen, Xia

    2017-09-01

    Rhododendron aureum Georgi is a perennial evergreen dwarf shrub that grows at all elevations within the alpine tundra of northern China. Previous research has investigated the plant communities of R. aureum ; however, little information is available regarding interspecific competition and underground soil microbial community composition. The objective of our study was to determine whether the presence of R. aureum creates a unique soil microbiome and to investigate the relationship between R. aureum and other plant species. Our study site ranged from 1,800 to 2,600 m above sea level on the northern slope of the Changbai Mountain. The results show that the soil from sites with an R. aureum community had a higher abundance of nitrogen-fixing bacteria and a higher resistance to pathogens than soils from sites without R. aureum . We emphasize that R. aureum promotes a unique soil microbial community structure that is distinct from those associated with other plants. Elevation and microbial biomass were the main influencing factors for plant community structure. Analysis of interspecific relationships reveals that R. aureum is negatively associated with most other dominant shrubs and herbs, suggesting interspecific competition. It is necessary to focus on other dominant species if protection and restoration of the R. aureum competition is to occur. In the future, more is needed to prove whether R. aureum decreases species diversity in the tundra ecosystems of Changbai Mountain.

  5. Effects of endolithic parasitism on invasive and indigenous mussels in a variable physical environment.

    Directory of Open Access Journals (Sweden)

    Gerardo Ivan Zardi

    Full Text Available Biotic stress may operate in concert with physical environmental conditions to limit or facilitate invasion processes while altering competitive interactions between invaders and native species. Here, we examine how endolithic parasitism of an invasive and an indigenous mussel species acts in synergy with abiotic conditions of the habitat. Our results show that the invasive Mytilus galloprovincialis is more infested than the native Perna perna and this difference is probably due to the greater thickness of the protective outer-layer of the shell of the indigenous species. Higher abrasion due to waves on the open coast could account for dissimilarities in degree of infestation between bays and the more wave-exposed open coast. Also micro-scale variations of light affected the level of endolithic parasitism, which was more intense at non-shaded sites. The higher levels of endolithic parasitism in Mytilus mirrored greater mortality rates attributed to parasitism in this species. Condition index, attachment strength and shell strength of both species were negatively affected by the parasites suggesting an energy trade-off between the need to repair the damaged shell and the other physiological parameters. We suggest that, because it has a lower attachment strength and a thinner shell, the invasiveness of M. galloprovincialis will be limited at sun and wave exposed locations where endolithic activity, shell scouring and risk of dislodgement are high. These results underline the crucial role of physical environment in regulating biotic stress, and how these physical-biological interactions may explain site-to-site variability of competitive balances between invasive and indigenous species.

  6. [Influence of different slope position and profile in Disporopsis pernyi forest land on soil microbial biomass and enzyme activity in southwest Karst mountain of China ].

    Science.gov (United States)

    Qin, Hua-Jun; He, Bing-Hui; Zhao, Xuan-chi; Li, Yuan; Mao, Wen-tao; Zeng, Qing-ping

    2014-09-01

    Soil microbial biomass and enzyme activity are important parameters to evaluate the quality of the soil environment. The goal of this study was to determine the influence of different slope position and section in Disporopsis pernyi forest land on the soil microbial biomass and enzyme activity in southwest Karst Mountain. In this study, we chose the Dip forest land at Yunfo village Chengdong town Liangping country Chongqing Province as the study object, to analyze the influence of three different slope positions [Up Slope(US), Middle Slope(MS), Below Slope(BS)] and two different sections-upper layer(0-15 cm) and bottom layer(15-30 cm) on the soil microbial biomass carbon (SMBC), soil microbial biomass nitrogen (SMBN), microbial carbon entropy (qMBC), microbial nitrogen entropy (qMBN) , catalase(CAT), alkaline phosphatase (ALK), urease(URE), and invertase(INV). The results showed that the same trend (BS > MS > US) was found for SMBC, SMBN, qMBC, qMBN, CAT and INV of upper soil layer, while a different trend (BS > US > MS) was observed for ALK. In addition, another trend (MS > US > BS) was observed for URE. The same trend (BS > MS >US) was observed for SMBN, qMBN, CAT, ALK, URE and INV in bottom layer, but a different trend (MS > BS > US) was observed for SMBC and qMBC. The SMBC, SMBN, CAT, ALK, URE and INV manifested as upper > bottom with reduction of the section, while qMBC and qMBN showed the opposite trend. Correlation analysis indicated that there were significant (P <0.05) or highly significant (P < 0.01) positive correlations among SMBC in different slope position and section, soil enzyme activity and moisture. According to the two equations of regression analysis, SMBC tended to increase with the increasing CAT and ALK, while decreased with the increasing pH. Then SMBN tended to increase with the increasing URE and INV.

  7. Excess of Organic Carbon in Mountain Spruce Forest Soils after Bark Beetle Outbreak Altered Microbial N Transformations and Mitigated N-Saturation.

    Directory of Open Access Journals (Sweden)

    Jiří Kaňa

    Full Text Available Mountain forests in National park Bohemian Forest (Czech Republic were affected by bark beetle attack and windthrows in 2004-2008, followed by an extensive tree dieback. We evaluated changes in the biochemistry of the uppermost soil horizons with the emphasis on carbon (C and nitrogen (N cycling in a near-natural spruce (Picea abies mountain forest after the forest dieback, and compared it with an undisturbed control plot of similar age, climate, elevation, deposition, N-saturation level, and land use history. We hypothesised that the high litter input after forest dieback at the disturbed plot and its consequent decomposition might influence the availability of C for microorganisms, and consequently, N transformations in the soil. The concentrations of dissolved organic C (DOC and N (DON in soil water extracts rapidly increased at the disturbed plot for 3 yeas and then continually decreased. Net ammonification exhibited a similar trend as DOC and DON, indicating elevated mineralization. Despite the high ammonium concentrations found after the forest dieback (an increase from 0.5 mmol kg-1 to 2-3 mmol kg-1, net nitrification was stable and low during these 3 years. After the DOC depletion and decrease in microbial biomass 5 years after the forest dieback, net nitrification started to rise, and nitrate concentrations increased from 0.2-1 mmol kg-1 to 2-3 mmol kg-1. Our results emphasize the key role of the availability of organic C in microbial N transformations, which probably promoted microbial heterotrophic activity at the expense of slow-growing nitrifiers.

  8. Adaptation strategies of endolithic chlorophototrophs to survive the hyperarid and extreme solar radiation environment of the Atacama Desert

    Czech Academy of Sciences Publication Activity Database

    Wierzchos, J.; DiRuggiero, J.; Vítek, Petr; Artieda, O.; Souza-Egipsy, V.; Škaloud, P.; Tisza, M.; Davilla, A. F.; Vilchez, C.; Garbayo, I.; Ascaso, C.

    2015-01-01

    Roč. 6, č. 934 (2015), s. 1-17 ISSN 1664-302X R&D Projects: GA MŠk EE2.3.20.0246 Institutional support: RVO:67179843 Keywords : Atacama Desert * carotenoids * endolithic chlorophototrophs * extreme environment * gypsum * scytonemin Subject RIV: EF - Botanics Impact factor: 4.165, year: 2015

  9. Microbial community structure and activity in a Colorado Rocky Mountain forest soil scarred by slash pile burning

    Science.gov (United States)

    Aida E. Jimenez Esquilin; Mary E. Stromberger; William J. Massman; John M. Frank; Wayne D. Shepperd

    2007-01-01

    Tree thinning and harvesting produces large amounts of slash material which are typically disposed of by burning, often resulting in severe soil heating. We measured soil chemical properties and microbial community structure and function over time to determine effects of slash pile burning in a ponderosa pine forest soil. Real time data were collected for soil...

  10. Microbial and geochemical assessment of bauxitic un-mined and post-mined chronosequence soils from Mocho Mountains, Jamaica.

    Science.gov (United States)

    Lewis, Dawn E; Chauhan, Ashvini; White, John R; Overholt, Will; Green, Stefan J; Jasrotia, Puja; Wafula, Denis; Jagoe, Charles

    2012-10-01

    Microorganisms are very sensitive to environmental change and can be used to gauge anthropogenic impacts and even predict restoration success of degraded environments. Here, we report assessment of bauxite mining activities on soil biogeochemistry and microbial community structure using un-mined and three post-mined sites in Jamaica. The post-mined soils represent a chronosequence, undergoing restoration since 1987, 1997, and 2007. Soils were collected during dry and wet seasons and analyzed for pH, organic matter (OM), total carbon (TC), nitrogen (TN), and phosphorus. The microbial community structure was assessed through quantitative PCR and massively parallel bacterial ribosomal RNA (rRNA) gene sequencing. Edaphic factors and microbial community composition were analyzed using multivariate statistical approaches and revealed a significant, negative impact of mining on soil that persisted even after greater than 20 years of restoration. Seasonal fluctuations contributed to variation in measured soil properties and community composition, but they were minor in comparison to long-term effects of mining. In both seasons, post-mined soils were higher in pH but OM, TC, and TN decreased. Bacterial rRNA gene analyses demonstrated a general decrease in diversity in post-mined soils and up to a 3-log decrease in rRNA gene abundance. Community composition analyses demonstrated that bacteria from the Proteobacteria (α, β, γ, δ), Acidobacteria, and Firmicutes were abundant in all soils. The abundance of Firmicutes was elevated in newer post-mined soils relative to the un-mined soil, and this contrasted a decrease, relative to un-mined soils, in proteobacterial and acidobacterial rRNA gene abundances. Our study indicates long-lasting impacts of mining activities to soil biogeochemical and microbial properties with impending loss in soil productivity.

  11. In vitro receptivity of carbonate rocks to endolithic lichen-forming aposymbionts.

    Science.gov (United States)

    Favero-Longo, Sergio E; Borghi, Alessandro; Tretiach, Mauro; Piervittori, Rosanna

    2009-10-01

    Sterile cultured isolates of lichen-forming aposymbionts have not yet been used to investigate lichen-rock interactions under controlled conditions. In this study mycobionts and photobiont of the endolithic lichens Bagliettoa baldensis and Bagliettoa marmorea were isolated and inoculated with coupons of one limestone and four marbles commonly employed in the Cultural Heritage framework. After one year of incubation, microscopic observations of polished cross-sections were performed to verify if the typical colonization patterns observed in the field may be reproduced in vitro and to evaluate the receptivity of the five lithotypes to endolithic lichens. The mycobionts of the two species developed both on the surface of and within all the lithotypes, showing different penetration pathways which depend on mineralogical and structural features and highlight different receptivity. By contrast, algae inoculated with the coupons did not penetrate them. Observations suggest that the hyphal penetration along intrinsic discontinuities of rocks is a relatively fast phenomenon when these organisms are generally considered as slow-growing. Samples from limestone outcrops and abandoned marble quarries, colonized by the same species or other representatives of Verrucariaceae, showed penetration pathways intriguingly similar to those reproduced in vitro and highlighted that lichen-driven erosion processes only increase the availability of hyphal passageways after a long-term colonization. These results show that in vitro incubation of sterile cultured lichen-forming ascomycetes with rock coupons is a practicable experimental system to investigate the lichen-rock interactions under controlled conditions and, together with analysis in situ, may support decisions on conservative treatments of historical and cultural significant stone substrata.

  12. Does iron inhibit cryptoendolithic microbial communities?

    Science.gov (United States)

    Johnston, C. G.; Vestal, J. R.; Friedmann, E. I. (Principal Investigator)

    1988-01-01

    Photosynthetic activity of three cryptoendolithic microbial communities was studied under controlled conditions in the laboratory. In two of these communities, the dominant organisms were lichens, collected from Linnaeus Terrace and from Battleship Promontory. The third community, dominated by cyanobacteria, was collected from Battleship Promontory. Both sites are in the ice-free valleys of southern Victoria Land. Previous efforts have shown how physical conditions can influence metabolic activity in endolithic communities (Kappen and Friedmann 1983; Kappen, Friedmann, and Garty 1981; Vestal, Federle, and Friedmann 1984). Biological activity can also be strongly influenced by the chemical environment. Inorganic nutrients such as nitrate, ammonia, and phosphate are often limiting factors, so their effects on photosynthetic carbon-14 bicarbonate incorporation were investigated. Iron and manganese are two metals present in Linnaeus Terrace and Battleship Promontory sandstones, and their effects on photosynthesis were also studied. The results may add to our understanding of biogeochemical interactions within this unique microbial community.

  13. Endolithic algae in living stony corals: algal concentrations under influence of depth-dependent light conditions and coral tissue fluorescence in Agaricia agaricites (L.) and Meandrina meandrites (L.) (Scleractinia, Anthozoa)

    NARCIS (Netherlands)

    Delvoye, Laurent

    1992-01-01

    DELVOYE, L., 1992. Endolithic algae in living stony corals: Algal concentrations under influence of depth-dependent light conditions and coral tissue fluorescence in Agaricia agaricites (L) and Meandrina meandrites (L.) (Sclereactinia, Anthozoa). Studies Nat. Hist. Caribbean Region 71, Amsterdam

  14. Complex and interactive effects of ocean acidification and temperature on epilithic and endolithic coral-reef turf algal assemblages

    Science.gov (United States)

    Johnson, Maggie D.; Comeau, Steeve; Lantz, Coulson A.; Smith, Jennifer E.

    2017-12-01

    Turf algal assemblages are ubiquitous primary producers on coral reefs, but little is known about the response of this diverse group to ocean acidification (OA) across different temperatures. We tested the hypothesis that CO2 influences the functional response of epilithic and endolithic turf assemblages to increasing temperature. Replicate carbonate plugs covered by turf were collected from the reef and exposed to ambient and high pCO2 (1000 µatm) conditions for 3 weeks. Each pCO2 treatment was replicated across six temperatures (24.0-31.5 °C) that spanned the full seasonal temperature range on a fringing reef in Moorea, French Polynesia, and included one warming treatment (3 °C above daily average temperatures). Temperature and CO2 enrichment had complex, and sometimes interactive, effects on turf metabolism and growth. Photosynthetic and respiration rates were enhanced by increasing temperature, with an interactive effect of CO2 enrichment. Photosynthetic rates were amplified by high CO2 in the warmest temperatures, while the increase in respiration rates with temperature were enhanced under ambient CO2. Epilithic turf growth rates were not affected by temperature, but increased in response to CO2 enrichment. We found that CO2 and temperature interactively affected the endolithic assemblage, with the highest growth rates under CO2 enrichment, but only at the warmest temperatures. These results demonstrate how OA may influence algal physiology and growth across a range of ecologically relevant temperatures, and indicate that the effects of CO2 enrichment on coral-reef turf assemblages can be temperature dependent. The complex effects of CO2 enrichment and temperature across a suite of algal responses illustrates the importance of incorporating multiple stressors into global change experiments.

  15. Excess of organic carbon in mountain spruce forest soils after bark beetle outbreak altered microbial N transformations and mitigated N-saturation

    Czech Academy of Sciences Publication Activity Database

    Kaňa, Jiří; Tahovská, K.; Kopáček, Jiří; Šantrůčková, H.

    2015-01-01

    Roč. 10, č. 7 (2015), e0134165 E-ISSN 1932-6203 R&D Projects: GA ČR(CZ) GAP504/12/1218 Institutional support: RVO:60077344 Keywords : N-saturation * bark beetle outbreak * soil microbial biomass * nitrification * ammonification * DOC * nitrate Subject RIV: EH - Ecology, Behaviour Impact factor: 3.057, year: 2015

  16. Effect of 40 and 80 Years of Conifer Regrowth on Soil Microbial Activities and Community Structure in Subtropical Low Mountain Forests

    Directory of Open Access Journals (Sweden)

    Ed-Haun Chang

    2016-10-01

    Full Text Available The effects of long-term reforestation on soil microbial communities and biomass are poorly understood. This study was conducted on two coniferous plantations: Cunninghamia konishii Hayata, planted 40 years ago (CONIF-40, and Calocedrus formosana (Florin Florin, planted 80 years ago (CONIF-80. An adjacent natural broadleaf forest (BROAD-Nat was used as a control. We determined microbial biomass C and N contents, enzyme activities, and community composition (via phospholipid fatty acid [PLFA] assessment. Both microbial biomass and PLFA content were higher in the summer than in the winter and differed among the forests in summer only. Total PLFA, total bacterial, gram-positive bacterial, gram-negative bacterial, and vesicular arbuscular mycorrhizal fungal contents followed the same pattern. Total fungal content and the ratios of fungi to bacteria and of gram-positive to gram-negative bacteria were highest in CONIF-40, with no difference between the other forests. Principal component analysis of PLFA contents revealed that CONIF-40 communities were distinct from those of CONIF-80 and BROAD-Nat. Our results suggest that vegetation replacement during reforestation exerts a prolonged impact on the soil microbial community. The understory broadleaf shrubs and trees established after coniferous plantation reforestation may balance out the effects of coniferous litter, contributing to bacterial recovery.

  17. Overgrowth of fungi (endolithic hypermycosis) associated with multifocal to diffuse distinct amorphous dark discoloration of corals in the Indo-Pacific

    Science.gov (United States)

    Work, Thierry M.; Aeby, G.S.; Stanton, F.G.; Fenner, D.

    2008-01-01

    Coral disease surveys in American Samoa and Hawai‘i revealed colonies with a distinct dark discoloration affecting 20–60% of the colony surface (Fig. 1a). In some cases, tissue loss with algal infiltration was present within discolored areas. On microscopy, these lesions had marked overgrowth of the coral skeleton and tissues with septate branching structures that stained positive with Grocott’s Methenamine Silver (fungal hyphae) accompanied by necrosis and fragmentation of coral tissues (Fig. 1b). We have observed this condition grossly and microscopically in Pavona varians, Psammocora nierstraszi, and Montipora sp. in American Samoa and in Pavona maldivensis and P. varians in Hawai‘i. This condition resembles Dark Spots Disease from the Caribbean (Solano et al. 1993) that also shows endolithic hypermycosis (Galloway et al. 2007), suggesting that the association between dark discoloration of corals and overgrowth of endolithic fungi may be common (Western Atlantic, Indo-Pacific). Based on gross and microscopic morphology, tissue atrophy may precede overgrowth of endolithic fungi, but this awaits confirmation through systematic studies that monitor the development of lesions over time (pathogenesis). Using standardized terminology (Work and Aeby 2006) to describe lesions facilitates regional comparisons of coral disease.

  18. A morphogenetic survey on ciliate plankton from a mountain lake pinpoints the necessity of lineage-specific barcode markers in microbial ecology.

    Science.gov (United States)

    Stoeck, Thorsten; Breiner, Hans-Werner; Filker, Sabine; Ostermaier, Veronika; Kammerlander, Barbara; Sonntag, Bettina

    2014-02-01

    Analyses of high-throughput environmental sequencing data have become the 'gold-standard' to address fundamental questions of microbial diversity, ecology and biogeography. Findings that emerged from sequencing are, e.g. the discovery of the extensive 'rare microbial biosphere' and its potential function as a seed-bank. Even though applied since several years, results from high-throughput environmental sequencing have hardly been validated. We assessed how well pyrosequenced amplicons [the hypervariable eukaryotic V4 region of the small subunit ribosomal RNA (SSU rRNA) gene] reflected morphotype ciliate plankton. Moreover, we assessed if amplicon sequencing had the potential to detect the annual ciliate plankton stock. In both cases, we identified significant quantitative and qualitative differences. Our study makes evident that taxon abundance distributions inferred from amplicon data are highly biased and do not mirror actual morphotype abundances at all. Potential reasons included cell losses after fixation, cryptic morphotypes, resting stages, insufficient sequence data availability of morphologically described species and the unsatisfying resolution of the V4 SSU rRNA fragment for accurate taxonomic assignments. The latter two underline the necessity of barcoding initiatives for eukaryotic microbes to better and fully exploit environmental amplicon data sets, which then will also allow studying the potential of seed-bank taxa as a buffer for environmental changes. © 2013 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

  19. Mountaineering Tourism

    Directory of Open Access Journals (Sweden)

    Patrick Maher

    2016-08-01

    Full Text Available Reviewed: Mountaineering Tourism Edited by Ghazali Musa, James Higham, and Anna Thompson-Carr. Abingdon, United Kingdom: Routledge, 2015. xxvi + 358 pp. Hardcover. US$ 145.00. ISBN 978-1-138-78237-2.

  20. Microbial ecology and biogeochemistry of continental Antarctic soils

    Directory of Open Access Journals (Sweden)

    Don A Cowan

    2014-04-01

    Full Text Available The Antarctica Dry Valleys are regarded as the coldest hyperarid desert system on Earth. While a wide variety of environmental stressors including very low minimum temperatures, frequent freeze-thaw cycles and low water availability impose severe limitations to life, suitable niches for abundant microbial colonization exist. Antarctic desert soils contain much higher levels of microbial diversity than previously thought. Edaphic niches, including cryptic and refuge habitats, microbial mats and permafrost soils all harbour microbial communities which drive key biogeochemical cycling processes. For example, lithobionts (hypoliths and endoliths possess a genetic capacity for nitrogen and carbon cycling, polymer degradation and other system processes. Nitrogen fixation rates of hypoliths, as assessed through acetylene reduction assays, suggest that these communities are a significant input source for nitrogen into these oligotrophic soils. Here we review aspects of microbial diversity in Antarctic soils with an emphasis on functionality and capacity. We assess current knowledge regarding adaptations to Antarctic soil environments and highlight the current threats to Antarctic desert soil communities.

  1. Microbial ecology and biogeochemistry of continental Antarctic soils.

    Science.gov (United States)

    Cowan, Don A; Makhalanyane, Thulani P; Dennis, Paul G; Hopkins, David W

    2014-01-01

    The Antarctica Dry Valleys are regarded as the coldest hyperarid desert system on Earth. While a wide variety of environmental stressors including very low minimum temperatures, frequent freeze-thaw cycles and low water availability impose severe limitations to life, suitable niches for abundant microbial colonization exist. Antarctic desert soils contain much higher levels of microbial diversity than previously thought. Edaphic niches, including cryptic and refuge habitats, microbial mats and permafrost soils all harbor microbial communities which drive key biogeochemical cycling processes. For example, lithobionts (hypoliths and endoliths) possess a genetic capacity for nitrogen and carbon cycling, polymer degradation, and other system processes. Nitrogen fixation rates of hypoliths, as assessed through acetylene reduction assays, suggest that these communities are a significant input source for nitrogen into these oligotrophic soils. Here we review aspects of microbial diversity in Antarctic soils with an emphasis on functionality and capacity. We assess current knowledge regarding adaptations to Antarctic soil environments and highlight the current threats to Antarctic desert soil communities.

  2. CURRENT MICROBIOLOGICAL ASPECTS IN HIGH MOUNTAIN

    OpenAIRE

    KURT HANSELMANN; MUNTI YUHANA

    2006-01-01

    Remote and normally unpolluted high mountain lakes provide habitats with no or very limited anthropogenic influences and, therefore, their hydrodynamics are mostly regulated by the natural c onditions. Researches in high mountain lakes deal with measuring and modeling the response of the habitats to environmental changes especially correlated to acid deposition, pollutants influx and climatic variability. The microbial world has also become a focus in many studies of these extreme ecosystem...

  3. Microbial ecology of artisanal italian cheese: Molecular microbial characterization by culture-independent method

    International Nuclear Information System (INIS)

    Colombo, E.; Scarpellini, M.; Franzatti, L.; Dioguardi, L.

    2009-01-01

    Present study will treat the next topics: ecology of the natural and man made environments and functional diversity of bacteria. The microbial communities in artisanal goat cheeses produced in mountain pastures (typical farms) in Piemonte mountain (North of Italy) change a lot during precessing and ripening time. Moreover cheese microbial ecosystems are different in each small dairy because adventitious microflora can come from the environment and contamination the milk before the cheese making process and the product during manufacture and ripening. (Author)

  4. Microbial ecology of artisanal italian cheese: Molecular microbial characterization by culture-independent method

    Energy Technology Data Exchange (ETDEWEB)

    Colombo, E.; Scarpellini, M.; Franzatti, L.; Dioguardi, L.

    2009-07-01

    Present study will treat the next topics: ecology of the natural and man made environments and functional diversity of bacteria. The microbial communities in artisanal goat cheeses produced in mountain pastures (typical farms) in Piemonte mountain (North of Italy) change a lot during precessing and ripening time. Moreover cheese microbial ecosystems are different in each small dairy because adventitious microflora can come from the environment and contamination the milk before the cheese making process and the product during manufacture and ripening. (Author)

  5. On some Indo-Pacific boring endolithic Bivalvia species introduced into the Mediterranean Sea with their host – spread of Sphenia rueppelli A. Adams, 1850

    Directory of Open Access Journals (Sweden)

    A. ZENETOS

    2010-06-01

    Full Text Available The study of the endolithic molluscs found on/in living alien Spondylusshells collected in the Gulf of Iskenderun (Turkey brought to light three more alien bivalvia species namely Petricola hemprichi, Gastrochaena cymbium and Sphenia rueppelli. The presence of Sphenia rueppellideserves attention as it constitutes the first record of this species as living in the Mediterranean Sea. The definitive establishment and spreading of these bivalves in the basin seems to be also attested by careful analysis of specimens sampled in other southern Turkish localities and previously retained in local private collections. The present records raise some questions on the vector of arrival of the species in the Mediterranean Sea that could be strictly connected with their hosts.

  6. Modular spectral imaging system for discrimination of pigments in cells and microbial communities.

    Science.gov (United States)

    Polerecky, Lubos; Bissett, Andrew; Al-Najjar, Mohammad; Faerber, Paul; Osmers, Harald; Suci, Peter A; Stoodley, Paul; de Beer, Dirk

    2009-02-01

    Here we describe a spectral imaging system for minimally invasive identification, localization, and relative quantification of pigments in cells and microbial communities. The modularity of the system allows pigment detection on spatial scales ranging from the single-cell level to regions whose areas are several tens of square centimeters. For pigment identification in vivo absorption and/or autofluorescence spectra are used as the analytical signals. Along with the hardware, which is easy to transport and simple to assemble and allows rapid measurement, we describe newly developed software that allows highly sensitive and pigment-specific analyses of the hyperspectral data. We also propose and describe a number of applications of the system for microbial ecology, including identification of pigments in living cells and high-spatial-resolution imaging of pigments and the associated phototrophic groups in complex microbial communities, such as photosynthetic endolithic biofilms, microbial mats, and intertidal sediments. This system provides new possibilities for studying the role of spatial organization of microorganisms in the ecological functioning of complex benthic microbial communities or for noninvasively monitoring changes in the spatial organization and/or composition of a microbial community in response to changing environmental factors.

  7. Microbial colonization of Ca-sulfate crusts in the hyperarid core of the Atacama Desert: implications for the search for life on Mars.

    Science.gov (United States)

    Wierzchos, J; Cámara, B; de Los Ríos, A; Davila, A F; Sánchez Almazo, I M; Artieda, O; Wierzchos, K; Gómez-Silva, B; McKay, C; Ascaso, C

    2011-01-01

    The scarcity of liquid water in the hyperarid core of the Atacama Desert makes this region one of the most challenging environments for life on Earth. The low numbers of microbial cells in the soils suggest that within the Atacama Desert lies the dry limit for life on our planet. Here, we show that the Ca-sulfate crusts of this hyperarid core are the habitats of lithobiontic micro-organisms. This microporous, translucent substrate is colonized by epilithic lichens, as well as endolithic free-living algae, fungal hyphae, cyanobacteria and non photosynthetic bacteria. We also report a novel type of endolithic community, "hypoendoliths", colonizing the undermost layer of the crusts. The colonization of gypsum crusts within the hyperarid core appears to be controlled by the moisture regime. Our data shows that the threshold for colonization is crossed within the dry core, with abundant colonization in gypsum crusts at one study site, while crusts at a drier site are virtually devoid of life. We show that the cumulative time in 1 year of relative humidity (RH) above 60% is the best parameter to explain the difference in colonization between both sites. This is supported by controlled humidity experiments, where we show that colonies of endolithic cyanobacteria in the Ca-sulfate crust undergo imbibition process at RH >60%. Assuming that life once arose on Mars, it is conceivable that Martian micro-organisms sought refuge in similar isolated evaporite microenvironments during their last struggle for life as their planet turned arid. © 2010 Blackwell Publishing Ltd.

  8. Detection of pigments of halophilic endoliths from gypsum: Raman portable instrument and European Space Agency's prototype analysis

    Science.gov (United States)

    Culka, Adam; Osterrothová, Kateřina; Hutchinson, Ian; Ingley, Richard; McHugh, Melissa; Oren, Aharon; Edwards, Howell G. M.; Jehlička, Jan

    2014-01-01

    A prototype instrument, under development at the University of Leicester, for the future European Space Agency (ESA) ExoMars mission, was used for the analysis of microbial pigments within a stratified gypsum crust from a hypersaline saltern evaporation pond at Eilat (Israel). Additionally, the same samples were analysed using a miniaturized Raman spectrometer, featuring the same 532 nm excitation. The differences in the position of the specific bands, attributed to carotenoid pigments from different coloured layers, were minor when analysed by the ESA prototype instrument; therefore, making it difficult to distinguish among the different pigments. The portable Delta Nu Advantage instrument allowed for the discrimination of microbial carotenoids from the orange/green and purple layers. The purpose of this study was to complement previous laboratory results with new data and experience with portable or handheld Raman systems, even with a dedicated prototype Raman system for the exploration of Mars. The latter is equipped with an excitation wavelength falling within the carotenoid polyene resonance region. The ESA prototype Raman instrument detected the carotenoid pigments (biomarkers) with ease, although further detailed distinctions among them were not achieved. PMID:25368354

  9. Detection of pigments of halophilic endoliths from gypsum: Raman portable instrument and European Space Agency's prototype analysis.

    Science.gov (United States)

    Culka, Adam; Osterrothová, Kateřina; Hutchinson, Ian; Ingley, Richard; McHugh, Melissa; Oren, Aharon; Edwards, Howell G M; Jehlička, Jan

    2014-12-13

    A prototype instrument, under development at the University of Leicester, for the future European Space Agency (ESA) ExoMars mission, was used for the analysis of microbial pigments within a stratified gypsum crust from a hypersaline saltern evaporation pond at Eilat (Israel). Additionally, the same samples were analysed using a miniaturized Raman spectrometer, featuring the same 532 nm excitation. The differences in the position of the specific bands, attributed to carotenoid pigments from different coloured layers, were minor when analysed by the ESA prototype instrument; therefore, making it difficult to distinguish among the different pigments. The portable Delta Nu Advantage instrument allowed for the discrimination of microbial carotenoids from the orange/green and purple layers. The purpose of this study was to complement previous laboratory results with new data and experience with portable or handheld Raman systems, even with a dedicated prototype Raman system for the exploration of Mars. The latter is equipped with an excitation wavelength falling within the carotenoid polyene resonance region. The ESA prototype Raman instrument detected the carotenoid pigments (biomarkers) with ease, although further detailed distinctions among them were not achieved. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  10. Non-destructive sampling of rock-dwelling microbial communities using sterile adhesive tape.

    Science.gov (United States)

    Cutler, Nick A; Oliver, Anna E; Viles, Heather A; Whiteley, Andrew S

    2012-12-01

    Building stone provides a habitat for an array of microorganisms, many of which have been demonstrated to have a deleterious effect on the appearance and/or structural integrity of stone masonry. It is essential to understand the composition and structure of stone-dwelling (lithobiontic) microbial communities if successful stone conservation strategies are to be applied, particularly in the face of global environmental change. Ideally, the techniques used to sample such assemblages should be non-destructive due to the sensitive conservation status of many stone buildings. This paper quantitatively assesses the performance of sterile adhesive tape as a non-destructive sampling technique and compares the results of tape sampling with an alternative, destructive, sampling method. We used DNA fingerprinting (TRFLP) to characterise the algal, fungal and bacterial communities living on a stone slab. Our results demonstrate that tape sampling may be used to collect viable quantities of microbial DNA from environmental samples. This technique is ideally suited to the sampling of microbial biofilms, particularly when these communities are dominated by green algae. It provides a good approximation of total community diversity (i.e. the aggregate diversity of epilithic and endolithic communities). Tape sampling is straightforward, rapid and cost effective. When combined with molecular analytical techniques, this sampling method has the potential to make a major contribution to efforts to understand the structure of lithobiontic microbial communities and our ability to predict the response of such communities to future environmental change. Copyright © 2012 Elsevier B.V. All rights reserved.

  11. Rocky Mountain Spotted Fever

    Science.gov (United States)

    ... with facebook share with twitter share with linkedin Rocky Mountain Spotted Fever Credit: CDC A male cayenne tick, Amblyomma cajennense, ... and New Mexico. Why Is the Study of Rocky Mountain Spotted Fever a Priority for NIAID? Tickborne diseases are becoming ...

  12. Rocky Mountain spotted fever

    Science.gov (United States)

    ... spotted fever on the foot Rocky Mountain spotted fever, petechial rash Antibodies Deer and dog tick References McElligott SC, Kihiczak GG, Schwartz RA. Rocky Mountain spotted fever and other rickettsial infections. In: Lebwohl MG, Heymann ...

  13. Microbial biosensors

    International Nuclear Information System (INIS)

    Le Yu; Chen, Wilfred; Mulchandani, Ashok

    2006-01-01

    A microbial biosensor is an analytical device that couples microorganisms with a transducer to enable rapid, accurate and sensitive detection of target analytes in fields as diverse as medicine, environmental monitoring, defense, food processing and safety. The earlier microbial biosensors used the respiratory and metabolic functions of the microorganisms to detect a substance that is either a substrate or an inhibitor of these processes. Recently, genetically engineered microorganisms based on fusing of the lux, gfp or lacZ gene reporters to an inducible gene promoter have been widely applied to assay toxicity and bioavailability. This paper reviews the recent trends in the development and application of microbial biosensors. Current advances and prospective future direction in developing microbial biosensor have also been discussed

  14. Mountain Plover [ds109

    Data.gov (United States)

    California Natural Resource Agency — Point locations representing observations of mountain plover (Charadrius montanus) feeding and roosting flocks (and occasional individuals) documented during an...

  15. Advances in global mountain geomorphology

    Science.gov (United States)

    Slaymaker, Olav; Embleton-Hamann, Christine

    2018-05-01

    Three themes in global mountain geomorphology have been defined and reinforced over the past decade: (a) new ways of measuring, sensing, and analyzing mountain morphology; (b) a new emphasis on disconnectivity in mountain geomorphology; and (c) the emergence of concerns about the increasing influence of anthropogenic disturbance of the mountain geomorphic environment, especially in intertropical mountains where population densities are higher than in any other mountain region. Anthropogenically induced hydroclimate change increases geomorphic hazards and risks but also provides new opportunities for mountain landscape enhancement. Each theme is considered with respect to the distinctiveness of mountain geomorphology and in relation to important advances in research over the past decade. The traditional reliance on the high energy condition to define mountain geomorphology seems less important than the presence of unique mountain landforms and landscapes and the distinctive ways in which human activity and anthropogenically induced hydroclimate change are transforming mountain landscapes.

  16. Microbial glycoproteomics

    DEFF Research Database (Denmark)

    Halim, Adnan; Anonsen, Jan Haug

    2017-01-01

    Mass spectrometry-based "-omics" technologies are important tools for global and detailed mapping of post-translational modifications. Protein glycosylation is an abundant and important post translational modification widespread throughout all domains of life. Characterization of glycoproteins...... and research in this area is rapidly accelerating. Here, we review recent developments in glycoproteomic technologies with a special focus on microbial protein glycosylation....

  17. Yucca Mountain digital database

    International Nuclear Information System (INIS)

    Daudt, C.R.; Hinze, W.J.

    1992-01-01

    This paper discusses the Yucca Mountain Digital Database (DDB) which is a digital, PC-based geographical database of geoscience-related characteristics of the proposed high-level waste (HLW) repository site of Yucca Mountain, Nevada. It was created to provide the US Nuclear Regulatory Commission's (NRC) Advisory Committee on Nuclear Waste (ACNW) and its staff with a visual perspective of geological, geophysical, and hydrological features at the Yucca Mountain site as discussed in the Department of Energy's (DOE) pre-licensing reports

  18. Education and Yucca Mountain

    International Nuclear Information System (INIS)

    Lamont, M.A.

    1995-01-01

    This paper outlines a middle school social studies curriculum taught in Nevada. The curriculum was designed to educate students about issues related to the Yucca Mountain project. The paper focuses on the activities used in the curriculum

  19. Recreational mountain biking injuries.

    Science.gov (United States)

    Aitken, S A; Biant, L C; Court-Brown, Charles M

    2011-04-01

    Mountain biking is increasing in popularity worldwide. The injury patterns associated with elite level and competitive mountain biking are known. This study analysed the incidence, spectrum and risk factors for injuries sustained during recreational mountain biking. The injury rate was 1.54 injuries per 1000 biker exposures. Men were more commonly injured than women, with those aged 30-39 years at highest risk. The commonest types of injury were wounding, skeletal fracture and musculoskeletal soft tissue injury. Joint dislocations occurred more commonly in older mountain bikers. The limbs were more commonly injured than the axial skeleton. The highest hospital admission rates were observed with head, neck and torso injuries. Protective body armour, clip-in pedals and the use of a full-suspension bicycle may confer a protective effect.

  20. Landforms of High Mountains

    Directory of Open Access Journals (Sweden)

    Derek A. McDougall

    2016-05-01

    Full Text Available Reviewed: Landforms of High Mountains. By Alexander Stahr and Ewald Langenscheidt. Heidelberg, Germany: Springer, 2015. viii + 158 pp. US$ 129.99. Also available as an e-book. ISBN 978-3-642-53714-1.

  1. Acute mountain sickness

    Science.gov (United States)

    ... GO About MedlinePlus Site Map FAQs Customer Support Health Topics Drugs & Supplements Videos & Tools Español You Are Here: Home → Medical Encyclopedia → Acute mountain sickness URL of this page: //medlineplus.gov/ency/article/ ...

  2. YUCCA MOUNTAIN SITE DESCRIPTION

    International Nuclear Information System (INIS)

    Simmons, A.M.

    2004-01-01

    The ''Yucca Mountain Site Description'' summarizes, in a single document, the current state of knowledge and understanding of the natural system at Yucca Mountain. It describes the geology; geochemistry; past, present, and projected future climate; regional hydrologic system; and flow and transport within the unsaturated and saturated zones at the site. In addition, it discusses factors affecting radionuclide transport, the effect of thermal loading on the natural system, and tectonic hazards. The ''Yucca Mountain Site Description'' is broad in nature. It summarizes investigations carried out as part of the Yucca Mountain Project since 1988, but it also includes work done at the site in earlier years, as well as studies performed by others. The document has been prepared under the Office of Civilian Radioactive Waste Management quality assurance program for the Yucca Mountain Project. Yucca Mountain is located in Nye County in southern Nevada. The site lies in the north-central part of the Basin and Range physiographic province, within the northernmost subprovince commonly referred to as the Great Basin. The basin and range physiography reflects the extensional tectonic regime that has affected the region during the middle and late Cenozoic Era. Yucca Mountain was initially selected for characterization, in part, because of its thick unsaturated zone, its arid to semiarid climate, and the existence of a rock type that would support excavation of stable openings. In 1987, the United States Congress directed that Yucca Mountain be the only site characterized to evaluate its suitability for development of a geologic repository for high-level radioactive waste and spent nuclear fuel

  3. YUCCA MOUNTAIN SITE DESCRIPTION

    Energy Technology Data Exchange (ETDEWEB)

    A.M. Simmons

    2004-04-16

    The ''Yucca Mountain Site Description'' summarizes, in a single document, the current state of knowledge and understanding of the natural system at Yucca Mountain. It describes the geology; geochemistry; past, present, and projected future climate; regional hydrologic system; and flow and transport within the unsaturated and saturated zones at the site. In addition, it discusses factors affecting radionuclide transport, the effect of thermal loading on the natural system, and tectonic hazards. The ''Yucca Mountain Site Description'' is broad in nature. It summarizes investigations carried out as part of the Yucca Mountain Project since 1988, but it also includes work done at the site in earlier years, as well as studies performed by others. The document has been prepared under the Office of Civilian Radioactive Waste Management quality assurance program for the Yucca Mountain Project. Yucca Mountain is located in Nye County in southern Nevada. The site lies in the north-central part of the Basin and Range physiographic province, within the northernmost subprovince commonly referred to as the Great Basin. The basin and range physiography reflects the extensional tectonic regime that has affected the region during the middle and late Cenozoic Era. Yucca Mountain was initially selected for characterization, in part, because of its thick unsaturated zone, its arid to semiarid climate, and the existence of a rock type that would support excavation of stable openings. In 1987, the United States Congress directed that Yucca Mountain be the only site characterized to evaluate its suitability for development of a geologic repository for high-level radioactive waste and spent nuclear fuel.

  4. Microbial xanthophylls.

    Science.gov (United States)

    Bhosale, Prakash; Bernstein, Paul S

    2005-09-01

    Xanthophylls are oxygenated carotenoids abundant in the human food supply. Lutein, zeaxanthin, and cryptoxanthin are major xanthophyll carotenoids in human plasma. The consumption of these xanthophylls is directly associated with reduction in the risk of cancers, cardiovascular disease, age-related macular degeneration, and cataract formation. Canthaxanthin and astaxanthin also have considerable importance in aquaculture for salmonid and crustacean pigmentation, and are of commercial interest for the pharmaceutical and food industries. Chemical synthesis is a major source for the heavy demand of xanthophylls in the consumer market; however, microbial producers also have potential as commercial sources. In this review, we discuss the biosynthesis, commercial utility, and major microbial sources of xanthophylls. We also present a critical review of current research and technologies involved in promoting microbes as potential commercial sources for mass production.

  5. Microbial pathways and palaeoenvironmental conditions involved in the formation of phosphorite grains, Safaga District, Egypt

    Science.gov (United States)

    Salama, Walid; El-Kammar, Ahmed; Saunders, Martin; Morsy, Rania; Kong, Charlie

    2015-07-01

    Phosphatic grains of the shallow marine phosphorite deposits of Egypt are classified as either phosphatic bioclasts preserving biological structure (e.g. skeletal fragments such as fish bones and teeth) or phosphatic peloids and intraclasts. This study describes the destructive and constructive microbial pathways represented by bioerosion of bones by endolithic cyanobacteria and accretion of phosphatic peloids by bacteria. The palaeoenvironmental conditions and post-depositional/diagenetic history of these grains have also been considered. Scanning and transmission electron microscopy showed that the phosphatic peloids under transmitted light microscopy are composed mainly of microspheres (0.5 to 2.5 μm) similar in shape and size to coccoid-like bacteria. Chemical mapping showed that these microspheres are composed of carbonate-fluorapatite (CFA) and surrounded by degraded carbonaceous matrix. These grains are suggested to be reworked from pre-existing microbial mats during transgressive-regressive cycles affecting the southern Tethyan Campanian-Maastrichtian shallow continental shelf. The bioerosion of phosphatic bones is characterized by a network of meandering microborings that penetrated inward from the bone surface by endolithic cyanobacteria. The bioerosion of bones resulted in a gradual centripetal digestion and conversion of bones into micritic phosphate peloids. The bioerosion mechanism is probably started in the acidic sheath surrounding cyanobacteria followed by supersaturation of PO4 and reprecipitation of crystalline CFA as electron dense remineralized rims. Electron microprobe microanalyses showed that the remineralized microbored areas are higher in CaO, P2O5, and F and depleted in Cl, relative to unaltered bones. A gradual demineralization of remineralized rims followed by dissolution of cyanobacterial cells is probably occurred during diagenesis and meteoric water alteration leaving behind empty microborings. Bone exposed to meteoric water

  6. Microbial ecology of artisanal Italian Cheese: environment and working conditions

    International Nuclear Information System (INIS)

    Dioguardi, L.; Colombo, E.; Franzetti, L.

    2009-01-01

    In agro-food sector the structural features of working environments and consequently their hygienic conditions are of primary importance for a safe and quality food production and to ensure comfortable and ergonomic working conditions. In particular, as regards high-mountain dairy production, the environment is important because it can affect the development of typical microbial ecosystem. (Author)

  7. Microbial acetate oxidation in horizontal rotating tubular bioreactor

    Indian Academy of Sciences (India)

    Unknown

    shaped partition walls that served as carriers for micro- bial biomass. Mixing ... from soil sample collected from Zagreb mountain. This microbial culture was ... HRTB was made of a plastic tube 1⋅8 m long with an inner diameter of 0⋅25 m.

  8. Microbial ecology of artisanal Italian Cheese: environment and working conditions

    Energy Technology Data Exchange (ETDEWEB)

    Dioguardi, L.; Colombo, E.; Franzetti, L.

    2009-07-01

    In agro-food sector the structural features of working environments and consequently their hygienic conditions are of primary importance for a safe and quality food production and to ensure comfortable and ergonomic working conditions. In particular, as regards high-mountain dairy production, the environment is important because it can affect the development of typical microbial ecosystem. (Author)

  9. Microbial effects

    International Nuclear Information System (INIS)

    Sharpe, V.J.

    1985-10-01

    The long term safety and integrity of radioactive waste disposal sites proposed for use by Ontario Hydro may be affected by the release of radioactive gases. Microbes mediate the primary pathways of waste degradation and hence an assessment of their potential to produce gaseous end products from the breakdown of low level waste was performed. Due to a number of unknown variables, assumptions were made regarding environmental and waste conditions that controlled microbial activity; however, it was concluded that 14 C and 3 H would be produced, albeit over a long time scale of about 1500 years for 14 C in the worst case situation

  10. Mountain Biking Injuries.

    Science.gov (United States)

    Ansari, Majid; Nourian, Ruhollah; Khodaee, Morteza

    With the increasing popularity of mountain biking, also known as off-road cycling, and the riders pushing the sport into extremes, there has been a corresponding increase in injury. Almost two thirds of acute injuries involve the upper extremities, and a similar proportion of overuse injuries affect the lower extremities. Mountain biking appears to be a high-risk sport for severe spine injuries. New trends of injury patterns are observed with popularity of mountain bike trail parks and freeride cycling. Using protective gear, improving technical proficiency, and physical fitness may somewhat decrease the risk of injuries. Simple modifications in bicycle-rider interface areas and with the bicycle (bike fit) also may decrease some overuse injuries. Bike fit provides the clinician with postural correction during the sport. In this review, we also discuss the importance of race-day management strategies and monitoring the injury trends.

  11. Mountain-Plains Curriculum.

    Science.gov (United States)

    Mountain-Plains Education and Economic Development Program, Inc., Glasgow AFB, MT.

    The document lists the Mountain-Plains curriculum by job title (where applicable), including support courses. The curriculum areas covered are mathematics skills, communication skills, office education, lodging services, food services, marketing and distribution, welding support, automotive, small engines, career guidance, World of Work, health…

  12. Injuries in mountain biking.

    Science.gov (United States)

    Gaulrapp, H; Weber, A; Rosemeyer, B

    2001-01-01

    Despite still growing attraction mountain biking as a matter of sports traumatology still lacks relevant data based on large cross-sectional surveys. To obtain an overview of risk factors, types, and main body sites of injuries occurring in mountain biking we assessed the results of a questionnaire answered by 3873 athletes. A total of 8133 single lesions were reported by 3474 athletes, 36% of whom regularly participated in competitions. The incidence of injuries in mountain biking is comparable to that in other outdoor sports, the majority of injuries being minor. Mountain biking athletes were found to have an overall injury risk rate of 0.6% per year and 1 injury per 1000 h of biking. The main risk factors included slippery road surface, cyclist's poor judgement of the situation, and excessive speed, representing personal factors that could be altered by preventive measures. Of all injuries 14% were due to collision with some part of the bike, especially the pedals and the handlebar. While 75% of the injuries were minor, such as skin wounds and simple contusions, 10% were so severe that hospitalization was required. A breakdown of the injuries according to body site and frequency of occurrence is presented.

  13. Rocky Mountain Riparian Digest

    Science.gov (United States)

    Deborah M. Finch

    2008-01-01

    The Rocky Mountain Riparian Digest presents the many facets of riparian research at the station. Included are articles about protecting the riparian habitat, the social and economic values of riparian environments, watershed restoration, remote sensing tools, and getting kids interested in the science.

  14. Rocky Mountain High.

    Science.gov (United States)

    Hill, David

    2001-01-01

    Describes Colorado's Eagle Rock School, which offers troubled teens a fresh start by transporting them to a tuition- free campus high in the mountains. The program encourages spiritual development as well as academic growth. The atmosphere is warm, loving, structured, and nonthreatening. The article profiles several students' experiences at the…

  15. Mountains: top down.

    Science.gov (United States)

    Woodwell, George M

    2004-11-01

    Mountainous regions offer not only essential habitat and resources, including water, to the earth's more than 6 billion inhabitants, but also insights into how the global human habitat works, how it is being changed at the moment as global climates are disrupted, and how the disruption may lead to global biotic and economic impoverishment. At least 600 million of the earth's more than 6 billion humans dwell in mountainous regions. Such regions feed water into all the major rivers of the world whose valleys support most of the rest of us. At least half of the valley dwellers receive part or all of their water from montane sources, many from the melt water of glaciers, others from the annual snow melt. Glaciers are retreating globally as the earth warms as a result of human-caused changes in the composition of the atmosphere. Many are disappearing, a change that threatens municipal water supplies virtually globally. The warming is greatest in the higher latitudes where the largest glaciers such as those of Greenland and the Antarctic Continent have become vulnerable. The melting of ice in the northern hemisphere raises serious concerns about the continued flow of the Gulf Stream and the possibility of massive climatic changes in Scandinavia and northern Europe. Mountains are also biotic islands in the sea life, rich in endemism at the ecotype level. The systematic warming of the earth changes the environment out from under these genetically specialized strains (ecotypes) which are then maladapted and vulnerable to diseases of all types. The process is systematic impoverishment in the pattern conspicuous on mountain slopes with increasing exposure to climatic extremes. It is seen now in the increased mortality and morbidity of plants as climatic changes accumulate. The seriousness of the global climatic disruption is especially clear in any consideration of mountains. It can and must be addressed constructively despite the adamancy of the current US administration.

  16. In situ characterization of the microbiota in Yucca Mountain sediments

    International Nuclear Information System (INIS)

    Ringelberg, D.B.; Stair, J.O.; White, D.C.

    1996-01-01

    A specific goal of the research being performed at the Exploratory Study Facility (ESF), Yucca Mountain, NV, is the characterization of the microbiota surrounding the proposed high level nuclear waste repository site. Research has been initiated whereby not only the magnitude but also the extent of microbial colonization of the volcanic tuffs is being measured. By performing this research it was postulated that assessments of the potential for microbially facilitated transport of radioactive material away from the repository site could be made. In order to quantify the extant microbiota in situ, it was necessary to utilize techniques independent of the need for culture and isolation of the organisms. Through the analysis of cellular lipid components we were able to provide an estimation of microbial cell numbers and community composition in these volcanic tuff sediments

  17. DOE's Yucca Mountain studies

    International Nuclear Information System (INIS)

    1992-12-01

    This booklet is about the disposal of high-level nuclear waste in the United States. It is for readers who have a general rather than a technical background. It discusses why scientists and engineers thinkhigh-level nuclear waste may be disposed of safely underground. It also describes why Yucca Mountain, Nevada, is being studied as a potential repository site and provides basic information about those studies

  18. Yucca Mountain Milestone

    International Nuclear Information System (INIS)

    Hunt, Rod

    1997-01-01

    The Department of Energy project to determine if the Yucca Mountain site in Nevada is suitable for geologic disposal of high-level nuclear waste reached a major milestone in late April when a 25-foot-diameter tunnel boring machine ''holed through'' completing a five-mile-long, horseshoe-shaped excavation through the mountain. When the cutting-head of the giant machine broke through to daylight at the tunnel's south portal, it ended a 2 1/2-year excavation through the mountain that was completed ahead of schedule and with an outstanding safety record. Video of the event was transmitted live by satellite to Washington, DC, where it was watched by Secretary of Energy Frederico Pena and other high-level DOE officials, signifying the importance of the project's mission to find a repository for high-level nuclear waste and spent nuclear fuel produced by nuclear power plants. This critical undertaking is being performed by DOE's Office of Civilian Radioactive Waste Management (OCRWM). The tunnel is the major feature of the Exploratory Studies Facility (ESF), which serves as an underground laboratory for engineers and scientists to help determine if Yucca Mountain is suitable to serve as a repository for the safe disposal of high-level nuclear waste. Morrison Knudsen's Environmental/Government Group is providing design and construction-management services on the project. The MK team is performing final design for the ESF and viability assessment design for the underground waste repository that will be built only if the site is found suitable for such a mission. In fact, if at anytime during the ESF phase, the site is found unsuitable, the studies will be stopped and the site restored to its natural state

  19. Filamentous hydrous ferric oxide biosignatures in a pipeline carrying acid mine drainage at Iron Mountain Mine, California

    Science.gov (United States)

    Williams, Amy J.; Alpers, Charles N.; Sumner, Dawn Y.; Campbell, Kate M.

    2017-01-01

    A pipeline carrying acidic mine effluent at Iron Mountain, CA, developed Fe(III)-rich precipitate caused by oxidation of Fe(II)aq. The native microbial community in the pipe included filamentous microbes. The pipe scale consisted of microbial filaments, and schwertmannite (ferric oxyhydroxysulfate, FOHS) mineral spheres and filaments. FOHS filaments contained central lumina with diameters similar to those of microbial filaments. FOHS filament geometry, the geochemical environment, and the presence of filamentous microbes suggest that FOHS filaments are mineralized microbial filaments. This formation of textural biosignatures provides the basis for a conceptual model for the development and preservation of biosignatures in other environments.

  20. ACUTE MOUNTAIN SICKNESS

    Directory of Open Access Journals (Sweden)

    Jakub Krzeszowiak

    2012-03-01

    Full Text Available This paper presents the most likely pathophysiological causes of the development of acute mountain sickness (AMS, also known as altitude sickness, its pulmonary form i.e. high altitude pulmonary edema (HAPE, and high altitude cerebral edema (HACE. These diseases constitute extraordinary environmental hazards because they are directly connected with low atmospheric pressure, and thus low partial oxygen pressure. The above adverse atmospheric conditions start to affect humans already at an altitude of 2,500 meters above the sea level and, coupled with extreme physical exertion, can quickly lead to respiratory alkalosis, which is not present under any other conditions in the lowlands. Mountaineering above 4,500 m a.s.l. leads to hypoxia of internal organs and, primarily, reduced renal perfusion with all its consequences. The above adverse changes, combined with inadequate acclimatization, can lead to a situation of imminent danger to life and health. This paper describes in detail the consequences of acute mountain sickness, which can ultimately lead to the development of AMS and one of severe forms of HACE and/or HAPE.

  1. Microbial micropatches within microbial hotspots

    Science.gov (United States)

    Smith, Renee J.; Tobe, Shanan S.; Paterson, James S.; Seymour, Justin R.; Oliver, Rod L.; Mitchell, James G.

    2018-01-01

    The spatial distributions of organism abundance and diversity are often heterogeneous. This includes the sub-centimetre distributions of microbes, which have ‘hotspots’ of high abundance, and ‘coldspots’ of low abundance. Previously we showed that 300 μl abundance hotspots, coldspots and background regions were distinct at all taxonomic levels. Here we build on these results by showing taxonomic micropatches within these 300 μl microscale hotspots, coldspots and background regions at the 1 μl scale. This heterogeneity among 1 μl subsamples was driven by heightened abundance of specific genera. The micropatches were most pronounced within hotspots. Micropatches were dominated by Pseudomonas, Bacteroides, Parasporobacterium and Lachnospiraceae incertae sedis, with Pseudomonas and Bacteroides being responsible for a shift in the most dominant genera in individual hotspot subsamples, representing up to 80.6% and 47.3% average abundance, respectively. The presence of these micropatches implies the ability these groups have to create, establish themselves in, or exploit heterogeneous microenvironments. These genera are often particle-associated, from which we infer that these micropatches are evidence for sub-millimetre aggregates and the aquatic polymer matrix. These findings support the emerging paradigm that the microscale distributions of planktonic microbes are numerically and taxonomically heterogeneous at scales of millimetres and less. We show that microscale microbial hotspots have internal structure within which specific local nutrient exchanges and cellular interactions might occur. PMID:29787564

  2. Description of Taphrina antarctica f.a. sp. nov., a new anamorphic ascomycetous yeast species associated with Antarctic endolithic microbial communities and transfer of four Lalaria species in the genus Taphrina.

    Science.gov (United States)

    Selbmann, Laura; Turchetti, Benedetta; Yurkov, Andrey; Cecchini, Clarissa; Zucconi, Laura; Isola, Daniela; Buzzini, Pietro; Onofri, Silvano

    2014-07-01

    In the framework of a large-scale rock sampling in Continental Antarctica, a number of yeasts have been isolated. Two strains that are unable to grow above 20 °C and that have low ITS sequence similarities with available data in the public domain were found. The D1/D2 LSU molecular phylogeny placed them in an isolated position in the genus Taphrina, supporting their affiliation to a not yet described species. Because the new species is able to grow in its anamorphic state only, the species Taphrina antarctica f.a. (forma asexualis) sp. nov. has been proposed to accommodate both strains (type strain DBVPG 5268(T), DSM 27485(T) and CBS 13532(T)). Lalaria and Taphrina species are dimorphic ascomycetes, where the anamorphic yeast represents the saprotrophic state and the teleomorph is the parasitic counterpart on plants. This is the first record for this genus in Antarctica; since plants are absent on the continent, we hypothesize that the fungus may have focused on the saprotrophic part of its life cycle to overcome the absence of its natural host and adapt environmental constrains. Following the new International Code of Nomenclature for Algae, Fungi and Plants (Melbourne Code 2011) the reorganization of Taphrina-Lalaria species in the teleomorphic genus Taphrina is proposed. We emend the diagnosis of the genus Taphrina to accommodate asexual saprobic states of these fungi. Taphrina antarctica was registered in MycoBank under MB 808028.

  3. A program to assess microbial impacts on nuclear waste containment

    International Nuclear Information System (INIS)

    Horn, J.; Meike, A.

    1996-01-01

    In this paper we discuss aspects of a comprehensive program to identify and bound potential effects of microorganisms on long-term nuclear waste containment, using as examples, studies conducted within the Yucca Mountain Project. A comprehensive program has been formulated which cuts across standard disciplinary lines to address the specific concerns of microbial activity in a radioactive waste repository. Collectively, this program provides bounding parameters of microbial activities that modify the ambient geochemistry and hydrology, modify corrosion rates, and transport and transform radionuclides under conditions expected to be encountered after geological waste emplacement. This program is intended to provide microbial reaction rates and bounding conditions in a form that can be integrated into existing chemical and hydrological models. The inclusion of microbial effects will allow those models to more accurately assess long term repository integrity

  4. "Christ is the Mountain"

    Directory of Open Access Journals (Sweden)

    Carl Hallencreutz

    1979-01-01

    Full Text Available In this paper the author focuses on the religious function of symbols in the encounter and interaction of Christianity and other religions. Some observations on the religious function of the symbol of the Holy Mountain in different African contexts are presented. These contexts are a traditional Kikuyu religion, b a Christian hymn from Northern Tanzania, and c the New Year's Fiest of the independent Nazaretha Church among Zulu in South Africa. The examples of how the symbol of the holy mountain is used in different religious contexts in Africa are, of course, too limited to provide a basis for far-reaching generalizations on how symbols function religiously in the encounter of Christianity and other religions. However, this kind of analysis can be applied also when studying other encounters of religions inside and outside Africa. The symbol functions both as a carrier of a new religious message and as an indigenous means to appropriate this message locally and give it adequate form in different milieus. The symbols, which most likely have the religious functions are those which are of a general nature; light, way, living water, and which some are tempted to speak of as archetypes. Yet the comparison between the Chagga-hymn to the holy mountain and Shembe's interpretation of the blessing of the New Year's Fiest on Inhlangakozi indicates, that in the encounter of Christianity and other religions it is not only the symbols as such which produce the local appropriation of the new religious message and give it adequate localized form. Not even in the encounter of Christianity and other religions the symbols function religiously without human beings as actors in the historical process.

  5. Human impacts to mountain streams

    Science.gov (United States)

    Wohl, Ellen

    2006-09-01

    Mountain streams are here defined as channel networks within mountainous regions of the world. This definition encompasses tremendous diversity of physical and biological conditions, as well as history of land use. Human effects on mountain streams may result from activities undertaken within the stream channel that directly alter channel geometry, the dynamics of water and sediment movement, contaminants in the stream, or aquatic and riparian communities. Examples include channelization, construction of grade-control structures or check dams, removal of beavers, and placer mining. Human effects can also result from activities within the watershed that indirectly affect streams by altering the movement of water, sediment, and contaminants into the channel. Deforestation, cropping, grazing, land drainage, and urbanization are among the land uses that indirectly alter stream processes. An overview of the relative intensity of human impacts to mountain streams is provided by a table summarizing human effects on each of the major mountainous regions with respect to five categories: flow regulation, biotic integrity, water pollution, channel alteration, and land use. This table indicates that very few mountains have streams not at least moderately affected by land use. The least affected mountainous regions are those at very high or very low latitudes, although our scientific ignorance of conditions in low-latitude mountains in particular means that streams in these mountains might be more altered than is widely recognized. Four case studies from northern Sweden (arctic region), Colorado Front Range (semiarid temperate region), Swiss Alps (humid temperate region), and Papua New Guinea (humid tropics) are also used to explore in detail the history and effects on rivers of human activities in mountainous regions. The overview and case studies indicate that mountain streams must be managed with particular attention to upstream/downstream connections, hillslope

  6. Protected areas in mountains

    Directory of Open Access Journals (Sweden)

    Hamilton, L. S.

    2006-12-01

    Full Text Available

    The importance of a global Protected Areas Network in sustaining appropriate mountain development is presented in this paper. Present status of the world’s “official” Protected Areas in the UN List, and the proportion that are in mountain areas, and including international designations (World Heritage and Biosphere Reserves. Current and future challenges in the management of these special areas are also commented.



    El autor destaca la importancia de una Red Mundial de Espacios Protegidos para el desarrollo sostenible de las montañas. Comenta luego el estatus actual de las Áreas Protegidas “oficiales” del Mundo en la Lista de las Naciones Unidas y qué proporción de ellas forma parte de las montañas, sin olvidar las figuras internacionales de protección como Patrimonio de la Humanidad y Reservas de Biosfera. Para terminar, se discuten los problemas de gestión actuales y futuros de estas áreas tan especiales

  7. SP mountain data analysis

    Science.gov (United States)

    Rawson, R. F.; Hamilton, R. E.; Liskow, C. L.; Dias, A. R.; Jackson, P. L.

    1981-01-01

    An analysis of synthetic aperture radar data of SP Mountain was undertaken to demonstrate the use of digital image processing techniques to aid in geologic interpretation of SAR data. These data were collected with the ERIM X- and L-band airborne SAR using like- and cross-polarizations. The resulting signal films were used to produce computer compatible tapes, from which four-channel imagery was generated. Slant range-to-ground range and range-azimuth-scale corrections were made in order to facilitate image registration; intensity corrections were also made. Manual interpretation of the imagery showed that L-band represented the geology of the area better than X-band. Several differences between the various images were also noted. Further digital analysis of the corrected data was done for enhancement purposes. This analysis included application of an MSS differencing routine and development of a routine for removal of relief displacement. It was found that accurate registration of the SAR channels is critical to the effectiveness of the differencing routine. Use of the relief displacement algorithm on the SP Mountain data demonstrated the feasibility of the technique.

  8. 11 Soil Microbial Biomass

    African Journals Online (AJOL)

    186–198. Insam H. (1990). Are the soil microbial biomass and basal respiration governed by the climatic regime? Soil. Biol. Biochem. 22: 525–532. Insam H. D. and Domsch K. H. (1989). Influence of microclimate on soil microbial biomass. Soil Biol. Biochem. 21: 211–21. Jenkinson D. S. (1988). Determination of microbial.

  9. Molecular microbial ecology manual

    NARCIS (Netherlands)

    Kowalchuk, G.A.; Bruijn, de F.J.; Head, I.M.; Akkermans, A.D.L.

    2004-01-01

    The field of microbial ecology has been revolutionized in the past two decades by the introduction of molecular methods into the toolbox of the microbial ecologist. This molecular arsenal has helped to unveil the enormity of microbial diversity across the breadth of the earth's ecosystems, and has

  10. Microbial Rechargeable Battery

    NARCIS (Netherlands)

    Molenaar, Sam D.; Mol, Annemerel R.; Sleutels, Tom H.J.A.; Heijne, Ter Annemiek; Buisman, Cees J.N.

    2016-01-01

    Bioelectrochemical systems hold potential for both conversion of electricity into chemicals through microbial electrosynthesis (MES) and the provision of electrical power by oxidation of organics using microbial fuel cells (MFCs). This study provides a proof of concept for a microbial

  11. Childhood microbial keratitis

    Directory of Open Access Journals (Sweden)

    Abdullah G Al Otaibi

    2012-01-01

    Conclusion: Children with suspected microbial keratitis require comprehensive evaluation and management. Early recognition, identifying the predisposing factors and etiological microbial organisms, and instituting appropriate treatment measures have a crucial role in outcome. Ocular trauma was the leading cause of childhood microbial keratitis in our study.

  12. Initial studies to assess microbial impacts on nuclear waste disposal

    International Nuclear Information System (INIS)

    Horn, J.M.; Meike, A.; McCright, R.D.; Economides, B.

    1996-01-01

    The impacts of the native and introduced bacteria on the performance of geologic nuclear waste disposal facilities should be evaluated because these bacteria could promote corrosion of repository components and alteration of chemical and hydrological properties of the surrounding engineered and rock barriers. As a first step towards investigating these potentialities, native and introduced bacteria obtained from post-construction Yucca Mountain (YM) rock were isolated under varying conditions, including elevated temperature, low nutrient availability, and the absence of available oxygen. Individual isolates are being screened for activities associated with microbially induced corrosion of metals (MIC). Preliminary determination of growth rates of whole YM microbial communities under varying conditions was also undertaken

  13. YUCCA MOUNTAIN PROJECT - A BRIEFING -

    International Nuclear Information System (INIS)

    2003-01-01

    This report has the following articles: Nuclear waste--a long-term national problem; Spent nuclear fuel; High-level radioactive waste; Radioactivity and the environment; Current storage methods; Disposal options; U.S. policy on nuclear waste; The focus on Yucca Mountain; The purpose and scope of the Yucca Mountain Project; The approach for permanently disposing of waste; The scientific studies at Yucca Mountain; The proposed design for a repository at Yucca Mountain; Natural and engineered barriers would work together to isolate waste; Meticulous science and technology to protect people and the environment; Licensing a repository; Transporting waste to a permanent repository; The Environmental Impact Statement for a repository; Current status of the Yucca Mountain Project; and Further information available on the Internet

  14. European mountain biodiversity

    Directory of Open Access Journals (Sweden)

    Nagy, Jennifer

    1998-12-01

    Full Text Available This paper, originally prepared as a discussion document for the ESF Exploratory Workshop «Trends in European Mountain Biodiversity - Research Planning Workshop», provides an overview of current mountain biodiversity research in Europe. It discusses (a biogeographical trends, (b the general properties of biodiversity, (c environmental factors and the regulation of biodiversity with respect to ecosystem function, (d the results of research on mountain freshwater ecosystems, and (e climate change and air pollution dominated environmental interactions.- The section on biogeographical trends highlights the importance of altitude and latitude on biodiversity. The implications of the existence of different scales over the different levels of biodiversity and across organism groups are emphasised as an inherent complex property of biodiversity. The discussion on ecosystem function and the regulation of biodiversity covers the role of environmental factors, productivity, perturbation, species migration and dispersal, and species interactions in the maintenance of biodiversity. Regional and long-term temporal patterns are also discussed. A section on the relatively overlooked topic of mountain freshwater ecosystems is presented before the final topic on the implications of recent climate change and air pollution for mountain biodiversity.

    [fr] Ce document a été préparé à l'origine comme une base de discussion pour «ESF Exploratory Workshop» intitulé «Trends in European Mountain Biodiversity - Research Planning Workshop»; il apporte une vue d'ensemble sur les recherches actuelles portant sur la biodiversité des montagnes en Europe. On y discute les (a traits biogéographiques, (b les caractéristiques générales- de la biodiversité, (c les facteurs environnementaux et la régulation de la biodiversité par rapport à la fonction des écosystèmes, (d les résultats des études sur les écosystèmes aquatiques des montagnes et (e les

  15. Geology at Yucca Mountain

    International Nuclear Information System (INIS)

    Anon.

    1993-01-01

    Both advocates and critics disagree on the significance and interpretation of critical geological features which bear on the safety and suitability of Yucca Mountain as a site for the construction of a high-level radioactive waste repository. Critics believe that there is sufficient geological evidence to rule the site unsuitable for further investigation. Some advocates claim that there is insufficient data and that investigations are incomplete, while others claim that the site is free of major obstacles. We have expanded our efforts to include both the critical evaluations of existing geological and geochemical data and the collection of field data and samples for the purpose of preparing scientific papers for submittal to journals. Summaries of the critical reviews are presented in this paper

  16. The Yucca Mountain tours

    International Nuclear Information System (INIS)

    Shepard, N.F.; Champagne, D.L.

    1992-01-01

    In 1978, Mderthaner et al. observed that opposition to nuclear facilities was lowest near the facility. This suggested that opposition decreased as familiarity with the facility increased, with distance from the facility as an inverse measure of familiarity. In this paper, the authors analyze data from the literature supporting this hypothesis and examine a poll of 1200 public visitors to the candidate repository site at Yucca Mountain, Nevada, in March through June 1991. The tour poll and independent pools show that most Nevadans support the present scientific investigation of the site while opposing the repository. Among the visitors, support for the investigation increased from 66 to 90 percent, which we attribute to increased familiarity

  17. In situ dynamics of O2, pH, light and photosynthesis in ikaite tufa columns (Ikka Fjord, Greenland – a unique microbial habitat.

    Directory of Open Access Journals (Sweden)

    Erik Christian Løvbjerg Trampe

    2016-05-01

    Full Text Available The Ikka Fjord (SW Greenland harbors a unique microbial habitat in the form of several hundred submarine tufa columns composed of ikaite, a special hexahydrate form of calcium carbonate that precipitates when alkaline phosphate- and carbonate-enriched spring water seeping out of the sea floor meets cold seawater. While several unique heterotrophic microbes have been isolated from the tufa columns, the microbial activity and the boundary conditions for microbial growth in ikaite have remained unexplored. We present the first detailed in situ characterization of the physico-chemical microenvironment and activity of oxygenic phototrophs thriving within the ikaite columns. In situ underwater microsensor measurements of pH, temperature, and irradiance in the porous ikaite crystal matrix, revealed an extreme microenvironment characterized by low temperatures, strong light attenuation, and gradients of pH changing from pH 9 at the outer column surface to above pH 10 over the first 1-2 cm of the ikaite. This outer layer of the freshly deposited ikaite matrix contained densely pigmented yellow and green zones harboring a diverse phototrophic community dominated by diatoms and cyanobacteria, respectively, as shown by amplicon sequencing. In situ O2 measurements, as well as underwater variable chlorophyll fluorescence measurements of photosynthetic activity, demonstrated high levels of oxygenic photosynthesis in this extreme gradient environment with strong irradiance-driven O2 dynamics ranging from anoxia to hyperoxic conditions in the ikaite matrix, albeit the local formation of gas bubbles buffered the day-night dynamics of O2 in the tufa columns. The microbial phototrophs in the ikaite matrix are embedded in exopolymers forming endolithic biofilms that may interact with mineral formation and cementing of ikaite crystals.

  18. In situ Dynamics of O2, pH, Light, and Photosynthesis in Ikaite Tufa Columns (Ikka Fjord, Greenland)-A Unique Microbial Habitat.

    Science.gov (United States)

    Trampe, Erik C L; Larsen, Jens E N; Glaring, Mikkel A; Stougaard, Peter; Kühl, Michael

    2016-01-01

    The Ikka Fjord (SW Greenland) harbors a unique microbial habitat in the form of several hundred submarine tufa columns composed of ikaite, a special hexahydrate form of calcium carbonate that precipitates when alkaline phosphate- and carbonate-enriched spring water seeping out of the sea floor meets cold seawater. While several unique heterotrophic microbes have been isolated from the tufa columns, the microbial activity, and the boundary conditions for microbial growth in ikaite have remained unexplored. We present the first detailed in situ characterization of the physico-chemical microenvironment and activity of oxygenic phototrophs thriving within the ikaite columns. In situ underwater microsensor measurements of pH, temperature, and irradiance in the porous ikaite crystal matrix, revealed an extreme microenvironment characterized by low temperatures, strong light attenuation, and gradients of pH changing from pH 9 at the outer column surface to above pH 10 over the first 1-2 cm of the ikaite. This outer layer of the freshly deposited ikaite matrix contained densely pigmented yellow and green zones harboring a diverse phototrophic community dominated by diatoms and cyanobacteria, respectively, as shown by amplicon sequencing. In situ O2 measurements, as well as underwater variable chlorophyll fluorescence measurements of photosynthetic activity, demonstrated high levels of oxygenic photosynthesis in this extreme gradient environment with strong irradiance-driven O2 dynamics ranging from anoxia to hyperoxic conditions in the ikaite matrix, albeit the local formation of gas bubbles buffered the day-night dynamics of O2 in the tufa columns. The microbial phototrophs in the ikaite matrix are embedded in exopolymers forming endolithic biofilms that may interact with mineral formation and cementing of ikaite crystals.

  19. In situ Dynamics of O2, pH, Light, and Photosynthesis in Ikaite Tufa Columns (Ikka Fjord, Greenland)—A Unique Microbial Habitat

    Science.gov (United States)

    Trampe, Erik C. L.; Larsen, Jens E. N.; Glaring, Mikkel A.; Stougaard, Peter; Kühl, Michael

    2016-01-01

    The Ikka Fjord (SW Greenland) harbors a unique microbial habitat in the form of several hundred submarine tufa columns composed of ikaite, a special hexahydrate form of calcium carbonate that precipitates when alkaline phosphate- and carbonate-enriched spring water seeping out of the sea floor meets cold seawater. While several unique heterotrophic microbes have been isolated from the tufa columns, the microbial activity, and the boundary conditions for microbial growth in ikaite have remained unexplored. We present the first detailed in situ characterization of the physico-chemical microenvironment and activity of oxygenic phototrophs thriving within the ikaite columns. In situ underwater microsensor measurements of pH, temperature, and irradiance in the porous ikaite crystal matrix, revealed an extreme microenvironment characterized by low temperatures, strong light attenuation, and gradients of pH changing from pH 9 at the outer column surface to above pH 10 over the first 1–2 cm of the ikaite. This outer layer of the freshly deposited ikaite matrix contained densely pigmented yellow and green zones harboring a diverse phototrophic community dominated by diatoms and cyanobacteria, respectively, as shown by amplicon sequencing. In situ O2 measurements, as well as underwater variable chlorophyll fluorescence measurements of photosynthetic activity, demonstrated high levels of oxygenic photosynthesis in this extreme gradient environment with strong irradiance-driven O2 dynamics ranging from anoxia to hyperoxic conditions in the ikaite matrix, albeit the local formation of gas bubbles buffered the day-night dynamics of O2 in the tufa columns. The microbial phototrophs in the ikaite matrix are embedded in exopolymers forming endolithic biofilms that may interact with mineral formation and cementing of ikaite crystals. PMID:27242741

  20. A mountain of millipedes IV

    DEFF Research Database (Denmark)

    Enghoff, Henrik

    2016-01-01

    Two species of the genus Prionopetalum Attems, 1909, are recorded from the Udzungwa Mountains: P. asperginis sp. nov. and P. kraepelini (Attems, 1896). Prionopetalum stuhlmanni Attems, 1914, is synonymized under P. kraepelini. Odontopyge fasciata Attems, 1896, is transferred from Prionopetalum...

  1. The Table Mountain Field Site

    Data.gov (United States)

    Federal Laboratory Consortium — The Table Mountain Field Site, located north of Boulder, Colorado, is designated as an area where the magnitude of strong, external signals is restricted (by State...

  2. Geography and Weather: Mountain Meterology.

    Science.gov (United States)

    Mogil, H. Michael; Collins, H. Thomas

    1990-01-01

    Provided are 26 ideas to help children explore the effects of mountains on the weather. Weather conditions in Nepal and Colorado are considered separately. Nine additional sources of information are listed. (CW)

  3. Extinction of Harrington's mountain goat

    International Nuclear Information System (INIS)

    Mead, J.I.; Martin, P.S.; Euler, R.C.; Long, A.; Jull, A.J.T.; Toolin, L.J.; Donahue, D.J.; Linick, T.W.

    1986-01-01

    Keratinous horn sheaths of the extinct Harrington's mountain goat, Oreamnos harringtoni, were recovered at or near the surface of dry caves of the Grand Canyon, Arizona. Twenty-three separate specimens from two caves were dated nondestructively by the tandem accelerator mass spectrometer (TAMS). Both the TAMS and the conventional dates indicate that Harrington's mountain goat occupied the Grand Canyon for at least 19,000 years prior to becoming extinct by 11,160 +/- 125 radiocarbon years before present. The youngest average radiocarbon dates on Shasta ground sloths, Nothrotheriops shastensis, from the region are not significantly younger than those on extinct mountain goats. Rather than sequential extinction with Harrington's mountain goat disappearing from the Grand Canyon before the ground sloths, as one might predict in view of evidence of climatic warming at the time, the losses were concurrent. Both extinctions coincide with the regional arrival of Clovis hunters

  4. The Dilemma of Mountain Roads

    Science.gov (United States)

    Mountain roads and trails are proliferating throughout developing Southeast Asia with severe but largely unrecognized long-term consequences related to effects of landslides and surface erosion on communities and downstream resources.

  5. Yucca Mountain Project public interactions

    International Nuclear Information System (INIS)

    Reilly, B.E.

    1990-01-01

    The US Department of Energy (DOE) is committed to keeping the citizens of Nevada informed about activities that relate to the high-level nuclear waste repository program. This paper presents an overview of the Yucca Mountain Project's public interaction philosophy, objectives, activities and experiences during the two years since Congress directed the DOE to conduct site characterization activities only for the Yucca Mountain site

  6. Microbial electrosynthetic cells

    Energy Technology Data Exchange (ETDEWEB)

    May, Harold D.; Marshall, Christopher W.; Labelle, Edward V.

    2018-01-30

    Methods are provided for microbial electrosynthesis of H.sub.2 and organic compounds such as methane and acetate. Method of producing mature electrosynthetic microbial populations by continuous culture is also provided. Microbial populations produced in accordance with the embodiments as shown to efficiently synthesize H.sub.2, methane and acetate in the presence of CO.sub.2 and a voltage potential. The production of biodegradable and renewable plastics from electricity and carbon dioxide is also disclosed.

  7. The origins of mountain geoecology

    Directory of Open Access Journals (Sweden)

    Ives, Jack D.

    2012-05-01

    Full Text Available Mountain geoecology, as a sub-discipline of Geography, stems from the life and work of Carl Troll who, in turn, was inspired by the philosophy and mountain travels of Alexander von Humboldt. As founding chair of the IGU Commission on High-Altitude Geoecology (1968, Troll laid the foundations for inter-disciplinary and international mountain research. The paper traces the evolution of the Commission and its close links with the UNESCO Man and Biosphere Programme (1972- and the United Nations University’s mountain Project (1978-. This facilitated the formation of a major force for inclusion of a mountain chapter in AGENDA 21 during the 1992 Rio de Janeiro Herat Summit (UNCED and the related designation by the United Nations of 2002 as the International Year of Mountains. In this way, mountain geoecology not only contributed to worldwide mountain research but also entered the political arena in the struggle for sustainable mountain development and the well-being of mountain people.La geoecología de montaña, como sub-disciplina de la Geografía, entronca con la vida y trabajo de Carl Troll, quien, a su vez, fue inspirado por la filosofía y viajes de Alexander von Humboldt. Como presidente fundador de la comisión de la UGI sobre High Altitude Geoecology (1968, Troll colocó las bases para la investigación interdisciplinar e internacional de las montañas. Este trabajo presenta la evolución de la Comisión y sus estrechas relaciones con el Programa Hombre y Biosfera de UNESCO (1972- y con el Proyecto de montaña de la Universidad de Naciones Unidas (1978-. Esto facilitó la inclusión de un capítulo sobre la montaña en AGENDA 21 durante la Cumbre de la Tierra de Río de Janeiro (UNCED, y la consiguiente designación de 2002 como el Año Internacional de las Montañas por parte de Naciones Unidas. En este sentido, la geoecología de montaña no sólo contribuyó a la investigación de las montañas del mundo sino que también empujó a la pol

  8. Microbial effects on colloidal agglomeration

    International Nuclear Information System (INIS)

    Hersman, L.

    1995-11-01

    Colloidal particles are known to enhance the transport of radioactive metals through soil and rock systems. This study was performed to determine if a soil microorganism, isolated from the surface samples collected at Yucca Mountain, NV, could affect the colloidal properties of day particles. The agglomeration of a Wyoming bentonite clay in a sterile uninoculated microbial growth medium was compared to the agglomeration in the medium inoculated with a Pseudomonas sp. In a second experiment, microorganisms were cultured in the succinate medium for 50 h and removed by centrifugation. The agglomeration of the clay in this spent was compared to sterile uninoculated medium. In both experiments, the agglomeration of the clay was greater than that of the sterile, uninoculated control. Based on these results, which indicate that this microorganism enhanced the agglomeration of the bentonite clay, it is possible to say that in the presence of microorganisms colloidal movement through a rock matrix could be reduced because of an overall increase in the size of colloidal particle agglomerates. 32 refs

  9. Microbial accumulation of uranium

    International Nuclear Information System (INIS)

    Zhang Wei; Dong Faqin; Dai Qunwei

    2005-01-01

    The mechanism of microbial accumulation of uranium and the effects of some factors (including pH, initial uranium concentration, pretreatment of bacteria, and so on) on microbial accumulation of uranium are discussed briefly. The research direction and application prospect are presented. (authors)

  10. MICROBIAL FUEL CELL

    DEFF Research Database (Denmark)

    2008-01-01

    A novel microbial fuel cell construction for the generation of electrical energy. The microbial fuel cell comprises: (i) an anode electrode, (ii) a cathode chamber, said cathode chamber comprising an in let through which an influent enters the cathode chamber, an outlet through which an effluent...

  11. Microbial control of pollution

    Energy Technology Data Exchange (ETDEWEB)

    Fry, J C; Gadd, G M; Herbert, R A; Jones, C W; Watson-Craik, I A [eds.

    1992-01-01

    12 papers are presented on the microbial control of pollution. Topics covered include: bioremediation of oil spills; microbial control of heavy metal pollution; pollution control using microorganisms and magnetic separation; degradation of cyanide and nitriles; nitrogen removal from water and waste; and land reclamation and restoration.

  12. Microbial Transformations of Actinides and Fission Products in Radioactive Waste

    Energy Technology Data Exchange (ETDEWEB)

    Francis, A. J. [Pohang Univ. Science and Technology, Pohang (Korea, Republic of)

    2011-07-01

    The environmental factors that can affect microbial growth and activity include moisture, temperature, ph, Eh, availability of organic and inorganic nutrients, and radiation. The microbial activity in a specific repository is influenced by the ambient environment of the repository, and the materials to be emplaced. For example, a repository in unsaturated igneous rock formations such as volcanic tuff rocks at Yucca Mountain is generally expected to be oxidizing; a repository in a hydrologically expected to be oxidizing; a repository in a hydrologically saturated zone, especially in sedimentary rocks, could be reducing. Sedimentary rocks contain a certain amount of organic matter, which may stimulate microbial activities and, thus maintain the repository and its surrounding areas at reducing conditions. Although the impacts of microbial activity on high-level nuclear waste and the long-term performance of the repository have not fully investigated, little microbial activity is expected in the near-field because of the radiation, lack of nutrients and the harsh conditions. However in the far-field microbial effects could be significant. Much of our understanding of the microbial effects on radionuclides stems from studies conducted with selected transuranic elements and fission products and limited studies with low-level radioactive wastes. Significant aerobic- and anaerobic-microbial activity is expected to occur in the waste because of the presence of electron donors and acceptors. The actinides initially may be present as soluble- or insoluble-forms but, after disposal, may be converted from one to the other by microorganisms. The direct enzymatic or indirect non-enzymatic actions of microbes could alter the speciation, solubility, and sorption properties of the actinides, thereby increasing or decreasing their concentrations in solution.

  13. Mountain biking injuries: a review.

    Science.gov (United States)

    Carmont, Michael R

    2008-01-01

    Mountain biking is a fast, exciting adventure sport with increasing numbers of participants and competitions. A search of PubMed, Medline, CINAHL, DH data, and Embase databases was performed using the following keywords: mountain, biking and injuries. This revealed 2 review articles, 17 case controlled studies, 4 case series and 5 case reports. This review summarises the published literature on mountain biking injuries, discusses injury frequency and common injury mechanisms. Riders are quick to adopt safety measures. Helmet usage is now increasingly common and handlebar adaptations have been discontinued. Although the sport has a reputation for speed and risk with research and awareness, injury prevention measures are being adopted making the sport as safe as possible.

  14. The Olympic Mountains Experiment (OLYMPEX)

    Energy Technology Data Exchange (ETDEWEB)

    Houze, Robert A. [University of Washington, Seattle, Washington; Pacific Northwest National Laboratory, Richland, Washington; McMurdie, Lynn A. [University of Washington, Seattle, Washington; Petersen, Walter A. [NASA Marshall Space Flight Center, Huntsville, Alabama; Schwaller, Mathew R. [NASA Goddard Space Flight Center, Greenbelt, Maryland; Baccus, William [Olympic National Park, Port Angeles, Washington; Lundquist, Jessica D. [University of Washington, Seattle, Washington; Mass, Clifford F. [University of Washington, Seattle, Washington; Nijssen, Bart [University of Washington, Seattle, Washington; Rutledge, Steven A. [Colorado State University, Fort Collins, Colorado; Hudak, David R. [Environment and Climate Change Canada, King City, Ontario, Canada; Tanelli, Simone [Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California; Mace, Gerald G. [University of Utah, Salt Lake City, Utah; Poellot, Michael R. [University of North Dakota, Grand Forks, North Dakota; Lettenmaier, Dennis P. [University of California, Los Angeles, Los Angeles, California; Zagrodnik, Joseph P. [University of Washington, Seattle, Washington; Rowe, Angela K. [University of Washington, Seattle, Washington; DeHart, Jennifer C. [University of Washington, Seattle, Washington; Madaus, Luke E. [National Center for Atmospheric Research, Boulder, Colorado; Barnes, Hannah C. [Pacific Northwest National Laboratory, Richland, Washington

    2017-10-01

    the Olympic Mountains Experiment (OLYMPEX) took place during the 2015-2016 fall-winter season in the vicinity of the mountainous Olympic Peninsula of Washington State. The goals of OLYMPEX were to provide physical and hydrologic ground validation for the U.S./Japan Global Precipitation Measurement (GPM) satellite mission and, more specifically, to study how precipitation in Pacific frontal systems is modified by passage over coastal mountains. Four transportable scanning dual-polarization Doppler radars of various wavelengths were installed. Surface stations were placed at various altitudes to measure precipitation rates, particle size distributions, and fall velocities. Autonomous recording cameras monitored and recorded snow accumulation. Four research aircraft supplied by NASA investigated precipitation processes and snow cover, and supplemental rawinsondes and dropsondes were deployed during precipitation events. Numerous Pacific frontal systems were sampled, including several reaching "atmospheric river" status, warm and cold frontal systems, and postfrontal convection

  15. Yucca Mountain project prototype testing

    International Nuclear Information System (INIS)

    Hughes, W.T.; Girdley, W.A.

    1990-01-01

    The U.S. DOE is responsible for characterizing the Yucca Mountain site in Nevada to determine its suitability for development as a geologic repository to isolate high-level nuclear waste for at least 10,000 years. This unprecedented task relies in part on measurements made with relatively new methods or applications, such as dry coring and overcoring for studies to be conducted from the land surface and in an underground facility. The Yucca Mountain Project has, since 1988, implemented a program of equipment development and methods development for a broad spectrum of hydrologic, geologic, rock mechanics, and thermomechanical tests planned for use in an Exploratory Shaft during site characterization at the Yucca Mountain site. A second major program was fielded beginning in April 1989 to develop and test methods and equipment for surface drilling to obtain core samples from depth using only air as a circulating medium. The third major area of prototype testing has been during the ongoing development of the Instrumentation/ Data Acquisition System (IDAS), designed to collect and monitor data from down-hole instrumentation in the unsaturated zone, and store and transmit the data to a central archiving computer. Future prototype work is planned for several programs including the application of vertical seismic profiling methods and flume design to characterizing the geology at Yucca Mountain. The major objectives of this prototype testing are to assure that planned Site Characterization testing can be carried out effectively at Yucca Mountain, both in the Exploratory Shaft Facility (ESF), and from the surface, and to avoid potential major failures or delays that could result from the need to re-design testing concepts or equipment. This paper will describe the scope of the Yucca Mountain Project prototype testing programs and summarize results to date. 3 figs

  16. Mountain Warfare: The Need for Specialist Training

    National Research Council Canada - National Science Library

    Malik, Muhammad

    2003-01-01

    This study focuses on the need for specialist training for mountain warfare. It analyzes the special characteristics of mountain and high altitude terrain which affect conduct of military operations...

  17. A mountain of millipedes I

    DEFF Research Database (Denmark)

    Enghoff, Henrik

    2014-01-01

    Twenty new species of the millipede genus Chaleponcus Attems, 1914, are described from the Udzungwa Mountains: C. netus sp. nov., C. quasimodo sp. nov., C. malleolus sp. nov., C. scopus sp. nov., C. nikolajscharffi sp. nov., C. mwanihanensis sp. nov., C. basiliscus sp. nov., C. krai sp. nov., C...

  18. Soil variability in mountain areas

    OpenAIRE

    Zanini, E.; Freppaz, M.; Stanchi, S.; Bonifacio, E.; Egli, M.

    2015-01-01

    The high spatial variability of soils is a relevant issue at local and global scales, and determines the complexity of soil ecosystem functions and services. This variability derives from strong dependencies of soil ecosystems on parent materials, climate, relief and biosphere, including human impact. Although present in all environments, the interactions of soils with these forming factors are particularly striking in mountain areas.

  19. The Mountaineer-Malaysia Connection.

    Science.gov (United States)

    Young, Jeff

    1997-01-01

    A 26-day summer field course of West Virginia University's (WVU) Recreation and Parks Department took students to Malaysia's mountains and rainforests to observe how Malaysians are managing national parks, problem elephants, and population pressures on parks. The adventure provided powerful learning experiences. Further exchanges between WVU and…

  20. A mountain of millipedes V

    DEFF Research Database (Denmark)

    Enghoff, Henrik

    2016-01-01

    Three new genera of Odontopygidae are described, all based on new species from the Udzungwa mountains, Tanzania, and all monotypic: Casuariverpa gen. nov. (type species: C. scarpa gen. et sp. nov.), Yia gen. nov. (type species: Y. geminispina gen. et sp. nov.), and Utiliverpa gen. nov. (type spec...

  1. Mountain biking injuries: an update.

    Science.gov (United States)

    Kronisch, Robert L; Pfeiffer, Ronald P

    2002-01-01

    This article reviews the available literature regarding injuries in off-road bicyclists. Recent progress in injury research has allowed the description of several patterns of injury in this sport. Mountain biking remains popular, particularly among young males, although sales and participation figures have decreased in the last several years. Competition in downhill racing has increased, while cross-country racing has decreased somewhat in popularity. Recreational riders comprise the largest segment of participants, but little is known about the demographics and injury epidemiology of noncompetitive mountain cyclists. Most mountain bikers participating in surveys reported a history of previous injuries, but prospective studies conducted at mountain bike races have found injury rates of bike racing the risk of injury may be higher for women than men. Minor injuries such as abrasions and contusions occur frequently, but are usually of little consequence. Fractures usually involve the torso or upper extremities, and shoulder injuries are common. Head and face injuries are not always prevented by current helmet designs. Fatal injuries are rare but have been reported. Improvements in safety equipment, rider training and racecourse design are suggested injury prevention measures. The authors encourage continued research in this sport.

  2. Gearing Up for Mountain Biking.

    Science.gov (United States)

    Jahnke, Thomas; Hamson, Mike

    1999-01-01

    Examines the gear system of a mountain bike to discover any redundancy in the many gear settings available to the cyclist. Suggests a best strategy for changing up through the gears on a typical 21-gear system and an adjustment to the available gears that would result in a smoother change. (Author/ASK)

  3. A mountain of millipedes III

    DEFF Research Database (Denmark)

    Enghoff, Henrik

    2016-01-01

    The new genus Geotypodon gen. nov. is described. It includes two species from the Udzungwa Mountains: G. millemanus gen. et sp. nov. (type species) and G. submontanus gen. et sp. nov., one species from nearby Iringa: G. iringensis gen. et sp. nov., and 18 previously described species hitherto...

  4. Rocky Mountain spotted fever, Panama.

    Science.gov (United States)

    Estripeaut, Dora; Aramburú, María Gabriela; Sáez-Llorens, Xavier; Thompson, Herbert A; Dasch, Gregory A; Paddock, Christopher D; Zaki, Sherif; Eremeeva, Marina E

    2007-11-01

    We describe a fatal pediatric case of Rocky Mountain spotted fever in Panama, the first, to our knowledge, since the 1950s. Diagnosis was established by immunohistochemistry, PCR, and isolation of Rickettsia rickettsii from postmortem tissues. Molecular typing demonstrated strong relatedness of the isolate to strains of R. rickettsii from Central and South America.

  5. Rocky Mountain spotted fever, Colombia.

    Science.gov (United States)

    Hidalgo, Marylin; Orejuela, Leonora; Fuya, Patricia; Carrillo, Pilar; Hernandez, Jorge; Parra, Edgar; Keng, Colette; Small, Melissa; Olano, Juan P; Bouyer, Donald; Castaneda, Elizabeth; Walker, David; Valbuena, Gustavo

    2007-07-01

    We investigated 2 fatal cases of Rocky Mountain spotted fever that occurred in 2003 and 2004 near the same locality in Colombia where the disease was first reported in the 1930s. A retrospective serosurvey of febrile patients showed that > 21% of the serum samples had antibodies aaainst spotted fever group rickettsiae.

  6. Evolution of microbial pathogens

    National Research Council Canada - National Science Library

    DiRita, Victor J; Seifert, H. Steven

    2006-01-01

    ... A. Hogan vvi ■ CONTENTS 8. Evolution of Pathogens in Soil Rachel Muir and Man-Wah Tan / 131 9. Experimental Models of Symbiotic Host-Microbial Relationships: Understanding the Underpinnings of ...

  7. Synthetic Electric Microbial Biosensors

    Science.gov (United States)

    2017-06-10

    domains and DNA-binding domains into a single protein for deregulation of down stream genes of have been favored [10]. Initially experiments with... Germany DISTRIBUTION A. Approved for public release: distribution unlimited.   Talk title: “Synthetic biology based microbial biosensors for the...toolbox” in Heidelberg, Germany Poster title: “Anaerobic whole cell microbial biosensors” Link: http://phdsymposium.embl.org/#home   September, 2014

  8. Microbial diversity in European alpine permafrost and active layers.

    Science.gov (United States)

    Frey, Beat; Rime, Thomas; Phillips, Marcia; Stierli, Beat; Hajdas, Irka; Widmer, Franco; Hartmann, Martin

    2016-03-01

    Permafrost represents a largely understudied genetic resource. Thawing of permafrost with global warming will not only promote microbial carbon turnover with direct feedback on greenhouse gases, but also unlock an unknown microbial diversity. Pioneering metagenomic efforts have shed light on the permafrost microbiome in polar regions, but temperate mountain permafrost is largely understudied. We applied a unique experimental design coupled to high-throughput sequencing of ribosomal markers to characterize the microbiota at the long-term alpine permafrost study site 'Muot-da-Barba-Peider' in eastern Switzerland with an approximate radiocarbon age of 12 000 years. Compared to the active layers, the permafrost community was more diverse and enriched with members of the superphylum Patescibacteria (OD1, TM7, GN02 and OP11). These understudied phyla with no cultured representatives proposedly feature small streamlined genomes with reduced metabolic capabilities, adaptations to anaerobic fermentative metabolisms and potential ectosymbiotic lifestyles. The permafrost microbiota was also enriched with yeasts and lichenized fungi known to harbour various structural and functional adaptation mechanisms to survive under extreme sub-zero conditions. These data yield an unprecedented view on microbial life in temperate mountain permafrost, which is increasingly important for understanding the biological dynamics of permafrost in order to anticipate potential ecological trajectories in a warming world. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  9. Microbial bioinformatics 2020.

    Science.gov (United States)

    Pallen, Mark J

    2016-09-01

    Microbial bioinformatics in 2020 will remain a vibrant, creative discipline, adding value to the ever-growing flood of new sequence data, while embracing novel technologies and fresh approaches. Databases and search strategies will struggle to cope and manual curation will not be sustainable during the scale-up to the million-microbial-genome era. Microbial taxonomy will have to adapt to a situation in which most microorganisms are discovered and characterised through the analysis of sequences. Genome sequencing will become a routine approach in clinical and research laboratories, with fresh demands for interpretable user-friendly outputs. The "internet of things" will penetrate healthcare systems, so that even a piece of hospital plumbing might have its own IP address that can be integrated with pathogen genome sequences. Microbiome mania will continue, but the tide will turn from molecular barcoding towards metagenomics. Crowd-sourced analyses will collide with cloud computing, but eternal vigilance will be the price of preventing the misinterpretation and overselling of microbial sequence data. Output from hand-held sequencers will be analysed on mobile devices. Open-source training materials will address the need for the development of a skilled labour force. As we boldly go into the third decade of the twenty-first century, microbial sequence space will remain the final frontier! © 2016 The Author. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

  10. Spiders in mountain habitats of the Giant Mountains

    Czech Academy of Sciences Publication Activity Database

    Růžička, Vlastimil; Vaněk, J.; Šmilauer, P.

    2012-01-01

    Roč. 43, č. 4 (2012), s. 341-347 ISSN 1067-4136 Institutional research plan: CEZ:AV0Z50070508 Keywords : Giant Mountains (Krkonoše, Karkonosze) * spider s * anemo-orographic systems Subject RIV: EH - Ecology, Behaviour Impact factor: 0.236, year: 2012 http://www.springerlink.com/content/0k5g721q1155r146/fulltext.pdf

  11. Deep subsurface microbial processes

    Science.gov (United States)

    Lovley, D.R.; Chapelle, F.H.

    1995-01-01

    Information on the microbiology of the deep subsurface is necessary in order to understand the factors controlling the rate and extent of the microbially catalyzed redox reactions that influence the geophysical properties of these environments. Furthermore, there is an increasing threat that deep aquifers, an important drinking water resource, may be contaminated by man's activities, and there is a need to predict the extent to which microbial activity may remediate such contamination. Metabolically active microorganisms can be recovered from a diversity of deep subsurface environments. The available evidence suggests that these microorganisms are responsible for catalyzing the oxidation of organic matter coupled to a variety of electron acceptors just as microorganisms do in surface sediments, but at much slower rates. The technical difficulties in aseptically sampling deep subsurface sediments and the fact that microbial processes in laboratory incubations of deep subsurface material often do not mimic in situ processes frequently necessitate that microbial activity in the deep subsurface be inferred through nonmicrobiological analyses of ground water. These approaches include measurements of dissolved H2, which can predict the predominant microbially catalyzed redox reactions in aquifers, as well as geochemical and groundwater flow modeling, which can be used to estimate the rates of microbial processes. Microorganisms recovered from the deep subsurface have the potential to affect the fate of toxic organics and inorganic contaminants in groundwater. Microbial activity also greatly influences 1 the chemistry of many pristine groundwaters and contributes to such phenomena as porosity development in carbonate aquifers, accumulation of undesirably high concentrations of dissolved iron, and production of methane and hydrogen sulfide. Although the last decade has seen a dramatic increase in interest in deep subsurface microbiology, in comparison with the study of

  12. Analyses of soil microbial community compositions and functional genes reveal potential consequences of natural forest succession.

    Science.gov (United States)

    Cong, Jing; Yang, Yunfeng; Liu, Xueduan; Lu, Hui; Liu, Xiao; Zhou, Jizhong; Li, Diqiang; Yin, Huaqun; Ding, Junjun; Zhang, Yuguang

    2015-05-06

    The succession of microbial community structure and function is a central ecological topic, as microbes drive the Earth's biogeochemical cycles. To elucidate the response and mechanistic underpinnings of soil microbial community structure and metabolic potential relevant to natural forest succession, we compared soil microbial communities from three adjacent natural forests: a coniferous forest (CF), a mixed broadleaf forest (MBF) and a deciduous broadleaf forest (DBF) on Shennongjia Mountain in central China. In contrary to plant communities, the microbial taxonomic diversity of the DBF was significantly (P the DBF. Furthermore, a network analysis of microbial carbon and nitrogen cycling genes showed the network for the DBF samples was relatively large and tight, revealing strong couplings between microbes. Soil temperature, reflective of climate regimes, was important in shaping microbial communities at both taxonomic and functional gene levels. As a first glimpse of both the taxonomic and functional compositions of soil microbial communities, our results suggest that microbial community structure and function potentials will be altered by future environmental changes, which have implications for forest succession.

  13. Microbial conversion technologies

    Energy Technology Data Exchange (ETDEWEB)

    Lau, P. [National Research Council of Canada, Ottawa, ON (Canada). Bioconversion and Sustainable Development

    2006-07-01

    Microbes are a biomass and an valuable resource. This presentation discussed microbial conversion technologies along with background information on microbial cells, their characteristics and microbial diversity. Untapped opportunities for microbial conversion were identified. Metagenomic and genome mining approaches were also discussed, as they can provide access to uncultivated or unculturable microorganisms in communal populations and are an unlimited resource for biocatalysts, novel genes and metabolites. Genome mining was seen as an economical approach. The presentation also emphasized that the development of microbial biorefineries would require significant insights into the relevant microorganisms and that biocatalysts were the ultimate in sustainability. In addition, the presentation discussed the natural fibres initiative for biochemicals and biomaterials. Anticipated outputs were identified and work in progress of a new enzyme-retting cocktail to provide diversity and/or consistency in fibre characteristics for various applications were also presented. It was concluded that it is necessary to leverage understanding of biological processes to produce bioproducts in a clean and sustainable manner. tabs., figs.

  14. Managing Rocky Mountain spotted fever.

    Science.gov (United States)

    Minniear, Timothy D; Buckingham, Steven C

    2009-11-01

    Rocky Mountain spotted fever is caused by the tick-borne bacterium Rickettsia rickettsii. Symptoms range from moderate illness to severe illness, including cardiovascular compromise, coma and death. The disease is prevalent in most of the USA, especially during warmer months. The trademark presentation is fever and rash with a history of tick bite, although tick exposure is unappreciated in over a third of cases. Other signature symptoms include headache and abdominal pain. The antibiotic therapy of choice for R. rickettsii infection is doxycycline. Preventive measures for Rocky Mountain spotted fever and other tick-borne diseases include: wearing long-sleeved, light colored clothing; checking for tick attachment and removing attached ticks promptly; applying topical insect repellent; and treating clothing with permethrin.

  15. The physiology of mountain biking.

    Science.gov (United States)

    Impellizzeri, Franco M; Marcora, Samuele M

    2007-01-01

    Mountain biking is a popular outdoor recreational activity and an Olympic sport. Cross-country circuit races have a winning time of approximately equal 120 minutes and are performed at an average heart rate close to 90% of the maximum, corresponding to 84% of maximum oxygen uptake (VO2max). More than 80% of race time is spent above the lactate threshold. This very high exercise intensity is related to the fast starting phase of the race; the several climbs, forcing off-road cyclists to expend most of their effort going against gravity; greater rolling resistance; and the isometric contractions of arm and leg muscles necessary for bike handling and stabilisation. Because of the high power output (up to 500W) required during steep climbing and at the start of the race, anaerobic energy metabolism is also likely to be a factor of off-road cycling and deserves further investigation. Mountain bikers' physiological characteristics indicate that aerobic power (VO2max >70 mL/kg/min) and the ability to sustain high work rates for prolonged periods of time are prerequisites for competing at a high level in off-road cycling events. The anthropometric characteristics of mountain bikers are similar to climbers and all-terrain road cyclists. Various parameters of aerobic fitness are correlated to cross-country performance, suggesting that these tests are valid for the physiological assessment of competitive mountain bikers, especially when normalised to body mass. Factors other than aerobic power and capacity might influence off-road cycling performance and require further investigation. These include off-road cycling economy, anaerobic power and capacity, technical ability and pre-exercise nutritional strategies.

  16. Mountain Plant Community Sentinels: AWOL

    Science.gov (United States)

    Malanson, G. P.

    2017-12-01

    Mountain plant communities are thought to be sensitive to climate change. Because climatic gradients are steep on mountain slopes, the spatial response of plant communities to climate change should be compressed and easier to detect. These expectations have led to identifying mountain plant communities as sentinels for climate change. This idea has, however, been criticized. Two critiques, for alpine treeline and alpine tundra, are rehearsed and supplemented. The critique of alpine treeline as sentinel is bolstered with new model results on the confounding role of dispersal mechanisms and sensitivity to climatic volatility. In alpine tundra, for which background turnover rates have yet to be established, community composition may reflect environmental gradients only for extremes where effects of climate are most indirect. Both plant communities, while primarily determined by energy at broad scales, may respond to water as a proximate driver at local scales. These plant communities may not be in equilibrium with climate, and differently scaled time lags may mean that ongoing vegetation change may not signal ongoing climate change (or lack thereof). In both cases a double-whammy is created by scale dependence for time lags and for drivers leading to confusion, but these cases present opportunities for insights into basic ecology.

  17. Autotrophic and heterotrophic bacterial diversity from Yucca Mountain

    International Nuclear Information System (INIS)

    Khalil, M.; Haldeman, D.L.; Igbinovia, A.; Castro, P.

    1996-01-01

    A basic understanding of the types and functions of microbiota present within the deep subsurface of Yucca Mountain will be important in terms of modeling the long term stability of a nuclear waste repository. Microorganisms can degrade building materials used in tunnel construction such as concrete and steel. For example, high concentrations of nitrifying bacteria, may cause corrosion of concrete due to the release of nitric acid. Likewise, sulfur-oxidizing and iron-oxidizing bacteria have been implicated in microbially influenced corrosion (MIC), and may contribute to the degradation of waste packages. In addition, the metabolic activities of microbiota may alter the geochemistry of surrounding environments, which may in turn influence the permeability of subsurface strata and the fate of radioactive compounds. Microorganisms that play roles in these processes have diverse methods of obtaining the energy required for growth and metabolism and have been recovered from a wide range of environments, including the deep subsurface. The purpose of this research was to determine if these bacterial groups, important to the long-term success of a high-level nuclear waste repository, were indigenous to Yucca Mountain

  18. EVA Suit Microbial Leakage Investigation

    Data.gov (United States)

    National Aeronautics and Space Administration — The objective of this project is to collect microbial samples from various EVA suits to determine how much microbial contamination is typically released during...

  19. Mountain Weather and Climate, Third Edition

    Science.gov (United States)

    Hastenrath, Stefan

    2009-05-01

    For colleagues with diverse interests in the atmosphere, glaciers, radiation, landforms, water resources, vegetation, human implications, and more, Mountain Weather and Climate can be a valuable source of guidance and literature references. The book is organized into seven chapters: 1, Mountains and their climatological study; 2,Geographical controls of mountain meteorological elements; 3, Circulation systems related to orography; 4, Climatic characteristics of mountains; 5, Regional case studies; 6, Mountain bioclimatology; and 7, Changes in mountain climates. These chapters are supported by l78 diagrams and photographs, 47 tables, and some 2000 literature references. The volume has an appendix of units and energy conversion factors and a subject index, but it lacks an author index.

  20. The quantitative soil quality assessment tobacco plant in Sindoro mountainous zone

    Directory of Open Access Journals (Sweden)

    Supriyadi

    2014-04-01

    Full Text Available The long-term cultivation of tobacco (Nicotiana tabacum plant in the Sindoro mountainous zone of Central Java has resulted in soil quality degradation that could affect economic development in the region if sustainable production practices are not identified. The objective of the study was to identify appropriate indicators for assessing soil quality on tobacco plant. The quantitative soil quality indicators were total organic-C, pH, available P and available K (chemical, soil depth, bulk density, AWC (available water capacity and soil aggregate stability (physical, and qCO2 (soil respiration, MBC (microbial biomass carbon (biological. The decreases in the soil aggregate stability, available water capacity, cation exchange capacity, soil respiration, microbial biomass carbon and total organic-C; or increases in bulk density (compaction, available P, available K and total nitrogen indicated the decrease in soil quality due to long-term tobacco production. The result of this research showed that the change of soil quality had occurred in Sindoro Mountain. The Soil Quality Index (SQI for three land use systems in Sindoro mountain (forest, mixed farm, and tobacco were 0.60, 0.47, and 0.57, respectively. The comparison of these rates with soil quality classes showed that the soil quality presented moderate to good level of quality; class SQI.

  1. Molecular ecology of microbial mats

    NARCIS (Netherlands)

    Bolhuis, H.; Cretoiu, M.S.; Stal, L.J.

    2014-01-01

    Phototrophic microbial mats are ideal model systems for ecological and evolutionary analysis of highly diverse microbial communities. Microbial mats are small-scale, nearly closed, and self-sustaining benthic ecosystems that comprise the major element cycles, trophic levels, and food webs. The steep

  2. Anaerobic microbial dehalogenation

    NARCIS (Netherlands)

    Smidt, H.; Vos, de W.M.

    2004-01-01

    The natural production and anthropogenic release of halogenated hydrocarbons into the environment has been the likely driving force for the evolution of an unexpectedly high microbial capacity to dehalogenate different classes of xenobiotic haloorganics. This contribution provides an update on the

  3. Diazotrophic microbial mats

    NARCIS (Netherlands)

    Severin, I.; Stal, L.J.; Seckbach, J.; Oren, A.

    2010-01-01

    Microbial mats have been the focus of scientific research for a few decades. These small-scale ecosystems are examples of versatile benthic communities of microorganisms, usually dominated by phototrophic bacteria (e.g., Krumbein et al., 1977; Jørgensen et al., 1983). They develop as vertically

  4. Microbial Energy Conversion

    Energy Technology Data Exchange (ETDEWEB)

    Buckley, Merry [American Society for Microbiology (ASM), Washington, DC (United States); Wall, Judy D. [Univ. of Missouri, Columbia, MO (United States)

    2006-10-01

    The American Academy of Microbiology convened a colloquium March 10-12, 2006, in San Francisco, California, to discuss the production of energy fuels by microbial conversions. The status of research into various microbial energy technologies, the advantages and disadvantages of each of these approaches, research needs in the field, and education and training issues were examined, with the goal of identifying routes for producing biofuels that would both decrease the need for fossil fuels and reduce greenhouse gas emissions. Currently, the choices for providing energy are limited. Policy makers and the research community must begin to pursue a broader array of potential energy technologies. A diverse energy portfolio that includes an assortment of microbial energy choices will allow communities and consumers to select the best energy solution for their own particular needs. Funding agencies and governments alike need to prepare for future energy needs by investing both in the microbial energy technologies that work today and in the untested technologies that will serve the world’s needs tomorrow. More mature bioprocesses, such as ethanol production from starchy materials and methane from waste digestors, will find applications in the short term. However, innovative techniques for liquid fuel or biohydrogen production are among the longer term possibilities that should also be vigorously explored, starting now. Microorganisms can help meet human energy needs in any of a number of ways. In their most obvious role in energy conversion, microorganisms can generate fuels, including ethanol, hydrogen, methane, lipids, and butanol, which can be burned to produce energy. Alternatively, bacteria can be put to use in microbial fuel cells, where they carry out the direct conversion of biomass into electricity. Microorganisms may also be used some day to make oil and natural gas technologies more efficient by sequestering carbon or by assisting in the recovery of oil and

  5. Microbial electrosynthesis of biochemicals

    NARCIS (Netherlands)

    Bajracharya, S.

    2016-01-01

    Microbial electrosynthesis (MES) is an electricity-driven production of chemicals from low-value waste using microorganisms as biocatalysts. MES from CO2 comprises conversion of CO2 to multi-carbon compounds employing microbes at the cathode which use electricity as an energy source. This thesis

  6. OS X Mountain Lion bible

    CERN Document Server

    Gruman, Galen

    2012-01-01

    The complete guide to Mac OS X, fully updated for the newest release! The Mac's solid, powerful operating system and the exploding popularity of iOS devices are fueling a strong increase in market share for Apple. Previous editions of this book have sold more than 75,000 copies, and this new edition is fully updated with all the exciting features of OS X Mountain Lion, including Game Center, Messages, and Notifications. Written by industry expert Galen Gruman, it covers all the basics and then delves deep into professional and higher-end topics, making it the one book you need to succeed with

  7. Seaside, mountain and... wind turbines

    International Nuclear Information System (INIS)

    Gossement, A.

    2011-01-01

    Several courts have given a ruling considering that the law 'Montagne' (January 9., 1985) and the law 'Littoral' (January 3., 1986) are opposable to the building license of wind turbines. The law 'Littoral' imposes that any new construction in seaside areas has to be built in continuity of existing villages or hamlets. The law 'Montagne' imposes similar constraints to avoid the construction of isolated buildings in mountain areas but, contrary to the law 'Littoral', it allows some impairment for instance for the construction of certain public equipment. (A.C.)

  8. Yucca Mountain and The Environment

    International Nuclear Information System (INIS)

    NA

    2005-01-01

    The Yucca Mountain Project places a high priority on protecting the environment. To ensure compliance with all state and federal environmental laws and regulations, the Project established an Environmental Management System. Important elements of the Environmental Management System include the following: (1) monitoring air, water, and other natural resources; (2) protecting plant and animal species by minimizing land disturbance; (3) restoring vegetation and wildlife habitat in disturbed areas; (4) protecting cultural resources; (5) minimizing waste, preventing pollution, and promoting environmental awareness; and (6) managing of hazardous and non-hazardous waste. Reducing the impacts of Project activities on the environment will continue for the duration of the Project

  9. SANDIA MOUNTAIN WILDERNESS, NEW MEXICO.

    Science.gov (United States)

    Hedlund, D.C.; Kness, R.F.

    1984-01-01

    Geologic and mineral-resource investigations in the Sandia Mountains in New Mexico indicate that a small part of the area has a probable mineral-resource potential. Most of the mineral occurrences are small barite-fluorite veins that occur along faults on the eastern slope of the range. The barite veins in the Landsend area and in the Tunnel Spring area are classed as having a probable mineral-resource potential. Fluorite veins which occur at the La Luz mine contain silver-bearing galeana and the area near this mine is regarded as having a probable resource potential for silver. No energy resources were identified in this study.

  10. Protection of the Mountain Ridgelines Utilizing GIS

    Science.gov (United States)

    Lee, S.; Lee, M.

    2013-12-01

    Korean peninsula is characterized by numerous hills and mountains. The longest mountain ridgeline starting from Mt. Baekdusan to Mt. Jirisan is called Baekdudaegan which is similar to the continental divide or topographical watershed. In this study, GIS data, such as remotesensing images, national digital map, and watershed map, are used to analyze Korean mountain ridgelines structure and one Baekdudaegan data and nine Ridgelines are extracted. When extracted Baekdudaegan and other Ridgelines are overlaid on geologic maps, granite and gneiss are main components on the mountain ridgelines. The main mountain ridgelines are considered as the spiritual heritage overlapped in the land in Korea. As the environmental state is relatively better than those of other region in Korea, so many mountain ridgelines are legally protected by national legislation. The mountain ridgelines has hierarchical system; Baekdudaegan, Jeongmaek, Gimaek and Jimaek etc. according to their scale and total lengths of ridgelines. As only part of mountain ridgelines are currently protected by law or managed in environmental impact assessment (EIA) procedure, we think that most part of them should be under protection. Considering the environmental state of the ridgelines, we think that some protective measures should be set up nearby 1 km on both sides of them. If there goes a development plan or project near the main mountain ridgelines, topographical change index (TCI) and topographical scale index (TSI) etc. are to be applied in EIA. This study intends: firstly, to analyze the topological characteristics of the Korean mountain ridgelines using GIS, secondly, to analyze the geological characteristics of nearby mountain ridgelines, and lastly, to find a way to utilize the results on EIA.

  11. Maximum in the Middle: Nonlinear Response of Microbial Plankton to Ultraviolet Radiation and Phosphorus

    OpenAIRE

    Medina-S?nchez, Juan Manuel; Delgado-Molina, Jos? Antonio; Bratbak, Gunnar; Bullejos, Francisco Jos?; Villar-Argaiz, Manuel; Carrillo, Presentaci?n

    2013-01-01

    The responses of heterotrophic microbial food webs (HMFW) to the joint action of abiotic stressors related to global change have been studied in an oligotrophic high-mountain lake. A 2??5 factorial design field experiment performed with large mesocosms for >2 months was used to quantify the dynamics of the entire HMFW (bacteria, heterotrophic nanoflagellates, ciliates, and viruses) after an experimental P-enrichment gradient which approximated or surpassed current atmospheric P pulses in the ...

  12. Effects of Recurring Droughts on Extracellular Enzyme Activity in Mountain Grassland

    Science.gov (United States)

    Fuchslueger, L.; Bahn, M.; Kienzl, S.; Hofhansl, F.; Schnecker, J.; Richter, A.

    2015-12-01

    Water availability is a key factor for biogeochemical processes and determines microbial activity and functioning, and thereby organic matter decomposition in soils by affecting the osmotic potential, soil pore connectivity, substrate diffusion and nutrient availability. Low water availability during drought periods therefore directly affects microbial activity. Recurring drought periods likely induce shifts in microbial structure that might be reflected in altered responses of microbial turnover of organic matter by extracellular enzymes. To study this we measured a set of potential extracellular enzyme activity rates (cellobiohydrolase CBH; leucine-amino-peptidase LAP; phosphatase PHOS; phenoloxidase POX), in grassland soils that were exposed to extreme experimental droughts during the growing seasons of up to five subsequent years. During the first drought period after eight weeks of rain exclusion all measured potential enzyme activities were significantly decreased. In parallel, soil extractable organic carbon and nitrogen concentrations increased and microbial community structure, determined by phospholipid fatty acid analysis, changed. In soils that were exposed to two and three drought periods only PHOS decreased. After four years of drought again CBH, PHOS and POX decreased, while LAP was unaffected; after five years of drought PHOS and POX decreased and CBH and LAP remained stable. Thus, our results suggest that recurring extreme drought events can cause different responses of extracellular enzyme activities and that the responses change over time. We will discuss whether and to what degree these changes were related to shifts in microbial community composition. However, independent of whether a solitary or a recurrent drought was imposed, in cases when enzyme activity rates were altered during drought, they quickly recovered after rewetting. Overall, our data suggest that microbial functioning in mountain grassland is sensitive to drought, but highly

  13. Mountaineers

    OpenAIRE

    Thomson, John, 1837-1921, photographer

    2003-01-01

    89 x 110 mm. Woodburytype. A half-length portrait of a seated man from the village of Prodromos. The portrait appears in Thomson's 'Through Cyprus with the camera, in the autumn of 1878' (vol.2, London: Sampson Low, Marston, Searle, and Rivington, 1879). It is annotated: 'The villagers are a robust race, as may be gathered from the two following photographs, the first of which represents one of the chief people of the place, a man who deserves to be rendered famous for the kind manner in w...

  14. Mountaineers

    OpenAIRE

    Thomson, John, 1837-1921, photographer

    2003-01-01

    84 x 107 mm. Woodburytype. A posed portrait of a man from Prodromos. The portrait appears in Thomson's 'Through Cyprus with the camera, in the autumn of 1878' (vol.2, London: Sampson Low, Marston, Searle, and Rivington, 1879). It is annotated: 'Another Highlander figures in the second plate - a tall, bony man of a most obligingly good-natured disposition. He, however, looked a bold, determined character, whose massive hands and muscular frame would stand him in good stead in carrying out ...

  15. Rocky Mountain Research Station: 2011 Annual Accomplishments

    Science.gov (United States)

    Rick Fletcher

    2011-01-01

    The Rocky Mountain Research Station is one of seven regional units that make up the USDA Forest Service Research and Development organization ­ the most extensive natural resources research organization in the world. We maintain 12 field laboratories throughout a 12-state territory encompassing the Great Basin, Southwest, Rocky Mountains, and parts of the Great Plains...

  16. Rocky Mountain Research Station: 2010 Research Accomplishments

    Science.gov (United States)

    Rick Fletcher

    2010-01-01

    The Rocky Mountain Research Station is one of seven regional units that make up the USDA Forest Service Research and Development organization ­ the most extensive natural resources research organization in the world. We maintain 12 field laboratories throughout a 12-state territory encompassing the Great Basin, Southwest, Rocky Mountains, and parts of the Great Plains...

  17. Impact of Hypoxia on Man on Mountaineering

    Directory of Open Access Journals (Sweden)

    A. N. Kislitsyn

    2006-01-01

    Full Text Available External respiratory function was studied in those engaged in mountaineering. A negative correlation was found between the intensity of exercise and the changes in vital capacity under mountainous conditions. Changes occurring in the levels of glucose and cholesterol were considered in tourists.

  18. Rocky Mountain spotted fever in children.

    Science.gov (United States)

    Woods, Charles R

    2013-04-01

    Rocky Mountain spotted fever is typically undifferentiated from many other infections in the first few days of illness. Treatment should not be delayed pending confirmation of infection when Rocky Mountain spotted fever is suspected. Doxycycline is the drug of choice even for infants and children less than 8 years old. Copyright © 2013 Elsevier Inc. All rights reserved.

  19. Rocky Mountain Spotted Fever: Statistics and Epidemiology

    Science.gov (United States)

    ... Search Form Controls Cancel Submit Search the CDC Rocky Mountain Spotted Fever (RMSF) Note: Javascript is disabled or is not ... message, please visit this page: About CDC.gov . Rocky Mountain Spotted Fever (RMSF) Transmission Signs and Symptoms Diagnosis and Testing ...

  20. 78 FR 29366 - Green Mountain Power Corporation

    Science.gov (United States)

    2013-05-20

    ... DEPARTMENT OF ENERGY Federal Energy Regulatory Commission [Docket No. TS04-277-002] Green Mountain Power Corporation Notice of Filing Take notice that on May 2, 2013, Green Mountain Power Corporation filed additional information in support of its request for continued waiver of Standards of Conduct. Any...

  1. Rumen microbial genomics

    International Nuclear Information System (INIS)

    Morrison, M.; Nelson, K.E.

    2005-01-01

    Improving microbial degradation of plant cell wall polysaccharides remains one of the highest priority goals for all livestock enterprises, including the cattle herds and draught animals of developing countries. The North American Consortium for Genomics of Fibrolytic Ruminal Bacteria was created to promote the sequencing and comparative analysis of rumen microbial genomes, offering the potential to fully assess the genetic potential in a functional and comparative fashion. It has been found that the Fibrobacter succinogenes genome encodes many more endoglucanases and cellodextrinases than previously isolated, and several new processive endoglucanases have been identified by genome and proteomic analysis of Ruminococcus albus, in addition to a variety of strategies for its adhesion to fibre. The ramifications of acquiring genome sequence data for rumen microorganisms are profound, including the potential to elucidate and overcome the biochemical, ecological or physiological processes that are rate limiting for ruminal fibre degradation. (author)

  2. Microbial Genomes Multiply

    Science.gov (United States)

    Doolittle, Russell F.

    2002-01-01

    The publication of the first complete sequence of a bacterial genome in 1995 was a signal event, underscored by the fact that the article has been cited more than 2,100 times during the intervening seven years. It was a marvelous technical achievement, made possible by automatic DNA-sequencing machines. The feat is the more impressive in that complete genome sequencing has now been adopted in many different laboratories around the world. Four years ago in these columns I examined the situation after a dozen microbial genomes had been completed. Now, with upwards of 60 microbial genome sequences determined and twice that many in progress, it seems reasonable to assess just what is being learned. Are new concepts emerging about how cells work? Have there been practical benefits in the fields of medicine and agriculture? Is it feasible to determine the genomic sequence of every bacterial species on Earth? The answers to these questions maybe Yes, Perhaps, and No, respectively.

  3. Degradation of microbial polyesters.

    Science.gov (United States)

    Tokiwa, Yutaka; Calabia, Buenaventurada P

    2004-08-01

    Microbial polyhydroxyalkanoates (PHAs), one of the largest groups of thermoplastic polyesters are receiving much attention as biodegradable substitutes for non-degradable plastics. Poly(D-3-hydroxybutyrate) (PHB) is the most ubiquitous and most intensively studied PHA. Microorganisms degrading these polyesters are widely distributed in various environments. Although various PHB-degrading microorganisms and PHB depolymerases have been studied and characterized, there are still many groups of microorganisms and enzymes with varying properties awaiting various applications. Distributions of PHB-degrading microorganisms, factors affecting the biodegradability of PHB, and microbial and enzymatic degradation of PHB are discussed in this review. We also propose an application of a new isolated, thermophilic PHB-degrading microorganism, Streptomyces strain MG, for producing pure monomers of PHA and useful chemicals, including D-3-hydroxycarboxylic acids such as D-3-hydroxybutyric acid, by enzymatic degradation of PHB.

  4. Global Microbial Identifier

    DEFF Research Database (Denmark)

    Wielinga, Peter; Hendriksen, Rene S.; Aarestrup, Frank Møller

    2017-01-01

    ) will likely also enable a much better understanding of the pathogenesis of the infection and the molecular basis of the host response to infection. But the full potential of these advances will only transpire if the data in this area become transferable and thereby comparable, preferably in open-source...... of microorganisms, for the identification of relevant genes and for the comparison of genomes to detect outbreaks and emerging pathogens. To harness the full potential of WGS, a shared global database of genomes linked to relevant metadata and the necessary software tools needs to be generated, hence the global...... microbial identifier (GMI) initiative. This tool will ideally be used in amongst others in the diagnosis of infectious diseases in humans and animals, in the identification of microorganisms in food and environment, and to track and trace microbial agents in all arenas globally. This will require...

  5. A sightability model for mountain goats

    Science.gov (United States)

    Rice, C.G.; Jenkins, K.J.; Chang, W.-Y.

    2009-01-01

    Unbiased estimates of mountain goat (Oreamnos americanus) populations are key to meeting diverse harvest management and conservation objectives. We developed logistic regression models of factors influencing sightability of mountain goat groups during helicopter surveys throughout the Cascades and Olympic Ranges in western Washington during summers, 20042007. We conducted 205 trials of the ability of aerial survey crews to detect groups of mountain goats whose presence was known based on simultaneous direct observation from the ground (n 84), Global Positioning System (GPS) telemetry (n 115), or both (n 6). Aerial survey crews detected 77 and 79 of all groups known to be present based on ground observers and GPS collars, respectively. The best models indicated that sightability of mountain goat groups was a function of the number of mountain goats in a group, presence of terrain obstruction, and extent of overstory vegetation. Aerial counts of mountain goats within groups did not differ greatly from known group sizes, indicating that under-counting bias within detected groups of mountain goats was small. We applied HorvitzThompson-like sightability adjustments to 1,139 groups of mountain goats observed in the Cascade and Olympic ranges, Washington, USA, from 2004 to 2007. Estimated mean sightability of individual animals was 85 but ranged 0.750.91 in areas with low and high sightability, respectively. Simulations of mountain goat surveys indicated that precision of population estimates adjusted for sightability biases increased with population size and number of replicate surveys, providing general guidance for the design of future surveys. Because survey conditions, group sizes, and habitat occupied by goats vary among surveys, we recommend using sightability correction methods to decrease bias in population estimates from aerial surveys of mountain goats.

  6. Microbialites in the shallow-water marine environments of the Holy Cross Mountains (Poland) in the aftermath of the Frasnian-Famennian biotic crisis

    Science.gov (United States)

    Rakociński, Michał; Racki, Grzegorz

    2016-01-01

    Microbial carbonates, consisting of abundant girvanellid oncoids, are described from cephalopod-crinoid and crinoid-brachiopod coquinas (rudstones) occurring in the lowermost Famennian of the Holy Cross Mountains, Poland. A Girvanella-bearing horizon (consist with numerous girvanellid oncoids) has been recognised at the Psie Górki section, and represents the northern slope succession of the drowned Dyminy Reef. This occurrence of microbialites in the aftermath of the Frasnian-Famennian event is interpreted as the result of opportunistic cyanobacteria blooms, which, as 'disaster forms', colonised empty shallow-water ecological niches during the survival phase following the Frasnian metazoan reef collapse, due to collapsed activity of epifaunal, grazing, and/or burrowing animals. The anachronistic lithofacies at Psie Górki is linked with catastrophic mass mortality of the cephalopod and crinoid-brachiopod communities during the heavy storm events. This mass occurrence of girvanellid oncoids, along with Frutexites-like microbial shrubs and, at least partly, common micritisation of some skeletal grains, records an overall increase in microbial activity in eutrophic normal marine environments. Microbial communities in the Holy Cross Mountains are not very diverse, being mainly represented by girvanellid oncoids, and stand in contrast to the very rich microbial communities known from the Guilin area (China), Canning Basin (Australia) and the Timan-northern Ural area (Russia). The association from Poland is similar to more diverse microbial communities represented by oncoids, trombolites and stromatolites, well known from the Canadian Alberta basin.

  7. Soil monitoring in agro-ecosystems of high mountain zone in Quindio

    International Nuclear Information System (INIS)

    Sadeghian, Siavosh; Orozco, O l; Murgueitio, E

    2001-01-01

    Were evaluated soil characteristics in 4 common agro-ecosystems of high mountain zone of Quindio department, soil forest exhibit better indicators that others systems. Low macro porosity and hydraulic conductivity were consequences more important of cattle ranching systems. In pinus plantations were registered lower value of organic matter, pH, interchanging bases, gravimetric moisture and microbial activity CO 2 . As a result of pinus establishment on pasture ground increase drainable porosity and hydraulic conductivity. In granadilla cultivation were lower organism diversity and structural stability

  8. Assessing microbiologically induced corrosion of waste package materials in the Yucca Mountain repository

    Energy Technology Data Exchange (ETDEWEB)

    Horn, J. M., LLNL

    1998-01-01

    The contribution of bacterial activities to corrosion of nuclear waste package materials must be determined to predict the adequacy of containment for a potential nuclear waste repository at Yucca Mountain (YM), NV. The program to evaluate potential microbially induced corrosion (MIC) of candidate waste container materials includes characterization of bacteria in the post-construction YM environment, determination of their required growth conditions and growth rates, quantitative assessment of the biochemical contribution to metal corrosion, and evaluation of overall MIC rates on candidate waste package materials.

  9. Synthetic microbial ecology and the dynamic interplay between microbial genotypes.

    Science.gov (United States)

    Dolinšek, Jan; Goldschmidt, Felix; Johnson, David R

    2016-11-01

    Assemblages of microbial genotypes growing together can display surprisingly complex and unexpected dynamics and result in community-level functions and behaviors that are not readily expected from analyzing each genotype in isolation. This complexity has, at least in part, inspired a discipline of synthetic microbial ecology. Synthetic microbial ecology focuses on designing, building and analyzing the dynamic behavior of ‘ecological circuits’ (i.e. a set of interacting microbial genotypes) and understanding how community-level properties emerge as a consequence of those interactions. In this review, we discuss typical objectives of synthetic microbial ecology and the main advantages and rationales of using synthetic microbial assemblages. We then summarize recent findings of current synthetic microbial ecology investigations. In particular, we focus on the causes and consequences of the interplay between different microbial genotypes and illustrate how simple interactions can create complex dynamics and promote unexpected community-level properties. We finally propose that distinguishing between active and passive interactions and accounting for the pervasiveness of competition can improve existing frameworks for designing and predicting the dynamics of microbial assemblages.

  10. AHP 21: Review: Moving Mountains

    Directory of Open Access Journals (Sweden)

    William B. Noseworthy

    2012-12-01

    Full Text Available Moving Mountains stands out among recent discussions of the Southeast Asian Highlands, drawing from twelve contributors with extensive field experience living and working in locales closed to nonCommunist academics between 1945 and 1990 (3. The authors' methodologies focus on the anthropological approach of participant observation combined with oral history. Previously, substantial research had been confined to the experience of "hill tribes" in Northern Thailand (11, unless one gained access to the massive collections of French language research under the École Française d'Extrême Orient (EFEO or the Société Asiatique (SA, both in Paris. As such, this volume's contributors are able to ring out the voices of Southeast Asian Massif populations in a way that demonstrates a mindful assembly of research, while carefully narrating a more complex view of the region than that presented by Scott's (2009:22 "zones of refuge." ...

  11. Natural analogs for Yucca Mountain

    International Nuclear Information System (INIS)

    Murphy, W.M.

    1995-01-01

    High-level radioactive waste in the US, spent fuels from commercial reactors and nuclear materials generated by defense activities, will remain potentially hazardous for thousands of years. Demonstrable long-term stability of certain geologic and geochemical systems motivates and sustains the concept that high-level waste can be safely isolated in geologic repositories for requisite periods of time. Each geologic repository is unique in its properties and performance with reguard to isolation of nuclear wastes. Studies of processes analogous to waste-form alteration and radioelement transport in environments analogous to Yucca Mountain are being conducted at two sites, described in this article to illustrate uses of natural analog data: the Nopal I uranium deposit in the Sierra Pena Blanca, Mexico, and the Akrotiri archaeological site on the island of Santorini, Greece

  12. Occupational Health in Mountainous Kyrgyzstan.

    Science.gov (United States)

    Dzhusupov, Kenesh O; Colosio, Claudio; Tabibi, Ramin; Sulaimanova, Cholpon T

    2015-01-01

    In the period of transition from a centralized economy to the market economy, occupational health services in Kyrgyzstan have survived through dramatic, detrimental changes. It is common for occupational health regulations to be ignored and for basic occupational health services across many industrial enterprises and farms to be neglected. The aim of this study was to demonstrate the present situation and challenges facing occupational health services in Kyrgyzstan. The transition from centralized to the market economy in Kyrgyzstan has led to increased layoffs of workers and unemployment. These threats are followed by increased workload, and the health and safety of workers becomes of little concern. Private employers ignore occupational health and safety; consequently, there is under-reporting of occupational diseases and accidents. The majority of enterprises, especially those of small or medium size, are unsanitary, and the health status of workers remains largely unknown. The low official rates of occupational diseases are the result of data being deliberately hidden; lack of coverage of working personnel by medical checkups; incompetent management; and the poor quality of staff, facilities, and equipment. Because Kyrgyzstan is a mountainous country, the main environmental and occupational factor of enterprises is hypoxia. Occupational health specialists have greatly contributed to the development of occupational medicine in the mountains through science and practice. The enforcement of existing strong occupational health legislation and increased financing of occupational health services are needed. The maintenance of credible health monitoring and effective health services for workers, re-establishment of medical services and sanitary-hygienic laboratories in industrial enterprises, and support for scientific investigations on occupational risk assessment will increase the role of occupational health services in improving the health of the working population

  13. Groundwater contamination and the relationship between water chemistry and biotic components in a karst system (Bihor Mountains, Romania

    Directory of Open Access Journals (Sweden)

    Laura Epure

    2014-12-01

    Full Text Available The physical and chemical characteristics, microbial contaminat ion, and meiofauna of the Ocoale-Gheţar-Dobreşti karst system (Bihor Mountains, Romania were studied in order to assess the natural water quality by an interdisciplinary study. A total of 60 water samples were collected seasonally from 7 sites. Physico-chemical results showed a typical composition of karst waters, except for one site, where Ca2+ was absent, pH was very low, and the abundance and diversity of meiofauna were highest, demonstrating life support even for the most sensitive animals. No significant chemical pollution was found, but microbial contamination occurred in all samples, according to the national water quality standards of the analyzed springs. The Canonical Correlation Analysis and the Canonical Correspondence Analysis performed showed a strong connection between pH, nitrates and faecal pollution, indicating also a direct connection between microbial contaminants and dissolved oxygen.

  14. Microbial Cell Dynamics Lab (MCDL)

    Data.gov (United States)

    Federal Laboratory Consortium — The Microbial Cell Dynamics Laboratory at PNNL enables scientists to study the molecular details of microbes under relevant environmental conditions. The MCDL seeks...

  15. Mountain laurel toxicosis in a dog.

    Science.gov (United States)

    Manhart, Ingrid O; DeClementi, Camille; Guenther, Christine L

    2013-01-01

    To describe a case of mountain laurel (Kalmia latifolia) toxicosis in a dog, including case management and successful outcome. A dog presented for vomiting, hematochezia, bradycardia, weakness, and ataxia, which did not improve with supportive treatment. Mountain laurel ingestion was identified as cause of clinical signs after gastrotomy was performed to remove stomach contents. Supportive treatment was continued and the dog made a full recovery. This report details a case of mountain laurel toxicosis in a dog, including management strategies and outcome, which has not been previously published in the veterinary literature. © Veterinary Emergency and Critical Care Society 2013.

  16. Transport of neptunium through Yucca Mountain tuffs

    International Nuclear Information System (INIS)

    Triay, I.R.; Robinson, B.A.; Mitchell, A.J.; Overly, C.M.; Lopez, R.M.

    1993-01-01

    Neptunium has a high solubility in groundwaters from Yucca Mountain [1]. Uranium in nuclear reactors produces 237 Np which has a half-life of 2.1 4 x 10 6 years. Consequently, the transport of 237 Np through tuffs is of major importance in assessing the performance of a high-level nuclear waste repository at Yucca Mountain. The objective of this work is to determine the amount of Np retardation that is provided by the minerals in Yucca Mountain tuffs as a function of groundwater chemistry

  17. Biogenic iron mineralization at Iron Mountain, CA with implications for detection with the Mars Curiosity rover

    Science.gov (United States)

    Williams, Amy J.; Sumner, Dawn Y.; Alpers, Charles N.; Campbell, Kate M.; Nordstrom, D. Kirk

    2014-01-01

    (Introduction) Microbe-mineral interactions and biosignature preservation in oxidized sulfidic ore bodies (gossans) are prime candidates for astrobiological study. Such oxidized iron systems have been proposed as analogs for some Martian environments. Recent studies identified microbial fossils preserved as mineral-coated filaments. This study documents microbially-mediated mineral biosignatures in hydrous ferric oxide (HFO) and ferric oxyhydroxysulfates (FOHS) in three environments at Iron Mountain, CA. We investigated microbial community preservation via HFO and FOHS precipitation and the formation of filamentous mineral biosignatures. These environments included 1) actively precipitating (1000's yrs), naturally weathered HFO from in situ gossan, and 3) remobilized iron deposits, which contained lithified clastics and zones of HFO precipitate. We used published biogenicity criteria as guidelines to characterize the biogenicity of mineral filaments. These criteria included A) an actively precipitating environment where microbes are known to be coated in minerals, B) presence of extant microbial communities with carbon signatures, C) structures observable as a part of the host rock, and D) biological morphology, including cellular lumina, multiple member population, numerous taxa, variable and 3-D preservation, biological size ranges, uniform diameter, and evidence of flexibility. This study explores the relevance and detection of these biosignatures to possible Martian biosignatures. Similar filamentous biosignatures are resolvable by the Mars Hand Lens Imager (MAHLI) onboard the Mars Science Laboratory (MSL) rover, Curiosity, and may be identifiable as biogenic if present on Mars.

  18. Microbial products II

    Energy Technology Data Exchange (ETDEWEB)

    Pape, H; Rehm, H J [eds.

    1986-01-01

    The present volume deals mainly with compounds which have been detected as natural microbial products. Part 1 of this volume introduces the general aspects of the overproduction of metabolites and the concepts and genetics of secondary metabolism. Compounds such as nucleosides, nucleotides, coenzymes, vitamins and lipids are dealt with in part 2. Part 3 then is devoted to products and antibiotics with uses im medicine, veterinary medicine, plant protection and metabolites with antitumor activity. Several secondary metabolites have found uses in human and animal health care. With 244 figs., 109 tabs.

  19. Microbial bebop: creating music from complex dynamics in microbial ecology.

    Directory of Open Access Journals (Sweden)

    Peter Larsen

    Full Text Available In order for society to make effective policy decisions on complex and far-reaching subjects, such as appropriate responses to global climate change, scientists must effectively communicate complex results to the non-scientifically specialized public. However, there are few ways however to transform highly complicated scientific data into formats that are engaging to the general community. Taking inspiration from patterns observed in nature and from some of the principles of jazz bebop improvisation, we have generated Microbial Bebop, a method by which microbial environmental data are transformed into music. Microbial Bebop uses meter, pitch, duration, and harmony to highlight the relationships between multiple data types in complex biological datasets. We use a comprehensive microbial ecology, time course dataset collected at the L4 marine monitoring station in the Western English Channel as an example of microbial ecological data that can be transformed into music. Four compositions were generated (www.bio.anl.gov/MicrobialBebop.htm. from L4 Station data using Microbial Bebop. Each composition, though deriving from the same dataset, is created to highlight different relationships between environmental conditions and microbial community structure. The approach presented here can be applied to a wide variety of complex biological datasets.

  20. Microbial bebop: creating music from complex dynamics in microbial ecology.

    Science.gov (United States)

    Larsen, Peter; Gilbert, Jack

    2013-01-01

    In order for society to make effective policy decisions on complex and far-reaching subjects, such as appropriate responses to global climate change, scientists must effectively communicate complex results to the non-scientifically specialized public. However, there are few ways however to transform highly complicated scientific data into formats that are engaging to the general community. Taking inspiration from patterns observed in nature and from some of the principles of jazz bebop improvisation, we have generated Microbial Bebop, a method by which microbial environmental data are transformed into music. Microbial Bebop uses meter, pitch, duration, and harmony to highlight the relationships between multiple data types in complex biological datasets. We use a comprehensive microbial ecology, time course dataset collected at the L4 marine monitoring station in the Western English Channel as an example of microbial ecological data that can be transformed into music. Four compositions were generated (www.bio.anl.gov/MicrobialBebop.htm.) from L4 Station data using Microbial Bebop. Each composition, though deriving from the same dataset, is created to highlight different relationships between environmental conditions and microbial community structure. The approach presented here can be applied to a wide variety of complex biological datasets.

  1. High bacterial diversity in epilithic biofilms of oligotrophic mountain lakes.

    Science.gov (United States)

    Bartrons, Mireia; Catalan, Jordi; Casamayor, Emilio O

    2012-11-01

    Benthic microbial biofilms attached to rocks (epilithic) are major sites of carbon cycling and can dominate ecosystem primary production in oligotrophic lakes. We studied the bacterial community composition of littoral epilithic biofilms in five connected oligotrophic high mountain lakes located at different altitudes by genetic fingerprinting and clone libraries of the 16S rRNA gene. Different intra-lake samples were analyzed, and consistent changes in community structure (chlorophyll a and organic matter contents, and bacterial community composition) were observed along the altitudinal gradient, particularly related with the location of the lake above or below the treeline. Epilithic biofilm genetic fingerprints were both more diverse among lakes than within lakes and significantly different between montane (below the tree line) and alpine lakes (above the tree line). The genetic richness in the epilithic biofilm was much higher than in the plankton of the same lacustrine area studied in previous works, with significantly idiosyncratic phylogenetic composition (specifically distinct from lake plankton or mountain soils). Data suggest the coexistence of aerobic, anaerobic, phototrophic, and chemotrophic microorganisms in the biofilm, Bacteroidetes and Cyanobacteria being the most important bacterial taxa, followed by Alpha-, Beta-, Gamma-, and Deltaproteobacteria, Chlorobi, Planctomycetes, and Verrucomicrobia. The degree of novelty was especially high for epilithic Bacteroidetes, and up to 50 % of the sequences formed monophyletic clusters distantly related to any previously reported sequence. More than 35 % of the total sequences matched at <95 % identity to any previously reported 16S rRNA gene, indicating that alpine epilithic biofilms are unexplored habitats that contain a substantial degree of novelty within a short geographical distance. Further research is needed to determine whether these communities are involved in more biogeochemical pathways than

  2. Microbial Invasion vs. Tick Immune Regulation.

    Science.gov (United States)

    Sonenshine, Daniel E; Macaluso, Kevin R

    2017-01-01

    Ticks transmit a greater variety of pathogenic agents that cause disease in humans and animals than any other haematophagous arthropod, including Lyme disease, Rocky Mountain spotted fever, human granulocytic anaplasmosis, babesiosis, tick-borne encephalitis, Crimean Congo haemorhagic fever, and many others (Gulia-Nuss et al., 2016). Although diverse explanations have been proposed to explain their remarkable vectorial capacity, among the most important are their blood feeding habit, their long term off-host survival, the diverse array of bioactive molecules that disrupt the host's natural hemostatic mechanisms, facilitate blood flow, pain inhibitors, and minimize inflammation to prevent immune rejection (Hajdušek et al., 2013). Moreover, the tick's unique intracellular digestive processes allow the midgut to provide a relatively permissive microenvironment for survival of invading microbes. Although tick-host-pathogen interactions have evolved over more than 300 million years (Barker and Murrell, 2008), few microbes have been able to overcome the tick's innate immune system, comprising both humoral and cellular processes that reject them. Similar to most eukaryotes, the signaling pathways that regulate the innate immune response, i.e., the Toll, IMD (Immunodeficiency) and JAK-STAT (Janus Kinase/ Signal Transducers and Activators of Transcription) also occur in ticks (Gulia-Nuss et al., 2016). Recognition of pathogen-associated molecular patterns (PAMPs) on the microbial surface triggers one or the other of these pathways. Consequently, ticks are able to mount an impressive array of humoral and cellular responses to microbial challenge, including anti-microbial peptides (AMPs), e.g., defensins, lysozymes, microplusins, etc., that directly kill, entrap or inhibit the invaders. Equally important are cellular processes, primarily phagocytosis, that capture, ingest, or encapsulate invading microbes, regulated by a primordial system of thioester-containing proteins

  3. Microbial DNA; a possible tracer of groundwater

    Science.gov (United States)

    Sugiyama, Ayumi; Segawa, Takuya; Furuta, Tsuyumi; Nagaosa, Kazuyo; Tsujimura, Maki; Kato, Kenji

    2017-04-01

    Though chemical analysis of groundwater shows an averaged value of chemistry of the examined water which was blended by various water with different sources and routes in subsurface environment, microbial DNA analysis may suggest the place where they originated, which may give information of the source and transport routes of the water examined. A huge amount of groundwater is stored in lava layer with maximum depth of 300m in Mt. Fuji (3,776m asl ), the largest volcanic mountain in Japan. Although the density of prokaryotes was low in the examined groundwater of Mt. Fuji, thermophilic prokaryotes as Thermoanaerobacterales, Gaiellales and Thermoplasmatales were significantly detected. They are optimally adapted to the temperature higher than 40oC. This finding suggests that at least some of the source of the examined groundwater was subsurface environment with 600m deep or greater, based on a temperature gradient of 4oC/100m and temperature of spring water ranges from 10 to 15oC in the foot of Mt. Fuji. This depth is far below the lava layer. Thus, the groundwater is not simply originated from the lava layer. In addition to those findings, we observed a very fast response of groundwater just a couple of weeks after the heavy rainfall exceeding 2 or 300 mm/event in Mt. Fuji. The fast response was suggested by a sharp increase in bacterial abundance in spring water located at 700m in height in the west foot of Mt. Fuji, where the average recharge elevation of groundwater was estimated to be 1,500m - 1,700m (Kato et. al. EGU 2016). This increase was mainly provided by soil bacteria as Burkholderiales, which might be detached from soil by strengthened subsurface flow caused by heavy rainfall. This suggests that heavy rainfall promotes shallow subsurface flow contributing to the discharge in addition to the groundwater in the deep aquifer. Microbial DNA, thus could give information about the route of the examined groundwater, which was never elucidated by analysis of

  4. Microbial Invasion vs. Tick Immune Regulation

    Directory of Open Access Journals (Sweden)

    Daniel E. Sonenshine

    2017-09-01

    Full Text Available Ticks transmit a greater variety of pathogenic agents that cause disease in humans and animals than any other haematophagous arthropod, including Lyme disease, Rocky Mountain spotted fever, human granulocytic anaplasmosis, babesiosis, tick-borne encephalitis, Crimean Congo haemorhagic fever, and many others (Gulia-Nuss et al., 2016. Although diverse explanations have been proposed to explain their remarkable vectorial capacity, among the most important are their blood feeding habit, their long term off-host survival, the diverse array of bioactive molecules that disrupt the host's natural hemostatic mechanisms, facilitate blood flow, pain inhibitors, and minimize inflammation to prevent immune rejection (Hajdušek et al., 2013. Moreover, the tick's unique intracellular digestive processes allow the midgut to provide a relatively permissive microenvironment for survival of invading microbes. Although tick-host-pathogen interactions have evolved over more than 300 million years (Barker and Murrell, 2008, few microbes have been able to overcome the tick's innate immune system, comprising both humoral and cellular processes that reject them. Similar to most eukaryotes, the signaling pathways that regulate the innate immune response, i.e., the Toll, IMD (Immunodeficiency and JAK-STAT (Janus Kinase/ Signal Transducers and Activators of Transcription also occur in ticks (Gulia-Nuss et al., 2016. Recognition of pathogen-associated molecular patterns (PAMPs on the microbial surface triggers one or the other of these pathways. Consequently, ticks are able to mount an impressive array of humoral and cellular responses to microbial challenge, including anti-microbial peptides (AMPs, e.g., defensins, lysozymes, microplusins, etc., that directly kill, entrap or inhibit the invaders. Equally important are cellular processes, primarily phagocytosis, that capture, ingest, or encapsulate invading microbes, regulated by a primordial system of thioester

  5. Small-scale spatial heterogeneity of ecosystem properties, microbial community composition and microbial activities in a temperate mountain forest soil

    Czech Academy of Sciences Publication Activity Database

    Štursová, Martina; Bárta, J.; Šantrůčková, H.; Baldrian, Petr

    2016-01-01

    Roč. 92, č. 12 (2016), fiw185 ISSN 0168-6496 R&D Projects: GA ČR GA526/08/0751; GA ČR(CZ) GA16-08916S Institutional support: RVO:61388971 Keywords : spatial heterogeneity * litter * soil Subject RIV: EE - Microbiology, Virology Impact factor: 3.720, year: 2016

  6. Annual Copper Mountain Conferences on Multigrid and Iterative Methods, Copper Mountain, Colorado

    International Nuclear Information System (INIS)

    McCormick, Stephen F.

    2016-01-01

    This project supported the Copper Mountain Conference on Multigrid and Iterative Methods, held from 2007 to 2015, at Copper Mountain, Colorado. The subject of the Copper Mountain Conference Series alternated between Multigrid Methods in odd-numbered years and Iterative Methods in even-numbered years. Begun in 1983, the Series represents an important forum for the exchange of ideas in these two closely related fields. This report describes the Copper Mountain Conference on Multigrid and Iterative Methods, 2007-2015. Information on the conference series is available at http://grandmaster.colorado.edu/~copper/

  7. Recent population trends of mountain goats in the Olympic Mountains, Washington

    Science.gov (United States)

    Jenkins, Kurt J.; Happe, Patricia J.; Beirne, Katherine F.; Hoffman, Roger A.; Griffin, Paul C.; Baccus, William T.; Fieberg, John

    2012-01-01

    Mountain goats (Oreamnos americanus) were introduced in Washington's Olympic Mountains during the 1920s. The population subsequently increased in numbers and expanded in range, leading to concerns by the 1970s over the potential effects of non-native mountain goats on high-elevation plant communities in Olympic National Park. The National Park Service (NPS) transplanted mountain goats from the Olympic Mountains to other ranges between 1981 and 1989 as a means to manage overabundant populations, and began monitoring population trends of mountain goats in 1983. We estimated population abundance of mountain goats during 18–25 July 2011, the sixth survey of the time series, to assess current population status and responses of the population to past management. We surveyed 39 sample units, comprising 39% of the 59,615-ha survey area. We estimated a population of 344 ± 72 (90% confidence interval [CI]) mountain goats in the survey area. Retrospective analysis of the 2004 survey, accounting for differences in survey area boundaries and methods of estimating aerial detection biases, indicated that the population increased at an average annual rate of 4.9% since the last survey. That is the first population growth observed since the cessation of population control measures in 1990. We postulate that differences in population trends observed in western, eastern, and southern sections of the survey zone reflected, in part, a variable influence of climate change across the precipitation gradient in the Olympic Mountains.

  8. Annual Copper Mountain Conferences on Multigrid and Iterative Methods, Copper Mountain, Colorado

    Energy Technology Data Exchange (ETDEWEB)

    McCormick, Stephen F. [Front Range Scientific, Inc., Lake City, CO (United States)

    2016-03-25

    This project supported the Copper Mountain Conference on Multigrid and Iterative Methods, held from 2007 to 2015, at Copper Mountain, Colorado. The subject of the Copper Mountain Conference Series alternated between Multigrid Methods in odd-numbered years and Iterative Methods in even-numbered years. Begun in 1983, the Series represents an important forum for the exchange of ideas in these two closely related fields. This report describes the Copper Mountain Conference on Multigrid and Iterative Methods, 2007-2015. Information on the conference series is available at http://grandmaster.colorado.edu/~copper/.

  9. Radioecological situation in the Khibiny mountains

    International Nuclear Information System (INIS)

    Sedova, N.B.

    2008-01-01

    Radioecological situation in the Khibiny Mountains is considered. Two former areas of engineering nuclear explosions are monitored. The accumulation and migration of radionuclides in soil, vegetation and snow are examined.

  10. VT Green Mountain Power Pole Data

    Data.gov (United States)

    Vermont Center for Geographic Information — (Link to Metadata) Green Mountain Power (GMP) pole and OVERHEAD linear distribution/sub-transmission model data. THE LINEAR DISTRIBUTION LAYER ONLY INCLUDES OVERHEAD...

  11. VT Green Mountain National Forest - Roads

    Data.gov (United States)

    Vermont Center for Geographic Information — (Link to Metadata) GMNFTRAILS contains minor Forest Service roads and all trails within the proclamation boundary of the Green Mountain National Forest and many of...

  12. Mountain Wave Analysis Using Fourier Methods

    National Research Council Canada - National Science Library

    Roadcap, John R

    2007-01-01

    ...) their requirements for only a coarse horizontal background state. Common traits of Fourier mountain wave models include use of the Boussinesq approximation and neglect of moisture and Coriolis terms...

  13. MOUNTAIN TOURISM-PLEASURE AND NECESSITY

    Directory of Open Access Journals (Sweden)

    Gabriela Corina SLUSARIUC

    2015-07-01

    Full Text Available Tourism has a more and more important role in the economic development of many countries. Mountain tourism is an anti-stress solutions and a type of disconnection from the citadel life style through replacing some activities of media consuming type, games and virtual socializing with therapy through movement, the physical activity being an essential dimension in assuring the high life quality. Mountaineering is searched for: practicing winter sports, its invigorating and comforting, relaxing role, medical spa treatments practicing hiking, alpinism. Mountain tourism generates increased economic benefits for the surrounding areas, improves the life quality of the local communities and can assure the prosperity of some disadvantaged areas, being able to be a remedy for unindustrialised regions. Mountain tourism contributes to the economic development of the region and also to satisfying spiritual and psychological needs of the people, representing a necessity for a touristic area and a pleasure for tourist consumers.

  14. Nuclear Waste Disposal: Alternatives to Yucca Mountain

    National Research Council Canada - National Science Library

    Holt, Mark

    2009-01-01

    Congress designated Yucca Mountain, NV, as the nation's sole candidate site for a permanent high-level nuclear waste repository in 1987, following years of controversy over the site-selection process...

  15. Alternative transportation study : Wichita Mountains Wildlife Refuge

    Science.gov (United States)

    2010-08-01

    This report provides an assessment of historic and current visitation, infrastructure, and transportation conditions at the Wichita Mountains Wildlife Refuge and surrounding areas in southwest Oklahoma. The study defines transportation-related goals ...

  16. VT Green Mountain National Forest - Trails

    Data.gov (United States)

    Vermont Center for Geographic Information — (Link to Metadata) GMNFTRAILS contains minor Forest Service roads and all trails within the proclamation boundary of the Green Mountain National Forest and many of...

  17. Microbial ecology of phototrophic biofilms

    NARCIS (Netherlands)

    Roeselers, G.

    2007-01-01

    Biofilms are layered structures of microbial cells and an extracellular matrix of polymeric substances, associated with surfaces and interfaces. Biofilms trap nutrients for growth of the enclosed microbial community and help prevent detachment of cells from surfaces in flowing systems. Phototrophic

  18. Rethinking risk and disasters in mountain areas

    OpenAIRE

    Hewitt, Kenneth; Mehta, Manjari

    2012-01-01

    This chapter presents a view of risk and disaster in the mountains that finds them fully a part of public safety issues in modern states and developments, rather than separated from them. This contrasts with prevailing approaches to disaster focused on natural hazards, “unscheduled” or extreme events, and emergency preparedness; approaches strongly reinforced by mountain stereotypes. Rather, we find the legacies of social and economic histories, especially relations to down-country or metropo...

  19. AHP 35: An Abandoned Mountain Deity

    Directory of Open Access Journals (Sweden)

    Limusishiden (Li Dechun 李得春

    2015-02-01

    Full Text Available Lasizi are cairns where mountain deities dwell, and the same word also refers to the deities that dwell in these cairns. There are many lasizi in Tu areas in Huzhu Tu Autonomous County, Haidong Municipality, Qinghai Province. The most famous are: Chileb, located in the north part of both Danma Town and Donggou Township Durizang, located in the northern part of Wushi Town Lawa, located atop a mountain on the border between Danma Town and Wushi Town. The mountain is referred to as Lawa Lasizi. Lawa Village is located at the foot of Lawa Lasizi's west side, which is within Danma Town territory. Tughuan Village is located at the foot of Lawa Lasizi's east side, which belongs is within Wushi Town jurisdiction. Sughua, located atop a mountain on the border between Danma Town and Dongshan Township. The mountain is locally known as Sughua Lasizi. Qighaan Dawa Village is located at the foot of Sughua Lasizi's west side, which is part of Dongshan Township. Sughua Village is located at the foot of Sughua Lasizi's east side, which is part of belongs Danma Town. Walighuan, located atop a mountain in Hongyazigou Township and Sunduu, located on the border between Songduo and Bazha (two autonomous Tibetan townships in Huzhu County and Ledu Region. ...

  20. Hydrodynamics of microbial filter feeding

    DEFF Research Database (Denmark)

    Nielsen, Lasse Tor; Asadzadeh, Seyed Saeed; Dölger, Julia

    2017-01-01

    Microbial filter feeders are an important group of grazers, significant to the microbial loop, aquatic food webs, and biogeochemical cycling. Our understanding of microbial filter feeding is poor, and, importantly, it is unknown what force microbial filter feeders must generate to process adequate......-feeding choanoflagellate Diaphanoeca grandis using particle tracking, and demonstrate that the current understanding of microbial filter feeding is inconsistent with computational fluid dynamics (CFD) and analytical estimates. Both approaches underestimate observed filtration rates by more than an order of magnitude......; the beating flagellum is simply unable to draw enough water through the fine filter. We find similar discrepancies for other choanoflagellate species, highlighting an apparent paradox. Our observations motivate us to suggest a radically different filtration mechanism that requires a flagellar vane (sheet...

  1. Scientific progress at Yucca Mountain

    International Nuclear Information System (INIS)

    Gertz, C.P.

    1990-01-01

    The US Department of Energy (DOE) is moving forward with studies to determine whether Yucca Mountain, Nevada, would be a suitable site for the nation's first high-level radioactive waste repository; however, the DOE's Congressionally mandated task of characterizing the site has been severely delayed by a lack of cooperation from the state of Nevada. The state has refused to issue the appropriate permits that must be obtained before surface disturbing studies can proceed; therefore, an extensive surface-based drilling and trenching program and construction of underground exploration facilities are on hold until pending litigation between the DOE and Nevada has been resolved. Despite this major impasse, significant scientific progress has been made, and the DOE is aggressively pursuing investigations that can be conducted without the state-issued permits. Additionally, the DOE is developing a high-quality technical and management structure as well as equipment, plans, and quality assurance procedures, so that the scientific investigation program can proceed without delay once the appropriate permits are obtained

  2. ADVANCES IN YUCCA MOUNTAIN DESIGN

    International Nuclear Information System (INIS)

    Harrington, P.G.; Gardiner, J.T.; Russell, P.R.Z.; Lachman, K.D.; McDaniel, P.W.; Boutin, R.J.; Brown, N.R.; Trautner, L.J.

    2003-01-01

    Since site designation of the Yucca Mountain Project by the President, the U.S. Department of Energy (DOE) has begun the transition from the site characterization phase of the project to preparation of the license application. As part of this transition, an increased focus has been applied to the repository design. Several evolution studies were performed to evaluate the repository design and to determine if improvements in the design were possible considering advances in the technology for handling and packaging nuclear materials. The studies' main focus was to reduce and/or eliminate uncertainties in both the pre-closure and post-closure performance of the repository and to optimize operations. The scope and recommendations from these studies are the subjects of this paper and include the following topics: (1) a more phased approach for the surface facility that utilize handling and packaging of the commercial spent nuclear fuel in a dry environment rather than in pools as was presented in the site recommendation; (2) slight adjustment of the repository footprint and a phased approach for construction and emplacement of the repository subsurface; and (3) simplification of the construction, fabrication and installation of the waste package and drip shield

  3. Data-model integration to interpret connectivity between biogeochemical cycling, and vegetation phenology and productivity in mountainous ecosystems under changing hydrologic regimes

    Science.gov (United States)

    Brodie, E.; Arora, B.; Beller, H. R.; Bill, M.; Bouskill, N.; Chakraborty, R.; Conrad, M. E.; Dafflon, B.; Enquist, B. J.; Falco, N.; Henderson, A.; Karaoz, U.; Polussa, A.; Sorensen, P.; Steltzer, H.; Wainwright, H. M.; Wang, S.; Williams, K. H.; Wilmer, C.; Wu, Y.

    2017-12-01

    In mountainous systems, snow-melt is associated with a large pulse of nutrients that originates from under-snow microbial mineralization of organic matter and microbial biomass turnover. Vegetation phenology in these systems is regulated by environmental cues such as air temperature ranges and photoperiod, such that, under typical conditions, vegetation greening and nutrient uptake occur in sync with microbial biomass turnover and nutrient release, closing nutrient cycles and enhancing nutrient retention. However, early snow-melt has been observed with increasing frequency in the mountainous west and is hypothesized to disrupt coupled plant-microbial behavior, potentially resulting in a temporal discontinuity between microbial nutrient release and vegetation greening. As part of the Watershed Function Scientific Focus Area (SFA) at Berkeley Lab we are quantifying below-ground biogeochemistry and above-ground phenology and vegetation chemistry and their relationships to hydrologic events at a lower montane hillslope in the East River catchment, Crested Butte, CO. This presentation will focus on data-model integration to interpret connectivity between biogeochemical cycling of nitrogen and vegetation nitrogen demand. Initial model results suggest that early snow-melt will result in an earlier accumulation and leaching loss of nitrate from the upper soil depths but that vegetation productivity may not decline as traits such as greater rooting depth and resource allocation to stems are favored.

  4. Soil microbial biomass, activity and community composition along altitudinal gradients in the High Arctic (Billefjorden, Svalbard

    Directory of Open Access Journals (Sweden)

    P. Kotas

    2018-03-01

    Full Text Available The unique and fragile High Arctic ecosystems are vulnerable to global climate warming. The elucidation of factors driving microbial distribution and activity in arctic soils is essential for a comprehensive understanding of ecosystem functioning and its response to environmental change. The goals of this study were to investigate microbial biomass and activity, microbial community structure (MCS, and their environmental controls in soils along three elevational transects in the coastal mountains of Billefjorden, central Svalbard. Soils from four different altitudes (25, 275, 525 and 765 m above sea level were analyzed for a suite of characteristics including temperature regimes, organic matter content, base cation availability, moisture, pH, potential respiration, and microbial biomass and community structure using phospholipid fatty acids (PLFAs. We observed significant spatial heterogeneity of edaphic properties among transects, resulting in transect-specific effects of altitude on most soil parameters. We did not observe any clear elevation pattern in microbial biomass, and microbial activity revealed contrasting elevational patterns between transects. We found relatively large horizontal variability in MCS (i.e., between sites of corresponding elevation in different transects, mainly due to differences in the composition of bacterial PLFAs, but also a systematic altitudinal shift in MCS related to different habitat preferences of fungi and bacteria, which resulted in high fungi-to-bacteria ratios at the most elevated sites. The biological soil crusts on these most elevated, unvegetated sites can host microbial assemblages of a size and activity comparable to those of the arctic tundra ecosystem. The key environmental factors determining horizontal and vertical changes in soil microbial properties were soil pH, organic carbon content, soil moisture and Mg2+ availability.

  5. Soil microbial biomass, activity and community composition along altitudinal gradients in the High Arctic (Billefjorden, Svalbard)

    Science.gov (United States)

    Kotas, Petr; Šantrůčková, Hana; Elster, Josef; Kaštovská, Eva

    2018-03-01

    The unique and fragile High Arctic ecosystems are vulnerable to global climate warming. The elucidation of factors driving microbial distribution and activity in arctic soils is essential for a comprehensive understanding of ecosystem functioning and its response to environmental change. The goals of this study were to investigate microbial biomass and activity, microbial community structure (MCS), and their environmental controls in soils along three elevational transects in the coastal mountains of Billefjorden, central Svalbard. Soils from four different altitudes (25, 275, 525 and 765 m above sea level) were analyzed for a suite of characteristics including temperature regimes, organic matter content, base cation availability, moisture, pH, potential respiration, and microbial biomass and community structure using phospholipid fatty acids (PLFAs). We observed significant spatial heterogeneity of edaphic properties among transects, resulting in transect-specific effects of altitude on most soil parameters. We did not observe any clear elevation pattern in microbial biomass, and microbial activity revealed contrasting elevational patterns between transects. We found relatively large horizontal variability in MCS (i.e., between sites of corresponding elevation in different transects), mainly due to differences in the composition of bacterial PLFAs, but also a systematic altitudinal shift in MCS related to different habitat preferences of fungi and bacteria, which resulted in high fungi-to-bacteria ratios at the most elevated sites. The biological soil crusts on these most elevated, unvegetated sites can host microbial assemblages of a size and activity comparable to those of the arctic tundra ecosystem. The key environmental factors determining horizontal and vertical changes in soil microbial properties were soil pH, organic carbon content, soil moisture and Mg2+ availability.

  6. Monitoring Microbially Influenced Corrosion

    DEFF Research Database (Denmark)

    Hilbert, Lisbeth Rischel

    and diffusional effects and unreliable corrosion rates, when biofilm and ferrous sulphide corrosion products cover the steel surface. Corrosion rates can be overestimated by a factor of 10 to 100 by electrochemical techniques. Weight loss coupons and ER are recommended as necessary basic monitoring techniques......Abstract Microbially influenced corrosion (MIC) of carbon steel may occur in media with microbiological activity of especially sulphate-reducing bacteria (SRB). The applicability and reliability of a number of corrosion monitoring techniques for monitoring MIC has been evaluated in experiments....... EIS might be used for detection of MIC as the appearance of very large capacitances can be attributed to the combined ferrous sulphide and biofilm formation. Capacitance correlates directly with sulphide concentration in sterile sulphide media. Keywords: Corrosion monitoring, carbon steel, MIC, SRB...

  7. New microbial growth factor

    Science.gov (United States)

    Bok, S. H.; Casida, L. E., Jr.

    1977-01-01

    A screening procedure was used to isolate from soil a Penicillium sp., two bacterial isolates, and a Streptomyces sp. that produced a previously unknown microbial growth factor. This factor was an absolute growth requirement for three soil bacteria. The Penicillium sp. and one of the bacteria requiring the factor, an Arthrobacter sp., were selected for more extensive study concerning the production and characteristics of the growth factor. It did not seem to be related to the siderochromes. It was not present in soil extract, rumen fluid, or any other medium component tested. It appears to be a glycoprotein of high molecular weight and has high specific activity. When added to the diets for a meadow-vole mammalian test system, it caused an increased consumption of diet without a concurrent increase in rate of weight gain.

  8. Reconnaissance and economic geology of Copper Mountain metamorphic complex, Owl Creek Mountains, Wyoming

    International Nuclear Information System (INIS)

    Hausel, W.D.

    1983-01-01

    The Copper Mountain metamorphic complex lies within a westerly trending belt of Precambrian exposures known as the Owl Creek Mountains uplift. The metamorphic complex at Copper Mountain is part of a larger complex known as the Owl Creek Mountains greenstone belt. Until more detailed mapping and petrographic studies can be completed, the Copper Mountain area is best referred to as a complex, even though it has some characteristics of a greestone belt. At least three episodes of Precambrian deformation have affected the supracrustals, and two have disturbed the granites. The final Precambrian deformation event was preceded by a weak thermal event expressed by retrogressive metamorphism and restricted metasomatic alteration. During this event, a second phase of pegmatization was accompanied by hydrothermal solutions. During the Laramide orogeny, Copper Mountain was again modified by deformation. Laramide deformation produced complex gravity faults and keystone grabens. Uranium deposits were formed following major Laramide deformation. The genesis of these deposits is attributable to either the leaching of granites or the leaching of overlying tuffaceous sediments during the Tertiary. Production of metals and industrial minerals has been limited, although some gold, copper, silver, tungsten, beryl, feldspar, and lithium ore have been shipped from Copper Mountain. A large amount of uranium was produced from the Copper Mountain district in the 1950s

  9. The maturing of microbial ecology.

    Science.gov (United States)

    Schmidt, Thomas M

    2006-09-01

    A.J. Kluyver and C.B. van Niel introduced many scientists to the exceptional metabolic capacity of microbes and their remarkable ability to adapt to changing environments in The Microbe's Contribution to Biology. Beyond providing an overview of the physiology and adaptability of microbes, the book outlined many of the basic principles for the emerging discipline of microbial ecology. While the study of pure cultures was highlighted, provided a unifying framework for understanding the vast metabolic potential of microbes and their roles in the global cycling of elements, extrapolation from pure cultures to natural environments has often been overshadowed by microbiologists inability to culture many of the microbes seen in natural environments. A combination of genomic approaches is now providing a culture-independent view of the microbial world, revealing a more diverse and dynamic community of microbes than originally anticipated. As methods for determining the diversity of microbial communities become increasingly accessible, a major challenge to microbial ecologists is to link the structure of natural microbial communities with their functions. This article presents several examples from studies of aquatic and terrestrial microbial communities in which culture and culture-independent methods are providing an enhanced appreciation for the microbe's contribution to the evolution and maintenance of life on Earth, and offers some thoughts about the graduate-level educational programs needed to enhance the maturing field of microbial ecology.

  10. Global microbialization of coral reefs.

    Science.gov (United States)

    Haas, Andreas F; Fairoz, Mohamed F M; Kelly, Linda W; Nelson, Craig E; Dinsdale, Elizabeth A; Edwards, Robert A; Giles, Steve; Hatay, Mark; Hisakawa, Nao; Knowles, Ben; Lim, Yan Wei; Maughan, Heather; Pantos, Olga; Roach, Ty N F; Sanchez, Savannah E; Silveira, Cynthia B; Sandin, Stuart; Smith, Jennifer E; Rohwer, Forest

    2016-04-25

    Microbialization refers to the observed shift in ecosystem trophic structure towards higher microbial biomass and energy use. On coral reefs, the proximal causes of microbialization are overfishing and eutrophication, both of which facilitate enhanced growth of fleshy algae, conferring a competitive advantage over calcifying corals and coralline algae. The proposed mechanism for this competitive advantage is the DDAM positive feedback loop (dissolved organic carbon (DOC), disease, algae, microorganism), where DOC released by ungrazed fleshy algae supports copiotrophic, potentially pathogenic bacterial communities, ultimately harming corals and maintaining algal competitive dominance. Using an unprecedented data set of >400 samples from 60 coral reef sites, we show that the central DDAM predictions are consistent across three ocean basins. Reef algal cover is positively correlated with lower concentrations of DOC and higher microbial abundances. On turf and fleshy macroalgal-rich reefs, higher relative abundances of copiotrophic microbial taxa were identified. These microbial communities shift their metabolic potential for carbohydrate degradation from the more energy efficient Embden-Meyerhof-Parnas pathway on coral-dominated reefs to the less efficient Entner-Doudoroff and pentose phosphate pathways on algal-dominated reefs. This 'yield-to-power' switch by microorganism directly threatens reefs via increased hypoxia and greater CO2 release from the microbial respiration of DOC.

  11. Microbial biosensors for environmental monitoring

    Directory of Open Access Journals (Sweden)

    David VOGRINC

    2015-12-01

    Full Text Available Microbial biosensors are analytical devices capable of sensing substances in the environment due to the specific biological reaction of the microorganism or its parts. Construction of a microbial biosensor requires knowledge of microbial response to the specific analyte. Linking this response with the quantitative data, using a transducer, is the crucial step in the construction of a biosensor. Regarding the transducer type, biosensors are divided into electrochemical, optical biosensors and microbial fuel cells. The use of the proper configuration depends on the selection of the biosensing element. With the use of transgenic E. coli strains, bioluminescence or fluorescence based biosensors were developed. Microbial fuel cells enable the use of the heterogeneous microbial populations, isolated from wastewater. Different microorganisms are used for different pollutants – pesticides, heavy metals, phenolic compounds, organic waste, etc. Biosensing enables measurement of their concentration and their toxic or genotoxic effects on the microbes. Increasing environmental awareness has contributed to the increase of interest for biomonitoring. Although technologies, such as bioinformatics and genetic engineering, allow us to design complex and efficient microbial biosensors for environmental pollutants, the transfer of the laboratory work to the field still remains a problem to solve.

  12. Microbial electrode sensor for alcohols

    Energy Technology Data Exchange (ETDEWEB)

    Hikuma, M [Ajinomoto Co., Inc., Kawasaki, Japan; Kubo, T; Yasuda, T; Karube, I; Suzuki, S

    1979-10-01

    A microbial electrode consisting of immobilized microorganisms, a gas permeable Teflon membrane, and an oxygen electrode was prepared for the continuous determination of methyl and ethyl alcohols. Immobilized Trichosporon brassicae was employed for a microbial electrode sensor for ethyl alcohol. When a sample solution containing ethyl alcohol was injected into a microbial electrode system, the current of the electrode decreased markedly with time until a steady state was reached. The response time was within 10 min by the steady state method and within 6 min by the pulse method. A linear relationship was observed between the current decrease and the concentration of ethyl alcohol below 22.5 mg/liter. The current was reproducible within +- 6% of the relative error when a sample solution containing 16.5 mg/liter ethyl alcohol. The standard deviation was 0.5 mg/liter in 40 experiments. The selectivity of the microbial electrode sensor for ethyl alcohol was satisfactory. The microbial electrode sensor was applied to a fermentation broth of yeasts and satisfactory comparative results were obtained (correlation coefficient 0.98). The current output of the microbial electrode sensor was almost constant for more than three weeks and 2100 assays. A microbial electrode sensor using immobilized bacteria for methyl alcohol was also described.

  13. Anti-Atlas Mountains, Morocco

    Science.gov (United States)

    2003-01-01

    The Anti-Atlas Mountains of Morocco formed as a result of the collision of the African and Eurasian tectonic plates about 80 million years ago. This collision destroyed the Tethys Ocean; the limestone, sandstone, claystone, and gypsum layers that formed the ocean bed were folded and crumpled to create the Atlas and Anti-Atlas Mountains. In this ASTER image, short wavelength infrared bands are combined to dramatically highlight the different rock types, and illustrate the complex folding. The yellowish, orange and green areas are limestones, sandstones and gypsum; the dark blue and green areas are underlying granitic rocks. The ability to map geology using ASTER data is enhanced by the multiple short wavelength infrared bands, that are sensitive to differences in rock mineralogy. This image was acquired on June 13, 2001 by the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) on NASA's Terra satellite. With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet.ASTER is one of five Earth-observing instruments launched December 18, 1999, on NASA's Terra satellite. The instrument was built by Japan's Ministry of Economy, Trade and Industry. A joint U.S./Japan science team is responsible for validation and calibration of the instrument and the data products.The broad spectral coverage and high spectral resolution of ASTER will provide scientists in numerous disciplines with critical information for surface mapping, and monitoring of dynamic conditions and temporal change. Example applications are: monitoring glacial advances and retreats; monitoring potentially active volcanoes; identifying crop stress; determining cloud morphology and physical properties; wetlands evaluation; thermal pollution monitoring; coral reef degradation; surface temperature mapping of soils and

  14. Acid mine drainage biogeochemistry at Iron Mountain, California

    Directory of Open Access Journals (Sweden)

    Gihring Thomas M

    2004-06-01

    Full Text Available The Richmond Mine at Iron Mountain, Shasta County, California, USA provides an excellent opportunity to study the chemical and biological controls on acid mine drainage (AMD generation in situ, and to identify key factors controlling solution chemistry. Here we integrate four years of field-based geochemical data with 16S rRNA gene clone libraries and rRNA probe-based studies of microbial population structure, cultivation-based metabolic experiments, arsenopyrite surface colonization experiments, and results of intermediate sulfur species kinetics experiments to describe the Richmond Mine AMD system. Extremely acidic effluent (pH between 0.5 and 0.9 resulting from oxidation of approximately 1 × 105 to 2 × 105 moles pyrite/day contains up to 24 g/1 Fe, several g/1 Zn and hundreds of mg/l Cu. Geochemical conditions change markedly over time, and are reflected in changes in microbial populations. Molecular analyses of 232 small subunit ribosomal RNA (16S rRNA gene sequences from six sites during a sampling time when lower temperature (0.8 conditions predominated show the dominance of Fe-oxidizing prokaryotes such as Ferroplasma and Leptospirillum in the primary drainage communities. Leptospirillum group III accounts for the majority of Leptospirillum sequences, which we attribute to anomalous physical and geochemical regimes at that time. A couple of sites peripheral to the main drainage, "Red Pool" and a pyrite "Slump," were even higher in pH (>1 and the community compositions reflected this change in geochemical conditions. Several novel lineages were identified within the archaeal Thermoplasmatales order associated with the pyrite slump, and the Red Pool (pH 1.4 contained the only population of Acidithiobacillus. Relatively small populations of Sulfobacillus spp. and Acidithiobacillus caldus may metabolize elemental sulfur as an intermediate species in the oxidation of pyritic sulfide to sulfate. Experiments show that elemental sulfur which

  15. Rurality, ethnicity and mountain areas:

    Directory of Open Access Journals (Sweden)

    Anne-Laure Amilhat-Szary

    2009-07-01

    Full Text Available In a Latin American context where indigenous populations have had to wait until the end of the XXth century to recover a certain visibility, the definition of Andean identity is still an issue. In this paper, an analysis of the various steps in a territorially based collective movement provides insights into this identity that was for so long denied or repressed on account of socio-political conditions. The possible re-assertion of “Andeanity” is very complex, as the case study of the “Aymaras Sin Fronteras” (Aymaras without borders movement reveals. In this movement, the territorialisation process is based on the dialectics between its rural, ethnic and mountain (Andean components.Dans un contexte latinoaméricain où les populations autochtones ont dû attendre la fin du XXème siècle pour regagner en visibilité, l’identité andine pose question. Dans cet article, l’analyse des étapes d’une mobilisation collective à base territoriale permet de suivre la  redécouverte d’un ancrage identitaire longtemps nié ou refoulé du fait des conditions socio-politiques. L’affirmation retrouvée de l’ethnicité, voire de l’« andinité » s’avère très  complexe, comme le cas étudié, l’alliance « Aymaras sin Fronteras » (Aymaras sans frontières le révèle. Dans ce cas, le processus de territorialisation se fonde sur une interaction dialectique entre ses composantes rurale, ethnique, et montagnarde (andine.

  16. Precipitation interpolation in mountainous areas

    Science.gov (United States)

    Kolberg, Sjur

    2015-04-01

    Different precipitation interpolation techniques as well as external drift covariates are tested and compared in a 26000 km2 mountainous area in Norway, using daily data from 60 stations. The main method of assessment is cross-validation. Annual precipitation in the area varies from below 500 mm to more than 2000 mm. The data were corrected for wind-driven undercatch according to operational standards. While temporal evaluation produce seemingly acceptable at-station correlation values (on average around 0.6), the average daily spatial correlation is less than 0.1. Penalising also bias, Nash-Sutcliffe R2 values are negative for spatial correspondence, and around 0.15 for temporal. Despite largely violated assumptions, plain Kriging produces better results than simple inverse distance weighting. More surprisingly, the presumably 'worst-case' benchmark of no interpolation at all, simply averaging all 60 stations for each day, actually outperformed the standard interpolation techniques. For logistic reasons, high altitudes are under-represented in the gauge network. The possible effect of this was investigated by a) fitting a precipitation lapse rate as an external drift, and b) applying a linear model of orographic enhancement (Smith and Barstad, 2004). These techniques improved the results only marginally. The gauge density in the region is one for each 433 km2; higher than the overall density of the Norwegian national network. Admittedly the cross-validation technique reduces the gauge density, still the results suggest that we are far from able to provide hydrological models with adequate data for the main driving force.

  17. The microbial ecology of permafrost

    DEFF Research Database (Denmark)

    Jansson, Janet; Tas, Neslihan

    2014-01-01

    Permafrost constitutes a major portion of the terrestrial cryosphere of the Earth and is a unique ecological niche for cold-adapted microorganisms. There is a relatively high microbial diversity in permafrost, although there is some variation in community composition across different permafrost......-gas emissions. This Review describes new data on the microbial ecology of permafrost and provides a platform for understanding microbial life strategies in frozen soil as well as the impact of climate change on permafrost microorganisms and their functional roles....

  18. Defining Disturbance for Microbial Ecology.

    Science.gov (United States)

    Plante, Craig J

    2017-08-01

    Disturbance can profoundly modify the structure of natural communities. However, microbial ecologists' concept of "disturbance" has often deviated from conventional practice. Definitions (or implicit usage) have frequently included climate change and other forms of chronic environmental stress, which contradict the macrobiologist's notion of disturbance as a discrete event that removes biomass. Physical constraints and disparate biological characteristics were compared to ask whether disturbances fundamentally differ in microbial and macroorganismal communities. A definition of "disturbance" for microbial ecologists is proposed that distinguishes from "stress" and other competing terms, and that is in accord with definitions accepted by plant and animal ecologists.

  19. A new network on mountain geomorphosites

    Science.gov (United States)

    Giusti, Christian

    2013-04-01

    Since about two decades, the value of geoheritage in mountain areas has been re-discovered in various parts of the Alps (Reynard et al., 2010) and other mountain ranges, and various initiatives (protection of sites worthy of protection, inventories of geomorphosites, geotourist promotion, creation of geoparks, etc.) to conserve or promote mountain geoheritage have been developed. As mountains are recognized as natural areas with a very high geodiversity, and at the same time as areas with a great potential for the development of soft tourism, a new Network on Mountain Geomorphosites was created in October 2012 in conclusion to a workshop organized by the University of Lausanne (Switzerland). The Network is open to all researchers active in geoheritage, geoconservation and geotourism studies in mountain areas. For the first years research will focus on three main issues: - Geoheritage and natural processes: Mountains are very sensitive areas where climate change impacts are very acute and where active geomorphological processes rapidly modify landscapes. It is hypothesized that geoheritage will be highly impacted by global change in the future. Nevertheless, at the moment, very little research is carried out on the evolution of landforms recognized as geoheritage and no specific management measures have been developed. Also, the tourist activities related to geoheritage, especially the trails developed to visit geomorphosites, are sensitive to geomorphological processes in mountain areas in a context of global change, and need, therefore, to be better addressed by geomorphologists. - Geotourism: During the last two decades numerous initiatives have developed geotourism in mountain areas. Nevertheless, studies addressing issues such as the needs of the potential public(s) of geotourism, the evaluation of the quality of the geotourist products developed by scientists and/or local authorities, and the assessment of the economic benefits of geotourism for the regional

  20. Mineralogical Control on Microbial Diversity in a Weathered Granite?

    Science.gov (United States)

    Gleeson, D.; Clipson, N.; McDermott, F.

    2003-12-01

    Mineral transformation reactions and the behaviour of metals in rock and soils are affected not only by physicochemical parameters but also by biological factors, particularly by microbial activity. Microbes inhabit a wide range of niches in surface and subsurface environments, with mineral-microbe interactions being generally poorly understood. The focus of this study is to elucidate the role of microbial activity in the weathering of common silicate minerals in granitic rocks. A site in the Wicklow Mountains (Ireland) has been identified that consists of an outcrop surface of Caledonian (ca. 400 million years old) pegmatitic granite from which large intact crystals of variably weathered muscovite, plagioclase, K-feldspar and quartz were sampled, together with whole-rock granite. Culture-based microbial approaches have been widely used to profile microbial communities, particularly from copiotrophic environments, but it is now well established that for oligotrophic environments such as those that would be expected on weathering faces, perhaps less than 1% of microbial diversity can be profiled by cultural means. A number of culture-independent molecular based approaches have been developed to profile microbial diversity and community structure. These rely on successfully isolating environmental DNA from a given environment, followed by the use of the polymerase chain reaction (PCR) to amplify the typically small quantities of extracted DNA. Amplified DNA can then be analysed using cloning based approaches as well as community fingerprinting systems such as denaturing gradient gel electrophoresis (DGGE), terminal restriction fragment length polymorphism (TRFLP) and ribosomal intergenic spacer analysis (RISA). Community DNA was extracted and the intergenic spacer region (ITS) between small (16S) and large (23S) bacterial subunit rRNA genes was amplified. RISA fragments were then electrophoresed on a non-denaturing polyacrylamide gel. Banding patterns suggest that

  1. Microbial ecology-based engineering of Microbial Electrochemical Technologies.

    Science.gov (United States)

    Koch, Christin; Korth, Benjamin; Harnisch, Falk

    2018-01-01

    Microbial ecology is devoted to the understanding of dynamics, activity and interaction of microorganisms in natural and technical ecosystems. Bioelectrochemical systems represent important technical ecosystems, where microbial ecology is of highest importance for their function. However, whereas aspects of, for example, materials and reactor engineering are commonly perceived as highly relevant, the study and engineering of microbial ecology are significantly underrepresented in bioelectrochemical systems. This shortfall may be assigned to a deficit on knowledge and power of these methods as well as the prerequisites for their thorough application. This article discusses not only the importance of microbial ecology for microbial electrochemical technologies but also shows which information can be derived for a knowledge-driven engineering. Instead of providing a comprehensive list of techniques from which it is hard to judge the applicability and value of information for a respective one, this review illustrates the suitability of selected techniques on a case study. Thereby, best practice for different research questions is provided and a set of key questions for experimental design, data acquisition and analysis is suggested. © 2017 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

  2. DANGERS AND SAFETY MEASURES IN A MOUNTAIN

    Directory of Open Access Journals (Sweden)

    Jovica Petković

    2013-07-01

    Full Text Available Mountaineering and everything that is connected with it is a sport with con¬tro¬lled risk. Mountaineers, alpinists, climbers, cavers and all the others who visit and sojourn in mountains are faced with many risks and dangers, which are caused by na¬ture and also by their own mistakes. The dangers in the mountains, like dangers in any other environment, are mainly predictable, so it is best to deal with them with good esti¬mation, knowledge and skill. One has to be aware of his surroundings – the moun¬tain, to respect it and to know what is dangerous and how much it is dangerous at any moment. The organization of the mountaineering expeditions and leadership per¬haps re¬present the highest level of security control. To develop skills for organizing and lead¬ing a group means to ensure the safety of the entire group – to work pre¬ven¬ti¬ve¬ly at the level of the entire group, not only at the level of an individual. The success of the enti¬re group as well as safety depends on the organization and leadership.

  3. Land-use induced dynamics of C, N and P in mountain soils of South Ecuador

    Science.gov (United States)

    Hamer, U.; Potthast, K.; Makeschin, F.

    2009-04-01

    The mountain rainforest region in South Ecuador is characterised by sites subjected to forest clearing by slash burn for pasture production. Repeated burning of pastures is a common management practice in South Ecuador. With ongoing pasture age bracken (Pteridium arachnoideum) outcompetes the pasture grass (Setaria sphacelata), pastures are abandoned and a vegetation succession develops. Along a land-use gradient (natural forest, young and old pasture, abandoned pasture with successional vegetation) the dynamics of C, N and P in the mountain soils were investigated. The study sites were located close to the "Estacion Científica San Francisco", about halfway between the province capitals Loja and Zamora, in the Cordillera Real, an eastern range of the South Ecuadorian Andes at about 2000 m above sea level. The mean annual air temperature is 15.3°C with an average annual rainfall of 2176 mm. The land-use change induced an increase of total P in the top soil (0-30 cm) of young and old pastures. An increase in SOC stocks in the top soil of the old pasture was combined with an increase in the proportion of NaOH extractable organic P. In the young pasture soil the mineralization of SOC and the amounts of microbial biomass C, N and P were highest. In 0-5 cm depth gross N mineralization and gross NH4 consumption rates were significantly higher in the young pasture compared to forest and abandoned pasture. Thus, the initial increase in microbial activity after forest to pasture conversion seems to slow down with increasing pasture age. Burning on the abandoned pasture site induced a short-term and short-lived increase in gross N mineralization rates. First results indicate that the land-use induced changes in mineralization rates were connected with changes in the microbial community structure.

  4. Mountain goat abundance and population trends in the Olympic Mountains, Washington, 2011

    Science.gov (United States)

    Jenkins, Kurt; Happe, Patricia; Griffin, Paul C.; Beirne, Katherine; Hoffman, Roger; Baccus, William

    2011-01-01

    We conducted an aerial helicopter survey between July 18 and July 25, 2011, to estimate abundance and trends of introduced mountain goats (Oreamnos americanus) in the Olympic Mountains. The survey was the first since we developed a sightability correction model in 2008, which provided the means to estimate the number of mountain goats present in the surveyed areas and not seen during the aerial surveys, and to adjust for undercounting biases. Additionally, the count was the first since recent telemetry studies revealed that the previously defined survey zone, which was delineated at lower elevations by the 1,520-meter elevation contour, did not encompass all lands used by mountain goats during summer. We redefined the lower elevation boundary of survey units before conducting the 2011 surveys in an effort to more accurately estimate the entire mountain goat population. We surveyed 39 survey units, comprising 39 percent of the 59,615-hectare survey area. We estimated a mountain goat population of 344±44 (standard error, SE) in the expanded survey area. Based on this level of estimation uncertainty, the 95-percent confidence interval ranged from 258 to 430 mountain goats at the time of the survey. To permit comparisons of mountain goat populations between the 2004 and 2011 surveys, we recomputed population estimates derived from the 2004 survey using the newly developed bias correction methods, and we computed the 2004 and 2011 surveys based on comparable survey zone definitions (for example, using the boundaries of the 2004 survey). The recomputed estimates of mountain goat populations were 217±19 (SE) in 2004 and 303±41(SE) in 2011. The difference between the current 2011 population estimate (344±44[SE]) and the recomputed 2011 estimate (303±41[SE]) reflects the number of mountain goats counted in the expanded lower elevation portions of the survey zone added in 2011. We conclude that the population of mountain goats has increased in the Olympic Mountains at

  5. Microbial Cell Imaging

    Energy Technology Data Exchange (ETDEWEB)

    Doktycz, Mitchel John [ORNL; Sullivan, Claretta [Eastern Virginia Medical School; Mortensen, Ninell P [ORNL; Allison, David P [ORNL

    2011-01-01

    limitation on the maximum scan size (roughly 100 x 100 {mu}m) and the restricted movement of the cantilever in the Z (or height) direction. In most commercial AFMs, the Z range is restricted to roughly 10 {mu}m such that the height of cells to be imaged must be seriously considered. Nevertheless, AFM can provide structural-functional information at nanometer resolution and do so in physiologically relevant environments. Further, instrumentation for scanning probe microscopy continues to advance. Systems for high-speed imaging are becoming available, and techniques for looking inside the cells are being demonstrated. The ability to combine AFM with other imaging modalities is likely to have an even greater impact on microbiological studies. AFM studies of intact microbial cells started to appear in the literature in the 1990s. For example, AFM studies of Saccharomyces cerevisiae examined buddings cars after cell division and detailed changes related to cell growth processes. Also, the first AFM studies of bacterial biofilms appeared. In the late 1990s, AFM studies of intact fungal spores described clear changes in spore surfaces upon germination, and studies of individual bacterial cells were also described. These early bacterial imaging studies examined changes in bacterial morphology due to antimicrobial peptides exposure and bacterial adhesion properties. The majority of these early studies were carried out on dried samples and took advantage of the resolving power of AFM. The lack of cell mounting procedures presented an impediment for cell imaging studies. Subsequently, several approaches to mounting microbial cells have been developed, and these techniques are described later. Also highlighted are general considerations for microbial imaging and a description of some of the various applications of AFM to microbiology.

  6. Winter ecology of a subalpine grassland: Effects of snow removal on soil respiration, microbial structure and function.

    Science.gov (United States)

    Gavazov, Konstantin; Ingrisch, Johannes; Hasibeder, Roland; Mills, Robert T E; Buttler, Alexandre; Gleixner, Gerd; Pumpanen, Jukka; Bahn, Michael

    2017-07-15

    Seasonal snow cover provides essential insulation for mountain ecosystems, but expected changes in precipitation patterns and snow cover duration due to global warming can influence the activity of soil microbial communities. In turn, these changes have the potential to create new dynamics of soil organic matter cycling. To assess the effects of experimental snow removal and advanced spring conditions on soil carbon (C) and nitrogen (N) dynamics, and on the biomass and structure of soil microbial communities, we performed an in situ study in a subalpine grassland in the Austrian Alps, in conjunction with soil incubations under controlled conditions. We found substantial winter C-mineralisation and high accumulation of inorganic and organic N in the topsoil, peaking at snowmelt. Soil microbial biomass doubled under the snow, paralleled by a fivefold increase in its C:N ratio, but no apparent change in its bacteria-dominated community structure. Snow removal led to a series of mild freeze-thaw cycles, which had minor effects on in situ soil CO 2 production and N mineralisation. Incubated soil under advanced spring conditions, however, revealed an impaired microbial metabolism shortly after snow removal, characterised by a limited capacity for C-mineralisation of both fresh plant-derived substrates and existing soil organic matter (SOM), leading to reduced priming effects. This effect was transient and the observed recovery in microbial respiration and SOM priming towards the end of the winter season indicated microbial resilience to short-lived freeze-thaw disturbance under field conditions. Bacteria showed a higher potential for uptake of plant-derived C substrates during this recovery phase. The observed temporary loss in microbial C-mineralisation capacity and the promotion of bacteria over fungi can likely impede winter SOM cycling in mountain grasslands under recurrent winter climate change events, with plausible implications for soil nutrient availability and

  7. MICROBIAL MATS - A JOINT VENTURE

    NARCIS (Netherlands)

    VANGEMERDEN, H

    Microbial mats characteristically are dominated by a few functional groups of microbes: cyanobacteria, colorless sulfur bacteria, purple sulfur bacteria, and sulfate-reducing bacteria. Their combined metabolic activities result in steep environmental microgradients, particularly of oxygen and

  8. Microbial production of gaseous hydrocarbons

    Energy Technology Data Exchange (ETDEWEB)

    Fukuda, Hideo

    1987-10-20

    Microbial production of ethylene, isobutane and a saturated gaseous hydrocarbon mixture was described. Microbial ethylene production was studied with Penicillium digitatum IFO 9372 and a novel pathway of the ethylene biosynthesis through alpha-ketoglutarate was proposed. Rhodotorula minuta IFO 1102 was selected for the microbial production of isobutane and the interesting actions of L-leucine and L-phenylalanine for the isobutane production were found. It was finally presented about the microbial production of a saturated gaseous hydrocarbon mixture with Rhizopus japonicus IFO 4758 was described. A gas mixture was produced through a chemical reaction of SH compounds and some cellular component such as squalene under aerobic conditions. (4 figs, 7 tabs, 41 refs)

  9. Seasonality in ocean microbial communities.

    Science.gov (United States)

    Giovannoni, Stephen J; Vergin, Kevin L

    2012-02-10

    Ocean warming occurs every year in seasonal cycles that can help us to understand long-term responses of plankton to climate change. Rhythmic seasonal patterns of microbial community turnover are revealed when high-resolution measurements of microbial plankton diversity are applied to samples collected in lengthy time series. Seasonal cycles in microbial plankton are complex, but the expansion of fixed ocean stations monitoring long-term change and the development of automated instrumentation are providing the time-series data needed to understand how these cycles vary across broad geographical scales. By accumulating data and using predictive modeling, we gain insights into changes that will occur as the ocean surface continues to warm and as the extent and duration of ocean stratification increase. These developments will enable marine scientists to predict changes in geochemical cycles mediated by microbial communities and to gauge their broader impacts.

  10. Microbial safety of foods

    International Nuclear Information System (INIS)

    Bandekar, J.R.

    2013-01-01

    Despite advances in hygiene, consumer knowledge and food treatment and processing, food-borne diseases have become one of the most widespread public health problems in the world to-day. About two thirds of all outbreaks are traced to microbial contaminated food - one of the most hazardous being Clostridium botulinum, E. coli 0157: H7 and Salmonella. The pathogens can be introduced in the food products anywhere in the food chain and hence it is of prime important to have microbial vigilance in the entire food chain. WHO estimates that food-borne and water-borne diarrhoeal diseases taken together kill about 2.2 million people annually. The infants, children, elderly and immune-compromised people are particularly susceptible to food-borne diseases. Unsafe food causes many acute and life-long diseases, ranging from diarrhoeal diseases to various forms of cancer. A number of factors such as emergence of new food-borne pathogens, development of drug resistance in the pathogens, changing life style, global trade of food etc. are responsible for the continued persistence of food-borne diseases. Due to consumer demand, a number of Ready-To-Eat (RTE) minimally processed foods are increasingly marketed. However, there is increased risk of food-borne diseases with these products. The food-borne disease outbreaks due to E. coli O157:H7, Listeria monocytogenes, Salmonella and Campylobacter are responsible for recall of many foods resulting in heavy losses to food industry. The development of multi drug resistant pathogens due to indiscriminate use of antibiotics is also a major problem. Food Technology Division of Bhabha Atomic Research Centre has been working on food-borne bacterial pathogens particularly Salmonella, Campylobacter, Vibrio and Aeromonas species, their prevalence in export quality seafood as well in foods sold in retail market such as poultry, fish, sprouts and salads. These pathogens from Indian foods have been characterized for the presence of virulence genes

  11. Microbially mediated mineral carbonation

    Science.gov (United States)

    Power, I. M.; Wilson, S. A.; Dipple, G. M.; Southam, G.

    2010-12-01

    Mineral carbonation involves silicate dissolution and carbonate precipitation, which are both natural processes that microorganisms are able to mediate in near surface environments (Ferris et al., 1994; Eq. 1). (Ca,Mg)SiO3 + 2H2CO3 + H2O → (Ca,Mg)CO3 + H2O + H4SiO4 + O2 (1) Cyanobacteria are photoautotrophs with cell surface characteristics and metabolic processes involving inorganic carbon that can induce carbonate precipitation. This occurs partly by concentrating cations within their net-negative cell envelope and through the alkalinization of their microenvironment (Thompson & Ferris, 1990). Regions with mafic and ultramafic bedrock, such as near Atlin, British Columbia, Canada, represent the best potential sources of feedstocks for mineral carbonation. The hydromagnesite playas near Atlin are a natural biogeochemical model for the carbonation of magnesium silicate minerals (Power et al., 2009). Field-based studies at Atlin and corroborating laboratory experiments demonstrate the ability of a microbial consortium dominated by filamentous cyanobacteria to induce the precipitation of carbonate minerals. Phototrophic microbes, such as cyanobacteria, have been proposed as a means for producing biodiesel and other value added products because of their efficiency as solar collectors and low requirement for valuable, cultivable land in comparison to crops (Dismukes et al., 2008). Carbonate precipitation and biomass production could be facilitated using specifically designed ponds to collect waters rich in dissolved cations (e.g., Mg2+ and Ca2+), which would allow for evapoconcentration and provide an appropriate environment for growth of cyanobacteria. Microbially mediated carbonate precipitation does not require large quantities of energy or chemicals needed for industrial systems that have been proposed for rapid carbon capture and storage via mineral carbonation (e.g., Lackner et al., 1995). Therefore, this biogeochemical approach may represent a readily

  12. Contaminant immobilization via microbial activity

    International Nuclear Information System (INIS)

    1991-11-01

    The aim of this study was to search the literature to identify biological techniques that could be applied to the restoration of contaminated groundwaters near uranium milling sites. Through bioremediation it was hypothesized that the hazardous heavy metals could be immobilized in a stable, low-solubility form, thereby halting their progress in the migrating groundwater. Three basic mechanisms were examined: reduction of heavy metals by microbially produced hydrogen sulfide; direct microbial mediated reduction; and biosorption

  13. Microbial genomes: Blueprints for life

    Energy Technology Data Exchange (ETDEWEB)

    Relman, David A.; Strauss, Evelyn

    2000-12-31

    Complete microbial genome sequences hold the promise of profound new insights into microbial pathogenesis, evolution, diagnostics, and therapeutics. From these insights will come a new foundation for understanding the evolution of single-celled life, as well as the evolution of more complex life forms. This report is an in-depth analysis of scientific issues that provides recommendations and will be widely disseminated to the scientific community, federal agencies, industry and the public.

  14. Chronic alcoholism and microbial keratitis.

    OpenAIRE

    Ormerod, L. D.; Gomez, D. S.; Schanzlin, D. J.; Smith, R. E.

    1988-01-01

    In a series of 227 consecutive, non-referred patients with microbial keratitis an analysis of the accumulated hospital records showed that one-third were associated with chronic alcoholism. The diagnosis of alcoholism was usually unsuspected on admission to hospital. The microbial pathogenesis in these patients was distinctive; coagulase-negative staphylococci, alpha- and beta-streptococci, moraxellae, enteric Gram-negative bacilli, and polymicrobial infections were unusually prominent. Pseud...

  15. Wildfires in Siberian Mountain Forest

    Science.gov (United States)

    Kharuk, V.; Ponomarev, E. I.; Antamoshkina, O.

    2017-12-01

    The annual burned area in Russia was estimated as 0.55 to 20 Mha with >70% occurred in Siberia. We analyzed Siberian wildfires distribution with respect to elevation, slope steepness and exposure. In addition, wildfires temporal dynamic and latitudinal range were analyzed. We used daily thermal anomalies derived from NOAA/AVHRR and Terra/MODIS satellites (1990-2016). Fire return intervals were (FRI) calculated based on the dendrochronology analysis of samples taken from trees with burn marks. Spatial distribution of wildfires dependent on topo features: relative burned area increase with elevation increase (ca. 1100 m), switching to following decrease. The wildfires frequency exponentially decreased within lowlands - highlands transition. Burned area is increasing with slope steepness increase (up to 5-10°). Fire return intervals (FRI) on the southfacing slopes are about 30% longer than on the north facing. Wildfire re-occurrence is decreasing exponentially: 90% of burns were caused by single fires, 8.5% by double fires, 1% burned three times, and on about 0.05% territory wildfires occurred four times (observed period: 75 yr.). Wildfires area and number, as well as FRI, also dependent on latitude: relative burned area increasing exponentially in norward direction, whereas relative fire number is exponentially decreasing. FRI increases in the northward direction: from 80 years at 62°N to 200 years at the Arctic Circle, and to 300 years at the northern limit of closed forests ( 71+°N). Fire frequency, fire danger period and FRI are strongly correlated with incoming solar radiation (r = 0.81 - 0.95). In 21-s century, a positive trend of wildfires number and area observed in mountain areas in all Siberia. Thus, burned area and number of fires in Siberia are significantly increased since 1990th (R2 =0.47, R2 =0.69, respectively), and that increase correlated with air temperatures and climate aridity increases. However, wildfires are essential for supporting fire

  16. Periurban landscapes in mountain areas

    Directory of Open Access Journals (Sweden)

    Nathalie Bertrand

    2009-06-01

    Full Text Available Les mutations des paysages régionaux dues aux pressions urbaines questionnent l’usage du sol. Elles interpellent à la fois des enjeux économiques, sociaux et environnementaux voire spatiaux sous-tendus par l’étalement urbain, l’accroissement des déplacements domicile-travail, le mitage de l’espace. Ces évolutions et dysfonctionnements renvoient à la question de la durabilité du développement des régions, et particulièrement des Alpes, espace contraint géographiquement et objet de nombreuses pressions anthropiques et riche en biotopes remarquables. Cet article est basé sur deux ans de travaux menés par des socio-économistes et des écologues sur les effets sur le paysage et l’environnement de la périurbanisation d’un massif alpin. Nous avons pris en compte l’espace dans les processus environnementaux, économiques ou sociaux. Intrinsèque dans les analyses écologiques, elle a longtemps posé problème à l’économie pour intégrer l’espace comme dimension à part entière des processus économiques. Trois thèmes sont ici développés : l’approche du point de vue du paysage, les problèmes d’échelles spatiales et temporelles, le choix d’indicateurs. Ils demandent de hiérarchiser les questions et de pratiquer le travail en commun. Aller au-delà nécessite de développer une interrogation plus écologique ou plus économique et/ou sociale en quittant de ce fait l’interface pour favoriser des interrogations disciplinaires particulières.Changes in regional landscapes due to urban pressures raise questions regarding land use. They also give rise to economic, social and environmental issues related to urban sprawl, increases in daily commuting, and land consumption. These changes and dysfunctions are ultimately underpinned by the question of sustainable regional development. Mountain regions such as the Alps, with their various outstanding biotopes in a restricted space, are particularly vulnerable.

  17. Yucca Mountain biological resources monitoring program

    International Nuclear Information System (INIS)

    1993-02-01

    The US Department of Energy (DOE) is required by the Nuclear Waste Policy Act of 1982 (as amended in 1987) to study and characterize Yucca Mountain as a potential site for a geologic repository for high-level nuclear waste. During site characterization, the DOE will conduct a variety of geotechnical, geochemical, geological, and hydrological studies to determine the suitability of Yucca Mountain as a potential repository. To ensure that site characterization activities (SCA) do not adversely affect the environment at Yucca Mountain, an environmental program has been implemented to monitor and mitigate potential impacts and ensure activities comply with applicable environmental regulations. This report describes the activities and accomplishments of EG ampersand G Energy Measurements, Inc. (EG ampersand G/EM) during fiscal year 1992 (FY92) for six program areas within the Terrestrial Ecosystem component of the YMP environmental program. The six program areas are Site Characterization Effects, Desert Tortoises, Habitat Reclamation, Monitoring and Mitigation, Radiological Monitoring, and Biological Support

  18. Yucca Mountain Biological Resources Monitoring Program

    International Nuclear Information System (INIS)

    1992-01-01

    The US Department of Energy (DOE) is required by the Nuclear Waste Policy Act of 1982 (as amended in 1987) to study and characterize Yucca Mountain as a possible site for a geologic repository for high-level nuclear waste. During site characterization, the DOE will conduct a variety of geotechnical, geochemical, geological, and hydrological studies to determine the suitability of Yucca Mountain as a repository. To ensure that site characterization activities (SCA) do not adversely affect the Yucca Mountain area, an environmental program has been implemented to monitor and mitigate potential impacts and to ensure that activities comply with applicable environmental regulations. This report describes the activities and accomplishments during fiscal year 1991 (FY91) for six program areas within the Terrestrial Ecosystem component of the YMP environmental program. The six program areas are Site Characterization Activities Effects, Desert Tortoises, Habitat Reclamation, Monitoring and Mitigation, Radiological Monitoring, and Biological Support

  19. Mechanical excavator performance in Yucca Mountain tuffs

    International Nuclear Information System (INIS)

    Ozdemir, L.; Hansen, F.D.

    1991-01-01

    A research effort of four phases is in progress at the Colorado School of Mines. The overall program will evaluate the cutability of welded tuff and other lithologies likely to be excavated at Yucca Mountain in the site characterization process. Several mechanical systems are considered with emphasis given to the tunnel boring machine. The research comprises laboratory testing, linear drag bit and disc cutter tests and potentially large-scale laboratory demonstrations to support potential use of a tunnel boring machine in welded tuff. Preliminary estimates of mechanical excavator performance in Yucca Mountain tuff are presented here. As phases of the research project are completed, well quantified estimates will be made of performance of mechanical excavators in the Yucca Mountain tuffs. 3 refs., 2 tabs

  20. Yucca Mountain Biological resources monitoring program

    International Nuclear Information System (INIS)

    1991-01-01

    The US Department of Energy (US DOE) is required by the Nuclear Waste Policy Act of 1982 (as amended in 1987) to study and characterize Yucca Mountain as a possible site for a geological repository for high-level radioactive waste. To ensure site characterization activities do not adversely affect the Yucca Mountain area, an environmental program, the Yucca Mountain Biological Resources Monitoring Program, has been implemented monitor and mitigate environmental impacts and to ensure activities comply with applicable environmental laws. Potential impacts to vegetation, small mammals, and the desert tortoise (an indigenous threatened species) are addressed, as are habitat reclamation, radiological monitoring, and compilation of baseline data. This report describes the program in Fiscal Years 1989 and 1990. 12 refs., 4 figs., 17 tabs

  1. Mechanical excavator performance in Yucca Mountain tuffs

    International Nuclear Information System (INIS)

    Ozdemir, L.; Hansen, F.D.

    1991-01-01

    A research effort of four phases is in progress at the Colorado School of Mines. The overall program will evaluate the cutability of welded tuff and other lithologies likely to be excavated at Yucca Mountain in the site characterization process. Several mechanical systems are considered with emphasis given to the tunnel boring machine. The research comprises laboratory testing, linear drag bit and disc cutter tests, and potentially large-scale lab. demonstrations to support potential use of a tunnel boring machine in welded tuff. Preliminary estimates of mechanical excavator performance in Yucca Mountain tuff are presented here. As phases of the research project are completed, well-quantified estimates will be made of performance of mechanical excavators in the Yucca Mountain tuffs

  2. A case of Rocky Mountain spotted fever.

    Science.gov (United States)

    Rubel, Barry S

    2007-01-01

    Rocky Mountain spotted fever is a serious, generalized infection that is spread to humans through the bite of infected ticks. It can be lethal but it is curable. The disease gets its name from the Rocky Mountain region where it was first identified in 1896. The fever is caused by the bacterium Rickettsia rickettsii and is maintained in nature in a complex life cycle involving ticks and mammals. Humans are considered to be accidental hosts and are not involved in the natural transmission cycle of this pathogen. The author examined a 47-year-old woman during a periodic recall appointment. The patient had no dental problems other than the need for routine prophylaxis but mentioned a recent problem with swelling of her extremities with an accompanying rash and general malaise and soreness in her neck region. Tests were conducted and a diagnosis of Rocky Mountain spotted fever was made.

  3. Nitrogen cycling responses to mountain pine beetle disturbance in a high elevation whitebark pine ecosystem.

    Science.gov (United States)

    Keville, Megan P; Reed, Sasha C; Cleveland, Cory C

    2013-01-01

    Ecological disturbances can significantly affect biogeochemical cycles in terrestrial ecosystems, but the biogeochemical consequences of the extensive mountain pine beetle outbreak in high elevation whitebark pine (WbP) (Pinus albicaulis) ecosystems of western North America have not been previously investigated. Mountain pine beetle attack has driven widespread WbP mortality, which could drive shifts in both the pools and fluxes of nitrogen (N) within these ecosystems. Because N availability can limit forest regrowth, understanding how beetle-induced mortality affects N cycling in WbP stands may be critical to understanding the trajectory of ecosystem recovery. Thus, we measured above- and belowground N pools and fluxes for trees representing three different times since beetle attack, including unattacked trees. Litterfall N inputs were more than ten times higher under recently attacked trees compared to unattacked trees. Soil inorganic N concentrations also increased following beetle attack, potentially driven by a more than two-fold increase in ammonium (NH₄⁺) concentrations in the surface soil organic horizon. However, there were no significant differences in mineral soil inorganic N or soil microbial biomass N concentrations between attacked and unattacked trees, implying that short-term changes in N cycling in response to the initial stages of WbP attack were restricted to the organic horizon. Our results suggest that while mountain pine beetle attack drives a pulse of N from the canopy to the forest floor, changes in litterfall quality and quantity do not have profound effects on soil biogeochemical cycling, at least in the short-term. However, continuous observation of these important ecosystems will be crucial to determining the long-term biogeochemical effects of mountain pine beetle outbreaks.

  4. Nitrogen cycling responses to mountain pine beetle disturbance in a high elevation whitebark pine ecosystem

    Science.gov (United States)

    Keville, Megan P.; Reed, Sasha C.; Cleveland, Cory C.

    2013-01-01

    Ecological disturbances can significantly affect biogeochemical cycles in terrestrial ecosystems, but the biogeochemical consequences of the extensive mountain pine beetle outbreak in high elevation whitebark pine (WbP) (Pinus albicaulis) ecosystems of western North America have not been previously investigated. Mountain pine beetle attack has driven widespread WbP mortality, which could drive shifts in both the pools and fluxes of nitrogen (N) within these ecosystems. Because N availability can limit forest regrowth, understanding how beetle-induced mortality affects N cycling in WbP stands may be critical to understanding the trajectory of ecosystem recovery. Thus, we measured above- and belowground N pools and fluxes for trees representing three different times since beetle attack, including unattacked trees. Litterfall N inputs were more than ten times higher under recently attacked trees compared to unattacked trees. Soil inorganic N concentrations also increased following beetle attack, potentially driven by a more than two-fold increase in ammonium (NH4+) concentrations in the surface soil organic horizon. However, there were no significant differences in mineral soil inorganic N or soil microbial biomass N concentrations between attacked and unattacked trees, implying that short-term changes in N cycling in response to the initial stages of WbP attack were restricted to the organic horizon. Our results suggest that while mountain pine beetle attack drives a pulse of N from the canopy to the forest floor, changes in litterfall quality and quantity do not have profound effects on soil biogeochemical cycling, at least in the short-term. However, continuous observation of these important ecosystems will be crucial to determining the long-term biogeochemical effects of mountain pine beetle outbreaks.

  5. In-Drift Microbial Communities

    Energy Technology Data Exchange (ETDEWEB)

    D. Jolley

    2000-11-09

    As directed by written work direction (CRWMS M and O 1999f), Performance Assessment (PA) developed a model for microbial communities in the engineered barrier system (EBS) as documented here. The purpose of this model is to assist Performance Assessment and its Engineered Barrier Performance Section in modeling the geochemical environment within a potential repository drift for TSPA-SR/LA, thus allowing PA to provide a more detailed and complete near-field geochemical model and to answer the key technical issues (KTI) raised in the NRC Issue Resolution Status Report (IRSR) for the Evolution of the Near Field Environment (NFE) Revision 2 (NRC 1999). This model and its predecessor (the in-drift microbial communities model as documented in Chapter 4 of the TSPA-VA Technical Basis Document, CRWMS M and O 1998a) was developed to respond to the applicable KTIs. Additionally, because of the previous development of the in-drift microbial communities model as documented in Chapter 4 of the TSPA-VA Technical Basis Document (CRWMS M and O 1998a), the M and O was effectively able to resolve a previous KTI concern regarding the effects of microbial processes on seepage and flow (NRC 1998). This document supercedes the in-drift microbial communities model as documented in Chapter 4 of the TSPA-VA Technical Basis Document (CRWMS M and O 1998a). This document provides the conceptual framework of the revised in-drift microbial communities model to be used in subsequent performance assessment (PA) analyses.

  6. In-Drift Microbial Communities

    International Nuclear Information System (INIS)

    Jolley, D.

    2000-01-01

    As directed by written work direction (CRWMS M and O 1999f), Performance Assessment (PA) developed a model for microbial communities in the engineered barrier system (EBS) as documented here. The purpose of this model is to assist Performance Assessment and its Engineered Barrier Performance Section in modeling the geochemical environment within a potential repository drift for TSPA-SR/LA, thus allowing PA to provide a more detailed and complete near-field geochemical model and to answer the key technical issues (KTI) raised in the NRC Issue Resolution Status Report (IRSR) for the Evolution of the Near Field Environment (NFE) Revision 2 (NRC 1999). This model and its predecessor (the in-drift microbial communities model as documented in Chapter 4 of the TSPA-VA Technical Basis Document, CRWMS M and O 1998a) was developed to respond to the applicable KTIs. Additionally, because of the previous development of the in-drift microbial communities model as documented in Chapter 4 of the TSPA-VA Technical Basis Document (CRWMS M and O 1998a), the M and O was effectively able to resolve a previous KTI concern regarding the effects of microbial processes on seepage and flow (NRC 1998). This document supercedes the in-drift microbial communities model as documented in Chapter 4 of the TSPA-VA Technical Basis Document (CRWMS M and O 1998a). This document provides the conceptual framework of the revised in-drift microbial communities model to be used in subsequent performance assessment (PA) analyses

  7. Microbial production of biovanillin

    Directory of Open Access Journals (Sweden)

    A. Converti

    2010-10-01

    Full Text Available This review aims at providing an overview on the microbial production of vanillin, a new alternative method for the production of this important flavor of the food industry, which has the potential to become economically competitive in the next future. After a brief description of the applications of vanillin in different industrial sectors and of its physicochemical properties, we described the traditional ways of providing vanillin, specifically extraction and chemical synthesis (mainly oxidation and compared them with the new biotechnological options, i.e., biotransformations of caffeic acid, veratraldehyde and mainly ferulic acid. In the second part of the review, emphasis has been addressed to the factors most influencing the bioproduction of vanillin, specifically the age of inoculum, pH, temperature, type of co-substrate, as well as the inhibitory effects exerted either by excess substrate or product. The final part of the work summarized the downstream processes and the related unit operations involved in the recovery of vanillin from the bioconversion medium.

  8. Microbial production of biovanillin.

    Science.gov (United States)

    Converti, A; Aliakbarian, B; Domínguez, J M; Bustos Vázquez, G; Perego, P

    2010-07-01

    This review aims at providing an overview on the microbial production of vanillin, a new alternative method for the production of this important flavor of the food industry, which has the potential to become economically competitive in the next future. After a brief description of the applications of vanillin in different industrial sectors and of its physicochemical properties, we described the traditional ways of providing vanillin, specifically extraction and chemical synthesis (mainly oxidation) and compared them with the new biotechnological options, i.e., biotransformations of caffeic acid, veratraldehyde and mainly ferulic acid. In the second part of the review, emphasis has been addressed to the factors most influencing the bioproduction of vanillin, specifically the age of inoculum, pH, temperature, type of co-substrate, as well as the inhibitory effects exerted either by excess substrate or product. The final part of the work summarized the downstream processes and the related unit operations involved in the recovery of vanillin from the bioconversion medium.

  9. Microbial Propionic Acid Production

    Directory of Open Access Journals (Sweden)

    R. Axayacatl Gonzalez-Garcia

    2017-05-01

    Full Text Available Propionic acid (propionate is a commercially valuable carboxylic acid produced through microbial fermentation. Propionic acid is mainly used in the food industry but has recently found applications in the cosmetic, plastics and pharmaceutical industries. Propionate can be produced via various metabolic pathways, which can be classified into three major groups: fermentative pathways, biosynthetic pathways, and amino acid catabolic pathways. The current review provides an in-depth description of the major metabolic routes for propionate production from an energy optimization perspective. Biological propionate production is limited by high downstream purification costs which can be addressed if the target yield, productivity and titre can be achieved. Genome shuffling combined with high throughput omics and metabolic engineering is providing new opportunities, and biological propionate production is likely to enter the market in the not so distant future. In order to realise the full potential of metabolic engineering and heterologous expression, however, a greater understanding of metabolic capabilities of the native producers, the fittest producers, is required.

  10. Phospholipid fatty acid analysis as part of the Yucca Mountain Project. Final report

    International Nuclear Information System (INIS)

    Ringelberg, D.B.; White, D.C.

    1996-01-01

    In support of the Yucca Mountain subsurface microbial characterization project phospholipid fatty acid (PLFA) analyses for viable microbial biomass, community composition and nutritional status were performed. Results showed a positive correlation between a decrease in viable biomass and increase in depth with the lowest biomass values being obtained from the Topopah Spring geologic horizon. A plot of the ratio of non-viable (diglyceride fatty acids) to viable (PLFA) cells also showed the lowest values to derive from the Topopah Spring horizon. Estimations of microbial community composition, made from the patterns of PLFA recovered from the sediment samples, revealed similarities between samples collected within the same geologic horizons: Tiva Canyon, Pre-Pah Canyon and Topopah Spring. Results indicated the presence of mixed communities composed of gram positive, gram negative, actinomycete and obligate anaerobic bacteria. Culturable organisms, recovered from similar sediments, were representative of the same bacterial classifications although gram positive bacterial isolates typically outnumbered gram negative isolates. Within the gram negative bacterial community, corroborative indicators of physiological stress were apparent in the Topopah Spring horizon

  11. Nuclear waste disposal: Gambling on Yucca Mountain

    International Nuclear Information System (INIS)

    Ginsburg, S.

    1995-01-01

    This document describes the historical aspects of nuclear energy ,nuclear weapons usage, and development of the nuclear bureaucracy in the United States, and discusses the selection and siting of Yucca Mountain, Nevada for a federal nuclear waste repository. Litigation regarding the site selection and resulting battles in the political arena and in the Nevada State Legislature are also presented. Alternative radioactive waste disposal options, risk assessments of the Yucca Mountain site, and logistics regarding the transportation and storage of nuclear waste are also presented. This document also contains an extensive bibliography

  12. The mountains influence on Turkey Climate

    International Nuclear Information System (INIS)

    Sensoy, Serhat

    2004-01-01

    Since the Black sea mountains at the north of the country and the Taurus mountains in the south lay parallel to the seashore and rise very sharply rain clouds can not penetrate to the internal part of the country. Rain clouds drops most of their water on the slopes opposite the sea. As rain clouds pass over the mountains and reach Central Anatolia they have no significant capability of rain. For this reason, the Central Anatolia does not have very much precipitation. The difference between the rates of precipitation on the inner and outer slopes seems to be effective on the expansion of plants. For example, there is a subtropical climate prevailing on the Black sea shore between Sinop and Batum where precipitation is more than 1000-2000 mm yearly. Going from Sinop to the mouth of the Sakarya River the rate of precipitation goes down to 800-1250 mm in a year. Running from the Sakarya River to the western area covering Thrace the climate seems to be continental, and in the area dominant plant cover is of the Mediterranean type. Since the succession of the mountains in Western Anatolia lay perpendicular to the seashore, rain clouds penetrate towards the inner regions for about 400 km. The continental climate with long, dry and summer affects this area. In the Eastern region of Anatolia, since the elevation of the mountains exceeds 2500-3000 m, valleys are disorderly scattered and located at high elevations, and the northern Black sea mountains and Caucasian mountains hold the rain clouds, the area is effected by the continental climate with long and very cold winters. Consequently precipitation at the lgdir River goes down to 300 mm while it is 500-800 mm in most of areas and 1000-1500 mm in some regions towards northern Mu and Bingol provinces. As mentioned above, high mountains, which hold rain clouds, surround the Central Anatolia, which has caused drought in this region. In the central Anatolia covering Afyon, Eski hir, Ankara, Qankiri, Qorum, Amasya, Kayseri

  13. Succession status on mountain farms in Slovenia

    Directory of Open Access Journals (Sweden)

    Boštjan Kerbler-Kefo

    2008-12-01

    Full Text Available This paper is based on the hypothesis that the offi cial statistical data does not refl ect actual succession status on mountain farms in Slovenia and also on Slovene farms in general, since the census criteria defi ning succession are still incomplete. With the purpose of confi rming our assumption, we formulated more accurate criteria and also determined as to what is the real status of succession on mountain farms in Slovenia. It has proved to be more favourable, than it is presented by the offi cial statistics.

  14. Risk management among mountain bikers in selected clubs in ...

    African Journals Online (AJOL)

    Risk management among mountain bikers in selected clubs in Malaysia. ... Journal of Fundamental and Applied Sciences. Journal Home · ABOUT ... is more risky. Keywords: mountain biking, risk management, event management, Malaysia ...

  15. MOUNTAIN TOURISM INTERCONNECTIONS. VARIATION OF MOUNTAIN TOURIST FLOW IN SUCEAVA COUNTY

    Directory of Open Access Journals (Sweden)

    George CHEIA

    2013-12-01

    Full Text Available Mountain tourism, in addition to one of the most common types of tourism, is generated by a complex of factors and at the same time, triggers a series of processes involving tourism phenomenon, especially the environment where it is taking place. This paper aims to discuss some of these causal factors, and the relationship between this type of tourism and the tourist area itself (1. By using SPSS analytical methods , it can be practically demonstrated the impact of mountain tourist flow in spas (2 and mountain resorts (3 in Suceava county.

  16. [Effects of altitudes on soil microbial biomass and enzyme activity in alpine-gorge regions.

    Science.gov (United States)

    Cao, Rui; Wu, Fu Zhong; Yang, Wan Qin; Xu, Zhen Feng; Tani, Bo; Wang, Bin; Li, Jun; Chang, Chen Hui

    2016-04-22

    In order to understand the variations of soil microbial biomass and soil enzyme activities with the change of altitude, a field incubation was conducted in dry valley, ecotone between dry valley and mountain forest, subalpine coniferous forest, alpine forest and alpine meadow from 1563 m to 3994 m of altitude in the alpine-gorge region of western Sichuan. The microbial biomass carbon and nitrogen, and the activities of invertase, urease and acid phosphorus were measured in both soil organic layer and mineral soil layer. Both the soil microbial biomass and soil enzyme activities showed the similar tendency in soil organic layer. They increased from 2158 m to 3028 m, then decreased to the lowest value at 3593 m, and thereafter increased until 3994 m in the alpine-gorge region. In contrast, the soil microbial biomass and soil enzyme activities in mineral soil layer showed the trends as, the subalpine forest at 3028 m > alpine meadow at 3994 m > montane forest ecotone at 2158 m > alpine forest at 3593 m > dry valley at 1563 m. Regardless of altitudes, soil microbial biomass and soil enzyme activities were significantly higher in soil organic layer than in mineral soil layer. The soil microbial biomass was significantly positively correlated with the activities of the measured soil enzymes. Moreover, both the soil microbial biomass and soil enzyme activities were significantly positively correlated with soil water content, organic carbon, and total nitrogen. The activity of soil invertase was significantly positively correlated with soil phosphorus content, and the soil acid phosphatase was so with soil phosphorus content and soil temperature. In brief, changes in vegetation and other environmental factors resulting from altitude change might have strong effects on soil biochemical properties in the alpine-gorge region.

  17. The Geologic Story of the Uinta Mountains

    Science.gov (United States)

    Hansen, Wallace R.

    1969-01-01

    The opening of the West after the Civil War greatly stimulated early geologic exploration west of the 100th Meridian. One of the areas first studied, the Uinta Mountains region, gained wide attention as a result of the explorations of three Territorial Surveys, one headed by John Wesley Powell, one by Clarence King, and one by Ferdinand V. Hayden. Completion of the Union Pacific Railroad across southern Wyoming 100 years ago, in 1869, materially assisted geologic exploration, and the railheads at Green River and Rock Springs greatly simplified the outfitting of expeditions into the mountains. The overlap of the Powell, King, and Hayden surveys in the Uinta Mountains led to efforts that were less concerted than competitive and not without acrimony. Many parts of the area were seen by all three parties at almost the same time. Duplication was inevitable, of course, but all three surveys contributed vast quantities of new knowledge to the storehouse of geology, and many now-basic concepts arose from their observations. Powell's area of interest extended mainly southward from the Uinta Mountains to the Grand Canyon, including the boundless plateaus and canyons of southern Utah and northern Arizona. King's survey extended eastward from the High Sierra in California to Cheyenne, Wyoming, and encompassed a swath of country more than 100 miles wide. Hayden's explorations covered an immense region of mountains and basins from Yellowstone Park in Wyoming southeast throughout most of Colorado. Powell first entered the Uinta Mountains in the fall of 1868, having traveled north around the east end of the range from the White River country to Green River, Wyoming, then south over a circuitous route to Flaming Gorge and Browns Park, and finally back to the White River, where he spent the winter. In 1869, after reexamining much of the area visited the previous season, Powell embarked on his famous 'first boat trip' down the Green and Colorado Rivers. This trip was more exploratory

  18. [Characterization and microbial community shifts of rice strawdegrading microbial consortia].

    Science.gov (United States)

    Wang, Chunfang; Ma, Shichun; Huang, Yan; Liu, Laiyan; Fan, Hui; Deng, Yu

    2016-12-04

    To study the relationship between microbial community and degradation rate of rice straw, we compared and analyzed cellulose-decomposing ability, microbial community structures and shifts of microbial consortia F1 and F2. We determined exoglucanase activity by 3, 5-dinitrosalicylic acid colorimetry. We determined content of cellulose, hemicellulose and lignin in rice straw by Van Soest method, and calculated degradation rates of rice straw by the weight changes before and after a 10-day incubation. We analyzed and compared the microbial communities and functional microbiology shifts by clone libraries, Miseq analysis and real time-PCR based on the 16S rRNA gene and cel48 genes. Total degradation rate, cellulose, and hemicellulose degradation rate of microbial consortia F1 were significantly higher than that of F2. The variation trend of exoglucanase activity in both microbial consortia F1 and F2 was consistent with that of cel48 gene copies. Microbial diversity of F1 was complex with aerobic bacteria as dominant species, whereas that of F2 was simple with a high proportion of anaerobic cellulose decomposing bacteria in the later stage of incubation. In the first 4 days, unclassified Bacillales and Bacillus were dominant in both F1 and F2. The dominant species and abundance became different after 4-day incubation, Bacteroidetes and Firmicutes were dominant phyla of F1 and F2, respectively. Although Petrimonas and Pusillimonas were common dominant species in F1 and F2, abundance of Petrimonas in F2 (38.30%) was significantly higher than that in F1 (9.47%), and the abundance of Clostridiales OPB54 in F2 increased to 14.85% after 8-day incubation. The abundance of cel48 gene related with cellulose degradation rate and exoglucanase activity, and cel48 gene has the potential as a molecular marker to monitor the process of cellulose degradation. Microbial community structure has a remarkable impact on the degradation efficiency of straw cellulose, and Petrimonas

  19. Pelagic food webs and microbial loop in low-alkalinity mountain lakes

    Czech Academy of Sciences Publication Activity Database

    Straškrábová, Viera; Šimek, Karel; Macek, Miroslav; Hartman, Petr; Fott, J.; Blazo, M.

    2000-01-01

    Roč. 27, - (2000), s. 513-516 ISSN 0368-0770 R&D Projects: GA MŠk OK 118 Grant - others:EU(XE) MOLAR ENV4-CT95-0007; EU(XE) Climate Programme - INCO Keywords : hydrology Subject RIV: DA - Hydrology ; Limnology

  20. Eastern Arc Mountains and their national and global importance ...

    African Journals Online (AJOL)

    The Eastern Arc Mountains comprise a chain of separate mountain blocks running from southern Kenya through Tanzania in a crescent or arc shape. In Tanzania, the Eastern Arc consists of North and South Pare, East and West Usambaras, Nguru, Ukaguru, Rubeho, Uluguru, Udzungwa and Mahenge Mountains.

  1. Aspen biology, community classification, and management in the Blue Mountains

    Science.gov (United States)

    David K. Swanson; Craig L. Schmitt; Diane M. Shirley; Vicky Erickson; Kenneth J. Schuetz; Michael L. Tatum; David C. Powell

    2010-01-01

    Quaking aspen (Populus tremuloides Michx.) is a valuable species that is declining in the Blue Mountains of northeastern Oregon. This publication is a compilation of over 20 years of aspen management experience by USDA Forest Service workers in the Blue Mountains. It includes a summary of aspen biology and occurrence in the Blue Mountains, and a...

  2. Phytogeography of the tropical north-east African mountains

    Directory of Open Access Journals (Sweden)

    I. Friis

    1983-11-01

    Full Text Available The tropical north-east African mountains are tentatively divided into four phytochoria, the formal rank of which is not defined. The division is based on patterns of distribution and endemism in the region. The recognition of a distinct Afromontane phytochorion is now well established (Chapman & White, 1970; Werger, 1978; White, 1978. However, there is still very little information on the phytogeography of the individual mountains or mountain systems. This study hopes to fill a little of the gap by analysing distribution patterns and patterns of endemism in the flora of the tropical north-east African mountains. The north-east African mountain system is the largest in tropical Africa (see e.g. map in White, 1978. At the core of this system is the large Ethiopian massif, around which are located various mountains and mountain chains. These include the Red Sea Hills in the Sudan, the mountain chain in northern Somalia, the south-west Arabian mountains, and the Imatong mountains of south-east Sudan. The latter are often referred to the East African mountain system (White, 1978 but. as I will point out later, they also have a close connection with the south-west highlands of Ethiopia. The paper presents some results of my study of the mountain flora of tropical north-east Africa, particularly the forest species. Where no source is indicated, the data are from my own unpublished studies.

  3. Hydrologeologic characteristics of faults at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Dickerson, Robert P.

    2001-01-01

    Yucca Mountain is under study as a potential site for underground storage of high-level radioactive waste, with the principle goal being the safe isolation of the waste from the accessible environment. This paper addresses the hydrogeologic characteristics of the fault zones at Yucca Mountain, focusing primarily on the central part of the mountain where the potential repository block is located

  4. Biotechnological Aspects of Microbial Extracellular Electron Transfer

    Science.gov (United States)

    Kato, Souichiro

    2015-01-01

    Extracellular electron transfer (EET) is a type of microbial respiration that enables electron transfer between microbial cells and extracellular solid materials, including naturally-occurring metal compounds and artificial electrodes. Microorganisms harboring EET abilities have received considerable attention for their various biotechnological applications, in addition to their contribution to global energy and material cycles. In this review, current knowledge on microbial EET and its application to diverse biotechnologies, including the bioremediation of toxic metals, recovery of useful metals, biocorrosion, and microbial electrochemical systems (microbial fuel cells and microbial electrosynthesis), were introduced. Two potential biotechnologies based on microbial EET, namely the electrochemical control of microbial metabolism and electrochemical stimulation of microbial symbiotic reactions (electric syntrophy), were also discussed. PMID:26004795

  5. Hydrodynamics of microbial filter feeding.

    Science.gov (United States)

    Nielsen, Lasse Tor; Asadzadeh, Seyed Saeed; Dölger, Julia; Walther, Jens H; Kiørboe, Thomas; Andersen, Anders

    2017-08-29

    Microbial filter feeders are an important group of grazers, significant to the microbial loop, aquatic food webs, and biogeochemical cycling. Our understanding of microbial filter feeding is poor, and, importantly, it is unknown what force microbial filter feeders must generate to process adequate amounts of water. Also, the trade-off in the filter spacing remains unexplored, despite its simple formulation: A filter too coarse will allow suitably sized prey to pass unintercepted, whereas a filter too fine will cause strong flow resistance. We quantify the feeding flow of the filter-feeding choanoflagellate Diaphanoeca grandis using particle tracking, and demonstrate that the current understanding of microbial filter feeding is inconsistent with computational fluid dynamics (CFD) and analytical estimates. Both approaches underestimate observed filtration rates by more than an order of magnitude; the beating flagellum is simply unable to draw enough water through the fine filter. We find similar discrepancies for other choanoflagellate species, highlighting an apparent paradox. Our observations motivate us to suggest a radically different filtration mechanism that requires a flagellar vane (sheet), something notoriously difficult to visualize but sporadically observed in the related choanocytes (sponges). A CFD model with a flagellar vane correctly predicts the filtration rate of D. grandis , and using a simple model we can account for the filtration rates of other microbial filter feeders. We finally predict how optimum filter mesh size increases with cell size in microbial filter feeders, a prediction that accords very well with observations. We expect our results to be of significance for small-scale biophysics and trait-based ecological modeling.

  6. Weathering of post-impact hydrothermal deposits from the Haughton impact structure: implications for microbial colonization and biosignature preservation.

    Science.gov (United States)

    Izawa, M R M; Banerjee, Neil R; Osinski, G R; Flemming, R L; Parnell, J; Cockell, C S

    2011-01-01

    Meteorite impacts are among the very few processes common to all planetary bodies with solid surfaces. Among the effects of impact on water-bearing targets is the formation of post-impact hydrothermal systems and associated mineral deposits. The Haughton impact structure (Devon Island, Nunavut, Canada, 75.2 °N, 89.5 °W) hosts a variety of hydrothermal mineral deposits that preserve assemblages of primary hydrothermal minerals commonly associated with secondary oxidative/hydrous weathering products. Hydrothermal mineral deposits at Haughton include intra-breccia calcite-marcasite vugs, small intra-breccia calcite or quartz vugs, intra-breccia gypsum megacryst vugs, hydrothermal pipe structures and associated surface "gossans," banded Fe-oxyhydroxide deposits, and calcite and quartz veins and coatings in shattered target rocks. Of particular importance are sulfide-rich deposits and their associated assemblage of weathering products. Hydrothermal mineral assemblages were characterized structurally, texturally, and geochemically with X-ray diffraction, micro X-ray diffraction, optical and electron microscopy, and inductively coupled plasma atomic emission spectroscopy. Primary sulfides (marcasite and pyrite) are commonly associated with alteration minerals, including jarosite (K,Na,H(3)O)Fe(3)(SO(4))(2)(OH)(6), rozenite FeSO(4)·4(H(2)O), copiapite (Fe,Mg)Fe(4)(SO(4))(6)(OH)(2)·20(H(2)O), fibroferrite Fe(SO(4))(OH)·5(H(2)O), melanterite FeSO(4)·7(H(2)O), szomolnokite FeSO(4)·H(2)O, goethite α-FeO(OH), lepidocrocite γ-FeO(OH) and ferrihydrite Fe(2)O(3)·0.5(H(2)O). These alteration assemblages are consistent with geochemical conditions that were locally very different from the predominantly circumneutral, carbonate-buffered environment at Haughton. Mineral assemblages associated with primary hydrothermal activity, and the weathering products of such deposits, provide constraints on possible microbial activity in the post-impact environment. The initial period of

  7. Mountain prophecies | IDRC - International Development Research ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    2010-12-23

    Dec 23, 2010 ... ... of 2002 as the International Year of Mountains may seem an unlikely choice. ... streams) is begging new questions about how best to preserve this crucial ... In addition, there are the ever-looming hazards of avalanches, ...

  8. Characterize Eruptive Processes at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    D. Krier

    2004-01-01

    The purpose of this scientific analysis report, ''Characterize Eruptive Processes at Yucca Mountain, Nevada'', is to present information about natural volcanic systems and the parameters that can be used to model their behavior. This information is used to develop parameter-value distributions appropriate for analysis of the consequences of volcanic eruptions through a repository at Yucca Mountain. This scientific analysis report provides information to four other reports: ''Number of Waste Packages Hit by Igneous Intrusion'', (BSC 2004 [DIRS 170001]); ''Atmospheric Dispersal and Deposition of Tephra from Potential Volcanic Eruption at Yucca Mountain, Nevada'' (BSC 2004 [DIRS 170026]); ''Dike/Drift Interactions'' (BSC 2004 [DIRS 170028]); ''Development of Earthquake Ground Motion Input for Preclosure Seismic Design and Postclosure Performance Assessment of a Geologic Repository at Yucca Mountain, NV'' (BSC 2004 [DIRS 170027], Section 6.5). This report is organized into seven major sections. This section addresses the purpose of this document. Section 2 addresses quality assurance, Section 3 the use of software, Section 4 identifies the requirements that constrain this work, and Section 5 lists assumptions and their rationale. Section 6 presents the details of the scientific analysis and Section 7 summarizes the conclusions reached

  9. Human Infection in Wild Mountain Gorillas

    Centers for Disease Control (CDC) Podcasts

    This podcast discusses a study about the transmission of Human Metapneumovirus Infection to wild mountain gorillas in Rwanda in 2009, published in the April 2011 issue of Emerging Infectious Diseases. Dr. Ian Lipkin, Director of the Center for Infection and Immunity and Dr. Gustavo Palacios, investigator in the Center of Infection & Immunity share details of this study.

  10. Determination of characteristics maximal runoff Mountain Rivers

    African Journals Online (AJOL)

    Ovcharuk V and Todorova O

    Odessa State Environmental University, Ukraine. Received: 03 December 2015 / Accepted: 23 April 2016 / Published online: 01 May 2016. ABSTRACT. This article has been examined maximum runoff of the rivers of the Crimean Mountains. The rivers flow through the western and eastern part of the northern slope Crimean ...

  11. The mountain Cer: Potentials for tourism development

    Directory of Open Access Journals (Sweden)

    Grčić Mirko D.

    2003-01-01

    Full Text Available In northwest of Serbia in the meridians directions an elongated mountain range of Cer with Iverak and Vlašić stretches itself. On the north it goes down to Mačva and Posavina, on the west to Podrinje, on the east to the valley of Kolubara, on the south to the basins and valleys of Jadar and upper Kolubara, which separate it from the mountains of Valjevo and Podrinje area. Cer mountain offers extremely good condition for development of eco-tourism. The variety of relief with gorgeous see-sites, natural rarities, convenient bio-climatic conditions, significant water resources, forest complexes, medieval fortresses, cultural-historic monuments, richness of flora and fauna, preserved rural environment, traditions and customs of local population, were all neglected as strategic factors in the development of tourism. This mountain’s potentials are quite satisfactory for the needs of eco-tourism, similar to the National Park of Fruška Gora, but it has lacked an adequate ecotourist strategy so far. This study aims to pointing to the potential and possibilities of ecotourist valorization of this mountain.

  12. Mountain biking. Breezy ups and traumatic downs

    International Nuclear Information System (INIS)

    Schueller, G.

    2010-01-01

    For more than two decades the popularity of mountain biking as a national pastime as well as a competitive sport has been undiminished. However, its related risks are not monitored as closely as those, for example, of skiing. The injuries caused by mountain biking are specific and cannot be compared with those caused by other cycling sports. This is due not only to the characteristics of the terrain but also to the readiness to assume a higher risk compared to cycle racing. The particular value of radiology is in the acute trauma setting. Most often musculoskeletal lesions must be examined and digital radiography and MRI are the most useful techniques. Severe trauma of the cranium, face, spine, thorax and abdomen are primarily evaluated with CT, particularly in dedicated trauma centers. Therefore, radiology can play a role in the rapid diagnosis and optimal treatment of the trauma-related injuries of mountain biking. Thus, the unnecessarily high economical damage associated with mountain biking can be avoided. (orig.) [de

  13. [Mountain biking : Breezy ups and traumatic downs].

    Science.gov (United States)

    Schueller, G

    2010-05-01

    For more than two decades the popularity of mountain biking as a national pastime as well as a competitive sport has been undiminished. However, its related risks are not monitored as closely as those, for example, of skiing. The injuries caused by mountain biking are specific and cannot be compared with those caused by other cycling sports. This is due not only to the characteristics of the terrain but also to the readiness to assume a higher risk compared to cycle racing.The particular value of radiology is in the acute trauma setting. Most often musculoskeletal lesions must be examined and digital radiography and MRI are the most useful techniques. Severe trauma of the cranium, face, spine, thorax and abdomen are primarily evaluated with CT, particularly in dedicated trauma centers. Therefore, radiology can play a role in the rapid diagnosis and optimal treatment of the trauma-related injuries of mountain biking. Thus, the unnecessarily high economical damage associated with mountain biking can be avoided.

  14. Mountain Biking with Groups: A "Safe" Activity?

    Science.gov (United States)

    Allen, Terry

    2001-01-01

    A survey mailed to 200 British mountain bike leaders found that rates of cycling accidents and injuries were greater in forests and woodlands than on terrain where a license is required to lead groups of young cyclists. Excessive speed was mentioned in most accidents, coupled with poor use of breaks in many cases. (SV)

  15. Experiments on sediment pulses in mountain rivers

    Science.gov (United States)

    Y. Cui; T. E. Lisle; J. E. Pizzuto; G. Parker

    1998-01-01

    Pulses of sediment can be introduced into mountain rivers from such mechanisms as debris flows, landslides and fans at tributary confluences. These processes can be natural or associated with the activities of humans, as in the case of a pulse created by sediment derived from timber harvest or the removal of a dam. How does the river digest these pulses?

  16. Cerebral blood flow in acute mountain sickness

    DEFF Research Database (Denmark)

    Jensen, J B; Wright, Anne; Lassen, N A

    1990-01-01

    Changes in cerebral blood flow (CBF) were measured using the radioactive xenon technique and were related to the development of acute mountain sickness (AMS). In 12 subjects, ascending from 150 to 3,475 m, CBF was 24% increased at 24 h [45.1 to 55.9 initial slope index (ISI) units] and 4% increased...

  17. Rocky Mountain spotted fever in dogs, Brazil.

    Science.gov (United States)

    Labruna, Marcelo B; Kamakura, Orson; Moraes-Filho, Jonas; Horta, Mauricio C; Pacheco, Richard C

    2009-03-01

    Clinical illness caused by Rickettsia rickettsii in dogs has been reported solely in the United States. We report 2 natural clinical cases of Rocky Mountain spotted fever in dogs in Brazil. Each case was confirmed by seroconversion and molecular analysis and resolved after doxycycline therapy.

  18. Air pollution: worldwide effects on mountain forests

    Science.gov (United States)

    Anne M. Rosenthal; Andrzej Featured: Bytnerowicz

    2004-01-01

    Widespread forest decline in remote areas of the Carpathian Mountains has been linked to air pollution from urban and industrial regions. Besides injuring plant tissues directly, pollutants may deposit to soils and water, drastically changing susceptible ecosystems. Researcher Andrzej Bytnerowicz has developed effective methods for assessing air quality over wildlands...

  19. Mountain Guides: Between Ethics and Socioeconomic Trends

    Science.gov (United States)

    Long, Thierry; Bazin, Damien; Massiera, Bernard

    2012-01-01

    This study analysed mountain guides' representations of environmental responsibility and explored the paradox that these professionals face: using nature as a source of income while trying to preserve it. The study was mainly guided by the philosophical literature on this topic and made use of the concepts of sustainable development and nature.…

  20. Characterize Eruptive Processes at Yucca Mountain, Nevada

    Energy Technology Data Exchange (ETDEWEB)

    D. Krier

    2004-10-04

    The purpose of this scientific analysis report, ''Characterize Eruptive Processes at Yucca Mountain, Nevada'', is to present information about natural volcanic systems and the parameters that can be used to model their behavior. This information is used to develop parameter-value distributions appropriate for analysis of the consequences of volcanic eruptions through a repository at Yucca Mountain. This scientific analysis report provides information to four other reports: ''Number of Waste Packages Hit by Igneous Intrusion'', (BSC 2004 [DIRS 170001]); ''Atmospheric Dispersal and Deposition of Tephra from Potential Volcanic Eruption at Yucca Mountain, Nevada'' (BSC 2004 [DIRS 170026]); ''Dike/Drift Interactions'' (BSC 2004 [DIRS 170028]); ''Development of Earthquake Ground Motion Input for Preclosure Seismic Design and Postclosure Performance Assessment of a Geologic Repository at Yucca Mountain, NV'' (BSC 2004 [DIRS 170027], Section 6.5). This report is organized into seven major sections. This section addresses the purpose of this document. Section 2 addresses quality assurance, Section 3 the use of software, Section 4 identifies the requirements that constrain this work, and Section 5 lists assumptions and their rationale. Section 6 presents the details of the scientific analysis and Section 7 summarizes the conclusions reached.

  1. Thunder Mountain School Is Something Special.

    Science.gov (United States)

    NJEA Review, 1979

    1979-01-01

    This article describes Thunder Mountain School, operated year round by the Newton Board of Education under a special use permit granted by the National Park Service. The center includes sports facilities, nature preserves, a farm, and historic sites for use by residential and day students, kindergarten through college. (SJL)

  2. MOUNTAIN NATURAL BIODIVERSITY CONSERVATION IN RUSSIA

    Directory of Open Access Journals (Sweden)

    Arkady Tishkov

    2012-01-01

    Full Text Available High biodiversity and degree of endemism of mountain biota strengthen the mountain regions’ status for the territorial nature conservation. Analysis of the protected areas’ representativeness in various mountain regions of Russia shows some discrepancy between their quantity, square and regional biodiversity originality. The biggest divergences are marked for the Northern Caucasus. The main problems: small area of the protected territories and also cluster character of their spatial distribution, mostly in the high mountains are not supposed to conform with the highest values of the regional flora’s and fauna’s uniqueness, to compensate representativeness of the protected biota and, in anyway, to correspond with the purpose of nature protection frame—the protected territories ecologic network’s forming. The situation in the Urals, Siberia and the Far East seems to be better. The large areas of the protected territories are in general agreement with the high originality of the nature ecosystems. Nevertheless each concrete case needs analysis of the regional biota’s and ecosystems’ biodiversity distribution within the protected areas, including character and (or unique elements of the regional biodiversity to be held. The development of the effectual territorial conservation of mountain regions needs differential approach. The creation of the large representative parcels of nature landscapes in the key-areas has the considerable meaning in the low-developed regions, difficult to access. And well-developed regions have the necessity of nature protected territories’ network development and the planning of the ecological frame’s forming. The territorial biodiversity conservation, including the system of federal, regional and local levels with protective conservation of the rare species has to be combined with ecosystem’s restoration, especially in the zones disturbed by erosion, recreation and military actions. Also it is

  3. Extreme ground motions and Yucca Mountain

    Science.gov (United States)

    Hanks, Thomas C.; Abrahamson, Norman A.; Baker, Jack W.; Boore, David M.; Board, Mark; Brune, James N.; Cornell, C. Allin; Whitney, John W.

    2013-01-01

    Yucca Mountain is the designated site of the underground repository for the United States' high-level radioactive waste (HLW), consisting of commercial and military spent nuclear fuel, HLW derived from reprocessing of uranium and plutonium, surplus plutonium, and other nuclear-weapons materials. Yucca Mountain straddles the western boundary of the Nevada Test Site, where the United States has tested nuclear devices since the 1950s, and is situated in an arid, remote, and thinly populated region of Nevada, ~100 miles northwest of Las Vegas. Yucca Mountain was originally considered as a potential underground repository of HLW because of its thick units of unsaturated rocks, with the repository horizon being not only ~300 m above the water table but also ~300 m below the Yucca Mountain crest. The fundamental rationale for a geologic (underground) repository for HLW is to securely isolate these materials from the environment and its inhabitants to the greatest extent possible and for very long periods of time. Given the present climate conditions and what is known about the current hydrologic system and conditions around and in the mountain itself, one would anticipate that the rates of infiltration, corrosion, and transport would be very low—except for the possibility that repository integrity might be compromised by low-probability disruptive events, which include earthquakes, strong ground motion, and (or) a repository-piercing volcanic intrusion/eruption. Extreme ground motions (ExGM), as we use the phrase in this report, refer to the extremely large amplitudes of earthquake ground motion that arise at extremely low probabilities of exceedance (hazard). They first came to our attention when the 1998 probabilistic seismic hazard analysis for Yucca Mountain was extended to a hazard level of 10-8/yr (a 10-4/yr probability for a 104-year repository “lifetime”). The primary purpose of this report is to summarize the principal results of the ExGM research program

  4. Carbohydrates and thermal properties indicate a decrease in stable aggregate carbon following forest colonization of mountain grassland

    DEFF Research Database (Denmark)

    Guidi, Claudia; Cannella, David; Leifeld, Jens

    2015-01-01

    and thermally labile C showed similar patterns in bulk soil, suggesting that thermal analysis can be used to complement chemical analysis although a straightforward relationship could not be established. Following forest expansion on abandoned grassland, ratios of microbially to plant-derived carbohydrates......In mountainous areas of Europe, the abandonment of grasslands followed by forest expansion is the dominant land-use change. Labile (i.e. easily decomposable) litter represents the major source for soil microbial products, which promote soil aggregation and long-term C stabilization. Our objective...... was to investigate changes in the content and origin of soil C components involved into aggregate stabilization (i.e. carbohydrates) following forest expansion on abandoned grassland in the Alps, where only few studies have been conducted. Changes in carbohydrates and thermally labile C were assessed along a land...

  5. Natural Microbial Assemblages Reflect Distinct Organismal and Functional Partitioning

    Science.gov (United States)

    Wilmes, P.; Andersson, A.; Kalnejais, L. H.; Verberkmoes, N. C.; Lefsrud, M. G.; Wexler, M.; Singer, S. W.; Shah, M.; Bond, P. L.; Thelen, M. P.; Hettich, R. L.; Banfield, J. F.

    2007-12-01

    The ability to link microbial community structure to function has long been a primary focus of environmental microbiology. With the advent of community genomic and proteomic techniques, along with advances in microscopic imaging techniques, it is now possible to gain insights into the organismal and functional makeup of microbial communities. Biofilms growing within highly acidic solutions inside the Richmond Mine (Iron Mountain, Redding, California) exhibit distinct macro- and microscopic morphologies. They are composed of microorganisms belonging to the three domains of life, including archaea, bacteria and eukarya. The proportion of each organismal type depends on sampling location and developmental stage. For example, mature biofilms floating on top of acid mine drainage (AMD) pools exhibit layers consisting of a densely packed bottom layer of the chemoautolithotroph Leptospirillum group II, a less dense top layer composed mainly of archaea, and fungal filaments spanning across the entire biofilm. The expression of cytochrome 579 (the most highly abundant protein in the biofilm, believed to be central to iron oxidation and encoded by Leptospirillum group II) is localized at the interface of the biofilm with the AMD solution, highlighting that biofilm architecture is reflected at the functional gene expression level. Distinct functional partitioning is also apparent in a biological wastewater treatment system that selects for distinct polyphosphate accumulating organisms. Community genomic data from " Candidatus Accumulibacter phosphatis" dominated activated sludge has enabled high mass-accuracy shotgun proteomics for identification of key metabolic pathways. Comprehensive genome-wide alignment of orthologous proteins suggests distinct partitioning of protein variants involved in both core-metabolism and specific metabolic pathways among the dominant population and closely related species. In addition, strain- resolved proteogenomic analysis of the AMD biofilms

  6. MICROBIAL SURFACTANTS IN ENVIRONMENTAL TECHNOLOGIES

    Directory of Open Access Journals (Sweden)

    T. P. Pirog

    2015-08-01

    Full Text Available It was shown literature and own experimental data concerning the use of microbial surface active glycolipids (rhamno-, sophoro- and trehalose lipids and lipopeptides for water and soil purification from oil and other hydrocarbons, removing toxic heavy metals (Cu2+, Cd2+, Ni2+, Pb2+, degradation of complex pollution (oil and other hydrocarbons with heavy metals, and the role of microbial surfactants in phytoremediation processes. The factors that limit the use of microbial surfactants in environmental technologies are discussed. Thus, at certain concentrations biosurfactant can exhibit antimicrobial properties and inhibit microorganisms destructing xenobiotics. Microbial biodegradability of surfactants may also reduce the effectiveness of bioremediation. Development of effective technologies using microbial surfactants should include the following steps: monitoring of contaminated sites to determine the nature of pollution and analysis of the autochthonous microbiota; determining the mode of surfactant introduction (exogenous addition of stimulation of surfactant synthesis by autochthonous microbiota; establishing an optimal concentration of surfactant to prevent exhibition of antimicrobial properties and rapid biodegradation; research both in laboratory and field conditions.

  7. Evaluation of Potential Impacts of Microbial Activity on Drift Chemistry

    Energy Technology Data Exchange (ETDEWEB)

    Y. Wang

    2004-11-18

    ''Evaluation of Potential Impacts of Microbial Activity on Drift Chemistry'' focuses on the potential for microbial communities that could be active in repository emplacement drifts to influence the in-drift bulk chemical environment. This report feeds analyses to support the inclusion or exclusion of features, events, and processes (FEPs) in the total system performance assessment (TSPA) for the license application (LA), but this work is not expected to generate direct feeds to the TSPA-LA. The purpose was specified by, and the evaluation was performed and is documented in accordance with, ''Technical Work Plan For: Near-Field Environment and Transport In-Drift Geochemistry Analyses'' (BSC 2004 [DIRS 172402], Section 2.1). This report addresses all of the FEPs assigned by the technical work plan (TWP), including the development of exclusion arguments for FEPs that are not carried forward to the TSPA-LA. Except for an editorial correction noted in Section 6.2, there were no other deviations from the TWP. This report documents the completion of all assigned tasks, as follows (BSC 2004 DIRS 172402, Section 1.2.1): (1) Perform analyses to evaluate the potential for microbial activity in the waste emplacement drift under the constraints of anticipated physical and chemical conditions. (2) Evaluate uncertainties associated with these analyses. (3) Determine whether the potential for microbes warrants a feed to TSPA-LA to account for predicted effects on repository performance. (4) Provide information to address the ''Yucca Mountain Review Plan, Final Report'' (NUREG-1804) (NRC 2003 [DIRS 163274]) and Key Technical Issues and agreements, as appropriate. (5) Develop information for inclusion or exclusion of FEPs.

  8. Evaluation of Potential Impacts of Microbial Activity on Drift Chemistry

    International Nuclear Information System (INIS)

    Y. Wang

    2004-01-01

    ''Evaluation of Potential Impacts of Microbial Activity on Drift Chemistry'' focuses on the potential for microbial communities that could be active in repository emplacement drifts to influence the in-drift bulk chemical environment. This report feeds analyses to support the inclusion or exclusion of features, events, and processes (FEPs) in the total system performance assessment (TSPA) for the license application (LA), but this work is not expected to generate direct feeds to the TSPA-LA. The purpose was specified by, and the evaluation was performed and is documented in accordance with, ''Technical Work Plan For: Near-Field Environment and Transport In-Drift Geochemistry Analyses'' (BSC 2004 [DIRS 172402], Section 2.1). This report addresses all of the FEPs assigned by the technical work plan (TWP), including the development of exclusion arguments for FEPs that are not carried forward to the TSPA-LA. Except for an editorial correction noted in Section 6.2, there were no other deviations from the TWP. This report documents the completion of all assigned tasks, as follows (BSC 2004 DIRS 172402, Section 1.2.1): (1) Perform analyses to evaluate the potential for microbial activity in the waste emplacement drift under the constraints of anticipated physical and chemical conditions. (2) Evaluate uncertainties associated with these analyses. (3) Determine whether the potential for microbes warrants a feed to TSPA-LA to account for predicted effects on repository performance. (4) Provide information to address the ''Yucca Mountain Review Plan, Final Report'' (NUREG-1804) (NRC 2003 [DIRS 163274]) and Key Technical Issues and agreements, as appropriate. (5) Develop information for inclusion or exclusion of FEPs

  9. ARCOS Network: A Sustainable Mountain Development Hub for Africa

    Directory of Open Access Journals (Sweden)

    Gilbert Muvunankiko

    2017-05-01

    Full Text Available The African continent is endowed with mountains of high productivity, biodiversity, endemism, and cultural diversity. African mountain ecosystems play an important role in economic development, poverty alleviation, and environmental protection. However, climate change and extreme events, as well as human activities, alter the capacity of mountains to provide such services to millions of Africans who depend on them. Since the creation in 1995 of the Albertine Rift Conservation Society (ARCOS, mountains have been at the core of its programs, and collaboration among stakeholders is a key aspect of its search for sustainable solutions to threats affecting African mountains.

  10. What is microbial community ecology?

    Science.gov (United States)

    Konopka, Allan

    2009-11-01

    The activities of complex communities of microbes affect biogeochemical transformations in natural, managed and engineered ecosystems. Meaningfully defining what constitutes a community of interacting microbial populations is not trivial, but is important for rigorous progress in the field. Important elements of research in microbial community ecology include the analysis of functional pathways for nutrient resource and energy flows, mechanistic understanding of interactions between microbial populations and their environment, and the emergent properties of the complex community. Some emergent properties mirror those analyzed by community ecologists who study plants and animals: biological diversity, functional redundancy and system stability. However, because microbes possess mechanisms for the horizontal transfer of genetic information, the metagenome may also be considered as a community property.

  11. Microbial processes in coastal pollution

    International Nuclear Information System (INIS)

    Capone, D.G.; Bauer, J.E.

    1992-01-01

    In this chapter, the authors describe the nature and range of some of the interactions that can occur between the microbiota and environmental contaminants in coastal areas. The implications of such interactions are also discussed. Pollutant types include inorganic nutrients, heavy metals, bulk organics, organic contaminants, pathogenic microorganisms and microbial pollutants. Both the effects of pollutants such as petroleum hydrocarbons on natural microbial populations and the mitigation of contaminant effects by complexation and biodegradation are considered. Finally, several areas of emerging concerns are presented that involve a confluence of biogeochemistry, microbial ecology and applied and public health microbiology. These concerns range in relevance from local/regional to oceanic/global scales. 308 ref

  12. Floristic analysis of the wanda mountain in north eastern china

    International Nuclear Information System (INIS)

    Wang, H.; Xu, L.; Zhang, Z.

    2016-01-01

    The plants of the Wanda Mountain area were investigated between 2009 to 2013. The results show that Wanda Mountain has 95 families of seed plants distributed in 334 genera and 705 species. A geographical component analysis shows that in addition to a small number of cosmopolitan species, cold, temperate and tropical species account for 14.9%, 77.3% and 4.4% of the total species, respectively, indicating that the flora of the Wanda Mountains exhibits a significant temperate nature and includes a small number of tropical components and certain cold components. In addition, the Wanda Mountains show a remarkable level of endemism and are geographically related to other regions in East Asia, particularly Japan. Furthermore, the Wanda Mountains present a complicated species composition, with a total of 14 distribution patterns and 10 variants. The coefficient of similarity between the flora of the Wanda Mountain area and the flora of the Changbai Mountain area is 43.1%, and the coefficient of similarity between the flora of the Wanda Mountain area and the flora of the Lesser Xingan Mountain area is 49.2%, indicating that the plants of the Wanda Mountain area are more common to those of the Lesser Xingan Mountain area. (author)

  13. Mountain cedar allergens found in nonpollen tree parts.

    Science.gov (United States)

    Goetz, D W; Goetz, M A; Whisman, B A

    1995-09-01

    Mountain cedar (Juniperus ashei) pollen is the principal aeroallergen in south central Texas from late December through February. The major mountain cedar allergen is a 40-kD glycoprotein, gp40. To identify allergens in mountain cedar wood, leaves, and berries and to detect mountain cedar allergen in smoke from burning male or female trees. SDS-PAGE plus mountain cedar human sIgE and monoclonal antibody immunoblots identified mountain cedar allergens within pollen and nonpollen tree part extracts. IgE immunoblots identified a single wood allergen at 36 kD and three berry allergens at 36, 26-27, and 21 kD, in addition to known pollen allergens. Mountain cedar monoclonal antibody bound an allergen epitope present not only on 40, 33, and 28-kD pollen allergens, but also on 36 and 32-kD wood allergens, and the 26-27-kD berry allergen. Immunoblot studies detected no mountain cedar allergen in leaves and no allergen in smoke from burning male and female trees. Allergens constituted a much smaller percentage of extractable protein in wood and berries than in pollen. Mountain cedar berry allergen content is too small to give credence to the ingestion of berries as a folk medicine treatment of mountain cedar pollinosis. In addition, while smoke from burning mountain cedar trees may be irritating, it contains no allergens that could cause allergic rhinoconjunctivitis.

  14. Soil microbial activities and its relationship with soil chemical ...

    African Journals Online (AJOL)

    The fields assessed are organically managed Soils (OMS), Inorganically Managed Soils (IMS) and an Uncultivated Land having grass coverage (ULS). Soil Microbial Respiration (SMR), Microbial Biomass Carbon (MBC), Microbial Biomass Nitrogen (MBN) and Microbial Biomass Phosphorus (MBP) were analyzed.

  15. Advanced Microscopy of Microbial Cells

    DEFF Research Database (Denmark)

    Haagensen, Janus Anders Juul; Regenberg, Birgitte; Sternberg, Claus

    2011-01-01

    Growing awareness of heterogeneity in cells of microbial populations has emphasized the importance of advanced microscopy for visualization and understanding of the molecular mechanisms underlying cell-to-cell variation. In this review, we highlight some of the recent advances in confocal...... microscopy, super-resolution optical microscopy (STED, SIM, PALM) as well as atomic force microscopy and Raman spectroscopy. Using examples of bistability in microbial populations as well as biofilm development and differentiation in bacterial and yeast consortia, we demonstrate the importance of microscopy...

  16. Systems biology of Microbial Communities

    Energy Technology Data Exchange (ETDEWEB)

    Navid, A; Ghim, C; Fenley, A; Yoon, S; Lee, S; Almaas, E

    2008-04-11

    Microbes exist naturally in a wide range of environments, spanning the extremes of high acidity and high temperature to soil and the ocean, in communities where their interactions are significant. We present a practical discussion of three different approaches for modeling microbial communities: rate equations, individual-based modeling, and population dynamics. We illustrate the approaches with detailed examples. Each approach is best fit to different levels of system representation, and they have different needs for detailed biological input. Thus, this set of approaches is able to address the operation and function of microbial communities on a wide range of organizational levels.

  17. Microbial Heat Recovery Cell (MHRC) System Concept

    Energy Technology Data Exchange (ETDEWEB)

    None

    2017-09-01

    This factsheet describes a project that aimed to develop a microbial heat recovery cell (MHRC) system that combines a microbial reverse electrodialysis technology with waste heat recovery to convert industrial effluents into electricity and hydrogen.

  18. Microbial quality of a marine tidal pool

    CSIR Research Space (South Africa)

    Genthe, Bettina

    1995-01-01

    Full Text Available In this study the source of microbial pollution to a tidal pool was investigated. Both adjacent seawater which could contribute to possible faecal pollution and potential direct bather pollution were studied. The microbial quality of the marine...

  19. Marine Microbial Systems Ecology: Microbial Networks in the Sea

    NARCIS (Netherlands)

    Muijzer, G.; Stal, L.J.; Cretoiu, M.S.

    2016-01-01

    Next-generation sequencing of DNA has revolutionized microbial ecology. Using this technology, it became for the first time possible to analyze hundreds of samples simultaneously and in great detail. 16S rRNA amplicon sequencing, metagenomics and metatranscriptomics became available to determine the

  20. Microbial stratification and microbially catalyzed processes along a hypersaline chemocline

    Science.gov (United States)

    Hyde, A.; Joye, S. B.; Teske, A.

    2017-12-01

    Orca Basin is the largest deep hypersaline anoxic basin in the world, covering over 400 km2. Located at the bottom of the Gulf of Mexico, this body of water reaches depths of 200 meters and is 8 times denser (and more saline) than the overlying seawater. The sharp pycnocline prevents any significant vertical mixing and serves as a particle trap for sinking organic matter. These rapid changes in salinity, oxygen, organic matter, and other geochemical parameters present unique conditions for the microbial communities present. We collected samples in 10m intervals throughout the chemocline. After filtering the water, we used high-throughput bacterial and archaeal 16S rRNA gene sequencing to characterize the changing microbial community along the Orca Basin chemocline. The results reveal a dominance of microbial taxa whose biogeochemical function is entirely unknown. We then used metagenomic sequencing and reconstructed genomes for select samples, revealing the potential dominant metabolic processes in the Orca Basin chemocline. Understanding how these unique geochemical conditions shape microbial communities and metabolic capabilities will have implications for the ocean's biogeochemical cycles and the consequences of expanding oxygen minimum zones.

  1. Microbial community structure elucidates performance of Glyceria maxima plant microbial fuel cell

    NARCIS (Netherlands)

    Timmers, R.A.; Rothballer, M.; Strik, D.P.B.T.B.; Engel, M.; Schulz, M.; Hartmann, A.; Hamelers, H.V.M.; Buisman, C.J.N.

    2012-01-01

    The plant microbial fuel cell (PMFC) is a technology in which living plant roots provide electron donor, via rhizodeposition, to a mixed microbial community to generate electricity in a microbial fuel cell. Analysis and localisation of the microbial community is necessary for gaining insight into

  2. Microbial incorporation of nitrogen in stream detritus

    Science.gov (United States)

    Diane M. Sanzone; Jennifer L. Tank; Judy L. Meyer; Patrick J. Mulholland; Stuart E.G. Findlay

    2001-01-01

    We adapted the chloroform fumigation method to determine microbial nitrogen (N) and microbial incorporation of 15N on three common substrates [leaves, wood and fine benthic organic matter (FBOM)] in three forest streams. We compared microbial N and 15 content of samples collected during a 6-week15N-NH...

  3. Microbially produced phytotoxins and plant disease management ...

    African Journals Online (AJOL)

    Nowadays, these evaluation techniques are becoming an important complement to classical breeding methods. The knowledge of the inactivation of microbial toxins has led to the use of microbial enzymes to inactivate phytotoxins thereby reducing incidence and severity of disease induced by microbial toxins. Considering ...

  4. Rail Access to Yucca Mountain: Critical Issues

    International Nuclear Information System (INIS)

    Halstead, R. J.; Dilger, F.; Moore, R. C.

    2003-01-01

    The proposed Yucca Mountain repository site currently lacks rail access. The nearest mainline railroad is almost 100 miles away. Absence of rail access could result in many thousands of truck shipments of spent nuclear fuel and high-level radioactive waste. Direct rail access to the repository could significantly reduce the number of truck shipments and total shipments. The U.S. Department of Energy (DOE) identified five potential rail access corridors, ranging in length from 98 miles to 323 miles, in the Final Environmental Impact Statement (FEIS) for Yucca Mountain. The FEIS also considers an alternative to rail spur construction, heavy-haul truck (HHT) delivery of rail casks from one of three potential intermodal transfer stations. The authors examine the feasibility and cost of the five rail corridors, and DOE's alternative proposal for HHT transport. The authors also address the potential for rail shipments through the Las Vegas metropolitan area

  5. Stoneflies (Plecoptera, Insecta from Vrachanska Planina Mountains

    Directory of Open Access Journals (Sweden)

    VIOLETA TYUFEKCHIEVA

    2016-05-01

    Full Text Available This work summarizes both literature and new data on the fauna of Plecoptera (Insecta of the Vrachanska Planina Mountains, Bulgaria. A total of 20 species and seven subspecies are known from the mountain. The recorded stoneflies belong to 12 genera and seven families. They represent 25% of the 108 stoneflies currently known from Bulgaria. Among the 27 species that have been recorded, two are Critically Endangered (CR, one –Endangered (EN and ten – Vulnerable (VU. From a zoogeographical point of view, one subspecies and four species from the Plecoptera, recorded in Vrachanska Planina Mts., are Balkan endemics: Capnopsis schilleri balcanica Zwick, 1984, Leuctra balcanica Rauser, 1965, Leuctra hirsuta Bogoescu, Tabacaru, 1960, Nemoura braaschi Joost, 1970 and Isoperla belai Illies, 1963. Four of the recorded species are rare for Bulgaria.

  6. Teach yourself visually OS X Mountain Lion

    CERN Document Server

    McFedries, Paul

    2012-01-01

    Get to know the new cat in the pride-Mac OS X Mountain Lion-with this VISUAL guide Apple's new Mac OS X Mountain Lion is impressive, with features and functions that will be familiar to Mac users from their iPhones and iPads. Make sure you get the most out of your new big cat with this practical guide. Using step-by-step instructions and full-color screenshots or illustrations on virtually every page-the hallmark of the practical Teach Yourself VISUALLY series-this book clearly shows you how to accomplish tasks, rather than burying you with paragraphs of text. You'll learn how to customize

  7. OS X Mountain Lion Portable Genius

    CERN Document Server

    Spivey, Dwight

    2012-01-01

    Essential tips and techniques on the Mac OS X features you use most! If you want the kind of hip, friendly help you'd get from friends on how to get the most of out of Mac OS X Mountain Lion, this is the guide you need. Jump right into the coolest new Mac OS X features like Game Center, Messages, and Notification, or get a better handle on the basic tools and shortcuts that will help keep your mountain cat purring. From customizing to using multimedia to syncing your Mac to other devices, this book saves you time and hassle, avoids fluff, and covers what you want to know most. New addition t

  8. TBM tunneling on the Yucca Mountain Project

    International Nuclear Information System (INIS)

    Morris, J.P.; Hansmire, W.H.

    1995-01-01

    The US Department of Energy's (DOE) Yucca Mountain Project (YMP) is a scientific endeavor to determine the suitability of Yucca Mountain for the first long-term, high-level nuclear waste repository in the United States. The current status of this long-term project from the construction perspective is described. A key element is construction of the Exploratory Studies Facility (ESF) Tunnel, which is being excavated with a 7.6 m (25 ft) diameter tunnel boring machine (TBM). Development of the ESF may include the excavation of over 15 km (9.3 mi) of tunnel varying in size from 3.0 to 7.6 m (10 to 25 ft). Prior to construction, extensive constructability reviews were an interactive part of the final design. The intent was to establish a constructable design that met the long-term stability requirements for radiological safety of a future repository, while maintaining flexibility for the scientific investigations and acceptable tunneling productivity

  9. Rocky Mountain spotted fever: a clinician's dilemma.

    Science.gov (United States)

    Masters, Edwin J; Olson, Gary S; Weiner, Scott J; Paddock, Christopher D

    2003-04-14

    Rocky Mountain spotted fever is still the most lethal tick-vectored illness in the United States. We examine the dilemmas facing the clinician who is evaluating the patient with possible Rocky Mountain spotted fever, with particular attention to the following 8 pitfalls in diagnosis and treatment: (1) waiting for a petechial rash to develop before diagnosis; (2) misdiagnosing as gastroenteritis; (3) discounting a diagnosis when there is no history of a tick bite; (4) using an inappropriate geographic exclusion; (5) using an inappropriate seasonal exclusion; (6) failing to treat on clinical suspicion; (7) failing to elicit an appropriate history; and (8) failing to treat with doxycycline. Early diagnosis and proper treatment save lives.

  10. Microbial communities in blueberry soils

    Science.gov (United States)

    Microbial communities thrive in the soil of the plant root zone and it is clear that these communities play a role in plant health. Although blueberry fields can be productive for decades, yields are sometimes below expectations and fields that are replanted sometimes underperform and/or take too lo...

  11. Advanced Microscopy of Microbial Cells

    DEFF Research Database (Denmark)

    Haagensen, Janus Anders Juul; Regenberg, Birgitte; Sternberg, Claus

    2011-01-01

    microscopy, super-resolution optical microscopy (STED, SIM, PALM) as well as atomic force microscopy and Raman spectroscopy. Using examples of bistability in microbial populations as well as biofilm development and differentiation in bacterial and yeast consortia, we demonstrate the importance of microscopy...

  12. Contribution of above- and below-ground plant traits to the structure and function of grassland soil microbial communities.

    Science.gov (United States)

    Legay, N; Baxendale, C; Grigulis, K; Krainer, U; Kastl, E; Schloter, M; Bardgett, R D; Arnoldi, C; Bahn, M; Dumont, M; Poly, F; Pommier, T; Clément, J C; Lavorel, S

    2014-10-01

    Abiotic properties of soil are known to be major drivers of the microbial community within it. Our understanding of how soil microbial properties are related to the functional structure and diversity of plant communities, however, is limited and largely restricted to above-ground plant traits, with the role of below-ground traits being poorly understood. This study investigated the relative contributions of soil abiotic properties and plant traits, both above-ground and below-ground, to variations in microbial processes involved in grassland nitrogen turnover. In mountain grasslands distributed across three European sites, a correlative approach was used to examine the role of a large range of plant functional traits and soil abiotic factors on microbial variables, including gene abundance of nitrifiers and denitrifiers and their potential activities. Direct effects of soil abiotic parameters were found to have the most significant influence on the microbial groups investigated. Indirect pathways via plant functional traits contributed substantially to explaining the relative abundance of fungi and bacteria and gene abundances of the investigated microbial communities, while they explained little of the variance in microbial activities. Gene abundances of nitrifiers and denitrifiers were most strongly related to below-ground plant traits, suggesting that they were the most relevant traits for explaining variation in community structure and abundances of soil microbes involved in nitrification and denitrification. The results suggest that consideration of plant traits, and especially below-ground traits, increases our ability to describe variation in the abundances and the functional characteristics of microbial communities in grassland soils. © The Author 2014. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  13. The Yucca Mountain Project Prototype Testing Program

    International Nuclear Information System (INIS)

    1989-10-01

    The Yucca Mountain Project is conducting a Prototype Testing Program to ensure that the Exploratory Shaft Facility (ESF) tests can be completed in the time available and to develop instruments, equipment, and procedures so the ESF tests can collect reliable and representative site characterization data. This report summarizes the prototype tests and their status and location and emphasizes prototype ESF and surface tests, which are required in the early stages of the ESF site characterization tests. 14 figs

  14. The Olympic Mountains Experiment for GPM (OLYMPEX)

    Science.gov (United States)

    Houze, R.; McMurdie, L. A.; Petersen, W. A.; Schwaller, M.

    2016-12-01

    The GPM satellite has made it possible to observe the amount and nature of precipitation in remote areas of midlatitudes, including oceans and mountain ranges. OLYMPEX conducted over the Olympic Mountains on the northwest coast of Washington State was designed to provide the means for evaluating the physical basis of the algorithms used to convert GPM satellite measurements to determine the amount and nature of precipitation in midlatitude extratropical cyclones. Microphysical processes producing precipitation are highly sensitive to the vertical profile of temperature. In the tropics, the domain of the TRMM satellite, the temperature profile varies only slightly. GPM algorithms, however, must account for the strong horizontal variation of temperature profiles in baroclinic storms systems of midlatitudes and for the variations of precipitation mechanisms caused by passage of these storms over mountains. The OLYMPEX scientific strategy was: 1) collect a statistically robust set of measurements in midlatitude cyclones upstream of, over, and downstream of a midlatitude mountain range that can be used to improve GPM satellite algorithms; 2) determine how the physics and dynamics of the mechanisms affecting precipitation formation in relation to storm structure and terrain. To accomplish these goals 3 aircraft, 4 scanning dual polarization Doppler radars, supplemental soundings, and sophisticated surface instruments were deployed on the Olympic Peninsula of Washington, where Pacific frontal systems produce seasonal precipitation of 2000-4000 mm. 13 storms were observed. 3 of these were atmospheric rivers. The NASA DC-8 and ER-2 aircraft overflew the storms with instruments similar to those on GPM. The U. North Dakota Citation sampled hydrometeors in situ. Preliminary analysis indicates that one of the primary modes of orographic enhancement is low-level moist flow rising over the lower windward slopes and producing many very small drops. Ice-phase processes producing

  15. Infantry Small-Unit Mountain Operations

    Science.gov (United States)

    2011-02-01

    should be on the uphill side of grass tussocks, small talus, and other level spots to avoid twisting an ankle or straining an Achilles tendon...should be extremely cautious while traveling on the side of a hill. During side-hill travel personnel are more vulnerable to twisted ankles , back injury...installation in the mountains is the fixed rope system. A fixed rope is a rope anchored in place to assist Soldiers in movement over difficult terrain

  16. Mountain biking injuries in children and adolescents.

    Science.gov (United States)

    Aleman, Kylee B; Meyers, Michael C

    2010-01-01

    Over the last decade, the sport of mountain biking has experienced extensive growth in youth participation. Due to the unpredictable nature of outdoor sport, a lack of rider awareness and increased participation, the number of injuries has unnecessarily increased. Many believe that the actual incidence of trauma in this sport is underestimated and is just the 'tip of the iceberg'. The most common mechanism of injury is usually attributed to downhill riding and forward falling. Although rare, this type of fall can result in serious cranial and thoraco-abdominal trauma. Head and neck trauma continue to be documented, often resulting in concussions and the possibility of permanent neurological sequelae. Upper limb injuries range from minor dermal abrasions, contusions and muscular strains to complex particular fracture dislocations. These are caused by attempting to arrest the face with an outstretched hand, leading to additional direct injury. Common overuse injuries include repeated compression from the handlebars and vibration leading to neurovascular complications in the hands. Along with reports of blunt abdominal trauma and lumbar muscle strains, lower extremity injuries may include various hip/pelvic/groin contusions, patellofemoral inflammation, and various muscle strains. The primary causes of mountain biking injuries in children and adolescents include overuse, excessive fatigue, age, level of experience, and inappropriate or improperly adjusted equipment. Additional factors contributing to trauma among this age group involve musculoskeletal immaturity, collisions and falls, excessive speed, environmental conditions, conditioning and fitness status of the rider, nonconservative behavioural patterns, and inadequate medical care. The limited available data restrict the identification and understanding of specific paediatric mountain biking injuries and injury mechanisms. Education about unnecessary risk of injury, use of protective equipment, suitable bikes

  17. Evaluating Cumulative Ascent:. Mountain Biking Meets Mandelbrot

    Science.gov (United States)

    Rapaport, D. C.

    The problem of determining total distance ascended during a mountain bike trip is addressed. Altitude measurements are obtained from GPS receivers utilizing both GPS-based and barometric altitude data, with data averaging used to reduce fluctuations. The estimation process is sensitive to the degree of averaging, and is related to the well-known question of determining coastline length. Barometric-based measurements prove more reliable, due to their insensitivity to GPS altitude fluctuations.

  18. Predicting the Future at Yucca Mountain

    International Nuclear Information System (INIS)

    Wilson, J. R.

    1999-01-01

    This paper summarizes a climate-prediction model funded by the DOE for the Yucca Mountain nuclear waste repository. Several articles in the open literature attest to the effects of the Global Ocean Conveyor upon paleoclimate, specifically entrance and exit from the ice age. The data shows that these millennial-scale effects are duplicated on the microscale of years to decades. This work also identifies how man may have influenced the Conveyor, affecting global cooling and warming for 2,000 years

  19. Groundwater quality in the Klamath Mountains, California

    Science.gov (United States)

    Bennett, George L.; Fram, Miranda S.

    2014-01-01

    Groundwater provides more than 40 percent of California’s drinking water. To protect this vital resource, the State of California created the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The Priority Basin Project of the GAMA Program provides a comprehensive assessment of the State’s groundwater quality and increases public access to groundwater-quality information. The Klamath Mountains constitute one of the study units being evaluated.

  20. Predicting the Future at Yucca Mountain

    Energy Technology Data Exchange (ETDEWEB)

    J. R. Wilson

    1999-07-01

    This paper summarizes a climate-prediction model funded by the DOE for the Yucca Mountain nuclear waste repository. Several articles in the open literature attest to the effects of the Global Ocean Conveyor upon paleoclimate, specifically entrance and exit from the ice age. The data shows that these millennial-scale effects are duplicated on the microscale of years to decades. This work also identifies how man may have influenced the Conveyor, affecting global cooling and warming for 2,000 years.

  1. Makran Mountain Range, Iran and Pakistan

    Science.gov (United States)

    1983-01-01

    The long folded mountain ridges and valleys of the coastal Makran Ranges of Iran and Pakistan (26.0N, 63.0E) illustrate the classical Trellis type of drainage pattern, common in this region. The Dasht River and its tributaries is the principal drainage network for this area. To the left, the continental drift of the northward bound Indian sub-continent has caused the east/west parallel ranges to bend in a great northward arc.

  2. Sulphur mountain: Cosmic ray intensity records

    International Nuclear Information System (INIS)

    Venkatesan, D.; Mathews, T.

    1985-01-01

    This book deals with the comic ray intensity registrations at the Sulphur Mountain Cosmic Ray Laboratory. The time series of intensity form a valuable data-set, for studying cosmic ray intensity variations and their dependence on solar activity. The IGY neutron monitor started operating from July 1, 1957 and continued through 1963. Daily mean values are tabulated for the period and these are also represented in plots. This monitor was set up by the National Research Council of Canada

  3. Man-induced transformation of mountain meadow soils of Aragats mountain massif (Armenia)

    Science.gov (United States)

    Avetisyan, M. H.

    2018-01-01

    The article considers issues of degradation of mountain meadow soils of the Aragats mountain massif of the Republic of Armenia and provides the averaged research results obtained for 2013 and 2014. The present research was initiated in the frames of long-term complex investigations of agroecosystems of Armenia’s mountain massifs and covered sod soils of high mountain meadow pasturelands and meadow steppe grasslands lying on southern slope of Mt. Aragats. With a purpose of studying the peculiarities of migration and transformation of flows of major nutrients namely carbon, nitrogen, phosphorus in study mountain meadow and meadow steppe belts of the Aragats massif we investigated water migration of chemical elements and regularities of their leaching depending on different belts. Field measurement data have indicated that organic carbon and humus in a heavily grazed plot are almost twice as low as on a control site. Lysimetric data analysis has demonstrated that heavy grazing and illegal deforestation have brought to an increase in intrasoil water acidity. The results generated from this research support a conclusion that a man’s intervention has brought to disturbance of structure and nutrient and water regimes of soils and loss of significant amounts of soil nutrients throughout the studied region.

  4. Mountains as early warning indicators of climate change

    Science.gov (United States)

    Williams, M. W.

    2015-12-01

    The panoramic splendor and complexity of mountain environments have inspired and challenged humans for centuries. These areas have been variously perceived as physical structures to be conquered, as sites of spiritual inspiration, and as some of the last untamed natural places on Earth. In our time, the perception that "mountains are forever" may provide solace to those seeking stability in a rapidly changing world. However, changes in the hydrology and in the abundance and species composition of the native flora and fauna of mountain ecosystems are potential bellwethers of global change, because these systems have a propensity to amplify environmental changes within specific portions of this landscape. Mountain areas are thus sentinels of climate change. We are seeing effects today in case histories I present from the Himalaya's, Andes, Alps, and Rocky Mountains. Furthermore, these ecosystem changes are occurring in mountain areas before they occur in downstream ecosystems. Thus, mountains are early warning indicators of perturbations such as climate change. The sensitivity of mountain ecosystems begs for enhanced protection and worldwide protection. Our understanding of the processes that control mountain ecosystems—climate interactions, snowmelt runoff, biotic diversity, nutrient cycling—is much less developed compared to downstream ecosystems where human habitation and development has resulted in large investments in scientific knowledge to sustain health and agriculture. To address these deficiencies, I propose the formation of an international mountain research consortium.

  5. Mountain treelines: A roadmap for research orientation

    Science.gov (United States)

    Malanson, George P.; Resler, Lynn M.; Bader, Maaike Y.; Holtmeier, Fredrich-Karl; Butler, David R.; Weiss, Daniel J.; Daniels, Lori D.; Fagre, Daniel B.

    2011-01-01

    For over 100 years, mountain treelines have been the subject of varied research endeavors and remain a strong area of investigation. The purpose of this paper is to examine aspects of the epistemology of mountain treeline research-that is, to investigate how knowledge on treelines has been acquired and the changes in knowledge acquisition over time, through a review of fundamental questions and approaches. The questions treeline researchers have raised and continue to raise have undoubtedly directed the current state of knowledge. A continuing, fundamental emphasis has centered on seeking the general cause of mountain treelines, thus seeking an answer to the question, "What causes treeline?" with a primary emphasis on searching for ecophysiological mechanisms of low-temperature limitation for tree growth and regeneration. However, treeline research today also includes a rich literature that seeks local, landscape-scale causes of treelines and reasons why treelines vary so widely in three-dimensional patterns from one location to the next, and this approach and some of its consequences are elaborated here. In recent years, both lines of research have been motivated greatly by global climate change. Given the current state of knowledge, we propose that future research directions focused on a spatial approach should specifically address cross-scale hypotheses using statistics and simulations designed for nested hierarchies; these analyses will benefit from geographic extension of treeline research.

  6. A lineament analysis of Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Perry, J.J.

    1988-01-01

    The Nuclear Waste Policy Act of 1982 was signed into law on January 7, 1983. It specifies procedures for the Department of Energy in the selection of a high level nuclear waste repository. Federal Environmental Protection Agency standards require adequate isolation of waste from the biosphere for 10,000 years. The law considers such geologic factors as tectonic stability, igneous activity, hydrologic conditions and natural resources to be of primary concern. Yucca Mountain in southern Nevada is one of three sites selected for further consideration in the site characterization process. The Nuclear Waste Project Office (NWPO) within the Agency for Nuclear Projects of the State of Nevada is conducting an independent scientific assessment of the proposed site. The remote sensing technical assessment is one of seven task groups conducting review and research into the suitability of Yucca Mountain. The study undertaken by the Remote Sensing Group was that of a lineament analysis with regard to the site's structural relationship within a regional tectonic framework. Lineaments mapped from synoptic imagery may prove to represent structural zones of weakness. These zones may provide pathways for the infiltration of groundwater, conduits for the extrusion of magma or be reactivated as stress conditions change. This paper describes the methodology for a lineament analysis of the Yucca Mountain area

  7. Physiological demands of downhill mountain biking.

    Science.gov (United States)

    Burr, Jamie F; Drury, C Taylor; Ivey, Adam C; Warburton, Darren E R

    2012-12-01

    Mountain biking is a popular recreational pursuit and the physiological demands of cross-country style riding have been well documented. However, little is known regarding the growing discipline of gravity-assisted downhill cycling. We characterised the physiological demands of downhill mountain biking under typical riding conditions. Riding oxygen consumption (VO(2)) and heart rate (HR) were measured on 11 male and eight female experienced downhill cyclists and compared with data during a standardised incremental to maximum (VO(2max)) exercise test. The mean VO(2) while riding was 23.1 ± 6.9 ml · kg(-1) · min(-1) or 52 ± 14% of VO(2max) with corresponding heart rates of 146 ± 11 bpm (80 ± 6% HRmax). Over 65% of the ride was in a zone at or above an intensity level associated with improvements in health-related fitness. However, the participants' heart rates and ratings of perceived exertion were artificially inflated in comparison with the actual metabolic demands of the downhill ride. Substantial muscular fatigue was evident in grip strength, which decreased 5.4 ± 9.4 kg (5.5 ± 11.2%, P = 0.03) post-ride. Participation in downhill mountain biking is associated with significant physiological demands, which are in a range associated with beneficial effects on health-related fitness.

  8. Yucca Mountain Project bibliography, 1988--1989

    International Nuclear Information System (INIS)

    Lorenz, J.J.

    1990-11-01

    This bibliography contains information on the Yucca Mountain Project that was added to the Department of Energy's Energy Data Base from January 1988 through December 1989. This supplement also includes a new section which provides information about publications on the Energy Data Base that were not sponsored by the project but have some relevance to it. The bibliography is categorized by principal project participating organization. Participant-sponsored subcontractor reports, papers, and articles are included in the sponsoring organization's list. Indexes are provided for Corporate Author, Personal Author, Subject, Contract Number, Report Number, Order Number Correlation, and Key Word in Context. All entries in the Yucca Mountain Project bibliographies are searchable online on the NNW database file. This file can be accessed through the Integrated Technical Information System (ITIS) of the US Department of Energy (DOE). Technical reports on the Yucca Mountain Project are on display in special open files at participating Nevada Libraries and in the Public Document Room of the US Department of Energy, Nevada Operations Office, in Las Vegas

  9. Yucca Mountain and the environmental issue

    International Nuclear Information System (INIS)

    Gertz, C.P.

    1991-01-01

    The scientists and engineers who work on the Yucca Mountain Project keenly feel their responsibility - to solve an important national environmental issue. Addressing the issue of nuclear waste disposal may also help keep the nuclear option viable. Under congressional mandate, they are working to find that solution despite tough opposition from the state of Nevada. Nevada and the US Department of Energy (DOE) have been litigating the issue of environmental permits for almost 2 years now, and the court decisions have all favored DOE. The DOE's site characterization efforts are designed to determine whether Yucca Mountain can safely store spent nuclear fuel for the next 10,000 yr. DOE is studying the rocks, the climate, and the water table to make sure that the site is suitable before anything is built there. The success of the Yucca Mountain Project is vital to settling existing environmental issues as well as maintaining the viability of nuclear energy. Through efforts in Congress and outreach programs in Nevada, DOE hopes to inform the public of the mission and begin the process of site characterization

  10. Floristic study of Khargushan Mountain, Lorestan province

    Directory of Open Access Journals (Sweden)

    Mohammad Mehdi Dehshiri

    2016-09-01

    Full Text Available The aim of this research was plant identification, introduction to the flora, determination of life forms and geographical distribution in Khargushan Mountain. This Mountain, with 6000 hectares, situated on the east of Poldokhtar and south-west of Khorramabad. The maximum altitude of this mountain is thought 2329 m. Plant specimens were collected from different parts of the area during two growing seasons 2013-2014. The plant biological spectrum of the area was plotted by means of life forms results. The position of the area within Iran’s phytogeography classification was studied based on geographical distribution data and references. From 211 identified species in the studied area, 3 Pteridophytes, 1 Gymnosperm, 176 dicotyledons and 31 monocotyledons were presented. These species belong to 50 families and 150 genera. The important families are Fabaceae, Asteraceae, Apiaceae and Lamiaceae with 12.79%, 10.42%, 8.05% and 7.58%, respectively. Life forms of the plant species include Therophytes 36.49%, Hemicryptophytes 31.28%, Cryptophytes 18.96%, Phanerophytes 8.06%, and Chamaephytes 5.21%. 138 species (65.4% were endemics of Irano-Turanian region; 32 species of them were endemics of Iran which among them, distribution of 4 species (Astragalus lurorum, Dionysia gaubae, Hedysarum gypsophilum and Phlomis lurestanica limited to Lorestan province.

  11. Extreme CO2 disturbance and the resilience of soil microbial communities

    Science.gov (United States)

    McFarland, Jack W.; Waldrop, Mark P.; Haw, Monica

    2013-01-01

    Carbon capture and storage (CSS) technology has the potential to inadvertently release large quantities of CO2 through geologic substrates and into surrounding soils and ecosystems. Such a disturbance has the potential to not only alter the structure and function of plant and animal communities, but also soils, soil microbial communities, and the biogeochemical processes they mediate. At Mammoth Mountain, we assessed the soil microbial community response to CO2 disturbance (derived from volcanic ‘cold’ CO2) that resulted in localized tree kill; soil CO2 concentrations in our study area ranged from 0.6% to 60%. Our objectives were to examine how microbial communities and their activities are restructured by extreme CO2 disturbance, and assess the response of major microbial taxa to the reintroduction of limited plant communities following an extensive period (15–20 years) with no plants. We found that CO2-induced tree kill reduced soil carbon (C) availability along our sampling transect. In response, soil microbial biomass decreased by an order of magnitude from healthy forest to impacted areas. Soil microorganisms were most sensitive to changes in soil organic C, which explained almost 60% of the variation for microbial biomass C (MBC) along the CO2gradient. We employed phospholipid fatty acid analysis and quantitative PCR (qPCR) to determine compositional changes among microbial communities in affected areas and found substantial reductions in microbial biomass linked to the loss of soil fungi. In contrast, archaeal populations responded positively to the CO2 disturbance, presumably due to reduced competition of bacteria and fungi, and perhaps unique adaptations to energy stress. Enzyme activities important in the cycling of soil C, nitrogen (N), and phosphorus (P) declined with increasing CO2, though specific activities (per unit MBC) remained stable or increased suggesting functional redundancy among restructured communities. We conclude that both the

  12. Implementation of Localized Corrosion in the Performance Assessment Model for Yucca Mountain

    International Nuclear Information System (INIS)

    Vivek Jain, S.; David Sevougian; Patrick D. Mattie; Kevin G. Mon; Robert J. Mackinnon

    2006-01-01

    A total system performance assessment (TSPA) model has been developed to analyze the ability of the natural and engineered barriers of the Yucca Mountain repository to isolate nuclear waste over the 10,000-year period following repository closure. The principal features of the engineered barrier system (EBS) are emplacement tunnels (or ''drifts'') containing a two-layer waste package (WP) for waste containment and a titanium drip shield to protect the waste package from seeping water and falling rock, The 20-mm-thick outer shell of the WP is composed of Alloy 22, a highly corrosion-resistant nickel-based alloy. The barrier function of the EBS is to isolate the waste from migrating water. The water and its associated chemical conditions eventually lead to degradation of the waste packages and mobilization of the radionuclides within the packages. There are five possible waste package degradation modes of the Alloy 22: general corrosion, microbially influenced corrosion, stress corrosion cracking, early failure due to manufacturing defects, and localized corrosion. This paper specifically examines the incorporation of the Alloy-22 localized corrosion model into the Yucca Mountain TSPA model, particularly the abstraction and modeling methodology, as well as issues dealing with scaling, spatial variability, uncertainty, and coupling to other sub-models that are part of the total system model

  13. Aerobic biodegradation potential of endocrine-disrupting chemicals in surface-water sediment at Rocky Mountain National Park, USA.

    Science.gov (United States)

    Bradley, Paul M; Battaglin, William A; Iwanowicz, Luke R; Clark, Jimmy M; Journey, Celeste A

    2016-05-01

    Endocrine-disrupting chemicals (EDCs) in surface water and bed sediment threaten the structure and function of aquatic ecosystems. In natural, remote, and protected surface-water environments where contaminant releases are sporadic, contaminant biodegradation is a fundamental driver of exposure concentration, timing, duration, and, thus, EDC ecological risk. Anthropogenic contaminants, including known and suspected EDCs, were detected in surface water and sediment collected from 2 streams and 2 lakes in Rocky Mountain National Park (Colorado, USA). The potential for aerobic EDC biodegradation was assessed in collected sediments using 6 (14) C-radiolabeled model compounds. Aerobic microbial mineralization of natural (estrone and 17β-estradiol) and synthetic (17α-ethinylestradiol) estrogen was significant at all sites. Bed sediment microbial communities in Rocky Mountain National Park also effectively degraded the xenoestrogens bisphenol-A and 4-nonylphenol. The same sediment samples exhibited little potential for aerobic biodegradation of triclocarban, however, illustrating the need to assess a wider range of contaminant compounds. The present study's results support recent concerns over the widespread environmental occurrence of carbanalide antibacterials, like triclocarban and triclosan, and suggest that backcountry use of products containing these compounds should be discouraged. Published 2015 Wiley Periodicals Inc. on behalf of SETAC. This article is a US Government work and, as such, is in the public domain in the United States of America.

  14. Predictive Understanding of Mountainous Watershed Hydro-Biogeochemical Function and Response to Perturbations

    Science.gov (United States)

    Hubbard, S. S.; Williams, K. H.; Agarwal, D.; Banfield, J. F.; Beller, H. R.; Bouskill, N.; Brodie, E.; Maxwell, R. M.; Nico, P. S.; Steefel, C. I.; Steltzer, H.; Tokunaga, T. K.; Wainwright, H. M.; Dwivedi, D.; Newcomer, M. E.

    2017-12-01

    Recognizing the societal importance, vulnerability and complexity of mountainous watersheds, the `Watershed Function' project is developing a predictive understanding of how mountainous watersheds retain and release downgradient water, nutrients, carbon, and metals. In particular, the project is exploring how early snowmelt, drought, floods and other disturbances will influence mountainous watershed dynamics at seasonal to decadal timescales. Located in the 300km2 East River headwater catchment of the Upper Colorado River Basin, the project is guided by several constructs. First, the project considers the integrated role of surface and subsurface flow and biogeochemical reactions - from bedrock to the top of the vegetative canopy, from terrestrial through aquatic compartments, and from summit to receiving waters. The project takes a system-of-systems perspective, focused on developing new methods to quantify the cumulative watershed hydrobiogeochemical response to perturbations based on information from select subsystems within the watershed, each having distinct vegetation-subsurface biogeochemical-hydrological characteristics. A `scale-adaptive' modeling capability, in development using adaptive mesh refinement methods, serves as the organizing framework for the SFA. The scale-adaptive approach is intended to permit simulation of system-within-systems behavior - and aggregation of that behavior - from genome through watershed scales. This presentation will describe several early project discoveries and advances made using experimental, observational and numerical approaches. Among others, examples may include:quantiying how seasonal hydrological perturbations drive biogeochemical responses across critical zone compartments, with a focus on N and C transformations; metagenomic documentation of the spatial variability in floodplain meander microbial ecology; 3D reactive transport simulations of couped hydrological-biogeochemical behavior in the hyporheic zone; and

  15. Toward Understanding, Managing, and Protecting Microbial Ecosystems

    Science.gov (United States)

    Bodelier, Paul L. E.

    2011-01-01

    Microbial communities are at the very basis of life on earth, catalyzing biogeochemical reactions driving global nutrient cycles. However, unlike for plants and animals, microbial diversity is not on the biodiversity–conservation agenda. The latter, however, would imply that microbial diversity is not under any threat by anthropogenic disturbance or climate change. This maybe a misconception caused by the rudimentary knowledge we have concerning microbial diversity and its role in ecosystem functioning. This perspective paper identifies major areas with knowledge gaps within the field of environmental microbiology that preclude a comprehension of microbial ecosystems on the level we have for plants and animals. Opportunities and challenges are pointed out to open the microbial black box and to go from descriptive to predictive microbial ecology. PMID:21747797

  16. Towards understanding, managing and protecting microbial ecosystems

    Directory of Open Access Journals (Sweden)

    Paul eBodelier

    2011-04-01

    Full Text Available Microbial communities are at the very basis of life on earth, catalysing biogeochemical reactions driving global nutrient cycles. However, unlike for plants and animals, microbial diversity is not on the biodiversity conservation agenda. The latter, however, would imply that microbial diversity is not under any threat by anthropogenic disturbance or climate change. This maybe a misconception caused by the rudimentary knowledge we have concerning microbial diversity and its role in ecosystem functioning. This perspective paper indentifies major areas with knowledge gaps within the field of environmental microbiology that preclude a comprehension of microbial ecosystems on the level we have for plants and animals. Opportunities and challenges are pointed out to open the microbial black box and to go from descriptive to predictive microbial ecology.

  17. Toward understanding, managing, and protecting microbial ecosystems.

    Science.gov (United States)

    Bodelier, Paul L E

    2011-01-01

    Microbial communities are at the very basis of life on earth, catalyzing biogeochemical reactions driving global nutrient cycles. However, unlike for plants and animals, microbial diversity is not on the biodiversity-conservation agenda. The latter, however, would imply that microbial diversity is not under any threat by anthropogenic disturbance or climate change. This maybe a misconception caused by the rudimentary knowledge we have concerning microbial diversity and its role in ecosystem functioning. This perspective paper identifies major areas with knowledge gaps within the field of environmental microbiology that preclude a comprehension of microbial ecosystems on the level we have for plants and animals. Opportunities and challenges are pointed out to open the microbial black box and to go from descriptive to predictive microbial ecology.

  18. Lithospheric Strength Beneath the Zagros Mountains of Southwestern Iran

    Science.gov (United States)

    Adams, A. N.; Nyblade, A.; Brazier, R.; Rodgers, A.; Al-Amri, A.

    2006-05-01

    The Zagros Mountain Belt of southwestern Iran is among the most seismically active mountain belts in the world. Early seismic studies of this area found that the lithosphere underlying the Zagros Mountains follows the "jelly sandwich" model, having a strong upper crust and a strong lithospheric mantle, separated by a weak lower crust. More recent studies, which analyzed earthquakes originating within the Zagros Mountains that were recorded at teleseismic distances, however, found that these earthquakes occurred only within the upper crust, thus indicating that the strength of the Zagros Mountains' lithosphere lies only within the upper crust, in accordance with the "creme brulee" lithospheric model. Preliminary analysis of regionally recorded earthquakes that originated within the Zagros Mountains is presented here. Using earthquakes recorded at regional distances will allow the analysis of a larger dataset than has been used in previous studies. Preliminary results show earthquakes occurring throughout the crust and possibly extending into the upper mantle.

  19. Review article: The mountain motif in the plot of Matthew

    Directory of Open Access Journals (Sweden)

    Gert J. Volschenk

    2010-09-01

    Full Text Available This article reviewed T.L. Donaldson’s book, Jesus on the mountain: A study in Matthean theology, published in 1985 by JSOT Press, Sheffield, and focused on the mountain motif in the structure and plot of the Gospel of Matthew, in addition to the work of Donaldson on the mountain motif as a literary motif and as theological symbol. The mountain is a primary theological setting for Jesus’ ministry and thus is an important setting, serving as one of the literary devices by which Matthew structured and progressed his narrative. The Zion theological and eschatological significance and Second Temple Judaism serve as the historical and theological background for the mountain motif. The last mountain setting (Mt 28:16–20 is the culmination of the three theological themes in the plot of Matthew, namely Christology, ecclesiology and salvation history.

  20. Stratigraphic and structural framework of Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Spengler, R.W.; Fox, K.F. Jr.

    1988-01-01

    Yucca Mountain is located within the southwestern Nevada volcanic field, ∼140 km northwest of Las Vegas, Nevada, and 50 km northeast of Death Valley, California. The mountain consist of a series of long, linear, north-trending volcanic ridges that approach an 1800-m maximum elevation near The Prow. The broad intermontane alluviated valleys of Crater Flat, the Amargosa Desert, and Jackass Flats, averaging 800 to 1100 m in elevation, form the western, southern, and eastern margins of Yucca Mountain, respectively. North of The Prow, Yucca Mountain merges with other volcanic highlands that flank the southern rim of the Timber Mountain-Oasis Valley caldera complex. The stratigraphy and structure of the area are discussed. Future geologic studies will attempt to determine if faults extend beneath Yucca Mountain, and, if present, their potential effects on the hydrologic and tectonic regimes

  1. Geology of Gable Mountain-Gable Butte Area

    International Nuclear Information System (INIS)

    Fecht, K.R.

    1978-09-01

    Gable Mountain and Gable Butte are two ridges which form the only extensive outcrops of the Columbia River Basalt Group in the central portion of the Pasco Basin. The Saddle Mountains Basalt and two interbedded sedimentary units of the Ellensburg Formation crop out on the ridges. These include, from oldest to youngest, the Asotin Member (oldest), Esquatzel Member, Selah Interbed, Pomona Member, Rattlesnake Ridge Interbed, and Elephant Mountain Member (youngest). A fluvial plain composed of sediments from the Ringold and Hanford (informal) formations surrounds these ridges. The structure of Gable Mountain and Gable Butte is dominated by an east-west-trending major fold and northwest-southeast-trending parasitic folds. Two faults associated with the uplift of these structures were mapped on Gable Mountain. The geomorphic expression of the Gable Mountain-Gable Butte area resulted from the comlex folding and subsequent scouring by post-basalt fluvial systems

  2. Symposium 9: Rocky Mountain futures: preserving, utilizing, and sustaining Rocky Mountain ecosystems

    Science.gov (United States)

    Baron, Jill S.; Seastedt, Timothy; Fagre, Daniel B.; Hicke, Jeffrey A.; Tomback, Diana; Garcia, Elizabeth; Bowen, Zachary H.; Logan, Jesse A.

    2013-01-01

    In 2002 we published Rocky Mountain Futures, an Ecological Perspective (Island Press) to examine the cumulative ecological effects of human activity in the Rocky Mountains. We concluded that multiple local activities concerning land use, hydrologic manipulation, and resource extraction have altered ecosystems, although there were examples where the “tyranny of small decisions” worked in a positive way toward more sustainable coupled human/environment interactions. Superimposed on local change was climate change, atmospheric deposition of nitrogen and other pollutants, regional population growth, and some national management policies such as fire suppression.

  3. Microbial Metabolism in Serpentinite Fluids

    Science.gov (United States)

    Crespo-Medina, M.; Brazelton, W. J.; Twing, K. I.; Kubo, M.; Hoehler, T. M.; Schrenk, M. O.

    2013-12-01

    Serpentinization is the process in which ultramafic rocks, characteristic of the upper mantle, react with water liberating mantle carbon and reducing power to potenially support chemosynthetic microbial communities. These communities may be important mediators of carbon and energy exchange between the deep Earth and the surface biosphere. Our work focuses on the Coast Range Ophiolite Microbial Observatory (CROMO) in Northern California where subsurface fluids are accessible through a series of wells. Preliminary analyses indicate that the highly basic fluids (pH 9-12) have low microbial diversity, but there is limited knowledge about the metabolic capabilities of these communties. Metagenomic data from similar serpentine environments [1] have identified Betaproteobacteria belonging to the order Burkholderiales and Gram-positive bacteria from the order Clostridiales as key components of the serpentine microbiome. In an effort to better characterize the microbial community, metabolism, and geochemistry at CROMO, fluids from two representative wells (N08B and CSWold) were sampled during recent field campaigns. Geochemical characterization of the fluids includes measurements of dissolved gases (H2, CO, CH4), dissolved inorganic and organic carbon, volatile fatty acids, and nutrients. The wells selected can be differentiated in that N08B had higher pH (10-11), lower dissolved oxygen, and cell counts ranging from 105-106 cells mL-1 of fluid, with an abundance of the betaproteobacterium Hydrogenophaga. In contrast, fluids from CSWold have slightly lower pH (9-9.5), DO, and conductivity, as well as higher TDN and TDP. CSWold fluid is also characterized for having lower cell counts (~103 cells mL-1) and an abundance of Dethiobacter, a taxon within the phylum Clostridiales. Microcosm experiments were conducted with the purpose of monitoring carbon fixation, methanotrophy and metabolism of small organic compounds, such as acetate and formate, while tracing changes in fluid

  4. Key Concepts in Microbial Oceanography

    Science.gov (United States)

    Bruno, B. C.; Achilles, K.; Walker, G.; Weersing, K.; Team, A

    2008-12-01

    The Center for Microbial Oceanography: Research and Education (C-MORE) is a multi-institution Science and Technology Center, established by the National Science Foundation in 2006. C-MORE's research mission is to facilitate a more comprehensive understanding of the diverse assemblages of microorganisms in the sea, ranging from the genetic basis of marine microbial biogeochemistry including the metabolic regulation and environmental controls of gene expression, to the processes that underpin the fluxes of carbon, related bioelements, and energy in the marine environment. The C-MORE education and outreach program is focused on increasing scientific literacy in microbial oceanography among students, educators, and the general public. A first step toward this goal is defining the key concepts that constitute microbial oceanography. After lengthy discussions with scientists and educators, both within and outside C-MORE, we have arrived at six key concepts: 1) Marine microbes are very small and have been around for a long time; 2) Life on Earth could not exist without microbes; 3) Most marine microbes are beneficial; 4) Microbes are everywhere: they are extremely abundant and diverse; 5) Microbes significantly impact our global climate; and 6) There are new discoveries every day in the field of microbial oceanography. A C-MORE-produced brochure on these six key concepts will be distributed at the meeting. Advanced copies may be requested by email or downloaded from the C-MORE web site(http://cmore.soest.hawaii.edu/downloads/MO_key_concepts_hi-res.pdf). This brochure also includes information on career pathways in microbial oceanography, with the aim of broadening participation in the field. C-MORE is eager to work in partnership to incorporate these key concepts into other science literacy publications, particularly those involving ocean and climate literacy. We thank the following contributors and reviewers: P Chisholm, A Dolberry, and A Thompson (MIT); N Lawrence

  5. Enhancing microbial production of biofuels by expanding microbial metabolic pathways.

    Science.gov (United States)

    Yu, Ping; Chen, Xingge; Li, Peng

    2017-09-01

    Fatty acid, isoprenoid, and alcohol pathways have been successfully engineered to produce biofuels. By introducing three genes, atfA, adhE, and pdc, into Escherichia coli to expand fatty acid pathway, up to 1.28 g/L of fatty acid ethyl esters can be achieved. The isoprenoid pathway can be expanded to produce bisabolene with a high titer of 900 mg/L in Saccharomyces cerevisiae. Short- and long-chain alcohols can also be effectively biosynthesized by extending the carbon chain of ketoacids with an engineered "+1" alcohol pathway. Thus, it can be concluded that expanding microbial metabolic pathways has enormous potential for enhancing microbial production of biofuels for future industrial applications. However, some major challenges for microbial production of biofuels should be overcome to compete with traditional fossil fuels: lowering production costs, reducing the time required to construct genetic elements and to increase their predictability and reliability, and creating reusable parts with useful and predictable behavior. To address these challenges, several aspects should be further considered in future: mining and transformation of genetic elements related to metabolic pathways, assembling biofuel elements and coordinating their functions, enhancing the tolerance of host cells to biofuels, and creating modular subpathways that can be easily interconnected. © 2016 International Union of Biochemistry and Molecular Biology, Inc.

  6. Conservation of biodiversity in mountain ecosystems -- At a glance

    OpenAIRE

    MacKinnon, K.

    2002-01-01

    Metadata only record Mountains are especially important for biodiversity conservation since many harbor unique assemblages of plants and animals, including high levels of endemic species. Mountain biodiversity and natural habitats bestow multiple ecosystem, soil conservation, and watershed benefits. Mountains are often centers of endemism, where species are prevalent in or peculiar to a particular region, and Pleistocene refuges, which are hypothesized to have high levels of diversity wher...

  7. THE MOUNTAIN REGIONS IN CONTEXT OF STRATEGY 2020

    Directory of Open Access Journals (Sweden)

    ANTONESCU Daniela

    2014-07-01

    Full Text Available The mountain regions in Romania and European Union represent a special territory of interest, with a huge economic, social, environmental and cultural potential. More, mountain area is considerate a natural-economic region and constitutes an important objective for regional development policy. The main sectors of mountain area are presented in agriculture and tourism fields that lead the key role in safeguarding the sensitive eco-system and thereby maintaining the general living and working space.Mountain areas should have a specific policy defined by the sustainable development principle, which meets the needs of the present without compromising the opportunities of future generations. The specific mountain policy aims to reduce the imbalance between favored and disadvantaged mountain regions, permanently marked by natural, economic, social, cultural and environmental constraints. In previous programming period, mountain regions among have profited from the intensive regional support, in specially, for constructing of and connecting them to fresh water and waste water networks, in particular for increasing of life quality. In context of 2020 Strategy, the Member States will concentrate investments on a small number of thematic objectives. In advanced regions, 60 % of funds will used for only two of these objectives (competitiveness of SME and research/innovation. The all less developed regions will received about 50% of Structural Funds In Romania, mountain representing 29.93% out of the total national surface and 20.14% from UAA (Utilised Agricultural Area of total national. The mountain territory has around 20% of the national population and is overlapping almost 100% with the Carpathian Mountains. Due to these conditions, Romania's regional development policy must take into account the specificities of mountain area, the problems they faced, and the requirements of 2020 Strategy.This paper presents the main aspects to be taken into account

  8. Mountaineering and photography. Contacts between 1880 and 1940

    Directory of Open Access Journals (Sweden)

    Maria Andorno

    2014-12-01

    Full Text Available Since the second half of the nineteenth century, the photograph produced in high altitude mountain (mountaineering photography gives rise to peculiar images that do not belong to the tradition of landscape painting. Mountaineering is similar to the art of performance, if we talk about physical and mental commitment. Therefore, photos taken during the ascent of a peak shows both conceptual and formal values.

  9. Yucca Mountain Site characterization project bibliography, January--June 1991

    International Nuclear Information System (INIS)

    1992-06-01

    Following a reorganization of the Office of Civilian Radioactive Waste Management in 1990, the Yucca Mountain Project was renamed Yucca Mountain Site Characterization Project. The title of this bibliography was also changed to Yucca Mountain Site Characterization Project Bibliography. Prior to August 5, 1988, this project was called the Nevada Nuclear Waste Storage Investigations. This bibliography contains information on this ongoing project that was added to the Department of Energy's Science and Technology Database from January 1, 1990, through December 31, 1991

  10. When CO2 kills: effects of magmatic CO2 flux on belowground biota at Mammoth Mountain, CA

    Science.gov (United States)

    McFarland, J.; Waldrop, M. P.; Mangan, M.

    2011-12-01

    The biomass, composition, and activity of the soil microbial community is tightly linked to the composition of the aboveground plant community. Microorganisms in aerobic surface soils, both free-living and plant-associated are largely structured by the availability of growth limiting carbon (C) substrates derived from plant inputs. When C availability declines following a catastrophic event such as the death of large swaths of trees, the number and composition of microorganisms in soil would be expected to decline and/or shift to unique microorganisms that have better survival strategies under starvation conditions. High concentrations of volcanic cold CO2 emanating from Mammoth Mountain near Horseshoe Lake on the southwestern edge of Long Valley Caldera, CA has resulted in a large kill zone of tree species, and associated soil microbial species. In July 2010, we assessed belowground microbial community structure in response to disturbance of the plant community along a gradient of soil CO2 concentrations grading from 80% (no plant life). We employed a microbial community fingerprinting technique (automated ribosomal intergenic spacer analysis) to determine changes in overall community composition for three broad functional groups: fungi, bacteria, and archaea. To evaluate changes in ectomycorrhizal fungal associates along the CO2 gradient, we harvested root tips from lodgepole pine seedlings collected in unaffected forest as well as at the leading edge of colonization into the kill zone. We also measured soil C fractions (dissolved organic C, microbial biomass C, and non-extractable C) at 10 and 30 cm depth, as well as NH4+. Not surprisingly, our results indicate a precipitous decline in soil C, and microbial C with increasing soil CO2; phospholipid fatty acid analysis in conjunction with community fingerprinting indicate both a loss of fungal diversity as well as a dramatic decrease in biomass as one proceeds further into the kill zone. This observation was

  11. Mountain tourism development in Serbia and neighboring countries

    Directory of Open Access Journals (Sweden)

    Krunić Nikola

    2010-01-01

    Full Text Available Mountain areas with their surroundings are important parts of tourism regions with potentials for all-season tourism development and complementary activities. Development possibilities are based on size of high mountain territory, nature protection regimes, infrastructural equipment, provided conditions for leisure and recreation as well as involvement of local population in processes of development and protection. This paper analyses the key aspects of tourism development, winter tourism in high-mountain areas of Serbia and some neighboring countries (Slovakia, Romania, Bulgaria, and Greece. Common determinants of cohesion between nature protection and mountain tourism development, national development policies, applied models and concepts and importance of trans-border cooperation are indicated.

  12. Turonian Radiolarians in the Section of Ak Mountain, Crimea

    Science.gov (United States)

    Bragina, L. G.

    2018-01-01

    In the sections from the western and eastern peaks of Ak Mountain, the Patellula selbukhraensis Zone (upper part of the lower Turonian), which is established for the first time in the southwestern Mountainous Crimea, is traced. The first data on the radiolarian distribution in the section of the eastern peak of Ak Mountain, which is stratotypical of the Phaseliforma turovi (middle Turonian, without the upper part) and Actinomma (?) belbekense (upper part of the middle Turonian-upper Turonian) zones, are presented. These zones are also traced in the parallel section of the western peak of Ak Mountain.

  13. Microbial Flocculant for Nature Soda

    Energy Technology Data Exchange (ETDEWEB)

    Qin, Peiyong; Zhang, Tong; Chen, Cuixian

    2004-03-31

    Microbial flocculant for nature soda has been studied. Lactobacillus TRJ21, which was able to produce an excellent biopolymer flocculant for nature soda, was obtained in our lab. The microbial flocculant was mainly produced when the bacteria laid in stationary growth phase. Fructose or glucose, as carbon sources, were more favorable for the bacterial growth and flocculant production. The bacteria was able to use ammonium sulfate or Urea as nitrogen to produce flocculant, but was not able to use peptone effectively. High C/N ratio was more favorable to Lactobacillus TRJ21 growth and flocculant production than low C/N ratio. The biopolymer flocculant was mainly composed of polysaccharide and protein with a molecular weight 1.38x106 by gel permeation chromatography. It was able to be easily purified from the culture medium by acetone. Protein in the flocculant was tested for the flocculating activity ingredient by heating the flocculant.

  14. Subsurface microbial habitats on Mars

    Science.gov (United States)

    Boston, P. J.; Mckay, C. P.

    1991-01-01

    We developed scenarios for shallow and deep subsurface cryptic niches for microbial life on Mars. Such habitats could have considerably prolonged the persistence of life on Mars as surface conditions became increasingly inhospitable. The scenarios rely on geothermal hot spots existing below the near or deep subsurface of Mars. Recent advances in the comparatively new field of deep subsurface microbiology have revealed previously unsuspected rich aerobic and anaerobic microbal communities far below the surface of the Earth. Such habitats, protected from the grim surface conditions on Mars, could receive warmth from below and maintain water in its liquid state. In addition, geothermally or volcanically reduced gases percolating from below through a microbiologically active zone could provide the reducing power needed for a closed or semi-closed microbial ecosystem to thrive.

  15. Laser engineering of microbial systems

    Science.gov (United States)

    Yusupov, V. I.; Gorlenko, M. V.; Cheptsov, V. S.; Minaev, N. V.; Churbanova, E. S.; Zhigarkov, V. S.; Chutko, E. A.; Evlashin, S. A.; Chichkov, B. N.; Bagratashvili, V. N.

    2018-06-01

    A technology of laser engineering of microbial systems (LEMS) based on the method of laser-induced transfer of heterogeneous mixtures containing microorganisms (laser bioprinting) is described. This technology involves laser printing of soil microparticles by focusing near-infrared laser pulses on a specially prepared gel/soil mixture spread onto a gold-coated glass plate. The optimal range of laser energies from the point of view of the formation of stable jets and droplets with minimal negative impact on living systems of giant accelerations, laser pulse irradiation, and Au nanoparticles was found. Microsamples of soil were printed on glucose-peptone-yeast agar plates to estimate the LEMS process influence on structural and morphological microbial diversity. The obtained results were compared with traditionally treated soil samples. It was shown that LEMS technology allows significantly increasing the biodiversity of printed organisms and is effective for isolating rare or unculturable microorganisms.

  16. Theory of microbial genome evolution

    Science.gov (United States)

    Koonin, Eugene

    Bacteria and archaea have small genomes tightly packed with protein-coding genes. This compactness is commonly perceived as evidence of adaptive genome streamlining caused by strong purifying selection in large microbial populations. In such populations, even the small cost incurred by nonfunctional DNA because of extra energy and time expenditure is thought to be sufficient for this extra genetic material to be eliminated by selection. However, contrary to the predictions of this model, there exists a consistent, positive correlation between the strength of selection at the protein sequence level, measured as the ratio of nonsynonymous to synonymous substitution rates, and microbial genome size. By fitting the genome size distributions in multiple groups of prokaryotes to predictions of mathematical models of population evolution, we show that only models in which acquisition of additional genes is, on average, slightly beneficial yield a good fit to genomic data. Thus, the number of genes in prokaryotic genomes seems to reflect the equilibrium between the benefit of additional genes that diminishes as the genome grows and deletion bias. New genes acquired by microbial genomes, on average, appear to be adaptive. Evolution of bacterial and archaeal genomes involves extensive horizontal gene transfer and gene loss. Many microbes have open pangenomes, where each newly sequenced genome contains more than 10% `ORFans', genes without detectable homologues in other species. A simple, steady-state evolutionary model reveals two sharply distinct classes of microbial genes, one of which (ORFans) is characterized by effectively instantaneous gene replacement, whereas the other consists of genes with finite, distributed replacement rates. These findings imply a conservative estimate of at least a billion distinct genes in the prokaryotic genomic universe.

  17. [Life cycles of ground beetles (Coleoptera, Carabidae) from the mountain taiga and mountain forest-steppe in the Eastern Sayan].

    Science.gov (United States)

    Khobrakova, L Ts; Sharova, I Kh

    2005-01-01

    Seasonal dynamics and demographic structure was studied in 15 dominant ground beetle species in the mountain taiga and mountain forest-steppe belts of the Eastern Sayan (Okinskoe Plateau). Life cycles of the dominant ground beetle species were classified by developmental time, seasonal dynamics, and intrapopulation groups with different reproduction timing. The strategies of carabid life cycles adapted to severe mountain conditions of the Eastern Sayan were revealed.

  18. Microbial terroir for wine grapes

    Energy Technology Data Exchange (ETDEWEB)

    Gilbert, J. A.; van der Lelie, D.; Zarraonaindia, I.

    2013-12-05

    The viticulture industry has been selectively growing vine cultivars with different traits (grape size, shape, color, flavor, yield of fruit, and so forth) for millennia, and small variations in soil composition, water management, climate, and the aspect of vineyards have long been associated with shifts in these traits. As such, many different clonal varieties of vines exist, even within given grape varieties, such as merlot, pinot noir, and chardonnay. The commensal microbial flora that coexists with the plant may be one of the key factors that influence these traits. To date, the role of microbes has been largely ignored, outside of microbial pathogens, mainly because the technologies did not exist to allow us to look in any real depth or breadth at the community structure of the multitudes of bacterial and fungal species associated with each plant. In PNAS, Bokulich et al. (1) used next-generation sequencing of 16S rRNA and internal transcribed spacer ribosomal sequence to determine the relative abundances of bacteria and fungi, respectively, from grape must (freshly pressed grape juice, containing the skins and seeds) from plants in eight vineyards representing four of the major wine growing regions in California. The authors show that the microbiomes (bacterial and fungal taxonomic structure) associated with this early fermentation stage show defined biogeography, illustrating that different wine-growing regions maintain different microbial communities, with some influences from the grape variety and the year of production.

  19. Mountain pine beetles colonizing historical and naive host trees are associated with a bacterial community highly enriched in genes contributing to terpene metabolism.

    Science.gov (United States)

    Adams, Aaron S; Aylward, Frank O; Adams, Sandye M; Erbilgin, Nadir; Aukema, Brian H; Currie, Cameron R; Suen, Garret; Raffa, Kenneth F

    2013-06-01

    The mountain pine beetle, Dendroctonus ponderosae, is a subcortical herbivore native to western North America that can kill healthy conifers by overcoming host tree defenses, which consist largely of high terpene concentrations. The mechanisms by which these beetles contend with toxic compounds are not well understood. Here, we explore a component of the hypothesis that beetle-associated bacterial symbionts contribute to the ability of D. ponderosae to overcome tree defenses by assisting with terpene detoxification. Such symbionts may facilitate host tree transitions during range expansions currently being driven by climate change. For example, this insect has recently breached the historical geophysical barrier of the Canadian Rocky Mountains, providing access to näive tree hosts and unprecedented connectivity to eastern forests. We use culture-independent techniques to describe the bacterial community associated with D. ponderosae beetles and their galleries from their historical host, Pinus contorta, and their more recent host, hybrid P. contorta-Pinus banksiana. We show that these communities are enriched with genes involved in terpene degradation compared with other plant biomass-processing microbial communities. These pine beetle microbial communities are dominated by members of the genera Pseudomonas, Rahnella, Serratia, and Burkholderia, and the majority of genes involved in terpene degradation belong to these genera. Our work provides the first metagenome of bacterial communities associated with a bark beetle and is consistent with a potential microbial contribution to detoxification of tree defenses needed to survive the subcortical environment.

  20. Relief Evolution in Tectonically Active Mountain Ranges

    Science.gov (United States)

    Whipple, Kelin X.

    2004-01-01

    The overall aims of this 3-yr project, as originally proposed were to: (1) investigate quantitatively the roles of fluvial and glacial erosion in the evolution of relief in mountainous regions, and (2) test rigorously the quality and accuracy of SRTM topographic data in areas of rugged relief - both the most challenging and of greatest interest to geomorphic, neotectonic, and hazards applications. Natural laboratories in both the western US and the Southern Alps of New Zealand were identified as most promising. The project has been both successful and productive, despite the fact that no SRTM data for our primary field sites in New Zealand were released on the time frame of the work effort. Given the delayed release of SRTM data, we pursued the scientific questions of the roles of fluvial and, especially, glacial erosion in the evolution of relief in mountainous regions using available digital elevation models (DEMs) for the Southern Alps of New Zealand (available at both 25m and 50m pixel sizes), and USGS 10m and 30m DEMs within the Western US. As emphasized in the original proposal, we chose the emphasis on the role of glacial modification of topographic relief because there has been little quantitative investigation of glacial erosion processes at landscape scale. This is particularly surprising considering the dramatic sculpting of most mid- and high-latitude mountain ranges, the prodigious quantities of glacially-derived sediment in terrestrial and marine basins, and the current cross-disciplinary interest in the role of denudational processes in orogenesis and the evolution of topography in general. Moreover, the evolution of glaciated landscapes is not only a fundamental problem in geomorphology in its own right, but also is at the heart of the debate over Late Cenozoic linkages between climate and tectonics.

  1. Preparing the Yucca Mountain Multimedia Presentation

    International Nuclear Information System (INIS)

    Larkin, Y.; Hartley, J.; Scott, J.

    2002-01-01

    In July 2002, the U.S. Congress approved Yucca Mountain in Nevada for development as a geologic repository for spent nuclear fuel and high-level radioactive waste. This major milestone for the country's high-level radioactive waste disposal program comes after more than 20 years of scientific study and intense public interaction and outreach. The U.S. Department of Energy's (DOE) public involvement activities were driven by two federal regulations-the National Environmental Policy Act (NEPA) and the Nuclear Waste Policy Act (NWPA) of 1982, as amended. The NEPA required that DOE hold public hearings at key points in the development of an Environmental Impact Statement (EIS) and the NWPA required the agency to conduct public hearings in the vicinity of the site prior to making a recommendation regarding the site's suitability. The NWPA also provided a roadmap for how DOE would interact with affected units of government, which include the state of Nevada and the counties surrounding the site. As the Project moves into the next phase--applying for a license to construct a repository-the challenge of public interaction and outreach remains. It has become increasingly important to provide tools to communicate to the public the importance of the Yucca Mountain Project. Sharing the science and engineering research with the general public, as well as teachers, students, and industry professionals, is one of the project's most important activities. Discovering ways to translate project information and communicate this information to local governments, agencies, citizens' groups, schools, the news media, and other stakeholders is critical. With these facts in mind, the authors set out to create a presentation that would bring the ''mountain'' to the public

  2. The Occurrence of Erionite at Yucca Mountain

    International Nuclear Information System (INIS)

    NA

    2004-01-01

    The naturally-occurring zeolite mineral erionite has a fibrous morphology and is a known human carcinogen (inhalation hazard). Erionite has been found typically in very small quantities and restricted occurrences in the course of mineralogic characterization of Yucca Mountain as a host for a high-level nuclear waste repository. The first identification of erionite was made in 1984 on the basis of morphology and chemical composition and later confirmed by X-ray diffraction analysis. It was found in the lower vitrophyre (Tptpv3) of the Topopah Spring Tuff in a borehole sidewall sample. Most erionite occurrences identified at Yucca Mountain are in the Topopah Spring Tuff, within an irregular zone of transition between the lower boundary of devitrified tuff and underlying glassy tuff. This zone is fractured and contains intermingled devitrified and vitric tuff. In 1997, a second host of erionite mineralization was identified in the Exploratory Studies Facility within and adjacent to a high-angle fracture/breccia zone transgressing the boundary between the lowermost devitrified tuff (Tpcplnc) and underlying moderately welded vitric tuff (Tpcpv2) of the Tiva Canyon Tuff. The devitrified-vitric transition zones where erionite is found tend to have complex secondary-mineral assemblages, some of very localized occurrence. Secondary minerals in addition to erionite may include smectite, heulandite-clinoptilolite, chabazite, opal-A, opal-CT, cristobalite, quartz, kenyaite, and moganite. Incipient devitrification within the Topopah Spring Tuff transition zone includes patches that are highly enriched in potassium feldspar relative to the precursor volcanic glass. Geochemical conditions during glass alteration may have led to local evolution of potassium-rich fluids. Thermodynamic modeling of zeolite stability shows that erionite and chabazite stability fields occur only at aqueous K concentrations much higher than in present Yucca Mountain waters. The association of erionite

  3. Mountaineering-induced bilateral plantar paresthesia.

    Science.gov (United States)

    Henderson, Kyle K; Parker, Justine; Heinking, Kurt P

    2014-07-01

    Flat feet (pes planus) have been implicated in multiple musculoskeletal complaints, which are often exacerbated by lack of appropriate arch support or intense exercise. To investigate the efficacy of osteopathic manipulative treatment (OMT) on a patient (K.K.H.) with mountaineering-induced bilateral plantar paresthesia and to assess the association of pes planus with paresthesia in members of the mountaineering expedition party that accompanied the patient. A patient history and physical examination of the musculoskeletal system were performed. The hindfoot, midfoot, forefoot, big toe, and distal toes were evaluated for neurologic function, specifically pin, vibration, 10-g weight sensitivity, and 2-point discrimination during the 4-month treatment period. To determine if OMT could augment recovery, the patient volunteered to use the contralateral leg as a control, with no OMT performed on the sacrum or lower back. To determine if pes planus was associated with mountaineering-induced paresthesia, a sit-to-stand navicular drop test was performed on members of the expedition party. Osteopathic manipulative treatment improved fibular head motion and muscular flexibility and released fascial restrictions of the soleus, hamstring, popliteus, and gastrocnemius. The patient's perception of stiffness, pain, and overall well-being improved with OMT. However, OMT did not shorten the duration of paresthesia. Of the 9 expedition members, 2 experienced paresthesia. Average navicular drop on standing was 5.1 mm for participants with no paresthesia vs 8.9 mm for participants with paresthesia (t test, Pparesthesia. Early diagnosis of pes planus and treatment with orthotics (which may prevent neuropathies)--or, less ideally, OMT after extreme exercise--should be sought to relieve tension and discomfort. © 2014 The American Osteopathic Association.

  4. Winter severity and snowiness and their multiannual variability in the Karkonosze Mountains and Jizera Mountains

    Science.gov (United States)

    Urban, Grzegorz; Richterová, Dáša; Kliegrová, Stanislava; Zusková, Ilona; Pawliczek, Piotr

    2017-09-01

    This paper analyses winter severity and snow conditions in the Karkonosze Mountains and Jizera Mountains and examines their long-term trends. The analysis used modified comprehensive winter snowiness (WSW) and winter severity (WOW) indices as defined by Paczos (1982). An attempt was also made to determine the relationship between the WSW and WOW indices. Measurement data were obtained from eight stations operated by the Institute of Meteorology and Water Management - National Research Institute (IMGW-PIB), from eight stations operated by the Czech Hydrological and Meteorological Institute (CHMI) and also from the Meteorological Observatory of the University of Wrocław (UWr) on Mount Szrenica. Essentially, the study covered the period from 1961 to 2015. In some cases, however, the period analysed was shorter due to the limited availability of data, which was conditioned, inter alia, by the period of operation of the station in question, and its type. Viewed on a macroscale, snow conditions in the Karkonosze Mountains and Jizera Mountains (in similar altitude zones) are clearly more favourable on southern slopes than on northern ones. In the study area, negative trends have been observed with respect to both the WSW and WOW indices—winters have become less snowy and warmer. The correlation between the WOW and WSW indices is positive. At stations with northern macroexposure, WOW and WSW show greater correlation than at ones with southern macroexposure. This relationship is the weakest for stations that are situated in the upper ranges (Mount Śnieżka and Mount Szrenica).

  5. SNL Yucca Mountain Project data report: Density and porosity data for tuffs from the unsaturated zone at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Schwartz, B.M.

    1990-02-01

    Yucca Mountain, located on and adjacent to the Nevada Test Site in southern Nevada, is being evaluated as a potential site for underground disposal of nuclear wastes. At present, the physical, thermal, and mechanical properties of tuffaceous rocks from Yucca Mountain are being determined as part of the Yucca Mountain Project. This report documents experiment data, which have been obtained by Sandia National Laboratories or its contractors, for the density and porosity of tuffaceous rocks that lie above the water table at Yucca Mountain. 7 refs., 2 figs., 3 tabs

  6. Overview of the Yucca Mountain Licensing Process

    International Nuclear Information System (INIS)

    M. Wisenburg

    2004-01-01

    This paper presents an overview of the licensing process for a Yucca Mountain repository for high-level radioactive waste and spent nuclear fuel. The paper discusses the steps in the licensing proceeding, the roles of the participants, the licensing and hearing requirements contained in the Code of Federal Regulations. A description of the Nuclear Regulatory Commission (NRC) staff acceptance and compliance reviews of the Department of Energy (DOE) application for a construction authorization and a license to receive and possess high-level radioactive waste and spent nuclear fuel is provided. The paper also includes a detailed description of the hearing process

  7. Archaeological program for the Yucca Mountain Site

    International Nuclear Information System (INIS)

    Pippin, L.C.; Rhode, D.

    1991-01-01

    Archaeological surveys, limited surface collections and selected test excavations in the Yucca Mountain Project Area have revealed four distinct aboriginal hunting and gathering adaptive strategies and a separate historic Euroamerican occupation. The four aboriginal adaptations are marked by gradual shifts in settlement locations that reflect changing resource procurement strategies. Whereas the earliest hunters and gatherers focused their activities around the exploitation of toolstone along ephemeral drainages and the hunting of game animals in the uplands, the latest aboriginal settlements reflect intensive procurement of early spring plant resources in specific upland environments. The final Euroamerican occupation in the area is marked by limited prospecting activities and travel through the area by early immigrants

  8. Plant biodiversity patterns on Helan Mountain, China

    Science.gov (United States)

    Jiang, Yuan; Kang, Muyi; Zhu, Yuan; Xu, Guangcai

    2007-09-01

    A case study was conducted to mountainous ecosystems in the east side of Helan Mountain, located in the transitional zone between steppe and desert regions of China, aiming to reveal the influences of four environmental factors on features of plant biodiversity—the spatial pattern of vegetation types, and the variation of α- and β-diversities in vegetation and flora. Field surveys on vegetation and flora and on environmental factors were conducted, and those field data were analyzed through CCA (Canonical Correspondence Analysis), and through Shannon-Weiner index for α-diversity and Sørensen index for β-diversity. The preliminary results are: (1) Ranked in terms of their impacts on spatial patterns of plant biodiversity, the four selected environmental factors would be: elevation > location > slope > exposure. (2) The variation of Shannon-Weiner index along the altitudinal gradient is similar to that of species amount within altitudinal belts spanning 200 m each, which suggests a unimodal relationship between the species richness and the environmental condition with regards to altitudinal factors. Both the Shannon-Weiner index and the species richness within each altitudinal belt reach their maximum at elevation range from about 1700 to 2000 m a.s.l. (3) The altitudinal extent with the highest Shannon-Weiner index is identical to the range, where both the deciduous broad-leaved forest, and the temperate evergreen coniferous and deciduous broad-leaved mixed forest distribute. The altitudinal range from 1700 to 2200 m a.s.l. is the sector with both high level of species richness and diversified vegetation types. (4) The variation of β-diversity along the altitude is consistent with the vegetation vertical zones. According to the Sørensen index between each pair of altitudinal belts, the transition of vegetation spectrum from one zone to another, as from the base horizontal zone, the desert steppe, to the first vertical zone, the mountain open forest and

  9. What's new in Rocky Mountain spotted fever?

    Science.gov (United States)

    Chen, Luke F; Sexton, Daniel J

    2008-09-01

    Rocky Mountain spotted fever (RMSF) remains an important illness despite an effective therapy because it is difficult to diagnose and is capable of producing a fatal outcome. The pathogenesis of RMSF remains, in large part, an enigma. However, recent research has helped shed light on this mystery. Importantly, the diagnosis of RMSF must be considered in all febrile patients who have known or possible exposure to ticks, especially if they live in or have traveled to endemic regions during warmer months. Decisions about giving empiric therapy to such patients are difficult and require skill and careful judgement.

  10. Runoff formation in a small mountainous catchment

    Czech Academy of Sciences Publication Activity Database

    Tesař, Miroslav; Šír, Miloslav; Lichner, Ľ.

    2003-01-01

    Roč. 4, č. 2 (2003), s. 265-270 ISSN 1335-6291 R&D Projects: GA AV ČR IAA3060001; GA AV ČR IBS2060104; GA MŽP SE/610/3/00 Grant - others:Slovak Scientific Grant Agency(SK) 2/7065/20; 5th EC Framework Programme(XE) IST-2000-28084 Institutional research plan: CEZ:AV0Z2060917 Keywords : hydrology * rainfall-runoff relationship * small mountainous catchment Subject RIV: DA - Hydrology ; Limnology

  11. Human Infection in Wild Mountain Gorillas

    Centers for Disease Control (CDC) Podcasts

    2011-04-25

    This podcast discusses a study about the transmission of Human Metapneumovirus Infection to wild mountain gorillas in Rwanda in 2009, published in the April 2011 issue of Emerging Infectious Diseases. Dr. Ian Lipkin, Director of the Center for Infection and Immunity and Dr. Gustavo Palacios, investigator in the Center of Infection & Immunity share details of this study.  Created: 4/25/2011 by National Center for Emerging Zoonotic and Infectious Diseases (NCEZID).   Date Released: 5/2/2011.

  12. Tunneling progress on the Yucca Mountain Project

    International Nuclear Information System (INIS)

    Hansmire, W.H.; Munzer, R.J.

    1996-01-01

    The current status of tunneling progress on the Yucca Mountain Project (YMP) is presented in this paper. The Exploratory Studies Facility (ESF), a key part of the YMP, has been long in development and construction is ongoing. This is a progress report on the tunneling aspects of the ESF as of January 1, 1996. For purposes of discussion in this summary, the tunneling has progressed in four general phases. The paper describes: tunneling in jointed rock under low stress; tunneling through the Bow Ridge Fault and soft rock; tunneling through the Imbricate Fault Zone; and Tunneling into the candidate repository formation

  13. The Army Ground Forces Training for Mountain and Winter Warfare - Study No. 23

    National Research Council Canada - National Science Library

    Govan, Thomas

    1946-01-01

    This general study of the experiments in mountain and winter warfare training from 1940 to 1944 is designed as an introduction to the histories of the Mountain Training Center and The 10th Mountain...

  14. 76 FR 41753 - Sierra National Forest, Bass Lake Ranger District, California, Grey's Mountain Ecosystem...

    Science.gov (United States)

    2011-07-15

    ..., California, Grey's Mountain Ecosystem Restoration Project AGENCY: Forest Service, USDA. ACTION: Notice of...: Background Information: The Grey's Mountain Ecosystem Restoration Project (Madera County, California) lies... vegetation. Currently, vegetation within the Grey's Mountain Ecosystem Restoration Project has changed from...

  15. Specialized microbial databases for inductive exploration of microbial genome sequences

    Directory of Open Access Journals (Sweden)

    Cabau Cédric

    2005-02-01

    Full Text Available Abstract Background The enormous amount of genome sequence data asks for user-oriented databases to manage sequences and annotations. Queries must include search tools permitting function identification through exploration of related objects. Methods The GenoList package for collecting and mining microbial genome databases has been rewritten using MySQL as the database management system. Functions that were not available in MySQL, such as nested subquery, have been implemented. Results Inductive reasoning in the study of genomes starts from "islands of knowledge", centered around genes with some known background. With this concept of "neighborhood" in mind, a modified version of the GenoList structure has been used for organizing sequence data from prokaryotic genomes of particular interest in China. GenoChore http://bioinfo.hku.hk/genochore.html, a set of 17 specialized end-user-oriented microbial databases (including one instance of Microsporidia, Encephalitozoon cuniculi, a member of Eukarya has been made publicly available. These databases allow the user to browse genome sequence and annotation data using standard queries. In addition they provide a weekly update of searches against the world-wide protein sequences data libraries, allowing one to monitor annotation updates on genes of interest. Finally, they allow users to search for patterns in DNA or protein sequences, taking into account a clustering of genes into formal operons, as well as providing extra facilities to query sequences using predefined sequence patterns. Conclusion This growing set of specialized microbial databases organize data created by the first Chinese bacterial genome programs (ThermaList, Thermoanaerobacter tencongensis, LeptoList, with two different genomes of Leptospira interrogans and SepiList, Staphylococcus epidermidis associated to related organisms for comparison.

  16. Microbial Endocrinology: An Ongoing Personal Journey.

    Science.gov (United States)

    Lyte, Mark

    2016-01-01

    The development of microbial endocrinology is covered from a decidedly personal perspective. Specific focus is given to the role of microbial endocrinology in the evolutionary symbiosis between man and microbe as it relates to both health and disease. Since the first edition of this book series 5 years ago, the role of microbial endocrinology in the microbiota-gut-brain axis is additionally discussed. Future avenues of research are suggested.

  17. Recreating Galileo's 1609 Discovery of Lunar Mountains

    Science.gov (United States)

    Pasachoff, Jay M.; Needham, Paul S.; Wright, Ernest T.; Gingerich, Owen

    2014-11-01

    The question of exactly which lunar features persuaded Galileo that there were mountains on the moon has not yet been definitively answered; Galileo was famously more interested in the concepts rather than the topographic mapping in his drawings and the eventual engravings. Since the pioneering work of Ewen Whitaker on trying to identify which specific lunar-terminator features were those that Galileo identified as mountains on the moon in his 1609 observations reported in his Sidereus Nuncius (Venice, 1610), and since the important work on the sequence of Galileo's observations by Owen Gingerich (see "The Mystery of the Missing 2" in Galilaeana IX, 2010, in which he concludes that "the Florentine bifolium sheet [with Galileo's watercolor images] is Galileo's source for the reworked lunar diagrams in Sidereus Nuncius"), there have been advances in lunar topographical measurements that should advance the discussion. In particular, one of us (E.T.W.) at the Scientific Visualization Studio of NASA's Goddard Space Flight Center has used laser-topography from NASA's Lunar Reconnaissance Orbiter to recreate what Galileo would have seen over a sequence of dates in late November and early December 1609, and provided animations both at native resolution and at the degraded resolution that Galileo would have observed with his telescope. The Japanese Kaguya spacecraft also provides modern laser-mapped topographical maps.

  18. Restructured site characterization program at Yucca Mountain

    International Nuclear Information System (INIS)

    Dyer, J.R.; Vawter, R.G.

    1995-01-01

    During 1994 and the early part of 1995, the US Department of Energy's Yucca Mountain Site Characterization Office (YMSCO) and its parent organization, the Office of Civilian Radioactive Waste Management (OCRWM) underwent a significant restructuring. Senior Department officials provided the leadership to reorient the management, technical, programmatic, and public interaction approach to the US High Level Radioactive Waste Disposal Program. The restructuring involved reorganizing the federal staff, conducting meaningful strategic planning, improving the management system, rationalizing contractor responsibilities, focusing upon major products, and increasing stakeholder involvement. The restructured program has prioritized technical and scientific activities toward meeting major regulatory milestones in a timely and cost-effective manner. This approach has raised concern among elements of technical, scientific, and oversight bodies that suitability and licensing decisions could be made without obtaining sufficient technical information for this first-of-its-kind endeavor. Other organizations, such as congressional committees, industrial groups, and rate payers believe characterization goals can be met in a timely manner and within the limitation of available funds. To balance these contrasting views in its decision making process, OCRWM management has made a special effort to communicate its strategy to oversight bodies, the scientific community and other stakeholders and to use external independent peer review as a key means of demonstrating scientific credibility. Site characterization of Yucca Mountain in Nevada is one of the key elements of the restructured program

  19. Aquatic studies of Gable Mountain Pond

    International Nuclear Information System (INIS)

    Cushing, C.E.; Watson, D.G.

    1974-12-01

    Studies of the biotic and abiotic components of the Gable Mountain Pond (HAPO cooling water disposal pond) ecosystem were undertaken to determine if there was a potential problem for off-site transfer of radioactivity to man originating with the aquatic food web. Most of the 137 Cs in the pond is associated with the sediments which are probably the main source of 137 Cs for uptake by the biota. Generally, highest concentrations of 137 Cs and other radioisotopes were found in the upper two inches of sediments in the northwest end of the pond and in the deeper areas along the long-axis of the pond. Native goldfish had maximum and average 137 Cs concentrations of about 340 and 170 pCi/g dry wt, respectively. Algae, macrophytes, and detritus comprised the main food items of the goldfish, and the 137 Cs levels in the plants were usually higher than the 137 Cs concentration in the fish. The 137 Cs concentrations of wild experimental ducks restricted to Gable Mountain Pond were approximately the same as resident coots, but significantly higher than transient wild ducks. Neither the goldfish nor the waterfowl inhabiting the pond attained concentrations of 137 Cs exceeding acceptable limits. Sediment, however, could be a source of high concentrations of radioactivity or radioactive contamination concern if the concentration of radiocontaminants increased and/or the pond dries up, and the contaminated sediments become windborne. (U.S.)

  20. Magma Dynamics at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    D. Krier

    2005-01-01

    Small-volume basaltic volcanic activity at Yucca Mountain has been identified as one of the potential events that could lead to release of radioactive material from the U.S. Department of Energy (DOE) designated nuclear waste repository at Yucca Mountain. Release of material could occur indirectly as a result of magmatic dike intrusion into the repository (with no associated surface eruption) by changing groundwater flow paths, or as a result of an eruption (dike intrusion of the repository drifts, followed by surface eruption of contaminated ash) or volcanic ejection of material onto the Earth's surface and the redistribution of contaminated volcanic tephra. Either release method includes interaction between emplacement drifts and a magmatic dike or conduit, and natural (geologic) processes that might interrupt or halt igneous activity. This analysis provides summary information on two approaches to evaluate effects of disruption at the repository by basaltic igneous activity: (1) descriptions of the physical geometry of ascending basaltic dikes and their interaction with silicic host rocks similar in composition to the repository host rocks; and (2) a summary of calculations developed to quantify the response of emplacement drifts that have been flooded with magma and repressurized following blockage of an eruptive conduit. The purpose of these analyses is to explore the potential consequences that could occur during the full duration of an igneous event

  1. Magma Dynamics at Yucca Mountain, Nevada

    Energy Technology Data Exchange (ETDEWEB)

    D. Krier

    2005-08-29

    Small-volume basaltic volcanic activity at Yucca Mountain has been identified as one of the potential events that could lead to release of radioactive material from the U.S. Department of Energy (DOE) designated nuclear waste repository at Yucca Mountain. Release of material could occur indirectly as a result of magmatic dike intrusion into the repository (with no associated surface eruption) by changing groundwater flow paths, or as a result of an eruption (dike intrusion of the repository drifts, followed by surface eruption of contaminated ash) or volcanic ejection of material onto the Earth's surface and the redistribution of contaminated volcanic tephra. Either release method includes interaction between emplacement drifts and a magmatic dike or conduit, and natural (geologic) processes that might interrupt or halt igneous activity. This analysis provides summary information on two approaches to evaluate effects of disruption at the repository by basaltic igneous activity: (1) descriptions of the physical geometry of ascending basaltic dikes and their interaction with silicic host rocks similar in composition to the repository host rocks; and (2) a summary of calculations developed to quantify the response of emplacement drifts that have been flooded with magma and repressurized following blockage of an eruptive conduit. The purpose of these analyses is to explore the potential consequences that could occur during the full duration of an igneous event.

  2. AHP 40: Review: Mountains, Monasteries, and Mosques

    Directory of Open Access Journals (Sweden)

    Bettina Zeisler

    2016-02-01

    Full Text Available Ladakh is famous among trekkers for her mountains and among other tourists also for her association with Tibetan Buddhism. Most visitors, however, neglect that half or more of the population follow a different religion, and hardly anybody comes to Ladakh specifically for her mosques. While the title of the volume under review is somewhat misleading – none of the articles deals specifically with monasteries or mosques, and only one, the last, with (sacred mountains – it aptly highlights that Islam has become an essential part of Ladakhi culture, and cannot be ignored. Nevertheless, the volume is again heavily biased towards Buddhism and the middle class Ladakhi. Only two of the fifteen articles deal with Islam, and a further one with a Muslim trader. In contrast, five articles engage with ritualistic aspects within the Buddhist fold, and a sixth with a Buddhist community. The remaining six articles, actually constituting the first part of the volume, deal with trade and other aspects of Buddhist or general history, of which four also involve neighbouring regions: Spiti, Bashar, Kinnaur, and Kangra. ...

  3. Yucca Mountain Climate Technical Support Representative

    International Nuclear Information System (INIS)

    Sharpe, Saxon E

    2007-01-01

    The primary objective of Project Activity ORD-FY04-012, 'Yucca Mountain Climate Technical Support Representative', was to provide the Office of Civilian Radioactive Waste Management (OCRWM) with expertise on past, present, and future climate scenarios and to support the technical elements of the Yucca Mountain Project (YMP) climate program. The Climate Technical Support Representative was to explain, defend, and interpret the YMP climate program to the various audiences during Site Recommendation and License Application. This technical support representative was to support DOE management in the preparation and review of documents, and to participate in comment response for the Final Environmental Impact Statement, the Site Recommendation Hearings, the NRC Sufficiency Comments, and other forums as designated by DOE management. Because the activity was terminated 12 months early and experience a 27% reduction in budget, it was not possible to complete all components of the tasks as originally envisioned. Activities not completed include the qualification of climate datasets and the production of a qualified technical report. The following final report is an unqualified summary of the activities that were completed given the reduced time and funding

  4. Mountain biking injuries in rural England.

    Science.gov (United States)

    Jeys, L M; Cribb, G; Toms, A D; Hay, S M

    2001-06-01

    Off road mountain biking is now an extremely popular recreation and a potent cause of serious injury. To establish the morbidity associated with this sport. Data were collected prospectively over one year on all patients presenting with an injury caused by either recreational or competitive off road mountain biking. Eighty four patients were identified, 70 males and 14 females, with a mean age of 22.5 years (range 8-71). Most accidents occurred during the summer months, most commonly in August. Each patient had an average of 1.6 injuries (n = 133) and these were divided into 15 categories, ranging from minor soft tissue to potentially life threatening. Operative intervention was indicated for 19 patients (23%) and several required multiple procedures. The commonest injuries were clavicle fractures (13%), shoulder injuries (12%), and distal radial fractures (11%). However, of a more sinister nature, one patient had a C2/3 dislocation requiring urgent stabilisation, one required a chest drain for a haemopneumothorax, and another required an emergency and life saving nephrectomy. This sport has recently experienced an explosion in popularity, and, as it carries a significant risk of potentially life threatening injury across all levels of participation, the use of protective equipment to reduce this significant morbidity may be advisable.

  5. Seismic monitoring of the Yucca Mountain facility

    International Nuclear Information System (INIS)

    Garbin, H.D.; Herrington, P.B.; Kromer, R.P.

    1997-01-01

    Questions have arisen regarding the applicability of seismic sensors to detect mining (re-entry) with a tunnel boring machine (TBM). Unlike cut and blast techniques of mining which produce impulsive seismic signals, the TBM produces seismic signals which are of long duration. (There are well established techniques available for detecting and locating the sources of the impulsive signals.) The Yucca Mountain repository offered an opportunity to perform field evaluations of the capabilities of seismic sensors because during much of 1996, mining there was progressing with the use of a TBM. During the mining of the repository's southern branch, an effort was designed to evaluate whether the TBM could be detected, identified and located using seismic sensors. Three data acquisition stations were established in the Yucca Mountain area to monitor the TBM activity. A ratio of short term average to long term average algorithm was developed for use in signal detection based on the characteristics shown in the time series. For location of the source of detected signals, FK analysis was used on the array data to estimate back azimuths. The back azimuth from the 3 component system was estimated from the horizontal components. Unique features in the timing of the seismic signal were used to identify the source as the TBM

  6. FLORA LICHEN WESTERN MOUNTAINS VRANJE PLACE

    Directory of Open Access Journals (Sweden)

    Gordana Bogdanović

    2016-07-01

    Full Text Available Lichen is a symbiotic plant built by the cells of algae and fungi hyphae. Algae are usually presented - green (Chlorophyta or blue green (Cyanophyta, a mushroom commonly found is ascomycetae and sometimes basidiomycetae. Mushrooms receive oxygen and carbohydrates from algae, and they in turn provide water, CO2 and mineral salts. Lichens are often found on trees and rocks in unpolluted environments and can be used as a bioindicator species. In during 2015-2016. was realized a survey of epiphytic lichen flora of the western mountains in environment of Vranje. Sampling was carried out at 4 locations: Borino brdo, Krstilovica, Markovo Kale and Pljačkovica. Based on the collected and determined samples can be concluded that the study implemented of the area of 25 species of lichens of which: 8 as crust, leafy 12 and 5 shrub. The research results indicate that the lichen flora of the western mountains environments Vranje of a rich and diverse as a result of favorable geographic position, geological and soil composition, climate and plant cover that provide opportunities for the development and survival of lichens.

  7. Using science soundly: The Yucca Mountain standard

    International Nuclear Information System (INIS)

    Fri, R.W.

    1995-01-01

    Using sound science to shape government regulation is one of the most hotly argued topics in the ongoing debate about regulatory reform. Even though no one advaocates using unsound science, the belief that even the best science will sweep away regulatory controversy is equally foolish. As chair of a National Research Council (NRC) committee that studied the scientific basis for regulating high-level nuclear waste disposal, the author learned that science alone could resolve few of the key regulatory questions. Developing a standard that specifies a socially acceptable limit on the human health effects of nuclear waste releases involves many decisions. As the NRC committee learned in evaluating the scientific basis for the Yucca Mountain standard, a scientifically best decision rarely exists. More often, science can only offer a useful framework and starting point for policy debates. And sometimes, science's most helpful contribution is to admit that it has nothing to say. The Yucca mountain study clearly illustrates that excessive faith in the power of science is more likely to produce messy frustration than crisp decisions. A better goal for regulatory reform is the sound use of science to clarify and contain the inevitable policy controversy

  8. Mineral waters from the Tanzawa Mountains

    Energy Technology Data Exchange (ETDEWEB)

    Oki, Y; Tajima, Y; Hirano, T; Ogino, K; Hirota, S; Takahashi, S; Kokaji, F; Moriya, M; Sugimoto, M

    1964-11-01

    Mineral waters from the depths of the Tanzawa mountains are briefly characterized as having high pH values ranging from 9.5 to 10.0. The origin of the mineral waters is discussed in relation to zeolites extensively developed along fractures and joints throughout the Tanzawa mountains. Thermal water (33/sup 0/C) of the Nakagawa spa may be regarded as evidence of past strong geothermal activity. Measurement of geothermal gradient at two locations, Nakagawa (12.6/sup 0/C/100m) and Higashi-sawa (5.55/sup 0/C/100m) also supports the presence of weak thermal activity in the depths. Chemical analysis of the mineral waters indicates that the pH of the system is chiefly controlled by the ratio of CO/sub 3//sup - -//HCO/sub 3//sup -/. The following reaction with zeolites promotes an increase of the pH: HCO/sub 3//sup -/ + (Ca/Na) zeolites reversible CO/sub 3//sup - -/ + H-type (Ca/Na) zeolites + (Ca/sup + +//Na/sup +/).

  9. Rethinking risk and disasters in mountain areas

    Directory of Open Access Journals (Sweden)

    Kenneth Hewitt

    2012-05-01

    Full Text Available This chapter presents a view of risk and disaster in the mountains that finds them fully a part of public safety issues in modern states and developments, rather than separated from them. This contrasts with prevailing approaches to disaster focused on natural hazards, “unscheduled” or extreme events, and emergency preparedness; approaches strongly reinforced by mountain stereotypes. Rather, we find the legacies of social and economic histories, especially relations to down-country or metropolitan actors, are decisive in shaping contemporary “mountain realities”. Developments in transportation, resource extraction and tourism that serve state and international agendas can increase rather than reduce risks for mountain populations, and undermine pre-existing strategies to minimise environmental dangers. Above all, we see rapid urbanisation in mountains generally and the Himalaya in particular as highly implicated in exacerbating risks and creating new types of vulnerabilities. Enforced displacement, and concentration of people in urban agglomerations, is a major part of the modern history of mountain lands that invites more careful exploration. Rapid expansion of built environments and infrastructure, without due regard to hazards and structural safety, introduce new and complex risks, while altering older equations with and to the land and sapping people’s resilience. In the lives of mountain people, environmental hazards are mostly subordinate to other, societal sources of risk and vulnerability, and to the insecurities these involve. Basically we conclude that “marginalisation” of mountain lands is primarily an outcome of socio-economic developments in which their condition is subordinated to strategic planning by state, metropolitan and global actors.Cet article aborde la question des risques et des catastrophes en montagne. Il vise non pas à dissocier mais plutôt à replacer ces concepts au cœur des questions de s

  10. Yucca Mountain drift scale test progress report

    Energy Technology Data Exchange (ETDEWEB)

    Apps, J.; Birkholzer, J.T.; Peterson,J.E.; Sonnenthal, E.; Spycher, N.; Tsang, Y.W.; Williams, K.H.

    1999-01-01

    The Drift Scale Test (DST) is part of the Exploratory Studies Facility (ESF) Thermal Test being conducted underground at the potential high-level nuclear waste repository at Yucca Mountain, Nevada. The purpose of the ESF Thermal Test is to acquire a more in-depth understanding of the coupled thermal, mechanical, hydrological, and chemical processes likely to be encountered in the rock mass surrounding the potential geological repository at Yucca Mountain. These processes are monitored by a multitude of sensors to measure the temperature, humidity, gas pressure, and mechanical displacement, of the rock formation in response to the heat generated by the heaters. In addition to collecting passive monitoring data, active hydrological and geophysical testing is also being carried out periodically in the DST. These active tests are intended to monitor changes in the moisture redistribution in the rock mass, to collect water and gas samples for chemical and isotopic analysis, and to detect microfiacturing due to heating. On December 3, 1998, the heaters in the DST were activated. The planned heating phase of the DST is 4 years, and the cooling phase following the power shutoff will be of similar duration. The present report summarizes interpretation and analysis of thermal, hydrological, chemical, and geophysical data for the first 6 months; it is the first of many progress reports to be prepared during the DST.

  11. Fuels management in the southern Appalachian Mountains, hot continental division

    Science.gov (United States)

    Matthew J. Reilly; Thomas A. Waldrop; Joseph J. O’Brien

    2012-01-01

    The Southern Appalachian Mountains, Hot Continental Mountains Division, M220 (McNab and others 2007) are a topographically and biologically complex area with over 10 million ha of forested land, where complex environmental gradients have resulted in a great diversity of forest types. Abundant moisture and a long, warm growing season support high levels of productivity...

  12. GEOLOGICAL ANDGEOMORPHOLOGICAL MAPPING ARCHAEOLOGICAL MONUMENTS OF MOUNTAIN ALTAI

    Directory of Open Access Journals (Sweden)

    G. Y. Baryshnikov

    2015-01-01

    Full Text Available The article discusses the results of geological and geomorphological mapping of archaeological monument, mainly Paleolithic age, the location of which is confined to low-mountain spaces of the Mountain Altai. Using this mapping would greatly clarify the sequence of relief habitat of ancient people and more objectively determine the age characteristics of archaeological monument. 

  13. Climate Change Adaptation in the Carpathian Mountain Region

    NARCIS (Netherlands)

    Werners, Saskia Elisabeth; Szalai, Sándor; Zingstra, Henk; Kőpataki, Éva; Beckmann, Andreas; Bos, Ernst; Civic, Kristijan; Hlásny, Tomas; Hulea, Orieta; Jurek, Matthias; Koch, Hagen; Kondor, Attila Csaba; Kovbasko, Aleksandra; Lakatos, M.; Lambert, Stijn; Peters, Richard; Trombik, Jiří; De Velde, Van Ilse; Zsuffa, István

    2016-01-01

    The Carpathian mountain region is one of the most significant natural refuges on the European continent. It is home to Europe’s most extensive tracts of montane forest, the largest remaining virgin forest and natural mountain beech-fir forest ecosystems. Adding to the biodiversity are semi-natural

  14. Sustainability and Mountain Tourism: The Millennial’s Perspective

    Directory of Open Access Journals (Sweden)

    Alessandro Bonadonna

    2017-07-01

    Full Text Available Evidence from several studies illustrates the different points of view through which sustainability and mountains have been studied over the years. Nowadays, interest in Millennials is increasing but no research has compared Millennials and sustainability in the mountain context. This study aims at defining sustainability with reference to Millennial perception of both winter and summer mountain sports. By analysing data gathered from a sample of 2292 Millennials (Piedmont area, the authors confirm their high degree of sensitivity towards sustainable issues and, above all, discover that there are differences in the sustainable perception Millennials have of both mountain winter and summer sports. More specifically, Millennial perception is deeply influenced by the place where they are used to living―mountains or cities―and by their gender. From a managerial point of view, results have direct implications on the administrators of mountain institutions who can implement appropriate initiatives in order to correctly sensitise Millennials towards mountain sports. Moreover, from a theoretical perspective, the study opens a new scenario on two important topics linked to sustainability, namely Millennials and mountain sports.

  15. Personal and professional profile of mountain medicine physicians.

    Science.gov (United States)

    Peters, Patrick

    2003-01-01

    The purpose of this study was to define and describe the personal and professional profile of mountain medicine physicians including general physical training information and to include a detailed overview of the practice of mountain sports. A group of physicians participating in a specialized mountain medicine education program filled out a standardized questionnaire. The data obtained from this questionnaire were first analyzed in a descriptive way and then by statistical methods (chi2 test, t test, and analysis of variance). Detailed results have been provided for gender, age, marital status, general training frequency and methods, professional status, additional medical qualifications, memberships in professional societies and alpine clubs, mountain sports practice, and injuries sustained during the practice of mountain sports. This study has provided a detailed overview concerning the personal and professional profile of mountain medicine physicians. Course organizers as well as official commissions regulating the education in mountain medicine will be able to use this information to adapt and optimize the courses and the recommendations/requirements as detailed by the UIAA-ICAR-ISMM (Union Internationale des Associations Alpinistes, International Commission for Alpine Rescue, International Society for Mountain Medicine).

  16. Rocky Mountain Research Station: 2012-2013 Annual Report

    Science.gov (United States)

    Cass Cairns

    2013-01-01

    The Rocky Mountain Research Station is one of seven regional units that make up the USDA Forest Service Research and Development organization - the most extensive natural resources research organization in the world. We maintain 12 field laboratories throughout a 12-state territory encompassing the Great Basin, Southwest, Rocky Mountains, and parts of the...

  17. 75 FR 12163 - Class E Airspace; Mountain View, AR

    Science.gov (United States)

    2010-03-15

    ...-1181; Airspace Docket No. 09-ASW-36] Class E Airspace; Mountain View, AR AGENCY: Federal Aviation... Class E airspace at Mountain View, AR. Decommissioning of the Wilcox non-directional beacon (NDB) at... View, AR. Airspace reconfiguration is necessary due to the decommissioning of the Wilcox NDB and the...

  18. Historic forests and endemic mountain pine beetle and dwarf mistletoe

    Science.gov (United States)

    Jose Negron

    2012-01-01

    Mountain pine beetle has always been a significant disturbance agent in ponderosa and lodgepole pine forests in Colorado. Most studies have examined the impacts to forest structure associated with epidemic populations of a single disturbance agent. In this paper we address the role of endemic populations of mountain pine and their interactions with dwarf mistletoe...

  19. Refresher Course on Mountain Hydrology and Climate Change

    Indian Academy of Sciences (India)

    IAS Admin

    2016-01-29

    Jan 29, 2016 ... The programme focuses on hydrology of mountains, which provide water around 40 % of the world population. Changes in temperature and precipitation have in recent years led to the retreat of glaciers in mountains. Climatic changes do not only affect glaciers or the nival zone; a change in climatic ...

  20. Overview of the status of the Cheat Mountain salamander

    Science.gov (United States)

    Thomas K. Pauley

    2010-01-01

    Plethodon nettingi, the Cheat Mountain salamander, is endemic to the high elevations of the Allegheny Mountains in eastern West Virginia. In 1938, N.B. Green named the species from specimens collected at Barton Knob, Randolph County, in honor of his friend and colleague Graham Netting.

  1. Copper Mountain, Wyoming, a uranium district--rediscovered

    International Nuclear Information System (INIS)

    Cramer, R.T.; Yellich, J.A.; Kendall, R.G.

    1979-01-01

    The Copper Mountain area is physiographically located along the Owl Creek Mountains. Economic uranium mineralization was delineated in the late 1950's with production of approximately 500,000 pounds from 1961-1970. Continued exploration and research has discovered additional resources. 20 refs

  2. Mechanisms of carbon storage in mountainous headwater rivers

    Science.gov (United States)

    Ellen Wohl; Kathleen Dwire; Nicholas Sutfin; Lina Polvi; Roberto Bazan

    2012-01-01

    Published research emphasizes rapid downstream export of terrestrial carbon from mountainous headwater rivers, but little work focuses on mechanisms that create carbon storage along these rivers, or on the volume of carbon storage. Here we estimate organic carbon stored in diverse valley types of headwater rivers in Rocky Mountain National Park, CO, USA. We show that...

  3. Baboquivari Mountain plants: Identification, ecology, and ethnobotany [Book Review

    Science.gov (United States)

    Rosemary L. Pendleton

    2011-01-01

    The Sky Islands of southern Arizona and northwestern Mexico make up a region that is rich, both biologically and culturally. These isolated mountain ranges, separated by desert "seas," contain a unique and diverse flora and have long been home to indigenous peoples of the southwestern US. This book, Baboquivari Mountain Plants: Identification, Ecology, and...

  4. Periodic Burning In Table Mountain-Pitch Pine Stands

    Science.gov (United States)

    Russell B. Randles; David H. van Lear; Thomas A. Waldrop; Dean M. Simon

    2002-01-01

    Abstract - The effects of multiple, low intensity burns on vegetation and wildlife habitat in Table Mountain (Pinus pungens Lamb.)-pitch (Pinus rigida Mill.) pine communities were studied in the Blue Ridge Mountains of North Carolina. Treatments consisted of areas burned from one to four times at 3-4 year...

  5. HYDROLOGIC CHARACTERISTICS OF FAULTS AT YUCCA MOUNTAIN, NEVADA

    International Nuclear Information System (INIS)

    R.P. Dickerson

    2000-01-01

    Yucca Mountain comprises a series of north-trending ridges composed of tuffs within the southwest Nevada volcanic field, 120 km northwest of Las Vegas, Nevada. These ridges are formed of east-dipping blocks of interbedded welded and nonwelded tuff that are offset along steep, mostly west-dipping faults that have tens to hundreds of meters of vertical separation. Yucca Mountain is currently under study as a potential site for underground storage of high-level radioactive waste, with the principle goal being the safe isolation of the waste from the accessible environment. To this end, an understanding of the behavior of ground-water flow through the mountain in the unsaturated zone and beneath the mountain in the saturated zone is critical. The percolation of water through the mountain and into the ground-water flow system beneath the potential repository site is predicated on: (1) the amount of water available at the surface as a result of the climatic conditions, (2) the hydrogeologic characteristics of the volcanic strata that compose the mountain. and (3) the hydrogeologic characteristics of the structures, particularly fault zones and fracture networks, that disrupt these strata. This paper addresses the hydrogeologic characteristics of the fault zones at Yucca Mountain, focusing primarily on the central part of the mountain where the potential repository block is located

  6. Wild mountains, wild rivers: Keeping the sacred origins

    Science.gov (United States)

    Linda Moon Stumpff

    2007-01-01

    For many indigenous peoples in North America, wild mountains and rivers and other natural formations exist as physical beings formed as part of a whole by forces that interconnect people with them. This perspective frames a discussion around an idea that expresses time and space as wrapped up in the mountain. If time is within the being of place and space within the...

  7. Upland forest vegetation of the Ozark Mountains in Northwestern Arkansas

    Science.gov (United States)

    Steven L. Stephenson; Harold S. Adams; Cynthia D. Huebner

    2007-01-01

    Quantitative data on structure and composition of all strata of vegetation were collected from 20 study sites in the Boston Mountains Subsection of the Ozark Mountains of northwestern Arkansas in June 2004. All study sites were located at upper slope or ridgetop positions and occurred at elevations > 457 m. Oaks (Quercus spp.) were dominants in...

  8. Use of thermal data to estimate infiltration, Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    LeCain, Gary D.; Kurzmack, Mark

    2001-01-01

    Temperature and pressure monitoring in a vertical borehole in Pagany Wash, Yucca Mountain, Nevada, measured disruptions of the natural gradients associated with the February, 1998, El Nino precipitation events. The temperature and pressure disruptions indicated infiltration and percolation through the 12.1 m of Pagany Wash alluvium and deep percolation to greater than 35.2 m into the Yucca Mountain Tuff

  9. Microbial community structure elucidates performance of Glyceria maxima plant microbial fuel cell

    OpenAIRE

    Timmers, R.A.; Rothballer, M.; Strik, D.P.B.T.B.; Engel, M.; Schulz, M.; Hartmann, A.; Hamelers, H.V.M.; Buisman, C.J.N.

    2012-01-01

    The plant microbial fuel cell (PMFC) is a technology in which living plant roots provide electron donor, via rhizodeposition, to a mixed microbial community to generate electricity in a microbial fuel cell. Analysis and localisation of the microbial community is necessary for gaining insight into the competition for electron donor in a PMFC. This paper characterises the anode-rhizosphere bacterial community of a Glyceria maxima (reed mannagrass) PMFC. Electrochemically active bacteria (EAB) w...

  10. Microbial community structure elucidates performance of Glyceria maxima plant microbial fuel cell

    OpenAIRE

    Timmers, Ruud A.; Rothballer, Michael; Strik, David P. B. T. B.; Engel, Marion; Schulz, Stephan; Schloter, Michael; Hartmann, Anton; Hamelers, Bert; Buisman, Cees

    2012-01-01

    The plant microbial fuel cell (PMFC) is a technology in which living plant roots provide electron donor, via rhizodeposition, to a mixed microbial community to generate electricity in a microbial fuel cell. Analysis and localisation of the microbial community is necessary for gaining insight into the competition for electron donor in a PMFC. This paper characterises the anode–rhizosphere bacterial community of a Glyceria maxima (reed mannagrass) PMFC. Electrochemically active bacteria (EAB) w...

  11. Mountain geomorphosites in Odle Group (Dolomites, Italy)

    Science.gov (United States)

    Coratza, Paola; Ghinoi, Alessandro; Marchetti, Mauro; Soldati, Mauro

    2016-04-01

    The area, considered in the present study, is located in the north-eastern sector of the Gardena valley, in the Odle Group, a popular destination of summer and winter tourism (more than 3000 m a.s.l.). The area has a strong hiking-tourism vocation thanks to its spectacular high-mountain landscape and a dense network of hiking tracks. The well-developed network of hiking paths and slopes for many different climbing skills offers a lot of possibilities for high-mountain excursions. Permanent dwelling-places are absent with the exceptions of a few tourist structures nearby opened during certain periods of the year. This area, as all Dolomites, which became UNESCO Word Heritage Site in 2009, represent landscape mosaics, which express the summation of landscape histories and processes offering an almost complete educational open-air laboratory due to the variety and complexity of phenomena and processes taking place during present climate conditions and during recent geological periods. These mountains, due to the aggregation of relict, recent and active landforms constitute an outstanding geoheritage, suitable for educational and tourist purposes. Landforms typical of past morphoclimatic conditions (inherited geomorphosites) share the stage with forms and processes active in the current morphoclimatic conditions (active geomorphosites); their spatial and geometrical relationships may be sufficient to trace a relative time-line of the geomorphological history of the area. Several glacial landforms testify for the presence and the activity of a glacial tongue hosted in the valley during the Lateglacial, mainly located in the northern sector of the area, where altitudes range from about 2000 m to about 2300 m a.s.l. Among these, worth of note are the well-preserved glacial cirques of Val dla Roa and those located at the southern margin of the Odle Group. Quite well preserved moraine ridges are present at a mean altitude of some 2000 m at the Alpe di Cisles as well as

  12. Can nuclear waste be stored safely at Yucca mountain?

    International Nuclear Information System (INIS)

    Whipple, C.G.

    1996-01-01

    In 1987 the federal government narrowed to one its long-term options for disposing of nuclear waste: storing it permanently in a series of caverns excavated out of the rock deep below Yucca mountain in southern Nevada. Whether it makes sense at this time to dispose permanently of spent fuel and radioactive waste in a deep geologic repository is hotly disputed. But the Nuclear Waste Policy Act amendements of 1987 decree that waste be consolidated in Yucca Mountain if the mountain is found suitable. Meanwhile the spent fuel continues to pile up across the country, and 1998 looms, adding urgency to the question: What can science tell us about the ability of the mountain to store nuclear waste safely? This paper discusses this issue and describes how studies of the mountain's history and geology can contribute useful insights but not unequivocal conclusions

  13. Electricity production and microbial characterization of thermophilic microbial fuel cells.

    Science.gov (United States)

    Dai, Kun; Wen, Jun-Li; Zhang, Fang; Ma, Xi-Wen; Cui, Xiang-Yu; Zhang, Qi; Zhao, Ting-Jia; Zeng, Raymond J

    2017-11-01

    Thermophilic microbial fuel cell (TMFC) offers many benefits, but the investigations on the diversity of exoelectrogenic bacteria are scarce. In this study, a two-chamber TMFC was constructed using ethanol as an electron donor, and the microbial dynamics were analyzed by high-throughput sequencing and 16S rRNA clone-library sequencing. The open-circuit potential of TMFC was approximately 650mV, while the maximum voltage was around 550mV. The maximum power density was 437mW/m 2 , and the columbic efficiency in this work was 20.5±6.0%. The Firmicutes bacteria, related to the uncultured bacterium clone A55_D21_H_B_C01 with a similarity of 99%, accounted for 90.9% of all bacteria in the TMFC biofilm. This unknown bacterium has the potential to become a new thermophilic exoelectrogenic bacterium that is yet to be cultured. The development of TMFC-involved biotechnologies will be beneficial for the production of valuable chemicals and generation of energy in the future. Copyright © 2017 Elsevier Ltd. All rights reserved.

  14. Microbial Regulation in Gorgonian Corals

    Directory of Open Access Journals (Sweden)

    Laura D. Mydlarz

    2012-06-01

    Full Text Available Gorgonian corals possess many novel natural products that could potentially mediate coral-bacterial interactions. Since many bacteria use quorum sensing (QS signals to facilitate colonization of host organisms, regulation of prokaryotic cell-to-cell communication may represent an important bacterial control mechanism. In the present study, we examined extracts of twelve species of Caribbean gorgonian corals, for mechanisms that regulate microbial colonization, such as antibacterial activity and QS regulatory activity. Ethanol extracts of gorgonians collected from Puerto Rico and the Florida Keys showed a range of both antibacterial and QS activities using a specific Pseudomonas aeruginosa QS reporter, sensitive to long chain AHLs and a short chain N-acylhomoserine lactones (AHL biosensor, Chromobacterium violaceium. Overall, the gorgonian corals had higher antimicrobial activity against non-marine strains when compared to marine strains. Pseudopterogorgia americana, Pseusopterogorgia acerosa, and Pseudoplexuara flexuosa had the highest QS inhibitory effect. Interestingly, Pseudoplexuara porosa extracts stimulated QS activity with a striking 17-fold increase in signal. The stimulation of QS by P. porosa or other elements of the holobiont may encourage colonization or recruitment of specific microbial species. Overall, these results suggest the presence of novel stimulatory QS, inhibitory QS and bactericidal compounds in gorgonian corals. A better understanding of these compounds may reveal insight into coral-microbial ecology and whether a therapeutic potential exists.

  15. Designing the Microbial Research Commons

    Energy Technology Data Exchange (ETDEWEB)

    Uhlir, Paul F. [Board on Research Data and Information Policy and Global Affairs, Washington, DC (United States)

    2011-10-01

    Recent decades have witnessed an ever-increasing range and volume of digital data. All elements of the pillars of science--whether observation, experiment, or theory and modeling--are being transformed by the continuous cycle of generation, dissemination, and use of factual information. This is even more so in terms of the re-using and re-purposing of digital scientific data beyond the original intent of the data collectors, often with dramatic results. We all know about the potential benefits and impacts of digital data, but we are also aware of the barriers, the challenges in maximizing the access, and use of such data. There is thus a need to think about how a data infrastructure can enhance capabilities for finding, using, and integrating information to accelerate discovery and innovation. How can we best implement an accessible, interoperable digital environment so that the data can be repeatedly used by a wide variety of users in different settings and with different applications? With this objective: to use the microbial communities and microbial data, literature, and the research materials themselves as a test case, the Board on Research Data and Information held an International Symposium on Designing the Microbial Research Commons at the National Academy of Sciences in Washington, DC on 8-9 October 2009. The symposium addressed topics such as models to lower the transaction costs and support access to and use of microbiological materials and digital resources from the perspective of publicly funded research, public-private interactions, and developing country concerns. The overall goal of the symposium was to stimulate more research and implementation of improved legal and institutional models for publicly funded research in microbiology.

  16. Patent protection for microbial technologies.

    Science.gov (United States)

    Sherkow, Jacob S

    2017-11-01

    Microbial technologies often serve as the basis of fundamental research tools in molecular biology. These present a variety of ethical, legal and social issues concerning their patenting. This commentary presents several case studies of these issues across three major microbiological tools: CRISPR, viral vectors and antimicrobial resistance drugs. It concludes that the development of these technologies-both scientifically and commercially-depend, in part, on the patent regime available for each, and researchers' willingness to enforce those patents against others. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  17. Raman Spectroscopy of Microbial Pigments

    Science.gov (United States)

    Edwards, Howell G. M.; Oren, Aharon

    2014-01-01

    Raman spectroscopy is a rapid nondestructive technique providing spectroscopic and structural information on both organic and inorganic molecular compounds. Extensive applications for the method in the characterization of pigments have been found. Due to the high sensitivity of Raman spectroscopy for the detection of chlorophylls, carotenoids, scytonemin, and a range of other pigments found in the microbial world, it is an excellent technique to monitor the presence of such pigments, both in pure cultures and in environmental samples. Miniaturized portable handheld instruments are available; these instruments can be used to detect pigments in microbiological samples of different types and origins under field conditions. PMID:24682303

  18. Hydrogen production from microbial strains

    Science.gov (United States)

    Harwood, Caroline S; Rey, Federico E

    2012-09-18

    The present invention is directed to a method of screening microbe strains capable of generating hydrogen. This method involves inoculating one or more microbes in a sample containing cell culture medium to form an inoculated culture medium. The inoculated culture medium is then incubated under hydrogen producing conditions. Once incubating causes the inoculated culture medium to produce hydrogen, microbes in the culture medium are identified as candidate microbe strains capable of generating hydrogen. Methods of producing hydrogen using one or more of the microbial strains identified as well as the hydrogen producing strains themselves are also disclosed.

  19. Microbial Forensics: A Scientific Assessment

    Energy Technology Data Exchange (ETDEWEB)

    Keim, Paul

    2003-02-17

    Microorganisms have been used as weapons in criminal acts, most recently highlighted by the terrorist attack using anthrax in the fall of 2001. Although such ''biocrimes'' are few compared with other crimes, these acts raise questions about the ability to provide forensic evidence for criminal prosecution that can be used to identify the source of the microorganisms used as a weapon and, more importantly, the perpetrator of the crime. Microbiologists traditionally investigate the sources of microorganisms in epidemiological investigations, but rarely have been asked to assist in criminal investigations. A colloquium was convened by the American Academy of Microbiology in Burlington, Vermont, on June 7-9, 2002, in which 25 interdisciplinary, expert scientists representing evolutionary microbiology, ecology, genomics, genetics, bioinformatics, forensics, chemistry, and clinical microbiology, deliberated on issues in microbial forensics. The colloquium's purpose was to consider issues relating to microbial forensics, which included a detailed identification of a microorganism used in a bioattack and analysis of such a microorganism and related materials to identify its forensically meaningful source--the perpetrators of the bioattack. The colloquium examined the application of microbial forensics to assist in resolving biocrimes with a focus on what research and education are needed to facilitate the use of microbial forensics in criminal investigations and the subsequent prosecution of biocrimes, including acts of bioterrorism. First responders must consider forensic issues, such as proper collection of samples to allow for optimal laboratory testing, along with maintaining a chain of custody that will support eventual prosecution. Because a biocrime may not be immediately apparent, a linkage must be made between routine diagnosis, epidemiological investigation, and criminal investigation. There is a need for establishing standard operating

  20. Non-microbial sources of microbial volatile organic compounds.

    Science.gov (United States)

    Choi, Hyunok; Schmidbauer, Norbert; Bornehag, Carl-Gustaf

    2016-07-01

    The question regarding the true sources of the purported microbial volatile organic compounds (MVOCs) remains unanswered. To identify microbial, as well as non-microbial sources of 28 compounds, which are commonly accepted as microbial VOCs (i.e. primary outcome of interest is Σ 28 VOCs). In a cross-sectional investigation of 390 homes, six building inspectors assessed water/mold damage, took air and dust samples, and measured environmental conditions (i.e., absolute humidity (AH, g/m(3)), temperature (°C), ventilation rate (ACH)). The air sample was analyzed for volatile organic compounds (μg/m(3)) and; dust samples were analyzed for total viable fungal concentration (CFU/g) and six phthalates (mg/g dust). Four benchmark variables of the underlying sources were defined as highest quartile categories of: 1) the total concentration of 17 propylene glycol and propylene glycol ethers (Σ17 PGEs) in the air sample; 2) 2,2,4-trimethyl-1,3-pentanediol monoisobutyrate (TMPD-MIB) in the air sample; 3) semi-quantitative mold index; and 4) total fungal load (CFU/g). Within severely damp homes, co-occurrence of the highest quartile concentration of either Σ17 PGEs or TMPD-MIB were respectively associated with a significantly higher median concentration of Σ 28 VOCs (8.05 and 13.38μg/m(3), respectively) compared to the reference homes (4.30 and 4.86μg/m(3), respectively, both Ps ≤0.002). Furthermore, the homes within the highest quartile range for Σ fungal load as well as AH were associated with a significantly increased median Σ 28 VOCs compared to the reference group (8.74 vs. 4.32μg/m(3), P=0.001). Within the final model of multiple indoor sources on Σ 28 VOCs, one natural log-unit increase in summed concentration of Σ17 PGEs, plus TMPD-MIB (Σ 17 PGEs + TMPD-MIB) was associated with 1.8-times (95% CI, 1.3-2.5), greater likelihood of having a highest quartile of Σ 28 VOCs, after adjusting for absolute humidity, history of repainting at least one room

  1. Origin, development, and impact of mountain laurel thickets on the mixed-oak forests of the central Appalachian Mountains, USA

    Science.gov (United States)

    Patrick H. Brose

    2016-01-01

    Throughout forests of the northern hemisphere, some species of ericaceous shrubs can form persistent understories that interfere with forest regeneration processes. In the Appalachian Mountains of eastern North America, mountain laurel (Kalmia latifolia) may interfere in the regeneration of mixed-oak (Quercus spp.) forests. To...

  2. Assessment of the effects of microbially influenced degradation on a massive concrete structure. Final report, Report 5

    International Nuclear Information System (INIS)

    Rogers, R.D.

    1995-01-01

    There is a need to estimate the effect of environmental conditions on construction materials to be used in the repository at Yucca Mountain. Previous reports from this project have demonstrated that it is important to develop an understanding of microbially influenced degradation (MID) development and its influence on massive concrete structures. Further, it has been shown that the most effective way to obtain quantitative data on the effects of MID on the structural integrity of repository concrete is to study manmade, analog structures known to be susceptible to MID. The cooling tower shell located at the Ohaaki Power Station near Wairakei, New Zealand is such a structure

  3. Productivity of Mountain Reedbugk Redunca Fulvorufula (Afzelius, 1815 at the Mountain Zebra National Park

    Directory of Open Access Journals (Sweden)

    J. D Skinner

    1980-12-01

    Full Text Available Eighty two adult mountain reedbuck Redunca fulvoru- fula were collected during four seasons, autumn, winter, spring and summer at the Mountain Zebra National Park mainly during 1975 and 1976. Body mass and carcass characteristics varied little with season, body mass varying from 24,0-35,5 kg for all buck shot and dressing percentage always exeeded 50. According to KFI animals were all in fair to good condition. Sixty four percent of all ewes were pregnant and 38,5 lactating. Females and males bred throughout the year but there was a peak in births during mid-summer. The species is highly productive, well adapted to the niche it occupies and lends itself to exploitation for meat production.

  4. Manipulatiaon of Biofilm Microbial Ecology

    Energy Technology Data Exchange (ETDEWEB)

    Burkhalter, R.; Macnaughton, S.J.; Palmer, R.J.; Smith, C.A.; Whitaker, K.W.; White, D.C.; Zinn, M.; kirkegaard, R.

    1998-08-09

    The Biofilm mode of growth provides such significant advantages to the members of the consortium that most organisms in important habitats are found in biofilms. The study of factors that allow manipulation of biofilm microbes in the biofilm growth state requires that reproducible biofilms by generated. The most effective monitoring of biofilm formation, succession and desquamation is with on-line monitoring of microbial biofilms with flowcell for direct observation. The biofilm growth state incorporates a second important factor, the heterogeneity in the distribution in time and space of the component members of the biofilm consortium. This heterogeneity is reflected not only in the cellular distribution but in the metabolic activity within a population of cells. Activity and cellular distribution can be mapped in four dimensions with confocal microscopy, and function can be ascertained by genetically manipulated reporter functions for specific genes or by vital stains. The methodology for understanding the microbial ecology of biofilms is now much more readily available and the capacity to manipulate biofilms is becoming an important feature of biotechnology.

  5. Manipulation of Biofilm Microbial Ecology

    Energy Technology Data Exchange (ETDEWEB)

    White, D.C.; Palmer, R.J., Jr.; Zinn, M.; Smith, C.A.; Burkhalter, R.; Macnaughton, S.J.; Whitaker, K.W.; Kirkegaard, R.D.

    1998-08-15

    The biofilm mode of growth provides such significant advantages to the members of the consortium that most organisms in important habitats are found in biofilms. The study of factors that allow manipulation of biofilm microbes in the biofilm growth state requires that reproducible biofilms be generated. The most effective monitoring of biofilm formation, succession and desaturation is with on-line monitoring of microbial biofilms with flowcell for direct observation. The biofilm growth state incorporates a second important factor, the heterogeneity in distribution in time and space of the component members of the biofilm consortium. This heterogeneity is reflected not only in the cellular distribution but in the metabolic activity within a population of cells. Activity and cellular distribution can be mapped in four dimensions with confocal microscopy, and function can be ascertained by genetically manipulated reporter functions for specific genes or by vital stains. The methodology for understanding the microbial ecology of biofilms is now much more readily available and the capacity to manipulate biofilms is becoming an important feature of biotechnology.

  6. Effects of forest expansion on mountain grassland

    DEFF Research Database (Denmark)

    Guidi, Claudia; Magid, Jakob; Rodeghiero, Mirco

    2014-01-01

    Background and aims. Grassland abandonment followed by forest succession is the dominant land-use change in the European Alps. We studied the impact of current forest expansion on mountain grassland on changes in physical soil organic carbon (SOC) fractions along a land-use and management gradient......, focusing on changes in aggregate stability and particulate organic matter (POM). Methods. Four successional stages were investigated: managed grassland, two transitional phases in which grassland abandonment led to colonization by Picea abies (L.) Karst., and old mixed forest dominated by Fagus sylvatica L....... Results. The dimension of aggregates assessed by aggregate size fractionation tended to increase, whereas SOC allocation to stable aggregates assessed by sizedensity fractionation decreased following conversion of grassland to forest (e.g. from 81 to 59 % in the 0–5 cm layer). The amount of SOC stored...

  7. Environmental impact of Yucca Mountain Repository

    International Nuclear Information System (INIS)

    Ahn, Joonhong

    2005-01-01

    Environmental impact of the Yucca Mountain Repository (YMR) has been quantitatively evaluated in terms of the radiotoxicity of transuranic (TRU) and fission-product radionuclides existing in the environment after released from failed packages. Inventory abstraction has been made based on the data published in Final Environmental Impact Statement published by US DOE. Mathematical model and computation code have been developed based on analytical solutions. Environmental impact from the commercial spent nuclear fuel (CSNF) packages is about 90% of the total impact including the contribution from defense waste (DW) packages. Impacts due to isotopes of Cm, Am, Pu and Np, and their decay daughters are dominant, compared with those from fission-product nuclides. Numerical results show that reduction of the TRU nuclides by a factor of 100 makes the impact from CSNF smaller than that from DW. (author)

  8. How hard were the Jura mountains pushed?

    Energy Technology Data Exchange (ETDEWEB)

    Hindle, D

    2008-09-15

    The mechanical twinning of calcite is believed to record past differential stress values, but validating results in the context of past tectonic situations has been rarely attempted. Using assumptions of linear gradients of stress components with depth, a stress gradient based on twinning palaeopiezometry is derived for the Swiss Molasse Basin, the indenter region to the Jura fold and thrust belt. When integrated into a model of the retrodeformed Jura-Molasse system, allowing horizontal stress concentration and conservation along the original taper geometry, the stress profile proves consistent with the position of the Jura-Molasse (ftb-indenter) transition. The model demonstrates mechanically why the Plateau Molasse portion of the Molasse Basin remained relatively undeformed when transmitting tectonic forces applied to the Jura mountains. (author)

  9. How hard were the Jura mountains pushed?

    International Nuclear Information System (INIS)

    Hindle, D.

    2008-01-01

    The mechanical twinning of calcite is believed to record past differential stress values, but validating results in the context of past tectonic situations has been rarely attempted. Using assumptions of linear gradients of stress components with depth, a stress gradient based on twinning palaeopiezometry is derived for the Swiss Molasse Basin, the indenter region to the Jura fold and thrust belt. When integrated into a model of the retrodeformed Jura-Molasse system, allowing horizontal stress concentration and conservation along the original taper geometry, the stress profile proves consistent with the position of the Jura-Molasse (ftb-indenter) transition. The model demonstrates mechanically why the Plateau Molasse portion of the Molasse Basin remained relatively undeformed when transmitting tectonic forces applied to the Jura mountains. (author)

  10. Mountain building in the central Andes

    Science.gov (United States)

    Kono, Masaru; Fukao, Yoshio; Yamamoto, Akihiko

    1989-04-01

    The Central Andes is the middle part of the Andean chain between about 13°S and 27°S, characterized by the parallel running high mountain chains (the Western and Eastern Cordilleras) at the edges of high plateaus with a height of about 4000 m and a width of 200 to 450 km (the Altiplano-Puna). From the examination of geophysical and geological data in this area, including earthquakes, deformation, gravity anomaly, volcanism, uplift history, and plate motion, we conclude that the continued plate subduction with domination of compressive stress over the entire arc system is the main cause of the tectonic style of the Central Andes. We propose that the present cycle of mountain building has continued in the Cenozoic with the most active phase since the Miocene, and that the present subduction angle (30°) is not typical in that period but that subduction with more shallowly dipping oceanic lithosphere has prevailed at least since the Miocene, because of the young and buoyant slab involved. This situation is responsible for the production of a broad zone of partial melt in the mantle above the descending slab. Addition of volcanic materials was not restricted to the western edge (where active volcanoes of the Western Cordillera exist) but extended to the western and central portion of the Altiplano-Puna. The western half of the Central Andes is essentially isostatic because the heat transferred with the volcanic activities softened the crust there. In the eastern edge, the thermal effect is small, and the crust is strongly pushed by the westward moving South American plate. This caused the shortening of crustal blocks due to reverse faulting and folding in the Eastern Cordillera and Amazonian foreland. The magmatism and crustal accretion are dominant at the western end of the mountain system and decrease eastward, while the compression and consequent crustal shortening are strongest at the eastern end and wane toward west. These two processes are superposed between

  11. CHEAT MOUNTAIN ROADLESS AREA, WEST VIRGINIA.

    Science.gov (United States)

    Englund, K.J.; Behum, P.T.

    1984-01-01

    A mineral-resource survey determined that coal is the most important mineral resource in the Cheat Mountain Roadless Area, West Virginia. It is tentatively ranked as high-volatile A to medium-volatile bituminous similar to coal in nearby mining areas, and is primarily of coking quality. Demonstrated coal resources are estimated to total about 11. 6 million short tons in beds more than 28 in. thick in areas of substantiated resource potential and an additional 32. 7 million short tons in beds between 14 and 28 in. thick have been identified. Limestone, shale, clay, and sandstone occur in the area but these commodities are readily available outside the roadless area. Available information suggests little promise for the occurrence of metallic mineral or other energy resources in the area.

  12. Improvements in stabilizing control at Black Mountain

    International Nuclear Information System (INIS)

    Twidle, T.R.; Engelbrecht, P.C.; Koel, J.W.S.

    1986-01-01

    The process flows of the three flotation circuits at the concentrator of the Black Mountain Mineral Development Company (Pty) Ltd are described. Because of the complexity of the circuits and the associated reagent regime, the plant is equipped with a comprehensive range of control equipment. The different process-control strategies are discussed, and the modifications that have been necessary to the stabilizing control loops in the copper, lead, and zinc flotation circuits are shown in detail. It is concluded that the control strategies have continued to bring about benefits and improvements to the process. X-ray fluorescence analysis was employed in the control process. Data is also given on the accuracy of the technique

  13. Craniomandibular osteopathy in two Pyrenean mountain dogs

    International Nuclear Information System (INIS)

    Franch, J.; Cesari, J.R.; Font, J.

    1998-01-01

    Craniomandibular osteopathy was diagnosed in two Pyrenean mountain dogs with a history of mandibular swelling, pain, fever and, in dog 1, lameness. Radiographs demonstrated extensive, active new bone formation on the ventral aspect of the mandibular bodies of both dogs. Dog 2 responded well to treatment but dog 1 was euthanased owing to severe pain, dysphagia and unsuccessful treatment. The mandibles were examined by means of back-scattered scanning electron microscopy and a well arranged mineralised trabecular network of chondroid tissue and woven bone was observed. The mandibular cortical bone under the areas of periosteal proliferation was also affected, showing a looseness of the characteristic compact appearance of lamellar bone. This is the first report of craniomandibular osteopathy in this breed

  14. Environmental radiation protection standards for Yucca Mountain

    International Nuclear Information System (INIS)

    Clark, R.L.

    1996-01-01

    The Environmental Protection Agency (EPA) has been given the responsibility of setting site-specific health and safety standards for the potential repository at Yucca Mountain, Nevada. The same legislation that gave the Agency that responsibility, mandated a study by the National Academy of Sciences (NAS) to provide input into the bases for the EPA standards. The NAS has completed and presented a report to the Agency; this paper summarizes the report's recommendations and conclusions. Following receipt of the report, the Agency opened a comment period and held public meetings to gather comments; the major issues from the comments are summarized. Based upon the report from NAS and the public comments, EPA has started formulating proposed standards which will be known as 40 CFR Part 197. It is planned for the proposal of 40 CFR Part 197 to occur in the summer of 1996

  15. [Decompression problems in diving in mountain lakes].

    Science.gov (United States)

    Bühlmann, A A

    1989-08-01

    The relationship between tolerated high-pressure tissue nitrogen and ambient pressure is practically linear. The tolerated nitrogen high pressure decreases at altitude, as the ambient pressure is lower. Additionally, tissues with short nitrogen half-times have a higher tolerance than tissues which retain nitrogen for longer duration. For the purpose of determining safe decompression routines, the human body can be regarded as consisting of 16 compartments with half-times from 4 to 635 minutes for nitrogen. The coefficients for calculation of the tolerated nitrogen-high pressure in the tissues can be deduced directly from the half-times for nitrogen. We show as application the results of 573 simulated air dives in the pressure-chamber and 544 real dives in mountain lakes in Switzerland (1400-2600 m above sea level) and in Lake Titicaca (3800 m above sea level). They are in accordance with the computed limits of tolerance.

  16. Interface management for the Yucca Mountain Project

    International Nuclear Information System (INIS)

    1988-12-01

    The subject of this report is selection of that portion of physical and informational interfaces that need to be controlled on the Yucca Mountain Project (YMP). Physical interfaces are interactions between physical elements of the mined geologic disposal system; for example, the repository shafts will interface with the shafts in the Exploratory Shaft Facility (ESF), because the ESF shafts will eventually be absorbed into the repository as additional repository shafts. Informational interfaces are interactions involving an exchange of information between organizations working on the mined geologic disposal system; for example, the in situ testing contractor will interact with the site performance assessment contractor and will supply information regarding host rock behavior. This report describes the physical system interfaces that can be identified from analysis of a physical system structure. A discussion of informational interfaces can be found elsewhere. 30 refs., 8 figs., 3 tabs

  17. Rocky Mountain spotted fever in Argentina.

    Science.gov (United States)

    Paddock, Christopher D; Fernandez, Susana; Echenique, Gustavo A; Sumner, John W; Reeves, Will K; Zaki, Sherif R; Remondegui, Carlos E

    2008-04-01

    We describe the first molecular confirmation of Rickettsia rickettsii, the cause of Rocky Mountain spotted fever (RMSF), from a tick vector, Amblyomma cajennense, and from a cluster of fatal spotted fever cases in Argentina. Questing A. cajennense ticks were collected at or near sites of presumed or confirmed cases of spotted fever rickettsiosis in Jujuy Province and evaluated by polymerase chain reaction assays for spotted fever group rickettsiae. DNA of R. rickettsii was amplified from a pool of A. cajennense ticks and from tissues of one of four patients who died during 2003-2004 after illnesses characterized by high fever, severe headache, myalgias, and petechial rash. The diagnosis of spotted fever rickettsiosis was confirmed in the other patients by indirect immunofluorescence antibody and immunohistochemical staining techniques. These findings show the existence of RMSF in Argentina and emphasize the need for clinicians throughout the Americas to consider RMSF in patients with febrile rash illnesses.

  18. Experimental Evaluation of Mountain Bike Suspension Systems

    Directory of Open Access Journals (Sweden)

    J. Titlestad

    2003-01-01

    Full Text Available A significant distinction between competitive mountain bikes is whether they have a suspension system. Research studies indicate that a suspension system gives advantages, but it is difficult to quantify the benefits because they depend on so many variables, including the physiology and psychology of the cyclist, the roughness of the track and the design of the suspension system. A laboratory based test rig has been built that allows the number of variables in the system to be reduced and test conditions to be controlled. The test rig simulates regular impacts of the rear wheel with bumps in a rolling road. The physiological variables of oxygen consumption and heart rate were measured, together with speeds and forces at various points in the system. Physiological and mechanical test results both confirm a significant benefit in using a suspension system on the simulated rough track, with oxygen consumption reduced by around 30 % and power transmitted through the pedals reduced by 30 % to 60 %.

  19. An Affymetrix Microarray Design for Microbial Genotyping

    Science.gov (United States)

    2009-10-01

    les échantillons qui ne se prêtent pas aux méthodes culturales de la microbiologie classique. La puce à ADN est une technologie qui permet la... area of microbial genotyping there are multiple platforms that can identify one or a few microbial targets in a single assay iteration. For most

  20. [Advances in microbial genome reduction and modification].

    Science.gov (United States)

    Wang, Jianli; Wang, Xiaoyuan

    2013-08-01

    Microbial genome reduction and modification are important strategies for constructing cellular chassis used for synthetic biology. This article summarized the essential genes and the methods to identify them in microorganisms, compared various strategies for microbial genome reduction, and analyzed the characteristics of some microorganisms with the minimized genome. This review shows the important role of genome reduction in constructing cellular chassis.

  1. Microbial Biosensors for Selective Detection of Disaccharides

    Science.gov (United States)

    Seven microbial strains were screened for their ability to detect disaccharides as components of Clark-type oxygen biosensors. Sensors responded to varying degrees to maltose, cellobiose, sucrose, and melibiose, but none responded strongly to lactose. Although microbial sensors are relatively nons...

  2. Microbial population changes in tropical agricultural soil ...

    African Journals Online (AJOL)

    STORAGESEVER

    2008-12-17

    Dec 17, 2008 ... Microbial degradation is known to be an efficient process in the in ..... exhibited a great impact on the ecology of the soil by causing drastic ... city of the soil (Dibble and Bartha, 1979). Hydrocarbon .... Atlas RM (1991). Microbial ...

  3. Dynamics of culturable soil microbial communities during ...

    African Journals Online (AJOL)

    Ecological zones impacted significantly (P < 0.05) on bacterial proliferation, but not on fungal growth. Sampling period significantly (P < 0.05) affected microbial density and the semi-arid agroecozone was more supportive of microbial proliferation than the arid zone. A total of nine predominant fungal species belonging to ...

  4. Uses of antimicrobial genes from microbial genome

    Science.gov (United States)

    Sorek, Rotem; Rubin, Edward M.

    2013-08-20

    We describe a method for mining microbial genomes to discover antimicrobial genes and proteins having broad spectrum of activity. Also described are antimicrobial genes and their expression products from various microbial genomes that were found using this method. The products of such genes can be used as antimicrobial agents or as tools for molecular biology.

  5. Microbial composition of guava (Psidium guajava), hibiscus ...

    African Journals Online (AJOL)

    Microbial composition of guava (Psidium guajava), hibiscus (Hibiscus-rosa sinensis), mango (Mangifera indica) and pumpkin (Telfairia occidentalis Hook) ... African Journal of Biotechnology ... The microbial genera isolated from this study showed that, both human and plant pathogens can colonize plants' phyllosphere.

  6. Screening of complex thermophilic microbial community and ...

    African Journals Online (AJOL)

    Screening of complex thermophilic microbial community and application during municipal solid waste aerobic composting. ... African Journal of Biotechnology ... Complex microbial community HP83 and HC181 were applied during municipal solid waste aerobic composting that was carried out in a composting reactor under ...

  7. Microbial growth and substrate utilization kinetics | Okpokwasili ...

    African Journals Online (AJOL)

    Microbial growth on and utilization of environmental contaminants as substrates have been studied by many researchers. Most times, substrate utilization results in removal of chemical contaminant, increase in microbial biomass and subsequent biodegradation of the contaminant. These are all aimed at detoxification of the ...

  8. [Sanitary-hygienic assessment of microbial biofertilizer].

    Science.gov (United States)

    Arkhipchenko, N A; Akhtemava, G A; Lebedeva, T V; Voronina, A A; Makhan'kova, T I; Pavlova, M M; Shteĭntsaĭg, T A

    1991-10-01

    Biological treatment of sewage from pig-breeding complexes allowed to produce microbial biomass and primary sediments. The mixture of these components (1:1) after rendering harmless and drying out become the high effective biofertilizer. The results of chronic experiment on sanitary status of soil (microbial and helminthological indexes) under this biofertilizer usage are discussed, and the harmlessness of it is demonstrated.

  9. Numerical studies of rock-gas flow in Yucca Mountain; Yucca Mountain Site Characterization Project

    Energy Technology Data Exchange (ETDEWEB)

    Ross, B.; Amter, S.; Lu, Ning [Disposal Safety, Inc., Washington, DC (United States)

    1992-02-01

    A computer model (TGIF -- Thermal Gradient Induced Flow) of two-dimensional, steady-state rock-gas flow driven by temperature and humidity differences is described. The model solves for the ``fresh-water head,`` a concept that has been used in models of variable-density water flow but has not previously been applied to gas flow. With this approach, the model can accurately simulate the flows driven by small differences in temperature. The unsaturated tuffs of Yucca Mountain, Nevada, are being studied as a potential site for a repository for high-level nuclear waste. Using the TGIF model, preliminary calculations of rock-gas flow in Yucca Mountain are made for four east-west cross-sections through the mountain. Calculations are made for three repository temperatures and for several assumptions about a possible semi-confining layer above the repository. The gas-flow simulations are then used to calculate travel-time distributions for air and for radioactive carbon-14 dioxide from the repository to the ground surface.

  10. Peat in the mountains of New Guinea

    Directory of Open Access Journals (Sweden)

    G.S. Hope

    2015-11-01

    Full Text Available Peatlands are common in montane areas above 1,000 m in New Guinea and become extensive above 3,000 m in the subalpine zone. In the montane mires, swamp forests and grass or sedge fens predominate on swampy valley bottoms. These mires may be 4–8 m in depth and up to 30,000 years in age. In Papua New Guinea (PNG there is about 2,250 km2 of montane peatland, and Papua Province (the Indonesian western half of the island probably contains much more. Above 3,000 m, peat soils form under blanket bog on slopes as well as on valley floors. Vegetation types include cushion bog, grass bog and sedge fen. Typical peat depths are 0.5‒1 m on slopes, but valley floors and hollows contain up to 10 m of peat. The estimated total extent of mountain peatland is 14,800 km2 with 5,965 km2 in PNG and about 8,800 km2 in Papua Province. The stratigraphy, age structure and vegetation histories of 45 peatland or organic limnic sites above 750 m have been investigated since 1965. These record major vegetation shifts at 28,000, 17,000‒14,000 and 9,000 years ago and a variable history of human disturbance from 14,000 years ago with extensive clearance by the mid-Holocene at some sites. While montane peatlands were important agricultural centres in the Holocene, the introduction of new dryland crops has resulted in the abandonment of some peatlands in the last few centuries. Despite several decades of research, detailed knowledge of the mountain peatlands is poor and this is an obstacle to scientific management.

  11. Characterize Eruptive Processes at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Valentine, G.

    2001-01-01

    This Analysis/Model Report (AMR), ''Characterize Eruptive Processes at Yucca Mountain, Nevada'', presents information about natural volcanic systems and the parameters that can be used to model their behavior. This information is used to develop parameter-value distributions appropriate for analysis of the consequences of volcanic eruptions through a potential repository at Yucca Mountain. Many aspects of this work are aimed at resolution of the Igneous Activity Key Technical Issue (KTI) as identified by the Nuclear Regulatory Commission (NRC 1998, p. 3), Subissues 1 and 2, which address the probability and consequence of igneous activity at the proposed repository site, respectively. Within the framework of the Disruptive Events Process Model Report (PMR), this AMR provides information for the calculations in two other AMRs ; parameters described herein are directly used in calculations in these reports and will be used in Total System Performance Assessment (TSPA). Compilation of this AMR was conducted as defined in the Development Plan, except as noted. The report begins with considerations of the geometry of volcanic feeder systems, which are of primary importance in predicting how much of a potential repository would be affected by an eruption. This discussion is followed by one of the physical and chemical properties of the magmas, which influences both eruptive styles and mechanisms for interaction with radioactive waste packages. Eruptive processes including the ascent velocity of magma at depth, the onset of bubble nucleation and growth in the rising magmas, magma fragmentation, and velocity of the resulting gas-particle mixture are then discussed. The duration of eruptions, their power output, and mass discharge rates are also described. The next section summarizes geologic constraints regarding the interaction between magma and waste packages. Finally, they discuss bulk grain size produced by relevant explosive eruptions and grain shapes

  12. Characterize Eruptive Processes at Yucca Mountain, Nevada

    Energy Technology Data Exchange (ETDEWEB)

    G. Valentine

    2001-12-20

    This Analysis/Model Report (AMR), ''Characterize Eruptive Processes at Yucca Mountain, Nevada'', presents information about natural volcanic systems and the parameters that can be used to model their behavior. This information is used to develop parameter-value distributions appropriate for analysis of the consequences of volcanic eruptions through a potential repository at Yucca Mountain. Many aspects of this work are aimed at resolution of the Igneous Activity Key Technical Issue (KTI) as identified by the Nuclear Regulatory Commission (NRC 1998, p. 3), Subissues 1 and 2, which address the probability and consequence of igneous activity at the proposed repository site, respectively. Within the framework of the Disruptive Events Process Model Report (PMR), this AMR provides information for the calculations in two other AMRs ; parameters described herein are directly used in calculations in these reports and will be used in Total System Performance Assessment (TSPA). Compilation of this AMR was conducted as defined in the Development Plan, except as noted. The report begins with considerations of the geometry of volcanic feeder systems, which are of primary importance in predicting how much of a potential repository would be affected by an eruption. This discussion is followed by one of the physical and chemical properties of the magmas, which influences both eruptive styles and mechanisms for interaction with radioactive waste packages. Eruptive processes including the ascent velocity of magma at depth, the onset of bubble nucleation and growth in the rising magmas, magma fragmentation, and velocity of the resulting gas-particle mixture are then discussed. The duration of eruptions, their power output, and mass discharge rates are also described. The next section summarizes geologic constraints regarding the interaction between magma and waste packages. Finally, they discuss bulk grain size produced by relevant explosive eruptions and grain

  13. Detailed modeling of mountain wave PSCs

    Directory of Open Access Journals (Sweden)

    S. Fueglistaler

    2003-01-01

    Full Text Available Polar stratospheric clouds (PSCs play a key role in polar ozone depletion. In the Arctic, PSCs can occur on the mesoscale due to orographically induced gravity waves. Here we present a detailed study of a mountain wave PSC event on 25-27 January 2000 over Scandinavia. The mountain wave PSCs were intensively observed by in-situ and remote-sensing techniques during the second phase of the SOLVE/THESEO-2000 Arctic campaign. We use these excellent data of PSC observations on 3 successive days to analyze the PSCs and to perform a detailed comparison with modeled clouds. We simulated the 3-dimensional PSC structure on all 3 days with a mesoscale numerical weather prediction (NWP model and a microphysical box model (using best available nucleation rates for ice and nitric acid trihydrate particles. We show that the combined mesoscale/microphysical model is capable of reproducing the PSC measurements within the uncertainty of data interpretation with respect to spatial dimensions, temporal development and microphysical properties, without manipulating temperatures or using other tuning parameters. In contrast, microphysical modeling based upon coarser scale global NWP data, e.g. current ECMWF analysis data, cannot reproduce observations, in particular the occurrence of ice and nitric acid trihydrate clouds. Combined mesoscale/microphysical modeling may be used for detailed a posteriori PSC analysis and for future Arctic campaign flight and mission planning. The fact that remote sensing alone cannot further constrain model results due to uncertainities in the interpretation of measurements, underlines the need for synchronous in-situ PSC observations in campaigns.

  14. Variation in soil physical, chemical and microbial parameters under different land uses in bagrot valley, gilgit, pakistan

    International Nuclear Information System (INIS)

    Ali, S.

    2017-01-01

    Soil degradation due to unsustainable land use is a global problem and the biggest challenge for sustainability in mountain areas due to their ecological and socio-economic impacts. The study aims to evaluate the variation in the physical, chemical and microbial parameters of soil across various land uses in the Bagrot valley, Central Karakoram National Park (CKNP), Gilgit-Baltistan. Soil samples from 0-20 cm were collected from three land uses such as arable land, pasture, and adjacently located forest. The variables investigated were soil bulk density, total porosity, saturation percentage, sand, silt, clay, pH, electric conductivity, CaCO/sub 3/, organic matter, TN, available P, K, Fe, Mn, Cu and Zn and microbial parameters (16SrRNA and ITS copies number and fungi-to-bacterial ratio). A sigificant varriation in all parameters were found accross the land uses (ANOVA, p < 0.01). Similarly, the highest bulk density, sand, pH, EC, CaCO/sub 3/ were found in arable land, with the lowest values in forest. In contrast, soil under forest showed a higher total porosity, percent saturation, clay, OM, macro and micronutrients, microbial abundance and fungi-to-bacterial ratio than for other land uses. The differences in soil parameters across the land uses indicated detrimental impacts of agricultural activities on soil health. Soil pH and organic matter are the main controlling factors for microbial indicators as well as physical and chemical parameters. The results suggest that restoration of natural vegetation in degraded land and decrease in intensity of land use could improve soil properties in the study area, as well as other similar mountainous regions. (author)

  15. Repository site data report for unsaturated tuff, Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Tien, P.L.; Updegraff, C.D.; Siegel, M.D.; Wahi, K.K.; Guzowski, R.V.

    1985-11-01

    The US Department of Energy is currently considering the thick sequences of unsaturated, fractured tuff at Yucca Mountain, on the southwestern boundary of the Nevada Test Site, as a possible candidate host rock for a nuclear-waste repository. Yucca Mountain is in one of the most arid areas in the United States. The site is within the south-central part of the Great Basin section of the Basin and Range physiographic province and is located near a number of silicic calderas of Tertiary age. Although localized zones of seismic activity are common throughout the province, and faults are present at Yucca Mountain, the site itself is basically aseismic. No data are available on the composition of ground water in the unsaturated zone at Yucca Mountain. It has been suggested that the composition is bounded by the compositions of water from wells USW-H3, UE25p-1, J-13, and snow or rain. There are relatively few data available from Yucca Mountain on the moisture content and saturation, hydraulic conductivity, and characteristic curves of the unsaturated zone. The available literature on thermomechanical properties of tuff does not always distinguish between data from the saturated zone and data from the unsaturated zone. Geochemical, hydrologic, and thermomechanical data available on the unsaturated tuffs of Yucca Mountain are tabulated in this report. Where the data are very sparse, they have been supplemented by data from the saturated zone or from areas other than Yucca Mountain. 316 refs., 58 figs., 37 tabs

  16. Repository site data report for unsaturated tuff, Yucca Mountain, Nevada

    Energy Technology Data Exchange (ETDEWEB)

    Tien, P.L.; Updegraff, C.D.; Siegel, M.D.; Wahi, K.K.; Guzowski, R.V.

    1985-11-01

    The US Department of Energy is currently considering the thick sequences of unsaturated, fractured tuff at Yucca Mountain, on the southwestern boundary of the Nevada Test Site, as a possible candidate host rock for a nuclear-waste repository. Yucca Mountain is in one of the most arid areas in the United States. The site is within the south-central part of the Great Basin section of the Basin and Range physiographic province and is located near a number of silicic calderas of Tertiary age. Although localized zones of seismic activity are common throughout the province, and faults are present at Yucca Mountain, the site itself is basically aseismic. No data are available on the composition of ground water in the unsaturated zone at Yucca Mountain. It has been suggested that the composition is bounded by the compositions of water from wells USW-H3, UE25p-1, J-13, and snow or rain. There are relatively few data available from Yucca Mountain on the moisture content and saturation, hydraulic conductivity, and characteristic curves of the unsaturated zone. The available literature on thermomechanical properties of tuff does not always distinguish between data from the saturated zone and data from the unsaturated zone. Geochemical, hydrologic, and thermomechanical data available on the unsaturated tuffs of Yucca Mountain are tabulated in this report. Where the data are very sparse, they have been supplemented by data from the saturated zone or from areas other than Yucca Mountain. 316 refs., 58 figs., 37 tabs.

  17. Winter Tourism and mountain wetland management and restoration

    Science.gov (United States)

    Gaucherand, S.; Mauz, I.

    2012-04-01

    The degradation and loss of wetlands is more rapid than that of other ecosystems (MEA 2005). In mountains area, wetlands are small and scattered and particularly sensitive to global change. The development of ski resorts can lead to the destruction or the deterioration of mountain wetlands because of hydrologic interferences, fill in, soil compression and erosion, etc. Since 2008, we have studied a high altitude wetland complex in the ski resort of Val Thorens. The aim of our study was to identify the impacts of mountain tourism development (winter and summer tourism) on wetland functioning and to produce an action plan designed to protect, rehabilitate and value the wetlands. We chose an approach based on multi-stakeholder participatory process at every stage, from information gathering to technical choices and monitoring. In this presentation, we show how such an approach can efficiently improve the consideration of wetlands in the development of a ski resort, but also the bottlenecks that need to be overcome. We will also discuss some of the ecological engineering techniques used to rehabilitate or restore high altitude degraded wetlands. Finally, this work has contributed to the creation in 2012 of a mountain wetland observatory coordinated by the conservatory of Haute-Savoie. The objective of this observatory is to estimate ecosystem services furnished by mountain wetlands and to find restoration strategies adapted to the local socio-economical context (mountain agriculture and mountain tourism).

  18. Microbial biofilms: biosurfactants as antibiofilm agents.

    Science.gov (United States)

    Banat, Ibrahim M; De Rienzo, Mayri A Díaz; Quinn, Gerry A

    2014-12-01

    Current microbial inhibition strategies based on planktonic bacterial physiology have been known to have limited efficacy on the growth of biofilm communities. This problem can be exacerbated by the emergence of increasingly resistant clinical strains. All aspects of biofilm measurement, monitoring, dispersal, control, and inhibition are becoming issues of increasing importance. Biosurfactants have merited renewed interest in both clinical and hygienic sectors due to their potential to disperse microbial biofilms in addition to many other advantages. The dispersal properties of biosurfactants have been shown to rival those of conventional inhibitory agents against bacterial and yeast biofilms. This makes them suitable candidates for use in new generations of microbial dispersal agents and for use as adjuvants for existing microbial suppression or eradication strategies. In this review, we explore aspects of biofilm characteristics and examine the contribution of biologically derived surface-active agents (biosurfactants) to the disruption or inhibition of microbial biofilms.

  19. Statistical Physics Approaches to Microbial Ecology

    Science.gov (United States)

    Mehta, Pankaj

    The unprecedented ability to quantitatively measure and probe complex microbial communities has renewed interest in identifying the fundamental ecological principles governing community ecology in microbial ecosystems. Here, we present work from our group and others showing how ideas from statistical physics can help us uncover these ecological principles. Two major lessons emerge from this work. First, large, ecosystems with many species often display new, emergent ecological behaviors that are absent in small ecosystems with just a few species. To paraphrase Nobel laureate Phil Anderson, ''More is Different'', especially in community ecology. Second, the lack of trophic layer separation in microbial ecology fundamentally distinguishes microbial ecology from classical paradigms of community ecology and leads to qualitative different rules for community assembly in microbes. I illustrate these ideas using both theoretical modeling and novel new experiments on large microbial ecosystems performed by our collaborators (Joshua Goldford and Alvaro Sanchez). Work supported by Simons Investigator in MMLS and NIH R35 R35 GM119461.

  20. Microbial heterotrophic metabolic rates constrain the microbial carbon pump

    Digital Repository Service at National Institute of Oceanography (India)

    Robinson, C.; Ramaiah, N.

    (2008). 10. P.A. del Giorgio, J. J. Cole, in MicrobialEcologyoftheOceans D. L. Kirchman Ed. (JohnWiley & Sons, Inc. NewYork ed. 1. 2000),pp. 289–325. 11. A. B. Burd etal., DeepSeaRes.II 57, 1557 (2010). 12. S. Martinez-García, E. Fernández, M.... R.A. Straza, D. L. Kirchman, Aquat.Microb.Ecol. 62, 267(2011). 16. O. Hoegh-Guldberg, J. F. Bruno, Science 328,1523 (2010). 17. J. Piontek, M. Lunau, N. Handel, C. Borchard, M.Wurst,A. Engel, Biogeosciences 7, 1615 (2010). 18. J. K.Apple, P.A. del...

  1. Microbial populations in contaminant plumes

    Science.gov (United States)

    Haack, Sheridan K.; Bekins, Barbara A.

    Efficient biodegradation of subsurface contaminants requires two elements: (1) microbial populations with the necessary degradative capabilities, and (2) favorable subsurface geochemical and hydrological conditions. Practical constraints on experimental design and interpretation in both the hydrogeological and microbiological sciences have resulted in limited knowledge of the interaction between hydrogeological and microbiological features of subsurface environments. These practical constraints include: (1) inconsistencies between the scales of investigation in the hydrogeological and microbiological sciences, and (2) practical limitations on the ability to accurately define microbial populations in environmental samples. However, advances in application of small-scale sampling methods and interdisciplinary approaches to site investigations are beginning to significantly improve understanding of hydrogeological and microbiological interactions. Likewise, culture-based and molecular analyses of microbial populations in subsurface contaminant plumes have revealed significant adaptation of microbial populations to plume environmental conditions. Results of recent studies suggest that variability in subsurface geochemical and hydrological conditions significantly influences subsurface microbial-community structure. Combined investigations of site conditions and microbial-community structure provide the knowledge needed to understand interactions between subsurface microbial populations, plume geochemistry, and contaminant biodegradation. La biodégradation efficace des polluants souterrains requiert deux éléments: des populations microbiennes possédant les aptitudes nécessaires à la dégradation, et des conditions géochimiques et hydrologiques souterraines favorables. Des contraintes pratiques sur la conception et l'interprétation des expériences à la fois en microbiologie et en hydrogéologie ont conduit à une connaissance limitée des interactions entre les

  2. Inter-specific competition, but not different soil microbial communities, affects N chemical forms uptake by competing graminoids of upland grasslands.

    Directory of Open Access Journals (Sweden)

    Eduardo Medina-Roldán

    Full Text Available Evidence that plants differ in their ability to take up both organic (ON and inorganic (IN forms of nitrogen (N has increased ecologists' interest on resource-based plant competition. However, whether plant uptake of IN and ON responds to differences in soil microbial community composition and/or functioning has not yet been explored, despite soil microbes playing a key role in N cycling. Here, we report results from a competition experiment testing the hypothesis that soil microbial communities differing in metabolic activity as a result of long-term differences to grazing exposure could modify N uptake of Eriophorum vaginatum L. and Nardus stricta L. These graminoids co-occur on nutrient-poor, mountain grasslands where E. vaginatum decreases and N. stricta increases in response to long-term grazing. We inoculated sterilised soil with soil microbial communities from continuously grazed and ungrazed grasslands and planted soils with both E. vaginatum and N. stricta, and then tracked uptake of isotopically labelled NH(4 (+ (IN and glycine (ON into plant tissues. The metabolically different microbial communities had no effect on N uptake by either of the graminoids, which might suggest functional equivalence of soil microbes in their impacts on plant N uptake. Consistent with its dominance in soils with greater concentrations of ON relative to IN in the soluble N pool, Eriophorum vaginatum took up more glycine than N. stricta. Nardus stricta reduced the glycine proportion taken up by E. vaginatum, thus increasing niche overlap in N usage between these species. Local abundances of these species in mountain grasslands are principally controlled by grazing and soil moisture, although our results suggest that changes in the relative availability of ON to IN can also play a role. Our results also suggest that coexistence of these species in mountain grasslands is likely based on non-equilibrium mechanisms such as disturbance and/or soil heterogeneity.

  3. MOUNTAIN-SCALE COUPLED PROCESSES (TH/THC/THM)MODELS

    Energy Technology Data Exchange (ETDEWEB)

    Y.S. Wu

    2005-08-24

    This report documents the development and validation of the mountain-scale thermal-hydrologic (TH), thermal-hydrologic-chemical (THC), and thermal-hydrologic-mechanical (THM) models. These models provide technical support for screening of features, events, and processes (FEPs) related to the effects of coupled TH/THC/THM processes on mountain-scale unsaturated zone (UZ) and saturated zone (SZ) flow at Yucca Mountain, Nevada (BSC 2005 [DIRS 174842], Section 2.1.1.1). The purpose and validation criteria for these models are specified in ''Technical Work Plan for: Near-Field Environment and Transport: Coupled Processes (Mountain-Scale TH/THC/THM, Drift-Scale THC Seepage, and Drift-Scale Abstraction) Model Report Integration'' (BSC 2005 [DIRS 174842]). Model results are used to support exclusion of certain FEPs from the total system performance assessment for the license application (TSPA-LA) model on the basis of low consequence, consistent with the requirements of 10 CFR 63.342 [DIRS 173273]. Outputs from this report are not direct feeds to the TSPA-LA. All the FEPs related to the effects of coupled TH/THC/THM processes on mountain-scale UZ and SZ flow are discussed in Sections 6 and 7 of this report. The mountain-scale coupled TH/THC/THM processes models numerically simulate the impact of nuclear waste heat release on the natural hydrogeological system, including a representation of heat-driven processes occurring in the far field. The mountain-scale TH simulations provide predictions for thermally affected liquid saturation, gas- and liquid-phase fluxes, and water and rock temperature (together called the flow fields). The main focus of the TH model is to predict the changes in water flux driven by evaporation/condensation processes, and drainage between drifts. The TH model captures mountain-scale three-dimensional flow effects, including lateral diversion and mountain-scale flow patterns. The mountain-scale THC model evaluates TH effects on

  4. MOUNTAIN-SCALE COUPLED PROCESSES (TH/THC/THM) MODELS

    International Nuclear Information System (INIS)

    Y.S. Wu

    2005-01-01

    This report documents the development and validation of the mountain-scale thermal-hydrologic (TH), thermal-hydrologic-chemical (THC), and thermal-hydrologic-mechanical (THM) models. These models provide technical support for screening of features, events, and processes (FEPs) related to the effects of coupled TH/THC/THM processes on mountain-scale unsaturated zone (UZ) and saturated zone (SZ) flow at Yucca Mountain, Nevada (BSC 2005 [DIRS 174842], Section 2.1.1.1). The purpose and validation criteria for these models are specified in ''Technical Work Plan for: Near-Field Environment and Transport: Coupled Processes (Mountain-Scale TH/THC/THM, Drift-Scale THC Seepage, and Drift-Scale Abstraction) Model Report Integration'' (BSC 2005 [DIRS 174842]). Model results are used to support exclusion of certain FEPs from the total system performance assessment for the license application (TSPA-LA) model on the basis of low consequence, consistent with the requirements of 10 CFR 63.342 [DIRS 173273]. Outputs from this report are not direct feeds to the TSPA-LA. All the FEPs related to the effects of coupled TH/THC/THM processes on mountain-scale UZ and SZ flow are discussed in Sections 6 and 7 of this report. The mountain-scale coupled TH/THC/THM processes models numerically simulate the impact of nuclear waste heat release on the natural hydrogeological system, including a representation of heat-driven processes occurring in the far field. The mountain-scale TH simulations provide predictions for thermally affected liquid saturation, gas- and liquid-phase fluxes, and water and rock temperature (together called the flow fields). The main focus of the TH model is to predict the changes in water flux driven by evaporation/condensation processes, and drainage between drifts. The TH model captures mountain-scale three-dimensional flow effects, including lateral diversion and mountain-scale flow patterns. The mountain-scale THC model evaluates TH effects on water and gas

  5. 75 FR 29686 - Proposed Establishment of the Pine Mountain-Mayacmas Viticultural Area

    Science.gov (United States)

    2010-05-27

    ... states that local growers report that Pine Mountain vineyards are naturally free of mildew, a vineyard... often stall over Pine Mountain and the Mayacmas range, dropping more rain than in other areas. Pine..., these mountain soils include large amounts of sand and gravel. Pine Mountain soils are generally less...

  6. 75 FR 29656 - Amendment of Class E Airspace; Mountain View, AR

    Science.gov (United States)

    2010-05-27

    ...-1181; Airspace Docket No. 09-ASW-36] Amendment of Class E Airspace; Mountain View, AR AGENCY: Federal... Mountain View, AR. Decommissioning of the Wilcox non-directional beacon (NDB) at Mountain View Wilcox Memorial Field Airport, Mountain View, AR, has made this action necessary to enhance the safety and...

  7. Mantle Subduction and Uplift of Intracontinental Mountains: A Case Study from the Chinese Tianshan Mountains within Eurasia.

    Science.gov (United States)

    Li, Jinyi; Zhang, Jin; Zhao, Xixi; Jiang, Mei; Li, Yaping; Zhu, Zhixin; Feng, Qianwen; Wang, Lijia; Sun, Guihua; Liu, Jianfeng; Yang, Tiannan

    2016-06-29

    The driving mechanism that is responsible for the uplift of intracontinental mountains has puzzled geologists for decades. This study addresses this issue by using receiver function images across the Chinese Tianshan Mountains and available data from both deep seismic profiles and surface structural deformation. The near-surface structural deformation shows that the Tianshan crust experienced strong shortening during the Cenozoic. The receiver function image across the Tianshan Mountains reveals that the lithosphere of the Junggar Basin to the north became uncoupled along the Moho, and the mantle below the Moho subducted southwards beneath the northern part of the Tianshan Mountains, thereby thickening the overlying crust. Similar deep structures, however, are not observed under the Tarim Basin and the adjacent southern Tianshan Mountains. This difference in the deep structures correlates with geomorphological features in the region. Thus, a new model of mantle subduction, herein termed M-type subduction, is proposed for the mountain-building processes in intracontinental compressional settings. The available geomorphological, geological and seismic data in the literatures show that this model is probably suitable for other high, linear mountains within the continent.

  8. Hyporheic Interfaces Serve as Ecological Control Points for Mountainous Landscape Biological Productivity

    Science.gov (United States)

    Newcomer, M. E.; Dwivedi, D.; Raberg, J.; Fox, P. M.; Nico, P. S.; Wainwright, H. M.; Conrad, M. E.; Bill, M.; Bouskill, N.; Williams, K. H.; Hubbard, S.; Steefel, C. I.

    2017-12-01

    Riverine systems in snow-dominated mountainous regions often express complex biogeochemistry and river nutrient indicators as a function of hydrologic variability. In early spring, meltwater infiltration from a ripened snowpack creates a hydrological gradient through hillslopes, floodplains, and hyporheic zones. During this time, these systems are more-or-less a passive filter that allows the rising limb of the hydrograph to display chemo-dynamic relationships (inversely proportional) with solutes and nutrients. During the growing season, temperatures, plants, microbes, and hydrologic gradients shift dramatically and activate hyporheic-zone biogeochemistry as a major control on water nutrient degradation. Hyporheic biogeochemical reliance on the timing of meltwater infiltration and the possibility of a longer vernal window under future climate change indicates the importance of hyporheic cycling as the dominant ecological control point on carbon and nitrogen fluxes and transformations. The objective of our study is to develop a predictive understanding of the subsurface and surface controls on hyporheic biogeochemical behavior through data-model integration. Data from our 2017 field campaign in the East River, Colorado, a pristine, mountainous watershed, were taken at key times during the rising, peak, falling, and dry limb of the hydrograph. Throughout multiple locations across this spatial and temporal gradient, we measured surface and subsurface gases, geochemistry, isotopes, and hydrological flow conditions and used this data to constrain a numerical flow and reactive transport model of the hyporheic zone that included microbial and flow feedback dynamics. Our data coupled with the predictive power of our numerical model reveal that the hyporheic zone serves dual roles throughout the year—as a net source of nutrients and solutes during the early vernal phase, shifting to a net sink of nutrients during the summer dry season. The possibility of a future

  9. Emissions Of Forest Fires In The Amazon: Impact On The Tropical Mountain Forest In Ecuador

    Science.gov (United States)

    Fabian, P.; Rollenbeck, R.; Thiemens, M. H.; Brothers, L.

    2006-12-01

    Biomass burning is a source of carbon, sulphur, and nitrogen compounds which, along with their photochemically generated reaction products, can be transported over very large distances, even traversing oceans. Four years of regular rain and fog-water measurements in the tropical mountain forest at the eastern slopes of the Ecuadorian Andes, along an altitude profile between 1800 m and 3185 m, have been carried out. The ion composition of rain and fog-water samples shows frequent episodes of significantly enhanced nitrogen and sulphur, resulting in annual deposition rates of about 5 kg N/ha and 10 kg S/ha into this ecosystem, which are comparable to those of polluted central Europe. By relating back trajectories calculated by means of the FLEXTRA model to the distributions of satellite derived forest fire pixels, it can be shown that most episodes of enhanced ion concentration, with pH values as low as 4.0, can be attributed to biomass burning in the Amazon. First analyses of oxygen isotopes 16O, 17O, and 18O of nitrate in fogwater samples show mass independent fractionation values ranging between 15 and 20 per mille, clearly indicating that nitrate in the samples is a product of atmospheric conversion of precursors, while the isotope data of river samples taken downstream of the research area are grouped in the region of microbial nitrate. This strongly supports the aforementioned trajectory results and shows that the tropical mountain forest in Ecuador, with local pollution sources missing,is "fertilized" by long-range transport of substances originating from forest fires in Colombia, Venezuela, Brazil, and Peru, far upwind of the research site.

  10. Microbial reduction of iron ore

    Science.gov (United States)

    Hoffmann, M.R.; Arnold, R.G.; Stephanopoulos, G.

    1989-11-14

    A process is provided for reducing iron ore by treatment with microorganisms which comprises forming an aqueous mixture of iron ore, microorganisms operable for reducing the ferric iron of the iron ore to ferrous iron, and a substrate operable as an energy source for the microbial reduction; and maintaining the aqueous mixture for a period of time and under conditions operable to effect the reduction of the ore. Preferably the microorganism is Pseudomonas sp. 200 and the reduction conducted anaerobically with a domestic wastewater as the substrate. An aqueous solution containing soluble ferrous iron can be separated from the reacted mixture, treated with a base to precipitate ferrous hydroxide which can then be recovered as a concentrated slurry. 11 figs.

  11. Growth Mechanism of Microbial Colonies

    Science.gov (United States)

    Zhu, Minhui; Martini, K. Michael; Kim, Neil H.; Sherer, Nicholas; Lee, Jia Gloria; Kuhlman, Thomas; Goldenfeld, Nigel

    Experiments on nutrient-limited E. coli colonies, growing on agar gel from single cells reveal a power-law distribution of sizes, both during the growth process and in the final stage when growth has ceased. We developed a Python simulation to study the growth mechanism of the bacterial population and thus understand the broad details of the experimental findings. The simulation takes into account nutrient uptake, metabolic function, growth and cell division. Bacteria are modeled in two dimensions as hard circle-capped cylinders with steric interactions and elastic stress dependent growth characteristics. Nutrient is able to diffuse within and between the colonies. The mechanism of microbial colony growth involves reproduction of cells within the colonies and the merging of different colonies. We report results on the dynamic scaling laws and final state size distribution, that capture in semi-quantitative detail the trends observed in experiment. Supported by NSF Grant 0822613.

  12. Conditioning biomass for microbial growth

    Science.gov (United States)

    Bodie, Elizabeth A; England, George

    2015-03-31

    The present invention relates to methods for improving the yield of microbial processes that use lignocellulose biomass as a nutrient source. The methods comprise conditioning a composition comprising lignocellulose biomass with an enzyme composition that comprises a phenol oxidizing enzyme. The conditioned composition can support a higher rate of growth of microorganisms in a process. In one embodiment, a laccase composition is used to condition lignocellulose biomass derived from non-woody plants, such as corn and sugar cane. The invention also encompasses methods for culturing microorganisms that are sensitive to inhibitory compounds in lignocellulose biomass. The invention further provides methods of making a product by culturing the production microorganisms in conditioned lignocellulose biomass.

  13. Microbial life in geothermal waters

    Energy Technology Data Exchange (ETDEWEB)

    Sand, W. [Universitaet Hamburg (Germany). Mikrobiologie

    2003-12-01

    Geothermal waters usually contain many salts, often in varying concentrations. Some of these salts, especially if they are oxidizable or reducible, may be subject to microbial conversion and/or (bio)precipitation. Microorganisms can oxidize, sometimes even under anoxic (absence of oxygen) conditions, reduced sulfur compounds, iron (II) ions, and manganese (II) ions, to mention just a few of the most important. On the other hand, partially or fully oxidized compounds can be reduced by microorganisms, for example sulfur compounds, iron (III) ions, manganese (IV) ions, nitrogen oxides such as nitrite and nitrate, and, finally, bicarbonate and carbonate ions. If organic compounds are present, these may also be oxidized or reduced. A multitude of these microorganisms are able to perform such a metabolism under aerobic or anoxic conditions. All these (bio)processes allow bacteria to grow and proliferate. The consequences include biocorrosion and biodeterioration. The growth requirements and the biodeterioration mechanisms will be discussed in this review. (author)

  14. Antibiotic tolerance and microbial biofilms

    DEFF Research Database (Denmark)

    Folkesson, Anders

    Increased tolerance to antimicrobial agents is thought to be an important feature of microbes growing in biofilms. We study the dynamics of antibiotic action within hydrodynamic flow chamber biofilms of Escherichia coli and Pseudomonas aeruginosa using isogenic mutants and fluorescent gene...... expression reporters and we address the question of how biofilm organization affects antibiotic susceptibility. The dynamics of microbial killing is monitored by viable count determination, and confocal laser microscopy. Our work shows that the apparent increased antibiotic tolerance is due to the formation...... of antibiotic tolerant subpopulations within the biofilm. The formation of these subpopulations is highly variable and dependent on the antibiotic used, the biofilm structural organization and the induction of specific tolerance mechanisms....

  15. Theoretical microbial ecology without species

    Science.gov (United States)

    Tikhonov, Mikhail

    2017-09-01

    Ecosystems are commonly conceptualized as networks of interacting species. However, partitioning natural diversity of organisms into discrete units is notoriously problematic and mounting experimental evidence raises the intriguing question whether this perspective is appropriate for the microbial world. Here an alternative formalism is proposed that does not require postulating the existence of species as fundamental ecological variables and provides a naturally hierarchical description of community dynamics. This formalism allows approaching the species problem from the opposite direction. While the classical models treat a world of imperfectly clustered organism types as a perturbation around well-clustered species, the presented approach allows gradually adding structure to a fully disordered background. The relevance of this theoretical construct for describing highly diverse natural ecosystems is discussed.

  16. Soil Biogeochemical and Microbial Feedbacks along a Snowmelt-Dominated Hillslope-to-Floodplain Transect in Colorado.

    Science.gov (United States)

    Sorensen, P.; Beller, H. R.; Bill, M.; Bouskill, N.; Brodie, E.; Chakraborty, R.; Conrad, M. E.; Karaoz, U.; Polussa, A.; Steltzer, H.; Wang, S.; Williams, K. H.; Wilmer, C.; Wu, Y.

    2017-12-01

    Nitrogen export from mountainous watersheds is a product of multiple interactions among hydrological processes and soil-microbial-plant feedbacks along the continuum from terrestrial to aquatic environments. In snow-dominated systems, like the East River Watershed (CO), seasonal processes such as snowmelt exert significant influence on the annual hydrologic cycle and may also link spatially distinct catchment subsystems, such as hillslope and adjoining riparian floodplains. Further, snowmelt is occurring earlier each year and this is predicted to result in a temporal asynchrony between historically coupled microbial nutrient release and plant nutrient demand in spring, with the potential to increase N export from the East River Watershed. Here we summarize biogeochemical data collected along a hillslope-to-riparian floodplain transect at the East River site. Starting in Fall 2016, we sampled soils at 3 depths and measured dissolved pools of soil nutrients (e.g., NH4+, NO3-, DOC, P), microbial biomass CN, and microbial community composition over a seasonal time course, through periods of snow accumulation, snowmelt, and plant senescence. Soil moisture content in the top 5 cm of floodplain soils was nearly 4X greater across sampling dates, coinciding with 2X greater microbial biomass C, larger extractable pools of NH4+, and smaller pools of NO3- in floodplain vs. hillslope soils. These results suggest that microbially mediated redox processes played an important role in N cycling along the transect. Hillslope vs. floodplain location also appeared to be a key factor that differentiated soil microbial communities (e.g., a more important factor than seasonality or soil depth or type). Snow accumulation and snowmelt exerted substantial influence on soil biogeochemistry. For example, microbial biomass accumulation increased about 2X beneath the winter snowpack. Snowmelt resulted in a precipitous crash in the microbial population, with 2.5X reductions in floodplain and 2X

  17. Molecular biology of microbial hydrogenases.

    Science.gov (United States)

    Vignais, P M; Colbeau, A

    2004-07-01

    Hydrogenases (H2ases) are metalloproteins. The great majority of them contain iron-sulfur clusters and two metal atoms at their active center, either a Ni and an Fe atom, the [NiFe]-H2ases, or two Fe atoms, the [FeFe]-H2ases. Enzymes of these two classes catalyze the reversible oxidation of hydrogen gas (H2 2 H+ + 2 e-) and play a central role in microbial energy metabolism; in addition to their role in fermentation and H2 respiration, H2ases may interact with membrane-bound electron transport systems in order to maintain redox poise, particularly in some photosynthetic microorganisms such as cyanobacteria. Recent work has revealed that some H2ases, by acting as H2-sensors, participate in the regulation of gene expression and that H2-evolving H2ases, thought to be involved in purely fermentative processes, play a role in membrane-linked energy conservation through the generation of a protonmotive force. The Hmd hydrogenases of some methanogenic archaea constitute a third class of H2ases, characterized by the absence of Fe-S cluster and the presence of an iron-containing cofactor with catalytic properties different from those of [NiFe]- and [FeFe]-H2ases. In this review, we emphasise recent advances that have greatly increased our knowledge of microbial H2ases, their diversity, the structure of their active site, how the metallocenters are synthesized and assembled, how they function, how the synthesis of these enzymes is controlled by external signals, and their potential use in biological H2 production.

  18. Microbial ecology of watery kimchi.

    Science.gov (United States)

    Kyung, Kyu Hang; Medina Pradas, Eduardo; Kim, Song Gun; Lee, Yong Jae; Kim, Kyong Ho; Choi, Jin Joo; Cho, Joo Hyong; Chung, Chang Ho; Barrangou, Rodolphe; Breidt, Frederick

    2015-05-01

    The biochemistry and microbial ecology of 2 similar types of watery (mul) kimchi, containing sliced and unsliced radish and vegetables (nabak and dongchimi, respectively), were investigated. Samples from kimchi were fermented at 4, 10, and 20 °C were analyzed by plating on differential and selective media, high-performance liquid chromatography, and high-throughput DNA sequencing of 16S rDNA. Nabak kimchi showed similar trends as dongchimi, with increasing lactic and acetic acids and decreasing pH for each temperature, but differences in microbiota were apparent. Interestingly, bacteria from the Proteobacterium phylum, including Enterobacteriaceae, decreased more rapidly during fermentation at 4 °C in nabak cabbage fermentations compared with dongchimi. Although changes for Proteobacterium and Enterobacteriaceae populations were similar during fermentation at 10 and 20 °C, the homolactic stage of fermentation did not develop for the 4 and 10 °C samples of both nabak and dongchimi during the experiment. These data show the differences in biochemistry and microbial ecology that can result from preparation method and fermentation conditions of the kimchi, which may impact safety (Enterobacteriaceae populations may include pathogenic bacteria) and quality (homolactic fermentation can be undesirable, if too much acid is produced) of the product. In addition, the data also illustrate the need for improved methods for identifying and differentiating closely related lactic acid bacteria species using high-throughput sequencing methods. © 2015 Institute of Food Technologists®. This article has been contributed by US Government employees and their work is in the public domain in the USA.

  19. Denitrification and Biodiversity of Denitrifiers in a High-Mountain Mediterranean Lake

    Directory of Open Access Journals (Sweden)

    Antonio Castellano-Hinojosa

    2017-10-01

    Full Text Available Wet deposition of reactive nitrogen (Nr species is considered a main factor contributing to N inputs, of which nitrate (NO3− is usually the major component in high-mountain lakes. The microbial group of denitrifiers are largely responsible for reduction of nitrate to molecular dinitrogen (N2 in terrestrial and aquatic ecosystems, but the role of denitrification in removal of contaminant nitrates in high-mountain lakes is not well understood. We have used the oligotrophic, high-altitude La Caldera lake in the Sierra Nevada range (Spain as a model to study the role of denitrification in nitrate removal. Dissolved inorganic Nr concentration in the water column of la Caldera, mainly nitrate, decreased over the ice-free season which was not associated with growth of microbial plankton or variations in the ultraviolet radiation. Denitrification activity, estimated as nitrous oxide (N2O production, was measured in the water column and in sediments of the lake, and had maximal values in the month of August. Relative abundance of denitrifying bacteria in sediments was studied by quantitative polymerase chain reaction of the 16S rRNA and the two phylogenetically distinct clades nosZI and nosZII genes encoding nitrous oxide reductases. Diversity of denitrifiers in sediments was assessed using a culture-dependent approach and after the construction of clone libraries employing the nosZI gene as a molecular marker. In addition to genera Polymorphum, Paracoccus, Azospirillum, Pseudomonas, Hyphomicrobium, Thauera, and Methylophaga, which were present in the clone libraries, Arthrobacter, Burkholderia, and Rhizobium were also detected in culture media that were not found in the clone libraries. Analysis of biological activities involved in the C, N, P, and S cycles from sediments revealed that nitrate was not a limiting nutrient in the lake, allowed N2O production and determined denitrifiers’ community structure. All these results indicate that

  20. Denitrification and Biodiversity of Denitrifiers in a High-Mountain Mediterranean Lake

    Science.gov (United States)

    Castellano-Hinojosa, Antonio; Correa-Galeote, David; Carrillo, Presentación; Bedmar, Eulogio J.; Medina-Sánchez, Juan M.

    2017-01-01

    Wet deposition of reactive nitrogen (Nr) species is considered a main factor contributing to N inputs, of which nitrate (NO3−) is usually the major component in high-mountain lakes. The microbial group of denitrifiers are largely responsible for reduction of nitrate to molecular dinitrogen (N2) in terrestrial and aquatic ecosystems, but the role of denitrification in removal of contaminant nitrates in high-mountain lakes is not well understood. We have used the oligotrophic, high-altitude La Caldera lake in the Sierra Nevada range (Spain) as a model to study the role of denitrification in nitrate removal. Dissolved inorganic Nr concentration in the water column of la Caldera, mainly nitrate, decreased over the ice-free season which was not associated with growth of microbial plankton or variations in the ultraviolet radiation. Denitrification activity, estimated as nitrous oxide (N2O) production, was measured in the water column and in sediments of the lake, and had maximal values in the month of August. Relative abundance of denitrifying bacteria in sediments was studied by quantitative polymerase chain reaction of the 16S rRNA and the two phylogenetically distinct clades nosZI and nosZII genes encoding nitrous oxide reductases. Diversity of denitrifiers in sediments was assessed using a culture-dependent approach and after the construction of clone libraries employing the nosZI gene as a molecular marker. In addition to genera Polymorphum, Paracoccus, Azospirillum, Pseudomonas, Hyphomicrobium, Thauera, and Methylophaga, which were present in the clone libraries, Arthrobacter, Burkholderia, and Rhizobium were also detected in culture media that were not found in the clone libraries. Analysis of biological activities involved in the C, N, P, and S cycles from sediments revealed that nitrate was not a limiting nutrient in the lake, allowed N2O production and determined denitrifiers’ community structure. All these results indicate that denitrification could be a