Acute myeloid leukemia in the era of precision medicine: recent advances in diagnostic classification and risk stratification.

Science.gov (United States)

Kansal, Rina

2016-03-01

Acute myeloid leukemia (AML) is a genetically heterogeneous myeloid malignancy that occurs more commonly in adults, and has an increasing incidence, most likely due to increasing age. Precise diagnostic classification of AML requires clinical and pathologic information, the latter including morphologic, immunophenotypic, cytogenetic and molecular genetic analysis. Risk stratification in AML requires cytogenetics evaluation as the most important predictor, with genetic mutations providing additional necessary information. AML with normal cytogenetics comprises about 40%-50% of all AML, and has been intensively investigated. The currently used 2008 World Health Organization classification of hematopoietic neoplasms has been proposed to be updated in 2016, also to include an update on the classification of AML, due to the continuously increasing application of genomic techniques that have led to major advances in our knowledge of the pathogenesis of AML. The purpose of this review is to describe some of these recent major advances in the diagnostic classification and risk stratification of AML.

Acute myeloid leukemia in the era of precision medicine: recent advances in diagnostic classification and risk stratification

International Nuclear Information System (INIS)

Kansal, Rina

2016-01-01

Acute myeloid leukemia (AML) is a genetically heterogeneous myeloid malignancy that occurs more commonly in adults, and has an increasing incidence, most likely due to increasing age. Precise diagnostic classification of AML requires clinical and pathologic information, the latter including morphologic, immunophenotypic, cytogenetic and molecular genetic analysis. Risk stratification in AML requires cytogenetics evaluation as the most important predictor, with genetic mutations providing additional necessary information. AML with normal cytogenetics comprises about 40%-50% of all AML, and has been intensively investigated. The currently used 2008 World Health Organization classification of hematopoietic neoplasms has been proposed to be updated in 2016, also to include an update on the classification of AML, due to the continuously increasing application of genomic techniques that have led to major advances in our knowledge of the pathogenesis of AML. The purpose of this review is to describe some of these recent major advances in the diagnostic classification and risk stratification of AML

Molecular markers of carcinogenesis for risk stratification of individuals with colorectal polyps: a case-control study.

Science.gov (United States)

Gupta, Samir; Sun, Han; Yi, Sang; Storm, Joy; Xiao, Guanghua; Balasubramanian, Bijal A; Zhang, Song; Ashfaq, Raheela; Rockey, Don C

2014-10-01

Risk stratification using number, size, and histology of colorectal adenomas is currently suboptimal for identifying patients at increased risk for future colorectal cancer. We hypothesized that molecular markers of carcinogenesis in adenomas, measured via immunohistochemistry, may help identify high-risk patients. To test this hypothesis, we conducted a retrospective, 1:1 matched case-control study (n = 216; 46% female) in which cases were patients with colorectal cancer and synchronous adenoma and controls were patients with adenoma but no colorectal cancer at baseline or within 5 years of follow-up. In phase I of analyses, we compared expression of molecular markers of carcinogenesis in case and control adenomas, blind to case status. In phase II of analyses, patients were randomly divided into independent training and validation groups to develop a model for predicting case status. We found that seven markers [p53, p21, Cox-2, β-catenin (BCAT), DNA-dependent protein kinase (DNApkcs), survivin, and O6-methylguanine-DNA methyltransferase (MGMT)] were significantly associated with case status on unadjusted analyses, as well as analyses adjusted for age and advanced adenoma status (P marker component). When applied to the validation set, a predictive model using these seven markers showed substantial accuracy for identifying cases [area under the receiver operation characteristic curve (AUC), 0.83; 95% confidence interval (CI), 0.74-0.92]. A parsimonious model using three markers performed similarly to the seven-marker model (AUC, 0.84). In summary, we found that molecular markers of carcinogenesis distinguished adenomas from patients with and without colorectal cancer. Furthermore, we speculate that prospective studies using molecular markers to identify individuals with polyps at risk for future neoplasia are warranted. ©2014 American Association for Cancer Research.

Experimental investigation of thermal de-stratification in rock bed TES systems for high temperature applications

International Nuclear Information System (INIS)

Okello, Denis; Nydal, Ole J.; Banda, Eldad J.K.

2014-01-01

Highlights: • High thermal stratifications exists rock bed TES when charge with high temperature heat. • Faster thermal degradation occurs in highly stratified bed irrespective of the bed length. • Average rate of heat loss as a function of storage time increases with increasing average bed temperature. - Abstract: Solar energy fluctuates so much that it cannot promote continuous use. Integration of Thermal Energy Storage (TES) with solar energy collection devices has the potential of making solar energy available on demand. Thermal energy can be stored in a bed of rocks at temperatures suitable for applications like cooking, boiling space heating, etc. During charging, temperature stratification is observed in the bed. In a stratified system, if the heat is used immediately, then it is possible to extract heat at reasonably high temperature from the top. For cases where the system is to be used after sometime (later at night or the following morning), the high temperature heat at the top is observed to degrade as the system tries to establish thermal equilibrium irrespective of the bed height. The average rate of heat loss from the TES unit to the ambient is found to increase with increasing average bed temperatures

Principal stratification in causal inference.

Science.gov (United States)

Frangakis, Constantine E; Rubin, Donald B

2002-03-01

Many scientific problems require that treatment comparisons be adjusted for posttreatment variables, but the estimands underlying standard methods are not causal effects. To address this deficiency, we propose a general framework for comparing treatments adjusting for posttreatment variables that yields principal effects based on principal stratification. Principal stratification with respect to a posttreatment variable is a cross-classification of subjects defined by the joint potential values of that posttreatment variable tinder each of the treatments being compared. Principal effects are causal effects within a principal stratum. The key property of principal strata is that they are not affected by treatment assignment and therefore can be used just as any pretreatment covariate. such as age category. As a result, the central property of our principal effects is that they are always causal effects and do not suffer from the complications of standard posttreatment-adjusted estimands. We discuss briefly that such principal causal effects are the link between three recent applications with adjustment for posttreatment variables: (i) treatment noncompliance, (ii) missing outcomes (dropout) following treatment noncompliance. and (iii) censoring by death. We then attack the problem of surrogate or biomarker endpoints, where we show, using principal causal effects, that all current definitions of surrogacy, even when perfectly true, do not generally have the desired interpretation as causal effects of treatment on outcome. We go on to forrmulate estimands based on principal stratification and principal causal effects and show their superiority.

Similarity rules of thermal stratification phenomena for water and sodium

International Nuclear Information System (INIS)

Ohtsuka, M.; Ikeda, T.; Yamakawa, M.; Shibata, Y.; Moriya, S.; Ushijima, S.; Fujimoto, K.

1988-01-01

Similarity rules for thermal stratification phenomena were studied using sodium and water experiments with scaled cylindrical vessels. The vessel dimensions were identical to focus on the effect of differences in fluid properties upon the phenomena. Comparisons of test results between sodium and water elucidated similar and dissimilar characteristics for thermal stratification phenomena which appeared in the scaled vessels. Results were as follows: (1) The dimensionless upward velocity of the thermal stratification interface was proportional to Ri -0.74 for water and sodium during the period when the buoyancy effect was dominant. (2) Dimensionless temperature transient rate at the outlet slit decreased with Ri for sodium and remained constant for water where Ri>0.2. The applicability of the scaled test results to an actual power plant was also studied by using multi-dimensional numerical analysis which was verified by the water and sodium experiments. Water experiments could simulate liquid metal fast breeder reactor flows more accurately than sodium experiments for dimensionless temperature gradient at the thermal stratification interface and dimensionless temperature transient rate at the intermediate heat exchanger inlet

205_WS: Improving the Delivery of Primary Care Through Risk Stratification

DEFF Research Database (Denmark)

Kinder, Karen; Kristensen, Troels; Abrams, Chad

. Content The workshop will open with an introductory presentation on the numerous applications of risk stratification within the integrated and primary care sectors. The workshop will then focus on individual sessions based on three applications: – Case Management. – Improving Coordination...

On the gauge orbit space stratification: a review

International Nuclear Information System (INIS)

Rudolph, G.; Schmidt, M.; Volobuev, I.P.

2002-01-01

First, we review the basic mathematical structures and results concerning the gauge orbit space stratification. This includes general properties of the gauge group action, fibre bundle structures induced by this action, basic properties of the stratification and the natural Riemannian structures of the strata. In the second part, we study the stratification for theories with gauge group SU(n) in spacetime dimension 4. We develop a general method for determining the orbit types and their partial ordering, based on the 1-1 correspondence between orbit types and holonomy-induced Howe subbundles of the underlying principal SU(n)-bundle. We show that the orbit types are classified by certain cohomology elements of spacetime satisfying two relations and that the partial ordering is characterized by a system of algebraic equations. Moreover, operations for generating direct successors and direct predecessors are formulated, which allow one to construct the set of orbit types, starting from the principal type. Finally, we discuss an application to nodal configurations in Yang-Mills-Chern-Simons theory. (author)

On Optimum Stratification

OpenAIRE

M. G. M. Khan; V. D. Prasad; D. K. Rao

2014-01-01

In this manuscript, we discuss the problem of determining the optimum stratification of a study (or main) variable based on the auxiliary variable that follows a uniform distribution. If the stratification of survey variable is made using the auxiliary variable it may lead to substantial gains in precision of the estimates. This problem is formulated as a Nonlinear Programming Problem (NLPP), which turn out to multistage decision problem and is solved using dynamic programming technique.

BAYESIAN BICLUSTERING FOR PATIENT STRATIFICATION.

Science.gov (United States)

Khakabimamaghani, Sahand; Ester, Martin

2016-01-01

The move from Empirical Medicine towards Personalized Medicine has attracted attention to Stratified Medicine (SM). Some methods are provided in the literature for patient stratification, which is the central task of SM, however, there are still significant open issues. First, it is still unclear if integrating different datatypes will help in detecting disease subtypes more accurately, and, if not, which datatype(s) are most useful for this task. Second, it is not clear how we can compare different methods of patient stratification. Third, as most of the proposed stratification methods are deterministic, there is a need for investigating the potential benefits of applying probabilistic methods. To address these issues, we introduce a novel integrative Bayesian biclustering method, called B2PS, for patient stratification and propose methods for evaluating the results. Our experimental results demonstrate the superiority of B2PS over a popular state-of-the-art method and the benefits of Bayesian approaches. Our results agree with the intuition that transcriptomic data forms a better basis for patient stratification than genomic data.

Advancing the education in molecular diagnostics: the IFCC-Initiative "Clinical Molecular Biology Curriculum" (C-CMBC); a ten-year experience.

Science.gov (United States)

Lianidou, Evi; Ahmad-Nejad, Parviz; Ferreira-Gonzalez, Andrea; Izuhara, Kenji; Cremonesi, Laura; Schroeder, Maria-Eugenia; Richter, Karin; Ferrari, Maurizio; Neumaier, Michael

2014-09-25

Molecular techniques are becoming commonplace in the diagnostic laboratory. Their applications influence all major phases of laboratory medicine including predisposition/genetic risk, primary diagnosis, therapy stratification and prognosis. Readily available laboratory hardware and wetware (i.e. consumables and reagents) foster rapid dissemination to countries that are just establishing molecular testing programs. Appropriate skill levels extending beyond the technical procedure are required for analytical and diagnostic proficiency that is mandatory in molecular genetic testing. An international committee (C-CMBC) of the International Federation for Clinical Chemistry (IFCC) was established to disseminate skills in molecular genetic testing in member countries embarking on the respective techniques. We report the ten-year experience with different teaching and workshop formats for beginners in molecular diagnostics. Copyright © 2014 Elsevier B.V. All rights reserved.

Thermal stratification in the pressurizer

International Nuclear Information System (INIS)

Baik, S.J.; Lee, K.W.; Ro, T.S.

2001-01-01

The thermal stratification in the pressurizer due to the insurge from the hot leg to the pressurizer has been studied. The insurge flow of the cold water into the pressurizer takes place during the heatup/cooldown and the normal or abnormal transients during power operation. The pressurizer vessel can undergo significant thermal fatigue usage caused by insurges and outsurges. Two-dimensional axisymmetric transient analysis for the thermal stratification in the pressurizer is performed using the computational fluid dynamics code, FLUENT, to get the velocity and temperature distribution. Parametric study has been carried out to investigate the effect of the inlet velocity and the temperature difference between the hot leg and the pressurizer on the thermal stratification. The results show that the insurge flow of cold water into the pressurizer does not mix well with hot water, and the cold water remains only in the lower portion of the pressurizer, which leads to the thermal stratification in the pressurizer. The thermal load on the pressurizer due to the thermal stratification or the cyclic thermal transient should be examined with respect to the mechanical integrity and this study can serve the design data for the stress analysis. (authors)

Multilayer fabric stratification pipes for solar tanks

DEFF Research Database (Denmark)

Andersen, Elsa; Furbo, Simon; Fan, Jianhua

2007-01-01

The thermal performance of solar heating systems is strongly influenced by the thermal stratification in the heat storage. The higher the degree of thermal stratification is, the higher the thermal performance of the solar heating systems. Thermal stratification in water storages can for instance...

NASA Applications of Molecular Nanotechnology

Science.gov (United States)

Globus, Al; Bailey, David; Han, Jie; Jaffe, Richard; Levit, Creon; Merkle, Ralph; Srivastava, Deepak

1998-01-01

Laboratories throughout the world are rapidly gaining atomically precise control over matter. As this control extends to an ever wider variety of materials, processes and devices, opportunities for applications relevant to NASA's missions will be created. This document surveys a number of future molecular nanotechnology capabilities of aerospace interest. Computer applications, launch vehicle improvements, and active materials appear to be of particular interest. We also list a number of applications for each of NASA's enterprises. If advanced molecular nanotechnology can be developed, almost all of NASA's endeavors will be radically improved. In particular, a sufficiently advanced molecular nanotechnology can arguably bring large scale space colonization within our grasp.

Talent Complementarity and Organizational Stratification

Science.gov (United States)

Abrahamson, Mark

1973-01-01

Stratification within organizations as produced by the distribution of functional importance among positions is investigated. According to Stinchcombe's hypothesis from the functional theory of stratification, the rewards given to various positions are expected to be less equal when talent is complementary rather than additive. Actual differences…

Vertical Stratification Engineering for Organic Bulk-Heterojunction Devices.

Science.gov (United States)

Huang, Liqiang; Wang, Gang; Zhou, Weihua; Fu, Boyi; Cheng, Xiaofang; Zhang, Lifu; Yuan, Zhibo; Xiong, Sixing; Zhang, Lin; Xie, Yuanpeng; Zhang, Andong; Zhang, Youdi; Ma, Wei; Li, Weiwei; Zhou, Yinhua; Reichmanis, Elsa; Chen, Yiwang

2018-05-22

High-efficiency organic solar cells (OSCs) can be produced through optimization of component molecular design, coupled with interfacial engineering and control of active layer morphology. However, vertical stratification of the bulk-heterojunction (BHJ), a spontaneous activity that occurs during the drying process, remains an intricate problem yet to be solved. Routes toward regulating the vertical separation profile and evaluating the effects on the final device should be explored to further enhance the performance of OSCs. Herein, we establish a connection between the material surface energy, absorption, and vertical stratification, which can then be linked to photovoltaic conversion characteristics. Through assessing the performance of temporary, artificial vertically stratified layers created by the sequential casting of the individual components to form a multilayered structure, optimal vertical stratification can be achieved. Adjusting the surface energy offset between the substrate results in donor and acceptor stabilization of that stratified layer. Further, a trade-off between the photocurrent generated in the visible region and the amount of donor or acceptor in close proximity to the electrode was observed. Modification of the substrate surface energy was achieved using self-assembled small molecules (SASM), which, in turn, directly impacted the polymer donor to acceptor ratio at the interface. Using three different donor polymers in conjunction with two alternative acceptors in an inverted organic solar cell architecture, the concentration of polymer donor molecules at the ITO (indium tin oxide)/BHJ interface could be increased relative to the acceptor. Appropriate selection of SASM facilitated a synchronized enhancement in external quantum efficiency and power conversion efficiencies over 10.5%.

Stratification in SNR-300 outlet plenum

International Nuclear Information System (INIS)

Reinders, R.

1983-01-01

In the inner outlet plenum of the SNR-300 under steady state conditions a large toroidal vortex is expected. The main flow passes through the gap between dipplate and shield vessel to the outer annular space. Only 3% of the flow pass the 24 emergency cooling holes, situated in the shield vessel. The sodium leaves the reactor tank through the 3 symmetrically arranged outlet nozzles. For a scram flow rates and temperatures are decreased simultaneously, so it is expected, that stratification occurs in the inner outlet plenum. A measure of stratification effects is the Archimedes Number Ar, which is the relation of buoyancy forces (negative) to kinetic energy. (The Archimedes Number is nearly identical with the Richardson Number). For values Ar>1 stratification can occur. Under the assumption of stratification the code TIRE was developed, which is only applicable for the period of time after some 50 sec after scram. This code serves for long term calculations. As the equations are very simple, it is a very fast code which gives the possibility to calculate transients for some hours real time. This code mainly has to take into account the pressure difference between inner plenum and outlet annulus caused by geodatic pressure. That force is in equilibrium with the pressure drop over the gap and holes in the shield vessel. For more detailed calculations of flow pattern and temperature distribution the code MIX and INKO 2T are applied. MIX was developed and validated at ANL, INKO 2T is a development of INTERATOM. INKO 2T is under validation. Mock up experiments were carried out with water to simulate the transient behavior of the SNR-300 outlet plenum. Calculations obtained by INKO 2T for steady state and the transient are shown for the flow pattern. Results of measurements also prove that stratification begins after about 30 sec. Measurements and detailed calculations show that it is admissible to use the code TIRE for the long term calculations. Calculations for a scram

Effects of Mixture Stratification on Combustion and Emissions of Boosted Controlled Auto-Ignition Engines

Directory of Open Access Journals (Sweden)

Jacek Hunicz

2017-12-01

Full Text Available The stratification of in-cylinder mixtures appears to be an effective method for managing the combustion process in controlled auto-ignition (CAI engines. Stratification can be achieved and controlled using various injection strategies such as split fuel injection and the introduction of a portion of fuel directly before the start of combustion. This study investigates the effect of injection timing and the amount of fuel injected for stratification on the combustion and emissions in CAI engine. The experimental research was performed on a single cylinder engine with direct gasoline injection. CAI combustion was achieved using negative valve overlap and exhaust gas trapping. The experiments were performed at constant engine fueling. Intake boost was applied to control the excess air ratio. The results show that the application of the late injection strategy has a significant effect on the heat release process. In general, the later the injection is and the more fuel is injected for stratification, the earlier the auto-ignition occurs. However, the experimental findings reveal that the effect of stratification on combustion duration is much more complex. Changes in combustion are reflected in NOX emissions. The attainable level of stratification is limited by the excessive emission of unburned hydrocarbons, CO and soot.

Molecular imaging. Fundamentals and applications

International Nuclear Information System (INIS)

Tian, Jie

2013-01-01

Covers a wide range of new theory, new techniques and new applications. Contributed by many experts in China. The editor has obtained the National Science and Technology Progress Award twice. ''Molecular Imaging: Fundamentals and Applications'' is a comprehensive monograph which describes not only the theory of the underlying algorithms and key technologies but also introduces a prototype system and its applications, bringing together theory, technology and applications. By explaining the basic concepts and principles of molecular imaging, imaging techniques, as well as research and applications in detail, the book provides both detailed theoretical background information and technical methods for researchers working in medical imaging and the life sciences. Clinical doctors and graduate students will also benefit from this book.

Fatigue flaw growth assessment and inclusion of stratification to the LBB assessment

Energy Technology Data Exchange (ETDEWEB)

Samohyl, P.

1997-04-01

The application of the LBB requires also fatigue flaw growth assessment. This analysis was performed for PWR nuclear power plants types VVER 440/230, VVER 440/213c, VVER 1000/320. Respecting that these NPP`s were designed according to Russian codes that differ from US codes it was needed to compare these approaches. Comparison with our experimental data was accomplished, too. Margins of applicability of the US methods and their modifications for the materials used for construction of Czech and Slovak NPP`s are shown. Computer code accomplishing the analysis according to described method is presented. Some measurement and calculations show that thermal stratifications in horizontal pipelines can lead to additive loads that are not negligible and can be dangerous. An attempt to include these loads induced by steady-state stratification was made.

Thermal Stratification in Vertical Mantle Tanks

DEFF Research Database (Denmark)

Knudsen, Søren; Furbo, Simon

2001-01-01

It is well known that it is important to have a high degree of thermal stratification in the hot water storage tank to achieve a high thermal performance of SDHW systems. This study is concentrated on thermal stratification in vertical mantle tanks. Experiments based on typical operation conditions...... are carried out to investigate how the thermal stratification is affected by different placements of the mantle inlet. The heat transfer between the solar collector fluid in the mantle and the domestic water in the inner tank is analysed by CFD-simulations. Furthermore, the flow pattern in the vertical mantle...

A Comparative Review of Stratification Texts and Readers

Science.gov (United States)

Peoples, Clayton D.

2012-01-01

Social stratification is a core substantive area within sociology. There are a number of textbooks and readers available on the market that deal with this central topic. In this article, I conduct a comparative review of (a) four stratification textbooks and (b) four stratification readers. (Contains 2 tables.)

Effect of sample stratification on dairy GWAS results

Directory of Open Access Journals (Sweden)

Ma Li

2012-10-01

Full Text Available Abstract Background Artificial insemination and genetic selection are major factors contributing to population stratification in dairy cattle. In this study, we analyzed the effect of sample stratification and the effect of stratification correction on results of a dairy genome-wide association study (GWAS. Three methods for stratification correction were used: the efficient mixed-model association expedited (EMMAX method accounting for correlation among all individuals, a generalized least squares (GLS method based on half-sib intraclass correlation, and a principal component analysis (PCA approach. Results Historical pedigree data revealed that the 1,654 contemporary cows in the GWAS were all related when traced through approximately 10–15 generations of ancestors. Genome and phenotype stratifications had a striking overlap with the half-sib structure. A large elite half-sib family of cows contributed to the detection of favorable alleles that had low frequencies in the general population and high frequencies in the elite cows and contributed to the detection of X chromosome effects. All three methods for stratification correction reduced the number of significant effects. EMMAX method had the most severe reduction in the number of significant effects, and the PCA method using 20 principal components and GLS had similar significance levels. Removal of the elite cows from the analysis without using stratification correction removed many effects that were also removed by the three methods for stratification correction, indicating that stratification correction could have removed some true effects due to the elite cows. SNP effects with good consensus between different methods and effect size distributions from USDA’s Holstein genomic evaluation included the DGAT1-NIBP region of BTA14 for production traits, a SNP 45kb upstream from PIGY on BTA6 and two SNPs in NIBP on BTA14 for protein percentage. However, most of these consensus effects had

Numerical analysis on hydrogen stratification and post-inerting of hydrogen risk

International Nuclear Information System (INIS)

Peng, Cheng; Tong, Lili; Cao, Xuewu

2016-01-01

Highlights: • A three-dimensional computational model was built and the applicability was discussed. • The formation of helium stratification was further studied. • Three influencing factors on the post-inerting of hydrogen risk were analyzed. - Abstract: In the case of severe accidents, the risk of hydrogen explosion threatens the integrity of the nuclear reactor containment. According to nuclear regulations, hydrogen control is required to ensure the safe operation of the nuclear reactor. In this study, the method of Computational Fluid Dynamics (CFD) has been applied to analyze process of hydrogen stratification and the post-inerting of hydrogen risk in the Large-Scale Gas Mixing Facility. A three-dimensional computational model was built and the applicability of different turbulence models was discussed. The result shows that the helium concentration calculated by the standard k–ε turbulence model is closest to the experiment data. Through analyzing the formation of helium stratification at different injection velocities, it is found that when the injection mass flow is constant and the injection velocity of helium increases, the mixture of helium and air is enhanced while there is rarely influence on the formation of helium stratification. In addition, the influences of mass flow rate, injection location and direction and inert gas on the post-inerting of hydrogen risk have been analyzed and the results are as follows: with the increasing of mass flow rate, the mitigation effect of nitrogen on hydrogen risk will be further improved; there is an obvious local difference between the mitigation effects of nitrogen on hydrogen risk in different injection directions and locations; when the inert gas is injected at the same mass flow rate, the mitigation effect of steam on hydrogen risk is better than that of nitrogen. This study can provide technical support for the mitigation of hydrogen risk in the small LWR containment.

Representing Reservoir Stratification in Land Surface and Earth System Models

Science.gov (United States)

Yigzaw, W.; Li, H. Y.; Leung, L. R.; Hejazi, M. I.; Voisin, N.; Payn, R. A.; Demissie, Y.

2017-12-01

A one-dimensional reservoir stratification modeling has been developed as part of Model for Scale Adaptive River Transport (MOSART), which is the river transport model used in the Accelerated Climate Modeling for Energy (ACME) and Community Earth System Model (CESM). Reservoirs play an important role in modulating the dynamic water, energy and biogeochemical cycles in the riverine system through nutrient sequestration and stratification. However, most earth system models include lake models that assume a simplified geometry featuring a constant depth and a constant surface area. As reservoir geometry has important effects on thermal stratification, we developed a new algorithm for deriving generic, stratified area-elevation-storage relationships that are applicable at regional and global scales using data from Global Reservoir and Dam database (GRanD). This new reservoir geometry dataset is then used to support the development of a reservoir stratification module within MOSART. The mixing of layers (energy and mass) in the reservoir is driven by eddy diffusion, vertical advection, and reservoir inflow and outflow. Upstream inflow into a reservoir is treated as an additional source/sink of energy, while downstream outflow represented a sink. Hourly atmospheric forcing from North American Land Assimilation System (NLDAS) Phase II and simulated daily runoff by ACME land component are used as inputs for the model over the contiguous United States for simulations between 2001-2010. The model is validated using selected observed temperature profile data in a number of reservoirs that are subject to various levels of regulation. The reservoir stratification module completes the representation of riverine mass and heat transfer in earth system models, which is a major step towards quantitative understanding of human influences on the terrestrial hydrological, ecological and biogeochemical cycles.

Molecular Imprinting Applications in Forensic Science.

Science.gov (United States)

Yılmaz, Erkut; Garipcan, Bora; Patra, Hirak K; Uzun, Lokman

2017-03-28

Producing molecular imprinting-based materials has received increasing attention due to recognition selectivity, stability, cast effectiveness, and ease of production in various forms for a wide range of applications. The molecular imprinting technique has a variety of applications in the areas of the food industry, environmental monitoring, and medicine for diverse purposes like sample pretreatment, sensing, and separation/purification. A versatile usage, stability and recognition capabilities also make them perfect candidates for use in forensic sciences. Forensic science is a demanding area and there is a growing interest in molecularly imprinted polymers (MIPs) in this field. In this review, recent molecular imprinting applications in the related areas of forensic sciences are discussed while considering the literature of last two decades. Not only direct forensic applications but also studies of possible forensic value were taken into account like illicit drugs, banned sport drugs, effective toxins and chemical warfare agents in a review of over 100 articles. The literature was classified according to targets, material shapes, production strategies, detection method, and instrumentation. We aimed to summarize the current applications of MIPs in forensic science and put forth a projection of their potential uses as promising alternatives for benchmark competitors.

Stratification devices

DEFF Research Database (Denmark)

Andersen, Elsa; Furbo, Simon

2008-01-01

Thermal stratification in the storage tank is extremely important in order to achieve high thermal performance of a solar heating system. High temperatures in the top of the storage tank and low temperatures in the bottom of the storage tank lead to the best operation conditions for any solar hea...

Dynamo Tests for Stratification Below the Core-Mantle Boundary

Science.gov (United States)

Olson, P.; Landeau, M.

2017-12-01

Evidence from seismology, mineral physics, and core dynamics points to a layer with an overall stable stratification in the Earth's outer core, possibly thermal in origin, extending below the core-mantle boundary (CMB) for several hundred kilometers. In contrast, energetic deep mantle convection with elevated heat flux implies locally unstable thermal stratification below the CMB in places, consistent with interpretations of non-dipole geomagnetic field behavior that favor upwelling flows below the CMB. Here, we model the structure of convection and magnetic fields in the core using numerical dynamos with laterally heterogeneous boundary heat flux in order to rationalize this conflicting evidence. Strongly heterogeneous boundary heat flux generates localized convection beneath the CMB that coexists with an overall stable stratification there. Partially stratified dynamos have distinctive time average magnetic field structures. Without stratification or with stratification confined to a thin layer, the octupole component is small and the CMB magnetic field structure includes polar intensity minima. With more extensive stratification, the octupole component is large and the magnetic field structure includes intense patches or high intensity lobes in the polar regions. Comparisons with the time-averaged geomagnetic field are generally favorable for partial stratification in a thin layer but unfavorable for stratification in a thick layer beneath the CMB.

Application of multivariate probabilistic (Bayesian) networks to substance use disorder risk stratification and cost estimation.

Science.gov (United States)

Weinstein, Lawrence; Radano, Todd A; Jack, Timothy; Kalina, Philip; Eberhardt, John S

2009-09-16

This paper explores the use of machine learning and Bayesian classification models to develop broadly applicable risk stratification models to guide disease management of health plan enrollees with substance use disorder (SUD). While the high costs and morbidities associated with SUD are understood by payers, who manage it through utilization review, acute interventions, coverage and cost limitations, and disease management, the literature shows mixed results for these modalities in improving patient outcomes and controlling cost. Our objective is to evaluate the potential of data mining methods to identify novel risk factors for chronic disease and stratification of enrollee utilization, which can be used to develop new methods for targeting disease management services to maximize benefits to both enrollees and payers. For our evaluation, we used DecisionQ machine learning algorithms to build Bayesian network models of a representative sample of data licensed from Thomson-Reuters' MarketScan consisting of 185,322 enrollees with three full-year claim records. Data sets were prepared, and a stepwise learning process was used to train a series of Bayesian belief networks (BBNs). The BBNs were validated using a 10 percent holdout set. The networks were highly predictive, with the risk-stratification BBNs producing area under the curve (AUC) for SUD positive of 0.948 (95 percent confidence interval [CI], 0.944-0.951) and 0.736 (95 percent CI, 0.721-0.752), respectively, and SUD negative of 0.951 (95 percent CI, 0.947-0.954) and 0.738 (95 percent CI, 0.727-0.750), respectively. The cost estimation models produced area under the curve ranging from 0.72 (95 percent CI, 0.708-0.731) to 0.961 (95 percent CI, 0.95-0.971). We were able to successfully model a large, heterogeneous population of commercial enrollees, applying state-of-the-art machine learning technology to develop complex and accurate multivariate models that support near-real-time scoring of novel payer

Principal Stratification in sample selection problems with non normal error terms

DEFF Research Database (Denmark)

Rocci, Roberto; Mellace, Giovanni

The aim of the paper is to relax distributional assumptions on the error terms, often imposed in parametric sample selection models to estimate causal effects, when plausible exclusion restrictions are not available. Within the principal stratification framework, we approximate the true distribut...... an application to the Job Corps training program....

Molecular Imprinting of Macromolecules for Sensor Applications.

Science.gov (United States)

Saylan, Yeşeren; Yilmaz, Fatma; Özgür, Erdoğan; Derazshamshir, Ali; Yavuz, Handan; Denizli, Adil

2017-04-19

Molecular recognition has an important role in numerous living systems. One of the most important molecular recognition methods is molecular imprinting, which allows host compounds to recognize and detect several molecules rapidly, sensitively and selectively. Compared to natural systems, molecular imprinting methods have some important features such as low cost, robustness, high recognition ability and long term durability which allows molecularly imprinted polymers to be used in various biotechnological applications, such as chromatography, drug delivery, nanotechnology, and sensor technology. Sensors are important tools because of their ability to figure out a potentially large number of analytical difficulties in various areas with different macromolecular targets. Proteins, enzymes, nucleic acids, antibodies, viruses and cells are defined as macromolecules that have wide range of functions are very important. Thus, macromolecules detection has gained great attention in concerning the improvement in most of the studies. The applications of macromolecule imprinted sensors will have a spacious exploration according to the low cost, high specificity and stability. In this review, macromolecules for molecularly imprinted sensor applications are structured according to the definition of molecular imprinting methods, developments in macromolecular imprinting methods, macromolecular imprinted sensors, and conclusions and future perspectives. This chapter follows the latter strategies and focuses on the applications of macromolecular imprinted sensors. This allows discussion on how sensor strategy is brought to solve the macromolecules imprinting.

Long time durability tests of fabric inlet stratification pipes

DEFF Research Database (Denmark)

Andersen, Elsa; Furbo, Simon

2008-01-01

and that this destroys the capability of building up thermal stratification for the fabric inlet stratification pipe. The results also show that although dirt, algae etc. are deposited in the fabric pipes in the space heating tank, the capability of the fabric inlet stratifiers to build up thermal stratification...

A reconceptualization of age stratification in China.

Science.gov (United States)

Yin, P; Lai, K H

1983-09-01

Using the concepts of age stratification theory--age effect, cohort effect, and subcohort differences--this paper provides a new perspective on age stratification in China. Currently, the literature suggests that the status of elderly people declined after the Communist Revolution and will further decline with modernization. We discuss the problems with this perspective and argue, instead, that the status of elderly adults did not decline for the majority of the aged during the Maoist years. Rather, the most important change in the age stratification system during the Maoist years was the change in the criterion of age stratification--from age differences to cohort and subcohort differences. Furthermore, the subcohort of elderly adults who suffered the most status decline during the Maoist years--the bourgeoisie--may actually enjoy an increase in status with the recent modernization impetus. Research suggestions from this new perspective are discussed.

Various manifestations of stratification phenomenon during intravenous cholangiography

Energy Technology Data Exchange (ETDEWEB)

Tada, S; Nanjo, M; Kino, M; Sekiya, T; Harada, J; Kuroda, T; Anno, I [Jikei Univ., Tokyo (Japan). School of Medicine

1979-07-01

A classification has been made of various types of stratification phenomenon during intravenous cholangiography. The stage of gallbladder opacification in the recumbent position has been classified as (I) mottled, (II) dendritic, (III) ring-like, and (IV) homogeneous. 'Dendritic' type of stratification phenomenon has never been reported in the literature to our knowledge. At 20 min following infusion of contrast material homogeneous opacification of the gallbladder was noticed in only 14% of patients. The others fell into types I, II or III of stratification phenomenon. In contrast, 87% of the opacified gallbladders were homogeneous on the after fatty meal film. It is therefore mandatory for diagnosis that either a 24 h film or a fatty meal film be taken to avoid the stratification phenomenon.

Various manifestations of stratification phenomenon during intravenous cholangiography

International Nuclear Information System (INIS)

Tada, S.; Nanjo, M.; Kino, M.; Sekiya, T.; Harada, J.; Kuroda, T.; Anno, I.

1979-01-01

A classification has been made of various types of stratification phenomenon during intravenous cholangiography. The stage of gallbladder opacification in the recumbent position has been classified as (I) mottled, (II) dendritic, (III) ring-like, and (IV) homogeneous. 'Dendritic' type of stratification phenomenon has never been reported in the literature to our knowledge. At 20 min following infusion of contrast material homogeneous opacification of the gallbladder was noticed in only 14% of patients. The others fell into types I, II or III of stratification phenomenon. In contrast, 87% of the opacified gallbladders were homogeneous on the after fatty meal film. It is therefore mandatory for diagnosis that either a 24 h film or a fatty meal film be taken to avoid the stratification phenomenon. (author)

Molecular risk stratification of medulloblastoma patients based on immunohistochemical analysis of MYC, LDHB, and CCNB1 expression

NARCIS (Netherlands)

de Haas, Talitha; Hasselt, Nancy; Troost, Dirk; Caron, Huib; Popovic, Mara; Zadravec-Zaletel, Lorna; Grajkowska, Wieslawa; Perek, Marta; Osterheld, Maria-Chiara; Ellison, David; Baas, Frank; Versteeg, Rogier; Kool, Marcel

2008-01-01

PURPOSE: Medulloblastoma is the most common malignant embryonal brain tumor in children. The current clinical risk stratification to select treatment modalities is not optimal because it does not identify the standard-risk patients with resistant disease or the unknown number of high-risk patients

Modeling Multimodal Stratification

DEFF Research Database (Denmark)

Boeriis, Morten

2017-01-01

. The article outlines a theoretical experiment exploring how an alternative way of modeling stratification and instantiation may raise some interesting ideas on the concepts of realization dynamics, system-instance, and the different contexts of the semiotic text. This is elaborated in a discussion of how...

Current Roles and Future Applications of Cardiac CT: Risk Stratification of Coronary Artery Disease

Energy Technology Data Exchange (ETDEWEB)

Yoon, Yeonyee Elizabeth [Department of Cardiology, Cardiovascular Center, Seoul National University Bundang Hospital, Seongnam 463-707 (Korea, Republic of); Lim, Tae-Hwan [Department of Radiology and Research Institute of Radiology, University of Ulsan College of Medicine, Asan Medical Center, Seoul 138-736 (Korea, Republic of)

2014-07-01

Cardiac computed tomography (CT) has emerged as a noninvasive modality for the assessment of coronary artery disease (CAD), and has been rapidly integrated into clinical cares. CT has changed the traditional risk stratification based on clinical risk to image-based identification of patient risk. Cardiac CT, including coronary artery calcium score and coronary CT angiography, can provide prognostic information and is expected to improve risk stratification of CAD. Currently used conventional cardiac CT, provides accurate anatomic information but not functional significance of CAD, and it may not be sufficient to guide treatments such as revascularization. Recently, myocardial CT perfusion imaging, intracoronary luminal attenuation gradient, and CT-derived computed fractional flow reserve were developed to combine anatomical and functional data. Although at present, the diagnostic and prognostic value of these novel technologies needs to be evaluated further, it is expected that all-in-one cardiac CT can guide treatment and improve patient outcomes in the near future.

Optimized endogenous post-stratification in forest inventories

Science.gov (United States)

Paul L. Patterson

2012-01-01

An example of endogenous post-stratification is the use of remote sensing data with a sample of ground data to build a logistic regression model to predict the probability that a plot is forested and using the predicted probabilities to form categories for post-stratification. An optimized endogenous post-stratified estimator of the proportion of forest has been...

Fuel and combustion stratification study of Partially Premixed Combustion

OpenAIRE

Izadi Najafabadi, M.; Dam, N.; Somers, B.; Johansson, B.

2016-01-01

Relatively high levels of stratification is one of the main advantages of Partially Premixed Combustion (PPC) over the Homogeneous Charge Compression Ignition (HCCI) concept. Fuel stratification smoothens heat release and improves controllability of this kind of combustion. However, the lack of a clear definition of “fuel and combustion stratifications” is obvious in literature. Hence, it is difficult to compare stratification levels of different PPC strategies or other combustion concepts. T...

Studies of thermal stratification in water pool

International Nuclear Information System (INIS)

Verma, P.K.; Chandraker, D.K.; Nayak, A.K.; Vijayan, P.K.

2015-01-01

Large water pools are used as a heat sink for various cooling systems used in industry. In context of advance nuclear reactors like AHWR, it is used as ultimate heat sink for passive systems for decay heat removal and containment cooling. This system incorporates heat exchangers submerged in the large water pool. However, heat transfer by natural convection in pool poses a problem of thermal stratification. Due to thermal stratification hot layers of water accumulate over the relatively cold one. The heat transfer performance of heat exchanger gets deteriorated as a hot fluid envelops it. In the nuclear reactors, the walls of the pool are made of concrete and it may subject to high temperature due to thermal stratification which is not desirable. In this paper, a concept of employing shrouds around the heat source is studied. These shrouds provide a bulk flow in the water pool, thereby facilitating mixing of hot and cold fluid, which eliminate stratification. The concept has been applied to the a scaled model of Gravity Driven Water Pool (GDWP) of AHWR in which Isolation Condensers (IC) tubes are submerged for decay heat removal of AHWR using ICS and thermal stratification phenomenon was predicted with and without shrouds. To demonstrate the adequacy of the effectiveness of shroud arrangement and to validate the simulation methodology of RELAP5/Mod3.2, experiments has been conducted on a scaled model of the pool with and without shroud. (author)

Social Stratification in the Workplace in Nigeria

Directory of Open Access Journals (Sweden)

Emmanuel Obukovwo Okaka

2017-06-01

Full Text Available Nigerian society in pre-colonial era was stratified according to royalty, military might, wealth and religious hierarchy as the case may be. But with the advent of paid employment, the social stratification shifted from a traditional format to one outlined with Western societies. The argument put forward is that social class in modern time has only been re-defined, thereby giving Nigeria a unique social stratification with a strong traditional/religious influence. This paper examined the social stratification in Nigeria with the backdrop of the introduction of paid employment and the impact of this unique social classification in the workplace. In examining social stratification in the workplace, four hundred and eighty respondents were interviewed using structured questionnaire in a onetime survey. Data collected indicates that seventy-nine percent of the surveyed group preferred to be classified with traditional or religious strata than academic class. Indicating that, royalty takes the front seat in the stratification of the Nigerian society even in the work place. This scenario may account for the emphasis Nigerians place on traditional and religious titles over academic titles in almost all sphere of life including the workplace. This calls for the strengthening of the traditional and religious institutions so that they can assist to impart core social values on members of the society, while giving proper honour to those who are accomplished professionals in their various fields of endeavours.

Revealing the timing of ocean stratification using remotely sensed ocean fronts

Science.gov (United States)

Miller, Peter I.; Loveday, Benjamin R.

2017-10-01

Stratification is of critical importance to the circulation, mixing and productivity of the ocean, and is expected to be modified by climate change. Stratification is also understood to affect the surface aggregation of pelagic fish and hence the foraging behaviour and distribution of their predators such as seabirds and cetaceans. Hence it would be prudent to monitor the stratification of the global ocean, though this is currently only possible using in situ sampling, profiling buoys or underwater autonomous vehicles. Earth observation (EO) sensors cannot directly detect stratification, but can observe surface features related to the presence of stratification, for example shelf-sea fronts that separate tidally-mixed water from seasonally stratified water. This paper describes a novel algorithm that accumulates evidence for stratification from a sequence of oceanic front maps, and discusses preliminary results in comparison with in situ data and simulations from 3D hydrodynamic models. In certain regions, this method can reveal the timing of the seasonal onset and breakdown of stratification.

Pre-treatment risk stratification of prostate cancer patients: A critical review.

Science.gov (United States)

Rodrigues, George; Warde, Padraig; Pickles, Tom; Crook, Juanita; Brundage, Michael; Souhami, Luis; Lukka, Himu

2012-04-01

The use of accepted prostate cancer risk stratification groups based on prostate-specific antigen, T stage and Gleason score assists in therapeutic treatment decision-making, clinical trial design and outcome reporting. The utility of integrating novel prognostic factors into an updated risk stratification schema is an area of current debate. The purpose of this work is to critically review the available literature on novel pre-treatment prognostic factors and alternative prostate cancer risk stratification schema to assess the feasibility and need for changes to existing risk stratification systems. A systematic literature search was conducted to identify original research publications and review articles on prognostic factors and risk stratification in prostate cancer. Search terms included risk stratification, risk assessment, prostate cancer or neoplasms, and prognostic factors. Abstracted information was assessed to draw conclusions regarding the potential utility of changes to existing risk stratification schema. The critical review identified three specific clinically relevant potential changes to the most commonly used three-group risk stratification system: (1) the creation of a very-low risk category; (2) the splitting of intermediate-risk into a low- and high-intermediate risk groups; and (3) the clarification of the interface between intermediate- and high-risk disease. Novel pathological factors regarding high-grade cancer, subtypes of Gleason score 7 and percentage biopsy cores positive were also identified as potentially important risk-stratification factors. Multiple studies of prognostic factors have been performed to create currently utilized prostate cancer risk stratification systems. We propose potential changes to existing systems.

Investigations on stratification devices for hot water stores

DEFF Research Database (Denmark)

Andersen, Elsa; Furbo, Simon; Hampel, Matthias

2008-01-01

The significance of the thermal stratification for the energy efficiency of small solar-thermal hot water heat stores is pointed out. Exemplary the thermal stratification build-up with devices already marketed as well as with devices still in development has been investigated experimentally...

Architectonics: Design of Molecular Architecture for Functional Applications.

Science.gov (United States)

Avinash, M B; Govindaraju, Thimmaiah

2018-02-20

The term architectonics has its roots in the architectural and philosophical (as early as 1600s) literature that refers to "the theory of structure" and "the structure of theory", respectively. The concept of architectonics has been adapted to advance the field of molecular self-assembly and termed as molecular architectonics. In essence, the methodology of organizing molecular units in the required and controlled configurations to develop advanced functional systems for materials and biological applications comprises the field of molecular architectonics. This concept of designing noncovalent systems enables to focus on different functional aspects of designer molecules for biological and nonbiological applications and also strengthens our efforts toward the mastery over the art of controlled molecular self-assemblies. Programming complex molecular interactions and assemblies for specific functions has been one of the most challenging tasks in the modern era. Meticulously ordered molecular assemblies can impart remarkable developments in several areas spanning energy, health, and environment. For example, the well-defined nano-, micro-, and macroarchitectures of functional molecules with specific molecular ordering possess potential applications in flexible electronics, photovoltaics, photonic crystals, microreactors, sensors, drug delivery, biomedicine, and superhydrophobic coatings, among others. The functional molecular architectures having unparalleled properties are widely evident in various designs of Nature. By drawing inspirations from Nature, intended molecular architectures can be designed and developed to harvest various functions, as there is an inexhaustible resource and scope. In this Account, we present exquisite designer molecules developed by our group and others with an objective to master the art of molecular recognition and self-assembly for functional applications. We demonstrate the tailor-ability of molecular self-assemblies by employing

Dynamic modeling of stratification for chilled water storage tank

International Nuclear Information System (INIS)

Osman, Kahar; Al Khaireed, Syed Muhammad Nasrul; Ariffin, Mohd Kamal; Senawi, Mohd Yusoff

2008-01-01

Air conditioning of buildings can be costly and energy consuming. Application of thermal energy storage (TES) reduces cost and energy consumption. The efficiency of the overall operation is affected by storage tank sizing design, which affects thermal stratification of water during charging and discharging processes in TES system. In this study, numerical simulation is used to determine the relationship between tank size and good thermal stratification. Three dimensional simulations with different tank height-to-diameter ratio (HD) and inlet Reynolds number (Re) are investigated. The effect of the number of diffuser holes is also studied. For shallow tanks (low HD) simulations, no acceptable thermocline thickness can be seen for all Re experimented. Partial mixing is observed throughout the process. Medium HD tanks simulations show good thermocline behavior and clear distinction between warm and cold water can be seen. Finally, deep tanks (high HD) show less acceptable thermocline thickness as compared to that of medium HD tanks. From this study, doubling and halving the number of diffuser holes show no significant effect on the thermocline behavior

A new stratification of mourning dove call-count routes

Science.gov (United States)

Blankenship, L.H.; Humphrey, A.B.; MacDonald, D.

1971-01-01

The mourning dove (Zenaidura macroura) call-count survey is a nationwide audio-census of breeding mourning doves. Recent analyses of the call-count routes have utilized a stratification based upon physiographic regions of the United States. An analysis of 5 years of call-count data, based upon stratification using potential natural vegetation, has demonstrated that this uew stratification results in strata with greater homogeneity than the physiographic strata, provides lower error variance, and hence generates greatet precision in the analysis without an increase in call-count routes. Error variance was reduced approximately 30 percent for the contiguous United States. This indicates that future analysis based upon the new stratification will result in an increased ability to detect significant year-to-year changes.

The role stratification on Indian ocean mixing under global warming

Science.gov (United States)

Praveen, V.; Valsala, V.; Ravindran, A. M.

2017-12-01

The impact of changes in Indian ocean stratification on mixing under global warming is examined. Previous studies on global warming and associated weakening of winds reported to increase the stratification of the world ocean leading to a reduction in mixing, increased acidity, reduced oxygen and there by a reduction in productivity. However this processes is not uniform and are also modulated by changes in wind pattern of the future. Our study evaluate the role of stratification and surface fluxes on mixing focusing northern Indian ocean. A dynamical downscaling study using Regional ocean Modelling system (ROMS) forced with stratification and surface fluxes from selected CMIP5 models are presented. Results from an extensive set of historical and Representative Concentration Pathways 8.5 (rcp8.5) scenario simulations are used to quantify the distinctive role of stratification on mixing.

Patient characteristics and stratification in medical treatment studies for metastatic colorectal cancer: a proposal for standardization of patient characteristic reporting and stratification.

Science.gov (United States)

Sorbye, H; Köhne, C-H; Sargent, D J; Glimelius, B

2007-10-01

Prognostic factors have the potential to determine the survival of patients to a greater extent than current antineoplastic agents. Despite this knowledge, there is no consensus on, first, what patient characteristics to report and, second, what stratification factors to use in metastatic colorectal cancer trials. Seven leading oncology and medical journals were reviewed for phase II and III publications reporting on medical treatment of metastatic colorectal cancer patients during 2001-2005. One hundred and forty-three studies with 21 214 patients were identified. The reporting of patient characteristics and use of stratification was noted. Age, gender, performance status, metastases location, sites and adjuvant chemotherapy were often reported (99-63%). Laboratory values as alkaline phosphatase, lactate dehydrogenase and white blood cell count, repeatedly found to be of prognostic relevance, were rarely reported (5-9%). Stratification was used in all phase III trials; however, only study centre was used with any consistency. There is considerable inconsistency in the reporting of patient characteristics and use of stratification factors in metastatic colorectal cancer trials. We propose a standardization of patient characteristics reporting and stratification factors. A common set of characteristics and strata will aid in trial reporting, interpretation and future meta-analyses.

Nonequilibrium molecular dynamics theory, algorithms and applications

CERN Document Server

Todd, Billy D

2017-01-01

Written by two specialists with over twenty-five years of experience in the field, this valuable text presents a wide range of topics within the growing field of nonequilibrium molecular dynamics (NEMD). It introduces theories which are fundamental to the field - namely, nonequilibrium statistical mechanics and nonequilibrium thermodynamics - and provides state-of-the-art algorithms and advice for designing reliable NEMD code, as well as examining applications for both atomic and molecular fluids. It discusses homogenous and inhomogenous flows and pays considerable attention to highly confined fluids, such as nanofluidics. In addition to statistical mechanics and thermodynamics, the book covers the themes of temperature and thermodynamic fluxes and their computation, the theory and algorithms for homogenous shear and elongational flows, response theory and its applications, heat and mass transport algorithms, applications in molecular rheology, highly confined fluids (nanofluidics), the phenomenon of slip and...

The impact of social stratification on cultural consumption

Directory of Open Access Journals (Sweden)

Tomić Marta

2016-01-01

Full Text Available This paper examines theoretical perspectives, research approaches and research results about the relationship between social stratification and cultural consumption. Paper presents main representatives of three sociological discourses: those who believe that class divisions still exist and that thay had an influence on the social inequalities, especially in the domain of cultural consumption and tastes; authors and researchers who emphasize the impact of social stratification on the formation of cultural stratification, and the third group which consists of those who are advocates of cultural consumptions theories and individualization and cultural tastes which means that membership of a particular social class are not by any cultural influences.

Experimental studies on the thermal stratification and its influence on BLEVEs

Energy Technology Data Exchange (ETDEWEB)

Lin, Wensheng; Gong, Yanwu; Gao, Ting; Gu, Anzhong; Lu, Xuesheng [Institute of Refrigeration and Cryogenics, Shanghai Jiao Tong University, Shanghai 200240 (China)

2010-10-15

The thermal stratification of Liquefied Petroleum Gas (LPG) and its effect on the occurrence of the boiling liquid expanding vapor explosion (BLEVE) have been investigated experimentally. Stratifications in liquid and vapor occur when the LPG tank is heated. The degree of the liquid stratification {beta} increases with an increasing heat flux and decreasing filling ratio. The effect of stratification on the BLEVE has been examined with depressurization tests of LPG. The results show that the pressure recovery for the stratified LPG ({beta} = 1.4) upon sudden depressurization is much lower than that for the isothermal LPG ({beta} = 1). It can be concluded that the liquid stratification decreases the liquid energy and the occurrence of the BLEVE. (author)

Understanding molecular simulation: from algorithms to applications

NARCIS (Netherlands)

Frenkel, D.; Smit, B.

2002-01-01

Second and revised edition Understanding Molecular Simulation: From Algorithms to Applications explains the physics behind the "recipes" of molecular simulation for materials science. Computer simulators are continuously confronted with questions concerning the choice of a particular technique

Awortwi et al.: Mixing and stratification relationship on phytoplankton ...

African Journals Online (AJOL)

Awortwi et al.: Mixing and stratification relationship on phytoplankton of Lake Bosomtwe (Ghana) 43 West African Journal of Applied Ecology, vol. 23(2), 2015: 43–62. The Relationship Between Mixing and Stratification Regime on the Phytoplankton of Lake Bo.

Has climate change disrupted stratification patterns in Lake Victoria ...

African Journals Online (AJOL)

Has climate change disrupted stratification patterns in Lake Victoria, East Africa? ... Climate change may threaten the fisheries of Lake Victoria by increasing density differentials in the water column, thereby strengthening stratification and increasing the ... Keywords: deoxygenation, fisheries, global warming, thermocline

Modelling thermal stratification in the North Sea: Application of a 2-D potential energy model

DEFF Research Database (Denmark)

Nielsen, Morten Holtegaard; St. John, Michael

2001-01-01

is forced with wind, dew point temperature from Ekofisk oilfield in the central North Sea, and tidal current and atmospheric radiation. The model is used to simulate the seasonal cycle of stratification in the central North Sea in the years 1988, 1989 and 1990 and is compared to density profiles...

Thermal stratification and fatigue stress analysis for pressurizer surge line

International Nuclear Information System (INIS)

Yu Xiaofei; Zhang Yixiong

2011-01-01

Thermal stratification of pressurizer surge line induced by the inside fluid results in the global bending moments, local thermal stresses, unexpected displacements and support loadings of the pipe system. In order to avoid a costly three-dimensional computation, a combined 1D/2D technique has been developed and implemented to analyze the thermal stratification and fatigue stress of pressurize surge line of QINSHAN Phase II Extension Nuclear Power Project in this paper, using the computer codes SYSTUS and ROCOCO. According to the mechanical analysis results of stratification, the maximum stress and cumulative usage factor are obtained. The results indicate that the stress and fatigue intensity considering thermal stratification satisfies RCC-M criterion. (authors)

European environmental stratifications and typologies

DEFF Research Database (Denmark)

Hazeu, G.W,; Metzger, M.J.; Mücher, C.A.

2011-01-01

their limitations and challenges. As such, they provide a sound basis for describing the factors affecting the robustness of such datasets. The latter is especially relevant, since there is likely to be further interest in European environmental assessment. In addition, advances in data availability and analysis......A range of new spatial datasets classifying the European environment has been constructed over the last few years. These datasets share the common objective of dividing European environmental gradients into convenient units, within which objects and variables of interest have relatively homogeneous...... scale. This paper provides an overview of five recent European stratifications and typologies, constructed for contrasting objectives, and differing in spatial and thematic detail. These datasets are: the Environmental Stratification (EnS), the European Landscape Classification (LANMAP), the Spatial...

Understanding molecular simulation from algorithms to applications

CERN Document Server

Frenkel, Daan

2001-01-01

Understanding Molecular Simulation: From Algorithms to Applications explains the physics behind the ""recipes"" of molecular simulation for materials science. Computer simulators are continuously confronted with questions concerning the choice of a particular technique for a given application. A wide variety of tools exist, so the choice of technique requires a good understanding of the basic principles. More importantly, such understanding may greatly improve the efficiency of a simulation program. The implementation of simulation methods is illustrated in pseudocodes and their practic

Fuel and combustion stratification study of Partially Premixed Combustion

NARCIS (Netherlands)

Izadi Najafabadi, M.; Dam, N.; Somers, B.; Johansson, B.

2016-01-01

Relatively high levels of stratification is one of the main advantages of Partially Premixed Combustion (PPC) over the Homogeneous Charge Compression Ignition (HCCI) concept. Fuel stratification smoothens heat release and improves controllability of this kind of combustion. However, the lack of a

Nonlinear waves in waveguides with stratification

CERN Document Server

Leble, Sergei B

1991-01-01

S.B. Leble's book deals with nonlinear waves and their propagation in metallic and dielectric waveguides and media with stratification. The underlying nonlinear evolution equations (NEEs) are derived giving also their solutions for specific situations. The reader will find new elements to the traditional approach. Various dispersion and relaxation laws for different guides are considered as well as the explicit form of projection operators, NEEs, quasi-solitons and of Darboux transforms. Special points relate to: 1. the development of a universal asymptotic method of deriving NEEs for guide propagation; 2. applications to the cases of stratified liquids, gases, solids and plasmas with various nonlinearities and dispersion laws; 3. connections between the basic problem and soliton- like solutions of the corresponding NEEs; 4. discussion of details of simple solutions in higher- order nonsingular perturbation theory.

Black molecular adsorber coatings for spaceflight applications

Science.gov (United States)

Abraham, Nithin S.; Hasegawa, Mark M.; Straka, Sharon A.

2014-09-01

The molecular adsorber coating is a new technology that was developed to mitigate the risk of on-orbit molecular contamination on spaceflight missions. The application of this coating would be ideal near highly sensitive, interior surfaces and instruments that are negatively impacted by outgassed molecules from materials, such as plastics, adhesives, lubricants, epoxies, and other similar compounds. This current, sprayable paint technology is comprised of inorganic white materials made from highly porous zeolite. In addition to good adhesion performance, thermal stability, and adsorptive capability, the molecular adsorber coating offers favorable thermal control characteristics. However, low reflectivity properties, which are typically offered by black thermal control coatings, are desired for some spaceflight applications. For example, black coatings are used on interior surfaces, in particular, on instrument baffles for optical stray light control. Similarly, they are also used within light paths between optical systems, such as telescopes, to absorb light. Recent efforts have been made to transform the white molecular adsorber coating into a black coating with similar adsorptive properties. This result is achieved by optimizing the current formulation with black pigments, while still maintaining its adsorption capability for outgassing control. Different binder to pigment ratios, coating thicknesses, and spray application techniques were explored to develop a black version of the molecular adsorber coating. During the development process, coating performance and adsorption characteristics were studied. The preliminary work performed on black molecular adsorber coatings thus far is very promising. Continued development and testing is necessary for its use on future contamination sensitive spaceflight missions.

Relationship between thermal stratification and flow patterns in steam-quenching suppression pool

International Nuclear Information System (INIS)

Song, Daehun; Erkan, Nejdet; Jo, Byeongnam; Okamoto, Koji

2015-01-01

Highlights: • Thermal stratification mechanism by direct contact condensation is investigated. • Thermal stratification condition changes according to the flow pattern. • Thermal stratification depends on the force balance between buoyancy and momentum. • Flow pattern change was observed even in the same regime. • Flow pattern is affected by the sensitive force balance. - Abstract: This study aims to examine the relationship between thermal stratification and flow patterns in a steam-quenching suppression pool using particle image velocimetry. Thermal stratification was experimentally evaluated in a depressurized water pool under different steam mass flux conditions. The time evolution of the temperature profile of the suppression pool was presented with the variation of condensation regimes, and steam condensation processes were visualized using a high-speed camera. The thermal stratification condition was classified into full mixing, gradual thermal stratification, and developed thermal stratification. It was found that the condition was determined by the flow patterns depending on the force balance between buoyancy and momentum. The force balance affected both the condensation regime and the flow pattern, and hence, the flow pattern was changed with the condensation regime. However, the force balance had a sensitive influence on the flow in the pool; therefore, distinct flow patterns were observed even in the same condensation regime.

Molecular Pathogenesis and Diagnostic, Prognostic and Predictive Molecular Markers in Sarcoma.

Science.gov (United States)

Mariño-Enríquez, Adrián; Bovée, Judith V M G

2016-09-01

Sarcomas are infrequent mesenchymal neoplasms characterized by notable morphological and molecular heterogeneity. Molecular studies in sarcoma provide refinements to morphologic classification, and contribute diagnostic information (frequently), prognostic stratification (rarely) and predict therapeutic response (occasionally). Herein, we summarize the major molecular mechanisms underlying sarcoma pathogenesis and present clinically useful diagnostic, prognostic and predictive molecular markers for sarcoma. Five major molecular alterations are discussed, illustrated with representative sarcoma types, including 1. the presence of chimeric transcription factors, in vascular tumors; 2. abnormal kinase signaling, in gastrointestinal stromal tumor; 3. epigenetic deregulation, in chondrosarcoma, chondroblastoma, and other tumors; 4. deregulated cell survival and proliferation, due to focal copy number alterations, in dedifferentiated liposarcoma; 5. extreme genomic instability, in conventional osteosarcoma as a representative example of sarcomas with highly complex karyotype. Copyright © 2016 Elsevier Inc. All rights reserved.

Polar ocean stratification in a cold climate.

Science.gov (United States)

Sigman, Daniel M; Jaccard, Samuel L; Haug, Gerald H

2004-03-04

The low-latitude ocean is strongly stratified by the warmth of its surface water. As a result, the great volume of the deep ocean has easiest access to the atmosphere through the polar surface ocean. In the modern polar ocean during the winter, the vertical distribution of temperature promotes overturning, with colder water over warmer, while the salinity distribution typically promotes stratification, with fresher water over saltier. However, the sensitivity of seawater density to temperature is reduced as temperature approaches the freezing point, with potential consequences for global ocean circulation under cold climates. Here we present deep-sea records of biogenic opal accumulation and sedimentary nitrogen isotopic composition from the Subarctic North Pacific Ocean and the Southern Ocean. These records indicate that vertical stratification increased in both northern and southern high latitudes 2.7 million years ago, when Northern Hemisphere glaciation intensified in association with global cooling during the late Pliocene epoch. We propose that the cooling caused this increased stratification by weakening the role of temperature in polar ocean density structure so as to reduce its opposition to the stratifying effect of the vertical salinity distribution. The shift towards stratification in the polar ocean 2.7 million years ago may have increased the quantity of carbon dioxide trapped in the abyss, amplifying the global cooling.

Breakup of last glacial deep stratification in the South Pacific

Science.gov (United States)

Basak, Chandranath; Fröllje, Henning; Lamy, Frank; Gersonde, Rainer; Benz, Verena; Anderson, Robert F.; Molina-Kescher, Mario; Pahnke, Katharina

2018-02-01

Stratification of the deep Southern Ocean during the Last Glacial Maximum is thought to have facilitated carbon storage and subsequent release during the deglaciation as stratification broke down, contributing to atmospheric CO2 rise. Here, we present neodymium isotope evidence from deep to abyssal waters in the South Pacific that confirms stratification of the deepwater column during the Last Glacial Maximum. The results indicate a glacial northward expansion of Ross Sea Bottom Water and a Southern Hemisphere climate trigger for the deglacial breakup of deep stratification. It highlights the important role of abyssal waters in sustaining a deep glacial carbon reservoir and Southern Hemisphere climate change as a prerequisite for the destabilization of the water column and hence the deglacial release of sequestered CO2 through upwelling.

GOTHIC code simulation of thermal stratification in POOLEX facility

International Nuclear Information System (INIS)

Li, H.; Kudinov, P.

2009-07-01

Pressure suppression pool is an important element of BWR containment. It serves as a heat sink and steam condenser to prevent containment pressure buildup during loss of coolant accident or safety relief valve opening during normal operations of a BWR. Insufficient mixing in the pool, in case of low mass flow rate of steam, can cause development of thermal stratification and reduction of pressure suppression pool capacity. For reliable prediction of mixing and stratification phenomena validation of simulation tools has to be performed. Data produced in POOLEX/PPOOLEX facility at Lappeenranta University of Technology about development of thermal stratification in a large scale model of a pressure suppression pool is used for GOTHIC lumped and distributed parameter validation. Sensitivity of GOTHIC solution to different boundary conditions and grid convergence study for 2D simulations of POOLEX STB-20 experiment are performed in the present study. CFD simulation was carried out with FLUENT code in order to get additional insights into physics of stratification phenomena. In order to support development of experimental procedures for new tests in the PPOOLEX facility lumped parameter pre-test GOTHIC simulations were performed. Simulations show that drywell and wetwell pressures can be kept within safety margins during a long transient necessary for development of thermal stratification. (au)

GOTHIC code simulation of thermal stratification in POOLEX facility

Energy Technology Data Exchange (ETDEWEB)

Li, H.; Kudinov, P. (Royal Institute of Technology (KTH) (Sweden))

2009-07-15

Pressure suppression pool is an important element of BWR containment. It serves as a heat sink and steam condenser to prevent containment pressure buildup during loss of coolant accident or safety relief valve opening during normal operations of a BWR. Insufficient mixing in the pool, in case of low mass flow rate of steam, can cause development of thermal stratification and reduction of pressure suppression pool capacity. For reliable prediction of mixing and stratification phenomena validation of simulation tools has to be performed. Data produced in POOLEX/PPOOLEX facility at Lappeenranta University of Technology about development of thermal stratification in a large scale model of a pressure suppression pool is used for GOTHIC lumped and distributed parameter validation. Sensitivity of GOTHIC solution to different boundary conditions and grid convergence study for 2D simulations of POOLEX STB-20 experiment are performed in the present study. CFD simulation was carried out with FLUENT code in order to get additional insights into physics of stratification phenomena. In order to support development of experimental procedures for new tests in the PPOOLEX facility lumped parameter pre-test GOTHIC simulations were performed. Simulations show that drywell and wetwell pressures can be kept within safety margins during a long transient necessary for development of thermal stratification. (au)

Molecular trees: from syntheses towards applications

International Nuclear Information System (INIS)

Ardoin, N.; Astruc, D.

1995-01-01

Molecular trees, also called dendrimers, arborols, cauliflowers, cascades or hyperbranched molecules, have been synthesized since their first observation in 1978 by divergent, convergent or combined methods, with various functions on the branches. The potential applications of these nanoscopic molecules are in the fields of biology (gene therapy, virus mimicking an vectorization) and molecular materials sciences (new polymers, adhesion, liquid crystals, etc). (authors). 236 refs., 6 figs., 2 tabs., 8 schemes

Effect of layout on surge line thermal stratification

International Nuclear Information System (INIS)

Lai Jianyong; Huang Wei

2011-01-01

In order to analyze and evaluate the effect of layout on the thermal stratification for PWR Pressurizer surge line, numerical simulation by Computational Fluid Dynamics (CFD) method is taken on 6 kinds of layout improvement with 2 improvement schemes, i.e., increasing the obliquity of quasi horizontal section and adding a vertical pipe between the quasi horizontal section and next elbow, and the maximum temperature differences of quasi horizontal section of surge line of various layouts under different flowrate are obtained. The comparison shows that, the increasing of the obliquity of quasi horizontal section can mitigate the thermal stratification phenomena but can not eliminate this phenomena, while the adding of a vertical pipe between the quasi horizontal section and next elbow can effectively mitigate and eliminate the thermal stratification phenomena. (authors)

Horizontal Stratification in Access to Danish University Programmes

DEFF Research Database (Denmark)

Munk, Martin D.; Thomsen, Jens Peter

2018-01-01

a relatively detailed classification of parents’ occupations to determine how students are endowed with different forms of capital, even when their parents would typically be characterised as belonging to the same social group. Second, we distinguish among disciplines and among university institutions...... to explain the dynamics of horizontal stratification in the Danish university system. Using unique and exhaustive register data, including all higher education institutions and the entire 1984 cohort as of the age of 24, we uncover distinct differences in the magnitude and type of horizontal stratification...... in different fields of study and university institutions. Most importantly, we find distinct patterns of horizontal stratification by field of study and parental occupation that would have remained hidden had we used more aggregated classifications for field of study and social origin....

Molecular biology applications to infectious diseases diagnostic

International Nuclear Information System (INIS)

2001-01-01

This project goes directed to the applications of the techniques of molecular biology in hepatitis virus.A great advance of these techniques it allows its application to the diagnose molecular and it becomes indispensable to have these fundamental tools in the field of the Health Public for the detection precocious, pursuit of the treatment, the one predicts and the evolution of the patient hepatitis bearing virus technical.Use of molecular biology to increase the handling and the control of the patients with hepatitis B and C and to detect an adult numbers of positive cases by means of the training and integration of all the countries participating.Implement the technique of PCR to identify the virus of the hepatitis B and C,implement quantification methods and genotipification for these virus

Application of support vector machine classifiers to preoperative risk stratification with myocardial perfusion scintigraphy

International Nuclear Information System (INIS)

Kasamatsu, Tomotaka; Hashimoto, Jun; Nakahara, Tadaki; Bai, Jingming; Kitamura, Naoto; Kubo, Atsushi; Iyatomi, Hitoshi; Ogawa, Koichi

2008-01-01

Myocardial perfusion single-photon emission computed tomography (SPECT) has been used for risk stratification before non-cardiac surgery. However, few authors have used mathematical models for evaluating the likelihood of perioperative cardiac events. This retrospective cohort study collected data of 1,351 patients referred for SPECT before non-cardiac surgery. We generated binary classifiers using support vector machine (SVM) and conventional linear models for predicting perioperative cardiac events. We used clinical and surgical risk, and SPECT findings as input data, and the occurrence of all and hard cardiac events as output data. The area under the receiver-operating characteristic curve (AUC) was calculated for assessing the prediction accuracy. The AUC values were 0.884 and 0.748 in the SVM and linear models, respectively in predicting all cardiac events with clinical and surgical risk, and SPECT variables. The values were 0.861 (SVM) and 0.677 (linear) when not using SPECT data as input. In hard events, the AUC values were 0.892 (SVM) and 0.864 (linear) with SPECT, and 0.867 (SVM) and 0.768 (linear) without SPECT. The SVM was superior to the linear model in risk stratification. We also found an incremental prognostic value of SPECT results over information about clinical and surgical risk. (author)

A probabilistic topic model for clinical risk stratification from electronic health records.

Science.gov (United States)

Huang, Zhengxing; Dong, Wei; Duan, Huilong

2015-12-01

Risk stratification aims to provide physicians with the accurate assessment of a patient's clinical risk such that an individualized prevention or management strategy can be developed and delivered. Existing risk stratification techniques mainly focus on predicting the overall risk of an individual patient in a supervised manner, and, at the cohort level, often offer little insight beyond a flat score-based segmentation from the labeled clinical dataset. To this end, in this paper, we propose a new approach for risk stratification by exploring a large volume of electronic health records (EHRs) in an unsupervised fashion. Along this line, this paper proposes a novel probabilistic topic modeling framework called probabilistic risk stratification model (PRSM) based on Latent Dirichlet Allocation (LDA). The proposed PRSM recognizes a patient clinical state as a probabilistic combination of latent sub-profiles, and generates sub-profile-specific risk tiers of patients from their EHRs in a fully unsupervised fashion. The achieved stratification results can be easily recognized as high-, medium- and low-risk, respectively. In addition, we present an extension of PRSM, called weakly supervised PRSM (WS-PRSM) by incorporating minimum prior information into the model, in order to improve the risk stratification accuracy, and to make our models highly portable to risk stratification tasks of various diseases. We verify the effectiveness of the proposed approach on a clinical dataset containing 3463 coronary heart disease (CHD) patient instances. Both PRSM and WS-PRSM were compared with two established supervised risk stratification algorithms, i.e., logistic regression and support vector machine, and showed the effectiveness of our models in risk stratification of CHD in terms of the Area Under the receiver operating characteristic Curve (AUC) analysis. As well, in comparison with PRSM, WS-PRSM has over 2% performance gain, on the experimental dataset, demonstrating that

Stratification for smoking in case-cohort studies of genetic polymorphisms and lung cancer

DEFF Research Database (Denmark)

Sørensen, Mette; López, Ana García; Andersen, Per Kragh

2009-01-01

and adjustment for smoking on the estimated effect of polymorphisms on lung cancer risk was explored in the case-cohort design. We used an empirical and a statistical simulation approach. The stratification strategies were: no smoking stratification, stratification for smoking status and stratification......The risk estimates obtained in studies of genetic polymorphisms and lung cancer differ markedly between studies, which might be due to chance or differences in study design, in particular the stratification/match of comparison group. The effect of different strategies for stratification...... for smoking duration. The study base was a prospective follow-up study with 57,053 participants. In the simulation approach the glutathione S-transferase T1 null polymorphism, as a model of any polymorphism, was added to simulated data in two different ways, assuming either absence or presence of association...

Predictions of stratification in cold leg components using virtual noding schemes

International Nuclear Information System (INIS)

Piper, R.B.; Hassan, Y.A.; Banerjee, S.S.; Barsamian, H.R.; Cebull, P.P.

1996-01-01

In this investigation, a virtual noding scheme is used with RELAP5/MOD3.2 to capture thermal stratification effects in a small-break loss-of-coolant accident (LOCA) simulation. A three-dimensional code (CFD-ACE) has also been used to observe the stratification effects in a similar situation. Stratification temperature differences of the simulations compare well with that of the experiment. The Froude number was also evaluated

Transparency of Reporting in Molecular Diagnostics

Directory of Open Access Journals (Sweden)

Stephen Bustin

2013-07-01

Full Text Available The major advances made over the past few years in molecular and cell biology are providing a progressively more detailed understanding of the molecular pathways that control normal processes and become dysregulated in disease [1]. This has resulted in the documentation of numerous genetic, epigenetic, transcriptomic, proteomic and metabolomic biomarkers that promise earlier disease detection, more accurate patient stratification and better prognosis [2–5]. Furthermore, molecular fingerprinting of diseases can be predictive of drug response and so assist with specific targeting of drugs against disease-associated molecules and function [6]. [...

Combustion Stratification for Naphtha from CI Combustion to PPC

KAUST Repository

Vallinayagam, R.

2017-03-28

This study demonstrates the combustion stratification from conventional compression ignition (CI) combustion to partially premixed combustion (PPC). Experiments are performed in an optical CI engine at a speed of 1200 rpm for diesel and naphtha (RON = 46). The motored pressure at TDC is maintained at 35 bar and fuelMEP is kept constant at 5.1 bar to account for the difference in fuel properties between naphtha and diesel. Single injection strategy is employed and the fuel is injected at a pressure of 800 bar. Photron FASTCAM SA4 that captures in-cylinder combustion at the rate of 10000 frames per second is employed. The captured high speed video is processed to study the combustion homogeneity based on an algorithm reported in previous studies. Starting from late fuel injection timings, combustion stratification is investigated by advancing the fuel injection timings. For late start of injection (SOI), a direct link between SOI and combustion phasing is noticed. At early SOI, combustion phasing depends on both intake air temperature and SOI. In order to match the combustion phasing (CA50) of diesel, the intake air temperature is increased to 90°C for naphtha. The combustion stratification from CI to PPC is also investigated for various level of dilution by displacing oxygen with nitrogen in the intake. The start of combustion (SOC) was delayed with the increase in dilution and to compensate for this, the intake air temperature is increased. The mixture homogeneity is enhanced for higher dilution due to longer ignition delay. The results show that high speed image is initially blue and then turned yellow, indicating soot formation and oxidation. The luminosity of combustion images decreases with early SOI and increased dilution. The images are processed to generate the level of stratification based on the image intensity. The level of stratification is same for diesel and naphtha at various SOI. When O concentration in the intake is decreased to 17.7% and 14

Numerical analysis of unsteady conjugate heat transfer for initial evolution of thermal stratification in a curved pipe

International Nuclear Information System (INIS)

Jo, Jong Chull; Kim, Wee Kyung; Kim, Yun Il; Cho, Sang Jin; Choi, Seok Ki

2000-01-01

A detailed numerical analysis of initial evolution of thermal stratification in a curved pipe with a finite wall thickness is performed. A primary emphasis of the present study is placed on the investigation of the effect of existence of pipe wall thickness on the evolution of thermal stratification. A simple and convenient numerical method of treating the unsteady conjugate heat transfer in Cartesian as well as non-orthogonal coordinate systems is presented. The proposed unsteady conjugate heat transfer analysis method is implemented in a finite volume thermal-hydraulic computer code based on a cell-centered, non-staggered grid arrangement, the SIMPLEC algorithm and a higher-order bounded convection scheme. Calculations are performed for initial evolution of thermal stratification with high Richardson number in a curved pipe. The predicted results show that the thermally stratified flow and transient conjugate heat transfer in a curved pipe with a specified wall thickness can be satisfactorily analyzed by using the numerical method presented in this paper. As the result, the present analysis method is considered to be effective for the determination of transient temperature distributions in the wall of curved piping system subjected to internally thermal stratification. In addition, the method can be extended to be applicable for the simulation of turbulent flow of thermally stratified fluid

Temperature Stratification in a Cryogenic Fuel Tank

Science.gov (United States)

Daigle, Matthew John; Smelyanskiy, Vadim; Boschee, Jacob; Foygel, Michael Gregory

2013-01-01

A reduced dynamical model describing temperature stratification effects driven by natural convection in a liquid hydrogen cryogenic fuel tank has been developed. It accounts for cryogenic propellant loading, storage, and unloading in the conditions of normal, increased, and micro- gravity. The model involves multiple horizontal control volumes in both liquid and ullage spaces. Temperature and velocity boundary layers at the tank walls are taken into account by using correlation relations. Heat exchange involving the tank wall is considered by means of the lumped-parameter method. By employing basic conservation laws, the model takes into consideration the major multi-phase mass and energy exchange processes involved, such as condensation-evaporation of the hydrogen, as well as flows of hydrogen liquid and vapor in the presence of pressurizing helium gas. The model involves a liquid hydrogen feed line and a tank ullage vent valve for pressure control. The temperature stratification effects are investigated, including in the presence of vent valve oscillations. A simulation of temperature stratification effects in a generic cryogenic tank has been implemented in Matlab and results are presented for various tank conditions.

Germination and development of pecan cultivar seedlings by seed stratification

Directory of Open Access Journals (Sweden)

Igor Poletto

2015-12-01

Full Text Available Abstract: The objective of this work was to evaluate the effect of seed stratification on germination rate, germination speed, and initial development of seedlings of six pecan (Carya illinoinensis cultivars under subtropical climatic conditions in southern Brazil. For stratification, the seeds were placed in boxes with moist sand, in a cold chamber at 4°C, for 90 days. In the fourteenth week after sowing, the emergence speed index, total emergence, plant height, stem diameter, and number of leaves were evaluated. Seed stratification significantly improves the germination potential and morphological traits of the evaluated cultivars.

Eddy-driven stratification initiates North Atlantic spring phytoplankton blooms.

Science.gov (United States)

Mahadevan, Amala; D'Asaro, Eric; Lee, Craig; Perry, Mary Jane

2012-07-06

Springtime phytoplankton blooms photosynthetically fix carbon and export it from the surface ocean at globally important rates. These blooms are triggered by increased light exposure of the phytoplankton due to both seasonal light increase and the development of a near-surface vertical density gradient (stratification) that inhibits vertical mixing of the phytoplankton. Classically and in current climate models, that stratification is ascribed to a springtime warming of the sea surface. Here, using observations from the subpolar North Atlantic and a three-dimensional biophysical model, we show that the initial stratification and resulting bloom are instead caused by eddy-driven slumping of the basin-scale north-south density gradient, resulting in a patchy bloom beginning 20 to 30 days earlier than would occur by warming.

Near-Surface Effects of Free Atmosphere Stratification in Free Convection

NARCIS (Netherlands)

Mellado, Juan Pedro; Heerwaarden, van C.C.; Garcia, Jade Rachele

2016-01-01

The effect of a linear stratification in the free atmosphere on near-surface properties in a free convective boundary layer (CBL) is investigated by means of direct numerical simulation. We consider two regimes: a neutral stratification regime, which represents a CBL that grows into a residual

Ventricular repolarization measures for arrhythmic risk stratification

Institute of Scientific and Technical Information of China (English)

Francesco Monitillo; Marta Leone; Caterina Rizzo; Andrea Passantino; Massimo Iacoviello

2016-01-01

Ventricular repolarization is a complex electrical phenomenon which represents a crucial stage in electrical cardiac activity. It is expressed on the surface electrocardiogram by the interval between the start of the QRS complex and the end of the T wave or U wave(QT). Several physiological, pathological and iatrogenic factors can influence ventricular repolarization. It has been demonstrated that small perturbations in this process can be a potential trigger of malignant arrhythmias, therefore the analysis of ventricular repolarization represents an interesting tool to implement risk stratification of arrhythmic events in different clinical settings. The aim of this review is to critically revise the traditional methods of static analysis of ventricular repolarization as well as those for dynamic evaluation, their prognostic significance and the possible application in daily clinical practice.

Molecular bioinformatics: algorithms and applications

National Research Council Canada - National Science Library

Schulze-Kremer, S

1996-01-01

... on molecular biology, especially D N A sequence analysis and protein structure prediction. These two issues are also central to this book. Other application areas covered here are: interpretation of spectroscopic data and discovery of structure-function relationships in D N A and proteins. Figure 1 depicts the interdependence of computer science,...

Asymptomatic internal carotid artery stenosis and cerebrovascular risk stratification

DEFF Research Database (Denmark)

Nicolaides, Andrew N; Kakkos, Stavros K; Kyriacou, Efthyvoulos

2010-01-01

The purpose of this study was to determine the cerebrovascular risk stratification potential of baseline degree of stenosis, clinical features, and ultrasonic plaque characteristics in patients with asymptomatic internal carotid artery (ICA) stenosis.......The purpose of this study was to determine the cerebrovascular risk stratification potential of baseline degree of stenosis, clinical features, and ultrasonic plaque characteristics in patients with asymptomatic internal carotid artery (ICA) stenosis....

The Effect of Barotropic and Baroclinic Tides on Coastal Stratification and Mixing

Science.gov (United States)

Suanda, S. H.; Feddersen, F.; Kumar, N.

2017-12-01

The effects of barotropic and baroclinic tides on subtidal stratification and vertical mixing are examined with high-resolution, three-dimensional numerical simulations of the Central Californian coastal upwelling region. A base simulation with realistic atmospheric and regional-scale boundary forcing but no tides (NT) is compared to two simulations with the addition of predominantly barotropic local tides (LT) and with combined barotropic and remotely generated, baroclinic tides (WT) with ≈ 100 W m-1 onshore baroclinic energy flux. During a 10 day period of coastal upwelling when the domain volume-averaged temperature is similar in all three simulations, LT has little difference in subtidal temperature and stratification compared to NT. In contrast, the addition of remote baroclinic tides (WT) reduces the subtidal continental shelf stratification up to 50% relative to NT. Idealized simulations to isolate barotropic and baroclinic effects demonstrate that within a parameter space of typical U.S. West Coast continental shelf slopes, barotropic tidal currents, incident energy flux, and subtidal stratification, the dissipating baroclinic tide destroys stratification an order of magnitude faster than barotropic tides. In WT, the modeled vertical temperature diffusivity at the top (base) of the bottom (surface) boundary layer is increased up to 20 times relative to NT. Therefore, the width of the inner-shelf (region of surface and bottom boundary layer overlap) is increased approximately 4 times relative to NT. The change in stratification due to dissipating baroclinic tides is comparable to the magnitude of the observed seasonal cycle of stratification.

Revealing the timing of ocean stratification using remotely-sensed ocean fronts: links with marine predators

Science.gov (United States)

Miller, P. I.; Loveday, B. R.

2016-02-01

Stratification is of critical importance to the mixing and productivity of the ocean, though currently it can only be measured using in situ sampling, profiling buoys or underwater autonomous vehicles. Stratification is understood to affect the surface aggregation of pelagic fish and hence the foraging behaviour and distribution of their predators such as seabirds and cetaceans. Satellite Earth observation sensors cannot directly detect stratification, but can observe surface features related to the presence of stratification, for example shelf-sea fronts that separate tidally-mixed water from seasonally stratified water. This presentation describes a novel algorithm that accumulates evidence for stratification from a sequence of oceanic front maps, and in certain regions can reveal the timing of the seasonal onset and breakdown of stratification. Initial comparisons will be made with seabird locations acquired through GPS tagging. If successful, a remotely-sensed stratification timing index would augment the ocean front metrics already developed at PML, that have been applied in over 20 journal articles relating marine predators to ocean fronts. The figure below shows a preliminary remotely-sensed 'stratification' index, for 25-31 Jul. 2010, where red indicates water with stronger evidence for stratification.

PPOOLEX experiments on thermal stratification and mixing

Energy Technology Data Exchange (ETDEWEB)

Puustinen, M.; Laine, J.; Raesaenen, A. (Lappeenranta Univ. of Technology, Nuclear Safety Research Unit (Finland))

2009-08-15

The results of the thermal stratification experiments in 2008 with the PPOOLEX test facility are presented. PPOOLEX is a closed vessel divided into two compartments, dry well and wet well. Extra temperature measurements for capturing different aspects of the investigated phenomena were added before the experiments. The main purpose of the experiment series was to generate verification data for evaluating the capability of GOTHIC code to predict stratification and mixing phenomena. Altogether six experiments were carried out. Heat-up periods of several thousand seconds by steam injection into the dry well compartment and from there into the wet well water pool were recorded. The initial water bulk temperature was 20 deg. C. Cooling periods of several days were included in three experiments. A large difference between the pool bottom and top layer temperature was measured when small steam flow rates were used. With higher flow rates the mixing effect of steam discharge delayed the start of stratification until the pool bulk temperature exceeded 50 deg. C. The stratification process was also different in these two cases. With a small flow rate stratification was observed only above and just below the blowdown pipe outlet elevation. With a higher flow rate over a 30 deg. C temperature difference between the pool bottom and pipe outlet elevation was measured. Elevations above the pipe outlet indicated almost linear rise until the end of steam discharge. During the cooling periods the measurements of the bottom third of the pool first had an increasing trend although there was no heat input from outside. This was due to thermal diffusion downwards from the higher elevations. Heat-up in the gas space of the wet well was quite strong, first due to compression by pressure build-up and then by heat conduction from the hot dry well compartment via the intermediate floor and test vessel walls and by convection from the upper layers of the hot pool water. The gas space

PPOOLEX experiments on thermal stratification and mixing

International Nuclear Information System (INIS)

Puustinen, M.; Laine, J.; Raesaenen, A.

2009-08-01

The results of the thermal stratification experiments in 2008 with the PPOOLEX test facility are presented. PPOOLEX is a closed vessel divided into two compartments, dry well and wet well. Extra temperature measurements for capturing different aspects of the investigated phenomena were added before the experiments. The main purpose of the experiment series was to generate verification data for evaluating the capability of GOTHIC code to predict stratification and mixing phenomena. Altogether six experiments were carried out. Heat-up periods of several thousand seconds by steam injection into the dry well compartment and from there into the wet well water pool were recorded. The initial water bulk temperature was 20 deg. C. Cooling periods of several days were included in three experiments. A large difference between the pool bottom and top layer temperature was measured when small steam flow rates were used. With higher flow rates the mixing effect of steam discharge delayed the start of stratification until the pool bulk temperature exceeded 50 deg. C. The stratification process was also different in these two cases. With a small flow rate stratification was observed only above and just below the blowdown pipe outlet elevation. With a higher flow rate over a 30 deg. C temperature difference between the pool bottom and pipe outlet elevation was measured. Elevations above the pipe outlet indicated almost linear rise until the end of steam discharge. During the cooling periods the measurements of the bottom third of the pool first had an increasing trend although there was no heat input from outside. This was due to thermal diffusion downwards from the higher elevations. Heat-up in the gas space of the wet well was quite strong, first due to compression by pressure build-up and then by heat conduction from the hot dry well compartment via the intermediate floor and test vessel walls and by convection from the upper layers of the hot pool water. The gas space

Application of cardiovascular disease risk prediction models and the relevance of novel biomarkers to risk stratification in Asian Indians.

Science.gov (United States)

Kanjilal, S; Rao, V S; Mukherjee, M; Natesha, B K; Renuka, K S; Sibi, K; Iyengar, S S; Kakkar, Vijay V

2008-01-01

The increasing pressure on health resources has led to the emergence of risk assessment as an essential tool in the management of cardiovascular disease (CVD). Concern exists regarding the validity of their generalization to all populations. Existing risk scoring models do not incorporate emerging 'novel' risk factors. In this context, the aim of the study was to examine the relevance of British, European, and Framingham predictive CVD risk scores to the asymptomatic high risk Indian population. Blood samples drawn from the participants were analyzed for various 'traditional' and 'novel' biomarkers, and their CVD risk factor profiling was also done. The Framingham model defined only 5% of the study cohort to be at high risk, which appears to be an underestimation of CVD risk in this genetically predisposed population. These subjects at high risk had significantly elevated levels of lipid, pro-inflammatory, pro-thrombotic, and serological markers. It is more relevant to develop risk predictive scores for application to the Indian population. This study substantiates the argument that alternative approaches to risk stratification are required in order to make them more adaptable and applicable to different populations with varying risk factor and disease patterns.

Temperature stratification in a hot water tank with circulation pipe

DEFF Research Database (Denmark)

Andersen, Elsa

1998-01-01

The aim of the project is to investigate the change in temperature stratification due to the operation of a circulation pipe. Further, putting forward rules for design of pipe inlet in order not to disturb the temperature stratification in the hot water tank. A validated computer model based on t...

Stratification issues in the primary system. Review of available validation experiments and State-of-the-Art in modelling capabilities (StratRev)

International Nuclear Information System (INIS)

Westin, J.; Henriksson, M.; Paettikangas, T.; Toppila, T.; Raemae, T.; Kudinov, P.; Anglart, H.

2009-08-01

The objective of the present report is to review available validation experiments and State-of-the-Art in modelling of stratification and mixing in the primary system of Light Water Reactors. A topical workshop was arranged in Aelvkarleby in June 2008 within the framework of BWR-OG, and the presentations from various utilities showed that stratification issues are not unusual and can cause costly stops in the production. It is desirable to take actions in order to reduce the probability for stratification to occur, and to develop well-validated and accepted tools and procedures for analyzing upcoming stratification events. A research plan covering the main questions is outlined, and a few suggestions regarding more limited research activities are given. Since many of the stratification events results in thermal loads that are localized in time and space, CFD is a suitable tool. However, the often very large and complex geometry posses a great challenge to CFD, and it is important to perform a step-by-step increase in complexity with intermediate validation versus relevant experimental data. The ultimate goal is to establish Best Practice Guidelines that can be followed both by utilities and authorities in case of an event including stratification and thermal loads. An extension of the existing Best Practice Guidelines for CFD in nuclear safety applications developed by OECD/NEA is thus suggested as a relevant target for a continuation project. (au)

Stratification issues in the primary system. Review of available validation experiments and State-of-the-Art in modelling capabilities (StratRev)

Energy Technology Data Exchange (ETDEWEB)

Westin, J.; Henriksson, M. (Vattenfall Research and Development AB (Sweden)); Paettikangas, T. (VTT (Finland)); Toppila, T.; Raemae, T. (Fortum Nuclear Services Ltd (Finland)); Kudinov, P. (KTH Nuclear Power Safety (Sweden)); Anglart, H. (KTH Nuclear Reactor Technology (Sweden))

2009-08-15

The objective of the present report is to review available validation experiments and State-of-the-Art in modelling of stratification and mixing in the primary system of Light Water Reactors. A topical workshop was arranged in AElvkarleby in June 2008 within the framework of BWR-OG, and the presentations from various utilities showed that stratification issues are not unusual and can cause costly stops in the production. It is desirable to take actions in order to reduce the probability for stratification to occur, and to develop well-validated and accepted tools and procedures for analyzing upcoming stratification events. A research plan covering the main questions is outlined, and a few suggestions regarding more limited research activities are given. Since many of the stratification events results in thermal loads that are localized in time and space, CFD is a suitable tool. However, the often very large and complex geometry posses a great challenge to CFD, and it is important to perform a step-by-step increase in complexity with intermediate validation versus relevant experimental data. The ultimate goal is to establish Best Practice Guidelines that can be followed both by utilities and authorities in case of an event including stratification and thermal loads. An extension of the existing Best Practice Guidelines for CFD in nuclear safety applications developed by OECD/NEA is thus suggested as a relevant target for a continuation project. (au)

Experimental study on the thermal stratification in the branch of NPP

Energy Technology Data Exchange (ETDEWEB)

Kim, Sang Nyung; Hwang, Seong Hong [Kyunghee Univ., Seoul (Korea, Republic of)

2004-02-15

As more experience is accumulated in the operation of existing nuclear power plants, the long term effects of thermal-hydraulic phenomena, unaccounted in the original designs, have been observed. One such phenomenon is thermal stratification, which has caused through-wall cracks, thermal fatigue, unexpected piping displacements and pipe support damage. Thermal stratification is a phenomenon as temperature layers are formed in the component or piping due to the density difference between hot and cold water. The thermal stratification phenomena in nuclear power plant observed in the pressurizer surge line, and in the piping of feedwater system, Safety Injection System(SIS), residual heat removal system (or shutdown cooling system), and chemical and volume control system during the design transients. A set of experiment has been performed to predict the temperature distribution in the branch piping of nuclear power plant(Ulchin unit 3 and 4) due to the turbulent penetration, the heat transfer through valve disk and valve leakage. The test facility scaled down to 1/10 has been designed and constructed to simulate the thermal stratification in the piping of safety injection system and shutdown cooling system of Ulchin 3 and 4. The experimental results show that the turbulent penetration depth could be : extended to the end of the vertical pipe, and thermal stratification due to the heat transfer through the valve disk to the end of horizontal pipe behind the valve disk. Finally, thermal stratification could effected by the location of valve leakage.

Molecular modeling and multiscaling issues for electronic material applications

CERN Document Server

Iwamoto, Nancy; Yuen, Matthew; Fan, Haibo

Volume 1 : Molecular Modeling and Multiscaling Issues for Electronic Material Applications provides a snapshot on the progression of molecular modeling in the electronics industry and how molecular modeling is currently being used to understand material performance to solve relevant issues in this field. This book is intended to introduce the reader to the evolving role of molecular modeling, especially seen through the eyes of the IEEE community involved in material modeling for electronic applications.  Part I presents  the role that quantum mechanics can play in performance prediction, such as properties dependent upon electronic structure, but also shows examples how molecular models may be used in performance diagnostics, especially when chemistry is part of the performance issue.  Part II gives examples of large-scale atomistic methods in material failure and shows several examples of transitioning between grain boundary simulations (on the atomistic level)and large-scale models including an example ...

Experiments and numerical simulations of fluctuating thermal stratification in a branch pipe

Energy Technology Data Exchange (ETDEWEB)

Nakamura, Akira; Murase, Michio; Sasaki, Toru [Inst. of Nuclear Safety System Inc., Mihama, Fukui (Japan); Takenaka, Nobuyuki; Hamatani, Daisuke [Kobe Univ. (Japan)

2002-09-01

Many pipes branch off from the main pipe in plants. When the main flow in the main pipe is hotter than a branch pipe that branches off downward, the hot water penetrates into the branch pipe with the cavity flow that is induced by the main flow and causes thermal stratification. If the interface of the stratification fluctuates in an occluded branch pipe, thermal fatigue may occur in pipe wall. Some experiments and numerical simulations were conducted to elucidate the mechanism of this fluctuating thermal stratification. The vortex structures were observed in the experiments of straight or bent branch pipes. When the main flow was heated and the thermal stratification interface was at the elbow, a ''burst'' phenomenon occurred in the interface in connection with large heat fluctuation. The effects of pipe shape on the length of penetration were investigated in order to modify simulation conditions. The vortex structures and the fluctuating thermal stratification at elbow in the numerical simulation showed good agreement with experiments. (author)

The bio-optical properties of CDOM as descriptor of lake stratification.

Science.gov (United States)

Bracchini, Luca; Dattilo, Arduino Massimo; Hull, Vincent; Loiselle, Steven Arthur; Martini, Silvia; Rossi, Claudio; Santinelli, Chiara; Seritti, Alfredo

2006-11-01

Multivariate statistical techniques are used to demonstrate the fundamental role of CDOM optical properties in the description of water masses during the summer stratification of a deep lake. PC1 was linked with dissolved species and PC2 with suspended particles. In the first principal component that the role of CDOM bio-optical properties give a better description of the stratification of the Salto Lake with respect to temperature. The proposed multivariate approach can be used for the analysis of different stratified aquatic ecosystems in relation to interaction between bio-optical properties and stratification of the water body.

Experimental study on the fluid stratification mechanism in the density lock

International Nuclear Information System (INIS)

Gu Haifeng; Yan Changqi; Sun Licheng

2009-01-01

Visualized experiments were conducted on the forming process of stratification between hot and cold fluids in three tubes with different diameters. The results show that the working fluids were divided into three layers from top to bottom: convective, interfacial, and constant temperature layers. The working fluid in the convective layer always retains the property of a high rate of temperature increase. The rate of temperature increase in the interfacial layer gradually decreased from top to bottom and was less than that in the convective layer. The working fluid temperature in the constant-temperature layer remained stable. Based on the experimental study, we built a simplified theoretical model and analyzed the stratification mechanism. The results indicate the following stratification mechanism: because of the existence of the transition points in the heat transfer modes, the differences in the rates of temperature increase appear. These differences result in the appearance of fluid stratification. In addition, research on the process of stratification under different conditions tells us that the structure of the density lock influences the position of the transition point. The density lock with a structure of variable cross-sectional grids can effectively control the position of the transition points of the heat transfer modes. (author)

Integrated collector storage solar water heater: Temperature stratification

International Nuclear Information System (INIS)

Garnier, C.; Currie, J.; Muneer, T.

2009-01-01

An analysis of the temperature stratification inside an Integrated Collector Storage Solar Water Heater (ICS-SWH) was carried out. The system takes the form of a rectangular-shaped box incorporating the solar collector and storage tank into a single unit and was optimised for simulation in Scottish weather conditions. A 3-month experimental study on the ICS-SWH was undertaken in order to provide empirical data for comparison with the computed results. Using a previously developed macro model; a number of improvements were made. The initial macro model was able to generate corresponding water bulk temperature in the collector with a given hourly incident solar radiation, ambient temperature and inlet water temperature and therefore able to predict ICS-SWH performance. The new model was able to compute the bulk water temperature variation in different SWH collectors for a given aspect ratio and the water temperature along the height of the collector (temperature stratification). Computed longitudinal temperature stratification results obtained were found to be in close agreement with the experimental data.

Rotating compressible fluids under strong stratification

Czech Academy of Sciences Publication Activity Database

Feireisl, Eduard; Lu, Y.; Novotný, A.

2014-01-01

Roč. 19, October (2014), s. 11-18 ISSN 1468-1218 Keywords : rotating fluid * compressible Navier-Stokes * strong stratification Subject RIV: BA - General Mathematics Impact factor: 2.519, year: 2014 http://www.sciencedirect.com/science/article/pii/S1468121814000212#

Combustion stratification study of partially premixed combustion using Fourier transform analysis of OH* chemiluminescence images

KAUST Repository

Izadi Najafabadi, Mohammad

2017-11-06

A relatively high level of stratification (qualitatively: lack of homogeneity) is one of the main advantages of partially premixed combustion over the homogeneous charge compression ignition concept. Stratification can smooth the heat release rate and improve the controllability of combustion. In order to compare stratification levels of different partially premixed combustion strategies or other combustion concepts, an objective and meaningful definition of “stratification level” is required. Such a definition is currently lacking; qualitative/quantitative definitions in the literature cannot properly distinguish various levels of stratification. The main purpose of this study is to objectively define combustion stratification (not to be confused with fuel stratification) based on high-speed OH* chemiluminescence imaging, which is assumed to provide spatial information regarding heat release. Stratification essentially being equivalent to spatial structure, we base our definition on two-dimensional Fourier transforms of photographs of OH* chemiluminescence. A light-duty optical diesel engine has been used to perform the OH* bandpass imaging on. Four experimental points are evaluated, with injection timings in the homogeneous regime as well as in the stratified partially premixed combustion regime. Two-dimensional Fourier transforms translate these chemiluminescence images into a range of spatial frequencies. The frequency information is used to define combustion stratification, using a novel normalization procedure. The results indicate that this new definition, based on Fourier analysis of OH* bandpass images, overcomes the drawbacks of previous definitions used in the literature and is a promising method to compare the level of combustion stratification between different experiments.

Acoustic study of stratification region of melts in In-Se system

International Nuclear Information System (INIS)

Glazov, V.M.; Kim, S.G.; Nurova, K.B.

1989-01-01

Stratification region of melts in In-Se system was studied in detail with the use of the method of measuring ultrasound velocity. The curve, limiting the region of stratification into two liquid solutions was plotted. It is shown that the curve is characterized as symmetrical finodal

Methods to determine stratification efficiency of thermal energy storage processes–Review and theoretical comparison

DEFF Research Database (Denmark)

Haller, Michel; Cruickshank, Chynthia; Streicher, Wolfgang

2009-01-01

This paper reviews different methods that have been proposed to characterize thermal stratification in energy storages from a theoretical point of view. Specifically, this paper focuses on the methods that can be used to determine the ability of a storage to promote and maintain stratification...... during charging, storing and discharging, and represent this ability with a single numerical value in terms of a stratification efficiency for a given experiment or under given boundary conditions. Existing methods for calculating stratification efficiencies have been applied to hypothetical storage...

Fundamental Interactions in Gasoline Compression Ignition Engines with Fuel Stratification

Science.gov (United States)

Wolk, Benjamin Matthew

Transportation accounted for 28% of the total U.S. energy demand in 2011, with 93% of U.S. transportation energy coming from petroleum. The large impact of the transportation sector on global climate change necessitates more-efficient, cleaner-burning internal combustion engine operating strategies. One such strategy that has received substantial research attention in the last decade is Homogeneous Charge Compression Ignition (HCCI). Although the efficiency and emissions benefits of HCCI are well established, practical limits on the operating range of HCCI engines have inhibited their application in consumer vehicles. One such limit is at high load, where the pressure rise rate in the combustion chamber becomes excessively large. Fuel stratification is a potential strategy for reducing the maximum pressure rise rate in HCCI engines. The aim is to introduce reactivity gradients through fuel stratification to promote sequential auto-ignition rather than a bulk-ignition, as in the homogeneous case. A gasoline-fueled compression ignition engine with fuel stratification is termed a Gasoline Compression Ignition (GCI) engine. Although a reasonable amount of experimental research has been performed for fuel stratification in GCI engines, a clear understanding of how the fundamental in-cylinder processes of fuel spray evaporation, mixing, and heat release contribute to the observed phenomena is lacking. Of particular interest is gasoline's pressure sensitive low-temperature chemistry and how it impacts the sequential auto-ignition of the stratified charge. In order to computationally study GCI with fuel stratification using three-dimensional computational fluid dynamics (CFD) and chemical kinetics, two reduced mechanisms have been developed. The reduced mechanisms were developed from a large, detailed mechanism with about 1400 species for a 4-component gasoline surrogate. The two versions of the reduced mechanism developed in this work are: (1) a 96-species version and (2

Investigation of the Solvis stratification inlet pipe for solar tanks

DEFF Research Database (Denmark)

Andersen, Elsa; Jordan, Ulrike; Shah, Louise Jivan

2004-01-01

Since the 1960’ties the influence of the thermal stratification in hot water tanks on the thermal performance of solar heating systems has been studied intensively. It was found, that the thermal performance of a solar heating system is increasing for increasing thermal stratification in the hot...... water tank. The temperature of the storage water heated by the solar collector loop usually varies strongly during the day. In order to reach a good thermal stratification in the tank, different types of pipes, plates, diffusers and other devices have been investigated in the past (e.g. Loehrke, 1979...... conditions. Temperature measurements were carried out and an optical method called Particle Image Velocimetry (PIV) was used to visualize the flow around the flaps....

Molecularly Imprinted Nanomaterials for Sensor Applications

Science.gov (United States)

Irshad, Muhammad; Iqbal, Naseer; Mujahid, Adnan; Afzal, Adeel; Hussain, Tajamal; Sharif, Ahsan; Ahmad, Ejaz; Athar, Muhammad Makshoof

2013-01-01

Molecular imprinting is a well-established technology to mimic antibody-antigen interaction in a synthetic platform. Molecularly imprinted polymers and nanomaterials usually possess outstanding recognition capabilities. Imprinted nanostructured materials are characterized by their small sizes, large reactive surface area and, most importantly, with rapid and specific analysis of analytes due to the formation of template driven recognition cavities within the matrix. The excellent recognition and selectivity offered by this class of materials towards a target analyte have found applications in many areas, such as separation science, analysis of organic pollutants in water, environmental analysis of trace gases, chemical or biological sensors, biochemical assays, fabricating artificial receptors, nanotechnology, etc. We present here a concise overview and recent developments in nanostructured imprinted materials with respect to various sensor systems, e.g., electrochemical, optical and mass sensitive, etc. Finally, in light of recent studies, we conclude the article with future perspectives and foreseen applications of imprinted nanomaterials in chemical sensors. PMID:28348356

Temperature Stratification in a Cryogenic Fuel Tank

Data.gov (United States)

National Aeronautics and Space Administration — A reduced dynamical model describing temperature stratification effects driven by natural convection in a liquid hydrogen cryogenic fuel tank has been developed. It...

Correction of population stratification in large multi-ethnic association studies.

Directory of Open Access Journals (Sweden)

David Serre

2008-01-01

Full Text Available The vast majority of genetic risk factors for complex diseases have, taken individually, a small effect on the end phenotype. Population-based association studies therefore need very large sample sizes to detect significant differences between affected and non-affected individuals. Including thousands of affected individuals in a study requires recruitment in numerous centers, possibly from different geographic regions. Unfortunately such a recruitment strategy is likely to complicate the study design and to generate concerns regarding population stratification.We analyzed 9,751 individuals representing three main ethnic groups - Europeans, Arabs and South Asians - that had been enrolled from 154 centers involving 52 countries for a global case/control study of acute myocardial infarction. All individuals were genotyped at 103 candidate genes using 1,536 SNPs selected with a tagging strategy that captures most of the genetic diversity in different populations. We show that relying solely on self-reported ethnicity is not sufficient to exclude population stratification and we present additional methods to identify and correct for stratification.Our results highlight the importance of carefully addressing population stratification and of carefully "cleaning" the sample prior to analyses to obtain stronger signals of association and to avoid spurious results.

On Stratification in Changing Higher Education: The "Analysis of Status" Revisited

Science.gov (United States)

Bloch, Roland; Mitterle, Alexander

2017-01-01

This article seeks to shed light on current dynamics of stratification in changing higher education and proposes an analytical perspective to account for these dynamics based on Martin Trow's work on "the analysis of status." In research on higher education, the term "stratification" is generally understood as a metaphor that…

Propagation of 3D internal gravity wave beams in a slowly varying stratification

Science.gov (United States)

Fan, Boyu; Akylas, T. R.

2017-11-01

The time-mean flows induced by internal gravity wave beams (IGWB) with 3D variations have been shown to have dramatic implications for long-term IGWB dynamics. While uniform stratifications are convenient both theoretically and in the laboratory, stratifications in the ocean can vary by more than an order of magnitude over the ocean depth. Here, in view of this fact, we study the propagation of a 3D IGWB in a slowly varying stratification. We assume that the stratification varies slowly relative to the local variations in the wave profile. In the 2D case, the IGWB bends in response to the changing stratification, but nonlinear effects are minor even in the finite amplitude regime. For a 3D IGWB, in addition to bending, we find that nonlinearity results in the transfer of energy from waves to a large-scale time-mean flow associated with the mean potential vorticity, similar to IGWB behavior in a uniform stratification. In a weakly nonlinear setting, we derive coupled evolution equations that govern this process. We also use these equations to determine the stability properties of 2D IGWB to 3D perturbations. These findings indicate that 3D effects may be relevant and possibly fundamental to IGWB dynamics in nature. Supported by NSF Grant DMS-1512925.

Thermal stratification in storage tanks of integrated collector storage solar water heaters

International Nuclear Information System (INIS)

Oshchepkov, M.Y.; Frid, S.E.

2015-01-01

To determine the influence of the shape of the tank, the installation angle, and the magnitude of the absorbed heat flux on thermal stratification in integrated collector-storage solar water heaters, numerical simulation of thermal convection in tanks of different shapes and same volume was carried out. Idealized two-dimensional models were studied; auto model stratification profiles were obtained at the constant heat flux. The shape of the tank, the pattern of the heat flux dynamics, the adiabatic mixing on the circulation rate and the degree of stratification were shown to have significant influence. (authors)

An Improved Model of Cryogenic Propellant Stratification in a Rotating, Reduced Gravity Environment

Science.gov (United States)

Oliveira, Justin; Kirk, Daniel R.; Schallhorn, Paul A.; Piquero, Jorge L.; Campbell, Mike; Chase, Sukhdeep

2007-01-01

This paper builds on a series of analytical literature models used to predict thermal stratification within rocket propellant tanks. The primary contribution to the literature is to add the effect of tank rotation and to demonstrate the influence of rotation on stratification times and temperatures. This work also looks levels of thermal stratification for generic propellant tanks (cylindrical shapes) over a parametric range of upper-stage coast times, heating levels, rotation rates, and gravity levels.

Characteristics of multiple auroral inverted-V structures and the problem of magnetospheric plasma stratification

International Nuclear Information System (INIS)

Antonova, E.E.; Stepanova, M.V.; Teltzov, M.V.; Tverskoy, B.A.

1993-01-01

The concept of hot stratification of magnetospheric plasma is presented. The stratification mechanism is based on the assumption that in the center of plasma sheet the pressure is approximately isotropic and under steady state conditions the gradient and curvature drift currents play the principal role. The number of formed structures is determined by the parameter of stratification. 7 figs., 2 tabs

Thermal stratification built up in hot water tank with different inlet stratifiers

DEFF Research Database (Denmark)

Dragsted, Janne; Furbo, Simon; Dannemand, Mark

2017-01-01

Thermal stratification in a water storage tank can strongly increase the thermal performance of solar heating systems. Thermal stratification can be built up in a storage tank during charge, if the heated water enters through an inlet stratifier. Experiments with a test tank have been carried out...... in order to elucidate how well thermal stratification is established in the tank with differently designed inlet stratifiers under different controlled laboratory conditions. The investigated inlet stratifiers are from Solvis GmbH & Co KG and EyeCular Technologies ApS. The inlet stratifier from Solvis Gmb...... for Solvis GmbH & Co KG had a better performance at 4 l/min. In the intermediate charge test the stratifier from EyeCular Technologies ApS had a better performance in terms of maintaining the thermal stratification in the storage tank while charging with a relative low temperature. [All rights reserved...

Study of thermal and hydraulic efficiency of supersonic tube of temperature stratification

Science.gov (United States)

Tsynaeva, Anna A.; Nikitin, Maxim N.; Tsynaeva, Ekaterina A.

2017-10-01

Efficiency of supersonic pipe for temperature stratification with finned subsonic surface of heat transfer is the major of this paper. Thermal and hydraulic analyses of this pipe were conducted to asses effects from installation of longitudinal rectangular and parabolic fins as well as studs of cylindrical, rectangular and parabolic profiles. The analysis was performed based on refined empirical equations of similarity, dedicated to heat transfer of high-speed gas flow with plain wall, and Kármán equation with Nikuradze constants. Results revealed cylindrical studs (with height-to-diameter ratio of 5:1) to be 1.5 times more efficient than rectangular fins of the same height. At the same time rectangular fins (with height-to-thickness ratio of 5:1) were tend to enhance heat transfer rate up to 2.67 times compared to bare walls from subsonic side of the pipe. Longitudinal parabolic fins have minuscule effect on combined efficiency of considered pipe since extra head losses void any gain of heat transfer. Obtained results provide perspective of increasing efficiency of supersonic tube for temperature stratification. This significantly broadens device applicability in thermostatting systems for equipment, cooling systems for energy converting machinery, turbine blades and aerotechnics.

Glacial ocean circulation and stratification explained by reduced atmospheric temperature.

Science.gov (United States)

Jansen, Malte F

2017-01-03

Earth's climate has undergone dramatic shifts between glacial and interglacial time periods, with high-latitude temperature changes on the order of 5-10 °C. These climatic shifts have been associated with major rearrangements in the deep ocean circulation and stratification, which have likely played an important role in the observed atmospheric carbon dioxide swings by affecting the partitioning of carbon between the atmosphere and the ocean. The mechanisms by which the deep ocean circulation changed, however, are still unclear and represent a major challenge to our understanding of glacial climates. This study shows that various inferred changes in the deep ocean circulation and stratification between glacial and interglacial climates can be interpreted as a direct consequence of atmospheric temperature differences. Colder atmospheric temperatures lead to increased sea ice cover and formation rate around Antarctica. The associated enhanced brine rejection leads to a strongly increased deep ocean stratification, consistent with high abyssal salinities inferred for the last glacial maximum. The increased stratification goes together with a weakening and shoaling of the interhemispheric overturning circulation, again consistent with proxy evidence for the last glacial. The shallower interhemispheric overturning circulation makes room for slowly moving water of Antarctic origin, which explains the observed middepth radiocarbon age maximum and may play an important role in ocean carbon storage.

Economic Stratification Differentiates Home Gardens in the Maya Village of Pomuch, Mexico

NARCIS (Netherlands)

Poot-Pool, W.S.; Wal, van der J.C.; Flores-Guido, S.; Pat-Fernández, J.M.; Esparza-Olguín, L.

2012-01-01

Economic Stratification Differentiates Home Gardens in the Maya Village of Pomuch, Mexico. In this paper, we analyze if economic stratification of peasant families in a Maya village in the Yucatán Peninsula of Mexico influences species composition and structure of home gardens. Our general

Molecular quantum dynamics. From theory to applications

International Nuclear Information System (INIS)

Gatti, Fabien

2014-01-01

An educational and accessible introduction to the field of molecular quantum dynamics. Illustrates the importance of the topic for broad areas of science: from astrophysics and the physics of the atmosphere, over elementary processes in chemistry, to biological processes. Presents chosen examples of striking applications, highlighting success stories, summarized by the internationally renowned experts. Including a foreword by Lorenz Cederbaum (University Heidelberg, Germany). This book focuses on current applications of molecular quantum dynamics. Examples from all main subjects in the field, presented by the internationally renowned experts, illustrate the importance of the domain. Recent success in helping to understand experimental observations in fields like heterogeneous catalysis, photochemistry, reactive scattering, optical spectroscopy, or femto- and attosecond chemistry and spectroscopy underline that nuclear quantum mechanical effects affect many areas of chemical and physical research. In contrast to standard quantum chemistry calculations, where the nuclei are treated classically, molecular quantum dynamics can cover quantum mechanical effects in their motion. Many examples, ranging from fundamental to applied problems, are known today that are impacted by nuclear quantum mechanical effects, including phenomena like tunneling, zero point energy effects, or non-adiabatic transitions. Being important to correctly understand many observations in chemical, organic and biological systems, or for the understanding of molecular spectroscopy, the range of applications covered in this book comprises broad areas of science: from astrophysics and the physics and chemistry of the atmosphere, over elementary processes in chemistry, to biological processes (such as the first steps of photosynthesis or vision). Nevertheless, many researchers refrain from entering this domain. The book ''Molecular Quantum Dynamics'' offers them an accessible introduction. Although the

Molecular quantum dynamics. From theory to applications

Energy Technology Data Exchange (ETDEWEB)

Gatti, Fabien (ed.) [Montpellier 2 Univ. (France). Inst. Charles Gerhardt - CNRS 5253

2014-09-01

An educational and accessible introduction to the field of molecular quantum dynamics. Illustrates the importance of the topic for broad areas of science: from astrophysics and the physics of the atmosphere, over elementary processes in chemistry, to biological processes. Presents chosen examples of striking applications, highlighting success stories, summarized by the internationally renowned experts. Including a foreword by Lorenz Cederbaum (University Heidelberg, Germany). This book focuses on current applications of molecular quantum dynamics. Examples from all main subjects in the field, presented by the internationally renowned experts, illustrate the importance of the domain. Recent success in helping to understand experimental observations in fields like heterogeneous catalysis, photochemistry, reactive scattering, optical spectroscopy, or femto- and attosecond chemistry and spectroscopy underline that nuclear quantum mechanical effects affect many areas of chemical and physical research. In contrast to standard quantum chemistry calculations, where the nuclei are treated classically, molecular quantum dynamics can cover quantum mechanical effects in their motion. Many examples, ranging from fundamental to applied problems, are known today that are impacted by nuclear quantum mechanical effects, including phenomena like tunneling, zero point energy effects, or non-adiabatic transitions. Being important to correctly understand many observations in chemical, organic and biological systems, or for the understanding of molecular spectroscopy, the range of applications covered in this book comprises broad areas of science: from astrophysics and the physics and chemistry of the atmosphere, over elementary processes in chemistry, to biological processes (such as the first steps of photosynthesis or vision). Nevertheless, many researchers refrain from entering this domain. The book ''Molecular Quantum Dynamics'' offers them an accessible

Analysis of ABC (D) stratification for screening patients with gastric cancer.

Science.gov (United States)

Kudo, Tomohiro; Kakizaki, Satoru; Sohara, Naondo; Onozato, Yasuhiro; Okamura, Shinichi; Inui, Yoshikatsu; Mori, Masatomo

2011-11-21

To evaluate the value of ABC (D) stratification [combination of serum pepsinogen and Helicobacter pylori (H. pylori) antibody] of patients with gastric cancer. Ninety-five consecutive patients with gastric cancer were enrolled into the study. The serum pepsinogen I (PG I)/pepsinogen II (PG II) and H. pylori antibody levels were measured. Patients were classified into five groups of ABC (D) stratification according to their serological status. Endoscopic findings of atrophic gastritis and histological differentiation were also analyzed in relation to the ABC (D) stratification. The mean patient age was (67.9 ± 8.9) years. Three patients (3.2%) were classified into group A, 7 patients (7.4%) into group A', 27 patients (28.4%) into group B, 54 patients (56.8%) into group C, and 4 patients (4.2%) into group D, respectively. There were only three cases in group A when the patients taking acid proton pump inhibitors and those who had undergone eradication therapy for H. pylori (group A') were excluded. These three cases had mucosal atrophy in the grey zone according to the diagnostic manual of ABC (D) stratification. Histologically, the mean age of the patients with well differentiated adenocarcinoma was significantly higher than that of the patients with poorly differentiated adenocarcinoma (P ABC (D) stratification is a good method for screening patients with gastric cancers. Endoscopy is needed for grey zone cases to check the extent of mucosal atrophy.

Genetic Stratification in Myeloid Diseases: From Risk Assessment to Clinical Decision Support Tool

Directory of Open Access Journals (Sweden)

Yishai Ofran

2014-10-01

Full Text Available Genetic aberrations have become a dominant factor in the stratification of myeloid malignancies. Cytogenetic and a few mutation studies are the backbone of risk assessment models of myeloid malignancies which are a major consideration in clinical decisions, especially patient assignment for allogeneic stem cell transplantation. Progress in our understanding of the genetic basis of the pathogenesis of myeloid malignancies and the growing capabilities of mass sequencing may add new roles for the clinical usage of genetic data. A few recently identified mutations recognized to be associated with specific diseases or clinical scenarios may soon become part of the diagnostic criteria of such conditions. Mutational studies may also advance our capabilities for a more efficient patient selection process, assigning the most effective therapy at the best timing for each patient. The clinical utility of genetic data is anticipated to advance further with the adoption of deep sequencing and next-generation sequencing techniques. We herein suggest some future potential applications of sequential genetic data to identify pending deteriorations at time points which are the best for aggressive interventions such as allogeneic stem cell transplantation. Genetics is moving from being mostly a prognostic factor to becoming a multitasking decision support tool for hematologists. Physicians must pay attention to advances in molecular hematology as it will soon be accessible and influential for most of our patients.

Stratification and prognostic relevance of Jass’s molecular classification of colorectal cancer

OpenAIRE

Inti eZlobec; Inti eZlobec; Michel P Bihl; Anja eFoerster; Alex eRufle; Luigi eTerracciano; Alessandro eLugli; Alessandro eLugli

2012-01-01

Background: The current proposed model of colorectal tumorigenesis is based primarily on CpG island methylator phenotype (CIMP), microsatellite instability (MSI), KRAS, BRAF, and methylation status of 0-6-Methylguanine DNA Methyltransferase (MGMT) and classifies tumors into 5 subgroups. The aim of this study is to validate this molecular classification and test its prognostic relevance. Methods: 302 patients were included in this study. Molecular analysis was performed for 5 CIMP-related pro...

Theory and application of quantum molecular dynamics

CERN Document Server

Zeng Hui Zhang, John

1999-01-01

This book provides a detailed presentation of modern quantum theories for treating the reaction dynamics of small molecular systems. Its main focus is on the recent development of successful quantum dynamics theories and computational methods for studying the molecular reactive scattering process, with specific applications given in detail for a number of benchmark chemical reaction systems in the gas phase and the gas surface. In contrast to traditional books on collision in physics focusing on abstract theory for nonreactive scattering, this book deals with both the development and the appli

Structural evaluation method study and procedure development for pressurizer surge line subjected to thermal stratification phenomenon

International Nuclear Information System (INIS)

Zhang Yixiong; Yu Xiaofei; Ai Honglei

2014-01-01

Thermal stratification phenomenon of pressurizer surge line can lead potential threaten to plant safety. Base on the mechanism of thermal stratification occurrence, Fr number is used to judge whether the stratification occurs or not. Also the method of calculating heat transfer coefficient is investigated. Theoretically the 3-dimension thermal stress induced by thermal stratification is decoupled to 1-dimension global stress and 2-dimension local stress, and the complex 3-dimension problem is simplified into a combination of 1-dimension and 2-dimension to compute the stress. Comply with criterion RCC-M, the complete structure integrity evaluation is accomplished after combining the stress produced by thermal stratification and the stresses produced by the other loadings. In order to match the above combined analysis method, Code SYSTUS and ROCOCO are developed. By means of aforesaid evaluation method and corresponding analysis program, surge line thermal stratification of Qinshan Phase II Extension project is investigated in this paper. And the results show that structural integrity of the pressurizer surge line affected by thermal stratification still satisfies criterion RCC-M. (authors)

[Advances of Molecular Diagnostic Techniques Application in Clinical Diagnosis.

Science.gov (United States)

Ying, Bin-Wu

2016-11-01

Over the past 20 years,clinical molecular diagnostic technology has made rapid development,and became the most promising field in clinical laboratory medicine.In particular,with the development of genomics,clinical molecular diagnostic methods will reveal the nature of clinical diseases in a deeper level,thus guiding the clinical diagnosis and treatments.Many molecular diagnostic projects have been routinely applied in clinical works.This paper reviews the advances on application of clinical diagnostic techniques in infectious disease,tumor and genetic disorders,including nucleic acid amplification,biochip,next-generation sequencing,and automation molecular system,and so on.

Simulation of atmosphere stratification in the HDR test facility with the CONTAIN code

International Nuclear Information System (INIS)

Skerlavaj, A.; Mavko, B.; Kljenak, I.

2001-01-01

The test E11.2 'Hydrogen distribution in loop flow geometry', which was performed in the Heissdampf Reaktor containment test facility in Germany, was simulated with the CONTAIN computer code. The predicted pressure history and thermal stratification are in relatively good agreement with the measurements. The compositional stratification within the containment was qualitatively well predicted, although the degree of the stratification in the dome area was slightly underestimated. The analysis of simulation results enabled a better understanding of the physical phenomena during the test.(author)

Social Stratification and Cooperative Behavior in Spatial Prisoners' Dilemma Games.

Directory of Open Access Journals (Sweden)

Peng Lu

Full Text Available It has been a long-lasting pursuit to promote cooperation, and this study aims to promote cooperation via the combination of social stratification and the spatial prisoners' dilemma game. It is previously assumed that agents share the identical payoff matrix, but the stratification or diversity exists and exerts influences in real societies. Thus, two additional classes, elites and scoundrels, derive from and coexist with the existing class, commons. Three classes have different payoff matrices. We construct a model where agents play the prisoners' dilemma game with neighbors. It indicates that stratification and temptation jointly influence cooperation. Temptation permanently reduces cooperation; elites play a positive role in promoting cooperation while scoundrels undermine it. As the temptation getting larger and larger, elites play a more and more positive and critical role while scoundrels' negative effect becomes weaker and weaker, and it is more obvious when temptation goes beyond its threshold.

The application of molecular topology for ulcerative colitis drug discovery.

Science.gov (United States)

Bellera, Carolina L; Di Ianni, Mauricio E; Talevi, Alan

2018-01-01

Although the therapeutic arsenal against ulcerative colitis has greatly expanded (including the revolutionary advent of biologics), there remain patients who are refractory to current medications while the safety of the available therapeutics could also be improved. Molecular topology provides a theoretic framework for the discovery of new therapeutic agents in a very efficient manner, and its applications in the field of ulcerative colitis have slowly begun to flourish. Areas covered: After discussing the basics of molecular topology, the authors review QSAR models focusing on validated targets for the treatment of ulcerative colitis, entirely or partially based on topological descriptors. Expert opinion: The application of molecular topology to ulcerative colitis drug discovery is still very limited, and many of the existing reports seem to be strictly theoretic, with no experimental validation or practical applications. Interestingly, mechanism-independent models based on phenotypic responses have recently been reported. Such models are in agreement with the recent interest raised by network pharmacology as a potential solution for complex disorders. These and other similar studies applying molecular topology suggest that some therapeutic categories may present a 'topological pattern' that goes beyond a specific mechanism of action.

Numerical investigation on thermal stratification and striping phenomena in various coolants

International Nuclear Information System (INIS)

Zumao Yang; Muramatsu, Toshiharu

2000-02-01

It is important to study thermal stratification and striping phenomena for they can induce thermal fatigue failure of structures. This presentation uses the AQUA code, which has been developed in Japan Nuclear Cycle Development Institute (JNC), to investigate the characteristics of these thermal phenomena in water, liquid sodium, liquid lead and carbon dioxide gas. There are altogether eight calculated cases with same Richardson number and initial inlet hot velocity in thermal stratification calculations, in which four cases have same velocity difference between inlet hot and cold fluid, the other four cases with same temperature difference. The calculated results show: (1) The fluid's properties and initial conditions have considerable effects on thermal stratification, which is decided by the combination of such as thermal conduction, viscous dissipation and buoyant force, etc., and (2) The gas has distinctive thermal stratification characteristics from those of liquid because for horizontal flow in the transportation of momentum and energy, the drastic exchange usually happens at the hot-cold interface for liquid, however, the buoyancy and natural convection make the quick exchange position depart from the hot-cold interface for gas. In thermal striping analysis, only the first step work has been finished. The calculated results show: (1) the vertical flow has some difference in thermal stratification characteristics from those of horizontal flow, and (2) For deep thermal striping analysis in the calculated area, more attention should be paid to the center area along Z-direction for liquid and small velocity area for gas. (author)

Vertical mixing and coherent anticyclones in the ocean: the role of stratification

Directory of Open Access Journals (Sweden)

I. Koszalka

2010-01-01

Full Text Available The role played by wind-forced anticyclones in the vertical transport and mixing at the ocean mesoscale is investigated with a primitive-equation numerical model in an idealized configuration. The focus of this work is to determine how the stratification impacts such transport.

The flows, forced only at the surface by an idealized wind forcing, are predominantly horizontal and, on average, quasigeostrophic. Inside vortex cores and intense filaments, however, the dynamics is strongly ageostrophic.

Mesoscale anticyclones appear as "islands" of increased penetration of wind energy into the ocean interior and they represent the maxima of available potential energy. The amount of available potential energy is directly correlated with the degree of stratification.

The wind energy injected at the surface is transferred at depth through the generation and subsequent straining effect of Vortex Rossby Waves (VRWs, and through near-inertial internal oscillations trapped inside anticyclonic vortices. Both these mechanisms are affected by stratification. Stronger transfer but larger confinement close to the surface is found when the stratification is stronger. For weaker stratification, vertical mixing close to the surface is less intense but below about 150 m attains substantially higher values due to an increased contribution of both VRWs, whose time scale is on the order of few days, and of near-inertial motions, with a time scale of few hours.

SINEs of progress: Mobile element applications to molecular ecology.

Science.gov (United States)

Ray, David A

2007-01-01

Mobile elements represent a unique and under-utilized set of tools for molecular ecologists. They are essentially homoplasy-free characters with the ability to be genotyped in a simple and efficient manner. Interpretation of the data generated using mobile elements can be simple compared to other genetic markers. They exist in a wide variety of taxa and are useful over a wide selection of temporal ranges within those taxa. Furthermore, their mode of evolution instills them with another advantage over other types of multilocus genotype data: the ability to determine loci applicable to a range of time spans in the history of a taxon. In this review, I discuss the application of mobile element markers, especially short interspersed elements (SINEs), to phylogenetic and population data, with an emphasis on potential applications to molecular ecology.

Implementing system-wide risk stratification approaches: A review of critical success and failure factors.

Science.gov (United States)

Huckel Schneider, Carmen; Gillespie, James A; Wilson, Andrew

2017-05-01

Risk stratification has become a widely used tool for linking people identified at risk of health deterioration to the most appropriate evidence-based care. This article systematically reviews recent literature to determine key factors that have been identified as critical enablers and/or barriers to successful implementation of risk stratification tools at a system level. A systematic search found 23 articles and four promising protocols for inclusion in the review, covering the use to 20 different risk stratification tools. These articles reported on only a small fraction of the risk stratification tools used in health systems; suggesting that while the development and statistical validation of risk stratification algorithms is widely reported, there has been little published evaluation of how they are implemented in real-world settings. Controlled studies provided some evidence that the use of risk stratification tools in combination with a care management plan offer patient benefits and that the use of a risk stratification tool to determine components of a care management plan may contribute to reductions in hospital readmissions, patient satisfaction and improved patient outcomes. Studies with the strongest focus on implementation used qualitative and case study methods. Among these, the literature converged on four key areas of implementation that were found to be critical for overcoming barriers to success: the engagement of clinicians and safeguarding equity, both of which address barriers of acceptance; the health system context to address administrative, political and system design barriers; and data management and integration to address logistical barriers.

Spin-Assisted Layer-by-Layer Assembly: Variation of Stratification as Studied with Neutron Reflectivity

International Nuclear Information System (INIS)

Kharlampieva, Eugenia; Kozlovskaya, Veronika; Chan, Jennifer; Ankner, John Francis; Tsukruk, Vladimir V.

2009-01-01

We apply neutron reflectivity to probe the internal structure of spin-assisted layer-by-layer (LbL) films composed of electrostatically assembled polyelectrolytes. We find that the level of stratification and the degree of layer intermixing can be controlled by varying the type and concentration of salt during LbL assembly. We observe well-defined layer structure in spin-assisted LbL films when deposited from salt-free solutions. These films feature 2-nm-thick bilayers, which are ∼3-fold thicker than those in dipped LbL films assembled under similar conditions. Addition of a 10mM phosphate buffer promotes progressive layer inter-diffusion with increasing distance from the substrate. However, adding 0.1M NaCl to the phosphate buffer solution restores the layer stratification. We also find that spin-assisted LbL films obtained from buffer solutions are more highly stratified as compared to the highly intermixed layers seen in dipped LbL films assembled from buffer. Our results yield new insight into the mechanism of spin-assisted LbL assembly that should prove useful for biotechnological applications.

Thermal stratification in a scaled-down suppression pool of the Fukushima Daiichi nuclear power plants

Energy Technology Data Exchange (ETDEWEB)

Jo, Byeongnam, E-mail: jo@vis.t.u-tokyo.ac.jp [Nuclear Professional School, The University of Tokyo, 2-22 Shirakata, Tokai-mura, Ibaraki 319-1188 (Japan); Erkan, Nejdet [Nuclear Professional School, The University of Tokyo, 2-22 Shirakata, Tokai-mura, Ibaraki 319-1188 (Japan); Takahashi, Shinji [Department of Nuclear Engineering and Management, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656 (Japan); Song, Daehun [Nuclear Professional School, The University of Tokyo, 2-22 Shirakata, Tokai-mura, Ibaraki 319-1188 (Japan); Hyundai and Kia Corporate R& D Division, Hyundai Motors, 772-1, Jangduk-dong, Hwaseong-Si, Gyeonggi-Do 445-706 (Korea, Republic of); Sagawa, Wataru; Okamoto, Koji [Nuclear Professional School, The University of Tokyo, 2-22 Shirakata, Tokai-mura, Ibaraki 319-1188 (Japan)

2016-08-15

Highlights: • Thermal stratification was reproduced in a scaled-down suppression pool of the Fukushima Daiichi nuclear power plants. • Horizontal temperature profiles were uniform in the toroidal suppression pool. • Subcooling-steam flow rate map of thermal stratification was obtained. • Steam bubble-induced flow model in suppression pool was suggested. • Bubble frequency strongly depends on the steam flow rate. - Abstract: Thermal stratification in the suppression pool of the Fukushima Daiichi nuclear power plants was experimentally investigated in sub-atmospheric pressure conditions using a 1/20 scale torus shaped setup. The thermal stratification was reproduced in the scaled-down suppression pool and the effect of the steam flow rate on different thermal stratification behaviors was examined for a wide range of steam flow rates. A sparger-type steam injection pipe that emulated Fukushima Daiichi Unit 3 (F1U3) was used. The steam was injected horizontally through 132 holes. The development (formation and disappearance) of thermal stratification was significantly affected by the steam flow rate. Interestingly, the thermal stratification in the suppression pool vanished when subcooling became lower than approximately 5 °C. This occurred because steam bubbles are not well condensed at low subcooling temperatures; therefore, those bubbles generate significant upward momentum, leading to mixing of the water in the suppression pool.

Stratification and Prognostic Relevance of Jass’s Molecular Classification of Colorectal Cancer

International Nuclear Information System (INIS)

Zlobec, Inti; Bihl, Michel P.; Foerster, Anja; Rufle, Alex; Terracciano, Luigi; Lugli, Alessandro

2012-01-01

Background: The current proposed model of colorectal tumorigenesis is based primarily on CpG island methylator phenotype (CIMP), microsatellite instability (MSI), KRAS, BRAF, and methylation status of 0-6-Methylguanine DNA Methyltransferase (MGMT) and classifies tumors into five subgroups. The aim of this study is to validate this molecular classification and test its prognostic relevance. Methods: Three hundred two patients were included in this study. Molecular analysis was performed for five CIMP-related promoters (CRABP1, MLH1, p16INK4a, CACNA1G, NEUROG1), MGMT, MSI, KRAS, and BRAF. Methylation in at least 4 promoters or in one to three promoters was considered CIMP-high and CIMP-low (CIMP-H/L), respectively. Results: CIMP-H, CIMP-L, and CIMP-negative were found in 7.1, 43, and 49.9% cases, respectively. One hundred twenty-three tumors (41%) could not be classified into any one of the proposed molecular subgroups, including 107 CIMP-L, 14 CIMP-H, and two CIMP-negative cases. The 10 year survival rate for CIMP-high patients [22.6% (95%CI: 7–43)] was significantly lower than for CIMP-L or CIMP-negative (p = 0.0295). Only the combined analysis of BRAF and CIMP (negative versus L/H) led to distinct prognostic subgroups. Conclusion: Although CIMP status has an effect on outcome, our results underline the need for standardized definitions of low- and high-level CIMP, which clearly hinders an effective prognostic and molecular classification of colorectal cancer.

Stratification and Prognostic Relevance of Jass’s Molecular Classification of Colorectal Cancer

Energy Technology Data Exchange (ETDEWEB)

Zlobec, Inti [Institute of Pathology, University of Bern, Bern (Switzerland); Institute for Pathology, University Hospital Basel, Basel (Switzerland); Bihl, Michel P.; Foerster, Anja; Rufle, Alex; Terracciano, Luigi [Institute for Pathology, University Hospital Basel, Basel (Switzerland); Lugli, Alessandro, E-mail: inti.zlobec@pathology.unibe.ch [Institute of Pathology, University of Bern, Bern (Switzerland); Institute for Pathology, University Hospital Basel, Basel (Switzerland)

2012-02-27

Background: The current proposed model of colorectal tumorigenesis is based primarily on CpG island methylator phenotype (CIMP), microsatellite instability (MSI), KRAS, BRAF, and methylation status of 0-6-Methylguanine DNA Methyltransferase (MGMT) and classifies tumors into five subgroups. The aim of this study is to validate this molecular classification and test its prognostic relevance. Methods: Three hundred two patients were included in this study. Molecular analysis was performed for five CIMP-related promoters (CRABP1, MLH1, p16INK4a, CACNA1G, NEUROG1), MGMT, MSI, KRAS, and BRAF. Methylation in at least 4 promoters or in one to three promoters was considered CIMP-high and CIMP-low (CIMP-H/L), respectively. Results: CIMP-H, CIMP-L, and CIMP-negative were found in 7.1, 43, and 49.9% cases, respectively. One hundred twenty-three tumors (41%) could not be classified into any one of the proposed molecular subgroups, including 107 CIMP-L, 14 CIMP-H, and two CIMP-negative cases. The 10 year survival rate for CIMP-high patients [22.6% (95%CI: 7–43)] was significantly lower than for CIMP-L or CIMP-negative (p = 0.0295). Only the combined analysis of BRAF and CIMP (negative versus L/H) led to distinct prognostic subgroups. Conclusion: Although CIMP status has an effect on outcome, our results underline the need for standardized definitions of low- and high-level CIMP, which clearly hinders an effective prognostic and molecular classification of colorectal cancer.

Stratification and prognostic relevance of Jass’s molecular classification of colorectal cancer

Directory of Open Access Journals (Sweden)

Inti eZlobec

2012-02-01

Full Text Available Background: The current proposed model of colorectal tumorigenesis is based primarily on CpG island methylator phenotype (CIMP, microsatellite instability (MSI, KRAS, BRAF, and methylation status of 0-6-Methylguanine DNA Methyltransferase (MGMT and classifies tumors into 5 subgroups. The aim of this study is to validate this molecular classification and test its prognostic relevance. Methods: 302 patients were included in this study. Molecular analysis was performed for 5 CIMP-related promoters (CRABP1, MLH1, p16INK4a, CACNA1G, NEUROG1, MGMT, MSI, KRAS and BRAF. Tumors were CIMP-high or CIMP-low if ≥4 and 1-3 promoters were methylated, respectively. Results: CIMP-high, CIMP-low and CIMP–negative were found in 7.1%, 43% and 49.9% cases, respectively. 123 tumors (41% could not be classified into any one of the proposed molecular subgroups, including 107 CIMP-low, 14 CIMP-high and 2 CIMP-negative cases. The 10-year survival rate for CIMP-high patients (22.6% (95%CI: 7-43 was significantly lower than for CIMP-low or CIMP-negative (p=0.0295. Only the combined analysis of BRAF and CIMP (negative versus low/high led to distinct prognostic subgroups. Conclusion: Although CIMP status has an effect on outcome, our results underline the need for standardized definitions of low- and high-level CIMP, which clearly hinders an effective prognostic and molecular classification of colorectal cancer.

Multi-target molecular imaging and its progress in research and application

International Nuclear Information System (INIS)

Tang Ganghua

2011-01-01

Multi-target molecular imaging (MMI) is an important field of research in molecular imaging. It includes multi-tracer multi-target molecular imaging(MTMI), fusion-molecule multi-target imaging (FMMI), coupling-molecule multi-target imaging (CMMI), and multi-target multifunctional molecular imaging(MMMI). In this paper,imaging modes of MMI are reviewed, and potential applications of positron emission tomography MMI in near future are discussed. (author)

The formation of low-angle eolian stratification through the migration of protodunes

Science.gov (United States)

Ewing, R. C.; Phillips, J. D.; Weymer, B. A.; Barrineaux, P.; Bowling, R.; Nittrouer, J. A.

2017-12-01

Protodunes are low-relief, slipfaceless migrating bed forms that represent the emergent form of eolian sand dunes. Protodunes develop as cm-scale topography out of a flat bed of sand and evolve spatially and temporally into dunes with angle-of-repose slipfaces. Protodunes at White Sands Dune Field in New Mexico form at the upwind, trailing margin of the field, on dune stoss slopes, and in interdune areas. Here we analyze protodunes at the upwind margin of White Sands by coupling 200 mHz ground penetrating radar (GPR) with time-series high-resolution topography to characterize the origin and evolution of protodune stratification and the stratigraphic transition into fully developed dunes. We surveyed a 780m transect in the resultant transport direction of the dune field from SW to NE from sand patches through protodunes and into the first dune. We used airborne lidar surveys and structure-from-motion photogrammetry from 2007, 2008, 2009, 2010, 2015, and 2016. We find that protodune stratification forms at angles between 0-10 degrees by protodune migration. Dip angles increase as protodune amplitude increases along the transect. Accumulation of low-angle stratification increases across the first 650m and ranges from none to subcritical. Nearly aggradational accumulation of low-angle stratification occurs over the last 100m and is a precursor to angle-of-repose slipface formation. The origins of the aggradation and slipface development appear to be linked to protodune merging, dune interactions, and possibly to the development of a dune field-scale boundary layer. Protodunes and the formation of low-angle stratification at the upwind margin of White Sands are a good analog to the initiation of dune field development from sand sheets and the formation of low-angle stratification found at the base of eolian successions in the stratigraphic record.

External validation of scoring systems in risk stratification of upper gastrointestinal bleeding.

Science.gov (United States)

Anchu, Anna Cherian; Mohsina, Subair; Sureshkumar, Sathasivam; Mahalakshmy, T; Kate, Vikram

2017-03-01

The aim of this study was to externally validate the four commonly used scoring systems in the risk stratification of patients with upper gastrointestinal bleed (UGIB). Patients of UGIB who underwent endoscopy within 24 h of presentation were stratified prospectively using the pre-endoscopy Rockall score (PRS) >0, complete Rockall score (CRS) >2, Glasgow Blatchford bleeding scores (GBS) >3, and modified GBS (m-GBS) >3 scores. Patients were followed up to 30 days. Prognostic accuracy of the scores was done by comparing areas under curve (AUC) in terms of overall risk stratification, re-bleeding, mortality, need for intervention, and length of hospitalization. One hundred and seventy-five patients were studied. All four scores performed better in the overall risk stratification on AUC [PRS = 0.566 (CI: 0.481-0.651; p-0.043)/CRS = 0.712 (CI: 0.634-0.790); p0.001); m-GBS = 0.802 (CI: 0.734-0.871; pbleed [AUC-0.679 (CI: 0.579-0.780; p = 0.003)]. All the scoring systems except PRS were found to be significantly better in detecting 30-day mortality with a high AUC (CRS = 0.798; p-0.042)/GBS = 0.833; p-0.023); m-GBS = 0.816; p-0.031). All four scores demonstrated significant accuracy in the risk stratification of non-variceal patients; however, only GBS and m-GBS were significant in variceal etiology. Higher cutoff scores achieved better sensitivity/specificity [RS > 0 (50/60.8), CRS > 1 (87.5/50.6), GBS > 7 (88.5/63.3), m-GBS > 7(82.3/72.6)] in the risk stratification. GBS and m-GBS appear to be more valid in risk stratification of UGIB patients in this region. Higher cutoff values achieved better predictive accuracy.

Fatigue of LMFBR piping due to flow stratification

International Nuclear Information System (INIS)

Woodward, W.S.

1983-01-01

Flow stratification due to reverse flow was simulated in a 1/5-scale water model of a LMFBR primary pipe loop. The stratified flow was observed to have a dynamic interface region which oscillated in a wave pattern. The behavior of the interface was characterized in terms of location, local temperature fluctuation and duration for various reverse flow conditions. A structural assessment was performed to determine the effects of stratified flow on the fatigue life of the pipe. Both the static and dynamic aspects of flow stratification were examined. The dynamic interface produces thermal striping on the inside of the pipe wall which is shown to have the most deleterious effect on the pipe wall and produce significant fatigue damage relative to a static interface

Fatigue of LMFBR piping due to flow stratification

Energy Technology Data Exchange (ETDEWEB)

Woodward, W.S.

1983-01-01

Flow stratification due to reverse flow was simulated in a 1/5-scale water model of a LMFBR primary pipe loop. The stratified flow was observed to have a dynamic interface region which oscillated in a wave pattern. The behavior of the interface was characterized in terms of location, local temperature fluctuation and duration for various reverse flow conditions. A structural assessment was performed to determine the effects of stratified flow on the fatigue life of the pipe. Both the static and dynamic aspects of flow stratification were examined. The dynamic interface produces thermal striping on the inside of the pipe wall which is shown to have the most deleterious effect on the pipe wall and produce significant fatigue damage relative to a static interface.

A review on nanomechanical resonators and their applications in sensors and molecular transportation

International Nuclear Information System (INIS)

Arash, Behrouz; Rabczuk, Timon; Jiang, Jin-Wu

2015-01-01

Nanotechnology has opened a new area in science and engineering, leading to the development of novel nano-electromechanical systems such as nanoresonators with ultra-high resonant frequencies. The ultra-high-frequency resonators facilitate wide-ranging applications such as ultra-high sensitive sensing, molecular transportation, molecular separation, high-frequency signal processing, and biological imaging. This paper reviews recent studies on dynamic characteristics of nanoresonators. A variety of theoretical approaches, i.e., continuum modeling, molecular simulations, and multiscale methods, in modeling of nanoresonators are reviewed. The potential application of nanoresonators in design of sensor devices and molecular transportation systems is introduced. The essence of nanoresonator sensors for detection of atoms and molecules with vibration and wave propagation analyses is outlined. The sensitivity of the resonator sensors and their feasibility in detecting different atoms and molecules are particularly discussed. Furthermore, the applicability of molecular transportation using the propagation of mechanical waves in nanoresonators is presented. An extended application of the transportation methods for building nanofiltering systems with ultra-high selectivity is surveyed. The article aims to provide an up-to-date review on the mechanical properties and applications of nanoresonators, and inspire additional potential of the resonators

A review on nanomechanical resonators and their applications in sensors and molecular transportation

Energy Technology Data Exchange (ETDEWEB)

Arash, Behrouz; Rabczuk, Timon, E-mail: timon.rabczuk@uni-weimar.de [Institute of Structural Mechanics, Bauhaus Universität Weimar, Marienstr 15, D-99423 Weimar (Germany); Jiang, Jin-Wu [Shanghai Institute of Applied Mathematics and Mechanics, Shanghai Key Laboratory of Mechanics in Energy Engineering, Shanghai University, Shanghai 200072 (China)

2015-06-15

Nanotechnology has opened a new area in science and engineering, leading to the development of novel nano-electromechanical systems such as nanoresonators with ultra-high resonant frequencies. The ultra-high-frequency resonators facilitate wide-ranging applications such as ultra-high sensitive sensing, molecular transportation, molecular separation, high-frequency signal processing, and biological imaging. This paper reviews recent studies on dynamic characteristics of nanoresonators. A variety of theoretical approaches, i.e., continuum modeling, molecular simulations, and multiscale methods, in modeling of nanoresonators are reviewed. The potential application of nanoresonators in design of sensor devices and molecular transportation systems is introduced. The essence of nanoresonator sensors for detection of atoms and molecules with vibration and wave propagation analyses is outlined. The sensitivity of the resonator sensors and their feasibility in detecting different atoms and molecules are particularly discussed. Furthermore, the applicability of molecular transportation using the propagation of mechanical waves in nanoresonators is presented. An extended application of the transportation methods for building nanofiltering systems with ultra-high selectivity is surveyed. The article aims to provide an up-to-date review on the mechanical properties and applications of nanoresonators, and inspire additional potential of the resonators.

Resonance Energy Transfer Molecular Imaging Application in Biomedicine

Directory of Open Access Journals (Sweden)

NIE Da-hong1,2;TANG Gang-hua1,3

2016-11-01

Full Text Available Resonance energy transfer molecular imaging (RETI can markedly improve signal intensity and tissue penetrating capacity of optical imaging, and have huge potential application in the deep-tissue optical imaging in vivo. Resonance energy transfer (RET is an energy transition from the donor to an acceptor that is in close proximity, including non-radiative resonance energy transfer and radiative resonance energy transfer. RETI is an optical imaging technology that is based on RET. RETI mainly contains fluorescence resonance energy transfer imaging (FRETI, bioluminescence resonance energy transfer imaging (BRETI, chemiluminescence resonance energy transfer imaging (CRETI, and radiative resonance energy transfer imaging (RRETI. RETI is the hot field of molecular imaging research and has been widely used in the fields of biology and medicine. This review mainly focuses on RETI principle and application in biomedicine.

Segmental distribution of some common molecular markers for colorectal cancer (CRC): influencing factors and potential implications.

Science.gov (United States)

Papagiorgis, Petros Christakis

2016-05-01

Proximal and distal colorectal cancers (CRCs) are regarded as distinct disease entities, evolving through different genetic pathways and showing multiple clinicopathological and molecular differences. Segmental distribution of some common markers (e.g., KRAS, EGFR, Ki-67, Bcl-2, COX-2) is clinically important, potentially affecting their prognostic or predictive value. However, this distribution is influenced by a variety of factors such as the anatomical overlap of tumorigenic molecular events, associations of some markers with other clinicopathological features (stage and/or grade), and wide methodological variability in markers' assessment. All these factors represent principal influences followed by intratumoral heterogeneity and geographic variation in the frequency of detection of particular markers, whereas the role of other potential influences (e.g., pre-adjuvant treatment, interaction between markers) remains rather unclear. Better understanding and elucidation of the various influences may provide a more accurate picture of the segmental distribution of molecular markers in CRC, potentially allowing the application of a novel patient stratification for treatment, based on particular molecular profiles in combination with tumor location.

Investigating Summer Thermal Stratification in Lake Ontario

Science.gov (United States)

James, S. C.; Arifin, R. R.; Craig, P. M.; Hamlet, A. F.

2017-12-01

Seasonal temperature variations establish strong vertical density gradients (thermoclines) between the epilimnion and hypolimnion. Accurate simulation of vertical mixing and seasonal stratification of large lakes is a crucial element of the thermodynamic coupling between lakes and the atmosphere in integrated models. Time-varying thermal stratification patterns can be accurately simulated with the versatile Environmental Fluid Dynamics Code (EFDC). Lake Ontario bathymetry was interpolated onto a 2-km-resolution curvilinear grid with vertical layering using a new approach in EFDC+, the so-called "sigma-zed" coordinate system which allows the number of vertical layers to be varied based on water depth. Inflow from the Niagara River and outflow to the St. Lawrence River in conjunction with hourly meteorological data from seven local weather stations plus three-hourly data from the North American Regional Reanalysis govern the hydrodynamic and thermodynamic responses of the Lake. EFDC+'s evaporation algorithm was updated to more accurately simulate net surface heat fluxes. A new vertical mixing scheme from Vinçon-Leite that implements different eddy diffusivity formulations above and below the thermocline was compared to results from the original Mellor-Yamada vertical mixing scheme. The model was calibrated by adjusting solar-radiation absorption coefficients in addition to background horizontal and vertical mixing parameters. Model skill was evaluated by comparing measured and simulated vertical temperature profiles at shallow (20 m) and deep (180 m) locations on the Lake. These model improvements, especially the new sigma-zed vertical discretization, accurately capture thermal-stratification patterns with low root-mean-squared errors when using the Vinçon-Leite vertical mixing scheme.

Determining the core stratification in white dwarfs with asteroseismology

Directory of Open Access Journals (Sweden)

Charpinet S.

2017-01-01

Full Text Available Using the forward modeling approach and a new parameterization for the core chemical stratification in ZZ Ceti stars, we test several situations typical of the usually limited constraints available, such as small numbers of observed independent modes, to carry out asteroseismology of these stars. We find that, even with a limited number of modes, the core chemical stratification (in particular, the location of the steep chemical transitions expected in the oxygen profile can be determined quite precisely due to the significant sensitivity of some confined modes to partial reflexion (trapping effects. These effects are similar to the well known trapping induced by the shallower chemical transitions at the edge of the core and at the bottom of the H-rich envelope. We also find that success to unravel the core structure depends on the information content of the available seismic data. In some cases, it may not be possible to isolate a unique, well-defined seismic solution and the problem remains degenerate. Our results establish that constraining the core chemical stratification in white dwarf stars based solely on asteroseismology is possible, an opportunity that we have started to exploit.

Coolant stratification and its thermohydrodynamic specificity under natural circulation in horizontal steam generator collectors

Energy Technology Data Exchange (ETDEWEB)

Blagovechtchenski, A.; Leontieva, V.; Mitriukhin, A. [Saint-Petersburg Technical Univ. (Russian Federation)

1997-12-31

The experiments and the test facilities for the study of the stratification phenomenon in the hot plenum of reactor and the upper parts of the steam generator collectors in a nuclear power plant are described. The aim of the experiments was to define the conditions of the stratification initiation, to study the temperature field in the upper part, the definition of the characteristics in the stratification layer, and also to study the factors which cause the intensity of the stagnant volume cooling.

Coolant stratification and its thermohydrodynamic specificity under natural circulation in horizontal steam generator collectors

Energy Technology Data Exchange (ETDEWEB)

Blagovechtchenski, A; Leontieva, V; Mitriukhin, A [Saint-Petersburg Technical Univ. (Russian Federation)

1998-12-31

The experiments and the test facilities for the study of the stratification phenomenon in the hot plenum of reactor and the upper parts of the steam generator collectors in a nuclear power plant are described. The aim of the experiments was to define the conditions of the stratification initiation, to study the temperature field in the upper part, the definition of the characteristics in the stratification layer, and also to study the factors which cause the intensity of the stagnant volume cooling.

Biomarkers for Risk Stratification of Neoplastic Progression in Barrett Esophagus

Directory of Open Access Journals (Sweden)

Marjon Kerkhof

2007-01-01

Full Text Available Barrett esophagus (BE is caused by chronic gastroesophageal reflux and predisposes to the development of esophageal adenocarcinoma through different grades of dysplasia. Only a subset of BE patients will finally develop esophageal adenocarcinoma. The majority will therefore not benefit from an endoscopic surveillance program, based on the histological identification of dysplasia. Several studies have been performed to find additional biomarkers that can be used to detect the subgroup of patients with an increased risk of developing malignancy in BE. In this review, we will summarize the most promising tissue biomarkers, i.e. proliferation/cell cycle proteins, tumor suppressor genes, adhesion molecules, DNA ploidy status and inflammation associated markers, that can be used for risk stratification in BE, and discuss their respective clinical application.

Risk stratification in emergency patients by copeptin

DEFF Research Database (Denmark)

Iversen, Kasper; Gøtze, Jens P; Dalsgaard, Morten

2014-01-01

BACKGROUND: Rapid risk stratification is a core task in emergency medicine. Identifying patients at high and low risk shortly after admission could help clinical decision-making regarding treatment, level of observation, allocation of resources and post discharge follow-up. The purpose of the pre...

Quantitative risk stratification in Markov chains with limiting conditional distributions.

Science.gov (United States)

Chan, David C; Pollett, Philip K; Weinstein, Milton C

2009-01-01

Many clinical decisions require patient risk stratification. The authors introduce the concept of limiting conditional distributions, which describe the equilibrium proportion of surviving patients occupying each disease state in a Markov chain with death. Such distributions can quantitatively describe risk stratification. The authors first establish conditions for the existence of a positive limiting conditional distribution in a general Markov chain and describe a framework for risk stratification using the limiting conditional distribution. They then apply their framework to a clinical example of a treatment indicated for high-risk patients, first to infer the risk of patients selected for treatment in clinical trials and then to predict the outcomes of expanding treatment to other populations of risk. For the general chain, a positive limiting conditional distribution exists only if patients in the earliest state have the lowest combined risk of progression or death. The authors show that in their general framework, outcomes and population risk are interchangeable. For the clinical example, they estimate that previous clinical trials have selected the upper quintile of patient risk for this treatment, but they also show that expanded treatment would weakly dominate this degree of targeted treatment, and universal treatment may be cost-effective. Limiting conditional distributions exist in most Markov models of progressive diseases and are well suited to represent risk stratification quantitatively. This framework can characterize patient risk in clinical trials and predict outcomes for other populations of risk.

Randomization in clinical trials: stratification or minimization? The HERMES free simulation software.

Science.gov (United States)

Fron Chabouis, Hélène; Chabouis, Francis; Gillaizeau, Florence; Durieux, Pierre; Chatellier, Gilles; Ruse, N Dorin; Attal, Jean-Pierre

2014-01-01

Operative clinical trials are often small and open-label. Randomization is therefore very important. Stratification and minimization are two randomization options in such trials. The first aim of this study was to compare stratification and minimization in terms of predictability and balance in order to help investigators choose the most appropriate allocation method. Our second aim was to evaluate the influence of various parameters on the performance of these techniques. The created software generated patients according to chosen trial parameters (e.g., number of important prognostic factors, number of operators or centers, etc.) and computed predictability and balance indicators for several stratification and minimization methods over a given number of simulations. Block size and proportion of random allocations could be chosen. A reference trial was chosen (50 patients, 1 prognostic factor, and 2 operators) and eight other trials derived from this reference trial were modeled. Predictability and balance indicators were calculated from 10,000 simulations per trial. Minimization performed better with complex trials (e.g., smaller sample size, increasing number of prognostic factors, and operators); stratification imbalance increased when the number of strata increased. An inverse correlation between imbalance and predictability was observed. A compromise between predictability and imbalance still has to be found by the investigator but our software (HERMES) gives concrete reasons for choosing between stratification and minimization; it can be downloaded free of charge. This software will help investigators choose the appropriate randomization method in future two-arm trials.

Double stratification effects in chemically reactive squeezed Sutterby fluid flow with thermal radiation and mixed convection

Directory of Open Access Journals (Sweden)

S. Ahmad

2018-03-01

Full Text Available A current analysis is carried out to study theoretically the mixed convection characteristics in squeezing flow of Sutterby fluid in squeezed channel. The constitutive equation of Sutterby model is utilized to characterize the rheology of squeezing phenomenon. Flow characteristics are explored with dual stratification. In flowing fluid which contains heat and mass transport, the first order chemical reaction and radiative heat flux affect the transport phenomenon. The systems of non-linear governing equations have been modulating which then solved by mean of convergent approach (Homotopy Analysis Method. The graphs are reported and illustrated for emerging parameters. Through graphical explanations, drag force, rate of heat and mass transport are conversed for different pertinent parameters. It is found that heat and mass transport rate decays with dominant double stratified parameters and chemical reaction parameter. The present two-dimensional examination is applicable in some of the engineering processes and industrial fluid mechanics. Keywords: Squeezing flow, Sutterby fluid model, Mixed convection, Double stratification, Thermal radiation, Chemical reaction

Dependence of offshore wind turbine fatigue loads on atmospheric stratification

DEFF Research Database (Denmark)

Hansen, Kurt Schaldemose; Larsen, Gunner Chr.; Ott, Søren

2014-01-01

The stratification of the atmospheric boundary layer (ABL) is classified in terms of the M-O length and subsequently used to determine the relationship between ABL stability and the fatigue loads of a wind turbine located inside an offshore wind farm. Recorded equivalent fatigue loads, representi...... conditions. In general, impact of ABL stratification is clearly seen on wake affected inflow cases for both blade and tower fatigue loads. However, the character of this dependence varies significantly with the type of inflow conditions – e.g. single wake inflow or multiple wake inflow....

Response of water temperatures and stratification to changing climate in three lakes with different morphometry

Science.gov (United States)

Magee, Madeline R.; Wu, Chin H.

2017-12-01

Water temperatures and stratification are important drivers for ecological and water quality processes within lake systems, and changes in these with increases in air temperature and changes to wind speeds may have significant ecological consequences. To properly manage these systems under changing climate, it is important to understand the effects of increasing air temperatures and wind speed changes in lakes of different depths and surface areas. In this study, we simulate three lakes that vary in depth and surface area to elucidate the effects of the observed increasing air temperatures and decreasing wind speeds on lake thermal variables (water temperature, stratification dates, strength of stratification, and surface heat fluxes) over a century (1911-2014). For all three lakes, simulations showed that epilimnetic temperatures increased, hypolimnetic temperatures decreased, the length of the stratified season increased due to earlier stratification onset and later fall overturn, stability increased, and longwave and sensible heat fluxes at the surface increased. Overall, lake depth influences the presence of stratification, Schmidt stability, and differences in surface heat flux, while lake surface area influences differences in hypolimnion temperature, hypolimnetic heating, variability of Schmidt stability, and stratification onset and fall overturn dates. Larger surface area lakes have greater wind mixing due to increased surface momentum. Climate perturbations indicate that our larger study lakes have more variability in temperature and stratification variables than the smaller lakes, and this variability increases with larger wind speeds. For all study lakes, Pearson correlations and climate perturbation scenarios indicate that wind speed has a large effect on temperature and stratification variables, sometimes greater than changes in air temperature, and wind can act to either amplify or mitigate the effect of warmer air temperatures on lake thermal

Molecular biology applications to infectious diseases diagnostic; Aplicaciones de la Biologica Molecular al diagnostico de enfermedades infecciosas

Energy Technology Data Exchange (ETDEWEB)

NONE

2001-07-01

This project goes directed to the applications of the techniques of molecular biology in hepatitis virus.A great advance of these techniques it allows its application to the diagnose molecular and it becomes indispensable to have these fundamental tools in the field of the Health Public for the detection precocious, pursuit of the treatment, the one predicts and the evolution of the patient hepatitis bearing virus technical.Use of molecular biology to increase the handling and the control of the patients with hepatitis B and C and to detect an adult numbers of positive cases by means of the training and integration of all the countries participating.Implement the technique of PCR to identify the virus of the hepatitis B and C,implement quantification methods and genotipification for these virus.

Monitoring of coolant temperature stratification on piping components in WWER-440 NPPs

International Nuclear Information System (INIS)

Hudcovsky, S.; Slanina, M.; Badiar, S.

2001-01-01

The presentation deals with the aims of non-standard temperature measurements installed on primary and secondary circuit in WWER-440 NPPs, explains reasons of coolant temperature stratification on the piping components. It describes methods of the measurements on pipings, range of installation of the temperature measurements in EBO and EMO units and illustrates results of measurements of coolant temperature stratification. (Authors)

Molecular stratification and precision medicine in systemic sclerosis from genomic and proteomic data.

Science.gov (United States)

Martyanov, Viktor; Whitfield, Michael L

2016-01-01

The goal of this review is to summarize recent advances into the pathogenesis and treatment of systemic sclerosis (SSc) from genomic and proteomic studies. Intrinsic gene expression-driven molecular subtypes of SSc are reproducible across three independent datasets. These subsets are a consistent feature of SSc and are found in multiple end-target tissues, such as skin and esophagus. Intrinsic subsets as well as baseline levels of molecular target pathways are potentially predictive of clinical response to specific therapeutics, based on three recent clinical trials. A gene expression-based biomarker of modified Rodnan skin score, a measure of SSc skin severity, can be used as a surrogate outcome metric and has been validated in a recent trial. Proteome analyses have identified novel biomarkers of SSc that correlate with SSc clinical phenotypes. Integrating intrinsic gene expression subset data, baseline molecular pathway information, and serum biomarkers along with surrogate measures of modified Rodnan skin score provides molecular context in SSc clinical trials. With validation, these approaches could be used to match patients with the therapies from which they are most likely to benefit and thus increase the likelihood of clinical improvement.

Applications in atomic and molecular physics

International Nuclear Information System (INIS)

Todd, J.F.J.

1976-01-01

Probably the most extensive area of application of quadrupole mass spectrometry has been that of atomic and molecular physics: it was for this market that the commercial instruments were first introduced and the variety of investigations which have consequently been made possible provides an obvious basis for illustrating the unique features possessed by the mass filter. The account which follows is divided into two main sections. The first deals with general applications of the quadrupole, in which the instrument is used essentially as an analyser for neutral or ionic species, e.g. the monitoring of residual gases and reaction products. The fields of vacuum technology, surface studies and gas phase studies are considered in turn. The second section is devoted to an account of the special applications of quadrupole fields in which use is made of properties such as ion containment. (Auth.)

Non-rigid molecular group theory and its applications

International Nuclear Information System (INIS)

Balasubramanian, K.

1982-06-01

The use of generalized wreath product groups as representations of symmetry groups of nonrigid molecules is considered. Generating function techniques are outlined for nuclear spin statistics and character tables of the symmetry groups of nonrigid molecules. Several applications of nonrigid molecular group theory to NMR spectroscopy, rovibronic splitting and nuclear spin statistics of nonrigid molecules, molecular beam deflection and electric resonance experiments of weakly bound Van der Waal complexes, isomerization processes, configuration interaction calculations and the symmetry of crystals with structural distortions are described. 81 references

Seasonal variations of the upper ocean salinity stratification in the Tropics

Science.gov (United States)

Maes, Christophe; O'Kane, Terence J.

2014-03-01

In comparison to the deep ocean, the upper mixed layer is a region typically characterized by substantial vertical gradients in water properties. Within the Tropics, the rich variability in the vertical shapes and forms that these structures can assume through variation in the atmospheric forcing results in a differential effect in terms of the temperature and salinity stratification. Rather than focusing on the strong halocline above the thermocline, commonly referred to as the salinity barrier layer, the present study takes into account the respective thermal and saline dependencies in the Brunt-Väisälä frequency (N2) in order to isolate the specific role of the salinity stratification in the layers above the main pycnocline. We examine daily vertical profiles of temperature and salinity from an ocean reanalysis over the period 2001-2007. We find significant seasonal variations in the Brunt-Väisälä frequency profiles are limited to the upper 300 m depth. Based on this, we determine the ocean salinity stratification (OSS) to be defined as the stabilizing effect (positive values) due to the haline part of N2 averaged over the upper 300 m. In many regions of the tropics, the OSS contributes 40-50% to N2 as compared to the thermal stratification and, in some specific regions, exceeds it for a few months of the seasonal cycle. Away from the tropics, for example, near the centers of action of the subtropical gyres, there are regions characterized by the permanent absence of OSS. In other regions previously characterized with salinity barrier layers, the OSS obviously shares some common variations; however, we show that where temperature and salinity are mixed over the same depth, the salinity stratification can be significant. In addition, relationships between the OSS and the sea surface salinity are shown to be well defined and quasilinear in the tropics, providing some indication that in the future, analyses that consider both satellite surface salinity

Dependence of offshore wind turbine fatigue loads on atmospheric stratification

International Nuclear Information System (INIS)

Hansen, K S; Larsen, G C; Ott, S

2014-01-01

The stratification of the atmospheric boundary layer (ABL) is classified in terms of the M-O length and subsequently used to determine the relationship between ABL stability and the fatigue loads of a wind turbine located inside an offshore wind farm. Recorded equivalent fatigue loads, representing blade-bending and tower bottom bending, are combined with the operational statistics from the instrumented wind turbine as well as with meteorological statistics defining the inflow conditions. Only a part of all possible inflow conditions are covered through the approximately 8200 hours of combined measurements. The fatigue polar has been determined for an (almost) complete 360° inflow sector for both load sensors, representing mean wind speeds below and above rated wind speed, respectively, with the inflow conditions classified into three different stratification regimes: unstable, neutral and stable conditions. In general, impact of ABL stratification is clearly seen on wake affected inflow cases for both blade and tower fatigue loads. However, the character of this dependence varies significantly with the type of inflow conditions – e.g. single wake inflow or multiple wake inflow

Simulation benchmark based on THAI-experiment on dissolution of a steam stratification by natural convection

Energy Technology Data Exchange (ETDEWEB)

Freitag, M., E-mail: freitag@becker-technologies.com; Schmidt, E.; Gupta, S.; Poss, G.

2016-04-01

Highlights: . • We studied the generation and dissolution of steam stratification in natural convection. • We performed a computer code benchmark including blind and open phases. • The dissolution of stratification predicted only qualitatively by LP and CFD models during the blind simulation phase. - Abstract: Locally enriched hydrogen as in stratification may contribute to early containment failure in the course of severe nuclear reactor accidents. During accident sequences steam might accumulate as well to stratifications which can directly influence the distribution and ignitability of hydrogen mixtures in containments. An international code benchmark including Computational Fluid Dynamics (CFD) and Lumped Parameter (LP) codes was conducted in the frame of the German THAI program. Basis for the benchmark was experiment TH24.3 which investigates the dissolution of a steam layer subject to natural convection in the steam-air atmosphere of the THAI vessel. The test provides validation data for the development of CFD and LP models to simulate the atmosphere in the containment of a nuclear reactor installation. In test TH24.3 saturated steam is injected into the upper third of the vessel forming a stratification layer which is then mixed by a superposed thermal convection. In this paper the simulation benchmark will be evaluated in addition to the general discussion about the experimental transient of test TH24.3. Concerning the steam stratification build-up and dilution of the stratification, the numerical programs showed very different results during the blind evaluation phase, but improved noticeable during open simulation phase.

Variability of stratification according to operation of the tidal power plant in Lake Sihwa, South Korea.

Science.gov (United States)

Woo, S. B.; Song, J. I.; Jang, T. H.; Park, C. J.; Kwon, H. K.

2017-12-01

Artificial forcing according to operation of the tidal power plant (TPP) affects the physical environmental changes near the power plant. Strong turbulence by generation is expected to change the stratification structure of the Lake Sihwa inside. In order to examine the stratification changes by the power plant operation, ship bottom mounted observation were performed for 13 hours using an acoustic Doppler current profiler (ADCP) and Conductivity-Temperature-Depth (CTD) in Lake Sihwa at near TPP. The strong stratification in Sihwa Lake is maintained before TPP operation. The absence of external forces and freshwater inflow from the land forms the stratification in the Lake. Strong winds in a stratification statement lead to two-layer circulation. After wind event, multi-layer velocity structure is formed which lasted for approximately 4 h. After TPP operation, the jet flow was observed in entire water column at the beginning of the power generation. Vortex is formed by strong jet flow and maintained throughout during power generation period. Strong turbulence flow is generated by the turbine blades, enhancing vertical mixing. External forces, which dominantly affect Lake Sihwa, have changed from the wind to the turbulent flow. The stratification was extinguished by strong turbulent flow and becomes fully-mixed state. Changes in stratification structure are expected to affect material transport and ecological environment change continuously.

Signaling pathway deregulation and molecular alterations across pediatric medulloblastomas.

Science.gov (United States)

Lhermitte, B; Blandin, A F; Coca, A; Guerin, E; Durand, A; Entz-Werlé, N

2018-05-15

Medulloblastomas (MBs) account for 15% of brain tumors in children under the age of 15. To date, the overall 5-year survival rate for all children is only around 60%. Recent advances in cancer genomics have led to a fundamental change in medulloblastoma classification and is evolving along with the genomic discoveries, allowing to regularly reclassify this disease. The previous molecular classification defined 4 groups (WNT-activated MB, SHH-activated MB and the groups 3 and 4 characterized partially by NMYC and MYC driven MBs). This stratification moved forward recently to better define these groups and their correlation to outcome. This new stratification into 7 novel subgroups was helpful to lay foundations and complementary data on the understanding regarding molecular pathways and gene mutations underlying medulloblastoma biology. This review was aimed at answering the recent key questions on MB genomics and go further in the relevance of those genes in MB development as well as in their targeted therapies. Copyright © 2018 Elsevier Masson SAS. All rights reserved.

Stratification-Based Outlier Detection over the Deep Web.

Science.gov (United States)

Xian, Xuefeng; Zhao, Pengpeng; Sheng, Victor S; Fang, Ligang; Gu, Caidong; Yang, Yuanfeng; Cui, Zhiming

2016-01-01

For many applications, finding rare instances or outliers can be more interesting than finding common patterns. Existing work in outlier detection never considers the context of deep web. In this paper, we argue that, for many scenarios, it is more meaningful to detect outliers over deep web. In the context of deep web, users must submit queries through a query interface to retrieve corresponding data. Therefore, traditional data mining methods cannot be directly applied. The primary contribution of this paper is to develop a new data mining method for outlier detection over deep web. In our approach, the query space of a deep web data source is stratified based on a pilot sample. Neighborhood sampling and uncertainty sampling are developed in this paper with the goal of improving recall and precision based on stratification. Finally, a careful performance evaluation of our algorithm confirms that our approach can effectively detect outliers in deep web.

Observed variations in stratification and currents in the Zuari estuary, west coast of India

Digital Repository Service at National Institute of Oceanography (India)

Sundar, D.; Unnikrishnan, A.S.; Michael, G.S.; Kankonkar, A.; Nidheesh, A.G.; Subeesh, M.P.

in stratification at different time scales (daily, spring–neap cycle and seasonal) are described. In the mixed tidal regime with semi-diurnal dominance, stratification at higher low water succeeding lower high water is more intense than that at lower low water...

Macro-Micro Linkages and the Role of Mechanisms in Social Stratification Research

Czech Academy of Sciences Publication Activity Database

Veselý, Arnošt; Smith, Michael

2008-01-01

Roč. 44, č. 3 (2008), s. 491-509 ISSN 0038-0288 R&D Projects: GA ČR GA403/08/0109; GA MPS(CZ) 1J/005/04-DP2 Institutional research plan: CEZ:AV0Z70280505 Keywords : Social stratification research * stratification processes * social mechanisms Subject RIV: AO - Sociology, Demography Impact factor: 0.427, year: 2008 http://dlib.lib.cas.cz/3508/

New trends in atomic and molecular physics advanced technological applications

CERN Document Server

2013-01-01

The field of Atomic and Molecular Physics (AMP) has reached significant advances in high–precision experimental measurement techniques. The area covers a wide spectrum ranging from conventional to new emerging multi-disciplinary areas like physics of highly charged ions (HCI), molecular physics, optical science, ultrafast laser technology etc. This book includes the important topics of atomic structure, physics of atomic collision, photoexcitation, photoionization processes, Laser cooling and trapping, Bose Einstein condensation and advanced technology applications of AMP in the fields of astronomy , astrophysics , fusion, biology and nanotechnology. This book is useful for researchers, professors, graduate, post graduate and PhD students dealing with atomic and molecular physics. The book has a wide scope with applications in neighbouring fields like plasma physics, astrophysics, cold collisions, nanotechnology and future fusion energy sources like ITER (international Thermonuclear Experimental Reactor) To...

Numerical solution of chemically reactive non-Newtonian fluid flow: Dual stratification

Science.gov (United States)

Rehman, Khalil Ur; Malik, M. Y.; Khan, Abid Ali; Zehra, Iffat; Zahri, Mostafa; Tahir, M.

2017-12-01

We have found that only a few attempts are available in the literature relatively to the tangent hyperbolic fluid flow induced by stretching cylindrical surfaces. In particular, temperature and concentration stratification effects have not been investigated until now with respect to the tangent hyperbolic fluid model. Therefore, we have considered the tangent hyperbolic fluid flow induced by an acutely inclined cylindrical surface in the presence of both temperature and concentration stratification effects. To be more specific, the fluid flow is attained with the no slip condition, which implies that the bulk motion of the fluid particles is the same as the stretching velocity of a cylindrical surface. Additionally, the flow field situation is manifested with heat generation, mixed convection and chemical reaction effects. The flow partial differential equations give a complete description of the present problem. Therefore, to trace out the solution, a set of suitable transformations is introduced to convert these equations into ordinary differential equations. In addition, a self-coded computational algorithm is executed to inspect the numerical solution of these reduced equations. The effect logs of the involved parameters are provided graphically. Furthermore, the variations of the physical quantities are examined and given with the aid of tables. It is observed that the fluid temperature is a decreasing function of the thermal stratification parameter and a similar trend is noticed for the concentration via the solutal stratification parameter.

Applications of Cerius2, software of molecular simulation

International Nuclear Information System (INIS)

Fernandez G, M.E.; Perez A, M.; Gutierrez W, C.E.

2007-01-01

Most of the investigations have a theoretical sustenance based on molecular simulation. The area of application of molecular simulation is very wide, in the Materials Technology Department assigned to the Applied Sciences Management have been treated problems about metallic nano structures, glasses, interfaces, and molecules, to sustain and to explain some of the experimental results. Energy calculations are carried out to determine minimum energy structures, for later on to carry out calculations of some of their properties; as well as the images simulation of Electron microscopy and X-ray diffraction. (Author)

Potential Impacts of Offshore Wind Farms on North Sea Stratification

Science.gov (United States)

Carpenter, Jeffrey R.; Merckelbach, Lucas; Callies, Ulrich; Clark, Suzanna; Gaslikova, Lidia; Baschek, Burkard

2016-01-01

Advances in offshore wind farm (OWF) technology have recently led to their construction in coastal waters that are deep enough to be seasonally stratified. As tidal currents move past the OWF foundation structures they generate a turbulent wake that will contribute to a mixing of the stratified water column. In this study we show that the mixing generated in this way may have a significant impact on the large-scale stratification of the German Bight region of the North Sea. This region is chosen as the focus of this study since the planning of OWFs is particularly widespread. Using a combination of idealised modelling and in situ measurements, we provide order-of-magnitude estimates of two important time scales that are key to understanding the impacts of OWFs: (i) a mixing time scale, describing how long a complete mixing of the stratification takes, and (ii) an advective time scale, quantifying for how long a water parcel is expected to undergo enhanced wind farm mixing. The results are especially sensitive to both the drag coefficient and type of foundation structure, as well as the evolution of the pycnocline under enhanced mixing conditions—both of which are not well known. With these limitations in mind, the results show that OWFs could impact the large-scale stratification, but only when they occupy extensive shelf regions. They are expected to have very little impact on large-scale stratification at the current capacity in the North Sea, but the impact could be significant in future large-scale development scenarios. PMID:27513754

New trends in atomic and molecular physics. Advanced technological applications

International Nuclear Information System (INIS)

Mohan, Man

2013-01-01

Represents an up-to-date scientific status report on new trends in atomic and molecular physics. Multi-disciplinary approach. Also of interest to researchers in astrophysics and fusion plasma physics. Contains material important for nano- and laser technology. The field of Atomic and Molecular Physics (AMP) has reached significant advances in high-precision experimental measurement techniques. The area covers a wide spectrum ranging from conventional to new emerging multi-disciplinary areas like physics of highly charged ions (HCI), molecular physics, optical science, ultrafast laser technology etc. This book includes the important topics of atomic structure, physics of atomic collision, photoexcitation, photoionization processes, Laser cooling and trapping, Bose Einstein condensation and advanced technology applications of AMP in the fields of astronomy, astrophysics, fusion, biology and nanotechnology. This book is useful for researchers, professors, graduate, post graduate and PhD students dealing with atomic and molecular physics. The book has a wide scope with applications in neighbouring fields like plasma physics, astrophysics, cold collisions, nanotechnology and future fusion energy sources like ITER (international Thermonuclear Experimental Reactor) Tokomak plasma machine which need accurate AMP data.

Stratification of zooplankton in the northwestern Indian Ocean

Digital Repository Service at National Institute of Oceanography (India)

Paulinose, V.T.; Gopalakrishnan, T.C.; Nair, K.K.C.; Aravindakshan, P.N.

Study on stratification of zooplankton in the north western Indian Ocean was carried out with special reference to its relative abundance and distribution. Samples were collected using multiple plankton net, during first cruise of ORV Sagar Kanya...

Complex basis functions for molecular resonances: Methodology and applications

Science.gov (United States)

White, Alec; McCurdy, C. William; Head-Gordon, Martin

The computation of positions and widths of metastable electronic states is a challenge for molecular electronic structure theory because, in addition to the difficulty of the many-body problem, such states obey scattering boundary conditions. These resonances cannot be addressed with naïve application of traditional bound state electronic structure theory. Non-Hermitian electronic structure methods employing complex basis functions is one way that we may rigorously treat resonances within the framework of traditional electronic structure theory. In this talk, I will discuss our recent work in this area including the methodological extension from single determinant SCF-based approaches to highly correlated levels of wavefunction-based theory such as equation of motion coupled cluster and many-body perturbation theory. These approaches provide a hierarchy of theoretical methods for the computation of positions and widths of molecular resonances. Within this framework, we may also examine properties of resonances including the dependence of these parameters on molecular geometry. Some applications of these methods to temporary anions and dianions will also be discussed.

Utilising monitoring and modelling of estuarine environments to investigate catchment conditions responsible for stratification events in a typically well-mixed urbanised estuary

Science.gov (United States)

Lee, Serena B.; Birch, Gavin F.

2012-10-01

Estuarine health is affected by contamination from stormwater, particularly in highly-urbanised environments. For systems where catchment monitoring is insufficient, novel techniques must be employed to determine the impact of urban runoff on receiving water bodies. In the present work, estuarine monitoring and modelling were successfully employed to determine stormwater runoff volumes and establish an appropriate rainfall/runoff relationship capable of replicating fresh-water discharge due to the full range of precipitation conditions in the Sydney Estuary, Australia. Using estuary response to determine relationships between catchment rainfall and runoff is a widely applicable method and may be of assistance in the study of waterways where monitoring fluvial discharges is not practical or is beyond the capacity of management authorities. For the Sydney Estuary, the SCS-CN method replicated rainfall/runoff and was applied in numerical modelling experiments investigating the hydrodynamic characteristics affecting stratification and estuary recovery following high precipitation. Numerical modelling showed stratification in the Sydney Estuary was dominated by fresh-water discharge. Spring tides and up-estuary winds contributed to mixing and neap tides and down-estuary winds enhanced stratification.

Combustion stratification study of partially premixed combustion using Fourier transform analysis of OH* chemiluminescence images

KAUST Repository

Izadi Najafabadi, Mohammad; Somers, Bart; Johansson, Bengt; Dam, Nico

2017-01-01

A relatively high level of stratification (qualitatively: lack of homogeneity) is one of the main advantages of partially premixed combustion over the homogeneous charge compression ignition concept. Stratification can smooth the heat release rate

Predictive features of CT for risk stratifications in patients with primary gastrointestinal stromal tumour

International Nuclear Information System (INIS)

Zhou, Cuiping; Zhang, Xiang; Duan, Xiaohui; Hu, Huijun; Wang, Dongye; Shen, Jun

2016-01-01

To determine the predictive CT imaging features for risk stratifications in patients with primary gastrointestinal stromal tumours (GISTs). One hundred and twenty-nine patients with histologically confirmed primary GISTs (diameter >2 cm) were enrolled. CT imaging features were reviewed. Tumour risk stratifications were determined according to the 2008 NIH criteria where GISTs were classified into four categories according to the tumour size, location, mitosis count, and tumour rupture. The association between risk stratifications and CT features was analyzed using univariate analysis, followed by multinomial logistic regression and receiver operating characteristic (ROC) curve analysis. CT imaging features including tumour margin, size, shape, tumour growth pattern, direct organ invasion, necrosis, enlarged vessels feeding or draining the mass (EVFDM), lymphadenopathy, and contrast enhancement pattern were associated with the risk stratifications, as determined by univariate analysis (P < 0.05). Only lesion size, growth pattern and EVFDM remained independent risk factors in multinomial logistic regression analysis (OR = 3.480-100.384). ROC curve analysis showed that the area under curve of the obtained multinomial logistic regression model was 0.806 (95 % CI: 0.727-0.885). CT features including lesion size, tumour growth pattern, and EVFDM were predictors of the risk stratifications for GIST. (orig.)

ASSESSMENT OF STELLAR STRATIFICATION IN THREE YOUNG STAR CLUSTERS IN THE LARGE MAGELLANIC CLOUD

International Nuclear Information System (INIS)

Gouliermis, Dimitrios A.; Rochau, Boyke; Mackey, Dougal; Xin Yu

2010-01-01

We present a comprehensive study of stellar stratification in young star clusters in the Large Magellanic Cloud (LMC). We apply our recently developed effective radius method for the assessment of stellar stratification on imaging data obtained with the Advanced Camera for Surveys of three young LMC clusters to characterize the phenomenon and develop a comparative scheme for its assessment in such clusters. The clusters of our sample, NGC 1983, NGC 2002, and NGC 2010, are selected on the basis of their youthfulness, and their variety in appearance, structure, stellar content, and surrounding stellar ambient. Our photometry is complete for magnitudes down to m 814 ≅ 23 mag, allowing the calculation of the structural parameters of the clusters, the estimation of their ages, and the determination of their stellar content. Our study shows that each cluster in our sample demonstrates stellar stratification in a quite different manner and at different degree from the others. Specifically, NGC 1983 shows partial segregation, with the effective radius increasing with fainter magnitudes only for the faintest stars of the cluster. Our method on NGC 2002 provides evidence of strong stellar stratification for both bright and faint stars; the cluster demonstrates the phenomenon with the highest degree in the sample. Finally, NGC 2010 is not segregated, as its bright stellar content is not centrally concentrated, the relation of effective radius to magnitude for stars of intermediate brightness is rather flat, and we find no evidence of stratification for its faintest stars. For the parameterization of the phenomenon of stellar stratification and its quantitative comparison among these clusters, we propose the slope derived from the change in the effective radius over the corresponding magnitude range as indicative parameter of the degree of stratification in the clusters. A positive value of this slope indicates mass segregation in the cluster, while a negative or zero value

Stratification and salt-wedge in the Seomjin river estuary under the idealized tidal influence

Science.gov (United States)

Hwang, Jin Hwan; Jang, Dongmin; Kim, Yong Hoon

2017-12-01

Advection, straining, and vertical mixing play primary roles in the process of estuarine stratification. Estuaries can be classified as salt-wedge, partially-mixed or well-mixed depending on the vertical density structure determined by the balancing of advection, mixing and straining. In particular, straining plays a major role in the stratification of the estuarine water body along the estuarine channel. Also, the behavior of a salt wedge with a halocline shape in a stratified channel can be controlled by the competition between straining and mixing induced by buoyancy from the riverine source and tidal forcing. The present study uses Finite Volume Coastal Ocean Model (FVCOM) to show that straining and vertical mixing play major roles in controlling along-channel flow and stratification structures in the Seomjin river estuary (SRE) under idealized conditions. The Potential Energy Anomaly (PEA) dynamic equation quantifies the governing processes thereby enabling the determination of the stratification type. By comparing terms in the equation, we examined how the relative strengths of straining and mixing alter the stratification types in the SRE due to changes in river discharge and the depth resulting from dredging activities. SRE under idealized tidal forcing tends to be partially-mixed based on an analysis of the balance between terms and the vertical structure of salinity, and the morphological and hydrological change in SRE results in the shift of stratification type. While the depth affects the mixing, the freshwater discharge mainly controls the straining, and the balance between mixing and straining determines the final state of the stratification in an estuarine channel. As a result, the development and location of a salt wedge along the channel in a partially mixed and highly stratified condition is also determined by the ratio of straining to mixing. Finally, our findings confirm that the contributions of mixing and straining can be assessed by using the

Schematic Harder–Narasimhan stratification for families of principal ...

Indian Academy of Sciences (India)

Home; Journals; Proceedings – Mathematical Sciences; Volume 124; Issue 3. Schematic Harder–Narasimhan Stratification for Families of Principal Bundles ... Author Affiliations. Sudarshan Gurjar1 Nitin Nitsure1. School of Mathematics, Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400 005, India ...

Molecularly engineered graphene surfaces for sensing applications: A review

International Nuclear Information System (INIS)

Liu, Jingquan; Liu, Zhen; Barrow, Colin J.; Yang, Wenrong

2015-01-01

Highlights: • The importance of surface chemistry of graphene materials is clearly described. • We discuss molecularly engineered graphene surfaces for sensing applications. • We describe the latest developments of these materials for sensing technology. - Abstract: Graphene is scientifically and commercially important because of its unique molecular structure which is monoatomic in thickness, rigorously two-dimensional and highly conjugated. Consequently, graphene exhibits exceptional electrical, optical, thermal and mechanical properties. Herein, we critically discuss the surface modification of graphene, the specific advantages that graphene-based materials can provide over other materials in sensor research and their related chemical and electrochemical properties. Furthermore, we describe the latest developments in the use of these materials for sensing technology, including chemical sensors and biosensors and their applications in security, environmental safety and diseases detection and diagnosis

Molecularly engineered graphene surfaces for sensing applications: A review

Energy Technology Data Exchange (ETDEWEB)

Liu, Jingquan, E-mail: jliu@qdu.edu.cn [College of Chemical Science and Engineering, Laboratory of Fiber Materials and Modern Textile, The Growing Base for State Key Laboratory, Qingdao University, Qingdao (China); Liu, Zhen; Barrow, Colin J. [Centre for Chemistry and Biotechnology, Deakin University, Geelong, VIC 3217 (Australia); Yang, Wenrong, E-mail: wenrong.yang@deakin.edu.au [Centre for Chemistry and Biotechnology, Deakin University, Geelong, VIC 3217 (Australia)

2015-02-15

Highlights: • The importance of surface chemistry of graphene materials is clearly described. • We discuss molecularly engineered graphene surfaces for sensing applications. • We describe the latest developments of these materials for sensing technology. - Abstract: Graphene is scientifically and commercially important because of its unique molecular structure which is monoatomic in thickness, rigorously two-dimensional and highly conjugated. Consequently, graphene exhibits exceptional electrical, optical, thermal and mechanical properties. Herein, we critically discuss the surface modification of graphene, the specific advantages that graphene-based materials can provide over other materials in sensor research and their related chemical and electrochemical properties. Furthermore, we describe the latest developments in the use of these materials for sensing technology, including chemical sensors and biosensors and their applications in security, environmental safety and diseases detection and diagnosis.

Personalizing Chinese medicine by integrating molecular features of diseases and herb ingredient information: application to acute myeloid leukemia.

Science.gov (United States)

Huang, Lin; Li, Haichang; Xie, Duoli; Shi, Tieliu; Wen, Chengping

2017-06-27

Traditional Chinese Medicine (TCM) has been widely used as a complementary medicine in Acute Myeloid Leukemia (AML) treatment. In this study, we proposed a new classification of Chinese Medicines (CMs) by integrating the latest discoveries in disease molecular mechanisms and traditional medicine theory. We screened out a set of chemical compounds on basis of AML differential expression genes and chemical-protein interactions and then mapped them to Traditional Chinese Medicine Integrated Database. 415 CMs contain those compounds and they were categorized into 8 groups according to the Traditional Chinese Pharmacology. Pathway analysis and synthetic lethality gene pairs were applied to analyze the dissimilarity, generality and intergroup relations of different groups. We defined hub CM pairs and alternative CM groups based on the analysis result and finally proposed a formula to form an effective anti-AML prescription which combined the hub CM pairs with alternative CMs according to patients' molecular features. Our method of formulating CMs based on patients' stratification provides novel insights into the new usage of conventional CMs and will promote TCM modernization.

Combustion Mode Design with High Efficiency and Low Emissions Controlled by Mixtures Stratification and Fuel Reactivity

Directory of Open Access Journals (Sweden)

Hu eWang

2015-08-01

Full Text Available This paper presents a review on the combustion mode design with high efficiency and low emissions controlled by fuel reactivity and mixture stratification that have been conducted in the authors’ group, including the charge reactivity controlled homogeneous charge compression ignition (HCCI combustion, stratification controlled premixed charge compression ignition (PCCI combustion, and dual-fuel combustion concepts controlled by both fuel reactivity and mixture stratification. The review starts with the charge reactivity controlled HCCI combustion, and the works on HCCI fuelled with both high cetane number fuels, such as DME and n-heptane, and high octane number fuels, such as methanol, natural gas, gasoline and mixtures of gasoline/alcohols, are reviewed and discussed. Since single fuel cannot meet the reactivity requirements under different loads to control the combustion process, the studies related to concentration stratification and dual-fuel charge reactivity controlled HCCI combustion are then presented, which have been shown to have the potential to achieve effective combustion control. The efforts of using both mixture and thermal stratifications to achieve the auto-ignition and combustion control are also discussed. Thereafter, both charge reactivity and mixture stratification are then applied to control the combustion process. The potential and capability of thermal-atmosphere controlled compound combustion mode and dual-fuel reactivity controlled compression ignition (RCCI/highly premixed charge combustion (HPCC mode to achieve clean and high efficiency combustion are then presented and discussed. Based on these results and discussions, combustion mode design with high efficiency and low emissions controlled by fuel reactivity and mixtures stratification in the whole operating range is proposed.

PPOOLEX experiments on stratification and mixing in the wet well pool

International Nuclear Information System (INIS)

Laine, J.; Puustinen, M.; Raesaenen, A.; Tanskanen, V.

2011-03-01

This report summarizes the results of the thermal stratification and mixing experiments carried out in 2010 with the scaled down, two compartment PPOOLEX test facility designed and constructed at LUT. Steam was blown into the thermally insulated dry well compartment and from there through the DN200 vertical blowdown pipe to the condensation pool filled with sub-cooled water. The main purpose of the experiment series was to generate verification data for evaluating the capability of GOTHIC and APROS codes to predict stratification and mixing phenomena. Another objective was to test the sound velocity measurement system. Altogether five experiments were carried out. The experiments consisted of a small steam flow rate stratification period and of a mixing period with continuously or stepwise increasing flow rate. The dry well structures were heated up to the level of approximately 90 deg. C before the actual experiments. The initial water bulk temperature was 20 deg. C. When the steam flow rate was low enough (typically ∼100-150 g/s) temperatures below the blowdown pipe outlet remained constant while increasing heat-up occurred towards the pool surface layers indicating strong thermal stratification of the wet well pool water. During the stratification period the highest measured temperature difference between pool bottom and surface was approximately 40 deg. C. During the mixing period total mixing of the pool volume was not achieved in any of the experiments. The bottom layers heated up significantly but never reached the same temperature as the topmost layers. The lowest measured temperature difference between the pool bottom and surface was 7-8 deg. C. According to the test results, it seems that a small void fraction doesn't have an effect on the speed of sound in water and that the acquired sound velocity measurement system cannot be used for the estimation of void fraction in the wet well water pool. However, more tests on this issue have to be executed

PPOOLEX experiments on stratification and mixing in the wet well pool

Energy Technology Data Exchange (ETDEWEB)

Laine, J.; Puustinen, M.; Raesaenen, A.; Tanskanen, V. (Lappeenranta Univ. of Technology, Nuclear Safety Research Unit (Finland))

2011-03-15

This report summarizes the results of the thermal stratification and mixing experiments carried out in 2010 with the scaled down, two compartment PPOOLEX test facility designed and constructed at LUT. Steam was blown into the thermally insulated dry well compartment and from there through the DN200 vertical blowdown pipe to the condensation pool filled with sub-cooled water. The main purpose of the experiment series was to generate verification data for evaluating the capability of GOTHIC and APROS codes to predict stratification and mixing phenomena. Another objective was to test the sound velocity measurement system. Altogether five experiments were carried out. The experiments consisted of a small steam flow rate stratification period and of a mixing period with continuously or stepwise increasing flow rate. The dry well structures were heated up to the level of approximately 90 deg. C before the actual experiments. The initial water bulk temperature was 20 deg. C. When the steam flow rate was low enough (typically approx100-150 g/s) temperatures below the blowdown pipe outlet remained constant while increasing heat-up occurred towards the pool surface layers indicating strong thermal stratification of the wet well pool water. During the stratification period the highest measured temperature difference between pool bottom and surface was approximately 40 deg. C. During the mixing period total mixing of the pool volume was not achieved in any of the experiments. The bottom layers heated up significantly but never reached the same temperature as the topmost layers. The lowest measured temperature difference between the pool bottom and surface was 7-8 deg. C. According to the test results, it seems that a small void fraction doesn't have an effect on the speed of sound in water and that the acquired sound velocity measurement system cannot be used for the estimation of void fraction in the wet well water pool. However, more tests on this issue have to be

Proceedings of the specialists meeting on experience with thermal fatigue in LWR piping caused by mixing and stratification

International Nuclear Information System (INIS)

1998-01-01

This specialists meeting on experience with thermal fatigue in LWR piping caused by mixing and stratification, was held in June 1998 in Paris. It included five sessions. Session 1: operating experience (7 papers): Historical perspective; EDF experience with local thermohydraulic phenomena in PWRs: impacts and strategies; Thermal fatigue in safety injection lines of French PWRs: technical problems, regulatory requirements, concerns about other areas; US NRC Regulatory perspective on unanticipated thermal fatigue in LWR piping; Failure to the Residual Heat Removal system suction line pipe in Genkai unit 1 caused by thermal stratification cycling; Emergency Core Cooling System pipe crack incident at Tihange unit 1; Two leakages induced by thermal stratification at the Loviisa power plant). Session 2: thermal hydraulic phenomena (5 papers): Thermal stratification in small pipes with respect to fatigue effects and so called 'Banana effect'; Thermal stratification in the surge line of the Korean next generation reactor; Thermal stratification in horizontal pipes investigated in UPTF-TRAM and HDR facilities; Research on thermal stratification in un-isolable piping of reactor pressure boundary; Thermal mixing phenomena in piping systems: 3D numerical simulation and design considerations. Session 3: response of material and structure (5 papers): Fatigue induced by thermal stratification, Results of tests and calculations of the COUFAST model; Laboratory simulation of thermal fatigue cracking as a basis for verifying life models; Thermo-mechanical analysis methods for the conception and the follow up of components submitted to thermal stratification transients; Piping analysis methods of a PWR surge line for stratified flow; The thermal stratification effect on surge lines, The VVER estimation. Session 4: monitoring aspects (4 papers): Determination of the thermal loadings affecting the auxiliary lines of the reactor coolant system in French PWR plants; Expected and

Modeling of condensation, stratification, and mixing phenomena in a pool of water

Energy Technology Data Exchange (ETDEWEB)

Li, H.; Kudinov, P.; Villanueva, W. (Royal Institute of Technology (KTH). Div. of Nuclear Power Safety, Stockholm (Sweden))

2010-12-15

) propose necessary improvements in GOTHIC sub-grid scale modeling. The study performed on thermal stratification in a water pool indicates that GOTHIC CFD-like model is fit for reactor applications in complex fluidphysics scenarios that avoids both over-simplification (as in single lumpedparameter model) and over-complication (as in CFD models). However, simulation of direct steam injection into a subcooled pool cannot be predicted reliably with the existing models. Thus we develop 'effective heat source' and 'effective momentum' approaches, and provide feasibility study for the prediction of thermal stratification and mixing in a BWR pressure suppression pool. The results are encouraging and further activity on the development and implementation of the proposed models in GOTHIC is currently underway. (Author)

Water Stratification Raster Images for the Gulf of Maine

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This geodatabase contains seasonal water stratification raster images for the Gulf of Maine. They were created by interpolating water density (sigma t) values at 0...

Application of atomic absorption in molecular analysis (spectrophotometry)

International Nuclear Information System (INIS)

Baliza, S.V.; Soledade, L.E.B.

1981-01-01

The apparatus of atomic absorption has been considered by all the experts in chemical analysis as one of the most important equipments in actual utilization in such field. Among its several applications one should emphasize direct and indirect metals analyses using flame, graphite furnace, cold vapor generator,... Besides such known applications, the authors have developed at the R and D Center of CSN a patent pendent method for the utilization of such equipment for molecular analysis, in substitution of a sophisticated and specific apparatus. (Author) [pt

Statistical Support for Analysis of the Social Stratification and Economic Inequality of the Country’s Population

Directory of Open Access Journals (Sweden)

Aksyonova Irina V.

2017-12-01

Full Text Available The aim of the article is to summarize the theoretical and methodological as well as information and analytical support for statistical research of economic and social stratification in society and conduct an analysis of the differentiation of the population of Ukraine in terms of the economic component of social inequality. The theoretical and methodological level of the research is studied, and criteria for social stratification and inequalities in society, systems, models and theories of social stratification of the population are singled out. The indicators of social and economic statistics regarding the differentiation of the population by income level are considered as the research tools. As a result of the analysis it was concluded that the economic inequality of the population leads to changes in the social structure, which requires formation of a new social stratification of society. The basis of social stratification is indicators of the population well-being, which require a comprehensive study. Prospects for further research in this area are the analysis of the components of economic inequality that determine and influence the social stratification of the population of the country, the formation of the middle class, and the study of the components of the human development index as a cross-currency indicator of the socio-economic inequality of the population.

Tidal asymmetries of velocity and stratification over a bathymetric depression in a tropical inlet

Science.gov (United States)

Waterhouse, Amy F.; Valle-Levinson, Arnoldo; Morales Pérez, Rubén A.

2012-10-01

Observations of current velocity, sea surface elevation and vertical profiles of density were obtained in a tropical inlet to determine the effect of a bathymetric depression (hollow) on the tidal flows. Surveys measuring velocity profiles were conducted over a diurnal tidal cycle with mixed spring tides during dry and wet seasons. Depth-averaged tidal velocities during ebb and flood tides behaved according to Bernoulli dynamics, as expected. The dynamic balance of depth-averaged quantities in the along-channel direction was governed by along-channel advection and pressure gradients with baroclinic pressure gradients only being important during the wet season. The vertical structure of the along-channel flow during flood tides exhibited a mid-depth maximum with lateral shear enhanced during the dry season as a result of decreased vertical stratification. During ebb tides, along-channel velocities in the vicinity of the hollow were vertically sheared with a weak return flow at depth due to choking of the flow on the seaward slope of the hollow. The potential energy anomaly, a measure of the amount of energy required to fully mix the water column, showed two peaks in stratification associated with ebb tide and a third peak occurring at the beginning of flood. After the first mid-ebb peak in stratification, ebb flows were constricted on the seaward slope of the hollow resulting in a bottom return flow. The sinking of surface waters and enhanced mixing on the seaward slope of the hollow reduced the potential energy anomaly after maximum ebb. The third peak in stratification during early flood occurred as a result of denser water entering the inlet at mid-depth. This dense water mixed with ambient deep waters increasing the stratification. Lateral shear in the along-channel flow across the hollow allowed trapping of less dense water in the surface layers further increasing stratification.

Prognostic value of Ki-67 index in adult medulloblastoma after accounting for molecular subgroup: a retrospective clinical and molecular analysis.

Science.gov (United States)

Zhao, Fu; Zhang, Jing; Li, Peng; Zhou, Qiangyi; Zhang, Shun; Zhao, Chi; Wang, Bo; Yang, Zhijun; Li, Chunde; Liu, Pinan

2018-04-23

Medulloblastoma (MB) is a rare primary brain tumor in adults. We previously evaluated that combining both clinical and molecular classification could improve current risk stratification for adult MB. In this study, we aimed to identify the prognostic value of Ki-67 index in adult MB. Ki-67 index of 51 primary adult MBs was reassessed using a computer-based image analysis (Image-Pro Plus). All patients were followed up ranging from 12 months up to 15 years. Gene expression profiling and immunochemistry were used to establish the molecular subgroups in adult MB. Combined risk stratification models were designed based on clinical characteristics, molecular classification and Ki-67 index, and identified by multivariable Cox proportional hazards analysis. In our cohort, the mean Ki-67 value was 30.0 ± 11.3% (range 6.56-63.55%). The average Ki-67 value was significantly higher in LC/AMB than in CMB and DNMB (P = .001). Among three molecular subgroups, Group 4-tumors had the highest average Ki-67 value compared with WNT- and SHH-tumors (P = .004). Patients with Ki-67 index large than 30% displayed poorer overall survival (OS) and progression free survival (PFS) than those with Ki-67 less than 30% (OS: P = .001; PFS: P = .006). Ki-67 index (i.e. > 30%, < 30%) was identified as an independent significant prognostic factor (OS: P = .017; PFS: P = .024) by using multivariate Cox proportional hazards model. In conclusion, Ki-67 index can be considered as a valuable independent prognostic biomarker for adult patients with MB.

Combustion Stratification for Naphtha from CI Combustion to PPC

KAUST Repository

Vallinayagam, R.; Vedharaj, S.; An, Yanzhao; Dawood, Alaaeldin; Izadi Najafabadi, Mohammad; Somers, Bart; Johansson, Bengt

2017-01-01

This study demonstrates the combustion stratification from conventional compression ignition (CI) combustion to partially premixed combustion (PPC). Experiments are performed in an optical CI engine at a speed of 1200 rpm for diesel and naphtha (RON

Molecular simulation studies on thermophysical properties with application to working fluids

CERN Document Server

Raabe, Gabriele

2017-01-01

This book discusses the fundamentals of molecular simulation, starting with the basics of statistical mechanics and providing introductions to Monte Carlo and molecular dynamics simulation techniques. It also offers an overview of force-field models for molecular simulations and their parameterization, with a discussion of specific aspects. The book then summarizes the available know-how for analyzing molecular simulation outputs to derive information on thermophysical and structural properties. Both the force-field modeling and the analysis of simulation outputs are illustrated by various examples. Simulation studies on recently introduced HFO compounds as working fluids for different technical applications demonstrate the value of molecular simulations in providing predictions for poorly understood compounds and gaining a molecular-level understanding of their properties. This book will prove a valuable resource to researchers and students alike.

Ion species stratification within strong shocks in two-ion plasmas

Science.gov (United States)

Keenan, Brett D.; Simakov, Andrei N.; Taitano, William T.; Chacón, Luis

2018-03-01

Strong collisional shocks in multi-ion plasmas are featured in many environments, with Inertial Confinement Fusion (ICF) experiments being one prominent example. Recent work [Keenan et al., Phys. Rev. E 96, 053203 (2017)] answered in detail a number of outstanding questions concerning the kinetic structure of steady-state, planar plasma shocks, e.g., the shock width scaling by the Mach number, M. However, it did not discuss shock-driven ion-species stratification (e.g., relative concentration modification and temperature separation). These are important effects since many recent ICF experiments have evaded explanation by standard, single-fluid, radiation-hydrodynamic (rad-hydro) numerical simulations, and shock-driven fuel stratification likely contributes to this discrepancy. Employing the state-of-the-art Vlasov-Fokker-Planck code, iFP, along with multi-ion hydro simulations and semi-analytics, we quantify the ion stratification by planar shocks with the arbitrary Mach number and the relative species concentration for two-ion plasmas in terms of ion mass and charge ratios. In particular, for strong shocks, we find that the structure of the ion temperature separation has a nearly universal character across ion mass and charge ratios. Additionally, we find that the shock fronts are enriched with the lighter ion species and the enrichment scales as M4 for M ≫ 1.

The prostate cancer risk stratification (ProCaRS) project: Recursive partitioning risk stratification analysis

International Nuclear Information System (INIS)

Rodrigues, George; Lukka, Himu; Warde, Padraig; Brundage, Michael; Souhami, Luis; Crook, Juanita; Cury, Fabio; Catton, Charles; Mok, Gary; Martin, Andre-Guy; Vigneault, Eric; Morris, Jim; Warner, Andrew; Gonzalez Maldonado, Sandra; Pickles, Tom

2013-01-01

Background: The Genitourinary Radiation Oncologists of Canada (GUROC) published a three-group risk stratification (RS) system to assist prostate cancer decision-making in 2001. The objective of this project is to use the ProCaRS database to statistically model the predictive accuracy and clinical utility of a proposed new multi-group RS schema. Methods: The RS analyses utilized the ProCaRS database that consists of 7974 patients from four Canadian institutions. Recursive partitioning analysis (RPA) was utilized to explore the sub-stratification of groups defined by the existing three-group GUROC scheme. 10-fold cross-validated C-indices and the Net Reclassification Index were both used to assess multivariable models and compare the predictive accuracy of existing and proposed RS systems, respectively. Results: The recursive partitioning analysis has suggested that the existing GUROC classification system could be altered to accommodate as many as six separate and statistical unique groups based on differences in BFFS (C-index 0.67 and AUC 0.70). GUROC low-risk patients would be divided into new favorable-low and low-risk groups based on PSA ⩽6 and PSA >6. GUROC intermediate-risk patients can be subclassified into low-intermediate and high-intermediate groups. GUROC high-intermediate-risk is defined as existing GUROC intermediate-risk with PSA >=10 AND either T2b/c disease or T1T2a disease with Gleason 7. GUROC high-risk patients would be subclassified into an additional extreme-risk group (GUROC high-risk AND (positive cores ⩾87.5% OR PSA >30). Conclusions: Proposed RS subcategories have been identified by a RPA of the ProCaRS database

A method to determine stratification efficiency of thermal energy storage processes independently from storage heat losses

DEFF Research Database (Denmark)

Haller, M.Y.; Yazdanshenas, Eshagh; Andersen, Elsa

2010-01-01

process is in agreement with the first law of thermodynamics. A comparison of the stratification efficiencies obtained from experimental results of charging, standby, and discharging processes gives meaningful insights into the different mixing behaviors of a storage tank that is charged and discharged......A new method for the calculation of a stratification efficiency of thermal energy storages based on the second law of thermodynamics is presented. The biasing influence of heat losses is studied theoretically and experimentally. Theoretically, it does not make a difference if the stratification...

Models of the plasma corona formation and stratification of exploding micro-wires

International Nuclear Information System (INIS)

Volkov, N.B.; Sarkisov, G.S.; Struve, K.W.; McDaniel, D.H.

2005-01-01

There are proposed the models pf plasma corona formation and stratification of a gas-plasma core of exploding micro-wire. The opportunity of use for the description of physical processes in a formed plasma corona of an electronic magnetohydrodynamics is generalized in view of change of particle number as a result of evaporation, ionization and a leaving of electrons on a wire surface. Necessity of the account of influence of a hot plasma corona on stratification of a gas-plasma core was grounded [ru

Seed flotation and germination of salt marsh plants: The effects of stratification, salinity, and/or inundation regime

Science.gov (United States)

Elsey-Quirk, T.; Middleton, B.A.; Proffitt, C.E.

2009-01-01

We examined the effects of cold stratification and salinity on seed flotation of eight salt marsh species. Four of the eight species were tested for germination success under different stratification, salinity, and flooding conditions. Species were separated into two groups, four species received wet stratification and four dry stratification and fresh seeds of all species were tested for flotation and germination. Fresh seeds of seven out of eight species had flotation times independent of salinity, six of which had average flotation times of at least 50 d. Seeds of Spartina alterniflora and Spartina patens had the shortest flotation times, averaging 24 and 26 d, respectively. Following wet stratification, the flotation time of S. alterniflora seeds in higher salinity water (15 and 36 ppt) was reduced by over 75% and germination declined by more than 90%. Wet stratification reduced the flotation time of Distichlis spicata seeds in fresh water but increased seed germination from 2 to 16% in a fluctuating inundation regime. Fresh seeds of Iva frutescens and S. alternflora were capable of germination and therefore are non-dormant during dispersal. Fresh seeds of I. frutescens had similar germination to dry stratified seeds ranging 25-30%. Salinity reduced seed germination for all species except for S. alterniflora. A fluctuating inundation regime was important for seed germination of the low marsh species and for germination following cold stratification. The conditions that resulted in seeds sinking faster were similar to the conditions that resulted in higher germination for two of four species. ?? 2009 Elsevier B.V.

The rise of a novel classification system for endometrial carcinoma; integration of molecular subclasses.

Science.gov (United States)

McAlpine, Jessica; Leon-Castillo, Alicia; Bosse, Tjalling

2018-04-01

Endometrial cancer is a clinically heterogeneous disease and it is becoming increasingly clear that this heterogeneity may be a function of the diversity of the underlying molecular alterations. Recent large-scale genomic studies have revealed that endometrial cancer can be divided into at least four distinct molecular subtypes, with well-described underlying genomic aberrations. These subtypes can be reliably delineated and carry significant prognostic as well as predictive information; embracing and incorporating them into clinical practice is thus attractive. The road towards the integration of molecular features into current classification systems is not without obstacles. Collaborative studies engaging research teams from across the world are working to define pragmatic assays, improve risk stratification systems by combining molecular features and traditional clinicopathological parameters, and determine how molecular classification can be optimally utilized to direct patient care. Pathologists and clinicians caring for women with endometrial cancer need to engage with and understand the possibilities and limitations of this new approach, because integration of molecular classification of endometrial cancers is anticipated to become an essential part of gynaecological pathology practice. This review will describe the challenges in current systems of endometrial carcinoma classification, the evolution of new molecular technologies that define prognostically distinct molecular subtypes, and potential applications of molecular classification as a step towards precision medicine and refining care for individuals with the most common gynaecological cancer in the developed world. Copyright © 2018 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd. Copyright © 2018 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Mixed convection and stratification phenomena in a heavy liquid metal pool

Energy Technology Data Exchange (ETDEWEB)

Tarantino, Mariano, E-mail: mariano.tarantino@enea.it [Italian National Agency for New Technologies, Energy and Sustainable Economic Development, C.R. ENEA Brasimone (Italy); Martelli, Daniele; Barone, Gianluca [Dipartimento di Ingegneria Civile e Industriale, University of Pisa, Largo Lucio Lazzarino, 1-56100 Pisa Italy (Italy); Di Piazza, Ivan [Italian National Agency for New Technologies, Energy and Sustainable Economic Development, C.R. ENEA Brasimone (Italy); Forgione, Nicola [Dipartimento di Ingegneria Civile e Industriale, University of Pisa, Largo Lucio Lazzarino, 1-56100 Pisa Italy (Italy)

2015-05-15

Highlights: • Results related to experiments reproducing PLOHS + LOF accident in CIRCE pool facility. • Vertical thermal stratification in large HLM pool. • Transition from forced to natural circulation in HLM pool under DHR conditions. • Heat transfer coefficient measurement in HLM pin bundle. • Nusselt numbers calculations and comparison with correlations. - Abstract: This work deals with an analysis of the first experimental series of tests performed to investigate mixed convection and stratification phenomena in CIRCE HLM large pool. In particular, the tests concern the transition from nominal flow to natural circulation regime, typical of decay heat removal (DHR) regime. To this purpose the CIRCE pool facility has been updated to host a suitable test section in order to reproduce the thermal-hydraulic behaviour of a HLM pool-type reactor. The test section basically consists of an electrical bundle (FPS) made up of 37 pins arranged in a hexagonal wrapped lattice with a pitch diameter ratio of 1.8. Along the FPS active length, three sections were instrumented to monitor the heat transfer coefficient along the bundle as well as the cladding temperatures at different ranks of the sub-channels. This paper reports the experimental data as well as a preliminary analysis and discussion of the results, focusing on the most relevant tests of the campaign, namely Test I (48 h) and Test II (97 h). Temperatures along three sections of the FPS and at inlet and outlet sections of the main components were reported and the Nusselt number in the FPS sub-channels was investigated together with the void fraction in the riser. Concerning the investigation of in-pool thermal stratification phenomena, the temperatures in the whole LBE pool were monitored at different elevations and radial locations. The analysis of experimental data obtained from Tests I and II underline the occurrence of thermal stratification phenomena in the region placed between the outlet sections of

Application of Deep Learning in Automated Analysis of Molecular Images in Cancer: A Survey

Science.gov (United States)

Xue, Yong; Chen, Shihui; Liu, Yong

2017-01-01

Molecular imaging enables the visualization and quantitative analysis of the alterations of biological procedures at molecular and/or cellular level, which is of great significance for early detection of cancer. In recent years, deep leaning has been widely used in medical imaging analysis, as it overcomes the limitations of visual assessment and traditional machine learning techniques by extracting hierarchical features with powerful representation capability. Research on cancer molecular images using deep learning techniques is also increasing dynamically. Hence, in this paper, we review the applications of deep learning in molecular imaging in terms of tumor lesion segmentation, tumor classification, and survival prediction. We also outline some future directions in which researchers may develop more powerful deep learning models for better performance in the applications in cancer molecular imaging. PMID:29114182

Numerical Investigation on Effects of Assigned EGR Stratification on a Heavy Duty Diesel Engine with Two-Stage Fuel Injection

Directory of Open Access Journals (Sweden)

Zhaojie Shen

2018-02-01

Full Text Available External exhaust gas recirculation (EGR stratification in diesel engines contributes to reduction of toxic emissions. Weak EGR stratification lies in that strong turbulence and mixing between EGR and intake air by current introduction strategies of EGR. For understanding of ideal EGR stratification combustion, EGR was assigned radically at −30 °CA after top dead center (ATDC to organize strong EGR stratification using computational fluid dynamics (CFD. The effects of assigned EGR stratification on diesel performance and emissions are discussed in this paper. Although nitric oxides (NOx and soot emissions are both reduced by means of EGR stratification compared to uniform EGR, the trade-off between NOx and soot still exists under the condition of arranged EGR stratification with different fuel injection strategies. A deterioration of soot emissions was observed when the interval between main and post fuel injection increased, while NO emissions increased first then reduced. The case with a 4 °CA interval between main and post fuel injection is suitable for acceptable NO and soot emissions. Starting the main fuel injection too early and too late is not acceptable, which results in high NO emissions and high soot emissions respectively. The start of the main fuel injection −10 °CA ATDC is suitable.

Analysis of stratification effects on mechanical integrity of pressurizer surge line

International Nuclear Information System (INIS)

Thomas-Solgadi, E.; Taupin, P.; Ensel, C.

1992-01-01

Unexpected thermal movements in pressurizer surge lines have been reported by several PWR operating utilities. Sometimes gaps between pipe and pipe whip restraints can become closed and plastic deformations could result. Moreover these movements, which have not been considered at conception, can induce additional stresses, and design limits on fatigue and stresses may be exceeded. These piping movements are caused by thermal stratification phenomenon in the horizontal part of the surge line (difference of temperature between hot leg and pressurizer varying from 30 C to above 160 C). To assess the mechanical consequences of this 3-dimensional phenomenon, FRAMATOME has developed a computer program using simplified models (1 and 2-dimensional). This method integrates past investigations on thermal-hydraulic variation of the stratification based on plant monitoring programs carried out by FRAMATOME since 1981, and based also on thermal-hydraulic tests and thermal-hydraulic computer code results. The methodology developed by FRAMATOME permits the following calculations: movements of the line in the elastic and plastic domains; stresses (Mises criterion -- calculations in compliance with ASME or RCC-M codes); usage factors in different components (elbows, welds, ...); crack propagation taking into account stratification and plastic shakedown

Effects of cold stratification, sulphuric acid, submersion in hot and ...

African Journals Online (AJOL)

Effects of cold stratification, sulphuric acid, submersion in hot and tap water pretreatments in the greenhouse and open field conditions on germination of bladder-Senna ( Colutea armena Boiss. and Huet.) seeds.

Risk stratification in myelodysplastic syndromes: is there a role for gene expression profiling?

Science.gov (United States)

Zeidan, Amer M; Prebet, Thomas; Saad Aldin, Ehab; Gore, Steven David

2014-04-01

Evaluation of: Pellagatti A, Benner A, Mills KI et al. Identification of gene expression-based prognostic markers in the hematopoietic stem cells of patients with myelodysplastic syndromes. J. Clin. Oncol. 31(28), 3557-3564 (2013). Patients with myelodysplastic syndromes (MDS) exhibit wide heterogeneity in clinical outcomes making accurate risk-stratification an integral part of the risk-adaptive management paradigm. Current prognostic schemes for MDS rely on clinicopathological parameters. Despite the increasing knowledge of the genetic landscape of MDS and the prognostic impact of many newly discovered molecular aberrations, none to date has been incorporated formally into the major risk models. Efforts are ongoing to use data generated from genome-wide high-throughput techniques to improve the 'individualized' outcome prediction for patients. We here discuss an important paper in which gene expression profiling (GEP) technology was applied to marrow CD34(+) cells from 125 MDS patients to generate and validate a standardized GEP-based prognostic signature.

Roles of endoplasmic reticulum stress and unfolded protein response associated genes in seed stratification and bud endodormancy during chilling accumulation in Prunus persica.

Directory of Open Access Journals (Sweden)

Xi Ling Fu

Full Text Available Dormancy mechanisms in seeds and buds arrest growth until environmental conditions are optimal for development. A genotype-specific period of chilling is usually required to release dormancy, but the underlying molecular mechanisms are still not fully understood. To discover transcriptional pathways associated with dormancy release common to seed stratification and bud endodormancy, we explored the chilling-dependent expression of 11 genes involved in endoplasmic reticulum stress and the unfolded protein response signal pathways. We propose that endoplasmic reticulum stress and the unfolded protein response impact on seed as well as bud germination and development by chilling-dependent mechanisms. The emerging discovery of similarities between seed stratification and bud endodormancy status indicate that these two processes are probably regulated by common endoplasmic reticulum stress and unfolded protein response signalling pathways. Clarification of regulatory pathways common to both seed and bud dormancy may enhance understanding of the mechanisms underlying dormancy and breeding programs may benefit from earlier prediction of chilling requirements for uniform blooming of novel genotypes of deciduous fruit tree species.

Stratification of a cityscape using census and land use variables for inventory of building materials

Science.gov (United States)

Rosenfield, G.H.; Fitzpatrick-Lins, K.; Johnson, T.L.

1987-01-01

A cityscape (or any landscape) can be stratified into environmental units using multiple variables of information. For the purposes of sampling building materials, census and land use variables were used to identify similar strata. In the Metropolitan Statistical Area of a cityscape, the census tract is the smallest unit for which census data are summarized and digitized boundaries are available. For purposes of this analysis, census data on total population, total number of housing units, and number of singleunit dwellings were aggregated into variables of persons per square kilometer and proportion of housing units in single-unit dwellings. The level 2 categories of the U.S. Geological Survey's land use and land cover data base were aggregated into variables of proportion of residential land with buildings, proportion of nonresidential land with buildings, and proportion of open land. The cityscape was stratified, from these variables, into environmental strata of Urban Central Business District, Urban Livelihood Industrial Commercial, Urban Multi-Family Residential, Urban Single Family Residential, Non-Urban Suburbanizing, and Non-Urban Rural. The New England region was chosen as a region with commonality of building materials, and a procedure developed for trial classification of census tracts into one of the strata. Final stratification was performed by discriminant analysis using the trial classification and prior probabilities as weights. The procedure was applied to several cities, and the results analyzed by correlation analysis from a field sample of building materials. The methodology developed for stratification of a cityscape using multiple variables has application to many other types of environmental studies, including forest inventory, hydrologic unit management, waste disposal, transportation studies, and other urban studies. Multivariate analysis techniques have recently been used for urban stratification in England. ?? 1987 Annals of Regional

Molecular alterations and biomarkers in colorectal cancer

Science.gov (United States)

Grady, William M.; Pritchard, Colin C.

2013-01-01

The promise of precision medicine is now a clinical reality. Advances in our understanding of the molecular genetics of colorectal cancer genetics is leading to the development of a variety of biomarkers that are being used as early detection markers, prognostic markers, and markers for predicting treatment responses. This is no more evident than in the recent advances in testing colorectal cancers for specific molecular alterations in order to guide treatment with the monoclonal antibody therapies cetuximab and panitumumab, which target the epidermal growth factor receptor (EGFR). In this review, we update a prior review published in 2010 and describe our current understanding of the molecular pathogenesis of colorectal cancer and how these alterations relate to emerging biomarkers for early detection and risk stratification (diagnostic markers), prognosis (prognostic markers), and the prediction of treatment responses (predictive markers). PMID:24178577

Applications of Cerius2, software of molecular simulation; Aplicaciones de Cerius2, software de simulacion molecular

Energy Technology Data Exchange (ETDEWEB)

Fernandez G, M E; Perez A, M; Gutierrez W, C E [ININ, 52750 La Marquesa, Estado de Mexico (Mexico)

2007-07-01

Most of the investigations have a theoretical sustenance based on molecular simulation. The area of application of molecular simulation is very wide, in the Materials Technology Department assigned to the Applied Sciences Management have been treated problems about metallic nano structures, glasses, interfaces, and molecules, to sustain and to explain some of the experimental results. Energy calculations are carried out to determine minimum energy structures, for later on to carry out calculations of some of their properties; as well as the images simulation of Electron microscopy and X-ray diffraction. (Author)

Alterações moleculares no Mieloma Múltiplo Molecular abnormalities in Multiple Myeloma

Directory of Open Access Journals (Sweden)

Esteban Braggio

2007-03-01

Full Text Available Nos últimos anos tem acontecido uma revolução no conhecimento dos mecanismos moleculares envolvidos na patogênese do mieloma múltiplo, principalmente devido à incorporação de técnicas de citogenética molecular (hibridização in situ fluorescente - FISH e biologia molecular (Reação em cadeia da polimerase - PCR, hibridização genômica comparativa baseada em microarranjos - aCGH e microarranjos de RNA. Estas técnicas permitem estudar as células em interfase e detectar alterações cromossômicas crípticas, superando assim problemas metodológicos relacionados à análise por citogenética convencional. Por outro lado, a complexidade metodológica relacionada com a realização das técnicas de FISH e biologia molecular tem impossibilitado que sejam amplamente utilizadas na rotina laboratorial. Este trabalho tem como objetivo fazer uma revisão das principais vias moleculares alteradas no mieloma múltiplo, o seu valor prognóstico e a sua utilização na estratificação dos pacientes em diferentes grupos de risco. São detalhadas diferentes abordagens metodológicas e uma ênfase especial é dada em relação à importância da análise se restringir exclusivamente às células plasmocitárias. Por último, discutimos uma série de prioridades e estratégias de estudo na rotina laboratorial.In recent years, we have seen an explosion in knowledge on genetic and cytogenetic mechanisms involved in the pathogenesis of multiple myeloma, mainly due to the incorporation of molecular tools in its study (fluorescence in situ hybridization - FISH, Real time PCR and RNA microarrays. These tools have enabled the study of cells in interphase and to detect cryptic chromosomal abnormalities, replacing cytogenetic techniques. The technical complexities associated with the performance of these tests, however, have limited their widespread applicability in routine clinical practice. The aim of this work is to review the present status of our

Applications of the Preclinical Molecular Image in Biomedicine; Aplicaciones de la imagen Molecular Preclínica en Biomedicina

Energy Technology Data Exchange (ETDEWEB)

Delgado, M.; Bascuñana, P.; Fernández de la Rosa, R.; De Cristobal, J.; García-García, L.; Pozo, M. A.

2014-07-01

Molecular imaging is a broad platform, which provides valuable information about physiological and pathophysiological changes in living organisms by non-invasive methods. Depending on the used technique: anatomical, functional metabolic or molecular data could be assessed. Positron Emission Tomography (PET) provides with functional and molecular data, and combined with Computerized Tomography (CT) and Magnetic Resonance (MRI) with the multimodality equipment, it can be exponentially improved. Metabolic pathways and changes on the molecular and cellular level are target in molecular imaging cancer research. Tumour microenvironment, stroma and new vessels can be assessed by PET imaging. Additionally the visualization of functions and monitoring data of provided therapies could be obtained. The aim of the current review is to summarize principles and novel findings in molecular imaging specifically in PET and its application in preclinical cancer research. The theoretical background of techniques and main applications will be highlighted [Spanish] La imagen molecular aporta información muy valiosa, mediante métodos no invasivos, acerca de la fisiología de organismos vivos y sus cambios debidos a patologías. Dependiendo de la técnica utilizada se pueden obtener datos anatómicos, funcionales, metabólicos o moleculares. La Tomografía por Emisión de Positrones (PET) aporta datos metabólicos y moleculares con una alta sensibilidad, y en asociación con la Tomografía Computarizada (TC) o con Resonancia Magnética (RM), con la aparición de los nuevos equipos multimodalidad, las posibilidades de diagnóstico se incrementan exponencialmente. La imagen molecular en investigación oncológica presenta como objetivos principales identificar las diferentes vías metabólicas tumorales y sus cambios a nivel molecular y celular, el comportamiento del microentorno tumoral, aparición de nuevos vasos, estroma, etc. Además, es posible el análisis y cuantificación del

An efficient modeling method for thermal stratification simulation in a BWR suppression pool

Energy Technology Data Exchange (ETDEWEB)

Haihua Zhao; Ling Zou; Hongbin Zhang; Hua Li; Walter Villanueva; Pavel Kudinov

2012-09-01

The suppression pool in a BWR plant not only is the major heat sink within the containment system, but also provides major emergency cooling water for the reactor core. In several accident scenarios, such as LOCA and extended station blackout, thermal stratification tends to form in the pool after the initial rapid venting stage. Accurately predicting the pool stratification phenomenon is important because it affects the peak containment pressure; and the pool temperature distribution also affects the NPSHa (Available Net Positive Suction Head) and therefore the performance of the pump which draws cooling water back to the core. Current safety analysis codes use 0-D lumped parameter methods to calculate the energy and mass balance in the pool and therefore have large uncertainty in prediction of scenarios in which stratification and mixing are important. While 3-D CFD methods can be used to analyze realistic 3D configurations, these methods normally require very fine grid resolution to resolve thin substructures such as jets and wall boundaries, therefore long simulation time. For mixing in stably stratified large enclosures, the BMIX++ code has been developed to implement a highly efficient analysis method for stratification where the ambient fluid volume is represented by 1-D transient partial differential equations and substructures such as free or wall jets are modeled with 1-D integral models. This allows very large reductions in computational effort compared to 3-D CFD modeling. The POOLEX experiments at Finland, which was designed to study phenomena relevant to Nordic design BWR suppression pool including thermal stratification and mixing, are used for validation. GOTHIC lumped parameter models are used to obtain boundary conditions for BMIX++ code and CFD simulations. Comparison between the BMIX++, GOTHIC, and CFD calculations against the POOLEX experimental data is discussed in detail.

The Social Stratification of the German VET System

Science.gov (United States)

Protsch, Paula; Solga, Heike

2016-01-01

Germany is widely known for its vocational education and training (VET) system and its dual apprenticeship system in particular. What is often overlooked, however, is the vertical stratification within the German VET system. This is the focus of this study. Our analysis shows that the VET system, like the German school system, is highly…

Evaluation and verification of thermal stratification models for was

African Journals Online (AJOL)

USER

prediction of the condition of thermal stratification in WSPs under different hydraulic conditions and ... off coefficient. The models are verified with data collected from the full scale waste .... comparing two mathematical models based ..... 2 Comparison of measured and predicted effluent coliform bacteria (N) againsty depth.

Translating clinical research of Molecular Biology into a personalized, multidisciplinary approach of colorectal cancer patients.

Science.gov (United States)

Strambu, V; Garofil, D; Pop, F; Radu, P; Bratucu, M; Popa, F

2014-03-15

Although multimodal treatment has brought important benefit, there is still great heterogeneity regarding the indication and response to chemotherapy in Stage II and III, and individual variations related to both overall survival and toxicity of new therapies in metastatic disease or tumor relapse. Recent research in molecular biology led to the development of a large scale of genetic biomarkers, but their clinical use is not concordant with the high expectations. The Aim of this review is to identify and discuss the molecular markers with proven clinical applicability as prognostic and/or predictive factors in CRC and also to establish a feasible algorithm of molecular testing, as routine practice, in the personalized, multidisciplinary approach of colorectal cancer patients in our country. Despite the revolution that occurred in the field of molecular marker research, only Serum CEA, Immunohistochemical analysis of mismatch repair proteins and PCR testing for KRAS and BRAF mutations have confirmed their clinical utility in the management of colorectal cancer. Their implementation in the current practice should partially resolve some of the controversies related to this heterogenic pathology, in matters of prognosis in different TNM stages, stage II patient risk stratification, diagnosis of hereditary CRC and likelihood of benefit from anti EGFR therapy in metastatic disease. The proposed algorithms of molecular testing are very useful but still imperfect and require further validation and constant optimization.

The 1995 Georges Bank Stratification Study and Moored Array Measurements

National Research Council Canada - National Science Library

Alessi, C

2001-01-01

.... GLOBEC Northwest Atlantic/Georges Bank field program. The GBSS was designed to investigate the physical processes which control the seasonal development of stratification along the southern flank of Georges Bank during spring and summer...

Evolution of South Atlantic density and chemical stratification across the last deglaciation.

Science.gov (United States)

Roberts, Jenny; Gottschalk, Julia; Skinner, Luke C; Peck, Victoria L; Kender, Sev; Elderfield, Henry; Waelbroeck, Claire; Vázquez Riveiros, Natalia; Hodell, David A

2016-01-19

Explanations of the glacial-interglacial variations in atmospheric pCO2 invoke a significant role for the deep ocean in the storage of CO2. Deep-ocean density stratification has been proposed as a mechanism to promote the storage of CO2 in the deep ocean during glacial times. A wealth of proxy data supports the presence of a "chemical divide" between intermediate and deep water in the glacial Atlantic Ocean, which indirectly points to an increase in deep-ocean density stratification. However, direct observational evidence of changes in the primary controls of ocean density stratification, i.e., temperature and salinity, remain scarce. Here, we use Mg/Ca-derived seawater temperature and salinity estimates determined from temperature-corrected δ(18)O measurements on the benthic foraminifer Uvigerina spp. from deep and intermediate water-depth marine sediment cores to reconstruct the changes in density of sub-Antarctic South Atlantic water masses over the last deglaciation (i.e., 22-2 ka before present). We find that a major breakdown in the physical density stratification significantly lags the breakdown of the deep-intermediate chemical divide, as indicated by the chemical tracers of benthic foraminifer δ(13)C and foraminifer/coral (14)C. Our results indicate that chemical destratification likely resulted in the first rise in atmospheric pCO2, whereas the density destratification of the deep South Atlantic lags the second rise in atmospheric pCO2 during the late deglacial period. Our findings emphasize that the physical and chemical destratification of the ocean are not as tightly coupled as generally assumed.

Application of molecular markers in wheat breeding: Reality or delusion?

Directory of Open Access Journals (Sweden)

Kobiljski Borislav

2004-01-01

Full Text Available Conventional plant breeding use morphological and phenotypic markers for the identification of important agronomic traits. Plant breeders and scientists continuously seek to develop new techniques, which can be used for faster and more accurate introgression of desirable traits into plants. Over the last several years there has been significant increase in the application of molecular markers in the breeding programmes of different species. So far, detected level of polymorphism and informatitivnes of different molecular marker methods applied in MAS (Marker Assisted Selection studies (RFLP, AFLP, etc. were insufficient either to validate their further use or there were very expensive and of huge healthy risk. Fortunately for wheat (and other crops breeders, the new class of molecular markers - microsatellites have prove recently to be most powerful for MAS. But, due to lack of the knowledge, experience, valid informations and even tradition and habits, many breeders have either negative or repulsive attitude towards implementation of MAS in breeding programes. In this paper the relevant facts regarding implementation of MAS in breeding are discussed in general, and for wheat breeding in particular, in order to summarize merits and limitations in application of microsatellites in MAS selection. .

Segmented Poincaré plot analysis for risk stratification in patients with dilated cardiomyopathy.

Science.gov (United States)

Voss, A; Fischer, C; Schroeder, R; Figulla, H R; Goernig, M

2010-01-01

The prognostic value of heart rate variability in patients with dilated cardiomyopathy (DCM) is limited and does not contribute to risk stratification although the dynamics of ventricular repolarization differs considerably between DCM patients and healthy subjects. Neither linear nor nonlinear methods of heart rate variability analysis could discriminate between patients at high and low risk for sudden cardiac death. The aim of this study was to analyze the suitability of the new developed segmented Poincaré plot analysis (SPPA) to enhance risk stratification in DCM. In contrast to the usual applied Poincaré plot analysis the SPPA retains nonlinear features from investigated beat-to-beat interval time series. Main features of SPPA are the rotation of cloud of points and their succeeded variability depended segmentation. Significant row and column probabilities were calculated from the segments and led to discrimination (up to pplot analysis of heart rate variability was able to contribute to risk stratification in patients suffering from DCM.

Multi-Layered Stratification in the Baltic Sea: Insight from a Modeling Study with Reference to Environmental Conditions

Directory of Open Access Journals (Sweden)

Bijan Dargahi

2017-01-01

Full Text Available The hydrodynamic and transport characteristics of the Baltic Sea in the period 2000–2009 were studied using a fully calibrated and validated 3D hydrodynamic model with a horizontal resolution of 4.8 km. This study provided new insight into the type and dynamics of vertical structure in the Baltic Sea, not considered in previous studies. Thermal and salinity stratification are both addressed, with a focus on the structural properties of the layers. The detection of cooler regions (dicothermal within the layer structure is an important finding. The detailed investigation of thermal stratification for a 10-year period (i.e., 2000–2009 revealed some new features. A multilayered structure that contains several thermocline and dicothermal layers was identified from this study. Statistical analysis of the simulation results made it possible to derive the mean thermal stratification properties, expressed as mean temperatures and the normalized layer thicknesses. The three-layered model proposed by previous investigators appears to be valid only during the winter periods; for other periods, a multi-layered structure with more than five layers has been identified during this investigation. This study provides detailed insight into thermal and salinity stratification in the Baltic Sea during a recent decade that can be used as a basis for diverse environmental assessments. It extends previous studies on stratification in the Baltic Sea regarding both the extent and the nature of stratification.

Authorial and institutional stratification in open access publishing: the case of global health research.

Science.gov (United States)

Siler, Kyle; Haustein, Stefanie; Smith, Elise; Larivière, Vincent; Alperin, Juan Pablo

2018-01-01

Using a database of recent articles published in the field of Global Health research, we examine institutional sources of stratification in publishing access outcomes. Traditionally, the focus on inequality in scientific publishing has focused on prestige hierarchies in established print journals. This project examines stratification in contemporary publishing with a particular focus on subscription vs. various Open Access (OA) publishing options. Findings show that authors working at lower-ranked universities are more likely to publish in closed/paywalled outlets, and less likely to choose outlets that involve some sort of Article Processing Charge (APCs; gold or hybrid OA). We also analyze institutional differences and stratification in the APC costs paid in various journals. Authors affiliated with higher-ranked institutions, as well as hospitals and non-profit organizations pay relatively higher APCs for gold and hybrid OA publications. Results suggest that authors affiliated with high-ranked universities and well-funded institutions tend to have more resources to choose pay options with publishing. Our research suggests new professional hierarchies developing in contemporary publishing, where various OA publishing options are becoming increasingly prominent. Just as there is stratification in institutional representation between different types of publishing access, there is also inequality within access types.

Optimising preoperative risk stratification tools for prostate cancer using mpMRI

Energy Technology Data Exchange (ETDEWEB)

Reisaeter, Lars A.R.; Losnegaard, Are; Biermann, Martin; Roervik, Jarle [Haukeland University Hospital, Department of Radiology, Bergen (Norway); University of Bergen, Department of Clinical Medicine, Bergen (Norway); Fuetterer, Jurgen J. [Radboud University Nijmegen Medical Centre, Department of Radiology, Nijmegen (Netherlands); Nygaard, Yngve [Haukeland University Hospital, Department of Urology, Bergen (Norway); Monssen, Jan [Haukeland University Hospital, Department of Radiology, Bergen (Norway); Gravdal, Karsten [Haukeland University Hospital, Department of Pathology, Bergen (Norway); Halvorsen, Ole J.; Akslen, Lars A. [Haukeland University Hospital, Department of Pathology, Bergen (Norway); Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, University of Bergen (Norway); Haukaas, Svein; Beisland, Christian [University of Bergen, Department of Clinical Medicine, Bergen (Norway); Haukeland University Hospital, Department of Urology, Bergen (Norway)

2018-03-15

To improve preoperative risk stratification for prostate cancer (PCa) by incorporating multiparametric MRI (mpMRI) features into risk stratification tools for PCa, CAPRA and D'Amico. 807 consecutive patients operated on by robot-assisted radical prostatectomy at our institution during the period 2010-2015 were followed to identify biochemical recurrence (BCR). 591 patients were eligible for final analysis. We employed stepwise backward likelihood methodology and penalised Cox cross-validation to identify the most significant predictors of BCR including mpMRI features. mpMRI features were then integrated into image-adjusted (IA) risk prediction models and the two risk prediction tools were then evaluated both with and without image adjustment using receiver operating characteristics, survival and decision curve analyses. 37 patients suffered BCR. Apparent diffusion coefficient (ADC) and radiological extraprostatic extension (rEPE) from mpMRI were both significant predictors of BCR. Both IA prediction models reallocated more than 20% of intermediate-risk patients to the low-risk group, reducing their estimated cumulative BCR risk from approximately 5% to 1.1%. Both IA models showed improved prognostic performance with a better separation of the survival curves. Integrating ADC and rEPE from mpMRI of the prostate into risk stratification tools improves preoperative risk estimation for BCR. (orig.)

Numerical analysis of stratification and destratification processes in a tidally energetic inlet with an ebb tidal delta

NARCIS (Netherlands)

Purkiani, K.; Becherer, J.; Flöser, G.; Gräwe, U.; Mohrholz, V.; Schuttelaars, H.M.; Burchard, H.

2015-01-01

Stratification and destratification processes in a tidally energetic, weakly stratified inlet in the Wadden Sea (south eastern North Sea) are investigated in this modeling study. Observations of current velocity and vertical density structure show strain-induced periodic stratification for the

III - V semiconductor structures for biosensor and molecular electronics applications

Energy Technology Data Exchange (ETDEWEB)

Luber, S M

2007-01-15

The present work reports on the employment of III-V semiconductor structures to biosensor and molecular electronics applications. In the first part a sensor based on a surface-near two dimensional electron gas for a use in biological environment is studied. Such a two dimensional electron gas inherently forms in a molecular beam epitaxy (MBE) grown, doped aluminum gallium arsenide - gallium arsenide (AlGaAs-GaAs) heterostructure. Due to the intrinsic instability of GaAs in aqueous solutions the device is passivated by deposition of a monolayer of 4'-substituted mercaptobiphenyl molecules. The influence of these molecules which bind to the GaAs via a sulfur group is investigated by Kelvin probe measurements in air. They reveal a dependence of GaAs electron affinity on the intrinsic molecular dipole moment of the mercaptobiphenyls. Furthermore, transient surface photovoltage measurements are presented which demonstrate an additional influence of mercaptobiphenyl chemisorption on surface carrier recombination rates. As a next step, the influence of pH-value and salt concentration upon the sensor device is discussed based on the results obtained from sensor conductance measurements in physiological solutions. A dependence of the device surface potential on both parameters due to surface charging is deduced. Model calculations applying Poisson-Boltzmann theory reveal as possible surface charging mechanisms either the adsorption of OH- ions on the surface, or the dissociation of OH groups in surface oxides. A comparison between simulation settings and physical device properties indicate the OH- adsorption as the most probable mechanism. In the second part of the present study the suitability of MBE grown III-V semiconductor structures for molecular electronics applications is examined. In doing so, a method to fabricate nanometer separated, coplanar, metallic electrodes based on the cleavage of a supporting AlGaAs-GaAs heterostructure is presented. This is followed by a

III - V semiconductor structures for biosensor and molecular electronics applications

Energy Technology Data Exchange (ETDEWEB)

Luber, S.M.

2007-01-15

The present work reports on the employment of III-V semiconductor structures to biosensor and molecular electronics applications. In the first part a sensor based on a surface-near two dimensional electron gas for a use in biological environment is studied. Such a two dimensional electron gas inherently forms in a molecular beam epitaxy (MBE) grown, doped aluminum gallium arsenide - gallium arsenide (AlGaAs-GaAs) heterostructure. Due to the intrinsic instability of GaAs in aqueous solutions the device is passivated by deposition of a monolayer of 4'-substituted mercaptobiphenyl molecules. The influence of these molecules which bind to the GaAs via a sulfur group is investigated by Kelvin probe measurements in air. They reveal a dependence of GaAs electron affinity on the intrinsic molecular dipole moment of the mercaptobiphenyls. Furthermore, transient surface photovoltage measurements are presented which demonstrate an additional influence of mercaptobiphenyl chemisorption on surface carrier recombination rates. As a next step, the influence of pH-value and salt concentration upon the sensor device is discussed based on the results obtained from sensor conductance measurements in physiological solutions. A dependence of the device surface potential on both parameters due to surface charging is deduced. Model calculations applying Poisson-Boltzmann theory reveal as possible surface charging mechanisms either the adsorption of OH- ions on the surface, or the dissociation of OH groups in surface oxides. A comparison between simulation settings and physical device properties indicate the OH- adsorption as the most probable mechanism. In the second part of the present study the suitability of MBE grown III-V semiconductor structures for molecular electronics applications is examined. In doing so, a method to fabricate nanometer separated, coplanar, metallic electrodes based on the cleavage of a supporting AlGaAs-GaAs heterostructure is presented. This is followed

Improving Clinical Risk Stratification at Diagnosis in Primary Prostate Cancer: A Prognostic Modelling Study.

Directory of Open Access Journals (Sweden)

Vincent J Gnanapragasam

2016-08-01

Full Text Available Over 80% of the nearly 1 million men diagnosed with prostate cancer annually worldwide present with localised or locally advanced non-metastatic disease. Risk stratification is the cornerstone for clinical decision making and treatment selection for these men. The most widely applied stratification systems use presenting prostate-specific antigen (PSA concentration, biopsy Gleason grade, and clinical stage to classify patients as low, intermediate, or high risk. There is, however, significant heterogeneity in outcomes within these standard groupings. The International Society of Urological Pathology (ISUP has recently adopted a prognosis-based pathological classification that has yet to be included within a risk stratification system. Here we developed and tested a new stratification system based on the number of individual risk factors and incorporating the new ISUP prognostic score.Diagnostic clinicopathological data from 10,139 men with non-metastatic prostate cancer were available for this study from the Public Health England National Cancer Registration Service Eastern Office. This cohort was divided into a training set (n = 6,026; 1,557 total deaths, with 462 from prostate cancer and a testing set (n = 4,113; 1,053 total deaths, with 327 from prostate cancer. The median follow-up was 6.9 y, and the primary outcome measure was prostate-cancer-specific mortality (PCSM. An external validation cohort (n = 1,706 was also used. Patients were first categorised as low, intermediate, or high risk using the current three-stratum stratification system endorsed by the National Institute for Health and Care Excellence (NICE guidelines. The variables used to define the groups (PSA concentration, Gleason grading, and clinical stage were then used to sub-stratify within each risk category by testing the individual and then combined number of risk factors. In addition, we incorporated the new ISUP prognostic score as a discriminator. Using this approach, a

Intra-tumor heterogeneity in breast cancer has limited impact on transcriptomic-based molecular profiling.

Science.gov (United States)

Karthik, Govindasamy-Muralidharan; Rantalainen, Mattias; Stålhammar, Gustav; Lövrot, John; Ullah, Ikram; Alkodsi, Amjad; Ma, Ran; Wedlund, Lena; Lindberg, Johan; Frisell, Jan; Bergh, Jonas; Hartman, Johan

2017-11-29

Transcriptomic profiling of breast tumors provides opportunity for subtyping and molecular-based patient stratification. In diagnostic applications the specimen profiled should be representative of the expression profile of the whole tumor and ideally capture properties of the most aggressive part of the tumor. However, breast cancers commonly exhibit intra-tumor heterogeneity at molecular, genomic and in phenotypic level, which can arise during tumor evolution. Currently it is not established to what extent a random sampling approach may influence molecular breast cancer diagnostics. In this study we applied RNA-sequencing to quantify gene expression in 43 pieces (2-5 pieces per tumor) from 12 breast tumors (Cohort 1). We determined molecular subtype and transcriptomic grade for all tumor pieces and analysed to what extent pieces originating from the same tumors are concordant or discordant with each other. Additionally, we validated our finding in an independent cohort consisting of 19 pieces (2-6 pieces per tumor) from 6 breast tumors (Cohort 2) profiled using microarray technique. Exome sequencing was also performed on this cohort, to investigate the extent of intra-tumor genomic heterogeneity versus the intra-tumor molecular subtype classifications. Molecular subtyping was consistent in 11 out of 12 tumors and transcriptomic grade assignments were consistent in 11 out of 12 tumors as well. Molecular subtype predictions revealed consistent subtypes in four out of six patients in this cohort 2. Interestingly, we observed extensive intra-tumor genomic heterogeneity in these tumor pieces but not in their molecular subtype classifications. Our results suggest that macroscopic intra-tumoral transcriptomic heterogeneity is limited and unlikely to have an impact on molecular diagnostics for most patients.

Improving risk-stratification of Diabetes complications using temporal data mining.

Science.gov (United States)

Sacchi, Lucia; Dagliati, Arianna; Segagni, Daniele; Leporati, Paola; Chiovato, Luca; Bellazzi, Riccardo

2015-01-01

To understand which factor trigger worsened disease control is a crucial step in Type 2 Diabetes (T2D) patient management. The MOSAIC project, funded by the European Commission under the FP7 program, has been designed to integrate heterogeneous data sources and provide decision support in chronic T2D management through patients' continuous stratification. In this work we show how temporal data mining can be fruitfully exploited to improve risk stratification. In particular, we exploit administrative data on drug purchases to divide patients in meaningful groups. The detection of drug consumption patterns allows stratifying the population on the basis of subjects' purchasing attitude. Merging these findings with clinical values indicates the relevance of the applied methods while showing significant differences in the identified groups. This extensive approach emphasized the exploitation of administrative data to identify patterns able to explain clinical conditions.

Aplicação catalítica de peneiras moleculares básicas micro e mesoporosas Catalytic applications of basic micro and mesoporous molecular sieves

Directory of Open Access Journals (Sweden)

Leandro Martins

2006-04-01

Full Text Available Catalysis by solid acids has received much attention due to its importance in petroleum refining and petrochemical processes. Relatively few studies have focused on catalysis by bases and even les on using basic molecular sieves. This paper deals with the potential application of micro and mesoporous molecular sieves in base catalysis reactions. The paper is divided in two parts, the first one dedicated to the design of the catalysts and the second to some relevant examples of catalytic reactions, which find a huge field of applications essentially in the synthesis of fine chemicals. Here, recent developments in catalysis by basic molecular sieves and the perspectives of applications in correlated catalytic processes are described.

Progress in molecular-based management of differentiated thyroid cancer

Science.gov (United States)

Xing, Mingzhao; Haugen, Bryan R; Schlumberger, Martin

2014-01-01

Substantial developments have occurred in the past 5–10 years in clinical translational research of thyroid cancer. Diagnostic molecular markers, such as RET-PTC, RAS, and BRAFV600E mutations; galectin 3; and a new gene expression classifier, are outstanding examples that have improved diagnosis of thyroid nodules. BRAF mutation is a prognostic genetic marker that has improved risk stratification and hence tailored management of patients with thyroid cancer, including those with conventionally low risks. Novel molecular-targeted treatments hold great promise for radioiodine-refractory and surgically inoperable thyroid cancers as shown in clinical trials; such treatments are likely to become a component of the standard treatment regimen for patients with thyroid cancer in the near future. These novel molecular-based management strategies for thyroid nodules and thyroid cancer are the most exciting developments in this unprecedented era of molecular thyroid-cancer medicine. PMID:23668556

Opportunities and limitations related to the application of plant-derived lipid molecular proxies in soil science

Directory of Open Access Journals (Sweden)

B. Jansen

2017-11-01

Full Text Available The application of lipids in soils as molecular proxies, also often referred to as biomarkers, has dramatically increased in the last decades. Applications range from inferring changes in past vegetation composition, climate, and/or human presence to unraveling the input and turnover of soil organic matter (SOM. The molecules used are extractable and non-extractable lipids, including ester-bound lipids. In addition, the carbon or hydrogen isotopic composition of such molecules is used. While holding great promise, the application of soil lipids as molecular proxies comes with several constraining factors, the most important of which are (i variability in the molecular composition of plant-derived organic matter both internally and between individual plants, (ii variability in (the relative contribution of input pathways into the soil, and (iii the transformation and/or (selective degradation of (some of the molecules once present in the soil. Unfortunately, the information about such constraining factors and their impact on the applicability of molecular proxies is fragmented and scattered. The purpose of this study is to provide a critical review of the current state of knowledge with respect to the applicability of molecular proxies in soil science, specifically focusing on the factors constraining such applicability. Variability in genetic, ontogenetic, and environmental factors influences plant n-alkane patterns in such a way that no unique compounds or specific molecular proxies pointing to, for example, plant community differences or environmental influences, exist. Other components, such as n-alcohols, n-fatty acids, and cutin- and suberin-derived monomers, have received far less attention in this respect. Furthermore, there is a high diversity of input pathways offering both opportunities and limitations for the use of molecular proxies at the same time. New modeling approaches might offer a possibility to unravel such mixed input

Appendix E: Research papers. Use of remote sensing in landscape stratification for environmental impact assessment

Science.gov (United States)

Stanturf, J. A.; Heimbuch, D. G.

1980-01-01

A refinement to the matrix approach to environmental impact assessment is to use landscape units in place of separate environmental elements in the analysis. Landscape units can be delineated by integrating remotely sensed data and available single-factor data. A remote sensing approach to landscape stratification is described and the conditions under which it is superior to other approaches that require single-factor maps are indicated. Flowcharts show the steps necessary to develop classification criteria, delineate units and a map legend, and use the landscape units in impact assessment. Application of the approach to assessing impacts of a transmission line in Montana is presented to illustrate the method.

Molecular analysis of childhood primitive neuroectodermal tumors defines markers associated with poor outcome

DEFF Research Database (Denmark)

Scheurlen, W G; Schwabe, G C; Joos, S

1998-01-01

PURPOSE: The diagnostic and prognostic significance of well-defined molecular markers was investigated in childhood primitive neuroectodermal tumors (PNET). MATERIALS AND METHODS: Using microsatellite analysis, Southern blot analysis, and fluorescence in situ hybridization (FISH), 30 primary tumors......: In our study, amplification of c-myc was a poor-prognosis marker in PNET. LOH of chromosome 17p was associated with metastatic disease. Molecular analysis of primary tumors using these markers may be useful for stratification of children with PNET in future prospective studies. The other aberrations...... investigated were not of significant prognostic value, but may provide an entry point for future large-scale molecular studies....

Noninvasive risk stratification for sudden death in asymptomatic patients with Wolff-Parkinson-White syndrome.

Science.gov (United States)

Novella, John; DeBiasi, Ralph M; Coplan, Neil L; Suri, Ranji; Keller, Seth

2014-01-01

Sudden cardiac death (SCD) as the first clinical manifestation of Wolff-Parkinson-White (WPW) syndrome is a well-documented, although rare occurrence. The incidence of SCD in patients with WPW ranges from 0% to 0.39% annually. Controversy exists regarding risk stratification for patients with preexcitation on surface electrocardiogram (ECG), particularly in those who are asymptomatic. This article focuses on the role of risk stratification using exercise and pharmacologic testing in patients with WPW pattern on ECG.

Simulation of Thermal Stratification in BWR Suppression Pools with One Dimensional Modeling Method

Energy Technology Data Exchange (ETDEWEB)

Haihua Zhao; Ling Zou; Hongbin Zhang

2014-01-01

The suppression pool in a boiling water reactor (BWR) plant not only is the major heat sink within the containment system, but also provides the major emergency cooling water for the reactor core. In several accident scenarios, such as a loss-of-coolant accident and extended station blackout, thermal stratification tends to form in the pool after the initial rapid venting stage. Accurately predicting the pool stratification phenomenon is important because it affects the peak containment pressure; the pool temperature distribution also affects the NPSHa (available net positive suction head) and therefore the performance of the Emergency Core Cooling System and Reactor Core Isolation Cooling System pumps that draw cooling water back to the core. Current safety analysis codes use zero dimensional (0-D) lumped parameter models to calculate the energy and mass balance in the pool; therefore, they have large uncertainties in the prediction of scenarios in which stratification and mixing are important. While three-dimensional (3-D) computational fluid dynamics (CFD) methods can be used to analyze realistic 3-D configurations, these methods normally require very fine grid resolution to resolve thin substructures such as jets and wall boundaries, resulting in a long simulation time. For mixing in stably stratified large enclosures, the BMIX++ code (Berkeley mechanistic MIXing code in C++) has been developed to implement a highly efficient analysis method for stratification where the ambient fluid volume is represented by one-dimensional (1-D) transient partial differential equations and substructures (such as free or wall jets) are modeled with 1-D integral models. This allows very large reductions in computational effort compared to multi-dimensional CFD modeling. One heat-up experiment performed at the Finland POOLEX facility, which was designed to study phenomena relevant to Nordic design BWR suppression pool including thermal stratification and mixing, is used for

Thermal stratification in a hot water tank established by heat loss from the tank

DEFF Research Database (Denmark)

Fan, Jianhua; Furbo, Simon

2012-01-01

This paper presents numerical investigations of thermal stratification in a vertical cylindrical hot water tank established by standby heat loss from the tank. The transient fluid flow and heat transfer in the tank during cooling caused by standby heat loss are calculated by means of validated...... computational fluid dynamics (CFD) models. The measured heat loss coefficient for the different parts of the tank is used as input to the CFD model. Parametric studies are carried out using the validated models to investigate the influence on thermal stratification of the tank by the downward flow...... the heat loss from the tank sides will be distributed at different levels of the tank at different thermal conditions. The results show that 20–55% of the side heat loss drops to layers below in the part of the tank without the presence of thermal stratification. A heat loss removal factor is introduced...

Thermal stratification in a hot water tank established by heat loss from the tank

DEFF Research Database (Denmark)

Fan, Jianhua; Furbo, Simon

2009-01-01

Results of experimental and numerical investigations of thermal stratification and natural convection in a vertical cylindrical hot water tank during standby periods are presented. The transient fluid flow and heat transfer in the tank during cooling caused by heat loss are investigated...... on the natural buoyancy resulting in downward flow along the tank side walls due to heat loss of the tank and the influence on thermal stratification of the tank by the downward flow and the corresponding upward flow in the central parts of the tank. Water temperatures at different levels of the tank...... by computational fluid dynamics (CFD) calculations and by thermal measurements. A tank with uniform temperatures and thermal stratification is studied. The distribution of the heat loss coefficient for the different parts of the tank is measured by tests and used as input to the CFD model. The investigations focus...

The Effect of an Isogrid on Cryogenic Propellant Behavior and Thermal Stratification

Science.gov (United States)

Oliveira, Justin; Kirk, Daniel R.; Chintalapati, Sunil; Schallhorn, Paul A.; Piquero, Jorge L.; Campbell, Mike; Chase, Sukhdeep

2007-01-01

All models for thermal stratification available in the presentation are derived using smooth, flat plate laminar and turbulent boundary layer models. This study examines the effect of isogrid (roughness elements) on the surface of internal tank walls to mimic the effects of weight-saving isogrid, which is located on the inside of many rocket propellant tanks. Computational Fluid Dynamics (CFD) is used to study the momentum and thermal boundary layer thickness for free convection flows over a wall with generic roughness elements. This presentation makes no mention of actual isogrid sizes or of any specific tank geometry. The magnitude of thermal stratification is compared for smooth and isogrid-lined walls.

Educational stratification in cultural participation: Cognitive competence or status motivation?

NARCIS (Netherlands)

Notten, N.; Bol, Th.; van de Werfhorst, H.G.; Ganzeboom, H.B.G.

2015-01-01

This article examines educational stratification in highbrow cultural participation. There are two contrasting explanations of why cultural participation is stratified. The status hypothesis predicts that people come to appreciate particular forms of art because it expresses their belonging to a

Educational stratification in cultural participation: cognitive competence or status motivation?

NARCIS (Netherlands)

Notten, N.; Lancee, B.; van de Werfhorst, H.G.; Ganzeboom, H.B.G.

2015-01-01

This article examines educational stratification in highbrow cultural participation. There are two contrasting explanations of why cultural participation is stratified. The status hypothesis predicts that people come to appreciate particular forms of art because it expresses their belonging to a

Viral lysis of marine microbes in relation to vertical stratification

NARCIS (Netherlands)

Mojica, K.D.A.

2015-01-01

Marine microorganisms represent the largest reservoir of living organic carbon in the ocean and collectively manage the pools and fluxes of nutrients and energy. Climate-induced increases in sea surface temperature and associated modifications to vertical stratification are affecting the structure

Applications of molecular markers in the discrimination of Panax species and Korean ginseng cultivars (Panax ginseng

Directory of Open Access Journals (Sweden)

Ick Hyun Jo

2017-10-01

Full Text Available The development of molecular markers is one of the most useful methods for molecular breeding and marker-based molecular associated selections. Even though there is less information on the reference genome, molecular markers are indispensable tools for determination of genetic variation and identification of species with high levels of accuracy and reproducibility. The demand for molecular approaches for marker-based breeding and genetic discriminations in Panax species has greatly increased in recent times and has been successfully applied for various purposes. However, owing to the existence of diverse molecular techniques and differences in their principles and applications, there should be careful consideration while selecting appropriate marker types. In this review, we outline the recent status of different molecular marker applications in ginseng research and industrial fields. In addition, we discuss the basic principles, requirements, and advantages and disadvantages of the most widely used molecular markers, including restriction fragment length polymorphism, random amplified polymorphic DNA, sequence tag sites, simple sequence repeats, and single nucleotide polymorphisms.

Applications of molecular markers in the discrimination of Panax species and Korean ginseng cultivars (Panax ginseng).

Science.gov (United States)

Jo, Ick Hyun; Kim, Young Chang; Kim, Dong Hwi; Kim, Kee Hong; Hyun, Tae Kyung; Ryu, Hojin; Bang, Kyong Hwan

2017-10-01

The development of molecular markers is one of the most useful methods for molecular breeding and marker-based molecular associated selections. Even though there is less information on the reference genome, molecular markers are indispensable tools for determination of genetic variation and identification of species with high levels of accuracy and reproducibility. The demand for molecular approaches for marker-based breeding and genetic discriminations in Panax species has greatly increased in recent times and has been successfully applied for various purposes. However, owing to the existence of diverse molecular techniques and differences in their principles and applications, there should be careful consideration while selecting appropriate marker types. In this review, we outline the recent status of different molecular marker applications in ginseng research and industrial fields. In addition, we discuss the basic principles, requirements, and advantages and disadvantages of the most widely used molecular markers, including restriction fragment length polymorphism, random amplified polymorphic DNA, sequence tag sites, simple sequence repeats, and single nucleotide polymorphisms.

Prognostic stratification of patients with advanced renal cell carcinoma treated with sunitinib: comparison with the Memorial Sloan-Kettering prognostic factors model

International Nuclear Information System (INIS)

Bamias, Aristotelis; Anastasiou, Ioannis; Stravodimos, Kostas; Xanthakis, Ioannis; Skolarikos, Andreas; Christodoulou, Christos; Syrigos, Kostas; Papandreou, Christos; Razi, Evangelia; Dafni, Urania; Fountzilas, George; Karadimou, Alexandra; Dimopoulos, Meletios A; Lampaki, Sofia; Lainakis, George; Malettou, Lia; Timotheadou, Eleni; Papazisis, Kostas; Andreadis, Charalambos; Kontovinis, Loukas

2010-01-01

The treatment paradigm in advanced renal cell carcinoma (RCC) has changed in the recent years. Sunitinib has been established as a new standard for first-line therapy. We studied the prognostic significance of baseline characteristics and we compared the risk stratification with the established Memorial Sloan Kettering Cancer Center (MSKCC) model. This is a retrospective analysis of patients treated in six Greek Oncology Units of HECOG. Inclusion criteria were: advanced renal cell carcinoma not amenable to surgery and treatment with Sunitinib. Previous cytokine therapy but no targeted agents were allowed. Overall survival (OS) was the major end point. Significance of prognostic factors was evaluated with multivariate cox regression analysis. A model was developed to stratify patients according to risk. One hundred and nine patients were included. Median follow up has been 15.8 months and median OS 17.1 months (95% CI: 13.7-20.6). Time from diagnosis to the start of Sunitinib (<= 12 months vs. >12 months, p = 0.001), number of metastatic sites (1 vs. >1, p = 0.003) and performance status (PS) (<= 1 vs >1, p = 0.001) were independently associated with OS. Stratification in two risk groups ('low' risk: 0 or 1 risk factors; 'high' risk: 2 or 3 risk factors) resulted in distinctly different OS (median not reached [NR] vs. 10.8 [95% confidence interval (CI): 8.3-13.3], p < 0.001). The application of the MSKCC risk criteria resulted in stratification into 3 groups (low and intermediate and poor risk) with distinctly different prognosis underlying its validity. Nevertheless, MSKCC model did not show an improved prognostic performance over the model developed by this analysis. Studies on risk stratification of patients with advanced RCC treated with targeted therapies are warranted. Our results suggest that a simpler than the MSKCC model can be developed. Such models should be further validated

Access, Resources, and Classes in the History of Capitalism: A Theory of Social Stratification from a Cognitive Materialist Perspective

Directory of Open Access Journals (Sweden)

Mariano Zukerfeld

2016-04-01

Full Text Available This article aims to apply some concepts from cognitive materialism to the sociological problem of social stratification in capitalism, both in theoretical and abstract terms and through concrete historical examples. After discussing the necessity for a theory of social classes, a division is presented between two types of resources: those intensive in material and energy, and those which are knowledge intensive. At the same time three alternative conditions of access to these resources are theorized: exclusive access (applicable to physical or intellectual property, non-exclusive access, and no access. Combining the different types of resource with the different types of access, we obtain a proposal for a theory of classes (reclaiming this theory as the most powerful for the analysis of social stratification which we apply, in a simplified and schematic way, to various periods. Thus, we analyze social strata in the transition from feudalism to mercantile capitalism, the subsequent transition to industrial capitalism (in which we distinguish two clearly differentiated stages, and finally, in the current transformation into informational capitalism.

Quantitative stratification of diffuse parenchymal lung diseases.

Directory of Open Access Journals (Sweden)

Sushravya Raghunath

Full Text Available Diffuse parenchymal lung diseases (DPLDs are characterized by widespread pathological changes within the pulmonary tissue that impair the elasticity and gas exchange properties of the lungs. Clinical-radiological diagnosis of these diseases remains challenging and their clinical course is characterized by variable disease progression. These challenges have hindered the introduction of robust objective biomarkers for patient-specific prediction based on specific phenotypes in clinical practice for patients with DPLD. Therefore, strategies facilitating individualized clinical management, staging and identification of specific phenotypes linked to clinical disease outcomes or therapeutic responses are urgently needed. A classification schema consistently reflecting the radiological, clinical (lung function and clinical outcomes and pathological features of a disease represents a critical need in modern pulmonary medicine. Herein, we report a quantitative stratification paradigm to identify subsets of DPLD patients with characteristic radiologic patterns in an unsupervised manner and demonstrate significant correlation of these self-organized disease groups with clinically accepted surrogate endpoints. The proposed consistent and reproducible technique could potentially transform diagnostic staging, clinical management and prognostication of DPLD patients as well as facilitate patient selection for clinical trials beyond the ability of current radiological tools. In addition, the sequential quantitative stratification of the type and extent of parenchymal process may allow standardized and objective monitoring of disease, early assessment of treatment response and mortality prediction for DPLD patients.

Quantitative Stratification of Diffuse Parenchymal Lung Diseases

Science.gov (United States)

Raghunath, Sushravya; Rajagopalan, Srinivasan; Karwoski, Ronald A.; Maldonado, Fabien; Peikert, Tobias; Moua, Teng; Ryu, Jay H.; Bartholmai, Brian J.; Robb, Richard A.

2014-01-01

Diffuse parenchymal lung diseases (DPLDs) are characterized by widespread pathological changes within the pulmonary tissue that impair the elasticity and gas exchange properties of the lungs. Clinical-radiological diagnosis of these diseases remains challenging and their clinical course is characterized by variable disease progression. These challenges have hindered the introduction of robust objective biomarkers for patient-specific prediction based on specific phenotypes in clinical practice for patients with DPLD. Therefore, strategies facilitating individualized clinical management, staging and identification of specific phenotypes linked to clinical disease outcomes or therapeutic responses are urgently needed. A classification schema consistently reflecting the radiological, clinical (lung function and clinical outcomes) and pathological features of a disease represents a critical need in modern pulmonary medicine. Herein, we report a quantitative stratification paradigm to identify subsets of DPLD patients with characteristic radiologic patterns in an unsupervised manner and demonstrate significant correlation of these self-organized disease groups with clinically accepted surrogate endpoints. The proposed consistent and reproducible technique could potentially transform diagnostic staging, clinical management and prognostication of DPLD patients as well as facilitate patient selection for clinical trials beyond the ability of current radiological tools. In addition, the sequential quantitative stratification of the type and extent of parenchymal process may allow standardized and objective monitoring of disease, early assessment of treatment response and mortality prediction for DPLD patients. PMID:24676019

Molecular physics and chemistry applications of quantum Monte Carlo

International Nuclear Information System (INIS)

Reynolds, P.J.; Barnett, R.N.; Hammond, B.L.; Lester, W.A. Jr.

1985-09-01

We discuss recent work with the diffusion quantum Monte Carlo (QMC) method in its application to molecular systems. The formal correspondence of the imaginary time Schroedinger equation to a diffusion equation allows one to calculate quantum mechanical expectation values as Monte Carlo averages over an ensemble of random walks. We report work on atomic and molecular total energies, as well as properties including electron affinities, binding energies, reaction barriers, and moments of the electronic charge distribution. A brief discussion is given on how standard QMC must be modified for calculating properties. Calculated energies and properties are presented for a number of molecular systems, including He, F, F - , H 2 , N, and N 2 . Recent progress in extending the basic QMC approach to the calculation of ''analytic'' (as opposed to finite-difference) derivatives of the energy is presented, together with an H 2 potential-energy curve obtained using analytic derivatives. 39 refs., 1 fig., 2 tabs

Molecular subtyping of cancer: current status and moving toward clinical applications.

Science.gov (United States)

Zhao, Lan; Lee, Victor H F; Ng, Michael K; Yan, Hong; Bijlsma, Maarten F

2018-04-12

Cancer is a collection of genetic diseases, with large phenotypic differences and genetic heterogeneity between different types of cancers and even within the same cancer type. Recent advances in genome-wide profiling provide an opportunity to investigate global molecular changes during the development and progression of cancer. Meanwhile, numerous statistical and machine learning algorithms have been designed for the processing and interpretation of high-throughput molecular data. Molecular subtyping studies have allowed the allocation of cancer into homogeneous groups that are considered to harbor similar molecular and clinical characteristics. Furthermore, this has helped researchers to identify both actionable targets for drug design as well as biomarkers for response prediction. In this review, we introduce five frequently applied techniques for generating molecular data, which are microarray, RNA sequencing, quantitative polymerase chain reaction, NanoString and tissue microarray. Commonly used molecular data for cancer subtyping and clinical applications are discussed. Next, we summarize a workflow for molecular subtyping of cancer, including data preprocessing, cluster analysis, supervised classification and subtype characterizations. Finally, we identify and describe four major challenges in the molecular subtyping of cancer that may preclude clinical implementation. We suggest that standardized methods should be established to help identify intrinsic subgroup signatures and build robust classifiers that pave the way toward stratified treatment of cancer patients.

A Study on an Evaluation of PWR Piping Thermal Stratification

Energy Technology Data Exchange (ETDEWEB)

Lee, H.; Kim, B.N.; Lee, S.K.; Jeong, I.S.; Chjung, B.S.; Lee, S.H. [Korea Electric Power Research Institute, Taejeon (Korea, Republic of)

1997-12-31

This report presents the determination of thermal stratification phenomenon of pressurizer surge line for Kori unit No.4. With this regards, the integrity of related piping was evaluated by both various stress analysis and fatigue analysis. (author). 23 refs., 61 figs., 22 tabs.

Clinical Studies in Risk Stratification & Therapy of Thoracic Aortic Disease

NARCIS (Netherlands)

Kamman, AV

2017-01-01

For this thesis we aimed to summarize outcomes and optimal treatment modality for thoracic aortic disease, discuss new imaging techniques and improve the use of current imaging modalities. Furthermore, we aimed to improve risk stratification for uncomplicated type B aortic dissection (TBAD) and

Atomic and Molecular Data and Their Applications. Proceedings

International Nuclear Information System (INIS)

Mohr, P.J.; Wiese, W.L.

1998-01-01

These proceedings contain papers based on invited talks at the First International Conference on Atomic and Molecular Data and Their Applications held at the National Institute of Standards and Technology (INIST) in Gaithersburg, Maryland in October, 1997. The invited presentations addressed four major areas of importance to atomic and molecular data activities: Global trends affecting scientific data, collisions and spectral radiation data, date assessment and database and data management activities and lastly, data needs of the main user communities such as the magnetic and inertial fusion research communities, semiconductor-related plasma processing, the atmospheric research community and the space astronomy community, etc. These proceedings are expected to be of interest to both producers and users of data and provide up-to-date surveys on atomic and molecular data. A wide range of data has been presented including X-ray transition energies, atomic transition probabilities, atomic collisions data, data for cosmology and X-ray astronomy, data for fusion plasma diagnostics, etc. There were 27 invited talks and consequently 27 articles in these Proceedings. Out of these, 9 have been abstracted for the Energy Science and Technology database

Control Carbon to Prevent corium Stratification In-Vessel Retention

Energy Technology Data Exchange (ETDEWEB)

Go, A Ra; Hong, Seung Hyun; Kim, Sang Nyung [Kyung Hee Univ., Yongin (Korea, Republic of)

2013-10-15

As a result, the thermal margin decreases, and the nuclear reactor vessel may be destroyed. To control Carbons, which is the major cause of stratification, Ruthenium and Hafnium are inserted inside the lower reactor head which initiates a chemical reaction with Carbon. SPARTAN program is used to confirm a reaction probability which is measured in bond energy and strength etc. To analyze the possibility of bonding with Carbon, the initial property of Ruthenium and Carbon are measured during the calculated absorbing process. After following that theory, the Spartan program is able to determine if it can insert the metal. After verifying the combination of Ruthenium and Carbon, the Spartan program analyzes the impact of the Carbon to prevent the corium stratification. It determines the possibility of the success with the introduction of the IVR concept. Ruthenium is suitable to Carbon bonding process to decrease affect to corium behavior which do not form stratification. The metal which can combine with Carbon should be satisfied with temperature as high as 2800 .deg. C. Therefore, the further research works are determined by using the Spartan program to calculate the Carbon and Ruthenium bonding energy, and to check other bonding results as follows. After check the results, review this theory to insert the Ruthenium in reactor vessel. APR1400 and OPR1000, Korea Hydro and Nuclear power plant core meltdown accident has been evaluated a high level in severe accident. When the reactor core is melted down, it is stratified into the metal layer and the ceramic layer. As the heat conductivity of metal layer is higher than that of the ceramic layer, heat concentration occurs in the upper part of the bottom hemisphere which comes into contact with the metal layer.

Water-Column Stratification Observed along an AUV-Tracked Isotherm

Science.gov (United States)

Zhang, Y.; Messié, M.; Ryan, J. P.; Kieft, B.; Stanway, M. J.; Hobson, B.; O'Reilly, T. C.; Raanan, B. Y.; Smith, J. M.; Chavez, F.

2016-02-01

Studies of marine physical, chemical and microbiological processes benefit from observing in a Lagrangian frame of reference, i.e. drifting with ambient water. Because these processes can be organized relative to specific density or temperature ranges, maintaining observing platforms within targeted environmental ranges is an important observing strategy. We have developed a novel method to enable a Tethys-class long-range autonomous underwater vehicle (AUV) (which has a propeller and a buoyancy engine) to track a target isotherm in buoyancy-controlled drift mode. In this mode, the vehicle shuts off its propeller and autonomously detects the isotherm and stays with it by actively controlling the vehicle's buoyancy. In the June 2015 CANON (Controlled, Agile, and Novel Observing Network) Experiment in Monterey Bay, California, AUV Makai tracked a target isotherm for 13 hours to study the coastal upwelling system. The tracked isotherm started from 33 m depth, shoaled to 10 m, and then deepened to 29 m. The thickness of the tracked isotherm layer (within 0.3°C error from the target temperature) increased over this duration, reflecting weakened stratification around the isotherm. During Makai's isotherm tracking, another long-range AUV, Daphne, acoustically tracked Makai on a circular yo-yo trajectory, measuring water-column profiles in Makai's vicinity. A wave glider also acoustically tracked Makai, providing sea surface measurements on the track. The presented method is a new approach for studying water-column stratification, but requires careful analysis of the temporal and spatial variations mingled in the vehicles' measurements. We will present a synthesis of the water column's stratification in relation to the upwelling conditions, based on the in situ measurements by the mobile platforms, as well as remote sensing and mooring data.

Effect of stable stratification on dispersion within urban street canyons: A large-eddy simulation

Science.gov (United States)

Li, Xian-Xiang; Britter, Rex; Norford, Leslie K.

2016-11-01

This study employs a validated large-eddy simulation (LES) code with high tempo-spatial resolution to investigate the effect of a stably stratified roughness sublayer (RSL) on scalar transport within an urban street canyon. The major effect of stable stratification on the flow and turbulence inside the street canyon is that the flow slows down in both streamwise and vertical directions, a stagnant area near the street level emerges, and the vertical transport of momentum is weakened. Consequently, the transfer of heat between the street canyon and overlying atmosphere also gets weaker. The pollutant emitted from the street level 'pools' within the lower street canyon, and more pollutant accumulates within the street canyon with increasing stability. Under stable stratification, the dominant mechanism for pollutant transport within the street canyon has changed from ejections (flow carries high-concentration pollutant upward) to unorganized motions (flow carries high-concentration pollutant downward), which is responsible for the much lower dispersion efficiency under stable stratifications.

Noninvasive risk stratification of lethal ventricular arrhythmias and sudden cardiac death after myocardial infarction

Directory of Open Access Journals (Sweden)

Kenji Yodogawa, MD

2014-08-01

Full Text Available Prediction of lethal ventricular arrhythmias leading to sudden cardiac death is one of the most important and challenging problems after myocardial infarction (MI. Identification of MI patients who are prone to ventricular tachyarrhythmias allows for an indication of implantable cardioverter-defibrillator placement. To date, noninvasive techniques such as microvolt T-wave alternans (MTWA, signal-averaged electrocardiography (SAECG, heart rate variability (HRV, and heart rate turbulence (HRT have been developed for this purpose. MTWA is an indicator of repolarization abnormality and is currently the most promising risk-stratification tool for predicting malignant ventricular arrhythmias. Similarly, late potentials detected by SAECG are indices of depolarization abnormality and are useful in risk stratification. However, the role of SAECG is limited because of its low predictive accuracy. Abnormal HRV and HRT patterns reflect autonomic disturbances, which may increase the risk of lethal ventricular arrhythmias, but the existing evidence is insufficient. Further studies of noninvasive assessment may provide a new insight into risk stratification in post-MI patients.

Quantitative analysis of biogeochemically controlled density stratification in an iron-meromictic lake

Science.gov (United States)

Nixdorf, E.; Boehrer, B.

2015-11-01

Lake stratification controls the cycling of dissolved matter within the water body. This is of particular interest in the case of meromictic lakes, where permanent density stratification of the deep water limits vertical transport, and a chemically different (reducing) milieu can be established. As a consequence, the geochemical setting and the mixing regime of a lake can stabilize each other mutually. We attempt a quantitative approach to the contribution of chemical reactions sustaining the density stratification. As an example, we chose the prominent case of iron meromixis in Waldsee near Doebern, a small lake that originated from near-surface underground mining of lignite. From a data set covering 4 years of monthly measured electrical conductivity profiles, we calculated summed conductivity as a quantitative variable reflecting the amount of electro-active substances in the entire lake. Seasonal variations followed the changing of the chemocline height. Coinciding changes of electrical conductivities in the monimolimnion indicated that a considerable share of substances, precipitated by the advancing oxygenated epilimnion, re-dissolved in the remaining anoxic deep waters and contributed considerably to the density stratification. In addition, we designed a lab experiment, in which we removed iron compounds and organic material from monimolimnetic waters by introducing air bubbles. Precipitates could be identified by visual inspection. Eventually, the remaining solutes in the aerated water layer looked similar to mixolimnetic Waldsee water. Due to its reduced concentration of solutes, this water became less dense and remained floating on nearly unchanged monimolimnetic water. In conclusion, iron meromixis as seen in Waldsee did not require two different sources of incoming waters, but the inflow of iron-rich deep groundwater and the aeration through the lake surface were fully sufficient for the formation of iron meromixis.

MULTIGENERATIONAL ASPECTS OF SOCIAL STRATIFICATION: ISSUES FOR FURTHER RESEARCH.

Science.gov (United States)

Mare, Robert D

2014-03-01

The articles in this special issue show the vitality and progress of research on multigenerational aspects of social mobility, stratification, and inequality. The effects of the characteristics and behavior of grandparents and other kin on the statuses, resources, and positions of their descendants are best viewed in a demographic context. Intergenerational effects work through both the intergenerational associations of socioeconomic characteristics and also differential fertility and mortality. A combined socioeconomic and demographic framework informs a research agenda which addresses the following issues: how generational effects combine with variation in age, period, and cohort within each generation; distinguishing causal relationships across generations from statistical associations; how multigenerational effects vary across socioeconomic hierarchies, including the possibility of stronger effects at the extreme top and bottom; distinguishing between endowments and investments in intergenerational effects; multigenerational effects on associated demographic behaviors and outcomes (especially fertility and mortality); optimal tradeoffs among diverse types of data on multigenerational processes; and the variability across time and place in how kin, education, and other institutions affect stratification.

Viral lysis of marine microbes in relation to vertical stratification

NARCIS (Netherlands)

Mojica, K.D.A.

2015-01-01

The overall aim of this thesis is to investigate how changes in vertical stratification affect autotrophic and heterotrophic microbial communities along a meridional gradient in the Atlantic Ocean. The Northeast Atlantic Ocean is a key area in global ocean circulation and a important sink for

Thermodynamic analysis for molten stratification test MASCA with ionic liquid U-Zr-Fe-O-B-C-FPs database

International Nuclear Information System (INIS)

Fukasawa, Masanori; Tamura, Shigeyuki

2007-01-01

The molten corium stratification tested in the OECD MASCA project was analyzed with our thermo-dynamic database and the database was verified to be effective for the stratification analysis. The MASCA test shows that the molten corium can be stratified with the metal layer under the oxide when sub-oxidized corium including iron was retained in the lower head of the reactor vessel. This stratification is caused by the increased density of the metal layer attributed to a transfer of uranium metal that was reduced from uranium oxide by zirconium. Thermodynamic equilibrium calculations with the database, which was developed for the corium U-Zr-Fe-O-B-C-FPs system using the ionic two-sublattice model for liquid, show quantitative agreements with the MASCA test, such as the composition of each layer, fission product (FP) partitioning between the layers and B 4 C effect on the stratification. (author)

Thermal stratification of sodium in the BN 600 reactor

International Nuclear Information System (INIS)

Obmelukhin, J.A.; Obukhov, P.I.; Rinejskij, A.A.; Sobolev, V.A.; Sherbakov, S.I.

1983-01-01

The signs of thermal stratification of sodium in the BN 600 reactor upper plenum revealed by the analysis of standard temperature sensors' readings are defined. The initial conditions for existence of different temperature sodium layers are given. Two approaches for realizing on a computer of equations describing sodium motion in the upper plenum of the reactor are presented. (author)

Estimation for small domains in double sampling for stratification ...

African Journals Online (AJOL)

In this article, we investigate the effect of randomness of the size of a small domain on the precision of an estimator of mean for the domain under double sampling for stratification. The result shows that for a small domain that cuts across various strata with unknown weights, the sampling variance depends on the within ...

Calculation of Local Stress and Fatigue Resistance due to Thermal Stratification on Pressurized Surge Line Pipe

Science.gov (United States)

Bandriyana, B.; Utaja

2010-06-01

Thermal stratification introduces thermal shock effect which results in local stress and fatique problems that must be considered in the design of nuclear power plant components. Local stress and fatique calculation were performed on the Pressurize Surge Line piping system of the Pressurize Water Reactor of the Nuclear Power Plant. Analysis was done on the operating temperature between 177 to 343° C and the operating pressure of 16 MPa (160 Bar). The stagnant and transient condition with two kinds of stratification model has been evaluated by the two dimensional finite elements method using the ANSYS program. Evaluation of fatigue resistance is developed based on the maximum local stress using the ASME standard Code formula. Maximum stress of 427 MPa occurred at the upper side of the top half of hot fluid pipe stratification model in the transient case condition. The evaluation of the fatigue resistance is performed on 500 operating cycles in the life time of 40 years and giving the usage value of 0,64 which met to the design requirement for class 1 of nuclear component. The out surge transient were the most significant case in the localized effects due to thermal stratification.

Surface based detection schemes for molecular interferometry experiments - implications and possible applications

Science.gov (United States)

Juffmann, Thomas; Milic, Adriana; Muellneritsch, Michael; Arndt, Markus

2011-03-01

Surface based detection schemes for molecular interferometry experiments might be crucial in the search for the quantum properties of larger and larger objects since they provide single particle sensitivity. Here we report on molecular interferograms of different biomolecules imaged using fluorescence microscopy. Being able to watch the build-up of an interferogram live and in situ reveals the matter-wave behavior of these complex molecules in an unprecedented way. We examine several problems encountered due to van-der-Waals forces between the molecules and the diffraction grating and discuss possible ways to circumvent these. Especially the advent of ultra-thin (1-100 atomic layers) diffraction masks might path the way towards molecular holography. We also discuss other possible applications such as coherent molecular microscopy.

Absence of internal tidal beams due to non-uniform stratification

NARCIS (Netherlands)

Gerkema, T.; van Haren, H.

2012-01-01

A linear internal-tide generation model is applied to the Faeroe–Shetland Channel, using observed profiles of stratification. Several degrees of simplification are considered: 1) uniform, i.e. constant N; 2) vertically varying N (z); 3) the full N(x, z) and associated geostrophic background flows.

DEM Simulation of Particle Stratification and Segregation in Stockpile Formation

Directory of Open Access Journals (Sweden)

Zhang Dizhe

2017-01-01

Full Text Available Granular stockpiles are commonly observed in nature and industry, and their formation has been extensively investigated experimentally and mathematically in the literature. One of the striking features affecting properties of stockpiles are the internal patterns formed by the stratification and segregation processes. In this work, we conduct a numerical study based on DEM (discrete element method model to study the influencing factors and triggering mechanisms of these two phenomena. With the use of a previously developed mixing index, the effects of parameters including size ratio, injection height and mass ratio are investigated. We found that it is a void-filling mechanism that differentiates the motions of particles with different sizes. This mechanism drives the large particles to flow over the pile surface and segregate at the pile bottom, while it also pushes small particles to fill the voids between large particles, giving rise to separate layers. Consequently, this difference in motion will result in the observed stratification and segregation phenomena.

Study of thermal stratification and mixing using PIV

International Nuclear Information System (INIS)

Yamaji, B.; Szijarto, R.; Aszodi, A.

2010-01-01

Paks Nuclear Power Plant uses the REMIX code for the calculation of the coolant mixing in case of the use of high pressure injection system while stagnating flow is present. The use of the code for Russian type WWER-440 reactors needs strict conservative approach, and in several cases the accuracy and the reserves to safety margins cannot be determined now. In order to quantify and improve these characteristics experimental validation of the code is needed. An experimental program has been launched at Institute of Nuclear Techniques with the aim of investigating thermal stratification processes and the mixing of plumes in simple geometries. With the comparison and evaluation of measurement and computational fluid dynamics result computational models can be validated. For the experiments a simple hexahedral plexiglas tank (250 x 500 x 100 mm - H x L x D) was fabricated with five nozzles attached, which can be set up as inlets or outlets. With different inlet and outlet setups and temperature differences thermal stratification, plume mixing may be investigated using Particle Image Velocimetry. In the paper comparison of Particle Image Velocimetry measurements carried out on the plexiglas tank and the results of simulations will be presented. For the calculations the ANSYS CFX three-dimensional computational fluid dynamics code was used. (Authors)

The influence of temperature stratification on the thermal performance of a dry cooling tower with natural draught

International Nuclear Information System (INIS)

Buxmann, J.

1977-01-01

The cooling effect of a cooling tower is noticeably changed, if in its surroundings there exists a temperature stratification which is different from the adiabatic temperature stratification. The design data are investigated which have an influence on the heat rating and the total temperature difference at various temperature gradients in the air. (orig.) [de

Qinshan phase II extension nuclear power project thermal stratification and fatigue stress analysis for pressurizer surge line

International Nuclear Information System (INIS)

Yu Xiaofei; Zhang Yixiong; Ai Honglei

2010-01-01

Thermal stratification of pressurizer surge line induced by the inside fluid brings on global bending moments, local thermal stresses, unexpected displacements and support loadings of the pipe system. In order to avoid a costly three-dimensional computation, a combined 1D/2D technique has been developed and implemented to analyze the thermal stratification and fatigue stress of pressurize surge line of QINSHAN Phase II Extension Nuclear Power Project in this paper, using the computer codes SYSTUS and ROCOCO. According to the mechanical analysis results of stratification, the maximum stress and cumulative usage factor, the loadings at connections of surge line to main pipe and RCP and the displacements of surge line at supports are obtained. (authors)

Vertical stratification of bat assemblages in flooded and unflooded Amazonian forests

Directory of Open Access Journals (Sweden)

Maria João Ramos PEREIRA, João Tiago MARQUES, Jorge M. PALMEIRIM

2010-08-01

Full Text Available Tropical rainforests usually have multiple strata that results in a vertical stratification of ecological opportunities for animals. We investigated if this stratification influences the way bats use the vertical space in flooded and unflooded forests of the Central Amazon. Using mist-nets set in the canopy (17 to 35 m high and in the understorey (0 to 3 m high we sampled four sites in upland unflooded forests (terra firme, three in forests seasonally flooded by nutrient-rich water (várzea, and three in forests seasonally flooded by nutrient-poor water (igapó. Using rarefaction curves we found that species richness in the understorey and canopy were very similar. An ordination analysis clearly separated the bat assemblages of the canopy from those of the understorey in both flooded and unflooded habitats. Gleaning carnivores were clearly associated with the understorey, whereas frugivores were abundant in both strata. Of the frugivores, Carollinae and some Stenodermatinae were understorey specialists, but several Stenodermatinae mostly used the canopy. The first group mainly includes species that, in general, feed on fruits of understorey shrubs, whereas the second group feed on figs and other canopy fruits. We conclude that vertical stratification in bat communities occurs even within forests with lower canopy heights, such as Amazonian seasonally flooded forests, and that the vertical distribution of bat species is closely related to their diet and foraging behaviour [Current Zoology 56 (4: 469–478, 2010].

Coherent structure in geostrophic flow under density stratification; Mippei seisoka ni aru chikoryu no soshiki kozo

Energy Technology Data Exchange (ETDEWEB)

Tsujimura, S.; Iida, O.; Nagano, Y. [Nagoya Institute of Technology, Nagoya (Japan)

1998-10-25

The coherent structure and relevant heat transport in geostrophic flows under various density stratification has been studied by using both direct numerical simulation and rapid distortion theory. It is found that in a neutrally stratified flow under system rotation, the temperature fluctuations become very close to two-dimensional and their variation is very small in the direction parallel to the axis of rotation. Under the stable stratification, the velocity and temperature fluctuations tend to oscillate with the Brunt-Vaisala frequency. Under the unstable stratification, on the other hand, vortex columns are formed in the direction parallel to the axis of rotation. However, the generation of the elongated vortex columns cannot be predicted by the rapid distortion theory. The non-linear term is required to generate these characteristic vortex columns. 11 refs., 18 figs., 1 tab.

Comprehensive molecular characterization of gastric adenocarcinoma

Science.gov (United States)

Bass, Adam J.; Thorsson, Vesteinn; Shmulevich, Ilya; Reynolds, Sheila M.; Miller, Michael; Bernard, Brady; Hinoue, Toshinori; Laird, Peter W.; Curtis, Christina; Shen, Hui; Weisenberger, Daniel J.; Schultz, Nikolaus; Shen, Ronglai; Weinhold, Nils; Kelsen, David P.; Bowlby, Reanne; Chu, Andy; Kasaian, Katayoon; Mungall, Andrew J.; Robertson, A. Gordon; Sipahimalani, Payal; Cherniack, Andrew; Getz, Gad; Liu, Yingchun; Noble, Michael S.; Pedamallu, Chandra; Sougnez, Carrie; Taylor-Weiner, Amaro; Akbani, Rehan; Lee, Ju-Seog; Liu, Wenbin; Mills, Gordon B.; Yang, Da; Zhang, Wei; Pantazi, Angeliki; Parfenov, Michael; Gulley, Margaret; Piazuelo, M. Blanca; Schneider, Barbara G.; Kim, Jihun; Boussioutas, Alex; Sheth, Margi; Demchok, John A.; Rabkin, Charles S.; Willis, Joseph E.; Ng, Sam; Garman, Katherine; Beer, David G.; Pennathur, Arjun; Raphael, Benjamin J.; Wu, Hsin-Ta; Odze, Robert; Kim, Hark K.; Bowen, Jay; Leraas, Kristen M.; Lichtenberg, Tara M.; Weaver, Stephanie; McLellan, Michael; Wiznerowicz, Maciej; Sakai, Ryo; Getz, Gad; Sougnez, Carrie; Lawrence, Michael S.; Cibulskis, Kristian; Lichtenstein, Lee; Fisher, Sheila; Gabriel, Stacey B.; Lander, Eric S.; Ding, Li; Niu, Beifang; Ally, Adrian; Balasundaram, Miruna; Birol, Inanc; Bowlby, Reanne; Brooks, Denise; Butterfield, Yaron S. N.; Carlsen, Rebecca; Chu, Andy; Chu, Justin; Chuah, Eric; Chun, Hye-Jung E.; Clarke, Amanda; Dhalla, Noreen; Guin, Ranabir; Holt, Robert A.; Jones, Steven J.M.; Kasaian, Katayoon; Lee, Darlene; Li, Haiyan A.; Lim, Emilia; Ma, Yussanne; Marra, Marco A.; Mayo, Michael; Moore, Richard A.; Mungall, Andrew J.; Mungall, Karen L.; Nip, Ka Ming; Robertson, A. Gordon; Schein, Jacqueline E.; Sipahimalani, Payal; Tam, Angela; Thiessen, Nina; Beroukhim, Rameen; Carter, Scott L.; Cherniack, Andrew D.; Cho, Juok; Cibulskis, Kristian; DiCara, Daniel; Frazer, Scott; Fisher, Sheila; Gabriel, Stacey B.; Gehlenborg, Nils; Heiman, David I.; Jung, Joonil; Kim, Jaegil; Lander, Eric S.; Lawrence, Michael S.; Lichtenstein, Lee; Lin, Pei; Meyerson, Matthew; Ojesina, Akinyemi I.; Pedamallu, Chandra Sekhar; Saksena, Gordon; Schumacher, Steven E.; Sougnez, Carrie; Stojanov, Petar; Tabak, Barbara; Taylor-Weiner, Amaro; Voet, Doug; Rosenberg, Mara; Zack, Travis I.; Zhang, Hailei; Zou, Lihua; Protopopov, Alexei; Santoso, Netty; Parfenov, Michael; Lee, Semin; Zhang, Jianhua; Mahadeshwar, Harshad S.; Tang, Jiabin; Ren, Xiaojia; Seth, Sahil; Yang, Lixing; Xu, Andrew W.; Song, Xingzhi; Pantazi, Angeliki; Xi, Ruibin; Bristow, Christopher A.; Hadjipanayis, Angela; Seidman, Jonathan; Chin, Lynda; Park, Peter J.; Kucherlapati, Raju; Akbani, Rehan; Ling, Shiyun; Liu, Wenbin; Rao, Arvind; Weinstein, John N.; Kim, Sang-Bae; Lee, Ju-Seog; Lu, Yiling; Mills, Gordon; Laird, Peter W.; Hinoue, Toshinori; Weisenberger, Daniel J.; Bootwalla, Moiz S.; Lai, Phillip H.; Shen, Hui; Triche, Timothy; Van Den Berg, David J.; Baylin, Stephen B.; Herman, James G.; Getz, Gad; Chin, Lynda; Liu, Yingchun; Murray, Bradley A.; Noble, Michael S.; Askoy, B. Arman; Ciriello, Giovanni; Dresdner, Gideon; Gao, Jianjiong; Gross, Benjamin; Jacobsen, Anders; Lee, William; Ramirez, Ricardo; Sander, Chris; Schultz, Nikolaus; Senbabaoglu, Yasin; Sinha, Rileen; Sumer, S. Onur; Sun, Yichao; Weinhold, Nils; Thorsson, Vésteinn; Bernard, Brady; Iype, Lisa; Kramer, Roger W.; Kreisberg, Richard; Miller, Michael; Reynolds, Sheila M.; Rovira, Hector; Tasman, Natalie; Shmulevich, Ilya; Ng, Santa Cruz Sam; Haussler, David; Stuart, Josh M.; Akbani, Rehan; Ling, Shiyun; Liu, Wenbin; Rao, Arvind; Weinstein, John N.; Verhaak, Roeland G.W.; Mills, Gordon B.; Leiserson, Mark D. M.; Raphael, Benjamin J.; Wu, Hsin-Ta; Taylor, Barry S.; Black, Aaron D.; Bowen, Jay; Carney, Julie Ann; Gastier-Foster, Julie M.; Helsel, Carmen; Leraas, Kristen M.; Lichtenberg, Tara M.; McAllister, Cynthia; Ramirez, Nilsa C.; Tabler, Teresa R.; Wise, Lisa; Zmuda, Erik; Penny, Robert; Crain, Daniel; Gardner, Johanna; Lau, Kevin; Curely, Erin; Mallery, David; Morris, Scott; Paulauskis, Joseph; Shelton, Troy; Shelton, Candace; Sherman, Mark; Benz, Christopher; Lee, Jae-Hyuk; Fedosenko, Konstantin; Manikhas, Georgy; Potapova, Olga; Voronina, Olga; Belyaev, Smitry; Dolzhansky, Oleg; Rathmell, W. Kimryn; Brzezinski, Jakub; Ibbs, Matthew; Korski, Konstanty; Kycler, Witold; ŁaŸniak, Radoslaw; Leporowska, Ewa; Mackiewicz, Andrzej; Murawa, Dawid; Murawa, Pawel; Spychała, Arkadiusz; Suchorska, Wiktoria M.; Tatka, Honorata; Teresiak, Marek; Wiznerowicz, Maciej; Abdel-Misih, Raafat; Bennett, Joseph; Brown, Jennifer; Iacocca, Mary; Rabeno, Brenda; Kwon, Sun-Young; Penny, Robert; Gardner, Johanna; Kemkes, Ariane; Mallery, David; Morris, Scott; Shelton, Troy; Shelton, Candace; Curley, Erin; Alexopoulou, Iakovina; Engel, Jay; Bartlett, John; Albert, Monique; Park, Do-Youn; Dhir, Rajiv; Luketich, James; Landreneau, Rodney; Janjigian, Yelena Y.; Kelsen, David P.; Cho, Eunjung; Ladanyi, Marc; Tang, Laura; McCall, Shannon J.; Park, Young S.; Cheong, Jae-Ho; Ajani, Jaffer; Camargo, M. Constanza; Alonso, Shelley; Ayala, Brenda; Jensen, Mark A.; Pihl, Todd; Raman, Rohini; Walton, Jessica; Wan, Yunhu; Demchok, John A.; Eley, Greg; Mills Shaw, Kenna R.; Sheth, Margi; Tarnuzzer, Roy; Wang, Zhining; Yang, Liming; Zenklusen, Jean Claude; Davidsen, Tanja; Hutter, Carolyn M.; Sofia, Heidi J.; Burton, Robert; Chudamani, Sudha; Liu, Jia

2014-01-01

Gastric cancer is a leading cause of cancer deaths, but analysis of its molecular and clinical characteristics has been complicated by histological and aetiological heterogeneity. Here we describe a comprehensive molecular evaluation of 295 primary gastric adenocarcinomas as part of The Cancer Genome Atlas (TCGA) project. We propose a molecular classification dividing gastric cancer into four subtypes: tumours positive for Epstein–Barr virus, which display recurrent PIK3CA mutations, extreme DNA hypermethylation, and amplification of JAK2, CD274 (also known as PD-L1) and PDCD1LG2 (also knownasPD-L2); microsatellite unstable tumours, which show elevated mutation rates, including mutations of genes encoding targetable oncogenic signalling proteins; genomically stable tumours, which are enriched for the diffuse histological variant and mutations of RHOA or fusions involving RHO-family GTPase-activating proteins; and tumours with chromosomal instability, which show marked aneuploidy and focal amplification of receptor tyrosine kinases. Identification of these subtypes provides a roadmap for patient stratification and trials of targeted therapies. PMID:25079317

Ordinary differential equations with applications in molecular biology.

Science.gov (United States)

Ilea, M; Turnea, M; Rotariu, M

2012-01-01

Differential equations are of basic importance in molecular biology mathematics because many biological laws and relations appear mathematically in the form of a differential equation. In this article we presented some applications of mathematical models represented by ordinary differential equations in molecular biology. The vast majority of quantitative models in cell and molecular biology are formulated in terms of ordinary differential equations for the time evolution of concentrations of molecular species. Assuming that the diffusion in the cell is high enough to make the spatial distribution of molecules homogenous, these equations describe systems with many participating molecules of each kind. We propose an original mathematical model with small parameter for biological phospholipid pathway. All the equations system includes small parameter epsilon. The smallness of epsilon is relative to the size of the solution domain. If we reduce the size of the solution region the same small epsilon will result in a different condition number. It is clear that the solution for a smaller region is less difficult. We introduce the mathematical technique known as boundary function method for singular perturbation system. In this system, the small parameter is an asymptotic variable, different from the independent variable. In general, the solutions of such equations exhibit multiscale phenomena. Singularly perturbed problems form a special class of problems containing a small parameter which may tend to zero. Many molecular biology processes can be quantitatively characterized by ordinary differential equations. Mathematical cell biology is a very active and fast growing interdisciplinary area in which mathematical concepts, techniques, and models are applied to a variety of problems in developmental medicine and bioengineering. Among the different modeling approaches, ordinary differential equations (ODE) are particularly important and have led to significant advances

Degree of Agreement between Cardiovascular Risk Stratification Tools.

Science.gov (United States)

Garcia, Guilherme Thomé; Stamm, Ana Maria Nunes de Faria; Rosa, Ariel Córdova; Marasciulo, Antônio Carlos; Marasciulo, Rodrigo Conill; Battistella, Cristian; Remor, Alexandre Augusto de Costa

2017-05-01

Cardiovascular disease (CVD) is the leading cause of morbidity and mortality in Brazil, and primary prevention care may be guided by risk stratification tools. The Framingham (FRS) and QRISK-2 (QRS) risk scores estimate 10-year overall cardiovascular risk in asymptomatic individuals, but the instrument of choice may lead to different therapeutic strategies. To evaluate the degree of agreement between FRS and QRS in 10-year overall cardiovascular risk stratification in disease-free individuals. Cross-sectional, observational, descriptive and analytical study in a convenience sample of 74 individuals attending the outpatient care service of a university hospital in Brazil between January 2014 and January 2015. After application of FRS and QRS, patients were classified in low/moderate risk (Brasil, e a prevenção primária pode ser direcionada com ferramentas que estratificam o risco. Os escores de Framingham (ERF) e QRISK-2 (ERQ) estimam o risco cardiovascular (RCV) global em 10 anos em indivíduos assintomáticos, mas a escolha do instrumento pode implicar em terapêuticas distintas. Observar o grau de concordância entre o ERF e o ERQ, na estratificação do risco cardiovascular global em 10 anos, nos indivíduos livres da doença. Estudo transversal, observacional, descritivo e analítico, com uma amostra de conveniência de 74 indivíduos, atendidos em um ambulatório de ensino de um hospital universitário brasileiro, no sul do país, de janeiro de 2014 a janeiro de 2015. O ERF e o ERQ foram aplicados nos pacientes, que foram classificados em baixo/moderado (superior no ERF que no ERQ (33,7% vs 21,6%), sendo identificado efeito sinérgico do gênero masculino com hipertensão arterial sistêmica nas duas ferramentas, e com faixa etária geriátrica no ERQ (p < 0,05) nesse estrato de risco. O índice de concordância Kappa entre os dois escores foi igual a 0,519 (IC95% = 0,386-0,652; p < 0,001). Houve concordância moderada entre o ERF e o ERQ, na estimativa de

Synthesis and application of magnetic molecularly imprinted polymers in sample preparation.

Science.gov (United States)

Huang, Shuyao; Xu, Jianqiao; Zheng, Jiating; Zhu, Fang; Xie, Lijun; Ouyang, Gangfeng

2018-04-12

Magnetic molecularly imprinted polymers (MMIPs) have superior advantages in sample pretreatment because of their high selectivity for target analytes and the fast and easy isolation from samples. To meet the demand of both good magnetic property and good extraction performance, MMIPs with various structures, from traditional core-shell structures to novel composite structures with a larger specific surface area and more accessible binding sites, are fabricated by different preparation technologies. Moreover, as the molecularly imprinted polymer (MIP) layers determine the affinity, selectivity, and saturated adsorption amount of MMIPs, the development and innovation of the MIP layer are attracting attention and are reviewed here. Many studies that used MMIPs as sorbents in dispersive solid-phase extraction of complex samples, including environmental, food, and biofluid samples, are summarized. Graphical abstract The application of magnetic molecularly imprinted polymers (MIPs) in the sample preparation procedure improves the analytical performances for complex samples. MITs molecular imprinting technologies.

Preconditioning of Antarctic maximum sea-ice extent by upper-ocean stratification on a seasonal timescale

OpenAIRE

Su, Zhan

2017-01-01

This study uses an observationally constrained and dynamically consistent ocean and sea ice state estimate. The author presents a remarkable agreement between the location of the edge of Antarctic maximum sea ice extent, reached in September, and the narrow transition band for the upper ocean (0–100 m depths) stratification, as early as April to June. To the south of this edge, the upper ocean has high stratification, which forbids convective fluxes to cross through; consequently, the ocean h...

Simulation of containment atmosphere stratification experiment using local instantaneous description

International Nuclear Information System (INIS)

Babic, M.; Kljenak, I.

2004-01-01

An experiment on mixing and stratification in the atmosphere of a nuclear power plant containment at accident conditions was simulated with the CFD code CFX4.4. The original experiment was performed in the TOSQAN experimental facility. Simulated nonhomogeneous temperature, species concentration and velocity fields are compared to experimental results. (author)

Understanding the impact of career academy attendance: an application of the principal stratification framework for causal effects accounting for partial compliance.

Science.gov (United States)

Page, Lindsay C

2012-04-01

Results from MDRC's longitudinal, random-assignment evaluation of career-academy high schools reveal that several years after high-school completion, those randomized to receive the academy opportunity realized a $175 (11%) increase in monthly earnings, on average. In this paper, I investigate the impact of duration of actual academy enrollment, as nearly half of treatment group students either never enrolled or participated for only a portion of high school. I capitalize on data from this experimental evaluation and utilize a principal stratification framework and Bayesian inference to investigate the causal impact of academy participation. This analysis focuses on a sample of 1,306 students across seven sites in the MDRC evaluation. Participation is measured by number of years of academy enrollment, and the outcome of interest is average monthly earnings in the period of four to eight years after high school graduation. I estimate an average causal effect of treatment assignment on subsequent monthly earnings of approximately $588 among males who remained enrolled in an academy throughout high school and more modest impacts among those who participated only partially. Different from an instrumental variables approach to treatment non-compliance, which allows for the estimation of linear returns to treatment take-up, the more general framework of principal stratification allows for the consideration of non-linear returns, although at the expense of additional model-based assumptions.

Translational Applications of Molecular Imaging and Radionuclide Therapy

International Nuclear Information System (INIS)

Welch, Michael J.; Eckelman, William C.; Vera, David

2005-01-01

Molecular imaging is becoming a larger part of imaging research and practice. The Office of Biological and Environmental Research of the Department of Energy funds a significant number of researchers in this area. The proposal is to partially fund a workshop to inform scientists working in nuclear medicine and nuclear medicine practitioners of the recent advances of molecular imaging in nuclear medicine as well as other imaging modalities. A limited number of topics related to radionuclide therapy will also be discussed. The proposal is to request partial funds for the workshop entitled ''Translational Applications of Molecular Imaging and Radionuclide Therapy'' to be held prior to the Society of Nuclear Medicine Annual Meeting in Toronto, Canada in June 2005. The meeting will be held on June 17-18. This will allow scientists interested in all aspects of nuclear medicine imaging to attend. The chair of the organizing group is Dr. Michael J. Welch. The organizing committee consists of Dr. Welch, Dr. William C. Eckelman and Dr. David Vera. The goal is to invite speakers to discuss the most recent advances of modern molecular imaging and therapy. Speakers will present advances made in in vivo tagging imaging assays, technical aspects of small animal imaging, in vivo imaging and bench to bedside translational study; and the role of a diagnostic scan on therapy selection. This latter topic will include discussions on therapy and new approaches to dosimetry. Several of these topics are those funded by the Department of Energy Office of Biological and Environmental Research

Effects of moist cold stratification on germination, plant growth regulators, metabolites and embryo ultrastructure in seeds of Acer morrisonense (Sapindaceae).

Science.gov (United States)

Chen, Shun-Ying; Chou, Shih-Han; Tsai, Ching-Chu; Hsu, Wen-Yu; Baskin, Carol C; Baskin, Jerry M; Chien, Ching-Te; Kuo-Huang, Ling-Long

2015-09-01

Breaking of seed dormancy by moist cold stratification involves complex interactions in cells. To assess the effect of moist cold stratification on dormancy break in seeds of Acer morrisonense, we monitored percentages and rates of germination and changes in plant growth regulators, sugars, amino acids and embryo ultrastructure after various periods of cold stratification. Fresh seeds incubated at 25/15 °C for 24 weeks germinated to 61%, while those cold stratified at 5 °C for 12 weeks germinated to 87% in 1 week. Neither exogenous GA3 nor GA4 pretreatment significantly increased final seed germination percentage. Total ABA content of seeds cold stratified for 12 weeks was reduced about 3.3-fold, to a concentration similar to that in germinated seeds (radicle emergence). Endogenous GA3 and GA7 were detected in 8-week and 12-week cold stratified seeds but not in fresh seeds. Numerous protein and lipid bodies were present in the plumule, first true leaves and cotyledons of fresh seeds. Protein and lipid bodies decreased greatly during cold stratification, and concentrations of total soluble sugars and amino acids increased. The major non-polar sugars in fresh seeds were sucrose and fructose, but sucrose increased and fructose decreased significantly during cold stratification. The major free amino acids were proline and tryptophan in fresh seeds, and proline increased and tryptophan decreased during cold stratification. Thus, as dormancy break occurs during cold stratification seeds of A. morrisonense undergo changes in plant growth regulators, proteins, lipids, sugars, amino acids and cell ultrastructure. Copyright © 2015 Elsevier Masson SAS. All rights reserved.

Application of Next-generation Sequencing in Clinical Molecular Diagnostics

Directory of Open Access Journals (Sweden)

Morteza Seifi

2017-05-01

Full Text Available ABSTRACT Next-generation sequencing (NGS is the catch all terms that used to explain several different modern sequencing technologies which let us to sequence nucleic acids much more rapidly and cheaply than the formerly used Sanger sequencing, and as such have revolutionized the study of molecular biology and genomics with excellent resolution and accuracy. Over the past years, many academic companies and institutions have continued technological advances to expand NGS applications from research to the clinic. In this review, the performance and technical features of current NGS platforms were described. Furthermore, advances in the applying of NGS technologies towards the progress of clinical molecular diagnostics were emphasized. General advantages and disadvantages of each sequencing system are summarized and compared to guide the selection of NGS platforms for specific research aims.

Signature molecular descriptor : advanced applications.

Energy Technology Data Exchange (ETDEWEB)

Visco, Donald Patrick, Jr. (Tennessee Technological University, Cookeville, TN)

2010-04-01

In this work we report on the development of the Signature Molecular Descriptor (or Signature) for use in the solution of inverse design problems as well as in highthroughput screening applications. The ultimate goal of using Signature is to identify novel and non-intuitive chemical structures with optimal predicted properties for a given application. We demonstrate this in three studies: green solvent design, glucocorticoid receptor ligand design and the design of inhibitors for Factor XIa. In many areas of engineering, compounds are designed and/or modified in incremental ways which rely upon heuristics or institutional knowledge. Often multiple experiments are performed and the optimal compound is identified in this brute-force fashion. Perhaps a traditional chemical scaffold is identified and movement of a substituent group around a ring constitutes the whole of the design process. Also notably, a chemical being evaluated in one area might demonstrate properties very attractive in another area and serendipity was the mechanism for solution. In contrast to such approaches, computer-aided molecular design (CAMD) looks to encompass both experimental and heuristic-based knowledge into a strategy that will design a molecule on a computer to meet a given target. Depending on the algorithm employed, the molecule which is designed might be quite novel (re: no CAS registration number) and/or non-intuitive relative to what is known about the problem at hand. While CAMD is a fairly recent strategy (dating to the early 1980s), it contains a variety of bottlenecks and limitations which have prevented the technique from garnering more attention in the academic, governmental and industrial institutions. A main reason for this is how the molecules are described in the computer. This step can control how models are developed for the properties of interest on a given problem as well as how to go from an output of the algorithm to an actual chemical structure. This report

Risk stratification in non-ST elevation acute coronary syndromes: Risk scores, biomarkers and clinical judgment

Directory of Open Access Journals (Sweden)

David Corcoran

2015-09-01

Clinical guidelines recommend an early invasive strategy in higher risk NSTE-ACS. The Global Registry of Acute Coronary Events (GRACE risk score is a validated risk stratification tool which has incremental prognostic value for risk stratification compared with clinical assessment or troponin testing alone. In emergency medicine, there has been a limited adoption of the GRACE score in some countries (e.g. United Kingdom, in part related to a delay in obtaining timely blood biochemistry results. Age makes an exponential contribution to the GRACE score, and on an individual patient basis, the risk of younger patients with a flow-limiting culprit coronary artery lesion may be underestimated. The future incorporation of novel cardiac biomarkers into this diagnostic pathway may allow for earlier treatment stratification. The cost-effectiveness of the new diagnostic pathways based on high-sensitivity troponin and copeptin must also be established. Finally, diagnostic tests and risk scores may optimize patient care but they cannot replace patient-focused good clinical judgment.

Environmental Assisted Fatigue Evaluation of Direct Vessel Injection Piping Considering Thermal Stratification

International Nuclear Information System (INIS)

Kim, Taesoon; Lee, Dohwan

2016-01-01

As the environmentally assisted fatigue (EAF) due to the primary water conditions is to be a critical issue, the fatigue evaluation for the components and pipes exposed to light water reactor coolant conditions has become increasingly important. Therefore, many studies to evaluate the fatigue life of the components and pipes in LWR coolant environments on fatigue life of materials have been conducted. Among many components and pipes of nuclear power plants, the direct vessel injection piping is known to one of the most vulnerable pipe systems because of thermal stratification occurred in that systems. Thermal stratification occurs because the density of water changes significantly with temperature. In this study, fatigue analysis for DVI piping using finite element analysis has been conducted and those results showed that the results met design conditions related with the environmental fatigue evaluation of safety class 1 pipes in nuclear power plants. Structural and fatigue integrity for the DVI piping system that thermal stratification occurred during the plant operation has conducted. First of all, thermal distribution of the piping system is calculated by computational fluid dynamic analysis to analyze the structural integrity of that piping system. And the fatigue life evaluation considering environmental effects was carried out. Our results showed that the DVI piping system had enough structural integrity and fatigue life during the design lifetime of 60 years

Fluid-structure interaction analysis for pressurizer surge line subjected to thermal stratification

International Nuclear Information System (INIS)

Kang, Dong Gu; Jhung, Myung Jo; Chang, Soon Heung

2011-01-01

Research highlights: → Temperature of surge line due to stratified flow is defined using CFD analysis. → Fluid-structure interaction analysis is performed to investigate the response characteristics due to thermal stress. → Fatigue usage factors due to thermal stratification are relatively low. → Simplifying temperature distribution in surge line is not always conservative. - Abstract: Serious mechanical damages such as cracks and plastic deformations due to excessive thermal stress caused by thermal stratification have been experienced in several nuclear power plants. In particular, the thermal stratification in the pressurizer surge line has been addressed as one of the significant safety and technical issues. In this study, a detailed unsteady computational fluid dynamics (CFD) analysis involving conjugate heat transfer analysis is performed to obtain the transient temperature distributions in the wall of the pressurizer surge line subjected to stratified internal flows either during out-surge or in-surge operation. The thermal loads from CFD calculations are transferred to the structural analysis code which is employed for the thermal stress analysis to investigate the response characteristics, and the fatigue analysis is ultimately performed. In addition, the thermal stress and fatigue analysis results obtained by applying the realistic temperature distributions from CFD calculations are compared with those by assuming the simplified temperature distributions to identify some requirements for a realistic and conservative thermal stress analysis from a safety point of view.

Molecularly thin fluoro-polymeric nanolubricant films: tribology, rheology, morphology, and applications.

Science.gov (United States)

Chung, Pil Seung; Jhon, Myung S; Choi, Hyoung Jin

2016-03-21

Molecularly thin perfluoropolyether (PFPE) has been used extensively as a high-performance lubricant in various applications and, more importantly, on carbon overcoats to enhance the reliability and lubrication of micro-/nanoelectro-mechanical systems, where the tribological performance caused by its molecular architecture is a critical issue, as are its physical properties and rheological characteristics. This Highlight addresses recent trends in the development of fluoro-polymeric lubricant films with regard to their tribology, rheology, and physio-chemical properties as they relate to heat-assisted magnetic recording. Nanorheology has been employed to examine the dynamic response of nonfunctional and functional PFPEs, while the viscoelastic properties of nanoscale PFPE films and the relaxation processes as a function of molecular structure and end-group functionality were analyzed experimentally; furthermore, the characteristics of binary blends were reported.

Modelling the tides and their impacts on the vertical stratification ...

African Journals Online (AJOL)

The Sofala Bank, a wide shelf located along the central coast of Mozambique, hosts tides with high amplitudes. The Regional Ocean Modelling System (ROMS) was used to analyse the tidal currents on the bank and to investigate their effects on the stratification and generation of tidal fronts. During spring tides, barotropic ...

Prognostic Stratification of Patients With Advanced Oral Cavity Squamous Cell Carcinoma.

Science.gov (United States)

De Paz, Dante; Kao, Huang-Kai; Huang, Yenlin; Chang, Kai-Ping

2017-08-10

Prognosis of advanced oral squamous cell carcinoma remains a challenge for clinicians despite progress in its diagnosis and treatment over the past decades. In this review, we assessed clinicopathological factors and potential biomarkers along with their prognostic relevance in an attempt to develop optimal treatment strategies for these patients. In addition to several pathologic factors that have been proposed to improve prognostic stratification and treatment planning in the eighth edition of the American Joint Committee staging manual on cancer, we reviewed some other imaging and clinicopathological parameters demonstrated to be closely associated with patient prognosis, along with the biomarkers related to novel target or immune therapy. Evaluation of current literature regarding the prognostic stratification used in contemporary clinicopathological studies and progress in the development of targeted or immune therapy may help these patients benefit from tailored and personalized treatment and obtain better oncological results.

[The stratification of moisture content and its dynamics in co-composting of sewage sludge and pig manure].

Science.gov (United States)

Luo, Wei; Chen, Tong-bin; Gao, Ding; Zheng, Yu-qi; Zheng, Guo-di

2004-03-01

The experiment of co-composting of sewage sludge and pig manure was studied. The moisture contents were 50.82%-60.87% at the stage of temperature rising and 38.7%-52.17% at the stage of thermophilic fermentation, and the stratification of moisture content were not obvious for both stages because the door, the internal wall and the depth of the composting bay had little effect on the stratification. At the stage of cooling, the moisture content was 24.54%-49.39%, and the stratification of moisture content was remarkable as the door, the internal wall and the depth of the composting bay had great influence on it. At the stage of maturity, the moisture content was 19.18%-49.34%, and the stratification of moisture weakened, for which the door and the internal wall were mainly responsible. At the different composting stage, the degree of difference of moisture content on the profiles of the pile was of the order: maturity stage > cooling stage > thermophilic stage = temperature rising stage, and the moisture content in the pile was as follows: the lower > the middle > the upper. The relation between moisture content and composting time meeted with two-order kinetics equation.

A numerical analysis on thermal stratification phenomenon in the SCS piping

International Nuclear Information System (INIS)

Kim, Kwang Chu; Park, Man Heung; Youm, Hag Ki; Lee, Sun Ki; Kim, Tae Ryong

2003-01-01

A numerical study is performed to estimate on an unsteady thermal stratification phenomenon in the Shutdown Cooling System(SCS) piping branched off the Reactor Coolant System(RCS) piping of Nuclear Power Plant. In the results, turbulent penetration reaches to the 1 st isolation valve. At 500sec, the maximum temperature difference between top and bottom inner wall in piping is observed at the starting point of horizontal piping passing elbow. The temperature of coolant in the rear side of the 1 st isolation valve disk is very slowly increased and the inflection point in temperature difference curve for time is observed at 2700sec. At the beginning of turbulent penetration from RCS piping, the fast inflow generates the higher temperature for the inner wall than the outer wall in the SCS piping. In the case the hot-leg injection piping and the drain piping are connected to the SCS piping, the effect of thermal stratification in the SCS piping is decreased due to an increase of heat loss compared with no connection case. The hot-leg injection piping affected by turbulent penetration from the SCS piping has a severe temperature difference that exceeds criterion temperature stated in reference. But the drain piping located in the rear compared with the hot-leg injection piping shows a tiny temperature difference. In a viewpoint of designer, for the purpose of decreasing the thermal stratification effect, it is necessary to increase the length of vertical piping in the SCS piping, and to move the position of the hot-leg injection piping backward

Effect of optimum stratification on sampling with varying probabilities under proportional allocation

Directory of Open Access Journals (Sweden)

Syed Ejaz Husain Rizvi

2007-10-01

Full Text Available The problem of optimum stratification on an auxiliary variable when the units from different strata are selected with probability proportional to the value of auxiliary variable (PPSWR was considered by Singh (1975 for univariate case. In this paper we have extended the same problem, for proportional allocation, when two variates are under study. A cum. 3 R3(x rule for obtaining approximately optimum strata boundaries has been provided. It has been shown theoretically as well as empirically that the use of stratification has inverse effect on the relative efficiency of PPSWR as compared to unstratified PPSWR method when proportional method of allocation is envisaged. Further comparison showed that with increase in number of strata the stratified simple random sampling is equally efficient as PPSWR.

Validating a Local Failure Risk Stratification for Use in Prospective Studies of Adjuvant Radiation Therapy for Bladder Cancer

International Nuclear Information System (INIS)

Baumann, Brian C.; He, Jiwei; Hwang, Wei-Ting; Tucker, Kai N.; Bekelman, Justin E.; Herr, Harry W.; Lerner, Seth P.; Guzzo, Thomas J.; Malkowicz, S. Bruce; Christodouleas, John P.

2016-01-01

Purpose: To inform prospective trials of adjuvant radiation therapy (adj-RT) for bladder cancer after radical cystectomy, a locoregional failure (LF) risk stratification was proposed. This stratification was developed and validated using surgical databases that may not reflect the outcomes expected in prospective trials. Our purpose was to assess sources of bias that may affect the stratification model's validity or alter the LF risk estimates for each subgroup: time bias due to evolving surgical techniques; trial accrual bias due to inclusion of patients who would be ineligible for adj-RT trials because of early disease progression, death, or loss to follow-up shortly after cystectomy; bias due to different statistical methods to estimate LF; and subgrouping bias due to different definitions of the LF subgroups. Methods and Materials: The LF risk stratification was developed using a single-institution cohort (n=442, 1990-2008) and the multi-institutional SWOG 8710 cohort (n=264, 1987-1998) treated with radical cystectomy with or without chemotherapy. We evaluated the sensitivity of the stratification to sources of bias using Fine-Gray regression and Kaplan-Meier analyses. Results: Year of radical cystectomy was not associated with LF risk on univariate or multivariate analysis after controlling for risk group. By use of more stringent inclusion criteria, 26 SWOG patients (10%) and 60 patients from the single-institution cohort (14%) were excluded. Analysis of the remaining patients confirmed 3 subgroups with significantly different LF risks with 3-year rates of 7%, 17%, and 36%, respectively (P<.01), nearly identical to the rates without correcting for trial accrual bias. Kaplan-Meier techniques estimated higher subgroup LF rates than competing risk analysis. The subgroup definitions used in the NRG-GU001 adj-RT trial were validated. Conclusions: These sources of bias did not invalidate the LF risk stratification or substantially change the model's LF estimates.

Experimental and numerical study on density stratification erosion phenomena with a vertical buoyant jet in a small vessel

Energy Technology Data Exchange (ETDEWEB)

Abe, Satoshi, E-mail: abe.satoshi@jaea.go.jp; Ishigaki, Masahiro; Sibamoto, Yasuteru; Yonomoto, Taisuke

2016-07-15

Highlights: • This paper shows results of a small scale experiment and CFD analyses on a density stratification erosion with a vertical buoyant jet. • The particle image velocimetry (PIV) and quadrupole mass spectrometer (QMS) with a multiport rotating valve were applied. • Two typical well-used RANS models were applied. • The simulated stratification erosion was in agreement with the experimental result, which suggested that the turbulence mixing occurred only in the jet impinging region. - Abstract: The Japan Atomic Energy Agency (JAEA) has started the ROSA-SA project to investigate thermal hydraulic phenomena in a reactor containment vessel during a severe accident. The hydrogen distribution in the vessel is one of significant safety issues in discussing a potential of hydrogen combustion in the containment. Density stratification and its break-up are important phenomena affecting the hydrogen distribution. This paper focuses on a density stratification erosion and break-up mechanism with a vertical buoyant jet promoting the turbulent helium transport. Small scale experiment and computational fluid dynamics (CFD) analyses were carried out for investigating this phenomena. In the experiment, a rectangular vessel made with acrylic plates with a width of 1.5 m, a length of 1.5 m and a height of 1.8 m was used for visualizing flow field with particle image velocimetry (PIV) system. The quadrupole mass spectrometer (QMS) system with a multiport rotating valve was applied for measuring gaseous concentration at 20 elevation points. In CFD analysis with OpenFOAM, two typical well-used turbulence models were used: low-Reynolds number type k–ε model and SST k–ω model, with a turbulence model modification to consider the buoyant effect in the stratification. As a result, the stratification erosion in the CFD analyses with the modified turbulence model agreed well with the experimental data, indicating importance of the turbulence damping by the buoyant effect.

Experimental and numerical study on density stratification erosion phenomena with a vertical buoyant jet in a small vessel

International Nuclear Information System (INIS)

Abe, Satoshi; Ishigaki, Masahiro; Sibamoto, Yasuteru; Yonomoto, Taisuke

2016-01-01

Highlights: • This paper shows results of a small scale experiment and CFD analyses on a density stratification erosion with a vertical buoyant jet. • The particle image velocimetry (PIV) and quadrupole mass spectrometer (QMS) with a multiport rotating valve were applied. • Two typical well-used RANS models were applied. • The simulated stratification erosion was in agreement with the experimental result, which suggested that the turbulence mixing occurred only in the jet impinging region. - Abstract: The Japan Atomic Energy Agency (JAEA) has started the ROSA-SA project to investigate thermal hydraulic phenomena in a reactor containment vessel during a severe accident. The hydrogen distribution in the vessel is one of significant safety issues in discussing a potential of hydrogen combustion in the containment. Density stratification and its break-up are important phenomena affecting the hydrogen distribution. This paper focuses on a density stratification erosion and break-up mechanism with a vertical buoyant jet promoting the turbulent helium transport. Small scale experiment and computational fluid dynamics (CFD) analyses were carried out for investigating this phenomena. In the experiment, a rectangular vessel made with acrylic plates with a width of 1.5 m, a length of 1.5 m and a height of 1.8 m was used for visualizing flow field with particle image velocimetry (PIV) system. The quadrupole mass spectrometer (QMS) system with a multiport rotating valve was applied for measuring gaseous concentration at 20 elevation points. In CFD analysis with OpenFOAM, two typical well-used turbulence models were used: low-Reynolds number type k–ε model and SST k–ω model, with a turbulence model modification to consider the buoyant effect in the stratification. As a result, the stratification erosion in the CFD analyses with the modified turbulence model agreed well with the experimental data, indicating importance of the turbulence damping by the buoyant effect.

About technical possibility to use VEERA facility for investigation of coolant stratification phenomenon in horizontal steam generators

International Nuclear Information System (INIS)

Mitioukov, V.; Mitrioukhine, A.; Korteniemi, V.

1997-01-01

The presentation gives a brief insight on possibility of using the VEERA facility in studying the stratification phenomenon. The idea for such experiments is to use the facility upper plenum part to simulate the conditions in upper part of horizontal steam generator hot collector. The upper part of steam generator hot collector is one of the locations where the stratification can take part during natural circulation mode

Stratification of habitats for identifying habitat selection by Merriam's turkeys

Science.gov (United States)

Mark A. Rumble; Stanley H. Anderson

1992-01-01

Habitat selection patterns of Merriam’s Turkeys were compared in hierarchical analyses of three levels of habitat stratification. Habitat descriptions in first-level analyses were based on dominant species of vegetation. Habitat descriptions in second-level analyses were based on dominant species of vegetation and overstory canopy cover. Habitat descriptions in third-...

Consideration of clinicopathologic features improves patient stratification for multimodal treatment of gastric cancer.

Science.gov (United States)

Cho, In; Kwon, In Gyu; Guner, Ali; Son, Taeil; Kim, Hyoung-Il; Kang, Dae Ryong; Noh, Sung Hoon; Lim, Joon Seok; Hyung, Woo Jin

2017-10-03

Preoperative staging of gastric cancer with computed tomography alone exhibits poor diagnostic accuracy, which may lead to improper treatment decisions. We developed novel patient stratification criteria to select appropriate treatments for gastric cancer patients based on preoperative staging and clinicopathologic features. A total of 5352 consecutive patients who underwent gastrectomy for gastric cancer were evaluated. Preoperative stages were determined according to depth of invasion and nodal involvement on computed tomography. Logistic regression analysis was used to identify clinicopathological factors associated with the likelihood of proper patient stratification. The diagnostic accuracies of computed tomography scans for depth of invasion and nodal involvement were 67.1% and 74.1%, respectively. Among clinicopathologic factors, differentiated tumor histology, tumors smaller than 5 cm, and gross appearance of early gastric cancer on endoscopy were shown to be related to a more advanced stage of disease on preoperative computed tomography imaging than actual pathological stage. Additional consideration of undifferentiated histology, tumors larger than 5 cm, and grossly advanced gastric cancer on endoscopy increased the probability of selecting appropriate treatment from 75.5% to 94.4%. The addition of histology, tumor size, and endoscopic findings to preoperative staging improves patient stratification for more appropriate treatment of gastric cancer.

Automated computer-based CT stratification as a predictor of outcome in hypersensitivity pneumonitis

International Nuclear Information System (INIS)

Jacob, Joseph; Mak, S.M.; Mok, W.; Hansell, D.M.; Bartholmai, B.J.; Rajagopalan, S.; Karwoski, R.; Della Casa, G.; Sugino, K.; Walsh, S.L.F.; Wells, A.U.

2017-01-01

Hypersensitivity pneumonitis (HP) has a variable clinical course. Modelling of quantitative CALIPER-derived CT data can identify distinct disease phenotypes. Mortality prediction using CALIPER analysis was compared to the interstitial lung disease gender, age, physiology (ILD-GAP) outcome model. CALIPER CT analysis of parenchymal patterns in 98 consecutive HP patients was compared to visual CT scoring by two radiologists. Functional indices including forced vital capacity (FVC) and diffusion capacity for carbon monoxide (DLco) in univariate and multivariate Cox mortality models. Automated stratification of CALIPER scores was evaluated against outcome models. Univariate predictors of mortality included visual and CALIPER CT fibrotic patterns, and all functional indices. Multivariate analyses identified only two independent predictors of mortality: CALIPER reticular pattern (p = 0.001) and DLco (p < 0.0001). Automated stratification distinguished three distinct HP groups (log-rank test p < 0.0001). Substitution of automated stratified groups for FVC and DLco in the ILD-GAP model demonstrated no loss of model strength (C-Index = 0.73 for both models). Model strength improved when automated stratified groups were combined with the ILD-GAP model (C-Index = 0.77). CALIPER-derived variables are the strongest CT predictors of mortality in HP. Automated CT stratification is equivalent to functional indices in the ILD-GAP model for predicting outcome in HP. (orig.)

Automated computer-based CT stratification as a predictor of outcome in hypersensitivity pneumonitis

Energy Technology Data Exchange (ETDEWEB)

Jacob, Joseph; Mak, S.M.; Mok, W.; Hansell, D.M. [Royal Brompton and Harefield NHS Foundation Trust, Department of Radiology, Royal Brompton Hospital, London (United Kingdom); Bartholmai, B.J. [Mayo Clinic Rochester, Division of Radiology, Rochester, MN (United States); Rajagopalan, S.; Karwoski, R. [Mayo Clinic Rochester, Biomedical Imaging Resource, Rochester, MN (United States); Della Casa, G. [Universita degli Studi di Modena e Reggio Emilia, Modena, Emilia-Romagna (Italy); Sugino, K. [Toho University Omori Medical Centre, Tokyo (Japan); Walsh, S.L.F. [Kings College Hospital, London (United Kingdom); Wells, A.U. [Royal Brompton and Harefield NHS Foundation Trust, Interstitial Lung Disease Unit, Royal Brompton Hospital, London (United Kingdom)

2017-09-15

Hypersensitivity pneumonitis (HP) has a variable clinical course. Modelling of quantitative CALIPER-derived CT data can identify distinct disease phenotypes. Mortality prediction using CALIPER analysis was compared to the interstitial lung disease gender, age, physiology (ILD-GAP) outcome model. CALIPER CT analysis of parenchymal patterns in 98 consecutive HP patients was compared to visual CT scoring by two radiologists. Functional indices including forced vital capacity (FVC) and diffusion capacity for carbon monoxide (DLco) in univariate and multivariate Cox mortality models. Automated stratification of CALIPER scores was evaluated against outcome models. Univariate predictors of mortality included visual and CALIPER CT fibrotic patterns, and all functional indices. Multivariate analyses identified only two independent predictors of mortality: CALIPER reticular pattern (p = 0.001) and DLco (p < 0.0001). Automated stratification distinguished three distinct HP groups (log-rank test p < 0.0001). Substitution of automated stratified groups for FVC and DLco in the ILD-GAP model demonstrated no loss of model strength (C-Index = 0.73 for both models). Model strength improved when automated stratified groups were combined with the ILD-GAP model (C-Index = 0.77). CALIPER-derived variables are the strongest CT predictors of mortality in HP. Automated CT stratification is equivalent to functional indices in the ILD-GAP model for predicting outcome in HP. (orig.)

Short-term versus long-term heart rate variability in ischemic cardiomyopathy risk stratification

Directory of Open Access Journals (Sweden)

Andreas eVoss

2013-12-01

Full Text Available In industrialized countries with aging populations, heart failure affects 0.3%-2% of the general population. The investigation of 24h-ECG recordings revealed the potential of nonlinear indices of heart rate variability (HRV for enhanced risk stratification in patients with ischemic heart failure (IHF. However, long-term analyses are time-consuming, expensive and delay the initial diagnosis. The objective of this study was to investigate whether 30min short-term HRV analysis is sufficient for comparable risk stratification in IHF in comparison to 24h-HRV analysis. From 256 IHF patients (221 at low risk (IHFLR and 35 at high risk (IHFHR a 24h beat-to-beat time series b the first 30min segment c the 30min most stationary day segment and d the 30min most stationary night segment were investigated. We calculated linear (time and frequency domain and nonlinear HRV analysis indices. Optimal parameter sets for risk stratification in IHF were determined for 24 hours and for each 30min segment by applying discriminant analysis on significant clinical and non-clinical indices. Long- and short-term HRV indices from frequency domain and particularly from nonlinear dynamics revealed high univariate significances (p

Microbial diversity and stratification of South Pacific abyssal marine sediments.

Science.gov (United States)

Durbin, Alan M; Teske, Andreas

2011-12-01

Abyssal marine sediments cover a large proportion of the ocean floor, but linkages between their microbial community structure and redox stratification have remained poorly constrained. This study compares the downcore gradients in microbial community composition to porewater oxygen and nitrate concentration profiles in an abyssal marine sediment column in the South Pacific Ocean. Archaeal 16S rRNA clone libraries showed a stratified archaeal community that changed from Marine Group I Archaea in the aerobic and nitrate-reducing upper sediment column towards deeply branching, uncultured crenarchaeotal and euryarchaeotal lineages in nitrate-depleted, anaerobic sediment horizons. Bacterial 16S rRNA clone libraries revealed a similar shift on the phylum and subphylum level within the bacteria, from a complex community of Alpha-, Gamma- and Deltaproteobacteria, Actinobacteria and Gemmatimonadetes in oxic surface sediments towards uncultured Chloroflexi and Planctomycetes in the anaerobic sediment column. The distinct stratification of largely uncultured bacterial and archaeal groups within the oxic and nitrate-reducing marine sediment column provides initial constraints for their microbial habitat preferences. © 2011 Society for Applied Microbiology and Blackwell Publishing Ltd.

NanoString, a novel digital color-coded barcode technology: current and future applications in molecular diagnostics.

Science.gov (United States)

Tsang, Hin-Fung; Xue, Vivian Weiwen; Koh, Su-Pin; Chiu, Ya-Ming; Ng, Lawrence Po-Wah; Wong, Sze-Chuen Cesar

2017-01-01

Formalin-fixed, paraffin-embedded (FFPE) tissue sample is a gold mine of resources for molecular diagnosis and retrospective clinical studies. Although molecular technologies have expanded the range of mutations identified in FFPE samples, the applications of existing technologies are limited by the low nucleic acids yield and poor extraction quality. As a result, the routine clinical applications of molecular diagnosis using FFPE samples has been associated with many practical challenges. NanoString technologies utilize a novel digital color-coded barcode technology based on direct multiplexed measurement of gene expression and offer high levels of precision and sensitivity. Each color-coded barcode is attached to a single target-specific probe corresponding to a single gene which can be individually counted without amplification. Therefore, NanoString is especially useful for measuring gene expression in degraded clinical specimens. Areas covered: This article describes the applications of NanoString technologies in molecular diagnostics and challenges associated with its applications and the future development. Expert commentary: Although NanoString technology is still in the early stages of clinical use, it is expected that NanoString-based cancer expression panels would play more important roles in the future in classifying cancer patients and in predicting the response to therapy for better personal therapeutic care.

Application of Molecular Adsorber Coatings in Chamber A for the James Webb Space Telescope

Science.gov (United States)

Abraham, Nithin S.

2017-01-01

As a coating made of highly porous zeolite materials, the Molecular Adsorber Coating (MAC) was developed to capture outgassed molecular contaminants, such as hydrocarbons and silicones. For spaceflight applications, the adsorptive capabilities of the coating can alleviate on-orbit outgassing concerns on or near sensitive surfaces and instruments within the spacecraft. Similarly, this sprayable paint technology has proven to be significantly beneficial for ground-based space applications, in particular, for vacuum chamber environments. This presentation describes the application of the MAC technology for the James Webb Space Telescope (JWST) at NASA Johnson Space Center (JSC). The coating was used as a mitigation tool to entrap outgassed contaminants, specifically silicone-based diffusion pump oil, from within JSCs cryogenic optical vacuum chamber test facility called Chamber A. This presentation summarizes the background, fabrication, installation, chemical analysis test results, and future plans for the MAC technology, which was effectively used to protect the JWST test equipment from vacuum chamber contamination. As a coating made of highly porous zeolite materials, the Molecular Adsorber Coating (MAC) was developed to capture outgassed molecular contaminants, such as hydrocarbons and silicones. For spaceflight applications, the adsorptive capabilities of the coating can alleviate on-orbit outgassing concerns on or near sensitive surfaces and instruments within the spacecraft. Similarly, this sprayable paint technology has proven to be significantly beneficial for ground-based space applications, in particular, for vacuum chamber environments. This presentation describes the application of the MAC technology for the James Webb Space Telescope (JWST) at NASA Johnson Space Center (JSC). The coating was used as a mitigation tool to entrap outgassed contaminants, specifically silicone-based diffusion pump oil, from within JSCs cryogenic optical vacuum chamber test

Risk stratification of thyroid nodules on ultrasonography with the French TI-RADS: Description and reflections

International Nuclear Information System (INIS)

Russ, Gilles

2016-01-01

The widespread use of ultrasonography places it in a key position for use in the risk stratification of thyroid nodules. The French proposal is a five-tier system, our version of a thyroid imaging reporting and database system (TI-RADS), which includes a standardized vocabulary and report and a quantified risk assessment. It allows the selection of the nodules that should be referred for fine-needle aspiration biopsies. Effort should be directed towards merging the different risk stratification systems utilized around the world and testing this unified system with multi-center studies

Risk stratification of thyroid nodules on ultrasonography with the French TI-RADS: Description and reflections

Energy Technology Data Exchange (ETDEWEB)

Russ, Gilles [Thyroid and Endocrine Tumor Unit, Department of Nuclear Medicine, La Pitie Salpetriere Hospital, Pierre and Marie Curie University, Paris (Korea, Republic of)

2016-01-15

The widespread use of ultrasonography places it in a key position for use in the risk stratification of thyroid nodules. The French proposal is a five-tier system, our version of a thyroid imaging reporting and database system (TI-RADS), which includes a standardized vocabulary and report and a quantified risk assessment. It allows the selection of the nodules that should be referred for fine-needle aspiration biopsies. Effort should be directed towards merging the different risk stratification systems utilized around the world and testing this unified system with multi-center studies.

Effects of cold stratification pretreatment and pH level on ...

African Journals Online (AJOL)

Previous studies emphasise that low germination rate of its seed is primarily due to deep seed dormancy. Therefore, studies was done on C. tchihatcheffii seeds, to investigate the effects of cold stratification for different periods (90, 120 and 150 days) and different pH values (pH 6.5, 7.5 and 8.5) on seed germination.

Numerical investigation of potential stratification caused by a cryogenic helium spill inside a tunnel

Science.gov (United States)

Sinclair, Cameron; Malecha, Ziemowit; Jedrusyna, Artur

2018-04-01

The sudden release of cryogenic fluid into an accelerator tunnel can pose a significant health and safety risk. For this reason, it is important to evaluate the consequences of such a spill. Previous publications concentrated on either Oxygen Deficiency Hazard or the evaluation of mathematical models using experimental data. No studies to date have focussed on the influence of cryogen inlet conditions on flow development. In this paper, the stratification behaviour of low-temperature helium released into an air-filled accelerator tunnel is investigated for varying helium inlet diameters. A numerical model was constructed using the OpenFOAM Toolbox of a generalised 3D geometry, with similar hydraulic characteristics to the CERN and SLAC tunnels. This model has been validated against published experimental and numerical data. A dimensionless parameter, based on Bakke number, was then determined for the onset of stratification, taking into account the helium inlet diameter; a dimensionless parameter for the degree of stratification was also employed. The simulated flow behaviour is described in terms of these dimensionless parameters, as well as the temperature and oxygen concentration at various heights throughout the tunnel.

Fine-scale patterns of population stratification confound rare variant association tests.

Directory of Open Access Journals (Sweden)

Timothy D O'Connor

Full Text Available Advances in next-generation sequencing technology have enabled systematic exploration of the contribution of rare variation to Mendelian and complex diseases. Although it is well known that population stratification can generate spurious associations with common alleles, its impact on rare variant association methods remains poorly understood. Here, we performed exhaustive coalescent simulations with demographic parameters calibrated from exome sequence data to evaluate the performance of nine rare variant association methods in the presence of fine-scale population structure. We find that all methods have an inflated spurious association rate for parameter values that are consistent with levels of differentiation typical of European populations. For example, at a nominal significance level of 5%, some test statistics have a spurious association rate as high as 40%. Finally, we empirically assess the impact of population stratification in a large data set of 4,298 European American exomes. Our results have important implications for the design, analysis, and interpretation of rare variant genome-wide association studies.

About technical possibility to use VEERA facility for investigation of coolant stratification phenomenon in horizontal steam generators

Energy Technology Data Exchange (ETDEWEB)

Mitioukov, V.; Mitrioukhine, A. [St. Petersburg State Technical Univ. (Russian Federation); Korteniemi, V. [Lappeenranta Univ. of Technology (Finland)

1997-12-31

The presentation gives a brief insight on possibility of using the VEERA facility in studying the stratification phenomenon. The idea for such experiments is to use the facility upper plenum part to simulate the conditions in upper part of horizontal steam generator hot collector. The upper part of steam generator hot collector is one of the locations where the stratification can take part during natural circulation mode. 4 refs.

About technical possibility to use VEERA facility for investigation of coolant stratification phenomenon in horizontal steam generators

Energy Technology Data Exchange (ETDEWEB)

Mitioukov, V; Mitrioukhine, A [St. Petersburg State Technical Univ. (Russian Federation); Korteniemi, V [Lappeenranta Univ. of Technology (Finland)

1998-12-31

The presentation gives a brief insight on possibility of using the VEERA facility in studying the stratification phenomenon. The idea for such experiments is to use the facility upper plenum part to simulate the conditions in upper part of horizontal steam generator hot collector. The upper part of steam generator hot collector is one of the locations where the stratification can take part during natural circulation mode. 4 refs.

Molecular beam epitaxy applications to key materials

CERN Document Server

Farrow, Robin F C

1995-01-01

In this volume, the editor and contributors describe the use of molecular beam epitaxy (MBE) for a range of key materials systems that are of interest for both technological and fundamental reasons. Prior books on MBE have provided an introduction to the basic concepts and techniques of MBE and emphasize growth and characterization of GaAs-based structures. The aim in this book is somewhat different; it is to demonstrate the versatility of the technique by showing how it can be utilized to prepare and explore a range of distinct and diverse materials. For each of these materials systems MBE has played a key role both in their development and application to devices.

When biomolecules meet graphene: from molecular level interactions to material design and applications.

Science.gov (United States)

Li, Dapeng; Zhang, Wensi; Yu, Xiaoqing; Wang, Zhenping; Su, Zhiqiang; Wei, Gang

2016-12-01

Graphene-based materials have attracted increasing attention due to their atomically-thick two-dimensional structures, high conductivity, excellent mechanical properties, and large specific surface areas. The combination of biomolecules with graphene-based materials offers a promising method to fabricate novel graphene-biomolecule hybrid nanomaterials with unique functions in biology, medicine, nanotechnology, and materials science. In this review, we focus on a summarization of the recent studies in functionalizing graphene-based materials using different biomolecules, such as DNA, peptides, proteins, enzymes, carbohydrates, and viruses. The different interactions between graphene and biomolecules at the molecular level are demonstrated and discussed in detail. In addition, the potential applications of the created graphene-biomolecule nanohybrids in drug delivery, cancer treatment, tissue engineering, biosensors, bioimaging, energy materials, and other nanotechnological applications are presented. This review will be helpful to know the modification of graphene with biomolecules, understand the interactions between graphene and biomolecules at the molecular level, and design functional graphene-based nanomaterials with unique properties for various applications.

Advection of pollutants by internal solitary waves in oceanic and atmospheric stable stratifications

Directory of Open Access Journals (Sweden)

G. W. Haarlemmer

1998-01-01

Full Text Available When a pollutant is released into the ocean or atmosphere under turbulent conditions, even a steady release is captured by large eddies resulting in localized patches of high concentration of the pollutant. If such a cloud of pollutant subsequently enters a stable stratification-either a pycnocline or thermocline-then internal waves are excited. Since large solitary internal waves have a recirculating core, pollutants may be trapped in the sclitary wave, and advected large distances through the waveguide provided by the stratification. This paper addresses the mechanisms, through computer and physical simulation, by which a localized release of a dense pollutant results in solitary waves that trap the pollutant or disperse the pollutant faster than in the absence of the waves.

Time-dependent stratification in the Gauthami-Godavari Estuary

Digital Repository Service at National Institute of Oceanography (India)

Rao, T.V.N.

. National Academy of Sciences, Washington, D.C. CZITROM, S. P. R. 1986. The effect of river discharge in the re- sidual circulation in the eastern Irish Sea. Continental Shelf Research 6:475–485. DRONKERS,J.AND J. VAN DE KREEKE. 1986. Experimental deter.... Springer- Verlag, New York. SIMPSON, J. H., J. SHARPLES, AND T. P. RIPPETH. 1991. A perspec- tive model of stratification induced by freshwater runoff. Es- tuarine, Coastal and Shelf Science 33:23–35. STOMMEL, H. 1953. Computation of pollution in a...

Fundamental validation of simulation method for thermal stratification in upper plenum of fast reactors. Analysis of sodium experiment

International Nuclear Information System (INIS)

Ohno, Shuji; Ohshima, Hiroyuki; Sugahara, Akihiro; Ohki, Hiroshi

2010-01-01

Three-dimensional thermal-hydraulic analyses have been carried out for a sodium experiment in a relatively simple axis-symmetric geometry using a commercial CFD code in order to validate simulating methods for thermal stratification behavior in an upper plenum of sodium-cooled fast reactor. Detailed comparison between simulated results and experimental measurement has demonstrated that the code reproduced fairly well the fundamental thermal stratification behaviors such as vertical temperature gradient and upward movement of a stratification interface when utilizing high-order discretization scheme and appropriate mesh size. Furthermore, the investigation has clarified the influence of RANS type turbulence models on phenomena predictability; i.e. the standard k-ε model, the RNG k-ε model and the Reynolds Stress Model. (author)

Enhancement of a Turbulence Sub-Model for More Accurate Predictions of Vertical Stratifications in 3D Coastal and Estuarine Modeling

Directory of Open Access Journals (Sweden)

Wenrui Huang

2010-03-01

Full Text Available This paper presents an improvement of the Mellor and Yamada's 2nd order turbulence model in the Princeton Ocean Model (POM for better predictions of vertical stratifications of salinity in estuaries. The model was evaluated in the strongly stratified estuary, Apalachicola River, Florida, USA. The three-dimensional hydrodynamic model was applied to study the stratified flow and salinity intrusion in the estuary in response to tide, wind, and buoyancy forces. Model tests indicate that model predictions over estimate the stratification when using the default turbulent parameters. Analytic studies of density-induced and wind-induced flows indicate that accurate estimation of vertical eddy viscosity plays an important role in describing vertical profiles. Initial model revision experiments show that the traditional approach of modifying empirical constants in the turbulence model leads to numerical instability. In order to improve the performance of the turbulence model while maintaining numerical stability, a stratification factor was introduced to allow adjustment of the vertical turbulent eddy viscosity and diffusivity. Sensitivity studies indicate that the stratification factor, ranging from 1.0 to 1.2, does not cause numerical instability in Apalachicola River. Model simulations show that increasing the turbulent eddy viscosity by a stratification factor of 1.12 results in an optimal agreement between model predictions and observations in the case study presented in this study. Using the proposed stratification factor provides a useful way for coastal modelers to improve the turbulence model performance in predicting vertical turbulent mixing in stratified estuaries and coastal waters.

Update on Molecular Testing for Cytologically Indeterminate Thyroid Nodules.

Science.gov (United States)

Nishino, Michiya; Nikiforova, Marina

2018-04-01

- Approximately 15% to 30% of thyroid nodules that undergo fine-needle aspiration are classified as cytologically indeterminate, presenting management challenges for patients and clinicians alike. During the past several years, several molecular tests have been developed to reduce the diagnostic uncertainty of indeterminate thyroid fine-needle aspirations. - To review the methodology, clinical validation, and recent peer-reviewed literature for 4 molecular tests that are currently marketed for cytologically indeterminate thyroid fine-needle aspiration specimens: Afirma, ThyroSeq, ThyGenX/ThyraMIR, and RosettaGX Reveal. - Peer-reviewed literature retrieved from PubMed search, data provided by company websites and representatives, and authors' personal experiences. - The 4 commercially available molecular tests for thyroid cytology offer unique approaches to improve the risk stratification of thyroid nodules. Familiarity with data from the validation studies as well as the emerging literature about test performance in the postvalidation setting can help users to select and interpret these tests in a clinically meaningful way.

[Comparing the Application of Hema-Obs RSS to 250 Pregnancies from Obstetrics/Hematology Consultation in Centro Hospitalar São João, Portugal with the Application of Galit Sarig RSS to 90 Pregnancies from Rambam Health Care Campus, Israel].

Science.gov (United States)

Salselas, Ana; Pestana, Inês; Bischoff, Francisco; Guimarães, Mariana; Andrade, Joaquim Aguiar

2015-01-01

Pregnant women with thromboembolic diseases, previous thrombotic episodes or thrombophilia family history were supervised in a multidisciplinary Obstetrics/ Hematology consultation in Centro Hospitalar São João EPE, Porto, Portugal. For the evaluation and medication of these women, a risk stratification scale was used. The aim of this study was to validate a Risk Stratification Scale and thromboprophylaxis protocol by means of comparing it with a similar scale, developed and published by Sarig. We have compared: The distribution, by risk groups, obtained through the application of the two scales on pregnant women followed at Centro Hospitalar São João, Porto, Portugal, consultation; the sensibility and specificity for each one of the scales (DeLong scale, applied to Receiver Operating Characteristic) curves; the outcomes in pregnancies followed in Hospital São João, Porto, PortugalResults: According to our Hema-Obs risk stratification scale, 29% were allocated to low-risk, 47% to high-risk and 24% to very-high-risk groups. According to Galit Sarig risk stratification scale, 24% were considered low-risk, 53% moderate, 16% high-risk and 7% as very high-risk group. In our study we observed 9% of spontaneous abortions, in comparison with 18% in the Galit Sarig cohort. From the application of Receiver Operating Characteristic curve to both risk stratification scales, the results of the calculated areas were 58,8% to our Hema-Obs risk stratification scale and 38,7% to Galit Sarig risk stratification scale, with a Delong test significancie of p = 0.0006. We concluded that Hema-Obs risk stratification scale is an effective support for clinical monitoring of therapeutic strategies.

A Hybrid Imperative and Functional Molecular Mechanics Application

Directory of Open Access Journals (Sweden)

Thomas Deboni

1996-01-01

Full Text Available Molecular mechanics applications model the interactions among large ensembles of discrete particles. They are used where probabilistic methods are inadequate, such as drug chemistry. This methodology is difficult to parallelize with good performance, due to its poor locality, uneven partitions, and dynamic behavior. Imperative programs have been written that attempt this on shared and distributed memory machines. Given such a program, the computational kernel can be rewritten in Sisal, a functional programming language, and integrated with the rest of the imperative program under the Sisal Foreign Language Interface. This allows minimal effort and maximal return from parallelization work, and leaves the work appropriate to imperative implementation in its original form. We describe such an effort, focusing on the parts of the application that are appropriate for Sisal implementation, the specifics of mixed-language programming, and the complex performance behavior of the resulting hybrid code.

Characteristic and Preferences of Green Consumer Stratification As Bases to Formulating Marketing Strategies of Ecolabel-Certified Furniture

Directory of Open Access Journals (Sweden)

Ririn Wulandari

2012-06-01

question. The components used were: satisfaction, safety, socialization, and sustainability, as well as government policies which could open markets. The respondents were 408 potential consumers in Jakarta and its surroundings. The method used was purposive and convenience sampling, in which the survey was conducted at exhibitions and showrooms. Ward Method, Stepwise Discriminant Analysis and Biplot Analysis were used to generate consumer stratifications. Before that, reliability tests were conducted using Crombach Alpha method. In addition, data was explored and reduced using Component Principle Analysis. Preference analysis was performed using the method proposed by Thurston Case V. This study results four stratifications of green consumers. There were similarities and differences in preference on each of the stratification of the component of green marketing strategy as well as the marketing strategies of furniture-certified ecolabel for the targeted consumers.

Surrogate Endpoint Evaluation: Principal Stratification Criteria and the Prentice Definition.

Science.gov (United States)

Gilbert, Peter B; Gabriel, Erin E; Huang, Ying; Chan, Ivan S F

2015-09-01

A common problem of interest within a randomized clinical trial is the evaluation of an inexpensive response endpoint as a valid surrogate endpoint for a clinical endpoint, where a chief purpose of a valid surrogate is to provide a way to make correct inferences on clinical treatment effects in future studies without needing to collect the clinical endpoint data. Within the principal stratification framework for addressing this problem based on data from a single randomized clinical efficacy trial, a variety of definitions and criteria for a good surrogate endpoint have been proposed, all based on or closely related to the "principal effects" or "causal effect predictiveness (CEP)" surface. We discuss CEP-based criteria for a useful surrogate endpoint, including (1) the meaning and relative importance of proposed criteria including average causal necessity (ACN), average causal sufficiency (ACS), and large clinical effect modification; (2) the relationship between these criteria and the Prentice definition of a valid surrogate endpoint; and (3) the relationship between these criteria and the consistency criterion (i.e., assurance against the "surrogate paradox"). This includes the result that ACN plus a strong version of ACS generally do not imply the Prentice definition nor the consistency criterion, but they do have these implications in special cases. Moreover, the converse does not hold except in a special case with a binary candidate surrogate. The results highlight that assumptions about the treatment effect on the clinical endpoint before the candidate surrogate is measured are influential for the ability to draw conclusions about the Prentice definition or consistency. In addition, we emphasize that in some scenarios that occur commonly in practice, the principal strata sub-populations for inference are identifiable from the observable data, in which cases the principal stratification framework has relatively high utility for the purpose of effect

Surrogate Endpoint Evaluation: Principal Stratification Criteria and the Prentice Definition

Science.gov (United States)

Gilbert, Peter B.; Gabriel, Erin E.; Huang, Ying; Chan, Ivan S.F.

2015-01-01

A common problem of interest within a randomized clinical trial is the evaluation of an inexpensive response endpoint as a valid surrogate endpoint for a clinical endpoint, where a chief purpose of a valid surrogate is to provide a way to make correct inferences on clinical treatment effects in future studies without needing to collect the clinical endpoint data. Within the principal stratification framework for addressing this problem based on data from a single randomized clinical efficacy trial, a variety of definitions and criteria for a good surrogate endpoint have been proposed, all based on or closely related to the “principal effects” or “causal effect predictiveness (CEP)” surface. We discuss CEP-based criteria for a useful surrogate endpoint, including (1) the meaning and relative importance of proposed criteria including average causal necessity (ACN), average causal sufficiency (ACS), and large clinical effect modification; (2) the relationship between these criteria and the Prentice definition of a valid surrogate endpoint; and (3) the relationship between these criteria and the consistency criterion (i.e., assurance against the “surrogate paradox”). This includes the result that ACN plus a strong version of ACS generally do not imply the Prentice definition nor the consistency criterion, but they do have these implications in special cases. Moreover, the converse does not hold except in a special case with a binary candidate surrogate. The results highlight that assumptions about the treatment effect on the clinical endpoint before the candidate surrogate is measured are influential for the ability to draw conclusions about the Prentice definition or consistency. In addition, we emphasize that in some scenarios that occur commonly in practice, the principal strata sub-populations for inference are identifiable from the observable data, in which cases the principal stratification framework has relatively high utility for the purpose of

Artificial microRNAs and their applications in plant molecular biology

Directory of Open Access Journals (Sweden)

Pérez-Quintero Álvaro Luis

2010-11-01

Full Text Available

How Global Academic Stratification Affects Local Academies: The Inflated Role of Knowledge Reception in the Philosophy Discipline in Modern Japan

Science.gov (United States)

Chew, Matthew M.

2008-01-01

Sociologists of knowledge find that academic stratification is present among individual scholars, genders, networks, fields, and all kinds of scientific organizations, while communications scholars have been studying global cultural asymmetry for a long time. Yet few researchers have explored the global dimension of academic stratification. In…

Current indications for transplantation: stratification of severe heart failure and shared decision-making.

Science.gov (United States)

Vucicevic, Darko; Honoris, Lily; Raia, Federica; Deng, Mario

2018-01-01

Heart failure (HF) is a complex clinical syndrome that results from structural or functional cardiovascular disorders causing a mismatch between demand and supply of oxygenated blood and consecutive failure of the body's organs. For those patients with stage D HF, advanced therapies, such as mechanical circulatory support (MCS) or heart transplantation (HTx), are potentially life-saving options. The role of risk stratification of patients with stage D HF in a value-based healthcare framework is to predict which subset might benefit from advanced HF (AdHF) therapies, to improve outcomes related to the individual patient including mortality, morbidity and patient experience as well as to optimize health care delivery system outcomes such as cost-effectiveness. Risk stratification and subsequent outcome prediction as well as therapeutic recommendation-making need to be based on the comparative survival benefit rationale. A robust model needs to (I) have the power to discriminate (i.e., to correctly risk stratify patients); (II) calibrate (i.e., to show agreement between the predicted and observed risk); (III) to be applicable to the general population; and (IV) provide good external validation. The Seattle Heart Failure Model (SHFM) and the Heart Failure Survival Score (HFSS) are two of the most widely utilized scores. However, outcomes for patients with HF are highly variable which make clinical predictions challenging. Despite our clinical expertise and current prediction tools, the best short- and long-term survival for the individual patient, particularly the sickest patient, is not easy to identify because among the most severely ill, elderly and frail patients, most preoperative prediction tools have the tendency to be imprecise in estimating risk. They should be used as a guide in a clinical encounter grounded in a culture of shared decision-making, with the expert healthcare professional team as consultants and the patient as an empowered decision-maker in a

Proposals for enhanced health risk assessment and stratification in an integrated care scenario

Science.gov (United States)

Dueñas-Espín, Ivan; Vela, Emili; Pauws, Steffen; Bescos, Cristina; Cano, Isaac; Cleries, Montserrat; Contel, Joan Carles; de Manuel Keenoy, Esteban; Garcia-Aymerich, Judith; Gomez-Cabrero, David; Kaye, Rachelle; Lahr, Maarten M H; Lluch-Ariet, Magí; Moharra, Montserrat; Monterde, David; Mora, Joana; Nalin, Marco; Pavlickova, Andrea; Piera, Jordi; Ponce, Sara; Santaeugenia, Sebastià; Schonenberg, Helen; Störk, Stefan; Tegner, Jesper; Velickovski, Filip; Westerteicher, Christoph; Roca, Josep

2016-01-01

Objectives Population-based health risk assessment and stratification are considered highly relevant for large-scale implementation of integrated care by facilitating services design and case identification. The principal objective of the study was to analyse five health-risk assessment strategies and health indicators used in the five regions participating in the Advancing Care Coordination and Telehealth Deployment (ACT) programme (http://www.act-programme.eu). The second purpose was to elaborate on strategies toward enhanced health risk predictive modelling in the clinical scenario. Settings The five ACT regions: Scotland (UK), Basque Country (ES), Catalonia (ES), Lombardy (I) and Groningen (NL). Participants Responsible teams for regional data management in the five ACT regions. Primary and secondary outcome measures We characterised and compared risk assessment strategies among ACT regions by analysing operational health risk predictive modelling tools for population-based stratification, as well as available health indicators at regional level. The analysis of the risk assessment tool deployed in Catalonia in 2015 (GMAs, Adjusted Morbidity Groups) was used as a basis to propose how population-based analytics could contribute to clinical risk prediction. Results There was consensus on the need for a population health approach to generate health risk predictive modelling. However, this strategy was fully in place only in two ACT regions: Basque Country and Catalonia. We found marked differences among regions in health risk predictive modelling tools and health indicators, and identified key factors constraining their comparability. The research proposes means to overcome current limitations and the use of population-based health risk prediction for enhanced clinical risk assessment. Conclusions The results indicate the need for further efforts to improve both comparability and flexibility of current population-based health risk predictive modelling approaches

Numerical investigation of injector geometry effects on fuel stratification in a GCI engine

KAUST Repository

Atef, Nour; Badra, Jihad; Jaasim, Mohammed; Im, Hong G.; Sarathy, Mani

2017-01-01

Injectors play an important role in direct injection (DI) gasoline compression ignition (GCI) engines by affecting the in-cylinder mixture formation and stratification, which in turn impacts combustion and emissions. In this work, the effects of two different injector geometries, a 7-hole solid-cone injector and an outwardly opening hollow-cone injector, on fuel mixture stratification in a GCI engine were investigated by computational simulations. Three fuels with similar autoignition kinetics, but with different physical properties, were studied to isolate the effect of the combustion chemistry on combustion phasing. In addition, start of injection (SOI) sweeps relevant to low-load engine operating conditions were performed. The results show that physical properties of the fuel do not have significant influence when using a hollow-cone injector. Richer mixtures were observed at all the studied SOI (−40 to −14 CAD aTDC) cases, which can be attributed to the nature of the hollow cone spray. At later SOIs (−18 and −14 CAD aTDC), the richer mixtures are accompanied by lower mean in-cylinder temperature due to the charge cooling effect, which surpasses the equivalence ratio effect. The effect of fuel physical properties on combustion phasing was evident in multi-hole injection cases, which can be attributed to the differences in mixture stratification and equivalence ratio distribution at the time of ignition.

Prognostic stratification of acute pulmonary embolism: Focus on clinical aspects, imaging, and biomarkers

Directory of Open Access Journals (Sweden)

Luca Masotti

2009-07-01

Full Text Available Luca Masotti1, Marc Righini2, Nicolas Vuilleumier3, Fabio Antonelli4, Giancarlo Landini5, Roberto Cappelli6, Patrick Ray71Internal Medicine, 4Clinical Chemistry, Cecina Hospital, Cecina, Italy; 2Division of Angiology and Haemostasis, Department of Internal Medicine, Geneva University Hospital, Switzerland; 3Division of Laboratory Medicine, Department of Genetics and Laboratory Medicine, Geneva University Hospitals and University of Geneva, Switzerland; 5Internal Medicine, Santa Maria Nuova Hospital, Florence, Italy; 6Thrombosis Center, University of Siena, Siena, Italy; 7Department of Emergency Medicine, Centre Hospitalo-Universitaire Pitié-Salpêtrière, UPMC Paris 6, Paris, FranceAbstract: Pulmonary embolism (PE represents a common disease in emergency medicine and guidelines for diagnosis and treatment have had wide diffusion. However, PE morbidity and mortality remain high, especially when associated to hemodynamic instability or right ventricular dysfunction. Prognostic stratification to identify high risk patients needing to receive more aggressive pharmacological and closer monitoring is of utmost importance. Modern guidelines for management of acute PE are based on risk stratification using either clinical, radiological, or laboratory findings. This article reviews the modern treatment of acute PE, which is customized upon patient prognosis. Accordingly the current risk stratification tools described in the literature such as clinical scores, echocardiography, helical computer tomography, and biomarkers will be reviewed.Keywords: pulmonary embolism, prognosis, troponin, BNP, NT-proBNP, echocardiography, computer tomography

Numerical investigation of injector geometry effects on fuel stratification in a GCI engine

KAUST Repository

Atef, Nour

2017-11-24

Injectors play an important role in direct injection (DI) gasoline compression ignition (GCI) engines by affecting the in-cylinder mixture formation and stratification, which in turn impacts combustion and emissions. In this work, the effects of two different injector geometries, a 7-hole solid-cone injector and an outwardly opening hollow-cone injector, on fuel mixture stratification in a GCI engine were investigated by computational simulations. Three fuels with similar autoignition kinetics, but with different physical properties, were studied to isolate the effect of the combustion chemistry on combustion phasing. In addition, start of injection (SOI) sweeps relevant to low-load engine operating conditions were performed. The results show that physical properties of the fuel do not have significant influence when using a hollow-cone injector. Richer mixtures were observed at all the studied SOI (−40 to −14 CAD aTDC) cases, which can be attributed to the nature of the hollow cone spray. At later SOIs (−18 and −14 CAD aTDC), the richer mixtures are accompanied by lower mean in-cylinder temperature due to the charge cooling effect, which surpasses the equivalence ratio effect. The effect of fuel physical properties on combustion phasing was evident in multi-hole injection cases, which can be attributed to the differences in mixture stratification and equivalence ratio distribution at the time of ignition.

Risk Stratification and Shared Decision Making for Colorectal Cancer Screening: A Randomized Controlled Trial.

Science.gov (United States)

Schroy, Paul C; Duhovic, Emir; Chen, Clara A; Heeren, Timothy C; Lopez, William; Apodaca, Danielle L; Wong, John B

2016-05-01

Eliciting patient preferences within the context of shared decision making has been advocated for colorectal cancer (CRC) screening, yet providers often fail to comply with patient preferences that differ from their own. To determine whether risk stratification for advanced colorectal neoplasia (ACN) influences provider willingness to comply with patient preferences when selecting a desired CRC screening option. Randomized controlled trial. Asymptomatic, average-risk patients due for CRC screening in an urban safety net health care setting. Patients were randomized 1:1 to a decision aid alone (n= 168) or decision aid plus risk assessment (n= 173) arm between September 2012 and September 2014. The primary outcome was concordance between patient preference and test ordered; secondary outcomes included patient satisfaction with the decision-making process, screening intentions, test completion rates, and provider satisfaction. Although providers perceived risk stratification to be useful in selecting an appropriate screening test for their average-risk patients, no significant differences in concordance were observed between the decision aid alone and decision aid plus risk assessment groups (88.1% v. 85.0%,P= 0.40) or high- and low-risk groups (84.5% v. 87.1%,P= 0.51). Concordance was highest for colonoscopy and relatively low for tests other than colonoscopy, regardless of study arm or risk group. Failure to comply with patient preferences was negatively associated with satisfaction with the decision-making process, screening intentions, and test completion rates. Single-institution setting; lack of provider education about the utility of risk stratification into their decision making. Providers perceived risk stratification to be useful in their decision making but often failed to comply with patient preferences for tests other than colonoscopy, even among those deemed to be at low risk of ACN. © The Author(s) 2016.

Comparing an Unstructured Risk Stratification to Published Guidelines in Acute Coronary Syndromes.

Science.gov (United States)

Beck, Ann-Jean C C; Hagemeijer, Anouk; Tortolani, Bess; Byrd, Bethany A; Parekh, Amisha; Datillo, Paris; Birkhahn, Robert

2015-09-01

Guidelines are designed to encompass the needs of the majority of patients with a particular condition. The American Heart Association (AHA) in conjunction with the American College of Cardiology (ACC) and the American College of Emergency Physicians (ACEP) developed risk stratification guidelines to aid physicians with accurate and efficient diagnosis and management of patients with acute coronary syndrome (ACS). While useful in a primary care setting, in the unique environment of an emergency department (ED), the feasibility of incorporating guidelines into clinical workflow remains in question. We aim to compare emergency physicians' (EP) clinical risk stratification ability to AHA/ACC/ACEP guidelines for ACS, and assessed each for accuracy in predicting ACS. We conducted a prospective observational cohort study in an urban teaching hospital ED. All patients presenting to the ED with chest pain who were evaluated for ACS had two risk stratification scores assigned: one by the treating physician based on clinical evaluation and the other by the AHA/ACC/ACEP guideline aforementioned. The patient's ACS risk stratification classified by the EP was compared to AHA/ACC/ACEP guidelines. Patients were contacted at 30 days following the index ED visit to determine all cause mortality, unscheduled hospital/ED revisits, and objective cardiac testing performed. We enrolled 641 patients presenting for evaluation by 21 different EPs. There was a difference between the physician's clinical assessment used in the ED, and the AHA/ACC/ACEP task force guidelines. EPs were more likely to assess patients as low risk (40%), while AHA/ACC/ACEP guidelines were more likely to classify patients as intermediate (45%) or high (45%) risk. Of the 119 (19%) patients deemed high risk by EP evaluation, 38 (32%) were diagnosed with ACS. AHA/ACC/ACEP guidelines classified only 57 (9%) patients low risk with 56 (98%) of those patients diagnosed with no ACS. In the ED, physicians are more efficient

Probing Disk Stratification by Combining X-ray and Disk Inclination Data for Taurus-Auriga

Science.gov (United States)

Arraki, Kenza S.; Daly, B.; Harding, M.; McCleary, J.; Cox, A. W.; Grady, C. A.; Woodgate, B. E.; Hamaguchi, K.; Wisniewski, J. P.; Brakken-Thal, S.; Hilton, G.; Bonfield, D.; Williger, G. M.

2010-01-01

Photoelectric neutral Hydrogen absorption, N(H), is a probe of the gas and dust column towards the star. Kastner et al. (2005) found a correlation between N(H) and proplyd aspect ratio in the Orion nebula cluster. We extend this study to Taurus-Auriga by combining publicly available N(H) data from the XMM-Newton Extended Survey of the Taurus molecular cloud (XEST), with published disk inclination data obtained from HST coronagraphic imagery and mm interferometry. Additional inclinations were derived from jet proper motion and radial velocity data obtained from archival HST imagery and the Apache Point Observatory 3.5m telescope's Goddard Fabry-Perot and DIS long-slit spectrograph. Both N(H) and extinction have linear relations with system inclination, where the extinction has a smaller slope than the N(H) trend. Correlations with system inclination demonstrate that the bulk of both N(H) and extinction arise in the disk rather than in remnant envelopes, nearby molecular cloud material, or foreground material. The deficit in extinction compared with predictions for ISM-like gas to dust ratios is consistent with grain growth and settling toward the disk midplane and stratification in disks occurring by 2 Myr. However, the disks remain gas-rich, indicating that giant planet formation is still feasible. We gratefully acknowledge the support of the NASA Motivating Undergraduates in Science and Technology (MUST) Project and of NASA's APRA program under WBS#399131.02.06.02.32. A grant of Director's Discretionary Time funded observing time at the Apache Point Observatory.

Bio-specific recognition and applications: from molecular to colloidal scales

International Nuclear Information System (INIS)

Baudry, Jean; Bertrand, Emanuel; Lequeux, Nicolas; Bibette, Jerome

2004-01-01

Biomolecules have the well-known ability to build reversible complexes. Indeed, antigens and antibodies or adhesion molecules are able to recognize one another with a strong affinity and a very high specificity. This paper first reviews the various techniques and related results about binding and unbinding, at the scale of a unique ligand/receptor couple. One important biotechnological application arising from these recognition phenomena concerns immuno-diagnosis, which is essentially based on the formation of these specific complexes. We show how the physics of colloids associated with the growing scientific background concerning molecular recognition helps in rationalizing and inventing new diagnostic strategies. Finally the concept of colloidal self-assembling systems as biosensors is presented as directly impacting the most important questions related to molecular recognition and their biotechnological implications. (topical review)

Molecular epidemiology, and possible real-world applications in breast cancer.

Science.gov (United States)

Ito, Hidemi; Matsuo, Keitaro

2016-01-01

Gene-environment interaction, a key idea in molecular epidemiology, has enabled the development of personalized medicine. This concept includes personalized prevention. While genome-wide association studies have identified a number of genetic susceptibility loci in breast cancer risk, however, the application of this knowledge to practical prevention is still underway. Here, we briefly review the history of molecular epidemiology and its progress in breast cancer epidemiology. We then introduce our experience with the trial combination of GWAS-identified loci and well-established lifestyle and reproductive risk factors in the risk prediction of breast cancer. Finally, we report our exploration of the cumulative risk of breast cancer based on this risk prediction model as a potential tool for individual risk communication, including genetic risk factors and gene-environment interaction with obesity.

Effects of thermal stratification on transient free convective flow of a ...

Indian Academy of Sciences (India)

2016-09-22

Sep 22, 2016 ... as well as average skin friction and the rate of heat transfer of nanofluids are discussed and represented graphically. The results are found to be in good agreement with the existing results in literature. Keywords. Nanofluid; thermal stratification; transient; isothermal vertical plate. PACS Nos 44.20.+b; 47; 44.

Development of a hot water tank simulation program with improved prediction of thermal stratification in the tank

DEFF Research Database (Denmark)

Fan, Jianhua; Furbo, Simon; Yue, Hongqiang

2015-01-01

A simulation program SpiralSol was developed in previous investigations to calculate thermal performance of a solar domestic hot water (SDHW) system with a hot water tank with a built-in heat exchanger spiral [1]. The simulation program is improved in the paper in term of prediction of thermal...... stratification in the tank. The transient fluid flow and heat transfer in the hot water tank during cooling caused by standby heat loss are investigated by validated computational fluid dynamics (CFD) calculations. Detailed CFD investigations are carried out to determine the influence of thickness and material...... property of the tank wall on thermal stratification in the tank. It is elucidated how thermal stratification in the tank is influenced by the natural convection and how the heat loss from the tank sides will be distributed at different levels of the tank at different thermal conditions. The existing...

The relationship between social stratification and all-cause mortality among children in the United States: 1968-1992.

Science.gov (United States)

DiLiberti, J H

2000-01-01

US childhood poverty rates have increased for most of the past 2 decades. Although overall mortality among children has apparently fallen during this interval, these aggregate mortality rates may hide a disproportionate burden imposed on the least advantaged. This study assessed the impact of social stratification on long-term US childhood mortality rates and examined the temporal relationship between mortality attributable to social stratification and childhood poverty rates. Using US childhood mortality data obtained from the Compressed Mortality File (National Center for Health Statistics) and a county-level measure of social stratification (residential telephone availability), I evaluated the impact of social stratification on long-term trends (1968-1992) in age-adjusted mortality and compared the resulting attributable proportions to trends in childhood poverty rates. Between 1968 and 1987 the proportion of US childhood deaths attributable to social stratification decreased from.22 to.17. Subsequently, it increased to.24 in 1992, despite continuous declines in overall childhood mortality rates. These proportions correlated strongly with earlier childhood poverty rates, taking into account an apparent 9-year lag. Among black children comparable trends were not observed, although throughout this time period their mortality rates were far higher than among the rest of the population and declined more slowly. Despite declining childhood mortality rates between 1968 and 1992, children living in the least advantaged counties continued to die at higher rates than those living in the most advantaged counties. This differential worsened considerably after 1987, and by 1992 had a substantive impact on US life expectancy at birth, resulting in perhaps the most significant (in terms of years of life lost) reversal in the health of the US public in the 20th century.

Research Applications of Proteolytic Enzymes in Molecular Biology

Directory of Open Access Journals (Sweden)

József Tőzsér

2013-11-01

Full Text Available Proteolytic enzymes (also termed peptidases, proteases and proteinases are capable of hydrolyzing peptide bonds in proteins. They can be found in all living organisms, from viruses to animals and humans. Proteolytic enzymes have great medical and pharmaceutical importance due to their key role in biological processes and in the life-cycle of many pathogens. Proteases are extensively applied enzymes in several sectors of industry and biotechnology, furthermore, numerous research applications require their use, including production of Klenow fragments, peptide synthesis, digestion of unwanted proteins during nucleic acid purification, cell culturing and tissue dissociation, preparation of recombinant antibody fragments for research, diagnostics and therapy, exploration of the structure-function relationships by structural studies, removal of affinity tags from fusion proteins in recombinant protein techniques, peptide sequencing and proteolytic digestion of proteins in proteomics. The aim of this paper is to review the molecular biological aspects of proteolytic enzymes and summarize their applications in the life sciences.

AB019. Erectile dysfunction: analysis based on age stratification

OpenAIRE

Kai, Zhang

2015-01-01

Objective To establish the profile of erectile dysfunction in different age groups, and analysis the effect of sildenafil based on age stratification. Subjects and Methods From 2007 to 2008, a total of 4,507 men diagnosed with erectile dysfunction (ED) were enrolled from 46 centers in China; 4,039 of these patients were treated with sildenafil and asked to complete the Erectile Function domain of the International Index of Erectile Function, Erection Hardness Score, and Quality of Erection Qu...

High-energy molecular lasers self-controlled volume-discharge lasers and applications

CERN Document Server

Apollonov, V V

2016-01-01

This book displays the physics and design of high-power molecular lasers. The lasers described are self-controlled volume-discharge lasers. The book explains self-sustained discharge lasers, self-initiated discharge lasers and technical approaches to laser design. Important topics discussed are laser efficiency, laser beam quality and electric field homogeneity. The book contains many new innovative applications.

Impact of chromosome alterations, genetic mutations and clonal hematopoiesis of indeterminate potential (CHIP) on the classification and risk stratification of MDS.

Science.gov (United States)

Ganguly, Bani Bandana; Banerjee, Debasis; Agarwal, Mohan B

2018-03-01

The advent of technological development has undoubtedly advanced biological and molecular inputs for better understanding the heterogeneous hematopoietic pre-malignant disorder of the stem cells known as myelodysplastic syndromes (MDS). Chromosomal rearrangements, including del(3q/5q/7q/11q/12p/20q), loss of 5/7/Y, trisomy 8/19, i(17q), etc. frequently detected in MDS with variable frequencies and combinations, are the integral components of the 5-tier risk-stratification and WHO-2016 classification. Observations on mutations in genes involved in RNA-splicing, DNA methylation, chromatin modification, transcription factor, signal transduction/kinases, RAS pathway, cohesin complex, DNA repair and other pathways have given insights in independent effects and biological interaction of co-occurrence on disease-phenotype and treatment outcome. However, recent concepts of clonal hematopoiesis of indeterminate potential (CHIP) and idiopathic cytopenia of undetermined significance (ICUS) have urged a re-definition of mutational events in non-clonal cytopenia and non-MDS healthy elderly but with a higher risk of overt leukemia. Considering gene mutations, chromosomal alterations, CHIP, ICUS and their significance in classification and risk-scoring certainly presents a comprehensive picture of disease-phenotype towards better understanding of MDS-pathogenesis, its evolution to AML and its response to therapeutic agents. The present review summarizes chromosomal and gene mutations, co-existence of mutational complexity, and WHO-2016 classification and risk-stratifications of MDS to facilitate a better understanding of its pathogenesis. Copyright © 2017 Elsevier Inc. All rights reserved.

Dissolved oxygen stratification and response to thermal structure and long-term climate change in a large and deep subtropical reservoir (Lake Qiandaohu, China).

Science.gov (United States)

Zhang, Yunlin; Wu, Zhixu; Liu, Mingliang; He, Jianbo; Shi, Kun; Zhou, Yongqiang; Wang, Mingzhu; Liu, Xiaohan

2015-05-15

From January 2010 to March 2014, detailed depth profiles of water temperature, dissolved oxygen (DO), and chromophoric dissolved organic matter (CDOM) were collected at three sites in Lake Qiandaohu, a large, deep subtropical reservoir in China. Additionally, we assessed the changes in DO stratification over the past 61 years (1953-2013) based on our empirical models and long-term air temperature and transparency data. The DO concentration never fell below 2 mg/L, the critical value for anoxia, and the DO depth profiles were closely linked to the water temperature depth profiles. In the stable stratification period in summer and autumn, the significant increase in CDOM in the metalimnion explained the decrease in DO due to the oxygen consumed by CDOM. Well-developed oxygen stratification was detected at the three sites in spring, summer and autumn and was associated with thermal stratification. Oxycline depth was significantly negatively correlated with daily air temperature and thermocline thickness but significantly positively correlated with thermocline depth during the stratification weakness period (July-February). However, there were no significant correlations among these parameters during the stratification formation period (March-June). The increase of 1.67 °C in yearly average daily air temperature between 1980 and 2013 and the decrease of 0.78 m in Secchi disk depth caused a decrease of 1.65 m and 2.78 m in oxycline depth, respectively, facilitating oxygen stratification and decreasing water quality. Therefore, climate warming has had a substantial effect on water quality through changing the DO regime in Lake Qiandaohu. Copyright © 2015 Elsevier Ltd. All rights reserved.

Concierge or Information Desk: Teaching Social Stratification through the Malling of America.

Science.gov (United States)

Manning, Robert D.; Price, Derek V.; Rich, Henry J.

1997-01-01

Describes an undergraduate sociology project in which students conducted research at working class and upper-middle class shopping malls. The research focused on social stratification and its manifestation in architectural character, spatial relationships, advertising, and consumer behavior. Includes an appendix that reproduces the fieldwork…

Prodromal Parkinsonism and Neurodegenerative Risk Stratification in REM Sleep Behavior Disorder.

Science.gov (United States)

Barber, Thomas R; Lawton, Michael; Rolinski, Michal; Evetts, Samuel; Baig, Fahd; Ruffmann, Claudio; Gornall, Aimie; Klein, Johannes C; Lo, Christine; Dennis, Gary; Bandmann, Oliver; Quinnell, Timothy; Zaiwalla, Zenobia; Ben-Shlomo, Yoav; Hu, Michele T M

2017-08-01

Rapid eye movement (REM) sleep behavior disorder (RBD) is the most specific marker of prodromal alpha-synucleinopathies. We sought to delineate the baseline clinical characteristics of RBD and evaluate risk stratification models. Clinical assessments were performed in 171 RBD, 296 control, and 119 untreated Parkinson's (PD) participants. Putative risk measures were assessed as predictors of prodromal neurodegeneration, and Movement Disorders Society (MDS) criteria for prodromal PD were applied. Participants were screened for common leucine-rich repeat kinase 2 (LRRK2)/glucocerebrosidase gene (GBA) gene mutations. Compared to controls, participants with RBD had higher rates of solvent exposure, head injury, smoking, obesity, and antidepressant use. GBA mutations were more common in RBD, but no LRRK2 mutations were found. RBD participants performed significantly worse than controls on Unified Parkinson's Disease Rating Scale (UPDRS)-III, timed "get-up-and-go", Flamingo test, Sniffin Sticks, and cognitive tests and had worse measures of constipation, quality of life (QOL), and orthostatic hypotension. For all these measures except UPDRS-III, RBD and PD participants were equally impaired. Depression, anxiety, and apathy were worse in RBD compared to PD participants. Stratification of people with RBD according to antidepressant use, obesity, and age altered the odds ratio (OR) of hyposmia compared to controls from 3.4 to 45.5. 74% (95% confidence interval [CI] 66%, 80%) of RBD participants met the MDS criteria for probable prodromal Parkinson's compared to 0.3% (95% CI 0.009%, 2%) of controls. RBD are impaired across a range of clinical measures consistent with prodromal PD and suggestive of a more severe nonmotor subtype. Clinical risk stratification has the potential to select higher risk patients for neuroprotective interventions. © Sleep Research Society 2017. Published by Oxford University Press [on behalf of the Sleep Research Society].

Effect of Insulation Thickness on Thermal Stratification in Hot Water Tanks

Directory of Open Access Journals (Sweden)

Burak KURŞUN

2018-03-01

Full Text Available One of the important factors to be considered in increasing the efficiency of hot water storage tanks used for thermal energy storage is thermal stratification. Reducing the temperature of the water at the base of the tank provides more utilization of the energy of the heat source during the heating of the water and improves the efficiency of the system. In this study, the effect of the insulation thickness on the outer surface of the tank and the ratio of the tank diameter to the height (D/H on the thermal stratification was investigated numerically. Numerical analyzes were carried out for the condition that the insulation thickness was constant and variable in the range of D/H=0,3-1. Water was used as the heat storage fluid and the analysis results were obtained for eight hours cooling period. Numerical results showed that the temperature difference between the bottom and top surfaces of the tank increased between 7-9 ° C for the range of D / H = 0,3-1 with changing the insulation thickness.

One-Dimensional Analysis of Thermal Stratification in AHTR and SFR Coolant Pools

International Nuclear Information System (INIS)

Haihua Zhao; Per F. Peterson

2007-01-01

extended to analyze liquid salt pool systems in the current AHTR design, to provide an example of its application. Similar analysis is possible for liquid-metal cooled reactors. The current AHTR baseline design uses a large buffer salt tank to provide more thermal inertial and safety margin. Reactor vessel, intermediate heat exchangers, pool reactor auxiliary cooling system heat exchangers (PHX), and direct reactor auxiliary cooling system heat exchangers (DHX) are all immerged in the buffer salt pool. These structures provide major driving sources for vertical mixing and thermal stratification. Predication of the temperature distribution within the buffer salt tank directly affects the major safety systems design, such as the PHX and DHX, safety analysis results, and structure thermal stresses analysis. The BMIX++ code is used to predict mixing and thermal stratification in this pool system. This example shows the potential of 1-D analysis methods and BMIX++ to be included in system analysis codes for pool type of Gen-IV reactor systems

STRATIFICATION TECHNIQUE IN MAXILLARY ANTERIOR INCISORS RESTORATION

Directory of Open Access Journals (Sweden)

Janet Kirilova

2014-08-01

Full Text Available Background: Because of their main characteristics: transparency, opalescence and color density, the tooth structures are extremely difficult to restore by means of completely inconspicuous restorations of the natural tooth tissue characteristics. The aim is to show successful aesthetic restoration of III Class dental lesions in upper incisors by means of high quality composites. Materials and method: A female patient visited the clinic being not satisfied with the esthetics of her front teeth. The intraoral examination showed previous restorations and carious lesions in 12, 11, 21, 22. After defining the tooth color a silicone key was made. The treatment was performed under anesthesia, the existing restorations were removed and the carious lesions in teeth 11, 12, 21, 22 were treated with restorations using Vanini edge preparation. The teeth were restored by means of stratification technique. After etching and rinsing, bonding was applied for 20 sec. and then polymerized. After fixing the silicone key enamel shade was applied and then dentine shades UD2, UD3, UD4 of 0.5mm thickness each. The polymerization was done layer by layer. Applied were 10 to 15 layers in total. The composite material was preheated in oven up to 55. Teeth 21 and 22 are restored with Enamel Plus HRi (Micerium. Results and Discussion: Excellent aesthetics is achieved with composite material. They have enamel and dentine shades and allow high quality aesthetics. The polishing is excellent in Enamel Plus HRi (Micerium which is typical for this type of composite. The result of the carious lesion treatment in this patient is real improvement of the dental appearance of her anterior incisors. Conclusion: Materials show excellent aesthetic results due to their characteristics and the stratification technique used.

School choice & social stratification: how intra-district transfers shift the racial/ethnic and economic composition of schools.

Science.gov (United States)

Phillips, Kristie J R; Larsen, Elisabeth S; Hausman, Charles

2015-05-01

The liberation model hypothesizes that school choice liberates students from underperforming schools by giving them the opportunity to seek academically superior schooling options outside of their neighborhoods. Subsequently, school choice is hypothesized to diminish stratification in schools. Data from one urban school district is analyzed to test these hypotheses. We specifically examine which factors influence the propensity for parents to participate in choice, and how school choice changes the racial/ethnic and economic composition of schools. We further examine how school choice influences similar changes within distinct sociogeographic areas within the district. We find that families who are zoned to more racially/ethnically and economically diverse schools in sociogeographically diverse areas are more likely to participate in school choice. We also find that intra-district choice is associated with a slight increase in social stratification throughout the district, with more substantial stratification occurring in the most demographically diverse areas and schools. Copyright © 2014 Elsevier Inc. All rights reserved.

Molecular diagnostics in the management of rhabdomyosarcoma.

Science.gov (United States)

Arnold, Michael A; Barr, Fredric G

2017-02-01

A classification of rhabdomyosarcoma (RMS) with prognostic relevance has primarily relied on clinical features and histologic classification as either embryonal or alveolar RMS. The PAX3-FOXO1 and PAX7-FOXO1 gene fusions occur in 80% of cases with the alveolar subtype and are more predictive of outcome than histologic classification. Identifying additional molecular hallmarks that further subclassify RMS is an active area of research. Areas Covered: The authors review the current state of the PAX3-FOXO1 and PAX7-FOXO1 fusions as prognostic biomarkers. Emerging biomarkers, including mRNA expression profiling, MYOD1 mutations, RAS pathway mutations and gene fusions involving NCOA2 or VGLL2 are also reviewed. Expert commentary: Strategies for modifying RMS risk stratification based on molecular biomarkers are emerging with the potential to transform the clinical management of RMS, ultimately improving patient outcomes by tailoring therapy to predicted patient risk and identifying targets for novel therapies.

Anatomic mapping of molecular subtypes in diffuse glioma.

Science.gov (United States)

Tang, Qisheng; Lian, Yuxi; Yu, Jinhua; Wang, Yuanyuan; Shi, Zhifeng; Chen, Liang

2017-09-15

Tumor location served as an important prognostic factor in glioma patients was considered to postulate molecular features according to cell origin theory. However, anatomic distribution of unique molecular subtypes was not widely investigated. The relationship between molecular phenotype and histological subgroup were also vague based on tumor location. Our group focuses on the study of glioma anatomic location of distinctive molecular subgroups and histology subtypes, and explores the possibility of their consistency based on clinical background. We retrospectively reviewed 143 cases with both molecular information (IDH1/TERT/1p19q) and MRI images diagnosed as cerebral diffuse gliomas. The anatomic distribution was analyzed between distinctive molecular subgroups and its relationship with histological subtypes. The influence of tumor location, molecular stratification and histology diagnosis on survival outcome was investigated as well. Anatomic locations of cerebral diffuse glioma indicate varied clinical outcome. Based on that, it can be stratified into five principal molecular subgroups according to IDH1/TERT/1p19q status. Triple-positive (IDH1 and TERT mutation with 1p19q codeletion) glioma tended to be oligodendroglioma present with much better clinical outcome compared to TERT mutation only group who is glioblastoma inclined (median overall survival 39 months VS 18 months). Five molecular subgroups were demonstrated with distinctive locational distribution. This kind of anatomic feature is consistent with its corresponding histological subtypes. Each molecular subgroup in glioma has unique anatomic location which indicates distinctive clinical outcome. Molecular diagnosis can be served as perfect complementary tool for the precise diagnosis. Integration of histomolecular diagnosis will be much more helpful in routine clinical practice in the future.

Rumen content stratification in the giraffe (Giraffa camelopardalis).

Science.gov (United States)

Sauer, Cathrine; Clauss, Marcus; Bertelsen, Mads F; Weisbjerg, Martin R; Lund, Peter

2017-01-01

Ruminants differ in the degree of rumen content stratification, with 'cattle-types' (i.e., the grazing and intermediate feeding ruminants) having stratified content, whereas 'moose-types' (i.e., the browsing ruminants) have unstratified content. The feeding ecology, as well as the digestive morphophysiology of the giraffe (Giraffa camelopardalis), suggest that it is a 'moose-type' ruminant. Correspondingly, the giraffe should have an unstratified rumen content and an even rumen papillation pattern. Digesta samples were collected from along the digestive tract of 27 wild-caught giraffes kept in bomas for up to 2months, and 10 giraffes kept in zoological gardens throughout their lives. Samples were analysed for concentration of dry matter, fibre fractions, volatile fatty acids and NH 3 , as well as mean particle size and pH. There was no difference between the dorsal and ventral rumen region in any of these parameters, indicating homogenous rumen content in the giraffes. In addition to the digesta samples, samples of dorsal rumen, ventral rumen and atrium ruminis mucosa were collected and the papillary surface enlargement factor was determined, as a proxy for content stratification. The even rumen papillation pattern observed also supported the concept of an unstratified rumen content in giraffes. Zoo giraffes had a slightly more uneven papillation pattern than boma giraffes. This finding could not be matched by differences in physical characteristics of the rumen content, probably due to an influence of fasting time ante mortem on these parameters. Copyright © 2016 Elsevier Inc. All rights reserved.

Thermal Stratification in Small Solar Domestic Storage Tanks caused by Draw-offs

DEFF Research Database (Denmark)

Jordan, Ulrike; Furbo, Simon

2005-01-01

As shown in many research studies in the past, the thermal stratification of the tank caused by draw-offs has a high impact on the performance of a Solar Domestic Hot Water (SDHW) system. Nevertheless, in most tank models for system simulations the influence of the draw-off pattern on the mixing...... behaviour is not taken into account sufficiently. Two typical Danish domestic water storage tanks, each with a volume of about 150 l, were investigated. In both tanks the inlet pipes are placed at the bottom and hot water is drawn from the upper part of tank. Above the inlet pipes, differently shaped plates...... are placed in order to reduce the mixing of the incoming cold water with the warmer storage water. To measure the thermal stratification thermocouples were placed in a vertical glass tube inside the tank. Measurements were carried out with different draw-off volumes, flow rates, and initial temperatures...

Utility of the exercise electrocardiogram testing in sudden cardiac death risk stratification.

Science.gov (United States)

Refaat, Marwan M; Hotait, Mostafa; Tseng, Zian H

2014-07-01

Sudden cardiac death (SCD) remains a major public health problem. Current established criteria identifying those at risk of sudden arrhythmic death, and likely to benefit from implantable cardioverter defibrillators (ICDs), are neither sensitive nor specific. Exercise electrocardiogram (ECG) testing was traditionally used for information concerning patients' symptoms, exercise capacity, cardiovascular function, myocardial ischemia detection, and hemodynamic responses during activity in patients with hypertrophic cardiomyopathy. We conducted a systematic review of MEDLINE on the utility of exercise ECG testing in SCD risk stratification. Exercise testing can unmask suspected primary electrical diseases in certain patients (catecholaminergic polymorphic ventricular tachycardia or concealed long QT syndrome) and can be effectively utilized to risk stratify patients at an increased (such as early repolarization syndrome and Brugada syndrome) or decreased risk of SCD, such as the loss of preexcitation on exercise testing in asymptomatic Wolff-Parkinson-White syndrome. Exercise ECG testing helps in SCD risk stratification in patients with and without arrhythmogenic hereditary syndromes. © 2014 Wiley Periodicals, Inc.

Advantages using inlet stratification devices in solar domestic hot water storage tanks

DEFF Research Database (Denmark)

Dragsted, Janne; Furbo, Simon; Bava, Federico

2017-01-01

performances of two solar domestic hot water systems are presented. One system is a traditional high flow system with a heat exchanger spiral in the tank. The other system is a low flow system with an external heat exchanger and a newly developed inlet stratifier from EyeCular Technologies ApS installed......The thermal performance of a domestic hot water system is strongly affected by whether the storage tank is stratified or not. Thermal stratification can be built up in a solar storage tank if the heated water from the solar collectors enters the tank through an inlet stratifier.Measured thermal...... with the stratification device has a higher thermal performance compared to the system with the heat exchanger spiral inside the tank.The relative performance (defined as the ratio between the net utilized solar energy of the low flow system and the net utilized solar energy of the high flow system), is a function...

The influence of Southern Ocean surface buoyancy forcing on glacial-interglacial changes in the global deep ocean stratification

OpenAIRE

Sun, S; Eisenman, I; Stewart, AL

2016-01-01

©2016. American Geophysical Union. All Rights Reserved. Previous studies have suggested that the global ocean density stratification below ∼3000 m is approximately set by its direct connection to the Southern Ocean surface density, which in turn is constrained by the atmosphere. Here the role of Southern Ocean surface forcing in glacial-interglacial stratification changes is investigated using a comprehensive climate model and an idealized conceptual model. Southern Ocean surface forcing is f...

Short-peptide-based molecular hydrogels: novel gelation strategies and applications for tissue engineering and drug delivery

Science.gov (United States)

Wang, Huaimin; Yang, Zhimou

2012-08-01

Molecular hydrogels hold big potential for tissue engineering and controlled drug delivery. Our lab focuses on short-peptide-based molecular hydrogels formed by biocompatible methods and their applications in tissue engineering (especially, 3D cell culture) and controlled drug delivery. This feature article firstly describes our recent progresses of the development of novel methods to form hydrogels, including the strategy of disulfide bond reduction and assistance with specific protein-peptide interactions. We then introduce the applications of our hydrogels in fields of controlled stem cell differentiation, cell culture, surface modifications of polyester materials by molecular self-assembly, and anti-degradation of recombinant complex proteins. A novel molecular hydrogel system of hydrophobic compounds that are only formed by hydrolysis processes was also included in this article. The hydrogels of hydrophobic compounds, especially those of hydrophobic therapeutic agents, may be developed into a carrier-free delivery system for long term delivery of therapeutic agents. With the efforts in this field, we believe that molecular hydrogels formed by short peptides and hydrophobic therapeutic agents can be practically applied for 3D cell culture and long term drug delivery in near future, respectively.

BWR MARK I pressure suppression pool mixing and stratification analysis using GOTHIC lumped parameter modeling methodology

International Nuclear Information System (INIS)

Ozdemir, Ozkan Emre; George, Thomas L.

2015-01-01

As a part of the GOTHIC (GOTHIC incorporates technology developed for the electric power industry under the sponsorship of EPRI.) Fukushima Technical Evaluation project (EPRI, 2014a, b, 2015), GOTHIC (EPRI, 2014c) has been benchmarked against test data for pool stratification (EPRI, 2014a, b, Ozdemir and George, 2013). These tests confirmed GOTHIC’s ability to simulate pool mixing and stratification under a variety of anticipated suppression pool operating conditions. The multidimensional modeling requires long simulation times for events that may occur over a period of hours or days. For these scenarios a lumped model of the pressure suppression chamber is desirable to maintain reasonable simulation times. However, a lumped model for the pool is not able to predict the effects of pool stratification that can influence the overall containment response. The main objective of this work is on the development of a correlation that can be used to estimate pool mixing and stratification effects in a lumped modeling approach. A simplified lumped GOTHIC model that includes a two zone model for the suppression pool with controlled circulation between the upper and lower zones was constructed. A pump and associated flow connections are included to provide mixing between the upper and lower pool volumes. Using numerically generated data from a multidimensional GOTHIC model for the suppression pool, a correlation was developed for the mixing rate between the upper and lower pool volumes in a two-zone, lumped model. The mixing rate depends on the pool subcooling, the steam injection rate and the injection depth

The Auckland Cataract Study: Assessing Preoperative Risk Stratification Systems for Phacoemulsification Surgery in a Teaching Hospital.

Science.gov (United States)

Kim, Bia Z; Patel, Dipika V; Sherwin, Trevor; McGhee, Charles N J

2016-11-01

To evaluate 2 preoperative risk stratification systems for assessing the risk of complications in phacoemulsification cataract surgery, performed by residents, fellows, and attending physicians in a public teaching hospital. Cohort study. One observer assessed the clinical data of 500 consecutive cases, prior to phacoemulsification cataract surgery performed between April and June 2015 at Greenlane Clinical Centre, Auckland, New Zealand. Preoperatively 2 risk scores were calculated for each case using the Muhtaseb and Buckinghamshire risk stratification systems. Complications, intraoperative and postoperative, and visual outcomes were analyzed in relation to these risk scores. Intraoperative complication rates increased with higher risk scores using the Muhtaseb or Buckinghamshire stratification system (P = .001 and P = .003, respectively, n = 500). The odds ratios for residents and fellows were not significantly different from attending physicians after case-mix adjustment according to risk scores (P > .05). Postoperative complication rates increased with higher Buckinghamshire risk scores but not with Muhtaseb scores (P = .014 and P = .094, respectively, n = 476). Postoperative corrected-distance visual acuity was poorer with higher risk scores (P < .001 for both, n = 476). This study confirms that the risk of intraoperative complications increases with higher preoperative risk scores. Furthermore, higher risk scores correlate with poorer postoperative visual acuity and the Buckinghamshire risk score also correlates with postoperative complications. Therefore, preoperative assessment using such risk stratification systems could assist individual informed consent, preoperative surgical planning, safe allocation of cases to trainees, and more meaningful analyses of outcomes for individual surgeons and institutions. Copyright © 2016 Elsevier Inc. All rights reserved.

Integrating open-source software applications to build molecular dynamics systems.

Science.gov (United States)

Allen, Bruce M; Predecki, Paul K; Kumosa, Maciej

2014-04-05

Three open-source applications, NanoEngineer-1, packmol, and mis2lmp are integrated using an open-source file format to quickly create molecular dynamics (MD) cells for simulation. The three software applications collectively make up the open-source software (OSS) suite known as MD Studio (MDS). The software is validated through software engineering practices and is verified through simulation of the diglycidyl ether of bisphenol-a and isophorone diamine (DGEBA/IPD) system. Multiple simulations are run using the MDS software to create MD cells, and the data generated are used to calculate density, bulk modulus, and glass transition temperature of the DGEBA/IPD system. Simulation results compare well with published experimental and numerical results. The MDS software prototype confirms that OSS applications can be analyzed against real-world research requirements and integrated to create a new capability. Copyright © 2014 Wiley Periodicals, Inc.

Risk stratification of gallbladder polyps (1-2 cm) for surgical intervention with 18F-FDG PET/CT.

Science.gov (United States)

Lee, Jaehoon; Yun, Mijin; Kim, Kyoung-Sik; Lee, Jong-Doo; Kim, Chun K

2012-03-01

We assessed the value of (18)F-FDG uptake in the gallbladder polyp (GP) in risk stratification for surgical intervention and the optimal cutoff level of the parameters derived from GP (18)F-FDG uptake for differentiating malignant from benign etiologies in a select, homogeneous group of patients with 1- to 2-cm GPs. Fifty patients with 1- to 2-cm GPs incidentally found on the CT portion of PET/CT were retrospectively analyzed. All patients had histologic diagnoses. GP (18)F-FDG activity was visually scored positive (≥liver) or negative (L ratio) were also measured. Univariate and multivariate logistic regression analyses were performed to determine the utility of patient and clinical variables--that is, sex, age, gallstone, polyp size, and three (18)F-FDG-related parameters in risk stratification. Twenty GPs were classified as malignant and 30 as benign. Multivariate analyses showed that the age and all parameters (visual criteria, SUVgp, and GP/L) related to (18)F-FDG uptake were significant risk factors, with the GP/L being the most significant. The sex, size of GPs, and presence of concurrent gallstones were found to be insignificant. (18)F-FDG uptake in a GP is a strong risk factor that can be used to determine the necessity of surgical intervention more effectively than other known risk factors. However, all criteria derived from (18)F-FDG uptake presented in this series may be applicable to the assessment of 1- to 2-cm GPs.

Post-stratification based on a choice of a randomization device

Directory of Open Access Journals (Sweden)

Sarjinder Singh

2014-06-01

Full Text Available In this paper, we use the idea of post-stratification based on the respondents’ choice of a particular randomization device in order to estimate the population proportion of a sensitive characteristic. The proposed idea gives full freedom to the respondents and is expected to result in greater cooperation from them as well as to provide some increase in the relative efficiency of the newly proposed estimator.

Proposals for enhanced health risk assessment and stratification in an integrated care scenario

NARCIS (Netherlands)

Duenas-Espin, Ivan; Vela, Emili; Pauws, Steffen; Bescos, Cristina; Cano, Isaac; Cleries, Montserrat; Carles Contel, Joan; de Manuel Keenoy, Esteban; Garcia-Aymerich, Judith; Gomez-Cabrero, David; Kaye, Rachelle; Lahr, Maarten M. H.; Lluch-Ariet, Magi; Moharra, Montserrat; Monterde, David; Mora, Joana; Nalin, Marco; Pavlickova, Andrea; Piera, Jordi; Ponce, Sara; Santaeugenia, Sebastia; Schonenberg, Helen; Stoerk, Stefan; Tegner, Jesper; Velickovski, Filip; Westerteicher, Christoph; Roca, Josep

2016-01-01

Objectives: Population-based health risk assessment and stratification are considered highly relevant for large-scale implementation of integrated care by facilitating services design and case identification. The principal objective of the study was to analyse five health-risk assessment strategies

Proposals for enhanced health risk assessment and stratification in an integrated care scenario

NARCIS (Netherlands)

Dueñas-Espín, Ivan; Vela, Emili; Pauws, Steffen; Bescos, Cristina; Cano, Isaac; Cleries, Montserrat; Contel, Joan Carles; de Manuel Keenoy, Esteban; Garcia-Aymerich, Judith; Gomez-Cabrero, David; Kaye, Rachelle; Lahr, Maarten M H; Lluch-Ariet, Magí; Moharra, Montserrat; Monterde, David; Mora, Joana; Nalin, Marco; Pavlickova, Andrea; Piera, Jordi; Ponce, Sara; Santaeugenia, Sebastià; Schonenberg, Helen; Störk, Stefan; Tegner, Jesper; Velickovski, Filip; Westerteicher, Christoph; Roca, Josep

2016-01-01

OBJECTIVES: Population-based health risk assessment and stratification are considered highly relevant for large-scale implementation of integrated care by facilitating services design and case identification. The principal objective of the study was to analyse five health-risk assessment strategies

Gender and cultural differences in the association between family roles, social stratification, and alcohol use: a European cross-cultural analysis.

Science.gov (United States)

Kuntsche, Sandra; Gmel, Gerhard; Knibbe, Ronald A; Kuendig, Hervé; Bloomfield, Kim; Kramer, Stephanie; Grittner, Ulrike

2006-01-01

First, this paper investigates (i) gender differences in associations of social stratification, family roles, and heavy drinking, and (ii) country differences in these associations. Second, it seeks to explain country differences in the associations of social stratification and family roles with alcohol consumption by societal level variables. Survey data of 25 to 49-years-old from eight European countries were used. Logistic regressions were used to analyse gender differences in the association between family roles (marriage, having children), social stratification (education, employment), and heavy drinking (>20 g/day for women; 30 g/day for men). Gender differences were tested by means of interactions between gender and social stratification/family roles. Structural measures of work desirability, social welfare, and gender equity were used to explain differences in associations across countries. The associations between social stratification, family roles, and heavy drinking varied across gender and countries. A country's social welfare system was associated with heavy drinking only among women. Women in countries with a strong social welfare system, such as Nordic countries, tended to drink more heavily if employed, having lower formal education, and a non-traditional family role. In countries with weak social welfare systems or work desirability, heavy drinking was associated with high education, while effects of family roles and employment were small. It appeared that the social welfare system and gender equity of a country determines to a large extent how education, employment, and family roles are associated with heavy drinking.

Unification of favourable intermediate-, unfavourable intermediate-, and very high-risk stratification criteria for prostate cancer.

Science.gov (United States)

Zumsteg, Zachary S; Zelefsky, Michael J; Woo, Kaitlin M; Spratt, Daniel E; Kollmeier, Marisa A; McBride, Sean; Pei, Xin; Sandler, Howard M; Zhang, Zhigang

2017-11-01

To improve on the existing risk-stratification systems for prostate cancer. This was a retrospective investigation including 2 248 patients undergoing dose-escalated external beam radiotherapy (EBRT) at a single institution. We separated National Comprehensive Cancer Network (NCCN) intermediate-risk prostate cancer into 'favourable' and 'unfavourable' groups based on primary Gleason pattern, percentage of positive biopsy cores (PPBC), and number of NCCN intermediate-risk factors. Similarly, NCCN high-risk prostate cancer was stratified into 'standard' and 'very high-risk' groups based on primary Gleason pattern, PPBC, number of NCCN high-risk factors, and stage T3b-T4 disease. Patients with unfavourable-intermediate-risk (UIR) prostate cancer had significantly inferior prostate-specific antigen relapse-free survival (PSA-RFS, P prostate cancer-specific mortality (PCSM, P prostate cancer. Similarly, patients with very high-risk (VHR) prostate cancer had significantly worse PSA-RFS (P prostate cancer. Moreover, patients with FIR and low-risk prostate cancer had similar outcomes, as did patients with UIR and SHR prostate cancer. Consequently, we propose the following risk-stratification system: Group 1, low risk and FIR; Group 2, UIR and SHR; and Group 3, VHR. These groups have markedly different outcomes, with 8-year distant metastasis rates of 3%, 9%, and 29% (P < 0.001) for Groups 1, 2, and 3, respectively, and 8-year PCSM of 1%, 4%, and 13% (P < 0.001) after EBRT. This modified stratification system was significantly more accurate than the three-tiered NCCN system currently in clinical use for all outcomes. Modifying the NCCN risk-stratification system to group FIR with low-risk patients and UIR with SHR patients, results in modestly improved prediction of outcomes, potentially allowing better personalisation of therapeutic recommendations. © 2017 The Authors BJU International © 2017 BJU International Published by John Wiley & Sons Ltd.

Molecular methods for typing of Helicobacter pylori and their applications

DEFF Research Database (Denmark)

Colding, H; Hartzen, S H; Roshanisefat, H

1999-01-01

.g. the urease genes. Furthermore, reproducibility, discriminatory power, ease of performance and interpretation, cost and toxic procedures of each method are assessed. To date no direct comparison of all the molecular typing methods described has been performed in the same study with the same H. pylori strains....... However, PCR analysis of the urease gene directly on suspensions of H. pylori or gastric biopsy material seems to be useful for routine use and applicable in specific epidemiological situations....

THERMAL STRATIFICATION IN SOLAR DOMESTIC STORAGE TANKS CAUSED BY DRAW-OFFS

DEFF Research Database (Denmark)

Jordan, Ulrike; Furbo, Simon

2003-01-01

As shown in many research studies in the past, the thermal stratification of the tank caused by draw-offs has a high impact on the performance of a Solar Domestic Hot Water (SDHW) system. Nevertheless, in most tank models for system simulations the influence of the draw-off pattern on the mixing...... with a component oriented simulation tool for solar thermal systems....

Stratification requirements for germination of western larch (Larix occidentalis Nutt.) seed.

Science.gov (United States)

Frank C. Sorenson

1990-01-01

A northeast Washington collection of western larch seeds was stratified for 0,10, 20, 40, and 80 days and incubated at 55, 64, and 73 °F. The germination percentage of filled seeds and speed and uniformity of germination were improved by long stratification, particularly at the lowest incubation temperature. Stratified seeds were also nursery sown in early April and...

Evaluation of stratification factors and score-scales in clinical trials of treatment of clinical mastitis in dairy cows.

Science.gov (United States)

Hektoen, L; Ødegaard, S A; Løken, T; Larsen, S

2004-05-01

There is often a need to reduce sample size in clinical trials due to practical limitations and ethical considerations. Better comparability between treatment groups by use of stratification in the design, and use of continuous outcome variables in the evaluation of treatment results, are two methods that can be used in order to achieve this. In this paper the choice of stratification factors in trials of clinical mastitis in dairy cows is investigated, and two score-scales for evaluation of clinical mastitis are introduced. The outcome in 57 dairy cows suffering from clinical mastitis and included in a clinical trial comparing homeopathic treatment, placebo and a standard antibiotic treatment is investigated. The strata of various stratification factors are compared across treatments to determine which other factors influence outcome. The two score scales, measuring acute and chronic mastitis symptoms, respectively, are evaluated on their ability to differentiate between patients classified from clinical criteria as responders or non-responders to treatment. Differences were found between the strata of the factors severity of mastitis, lactation number, previous mastitis this lactation and bacteriological findings. These factors influence outcome of treatment and appear relevant as stratification factors in mastitis trials. Both score scales differentiated between responders and non-responders to treatment and were found useful for evaluation of mastitis and mastitis treatment.

Perception urbaine, distraction et stratification chez Benjamin, Eisenstein et Vertov

OpenAIRE

Rousse, Pascal

2008-01-01

La ville à l’écran est le substrat imaginaire et historique du cinéma. Mais le cinéma, burlesque et soviétique, transforme ce contexte tout en constituant sa mémoire. Walter Benjamin inaugura cette problématique avec la notion de « distraction », liant architecture et cinéma sur le fond du paradigme de la stratification de l’appareil psychique chez Freud.

Application of the Finite Element Method in Atomic and Molecular Physics

Science.gov (United States)

Shertzer, Janine

2007-01-01

The finite element method (FEM) is a numerical algorithm for solving second order differential equations. It has been successfully used to solve many problems in atomic and molecular physics, including bound state and scattering calculations. To illustrate the diversity of the method, we present here details of two applications. First, we calculate the non-adiabatic dipole polarizability of Hi by directly solving the first and second order equations of perturbation theory with FEM. In the second application, we calculate the scattering amplitude for e-H scattering (without partial wave analysis) by reducing the Schrodinger equation to set of integro-differential equations, which are then solved with FEM.

Principal Stratification: A Tool for Understanding Variation in Program Effects across Endogenous Subgroups

Science.gov (United States)

Page, Lindsay C.; Feller, Avi; Grindal, Todd; Miratrix, Luke; Somers, Marie-Andree

2015-01-01

Increasingly, researchers are interested in questions regarding treatment-effect variation across partially or fully latent subgroups defined not by pretreatment characteristics but by postrandomization actions. One promising approach to address such questions is principal stratification. Under this framework, a researcher defines endogenous…

Strongly enhanced colorectal cancer risk stratification by combining family history and genetic risk score

Directory of Open Access Journals (Sweden)

Weigl K

2018-01-01

Full Text Available Korbinian Weigl,1,2 Jenny Chang-Claude,3,4 Phillip Knebel,5 Li Hsu,6 Michael Hoffmeister,1 Hermann Brenner1,2,7 1Division of Clinical Epidemiology and Aging Research, German Cancer Research Center (DKFZ, Heidelberg, 2German Cancer Consortium (DKTK, German Cancer Research Center (DKFZ, Heidelberg, 3Unit of Genetic Epidemiology, German Cancer Research Center (DKFZ, Heidelberg, 4University Cancer Center Hamburg, University Medical Center Hamburg-Eppendorf, Hamburg, 5Department for General, Visceral and Transplantation Surgery, University Heidelberg, Heidelberg, Germany; 6Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA; 7Division of Preventive Oncology, German Cancer Research Center (DKFZ and National Center for Tumor Diseases (NCT, Heidelberg, Germany Background and aim: Family history (FH and genetic risk scores (GRSs are increasingly used for risk stratification for colorectal cancer (CRC screening. However, they were mostly considered alternatively rather than jointly. The aim of this study was to assess the potential of individual and joint risk stratification for CRC by FH and GRS.Patients and methods: A GRS was built based on the number of risk alleles in 53 previously identified single-nucleotide polymorphisms among 2,363 patients with a first diagnosis of CRC and 2,198 controls in DACHS [colorectal cancer: chances for prevention through screening], a population-based case-control study in Germany. Associations between GRS and FH with CRC risk were quantified by multiple logistic regression.Results: A total of 316 cases (13.4% and 214 controls (9.7% had a first-degree relative (FDR with CRC (adjusted odds ratio [aOR] 1.86, 95% CI 1.52–2.29. A GRS in the highest decile was associated with a 3.0-fold increased risk of CRC (aOR 3.00, 95% CI 2.24–4.02 compared with the lowest decile. This association was tentatively more pronounced in older age groups. FH and GRS were essentially unrelated, and their

Molecular engineering of two-photon fluorescent probes for bioimaging applications

Science.gov (United States)

Liu, Hong-Wen; Liu, Yongchao; Wang, Peng; Zhang, Xiao-Bing

2017-03-01

During the past two decades, two-photon microscopy (TPM), which utilizes two near-infrared photons as the excitation source, has emerged as a novel, attractive imaging tool for biological research. Compared with one-photon microscopy, TPM offers several advantages, such as lowering background fluorescence in living cells and tissues, reducing photodamage to biosamples, and a photobleaching phenomenon, offering better 3D spatial localization, and increasing penetration depth. Small-molecule-based two-photon fluorescent probes have been well developed for the detection and imaging of various analytes in biological systems. In this review, we will give a general introduction of molecular engineering of two-photon fluorescent probes based on different fluorescence response mechanisms for bioimaging applications during the past decade. Inspired by the desired advantages of small-molecule two-photon fluorescent probes in biological imaging applications, we expect that more attention will be devoted to the development of new two-photon fluorophores and applications of TPM in areas of bioanalysis and disease diagnosis.

An analysis of system pressure and temperature distribution in self-pressurizer of SMART considering thermal stratification at intermediate cavity

Energy Technology Data Exchange (ETDEWEB)

Kang, Yeon Moon; Lee, Doo Jeong; Yoon, Ju Hyun; Kim, Hwan Yeol [Korea Atomic Energy Research Institute, Taejon (Korea)

1999-03-01

Because the pressurizer is in reactor vessel, the heat transfer from primary water would increase the temperatures of fluids in pressurizer to same temperature of hotleg, if no cooling equipment were supplied. Thus, heat exchanger and thermal insulator are needed to minimize heat transferred from primary water and to remove heat in pressurizer. The temperatures in cavities of pressurizer for normal operation are 70 deg C and 74 deg C for intermediate and end cavity, respectively, which considers the solubility of nitrogen gas in water. Natural convection is the mechanism of heat balance in pressurizer of SMART. In SMART, the heat exchanger in pressurizer is placed in lower part of intermediate cavity, so the heat in upper part of intermediate cavity can't be removed adequately and it can cause thermal stratification. If thermal stratification occurred, it increases heat transfers to nitrogen gas and system pressure increases as the result. Thus, proper evaluation of those effects on system pressure and ways to mitigate thermal stratification should be established. This report estimates the system pressure and temperatures in cavities of pressurizer with considering thermal stratification in intermediate cavity. The system pressure and temperatures for each cavities considered size of wet thermal insulator, temperature of upper plate of reactor vessel, parameters of heat exchanger in intermediate cavity such as flow rate and temperature of cooling water, heat transfer area, effective tube height, and location of cooling tube. In addition to the consideration of thermal stratification thermal mixing of all water in intermediate cavity also considered and compared in this report. (author). 6 refs., 60 figs., 2 tabs.

Impact of redox-stratification on the diversity and distribution of bacterial communities in sandy reef sediments in a microcosm

Institute of Scientific and Technical Information of China (English)

GAO Zheng; WANG Xin; Angelos K. HANNIDES; Francis J. SANSONE; WANG Guangyi

2011-01-01

Relationships between microbial communities and geochemical environments are important in marine microbial ecology and biogeochemistry.Although biogeochemical redox stratification has been well documented in marine sediments,its impact on microbial communities remains largely unknown.In this study,we applied denaturing gradient gel electrophoresis (DGGE) and clone library construction to investigate the diversity and stratification of bacterial communities in redox-stratified sandy reef sediments in a microcosm.A total of 88 Operational Taxonomic Units (OTU) were identified from 16S rRNA clone libraries constructed from sandy reef sediments in a laboratory microcosm.They were members of nine phyla and three candidate divisions,including Proteobacteria (Alpha-,Beta-,Gamma-,Delta-,and Epsilonproteobacteria),Actinobacteria,Acidobacteria,Bacteroidetes,Chloroflexi,Cyanobacteria,Firmicutes,Verrucomicrobia,Spirochaetes,and the candidate divisions WS3,SO31 and AO19.The vast majority of these phylotypes are related to clone sequences from other marine sediments,but OTUs of Epsilonproteobacteria and WS3 are reported for the first time from permeable marine sediments.Several other OTUs are potential new bacterial phylotypes because of their low similarity with reference sequences.Results from the 16S rRNA,gene clone sequence analyses suggested that bacterial communities exhibit clear stratification across large redox gradients in these sediments,with the highest diversity found in the anoxic layer (15-25 mm) and the least diversity in the suboxic layer (3-5 mm).Analysis of the nosZ,and amoA gene libraries also indicated the stratification of denitrifiers and nitrifiers,with their highest diversity being in the anoxic and oxic sediment layers,respectively.These results indicated that redox-stratification can affect the distribution of bacterial communities in sandy reef sediments.

Novel Applications of Metabolomics in Personalized Medicine: A Mini-Review.

Science.gov (United States)

Li, Bingbing; He, Xuyun; Jia, Wei; Li, Houkai

2017-07-13

Interindividual variability in drug responses and disease susceptibility is common in the clinic. Currently, personalized medicine is highly valued, the idea being to prescribe the right medicine to the right patient. Metabolomics has been increasingly applied in evaluating the therapeutic outcomes of clinical drugs by correlating the baseline metabolic profiles of patients with their responses, i.e., pharmacometabonomics, as well as prediction of disease susceptibility among population in advance, i.e., patient stratification. The accelerated advance in metabolomics technology pinpoints the huge potential of its application in personalized medicine. In current review, we discussed the novel applications of metabolomics with typical examples in evaluating drug therapy and patient stratification, and underlined the potential of metabolomics in personalized medicine in the future.

Stratification and the Emergence of the Postsecondary Private Education Sector in Vietnam

Science.gov (United States)

Goyette, Kimberly Ann

2012-01-01

Vietnam has a strong public postsecondary education sector that has only recently begun to experience growth in nonpublic institutions. I investigate how the growth of nonpublic institutions may be related to stratification in Vietnam. I find that these institutions are more likely to serve more advantaged students from South Vietnam. Students pay…

Playing the (Sexual) Field: The Interactional Basis of Systems of Sexual Stratification

Science.gov (United States)

Green, Adam Isaiah

2011-01-01

Recently, scholars have used a Bourdieusian theory of practice to analyze systems of sexual stratification, including an examination of sexual fields and sexual (or erotic) capital. While the broad structural features of the sexual field have been a point of focus in this latter research, a systematic analysis of the interactional processes that…

Using Multiple-hierarchy Stratification and Life Course Approaches to Understand Health Inequalities: The Intersecting Consequences of Race, Gender, SES, and Age.

Science.gov (United States)

Brown, Tyson H; Richardson, Liana J; Hargrove, Taylor W; Thomas, Courtney S

2016-06-01

This study examines how the intersecting consequences of race-ethnicity, gender, socioeconomics status (SES), and age influence health inequality. We draw on multiple-hierarchy stratification and life course perspectives to address two main research questions. First, does racial-ethnic stratification of health vary by gender and/or SES? More specifically, are the joint health consequences of racial-ethnic, gender, and socioeconomic stratification additive or multiplicative? Second, does this combined inequality in health decrease, remain stable, or increase between middle and late life? We use panel data from the Health and Retirement Study (N = 12,976) to investigate between- and within-group differences in in self-rated health among whites, blacks, and Mexican Americans. Findings indicate that the effects of racial-ethnic, gender, and SES stratification are interactive, resulting in the greatest racial-ethnic inequalities in health among women and those with higher levels of SES. Furthermore, racial-ethnic/gender/SES inequalities in health tend to decline with age. These results are broadly consistent with intersectionality and aging-as-leveler hypotheses. © American Sociological Association 2016.

Application of Molecular Modeling to Urokinase Inhibitors Development

Directory of Open Access Journals (Sweden)

V. B. Sulimov

2014-01-01

Full Text Available Urokinase-type plasminogen activator (uPA plays an important role in the regulation of diverse physiologic and pathologic processes. Experimental research has shown that elevated uPA expression is associated with cancer progression, metastasis, and shortened survival in patients, whereas suppression of proteolytic activity of uPA leads to evident decrease of metastasis. Therefore, uPA has been considered as a promising molecular target for development of anticancer drugs. The present study sets out to develop the new selective uPA inhibitors using computer-aided structural based drug design methods. Investigation involves the following stages: computer modeling of the protein active site, development and validation of computer molecular modeling methods: docking (SOL program, postprocessing (DISCORE program, direct generalized docking (FLM program, and the application of the quantum chemical calculations (MOPAC package, search of uPA inhibitors among molecules from databases of ready-made compounds to find new uPA inhibitors, and design of new chemical structures and their optimization and experimental examination. On the basis of known uPA inhibitors and modeling results, 18 new compounds have been designed, calculated using programs mentioned above, synthesized, and tested in vitro. Eight of them display inhibitory activity and two of them display activity about 10 μM.

Computer aided molecular design with combined molecular modeling and group contribution

DEFF Research Database (Denmark)

Harper, Peter Mathias; Gani, Rafiqul; Kolar, Petr

1999-01-01

Computer-aided molecular design (CAMD) provides a means for determining molecules or mixtures of molecules (CAMMD) having a desirable set of physicochemical properties. The application range of CAMD is restricted due to limitations on the complexity of the generated molecular structures and on th......Computer-aided molecular design (CAMD) provides a means for determining molecules or mixtures of molecules (CAMMD) having a desirable set of physicochemical properties. The application range of CAMD is restricted due to limitations on the complexity of the generated molecular structures...

Civic stratification and crime. A comparison of asylum migrants with different legal statuses

NARCIS (Netherlands)

A.S. Leerkes (Arjen); G.B.M. Engbersen (Godfried); E. Snel (Erik); J. de Boom (Jan)

2017-01-01

textabstractContrary to natural born citizens, migrants can have a variety of legal statuses depending on how they are classified by immigration law. Together, such legal or ‘civic’ statuses constitute a system of civic stratification, from high (privileged) to low (restricted). Recent scholarship

Applications of the semiclassical spectral method to nuclear, atomic, molecular, and polymeric dynamics

International Nuclear Information System (INIS)

Koszykowski, M.L.; Pfeffer, G.A.; Noid, D.W.

1987-01-01

Nonlinear dynamics plays a dominant role in a variety of important problems in chemical physics. Examples are unimolecular reactions, infrared multiphoton decomposition of molecules, the pumping process of the gamma ray laser, dissociation of vibrationally excited state-selected van der Waals's complexes, and many other chemical and atomic processes. The present article discusses recent theoretical studies on the quasi-periodic and chaotic dynamic aspects of vibrational-rotational states of atomic, nuclear, and molecular systems using the semiclassical spectral method (SSM). The authors note that the coordinates, momenta, and so on, are found using classical mechanics in the studies included in this review. They outline the semiclassical spectral method and a wide variety of applications. Although this technique was first developed ten years ago, it has proved to be tremendously successful as a tool used in dynamics problems. Applications include problems in nonlinear dynamics, molecular and atomic spectra, surface science, astronomy and stellar dynamics, nuclear physics, and polymer physics

Molecular structure, functionality and applications of oxidized starches: A review.

Science.gov (United States)

Vanier, Nathan Levien; El Halal, Shanise Lisie Mello; Dias, Alvaro Renato Guerra; da Rosa Zavareze, Elessandra

2017-04-15

During oxidation, the hydroxyl groups of starch molecules are first oxidized to carbonyl groups, then to carboxyl groups. The contents of the carbonyl and carboxyl groups in a starch molecule therefore indicate the extent of starch oxidation. The mechanisms of starch oxidation with different oxidizing agents, including sodium hypochlorite, hydrogen peroxide, ozone and sodium periodate, are described in this review. The effects of these oxidizing agents on the molecular, physicochemical, thermal, pasting and morphological properties of starch are described as well. In addition, the main industrial applications of oxidized starches are presented. The present review is important for understanding the effects of oxidation on starch properties, and this information may facilitate the development of novel oxidized starches for both food and non-food applications. Copyright © 2016 Elsevier Ltd. All rights reserved.

Ionic Size Effects: Generalized Boltzmann Distributions, Counterion Stratification, and Modified Debye Length.

Science.gov (United States)

Liu, Bo; Liu, Pei; Xu, Zhenli; Zhou, Shenggao

2013-10-01

Near a charged surface, counterions of different valences and sizes cluster; and their concentration profiles stratify. At a distance from such a surface larger than the Debye length, the electric field is screened by counterions. Recent studies by a variational mean-field approach that includes ionic size effects and by Monte Carlo simulations both suggest that the counterion stratification is determined by the ionic valence-to-volume ratios. Central in the mean-field approach is a free-energy functional of ionic concentrations in which the ionic size effects are included through the entropic effect of solvent molecules. The corresponding equilibrium conditions define the generalized Boltzmann distributions relating the ionic concentrations to the electrostatic potential. This paper presents a detailed analysis and numerical calculations of such a free-energy functional to understand the dependence of the ionic charge density on the electrostatic potential through the generalized Boltzmann distributions, the role of ionic valence-to-volume ratios in the counterion stratification, and the modification of Debye length due to the effect of ionic sizes.

Turbulence and pollutant transport in urban street canyons under stable stratification: a large-eddy simulation

Science.gov (United States)

Li, X.

2014-12-01

Thermal stratification of the atmospheric surface layer has strong impact on the land-atmosphere exchange of turbulent, heat, and pollutant fluxes. Few studies have been carried out for the interaction of the weakly to moderately stable stratified atmosphere and the urban canopy. This study performs a large-eddy simulation of a modeled street canyon within a weakly to moderately stable atmosphere boundary layer. To better resolve the smaller eddy size resulted from the stable stratification, a higher spatial and temporal resolution is used. The detailed flow structure and turbulence inside the street canyon are analyzed. The relationship of pollutant dispersion and Richardson number of the atmosphere is investigated. Differences between these characteristics and those under neutral and unstable atmosphere boundary layer are emphasized.

Application of statistical process control to qualitative molecular diagnostic assays.

Science.gov (United States)

O'Brien, Cathal P; Finn, Stephen P

2014-01-01

Modern pathology laboratories and in particular high throughput laboratories such as clinical chemistry have developed a reliable system for statistical process control (SPC). Such a system is absent from the majority of molecular laboratories and where present is confined to quantitative assays. As the inability to apply SPC to an assay is an obvious disadvantage this study aimed to solve this problem by using a frequency estimate coupled with a confidence interval calculation to detect deviations from an expected mutation frequency. The results of this study demonstrate the strengths and weaknesses of this approach and highlight minimum sample number requirements. Notably, assays with low mutation frequencies and detection of small deviations from an expected value require greater sample numbers to mitigate a protracted time to detection. Modeled laboratory data was also used to highlight how this approach might be applied in a routine molecular laboratory. This article is the first to describe the application of SPC to qualitative laboratory data.

Application of statistical process control to qualitative molecular diagnostic assays.

Directory of Open Access Journals (Sweden)

Cathal P O'brien

2014-11-01

Full Text Available Modern pathology laboratories and in particular high throughput laboratories such as clinical chemistry have developed a reliable system for statistical process control. Such a system is absent from the majority of molecular laboratories and where present is confined to quantitative assays. As the inability to apply statistical process control to assay is an obvious disadvantage this study aimed to solve this problem by using a frequency estimate coupled with a confidence interval calculation to detect deviations from an expected mutation frequency. The results of this study demonstrate the strengths and weaknesses of this approach and highlight minimum sample number requirements. Notably, assays with low mutation frequencies and detection of small deviations from an expected value require greater samples with a resultant protracted time to detection. Modelled laboratory data was also used to highlight how this approach might be applied in a routine molecular laboratory. This article is the first to describe the application of statistical process control to qualitative laboratory data.

Application of statistical process control to qualitative molecular diagnostic assays

LENUS (Irish Health Repository)

O'Brien, Cathal P.

2014-11-01

Modern pathology laboratories and in particular high throughput laboratories such as clinical chemistry have developed a reliable system for statistical process control (SPC). Such a system is absent from the majority of molecular laboratories and where present is confined to quantitative assays. As the inability to apply SPC to an assay is an obvious disadvantage this study aimed to solve this problem by using a frequency estimate coupled with a confidence interval calculation to detect deviations from an expected mutation frequency. The results of this study demonstrate the strengths and weaknesses of this approach and highlight minimum sample number requirements. Notably, assays with low mutation frequencies and detection of small deviations from an expected value require greater sample numbers to mitigate a protracted time to detection. Modeled laboratory data was also used to highlight how this approach might be applied in a routine molecular laboratory. This article is the first to describe the application of SPC to qualitative laboratory data.

Theoretical comparison of solar water/space-heating combi systems and stratification design options

DEFF Research Database (Denmark)

Andersen, Elsa; Furbo, Simon

2007-01-01

A theoretical analysis of differently designed solar combi systems is performed with weather data from the Danish Design Reference Year (55ºN). Three solar combi system designs found on the market are investigated. The investigation focuses on the influence of stratification on the thermal perfor...

School Choice, Gentrification, and the Variable Significance of Racial Stratification in Urban Neighborhoods

Science.gov (United States)

Pearman, Francis A., III; Swain, Walker A.

2017-01-01

Racial and socioeconomic stratification have long governed patterns of residential sorting in the American metropolis. However, recent expansions of school choice policies that allow parents to select schools outside their neighborhood raise questions as to whether this weakening of the neighborhood-school connection might influence the…

A novel dual-marker expression panel for easy and accurate risk stratification of patients with gastric cancer.

Science.gov (United States)

Kanda, Mitsuro; Murotani, Kenta; Tanaka, Haruyoshi; Miwa, Takashi; Umeda, Shinichi; Tanaka, Chie; Kobayashi, Daisuke; Hayashi, Masamichi; Hattori, Norifumi; Suenaga, Masaya; Yamada, Suguru; Nakayama, Goro; Fujiwara, Michitaka; Kodera, Yasuhiro

2018-05-07

Development of specific biomarkers is necessary for individualized management of patients with gastric cancer. The aim of this study was to design a simple expression panel comprising novel molecular markers for precise risk stratification. Patients (n = 200) who underwent gastrectomy for gastric cancer were randomly assigned into learning and validation sets. Tissue mRNA expression levels of 15 candidate molecular markers were determined using quantitative PCR analysis. A dual-marker expression panel was created according to concordance index (C-index) values of overall survival for all 105 combinations of two markers in the learning set. The reproducibility and clinical significance of the dual-marker expression panel were evaluated in the validation set. The patient characteristics of the learning and validation sets were well balanced. The C-index values of combinations were significantly higher compared with those of single markers. The panel with the highest C-index (0.718) of the learning set comprised SYT8 and MAGED2, which clearly stratified patients into low-, intermediate-, and high-risk groups. The reproducibility of the panel was demonstrated in the validation set. High expression scores were significantly associated with larger tumor size, vascular invasion, lymph node metastasis, peritoneal metastasis, and advanced disease. The dual-marker expression panel provides a simple tool that clearly stratifies patients with gastric cancer into low-, intermediate-, and high risk after gastrectomy. © 2018 The Authors. Cancer Medicine published by John Wiley & Sons Ltd.

Proposals for enhanced health risk assessment and stratification in an integrated care scenario.

Science.gov (United States)

Dueñas-Espín, Ivan; Vela, Emili; Pauws, Steffen; Bescos, Cristina; Cano, Isaac; Cleries, Montserrat; Contel, Joan Carles; de Manuel Keenoy, Esteban; Garcia-Aymerich, Judith; Gomez-Cabrero, David; Kaye, Rachelle; Lahr, Maarten M H; Lluch-Ariet, Magí; Moharra, Montserrat; Monterde, David; Mora, Joana; Nalin, Marco; Pavlickova, Andrea; Piera, Jordi; Ponce, Sara; Santaeugenia, Sebastià; Schonenberg, Helen; Störk, Stefan; Tegner, Jesper; Velickovski, Filip; Westerteicher, Christoph; Roca, Josep

2016-04-15

Population-based health risk assessment and stratification are considered highly relevant for large-scale implementation of integrated care by facilitating services design and case identification. The principal objective of the study was to analyse five health-risk assessment strategies and health indicators used in the five regions participating in the Advancing Care Coordination and Telehealth Deployment (ACT) programme (http://www.act-programme.eu). The second purpose was to elaborate on strategies toward enhanced health risk predictive modelling in the clinical scenario. The five ACT regions: Scotland (UK), Basque Country (ES), Catalonia (ES), Lombardy (I) and Groningen (NL). Responsible teams for regional data management in the five ACT regions. We characterised and compared risk assessment strategies among ACT regions by analysing operational health risk predictive modelling tools for population-based stratification, as well as available health indicators at regional level. The analysis of the risk assessment tool deployed in Catalonia in 2015 (GMAs, Adjusted Morbidity Groups) was used as a basis to propose how population-based analytics could contribute to clinical risk prediction. There was consensus on the need for a population health approach to generate health risk predictive modelling. However, this strategy was fully in place only in two ACT regions: Basque Country and Catalonia. We found marked differences among regions in health risk predictive modelling tools and health indicators, and identified key factors constraining their comparability. The research proposes means to overcome current limitations and the use of population-based health risk prediction for enhanced clinical risk assessment. The results indicate the need for further efforts to improve both comparability and flexibility of current population-based health risk predictive modelling approaches. Applicability and impact of the proposals for enhanced clinical risk assessment require

[Sports medical aspects in cardiac risk stratification--heart rate variability and exercise capacity].

Science.gov (United States)

Banzer, W; Lucki, K; Bürklein, M; Rosenhagen, A; Vogt, L

2006-12-01

The present study investigates the association of the predicted CHD-risk (PROCAM) with the individual endurance capacity and heart rate variability (HRV) in a population-based sample of sedentary elderly. After stratification, in 57 men (48.1+/-9.5 yrs.) with an overall PROCAM-risk or =10% (50.8+/-5.6 points) cycle ergometries and short-term HRV analysis of time (RRMEAN, SDNN, RMSSD) and frequency domain parameters (LF, HF, TP, LF/HF) were conducted. Additionally the autonomic stress index (SI) was calculated. Nonparametric tests were used for statistical correlation analysis (Spearman rho) and group comparisons (Mann-Whitney). For endurance capacity [W/kg] (r=-0.469, pHRV analysis in risk stratification and outline the interrelation of a decreased exercise capacity and autonomic function with a raised individual 10-year cardiac risk. As an independent parameter of the vegetative regulatory state the stress index may contribute to an increased practical relevance of short-time HRV analysis.

[Comparison of the present and previously used protocol of risk stratification in children with acute lymphoblastic leukemia].

Science.gov (United States)

Glodkowska, Eliza; Bialas, Agnieszka; Jackowska, Teresa

2007-01-01

Acute lymphoblastic leukaemia (ALL) is one of the most common cancers in children. In Poland, since November 2002 a new protocol of risk stratification has been recommended for assessment of risk factors and for choosing therapy regimens. assessment of accuracy of protocol ALL-IC 2002 in comparison to previously used risk stratification protocols. ALL was diagnosed in 100 children (44 girls, 56 boys; 1-18 years of age) in the Department of Pediatric Hematology and Oncology, Warsaw Medical University, over the period from November 2002 to November 2006. According to the ALL-IC 2002 protocol the patients were divided into three risk groups: SR-standard, IR-intermediate and HR-high. The stratification was by age, leukocyte count, cytogenetic changes, early response to prednisone therapy and bone marrow remission. In the previously used risk stratification protocols-BFM-90, only hepatosplenomegaly and the number of blasts in peripheral blood (PB) were considered, and the patients were divided into three risk groups: low (LRG1.2). out of the 100 patients qualified for treatment regimens according to the ALL-IC 2002 protocol, 97 entered remission, 11 died and 3 had a relapse. Under the ALL-IC 2002 protocol these children were stratified into the following groups: SR-31%, IR-44% and HR-25%. In the previously used stratification, there would be 26% children in low, 46% in the medium and 28% in the high risk group. According to the BFM-90 protocol 18/31 (58%) and 16/44 (36%) patients from the SR and IR groups respectively would be given more intensive treatment. On the other hand 11/44 (25%) and 14/25 (56%) patients from the IR and HR groups respectively would be given less intensive treatment. 1. ALL-IC 2002 protocol in comparison with the previously used protocol BFM-90, changes the qualification of children with ALL for the SR, IR and HR risk groups. This is linked to basic change of treatment protocol, adequate to severity of disease. 2. Children with ALL qualified

Effective Momentum and heat flux models for simulation of stratification and mixing in a large pool of water

Energy Technology Data Exchange (ETDEWEB)

Hua Li; Villanueva, W.; Kudinov, P. [Royal Institute of Technology (KTH). Div. of Nuclear Power Safety, Stockholm (Sweden)

2012-06-15

Performance of a boiling water reactor (BWR) containment is mostly determined by reliable operation of pressure suppression pool which serves as a heat sink to cool and condense steam released from the core vessel. Thermal stratification in the pool can significantly impede the pool's pressure suppression capacity. A source of momentum is required in order to break stratification and mix the pool. It is important to have reliable prediction of transient development of stratification and mixing in the pool in different regimes of steam injection. Previously, we have proposed to model the effect of steam injection on the mixing and stratification with the Effective Heat Source (EHS) and the Effective Momentum Source (EMS) models. The EHS model is used to provide thermal effect of steam injection on the pool, preserving heat and mass balance. The EMS model is used to simulate momentum induced by steam injection in different flow regimes. The EMS model is based on the combination of (1) synthetic jet theory, which predicts effective momentum if amplitude and frequency of flow oscillations in the pipe are given, and (2) model proposed by Aya and Nariai for prediction of the amplitude and frequency of oscillations at a given pool temperature and steam mass flux. The complete EHS/EMS models only require the steam mass flux, initial pool bulk temperature, and design-specific parameters, to predict thermal stratification and mixing in a pressure suppression pool. In this work we use EHS/EMS models implemented in containment thermal hydraulic code GOTHIC. The POOLEX/PPOOLEX experiments (Lappeenranta University of Technology, Finland) are utilized, to (a) quantify errors due to GOTHIC's physical models and numerical schemes, (b) propose necessary improvements in GOTHIC sub-grid scale modeling, and (c) validate our proposed models. Specifically the data from POOLEX STB-21 and PPOOLEX STR-03 and STR-04 tests are used for validation of the EHS and EMS models in this

Effective Momentum and heat flux models for simulation of stratification and mixing in a large pool of water

International Nuclear Information System (INIS)

Hua Li; Villanueva, W.; Kudinov, P.

2012-06-01

Performance of a boiling water reactor (BWR) containment is mostly determined by reliable operation of pressure suppression pool which serves as a heat sink to cool and condense steam released from the core vessel. Thermal stratification in the pool can significantly impede the pool's pressure suppression capacity. A source of momentum is required in order to break stratification and mix the pool. It is important to have reliable prediction of transient development of stratification and mixing in the pool in different regimes of steam injection. Previously, we have proposed to model the effect of steam injection on the mixing and stratification with the Effective Heat Source (EHS) and the Effective Momentum Source (EMS) models. The EHS model is used to provide thermal effect of steam injection on the pool, preserving heat and mass balance. The EMS model is used to simulate momentum induced by steam injection in different flow regimes. The EMS model is based on the combination of (1) synthetic jet theory, which predicts effective momentum if amplitude and frequency of flow oscillations in the pipe are given, and (2) model proposed by Aya and Nariai for prediction of the amplitude and frequency of oscillations at a given pool temperature and steam mass flux. The complete EHS/EMS models only require the steam mass flux, initial pool bulk temperature, and design-specific parameters, to predict thermal stratification and mixing in a pressure suppression pool. In this work we use EHS/EMS models implemented in containment thermal hydraulic code GOTHIC. The POOLEX/PPOOLEX experiments (Lappeenranta University of Technology, Finland) are utilized, to (a) quantify errors due to GOTHIC's physical models and numerical schemes, (b) propose necessary improvements in GOTHIC sub-grid scale modeling, and (c) validate our proposed models. Specifically the data from POOLEX STB-21 and PPOOLEX STR-03 and STR-04 tests are used for validation of the EHS and EMS models in this work. We

The Auckland Cataract Study II: Reducing Complications by Preoperative Risk Stratification and Case Allocation in a Teaching Hospital.

Science.gov (United States)

Kim, Bia Z; Patel, Dipika V; McKelvie, James; Sherwin, Trevor; McGhee, Charles N J

2017-09-01

To assess the effect of preoperative risk stratification for phacoemulsification surgery on intraoperative complications in a teaching hospital. Prospective cohort study. Prospective assessment of consecutive phacoemulsification cases (N = 500) enabled calculation of a risk score (M-score of 0-8) using a risk stratification system. M-scores of >3 were allocated to senior surgeons. All surgeries were performed in a public teaching hospital setting, Auckland, New Zealand, in early 2016. Postoperatively, data were reviewed for complications and corrected distance visual acuity (CDVA). Results were compared to a prospective study (N = 500, phase 1) performed prior to formal introduction of risk stratification. Intraoperative complications increased with increasing M-scores (P = .044). Median M-score for complicated cases was higher (P = .022). Odds ratio (OR) for a complication increased 1.269 per unit increase in M-score (95% confidence interval [CI] 1.007-1.599, P = .043). Overall rate of any intraoperative complication was 5.0%. Intraoperative complication rates decreased from 8.4% to 5.0% (OR = 0.576, P = .043) comparing phase 1 and phase 2 (formal introduction of risk stratification). The severity of complications also reduced. A significant decrease in complications for M = 0 (ie, minimal risk cases) was also identified comparing the current study (3.1%) to phase 1 (7.2%), P = .034. There was no change in postoperative complication risks (OR 0.812, P = .434) or in mean postoperative CDVA (20/30, P = .484) comparing current with phase 1 outcomes. A simple preoperative risk stratification system, based on standard patient information gathered at preoperative consultation, appears to reduce intraoperative complications and support safer surgical training by appropriate allocation of higher-risk cases. Copyright © 2017 Elsevier Inc. All rights reserved.

Fungal peroxidases : molecular aspects and applications

NARCIS (Netherlands)

Conesa, A.; Punt, P.J.; Hondel, C.A.M.J.J.

2002-01-01

Peroxidases are oxidoreductases that utilize hydrogen peroxide to catalyze oxidative reactions. A large number of peroxidases have been identified in fungal species and are being characterized at the molecular level. In this manuscript we review the current knowledge on the molecular aspects of this

Challenging the Cancer Molecular Stratification Dogma: Intratumoral Heterogeneity Undermines Consensus Molecular Subtypes and Potential Diagnostic Value in Colorectal Cancer.

Science.gov (United States)

Dunne, Philip D; McArt, Darragh G; Bradley, Conor A; O'Reilly, Paul G; Barrett, Helen L; Cummins, Robert; O'Grady, Tony; Arthur, Ken; Loughrey, Maurice B; Allen, Wendy L; McDade, Simon S; Waugh, David J; Hamilton, Peter W; Longley, Daniel B; Kay, Elaine W; Johnston, Patrick G; Lawler, Mark; Salto-Tellez, Manuel; Van Schaeybroeck, Sandra

2016-08-15

A number of independent gene expression profiling studies have identified transcriptional subtypes in colorectal cancer with potential diagnostic utility, culminating in publication of a colorectal cancer Consensus Molecular Subtype classification. The worst prognostic subtype has been defined by genes associated with stem-like biology. Recently, it has been shown that the majority of genes associated with this poor prognostic group are stromal derived. We investigated the potential for tumor misclassification into multiple diagnostic subgroups based on tumoral region sampled. We performed multiregion tissue RNA extraction/transcriptomic analysis using colorectal-specific arrays on invasive front, central tumor, and lymph node regions selected from tissue samples from 25 colorectal cancer patients. We identified a consensus 30-gene list, which represents the intratumoral heterogeneity within a cohort of primary colorectal cancer tumors. Using a series of online datasets, we showed that this gene list displays prognostic potential HR = 2.914 (confidence interval 0.9286-9.162) in stage II/III colorectal cancer patients, but in addition, we demonstrated that these genes are stromal derived, challenging the assumption that poor prognosis tumors with stem-like biology have undergone a widespread epithelial-mesenchymal transition. Most importantly, we showed that patients can be simultaneously classified into multiple diagnostically relevant subgroups based purely on the tumoral region analyzed. Gene expression profiles derived from the nonmalignant stromal region can influence assignment of colorectal cancer transcriptional subtypes, questioning the current molecular classification dogma and highlighting the need to consider pathology sampling region and degree of stromal infiltration when employing transcription-based classifiers to underpin clinical decision making in colorectal cancer. Clin Cancer Res; 22(16); 4095-104. ©2016 AACRSee related commentary by Morris and

Conception and synthesis of new molecular cages for xenon MRI applications

International Nuclear Information System (INIS)

Delacour, L.

2011-01-01

Non-invasive proton magnetic resonance imaging ( 1 H MRI) is a powerful clinical tool for the detection of numerous diseases. Although MRI contrast agents are often used to improve diagnostic specificity, this technique has limited applications in molecular imaging because of its inherently low sensitivity when compared to nuclear medicine or fluorescence imaging. Laser-polarized 129 Xe NMR spectroscopy is a promising tool to circumvent sensitivity limitations. Indeed, optical pumping increases the nuclear spin polarization of xenon by several orders of magnitude (10 4 to 10 5 ), thus small amounts of gas dissolved in biological tissues (blood, lungs...) can be rapidly detected with an excellent signal-to-noise ratio. In addition, the high polarizability of the xenon electron cloud, which induces a very high sensitivity to its environment, makes this nucleus very attractive for molecular imaging. Detection of biomolecules can be achieved by biosensors, which encapsulate xenon atoms in molecular cages that have been functionalized to bind the desired biological target. Cage molecules such as cryptophanes have high affinity for xenon and thus appear as ideal candidates for its encapsulation. During this PhD thesis we worked on the synthesis and the functionalization of new cryptophanes. (author) [fr

Risk stratification by endocrinologists of patients with type 2 diabetes in a Danish specialised outpatient clinic

DEFF Research Database (Denmark)

Munch, Lene; Arreskov, Anne B; Sperling, Michael

2016-01-01

BACKGROUND: To target optimised medical care the Danish guidelines for diabetes recommend stratification of patients with type 2 diabetes (T2D) into three levels according to risk and complexity of treatment. The aim was to describe the T2D population in an outpatient clinic, measure the compliance......, the endocrinologists stratified less patients at level 3 compared to objective assessments (p Type 2 diabetes patients, newly referred to or allocated for long-term follow-up in the out...... contained the following criteria: HbA1c, blood pressure, metabolic complications, microvascular and macrovascular complications. Stratification levels encompassed: level 1 (uncomplicated), level 2 (intermediate risk) and level 3 (high risk). Objective assessments were conducted independently by two health...

Study on in-vessel thermohydraulics phenomena of sodium-cooled fast reactors. 3. Numerical investigation for thermal stratification phenomena in the upper plenum

International Nuclear Information System (INIS)

Muramatsu, Toshiharu; Yamaguchi, Akira

2002-06-01

A large-scale sodium-cooled fast breeder reactor in the feasibility studies on commercialized fast reactors has a feature of consideration of thorough simplified and compacted systems and components design to realize drastic economical improvements. Therefore, special attentions should be paid to thermohydraulic designs for gas entrainment behavior from free surface, flow-induced vibration of in-vessel components, thermal stratification in the plenum, thermal shock for various structures due to high-speed coolant flows, nonsymmetrical coolant flows, etc. in the reactor vessel. In-vessel thermohydraulic analyses were carried out using a multi-dimensional code AQUA to understand the thermal stratification characteristics in the upper plenum, and to investigate trade-off relations between gas entrainment and thermal stratification phenomena on in-vessel structures for the elimination of gas entrainment possibility. From the analysis, the following results were obtained. (1) Dummy plug insertion to a slit of the upper core structure is one of the effective measures to stabilize the in-vessel flow patterns and to mitigate in-vessel thermal shocks. (2) Though flow guide device such as a baffle ring attached to reactor vessel wall is an effective measure to eliminate impinging jet to dipped plate, rising characteristics of the thermal stratification interface are affected by the baffle ring devise. (3) Thermal stratification characteristics are not influenced very much by the installation of a partial inner barrel to the dipped plate, which is an effective measure to reduce the horizontal flow velocity components at free surface. (4) Labyrinth structures to the gap between the reactor vessel wall and the outer dipped plate have direct effects upon in-vessel thermal shock characteristics including thermal stratification phenomena due to the closing of flow path between the upper plenum and the free surface plenum. (author)

Novel biomarkers for risk stratification in pulmonary arterial hypertension

Directory of Open Access Journals (Sweden)

Thomas Zelniker

2015-10-01

Full Text Available Risk stratification in pulmonary arterial hypertension (PAH is paramount to identifying individuals at highest risk of death. So far, there are only limited parameters for prognostication in patients with PAH. 95 patients with confirmed PAH were included in the present analysis and followed for a total of 4 years. Blood samples were analysed for serum levels of N-terminal pro-brain natriuretic peptide, high-sensitivity troponin T (hsTnT, pro-atrial natriuretic peptide (proANP, growth differentiation factor 15, soluble fms-like tyrosine kinase 1 and placental growth factor. 27 (28.4% patients died during a follow-up of 4 years. Levels of all tested biomarkers, except for placental growth factor, were significantly elevated in nonsurvivors compared with survivors. Receiver operating characteristic analyses demonstrated that cardiac biomarkers had the highest power in predicting mortality. In particular, proANP exhibited the highest area under the curve, followed by N-terminal pro-brain natriuretic peptide and hsTnT. Furthermore, proANP and hsTnT added significant additive prognostic value to the established markers in categorical and continuous net reclassification index. Moreover, after Cox regression, proANP (hazard ratio (HR 1.91, hsTnT (HR 1.41, echocardiographic right ventricular impairment (HR 1.30 and 6-min walk test (HR 0.97 per 10 m remained the only significant parameters in prognostication of mortality. Our data suggest benefits of the implementation of proANP and hsTnT as additive biomarkers for risk stratification in patients with PAH.

Stochastic narrow escape in molecular and cellular biology analysis and applications

CERN Document Server

Holcman, David

2015-01-01

This book covers recent developments in the non-standard asymptotics of the mathematical narrow escape problem in stochastic theory, as well as applications of the narrow escape problem in cell biology. The first part of the book concentrates on mathematical methods, including advanced asymptotic methods in partial equations, and is aimed primarily at applied mathematicians and theoretical physicists who are interested in biological applications. The second part of the book is intended for computational biologists, theoretical chemists, biochemists, biophysicists, and physiologists. It includes a summary of output formulas from the mathematical portion of the book and concentrates on their applications in modeling specific problems in theoretical molecular and cellular biology. Critical biological processes, such as synaptic plasticity and transmission, activation of genes by transcription factors, or double-strained DNA break repair, are controlled by diffusion in structures that have both large and small sp...

Investigating Stratification within Higher Education through Examining the Status of Students in Different Academic Majors in Terms of Cultural, Social and Economic Capital

Science.gov (United States)

Hassani, Mohammad; Ghasemi, Seyyed Jamal Mir

2016-01-01

This study was carried out in order to explore the status of stratification within higher education through measuring cultural, economic and social capital of students in major academic disciplines across universities in Urmia, Northwestern Iran. The findings indicate that there are stratification structures in the presence of students in…

Stratification in Business and Agriculture Surveys with R

Directory of Open Access Journals (Sweden)

Marco Ballin

2016-06-01

Full Text Available Usually sample surveys on enterprises and farms adopt a one stage stratified sampling design. In practice the sampling frame is divided in non-overlapping strata and simple random sampling is carried out independently in each stratum. Stratification allows for reduction of the sampling error and permits to derive accurate estimates. Stratified sampling requires a number of decisions strictly related: (i how to stratify the population and how many strata to consider; (ii the size of the whole sample and corresponding partitioning among the strata (so called allocation. This paper will deal mainly with the problem (i and will show how to tackle it in the R environment using packages already available on the CRAN.

The Application of Template Selectophores for the Preparation of Molecularly Imprinted Polymers

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Basil Danylec

2015-09-01

Full Text Available Molecularly imprinted polymers are versatile materials with wide application scope for the detection, capture and separation of specific compounds present in complex feed stocks. A major challenge associated with their preparation has been the need to sacrifice one mole equivalent of the template molecule to generate the complementary polymer cavities that selectively bind the target molecule. Moreover, template molecules can often be difficult to synthesise, expensive or lack stability. In this study, we describe a new approach, directed at the use of synthetic selectophores, chosen as readily prepared and low cost structural analogues with recognition groups in similar three-dimensional arrangements as found in the target molecule. To validate the approach, a comparative study of selectophores related to the polyphenolic compound (E-resveratrol has been undertaken using traditional and green chemical synthetic approaches. These molecular mimic compounds were employed as polymer templates and also as binding analytes to interrogate the recognition sites associated with the molecularly imprinted polymers. Importantly, the study confirms that the use of selectophores has the potential to confer practical advantages, including access to more efficient methods for selection and preparation of suitable template molecules with a broader range of molecular diversity, as well as delivering imprinted polymers capable of recognizing the target compound and structurally related products.

Contributions to advances in blend pellet products (BPP) research on molecular structure and molecular nutrition interaction by advanced synchrotron and globar molecular (Micro)spectroscopy.

Science.gov (United States)

Guevara-Oquendo, Víctor H; Zhang, Huihua; Yu, Peiqiang

2018-04-13

To date, advanced synchrotron-based and globar-sourced techniques are almost unknown to food and feed scientists. There has been little application of these advanced techniques to study blend pellet products at a molecular level. This article aims to provide recent research on advanced synchrotron and globar vibrational molecular spectroscopy contributions to advances in blend pellet products research on molecular structure and molecular nutrition interaction. How processing induced molecular structure changes in relation to nutrient availability and utilization of the blend pellet products. The study reviews Utilization of co-product components for blend pellet product in North America; Utilization and benefits of inclusion of pulse screenings; Utilization of additives in blend pellet products; Application of pellet processing in blend pellet products; Conventional evaluation techniques and methods for blend pellet products. The study focus on recent applications of cutting-edge vibrational molecular spectroscopy for molecular structure and molecular structure association with nutrient utilization in blend pellet products. The information described in this article gives better insight on how advanced molecular (micro)spectroscopy contributions to advances in blend pellet products research on molecular structure and molecular nutrition interaction.

Electronic sputtering of large organic molecules and its application in bio molecular mass spectrometry

International Nuclear Information System (INIS)

Sundqvist, B.U.R.

1992-01-01

This is a review of research which has its origin in the discovery of Plasma Desorption Mass Spectrometry (PDMS). Two main fields of research have developed, namely fundamental studies of the ejection process at fast ion impact and studies of applications of the new mass spectrometric technique. In this review the emphasis will be on the process of electronic sputtering of organic solids but also applications of this process in bio molecular mass spectrometry will be discussed. (author)

Molecular self-assembly advances and applications

CERN Document Server

Dequan, Alex Li

2012-01-01

In the past several decades, molecular self-assembly has emerged as one of the main themes in chemistry, biology, and materials science. This book compiles and details cutting-edge research in molecular assemblies ranging from self-organized peptide nanostructures and DNA-chromophore foldamers to supramolecular systems and metal-directed assemblies, even to nanocrystal superparticles and self-assembled microdevices

Double stratification effects in chemically reactive squeezed Sutterby fluid flow with thermal radiation and mixed convection

Science.gov (United States)

Ahmad, S.; Farooq, M.; Javed, M.; Anjum, Aisha

2018-03-01

A current analysis is carried out to study theoretically the mixed convection characteristics in squeezing flow of Sutterby fluid in squeezed channel. The constitutive equation of Sutterby model is utilized to characterize the rheology of squeezing phenomenon. Flow characteristics are explored with dual stratification. In flowing fluid which contains heat and mass transport, the first order chemical reaction and radiative heat flux affect the transport phenomenon. The systems of non-linear governing equations have been modulating which then solved by mean of convergent approach (Homotopy Analysis Method). The graphs are reported and illustrated for emerging parameters. Through graphical explanations, drag force, rate of heat and mass transport are conversed for different pertinent parameters. It is found that heat and mass transport rate decays with dominant double stratified parameters and chemical reaction parameter. The present two-dimensional examination is applicable in some of the engineering processes and industrial fluid mechanics.

Controlling the transmission line shape of molecular t-stubs and potential thermoelectric applications

DEFF Research Database (Denmark)

Stadler, Robert; Markussen, Troels

2011-01-01

Asymmetric line shapes can occur in the transmission function describing electron transport in the vicinity of a minimum caused by quantum interference effects. Such asymmetry can be used to increase the thermoelectric efficiency of molecular junctions. So far, however, asymmetric line shapes hav...... calculations for a variety of t-stub molecules and also address their suitability for thermoelectric applications....

Transcriptome classification reveals molecular subtypes in psoriasis

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Ainali Chrysanthi

2012-09-01

Full Text Available Abstract Background Psoriasis is an immune-mediated disease characterised by chronically elevated pro-inflammatory cytokine levels, leading to aberrant keratinocyte proliferation and differentiation. Although certain clinical phenotypes, such as plaque psoriasis, are well defined, it is currently unclear whether there are molecular subtypes that might impact on prognosis or treatment outcomes. Results We present a pipeline for patient stratification through a comprehensive analysis of gene expression in paired lesional and non-lesional psoriatic tissue samples, compared with controls, to establish differences in RNA expression patterns across all tissue types. Ensembles of decision tree predictors were employed to cluster psoriatic samples on the basis of gene expression patterns and reveal gene expression signatures that best discriminate molecular disease subtypes. This multi-stage procedure was applied to several published psoriasis studies and a comparison of gene expression patterns across datasets was performed. Conclusion Overall, classification of psoriasis gene expression patterns revealed distinct molecular sub-groups within the clinical phenotype of plaque psoriasis. Enrichment for TGFb and ErbB signaling pathways, noted in one of the two psoriasis subgroups, suggested that this group may be more amenable to therapies targeting these pathways. Our study highlights the potential biological relevance of using ensemble decision tree predictors to determine molecular disease subtypes, in what may initially appear to be a homogenous clinical group. The R code used in this paper is available upon request.

Molecular theory of partial molar volume and its applications to biomolecular systems

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T.Imai

2007-09-01

Full Text Available The paial molar volume (PMV is a thermodynamic quantity which contains important information about the solute-solvent interactions as well as the solute structure in solution.Additionally, the PMV is the most essential quantity in the analysis of the pressure effect on chemical reactions. This aicle reviews the recent developments in molecular theories of the PMV, especially the reference interaction site model (RISMtheory of molecular liquids and its three-dimensional generalization version (3D-RISM, which are combined with the Kirkwood-Buff solution theory to calculate the PMV. This aicle also introduces our recent applications of the theory to some interesting issues concerning the PMV of biomolecules. In addition, theoretical representations of the effects of intramolecular fluctuation on the PMV, which are significant for biomacromolecules, are briefly discussed.

Horizontal Stratification in Access to Danish University Programs by Institution and Field of Study

DEFF Research Database (Denmark)

Munk, Martin D.; Thomsen, Jens Peter

2012-01-01

In this paper we use register data to investigate social stratification within fields of study and university institutions in Denmark. We argue firstly, that it is important to utilize a relatively detailed classification of parents’ occupation, in order to single out how students are endowed wit...

Pan-cancer stratification of solid human epithelial tumors and cancer cell lines reveals commonalities and tissue-specific features of the CpG island methylator phenotype.

Science.gov (United States)

Sánchez-Vega, Francisco; Gotea, Valer; Margolin, Gennady; Elnitski, Laura

2015-01-01

The term CpG island methylator phenotype (CIMP) has been used to describe widespread DNA hypermethylation at CpG-rich genomic regions affecting clinically distinct subsets of cancer patients. Even though there have been numerous studies of CIMP in individual cancer types, a uniform analysis across tissues is still lacking. We analyze genome-wide patterns of CpG island hypermethylation in 5,253 solid epithelial tumors from 15 cancer types from TCGA and 23 cancer cell lines from ENCODE. We identify differentially methylated loci that define CIMP+ and CIMP- samples, and we use unsupervised clustering to provide a robust molecular stratification of tumor methylomes for 12 cancer types and all cancer cell lines. With a minimal set of 89 discriminative loci, we demonstrate accurate pan-cancer separation of the 12 CIMP+/- subpopulations, based on their average levels of methylation. Tumor samples in different CIMP subclasses show distinctive correlations with gene expression profiles and recurrence of somatic mutations, copy number variations, and epigenetic silencing. Enrichment analyses indicate shared canonical pathways and upstream regulators for CIMP-targeted regions across cancer types. Furthermore, genomic alterations showing consistent associations with CIMP+/- status include genes involved in DNA repair, chromatin remodeling genes, and several histone methyltransferases. Associations of CIMP status with specific clinical features, including overall survival in several cancer types, highlight the importance of the CIMP+/- designation for individual tumor evaluation and personalized medicine. We present a comprehensive computational study of CIMP that reveals pan-cancer commonalities and tissue-specific differences underlying concurrent hypermethylation of CpG islands across tumors. Our stratification of solid tumors and cancer cell lines based on CIMP status is data-driven and agnostic to tumor type by design, which protects against known biases that have hindered

Natural circulation and stratification in the various passive safety systems of the SWR 1000

International Nuclear Information System (INIS)

Meseth, J.

2002-01-01

In some of the passive safety systems of Siemens' SWR 1000 boiling water reactor (i.e. the emergency condensers and containment cooling condensers), natural circulation is the main effect on both the primary and secondary sides by which optimum system efficiency is achieved. Other passive safety systems of the SWR 1000 require natural circulation on the secondary side only (condensation of steam discharged by the safety and relief valves; cooling of the Reactor Pressure Vessel (RPV) by flooding from the outside in case of core melt), while still other systems require stratification to be effective (i.e. the passive pressure pulse transmitters and steam-driven scram tanks). Complex natural circulation and stratification can take place simultaneously if fluids with different densities are enclosed in a single volume (in a core melt accident, for example, the nitrogen, steam and hydrogen in the containment). Related problems and the solutions thereto planned for the SWR 1000 are reported from the designer's viewpoint. (author)

Stratification and space-time variability of Red Sea hot brines

Energy Technology Data Exchange (ETDEWEB)

Monin, A S; Plakhin, E A

1982-11-01

The results of hydrophysical studies in Red Sea hot brines prefaced with historical information are presented. The CTD-recorder readings show stratification of the upper brine in the Atlantis II Deep into meter-scale layers, in agreement with laboratory findings. Repeated soundings with the AIST CTD meter of the upper brine interface in the Valdivia Deep recorded internal waves of 3 to 4-h periods. The observations show the different nature of brines in the four deeps studied and the lack of contact between the brine layers of the Chain and Discovery deeps.

Thermal stratification effects on MHD radiative flow of nanofluid over nonlinear stretching sheet with variable thickness

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Yahaya Shagaiya Daniel

2018-04-01

Full Text Available The combined effects of thermal stratification, applied electric and magnetic fields, thermal radiation, viscous dissipation and Joules heating are numerically studied on a boundary layer flow of electrical conducting nanofluid over a nonlinearly stretching sheet with variable thickness. The governing equations which are partial differential equations are converted to a couple of ordinary differential equations with suitable similarity transformation techniques and are solved using implicit finite difference scheme. The electrical conducting nanofluid particle fraction on the boundary is passively rather than actively controlled. The effects of the emerging parameters on the electrical conducting nanofluid velocity, temperature, and nanoparticles concentration volume fraction with skin friction, heat transfer characteristics are examined with the aids of graphs and tabular form. It is observed that the variable thickness enhances the fluid velocity, temperature, and nanoparticle concentration volume fraction. The heat and mass transfer rate at the surface increases with thermal stratification resulting to a reduction in the fluid temperature. Electric field enhances the nanofluid velocity which resolved the sticking effects caused by a magnetic field which suppressed the profiles. Radiative heat transfer and viscous dissipation are sensitive to an increase in the fluid temperature and thicker thermal boundary layer thickness. Comparison with published results is examined and presented. Keywords: MHD nanofluid, Variable thickness, Thermal radiation, Similarity solution, Thermal stratification

Molecular pathology and prostate cancer therapeutics: from biology to bedside.

Science.gov (United States)

Rodrigues, Daniel Nava; Butler, Lisa M; Estelles, David Lorente; de Bono, Johann S

2014-01-01

Prostate cancer (PCa) is the second most commonly diagnosed malignancy in men and has an extremely heterogeneous clinical behaviour. The vast majority of PCas are hormonally driven diseases in which androgen signalling plays a central role. The realization that castration-resistant prostate cancer (CRPC) continues to rely on androgen signalling prompted the development of new, effective androgen blocking agents. As the understanding of the molecular biology of PCas evolves, it is hoped that stratification of prostate tumours into distinct molecular entities, each with its own set of vulnerabilities, will be a feasible goal. Around half of PCas harbour rearrangements involving a member of the ETS transcription factor family. Tumours without this rearrangement include SPOP mutant as well as SPINK1-over-expressing subtypes. As the number of targeted therapy agents increases, it is crucial to determine which patients will benefit from these interventions and molecular pathology will be key in this respect. In addition to directly targeting cells, therapies that modify the tumour microenvironment have also been successful in prolonging the lives of PCa patients. Understanding the molecular aspects of PCa therapeutics will allow pathologists to provide core recommendations for patient management. Copyright © 2013 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Application of molecular biology of differentiated thyroid cancer for clinical prognostication.

Science.gov (United States)

Marotta, Vincenzo; Sciammarella, Concetta; Colao, Annamaria; Faggiano, Antongiulio

2016-11-01

Although cancer outcome results from the interplay between genetics and environment, researchers are making a great effort for applying molecular biology in the prognostication of differentiated thyroid cancer (DTC). Nevertheless, role of molecular characterisation in the prognostic setting of DTC is still nebulous. Among the most common and well-characterised genetic alterations related to DTC, including mutations of BRAF and RAS and RET rearrangements, BRAF V600E is the only mutation showing unequivocal association with clinical outcome. Unfortunately, its accuracy is strongly limited by low specificity. Recently, the introduction of next-generation sequencing techniques led to the identification of TERT promoter and TP53 mutations in DTC. These genetic abnormalities may identify a small subgroup of tumours with highly aggressive behaviour, thus improving specificity of molecular prognostication. Although knowledge of prognostic significance of TP53 mutations is still anecdotal, mutations of the TERT promoter have showed clear association with clinical outcome. Nevertheless, this genetic marker needs to be analysed according to a multigenetic model, as its prognostic effect becomes negligible when present in isolation. Given that any genetic alteration has demonstrated, taken alone, enough specificity, the co-occurrence of driving mutations is emerging as an independent genetic signature of aggressiveness, with possible future application in clinical practice. DTC prognostication may be empowered in the near future by non-tissue molecular prognosticators, including circulating BRAF V600E and miRNAs. Although promising, use of these markers needs to be refined by the technical sight, and the actual prognostic value is still yet to be validated. © 2016 Society for Endocrinology.

Drought tolerance associated with vertical stratification of two co-occurring epiphytic bromeliads in a tropical dry forest.

Science.gov (United States)

Graham, Eric A; Andrade, Jose Luis

2004-05-01

Vertical stratification of epiphytes generally has not been reported for dry forests. For two epiphytic Crassulacean acid metabolism bromeliads that segregate vertically, it was hypothesized that different potentials for photoprotection or shade tolerance rather than drought tolerance is responsible for the observed stratification. The light environment, capacity for photoprotection, germination response to light quality, and responses to light and drought were thus examined for Tillandsia brachycaulos and T. elongata. Vertical and light-environment distributions differed for the two species but photoprotection and photodamage did not where they occurred at similar field locations; T. brachycaulos had a higher pigment acclimation to light. Tillandsia brachycaulos had higher acid accumulation under low light as opposed to T. elongata, which responded similarly to all but the highest light treatment. Tillandsia brachycaulos maintained positive total daily net CO(2) uptake through 30 d of drought; T. elongata had a total daily net CO(2) loss after 7 d of drought. The vertical stratification was most likely the result of the sensitivity to drought of T. elongata rather than differences in photoprotection or shade tolerance between the two species. Tillandsia elongata occurs in more exposed locations, which may be advantageous for rainfall interception and dew formation.

Potential applications of luminescent molecular rotors in food science and engineering.

Science.gov (United States)

Alhassawi, Fatemah M; Corradini, Maria G; Rogers, Michael A; Ludescher, Richard D

2017-06-29

Fluorescent molecular rotors (MRs) are compounds whose emission is modulated by segmental mobility; photoexcitation generates a locally excited (LE), planar state that can relax either by radiative decay (emission of a photon) or by formation of a twisted intramolecular charge transfer (TICT) state that can relax nonradiatively due to internal rotation. If the local environment around the probe allows for rapid internal rotation in the excited state, fast non-radiative decay can either effectively quench the fluorescence or generate a second, red-shifted emission band. Conversely, any environmental restriction to twisting in the excited state due to free volume, crowding or viscosity, slows rotational relaxation and promotes fluorescence emission from the LE state. The environmental sensitivity of MRs has been exploited extensively in biological applications to sense microviscosity in biofluids, the stability and physical state of biomembranes, and conformational changes in macromolecules. The application of MRs in food research, however, has been only marginally explored. In this review, we summarize the main characteristics of fluorescent MRs, their current applications in biological research and their current and potential applications as sensors of physical properties in food science and engineering.

Numerical modeling of flows and pollutant dispersion within and above urban street canyons under unstable thermal stratification by large-eddy simulation

Science.gov (United States)

Chan, Ming-Chung; Liu, Chun-Ho

2013-04-01

Recently, with the ever increasing urban areas in developing countries, the problem of air pollution due to vehicular exhaust arouses the concern of different groups of people. Understanding how different factors, such as urban morphology, meteorological conditions and human activities, affect the characteristics of street canyon ventilation, pollutant dispersion above urban areas and pollutant re-entrainment from the shear layer can help us improve air pollution control strategies. Among the factors mentioned above, thermal stratification is a significant one determining the pollutant transport behaviors in certain situation, e.g. when the urban surface is heated by strong solar radiation, which, however, is still not widely explored. The objective of this study is to gain an in-depth understanding of the effects of unstable thermal stratification on the flows and pollutant dispersion within and above urban street canyons through numerical modeling using large-eddy simulation (LES). In this study, LES equipped with one-equation subgrid-scale (SGS) model is employed to model the flows and pollutant dispersion within and above two-dimensional (2D) urban street canyons (flanked by idealized buildings, which are square solid bars in these models) under different intensities of unstable thermal stratifications. Three building-height-to-street-width (aspect) ratios, 0.5, 1 and 2, are included in this study as a representation of different building densities. The prevailing wind flow above the urban canopy is driven by background pressure gradient, which is perpendicular to the street axis, while the condition of unstable thermal stratification is induced by applying a higher uniform temperature on the no-slip urban surface. The relative importance between stratification and background wind is characterized by the Richardson number, with zero value as a neutral case and negative value as an unstable case. The buoyancy force is modeled by Boussinesq approximation and the

Stratification of mixtures in evaporating liquid films occurs only for a range of volume fractions of the smaller component

Science.gov (United States)

Sear, Richard P.

2018-04-01

I model the drying of a liquid film containing small and big colloid particles. Fortini et al. [Phys. Rev. Lett. 116, 118301 (2016)] studied these films with both computer simulation and experiment. They found that at the end of drying, the mixture had stratified with a layer of the smaller particles on top of the big particles. I develop a simple model for this process. The model has two ingredients: arrest of the diffusion of the particles at high density and diffusiophoretic motion of the big particles due to gradients in the volume fraction of the small particles. The model predicts that stratification only occurs over a range of initial volume fractions of the smaller colloidal species. Above and below this range, the downward diffusiophoretic motion of the big particles is too slow to remove the big particles from the top of the film, and so there is no stratification. In agreement with earlier work, the model also predicts that large Péclet numbers for drying are needed to see stratification.

Cytogenetic and molecular abnormalities in chronic myelomonocytic leukemia

International Nuclear Information System (INIS)

Patnaik, M M; Tefferi, A

2016-01-01

Chronic myelomonocytic leukemia (CMML) is a clonal stem cell disorder associated with peripheral blood monocytosis and an inherent tendency to transform to acute myeloid leukemia. CMML has overlapping features of myelodysplastic syndromes and myeloproliferative neoplasms. Clonal cytogenetic changes are seen in ~30%, whereas gene mutations are seen in >90% of patients. Common cytogenetic abnormalities include; trisomy 8, -Y, -7/del(7q), trisomy 21 and del(20q), with the Mayo–French risk stratification effectively risk stratifying patients based on cytogenetic abnormalities. Gene mutations frequently involve epigenetic regulators (TET2 ~60%), modulators of chromatin (ASXL1 ~40%), spliceosome components (SRSF2 ~50%), transcription factors (RUNX1 ~15%) and signal pathways (RAS ~30%, CBL ~15%). Of these, thus far, only nonsense and frameshift ASXL1 mutations have been shown to negatively impact overall survival. This has resulted in the development of contemporary, molecularly integrated (inclusive of ASXL1 mutations) CMML prognostic models, including Molecular Mayo Model and the Groupe Français des Myélodysplasies model. Better understanding of the prevalent genetic and epigenetic dysregulation has resulted in emerging targeted treatment options for some patients. The development of an integrated (cytogenetic and molecular) prognostic model along with CMML-specific response assessment criteria are much needed future goals

Piezoelectric sensors based on molecular imprinted polymers for detection of low molecular mass analytes.

Science.gov (United States)

Uludağ, Yildiz; Piletsky, Sergey A; Turner, Anthony P F; Cooper, Matthew A

2007-11-01

Biomimetic recognition elements employed for the detection of analytes are commonly based on proteinaceous affibodies, immunoglobulins, single-chain and single-domain antibody fragments or aptamers. The alternative supra-molecular approach using a molecularly imprinted polymer now has proven utility in numerous applications ranging from liquid chromatography to bioassays. Despite inherent advantages compared with biochemical/biological recognition (which include robustness, storage endurance and lower costs) there are few contributions that describe quantitative analytical applications of molecularly imprinted polymers for relevant small molecular mass compounds in real-world samples. There is, however, significant literature describing the use of low-power, portable piezoelectric transducers to detect analytes in environmental monitoring and other application areas. Here we review the combination of molecularly imprinted polymers as recognition elements with piezoelectric biosensors for quantitative detection of small molecules. Analytes are classified by type and sample matrix presentation and various molecularly imprinted polymer synthetic fabrication strategies are also reviewed.

Risk stratification in secondary cardiovascular prevention.

Science.gov (United States)

Lazzeroni, Davide; Coruzzi, Paolo

2018-02-19

Worldwide, more than 7 million people experience acute myocardial infarction (AMI) every year (1), and although substantial reduction in mortality has been obtained in recent decades, one-year mortality rates are still in the range of 10%. Among patients who survive AMI, 20% suffer a second cardiovascular event in the first year and approximately 50% of major coronary events occur in those with a previous hospital discharge diagnosis of AMI (2). Despite the evidence that lifestyle changes and risk factors management strongly improve long-term prognosis, preventive care post-AMI remains sub-optimal. Cross-sectional data from the serially conducted EUROASPIRE surveys in patients with established ischemic heart disease (IHD) and people at high cardiovascular risk have demonstrated a high prevalence of unhealthy lifestyle, modifiable risk factors and inadequate use of drug therapies to achieve blood pressure and lipid goals (3). Secondary prevention programmes, defined as the level of preventive care focusing on early risk stratification, are highly recommended in all IHD patients, to restore quality of life, maintain or improve functional capacity and prevent recurrence.

Syncope: risk stratification and clinical decision making.

Science.gov (United States)

Peeters, Suzanne Y G; Hoek, Amber E; Mollink, Susan M; Huff, J Stephen

2014-04-01

Syncope is a common occurrence in the emergency department, accounting for approximately 1% to 3% of presentations. Syncope is best defined as a brief loss of consciousness and postural tone followed by spontaneous and complete recovery. The spectrum of etiologies ranges from benign to life threatening, and a structured approach to evaluating these patients is key to providing care that is thorough, yet cost-effective. This issue reviews the most relevant evidence for managing and risk stratifying the syncope patient, beginning with a focused history, physical examination, electrocardiogram, and tailored diagnostic testing. Several risk stratification decision rules are compared for performance in various scenarios, including how age and associated comorbidities may predict short-term and long-term adverse events. An algorithm for structured, evidence-based care of the syncope patient is included to ensure that patients requiring hospitalization are managed appropriately and those with benign causes are discharged safely.

Adrenocortical carcinoma: the dawn of a new era of genomic and molecular biology analysis.

Science.gov (United States)

Armignacco, R; Cantini, G; Canu, L; Poli, G; Ercolino, T; Mannelli, M; Luconi, M

2018-05-01

Over the last decade, the development of novel and high penetrance genomic approaches to analyze biological samples has provided very new insights in the comprehension of the molecular biology and genetics of tumors. The use of these techniques, consisting of exome sequencing, transcriptome, miRNome, chromosome alteration, genome, and epigenome analysis, has also been successfully applied to adrenocortical carcinoma (ACC). In fact, the analysis of large cohorts of patients allowed the stratification of ACC with different patterns of molecular alterations, associated with different outcomes, thus providing a novel molecular classification of the malignancy to be associated with the classical pathological analysis. Improving our knowledge about ACC molecular features will result not only in a better diagnostic and prognostic accuracy, but also in the identification of more specific therapeutic targets for the development of more effective pharmacological anti-cancer approaches. In particular, the specific molecular alteration profiles identified in ACC may represent targetable events by the use of already developed or newly designed drugs enabling a better and more efficacious management of the ACC patient in the context of new frontiers of personalized precision medicine.

Mutational profiling in patients with MDS: ready for every-day use in the clinic?

Science.gov (United States)

Bacher, Ulrike; Kohlmann, Alexander; Haferlach, Torsten

2015-03-01

Multiple recurrent somatic mutations were identified in the majority of patients with myelodysplastic syndromes (MDS), but investigating the broad spectrum of molecular markers in MDS exceeds many laboratories' capacity when traditional molecular techniques are used. High-throughput second generation sequencing (=next-generation sequencing, NGS) has proven to be applicable for comprehensive biomarker mutation analyses allowing to increase diagnostic sensitivity and accuracy and to improve risk stratification and prognostication in addition to cytomorphology and cytogenetic analysis in patients with MDS. Amplicon deep-sequencing enables comprehensive biomarker analysis in a multitude of patients per investigation in an acceptable turn-around time and at affordable costs. Comprehensive myeloid marker panels were successfully introduced into diagnostic practice. Therefore, molecular mutation analysis is ready for use in all patients with suspected MDS, may contribute to risk stratification in possible candidates for allogeneic stem cell transplantation, and should become an integral part of clinical research studies in MDS patients. Copyright © 2014 Elsevier Ltd. All rights reserved.

Molecular decompostition of anisotropic homogeneous mixed-norm spaces with applications to the boundedness of operators

DEFF Research Database (Denmark)

Cleanthous, Galatia; Georgiadis, Athanasios; Nielsen, Morten

2018-01-01

. Molecular decompositions for all the considered spaces are derived with the help of the algebra of almost diagonal operators. As an application, we obtain boundedness results on the considered spaces for Fourier multipliers and for pseudodifferential operators with suitable adapted homogeneous symbols using...

Metabolomic applications to decipher gut microbial metabolic influence in health and disease

Directory of Open Access Journals (Sweden)

Francois-Pierre eMartin

2012-04-01

Full Text Available Dietary preferences and nutrients composition have been shown to influence human and gut microbial metabolism, which ultimately has specific effects on health and diseases’ risk. Increasingly, results from molecular biology and microbiology demonstrate the key role of the gut microbiota metabolic interface to the overall mammalian host’s health status. There is therefore raising interest in nutrition research to characterize the molecular foundations of the gut microbial mammalian cross-talk at both physiological and biochemical pathway levels. Tackling these challenges can be achieved through systems biology approaches, such as metabolomics, to underpin the highly complex metabolic exchanges between diverse biological compartments, including organs, systemic biofluids and microbial symbionts. By the development of specific biomarkers for prediction of health and disease, metabolomics is increasingly used in clinical applications as regard to disease aetiology, diagnostic stratification and potentially mechanism of action of therapeutical and nutraceutical solutions. Surprisingly, an increasing number of metabolomics investigations in pre-clinical and clinical studies based on proton nuclear magnetic resonance (1H NMR spectroscopy and mass spectrometry (MS provided compelling evidence that system wide and organ-specific biochemical processes are under the influence of gut microbial metabolism. This review aims at describing recent applications of metabolomics in clinical fields where main objective is to discern the biochemical mechanisms under the influence of the gut microbiota, with insight into gastrointestinal health and diseases diagnostics and improvement of homeostasis metabolic regulation.

Spectrally selective molecular doped solids: spectroscopy, photophysics and their application to ultrafast optical pulse processing

International Nuclear Information System (INIS)

Galaup, Jean-Pierre

2005-01-01

The persistent spectral hole-burning (PSHB) phenomenon observed in molecular doped polymers cooled down to liquid helium temperatures allows the engraving of spectral structures in the inhomogeneous absorption profile of the material. This phenomenon known since 1974 has became a fruitful field for the study of the intimacy of complex molecular systems in the solid state, revealing high-resolution spectroscopy, photophysics, photochemistry and dynamics of molecular doped amorphous media, organic as well as inorganic. A PSHB molecular doped solid can be programmed in spectral domain and therefore, it can be converted in an optical processor capable to achieve user-defined optical functions. Some aspects of this field are illustrated in the present paper. An application is presented where a naphthalocyanine doped polymer film is used in a demonstrative experiment to prove that temporal aberration free re-compression of ultra-short light pulses is feasible. Perspectives for the coherent control of light fields or photochemical processes are also evoked

Formation of the UV Spectrum of Molecular Hydrogen in the Sun

Science.gov (United States)

Jaeggli, S. A.; Judge, P. G.; Daw, A. N.

2018-03-01

Ultraviolet (UV) lines of molecular hydrogen have been observed in solar spectra for almost four decades, but the behavior of the molecular spectrum and its implications for solar atmospheric structure are not fully understood. Data from the High-Resolution Telescope Spectrometer (HRTS) instrument revealed that H2 emission forms in particular regions, selectively excited by a bright UV transition region and chromospheric lines. We test the conditions under which H2 emission can originate by studying non-LTE models, sampling a broad range of temperature stratifications and radiation conditions. Stratification plays the dominant role in determining the population densities of H2, which forms in greatest abundance near the continuum photosphere. However, opacity due to the photoionization of Si and other neutrals determines the depth to which UV radiation can penetrate to excite the H2. Thus the majority of H2 emission forms in a narrow region, at about 650 km in standard one-dimensional (1D) models of the quiet Sun, near the τ = 1 opacity surface for the exciting UV radiation, generally coming from above. When irradiated from above using observed intensities of bright UV emission lines, detailed non-LTE calculations show that the spectrum of H2 seen in the quiet-Sun Solar Ultraviolet Measurement of Emitted Radiation atlas spectrum and HRTS light-bridge spectrum can be satisfactorily reproduced in 1D stratified atmospheres, without including three-dimensional or time-dependent thermal structures. A detailed comparison to observations from 1205 to 1550 Å is presented, and the success of this 1D approach to modeling solar UV H2 emission is illustrated by the identification of previously unidentified lines and upper levels in HRTS spectra.

Theoretical Study of Copper Complexes: Molecular Structure, Properties, and Its Application to Solar Cells

Directory of Open Access Journals (Sweden)

Jesus Baldenebro-Lopez

2013-01-01

Full Text Available We present a theoretical investigation of copper complexes with potential applications as sensitizers for solar cells. The density functional theory (DFT and time-dependent DFT were utilized, using the M06 hybrid meta-GGA functional with the LANL2DZ (D95V on first row and DZVP basis sets. This level of calculation was used to find the optimized molecular structure, the absorption spectra, the molecular orbitals energies, and the chemical reactivity parameters that arise from conceptual DFT. Solvent effects have been taken into account by an implicit approach, namely, the polarizable continuum model (PCM, using the nonequilibrium version of the IEF-PCM model.

On the application of the expected log-likelihood gain to decision making in molecular replacement.

Science.gov (United States)

Oeffner, Robert D; Afonine, Pavel V; Millán, Claudia; Sammito, Massimo; Usón, Isabel; Read, Randy J; McCoy, Airlie J

2018-04-01

Molecular-replacement phasing of macromolecular crystal structures is often fast, but if a molecular-replacement solution is not immediately obtained the crystallographer must judge whether to pursue molecular replacement or to attempt experimental phasing as the quickest path to structure solution. The introduction of the expected log-likelihood gain [eLLG; McCoy et al. (2017), Proc. Natl Acad. Sci. USA, 114, 3637-3641] has given the crystallographer a powerful new tool to aid in making this decision. The eLLG is the log-likelihood gain on intensity [LLGI; Read & McCoy (2016), Acta Cryst. D72, 375-387] expected from a correctly placed model. It is calculated as a sum over the reflections of a function dependent on the fraction of the scattering for which the model accounts, the estimated model coordinate error and the measurement errors in the data. It is shown how the eLLG may be used to answer the question `can I solve my structure by molecular replacement?'. However, this is only the most obvious of the applications of the eLLG. It is also discussed how the eLLG may be used to determine the search order and minimal data requirements for obtaining a molecular-replacement solution using a given model, and for decision making in fragment-based molecular replacement, single-atom molecular replacement and likelihood-guided model pruning.

The developments and applications of molecular nuclear medicine

International Nuclear Information System (INIS)

Fang Shengwei; Xi Wang; Zhang Hong

2009-01-01

Molecular nuclear medicine including PET and SPECT is one of the most important parts of the molecular imaging. The combinations of molecular unclear medicine with CT, MRI, ultrasound or optical imaging and synthesis of multimodality radiopharmaceuticals are the major trends of the development of nuclear medicine. Molecular nuclear medicine has more and more and more important value on the monitoring of response to biology involved gene therapy or stem cell therapy and the developments of new drug. (authors)

The development of monitoring techniques for thermal stratification in nuclear plant piping

International Nuclear Information System (INIS)

Sim, Cheul Muu; Joo, Young Sang; Yoon, Kwang Sik; Park, Chi Seung; Choi, Ha Lim; Moon, Jae Wha; Bae, Sang Ho.

1996-12-01

The conventional nondestructive testing has been performed in those area which are susceptible to thermal stress in according to NRC 88-08,11. In addition to that, it is necessary to set up a monitoring system to prevent severe thermal stress to pipes in early stages and to develop the non-intrusive techniques to diagnose the check valve because the thermal stratification has been caused by the malfunction of the check valve in ECCS pipe. Thermal stratification monitoring system has been designed and installed at ECCS line permanently and surge line temporally in YG nuclear power plant. The data is acceptable in according to TASCS guide line. Also, the data originated from ISMS is useful for the arrangement of a special UT program and stress analysis. Applying a togetherness of acoustics and magnetics signal, it is possible to determine the parameters of the function of the check valve internals without disassembling it. This series of tests show that the accelerometers can be use d to measure and to differentiate the three types of impacts; metal to metal impacts mechanical rubs, and worn internal parts. The magnet sensors can be used to detect the opening/closing of stainless check and fluttering of disk. (author). 50 refs., 5 tabs., 28 figs

Numerical simulation of thermal stratification in cold legs by using openFOAM

International Nuclear Information System (INIS)

Cai, Jiejin; Watanabe, Tadashi

2010-01-01

During a small-break loss-of-coolant accident in pressurized water reactors (PWRs), emergency core cooling system (ECCS) is actuated and cold water is injected into cold legs. Insufficient mixing of injected cold water and hot primary coolant results in thermal stratification, which is a matter of concern for evaluation of pressurized thermal shock (PTS) in view of aging and life extension of nuclear power plants. In this study, an open source CFD software, OpenFOAM, is used to simulate mixing and thermal stratification in the cold leg of ROSA/LSTF, which is the largest thermal-hydraulic integral test facility simulating PWR. One of the cold-leg is numerically simulated from the outlet of primary coolant pump to the inlet of downcomer. ECCS water is injected from injection nozzle connected at the top of the cold leg into the steady-state natural circulation flow under high-pressure and high-temperature conditions. The temperature distribution in the cold leg is compared with experimental and FLUENT's results. Effects of turbulent flow models and secondary flow due to the elbow section of the cold leg are discussed for the case with the single-phase natural circulation. Injection into a two-phase stratified flow is also simulated and predictive and numerical capabilities of OpenFOAM are discussed. (author)

The development of monitoring techniques for thermal stratification in nuclear plant piping

Energy Technology Data Exchange (ETDEWEB)

Sim, Cheul Muu; Joo, Young Sang; Yoon, Kwang Sik; Park, Chi Seung; Choi, Ha Lim; Moon, Jae Wha; Bae, Sang Ho

1996-12-01

The conventional nondestructive testing has been performed in those area which are susceptible to thermal stress in according to NRC 88-08,11. In addition to that, it is necessary to set up a monitoring system to prevent severe thermal stress to pipes in early stages and to develop the non-intrusive techniques to diagnose the check valve because the thermal stratification has been caused by the malfunction of the check valve in ECCS pipe. Thermal stratification monitoring system has been designed and installed at ECCS line permanently and surge line temporally in YG nuclear power plant. The data is acceptable in according to TASCS guide line. Also, the data originated from ISMS is useful for the arrangement of a special UT program and stress analysis. Applying a togetherness of acoustics and magnetics signal, it is possible to determine the parameters of the function of the check valve internals without disassembling it. This series of tests show that the accelerometers can be use d to measure and to differentiate the three types of impacts; metal to metal impacts mechanical rubs, and worn internal parts. The magnet sensors can be used to detect the opening/closing of stainless check and fluttering of disk. (author). 50 refs., 5 tabs., 28 figs.

Shaped Goals: Teaching Undergraduates the Effects of Social Stratification on the Formulation of Goals

Science.gov (United States)

Touzard, Giselle

2009-01-01

This article describes an in-class activity that helps undergraduate students to understand the effects of their socio-economic position on the formulation, pursuit, and achievement of goals. Social stratification and inequality have an initial impact on the formulation of goals. Through this exercise students will perceive the effects of having a…

A novel approach to population-based risk stratification, comprising individualized lifestyle intervention in Danish general practice to prevent chronic diseases

DEFF Research Database (Denmark)

Bruun Larsen, Lars; Søndergaard, Jens; Halling, Anders

2017-01-01

Early detection of patients at risk seems to be effective for reducing the prevalence of lifestyle-related chronic diseases. We aim to test the feasibility of a novel intervention for early detection of lifestyle-related chronic diseases based on a population-based stratification using a combinat......Early detection of patients at risk seems to be effective for reducing the prevalence of lifestyle-related chronic diseases. We aim to test the feasibility of a novel intervention for early detection of lifestyle-related chronic diseases based on a population-based stratification using...

Postischemic revascularization: from cellular and molecular mechanisms to clinical applications.

Science.gov (United States)

Silvestre, Jean-Sébastien; Smadja, David M; Lévy, Bernard I

2013-10-01

After the onset of ischemia, cardiac or skeletal muscle undergoes a continuum of molecular, cellular, and extracellular responses that determine the function and the remodeling of the ischemic tissue. Hypoxia-related pathways, immunoinflammatory balance, circulating or local vascular progenitor cells, as well as changes in hemodynamical forces within vascular wall trigger all the processes regulating vascular homeostasis, including vasculogenesis, angiogenesis, arteriogenesis, and collateral growth, which act in concert to establish a functional vascular network in ischemic zones. In patients with ischemic diseases, most of the cellular (mainly those involving bone marrow-derived cells and local stem/progenitor cells) and molecular mechanisms involved in the activation of vessel growth and vascular remodeling are markedly impaired by the deleterious microenvironment characterized by fibrosis, inflammation, hypoperfusion, and inhibition of endogenous angiogenic and regenerative programs. Furthermore, cardiovascular risk factors, including diabetes, hypercholesterolemia, hypertension, diabetes, and aging, constitute a deleterious macroenvironment that participates to the abrogation of postischemic revascularization and tissue regeneration observed in these patient populations. Thus stimulation of vessel growth and/or remodeling has emerged as a new therapeutic option in patients with ischemic diseases. Many strategies of therapeutic revascularization, based on the administration of growth factors or stem/progenitor cells from diverse sources, have been proposed and are currently tested in patients with peripheral arterial disease or cardiac diseases. This review provides an overview from our current knowledge regarding molecular and cellular mechanisms involved in postischemic revascularization, as well as advances in the clinical application of such strategies of therapeutic revascularization.

Image analysis to measure sorting and stratification applied to sand-gravel experiments

OpenAIRE

Orrú, C.

2016-01-01

The main objective of this project is to develop new measuring techniques for providing detailed data on sediment sorting suitable for sand-gravel laboratory experiments. Such data will be of aid in obtaining new insights on sorting mechanisms and improving prediction capabilities of morphodynamic models. Two measuring techniques have been developed. The first technique is aimed at measuring the size stratification of a sand-gravel deposit through combining image analysis and a sediment remov...

Understanding the Effect of Stratification on Vertical and Temporal Heterogenieties of Cyanobacteria Blooms in Lakes Using a Long Term in-situ Monitoring Station

Science.gov (United States)

Wilkinson, A.; Guala, M.; Hondzo, M.

2017-12-01

Harmful Algal Blooms (HAB) are made up of potentially toxic freshwater microorganisms called cyanobacteria, because of this they are a ecological and public health hazard. The occurrences of toxic HAB are unpredictable and highly spatially and temporary variable in freshwater ecosystems. To study the abiotic drivers for toxic HAB, a floating research station has been deployed in a hyper-eutrophic lake in Madison Lake, Minnesota, from June-October 2016. This research station provides full depth water quality (hourly) and meteorological monitoring (5 minutes). Water quality monitoring is performed by an autonomously traversed water quality sonde that provides chemical, physical and biological measurements; including phycocyanin, a photosynthetic pigment distinct to cyanobacteria. A bloom of cyanobacteria recorded in the epiliminion in mid-July was driven by prolonged strong thermal stratification in the water column, high surface water temperatures and high phosphate concentrations in the epiliminion. The high biovolume (BV) persisted until late September and was sustained below the surface after stratification weakened, when the thermocline did not confine cyanobacteria-rich layers any more, and cyanobacteria vertical heterogeneities decayed in the water column. High correlations among BV stratification, surface water temperature, and stratification stability informed the development of a quantitative relationship to determine how BV heterogeneities vary with thermal structure in the water column. The BV heterogeneity decreased with thermal stratification stability and surface water temperature, and the dynamic lake stability described by the Lake Number. Finally the location of maximum BV accumulation showed diurnal patterns ie. BV peaks were observed at 1 m depth during the day and deeper layers during the night, which followed patterns in light penetration and thermocline depth. These findings capture cyanobacteria vertical and temporal heterogeneities on a on

The stability and stratification of a quantum liquid mixture

International Nuclear Information System (INIS)

Yukalov, V.I.

1980-01-01

A mixture of quantum liquids was investigated microscopically. The spectrum of collective excitations at finite temperature was determined. The form of the spectrum demonstrates whether there is a stability or stratification of the mixture. The influence of a relative motion of liquids on the spectrum was considered. It was demonstrated that beginning with some finite momentun, the spectrum of each component of the solution splits into two branches, one of which continues the spectrum into the single-particle region. The dynamic susceptibility, the dynamic form-factor, the coefficients of compressibility and the structure factor for the mixture of two Bose liquids were obtained. The integral relations that generalize some rules concerning the binary Bose solution was established. (author)

ETHNOPRED: a novel machine learning method for accurate continental and sub-continental ancestry identification and population stratification correction

Science.gov (United States)

2013-01-01

Background Population stratification is a systematic difference in allele frequencies between subpopulations. This can lead to spurious association findings in the case–control genome wide association studies (GWASs) used to identify single nucleotide polymorphisms (SNPs) associated with disease-linked phenotypes. Methods such as self-declared ancestry, ancestry informative markers, genomic control, structured association, and principal component analysis are used to assess and correct population stratification but each has limitations. We provide an alternative technique to address population stratification. Results We propose a novel machine learning method, ETHNOPRED, which uses the genotype and ethnicity data from the HapMap project to learn ensembles of disjoint decision trees, capable of accurately predicting an individual’s continental and sub-continental ancestry. To predict an individual’s continental ancestry, ETHNOPRED produced an ensemble of 3 decision trees involving a total of 10 SNPs, with 10-fold cross validation accuracy of 100% using HapMap II dataset. We extended this model to involve 29 disjoint decision trees over 149 SNPs, and showed that this ensemble has an accuracy of ≥ 99.9%, even if some of those 149 SNP values were missing. On an independent dataset, predominantly of Caucasian origin, our continental classifier showed 96.8% accuracy and improved genomic control’s λ from 1.22 to 1.11. We next used the HapMap III dataset to learn classifiers to distinguish European subpopulations (North-Western vs. Southern), East Asian subpopulations (Chinese vs. Japanese), African subpopulations (Eastern vs. Western), North American subpopulations (European vs. Chinese vs. African vs. Mexican vs. Indian), and Kenyan subpopulations (Luhya vs. Maasai). In these cases, ETHNOPRED produced ensembles of 3, 39, 21, 11, and 25 disjoint decision trees, respectively involving 31, 502, 526, 242 and 271 SNPs, with 10-fold cross validation accuracy of

Multifunctional Nanomaterials Utilizing Hybridization Chain Reaction for Molecular Diagnostics and Bioanalytical Applications

Science.gov (United States)

Rana, Md. Muhit

DNA nanotechnology has shown great promise in molecular diagnostic, bioanalytical and biomedical applications. The great challenge of detecting target analytes, biomarkers and small molecules, in molecular diagnostics is low yield sensitivity. To address this challenge, different nanomaterials have been used for a long time and to date there is no such cost-effective bioanalytical technique which can detect these target biomarkers (DNA, RNA, circulating DNA/miRNA) or environmental heavy metal ions (Hg2+ and Ag+) in a cost-effective and efficient manner. Herein, we initially discuss two possible bioanalytical detection methods- a) colorimetric and b) fluorometric assays which are very popular nowadays due to their distinctive spectroscopic properties. Finally, we report the promising colorimetric assay using a novel DNA based amplification strategy know as hybridization chain reaction (HCR) for potential application in the visual detection of low copies of biomarkers (miRNAs as little as 20 femtomole in an RNA pool and cell extracts in seven different combinations and Ebola virus DNA as low as 400 attomoles in liquid biopsy mimics in sixteen different combinations), environmental and biological heavy metal ions (mercury and silver concentrations as low as 10 pM in water, soil and urine samples) and also successfully applied to a molecular logic gate operation to distinguish OR and AND logic gates. No results showed any false-positive or false-negative information. On the other hand, we also discuss the future possibilities of HCR amplification technology, which is very promising for fluorometric bioanalysis. The HCR based nanoprobe technology has numerous remarkable advantages over other methods. It is re-programmable, simple, inexpensive, easy to assemble and operate and can be performed with visual and spectroscopic read-outs upon recognition of the target analytes. This rapid, specific and sensitive approach for biomarkers and heavy metal ion detection generates

Molecular Combing of DNA: Methods and Applications

DEFF Research Database (Denmark)

Nazari, Zeniab Esmail; Gurevich, Leonid

2013-01-01

studies to nanoelectronics. While molecular combing has been applied in a variety of DNA-related studies, no comprehensive review has been published on different combing methods proposed so far. In this review, the underlying mechanisms of molecular combing of DNA are described followed by discussion...

Thermal stratifications. An industrial point of view

International Nuclear Information System (INIS)

Peniguel, C.

1995-11-01

In PWR's, mechanical damages (cracks) have been detected at the internal faces of steam generator feedwater piping when thermal stratification occurs. This paper reports some studies of flows under operating conditions leading to of a stable stratified flow. Two geometries corresponding to different mock-up studied at EDF and CEA have been investigated. Numerical simulations have been performed with the code ESTET. Good agreement is observed on the mean temperature but it seems that the present modelling of the temperature variance fails to reproduce correctly the fluctuating phenomena It appears that with a stably stratified flow, wall conduction should be taken into account. It lead us to create a new numerical tool (SYRTHES) to compute the thermal field inside the wall, and the thermal coupling between the fluid and the solid at the interface. Some industrial examples illustrating the use of such a numerical tool are briefly presented. (author). 12 refs., 13 figs

Molecular Theory of the Living Cell Concepts, Molecular Mechanisms, and Biomedical Applications

CERN Document Server

Ji, Sungchul

2012-01-01

This book presents a comprehensive molecular theory of the living cell based on over thirty concepts, principles and laws imported from thermodynamics, statistical mechanics, quantum mechanics, chemical kinetics, informatics, computer science, linguistics, semiotics, and philosophy. The author formulates physically, chemically and enzymologically realistic molecular mechanisms to account for the basic living processes such as ligand-receptor interactions, protein folding, single-molecule enzymic catalysis, force-generating mechanisms in molecular motors, signal transduction, regulation of the genome-wide RNA metabolism, morphogenesis, the micro-macro coupling in coordination dynamics, the origin of life, and the mechanisms of biological evolution itself. Possible solutions to basic and practical problems facing contemporary biology and biomedical sciences have been suggested, including pharmacotheragnostics and personalized medicine.

Metal-Based Systems for Molecular Imaging Applications - COST D38 Annual Workshop - Scientific Program and Abstracts

International Nuclear Information System (INIS)

Mikolajczak, R.

2009-01-01

The main objective of the Action is the development of metal-based imaging probes for cellular and molecular imaging applications, based on MRI, PET, SPECT and optical imaging that will facilitate early diagnosis, assessment of disease progression and treatment evaluation.The goal of this Action is to further the development of innovative imaging probes through the pursuit of innovations in a number of different areas, ranging from the design of imaging units endowed with enhanced sensitivity to the control of the structural and electronic determinants responsible for the molecular recognition of the target molecule.At present, in vivo diagnostic systems basically assess the structure and function of human organs. Therefore, for important diseases such as cancer and cardiovascular pathologies,and also diseases of the central nervous system, only the late symptoms are detected. It is expected that the advances in genomics and proteomics will have a tremendous impact on human health care of the future. However, advances in molecular biology are already redefining diseases in terms of molecular abnormalities. With this knowledge, new generations of diagnostic imaging agents can be defined that aim at the detection of those molecular processes in vivo.The molecular imaging approach offers a great potential for earlier detection and characterisation of disease, and evaluation of treatment. However, more research is necessary to bring these ideas to clinical applications and a key aspect relates to the development of high-specificity, high-sensitivity imaging probes for the different detection modalities. Additionally, the Action includes research activities dealing with the exploitation of peculiar nuclear properties of given isotopes for therapeutic effects, thus integrating the diagnostic and the therapeutic stages.Apart from its use in early diagnosis in clinical practice, the molecular imaging approach will have also a major impact on the development of new

Magnetic polyoxometalates: from molecular magnetism to molecular spintronics and quantum computing.

Science.gov (United States)

Clemente-Juan, Juan M; Coronado, Eugenio; Gaita-Ariño, Alejandro

2012-11-21

In this review we discuss the relevance of polyoxometalate (POM) chemistry to provide model objects in molecular magnetism. We present several potential applications in nanomagnetism, in particular, in molecular spintronics and quantum computing.

Evaluation charts of thermal stresses in cylindrical vessels induced by thermal stratification of contained fluid

International Nuclear Information System (INIS)

Furuhashi, Ichiro; Kawasaki, Nobuchika; Kasahara, Naoto

2008-01-01

Temperature and thermal stress in cylindrical vessels were analysed for the thermal stratification of contained fluid. Two kinds of temperature analysis results were obtained such as the exact temperature solution of eigenfunction series and the simple approximate one by the temperature profile method. Furthermore, thermal stress shell solutions were obtained for the simple approximate temperatures. Through comparison with FEM analyses, these solutions were proved to be adequate. The simple temperature solution is described by one parameter that is the temperature decay coefficient. The thermal stress shell solutions are described by two parameters. One is the ratio between the temperature decay coefficient and the load decay coefficient. Another is the nondimensional width of stratification. These solutions are so described by few parameters that those are suitable for the simplified thermal stress evaluation charts. These charts enable quick and accurate thermal stress evaluations of cylindrical vessel of this problem compared with conventional methods. (author)

Evaluation charts of thermal stresses in cylindrical vessels induced by thermal stratification of contained fluid

International Nuclear Information System (INIS)

Furuhashi, Ichiro; Kawasaki, Nobuchika; Kasahara, Naoto

2007-01-01

Temperature and thermal stress in cylindrical vessels were analysed for the thermal stratification of contained fluid. Two kinds of temperature analysis results were obtained such as the exact temperature solution of eigen-function series and the simple approximate one by the temperature profile method. Furthermore, shell solutions of thermal stress were obtained for the simple approximate temperatures. Through comparison with FEM analyses, these solutions were proved to be adequate. The simple temperature solution is described by one parameter that is the temperature decay factor. The shell solutions of thermal stress are described by two parameters. One is the ratio between the temperature decay factor and the local decay factor. Another is the non-dimensional width of stratification. These solution are so described by few parameters that those are suitable for the simplified thermal stress evaluation charts. These charts enable quick and accurate thermal stress evaluations of cylindrical vessel of this problem compared with conventional methods. (author)

Thermal and solutal stratification in mixed convection three-dimensional flow of an Oldroyd-B nanofluid

Directory of Open Access Journals (Sweden)

Tasawar Hayat

Full Text Available This paper investigates the double stratified effects in mixed convection three-dimensional flow of an Oldroyd-B nanofluid. The flow is due to a bidirectional stretching surface. Mathematical analysis is carried out using the temperature and concentration stratification effects. Brownian motion, thermophoresis and chemical reaction effects are also considered. The governing nonlinear boundary layer equations are first converted into the dimensionless ordinary differential equations and then solved for the convergent series solutions of velocity, temperature and nanoparticles concentration. Convergence analysis of the obtained series solutions is also checked and verified. Effects of various emerging parameters are studied in details. Numerical values of local Nusselt and Sherwood numbers are tabulated and analyzed. It is noticed that the impact of mixed convection parameter on temperature and nanoparticles concentration is quite similar. Both temperature and nanoparticles concentration are reduced for larger mixed convection parameter. Keywords: Three-dimensional flow, Oldroyd-B fluid, Nanoparticles, Mixed convection, Thermal and solutal stratification, Chemically reactive species

Evolving molecular era of childhood medulloblastoma: time to revisit therapy.

Science.gov (United States)

Khatua, Soumen

2016-01-01

Currently medulloblastoma is treated with a uniform therapeutic approach based on histopathology and clinico-radiological risk stratification, resulting in unpredictable treatment failure and relapses. Improved understanding of the biological, molecular and genetic make-up of these tumors now clearly identifies it as a compendium of four distinct subtypes (WNT, SHH, group 3 and 4). Advances in utilization of the genomic and epigenomic machinery have now delineated genetic aberrations and epigenetic perturbations in each subgroup as potential druggable targets. This has resulted in endeavors to profile targeted therapy. The challenge and future of medulloblastoma therapeutics will be to keep pace with the evolving novel biological insights and translating them into optimal targeted treatment regimens.

Transient stratification modelling of a corium pool in a LWR vessel lower head

International Nuclear Information System (INIS)

Le Tellier, R.; Saas, L.; Bajard, S.

2015-01-01

Highlights: • A kinetic stratification model is proposed for the simulation of the in-vessel corium behaviour during a LWR severe accident. • The different associated “modes” of vessel failure by thermal focusing effect are highlighted and discussed. • A sensitivity study for a 1650 MWe GenIII PWR is presented with this model in order to illustrate the associated R&D issues. - Abstract: In the context of light water reactor severe accidents analysis, this paper is focused on one key parameter of in-vessel corium phenomenology: the immiscible phases stratification and its impact on the heat flux distribution at the corium pool lateral boundary with the so-called focusing effect related to a “thin” top metal phase and the potential vessel failure at that point. More particularly, based on the limited knowledge of the stratification transient phenomenon derived from the MASCA-RCW experiment, a basic model is proposed that can be used for corium in lower head sensitivity analyses. It has been implemented in the PROCOR platform developed at CEA Cadarache. A short parametric study on a simple hypothetical transient is presented in order to highlight the different focusing effect “modes” that can be encountered based on this in-vessel corium pool model. An early mode may occur during the formation of the top metal layer while two other modes may appear later during the thinning of this top metal layer because of thermochemically induced mass transfers. Some associated relevant parameters (model or scenario-dependent) and modelling issues are mentioned and illustrated with some results of a Monte-Carlo based sensitivity calculation on the transient behaviour of the corium in the lower head of a 1650 MWe GenIII PWR. Within the limiting modelling hypotheses, the thermal modelling of the steel layer for small (centimetre) heights and the mass diffusivity (limited in this case to the uranium diffusivity in the oxidic layer) are main sensitive parameters

Influence of precipitating light elements on stable stratification below the core/mantle boundary

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O'Rourke, J. G.; Stevenson, D. J.

2017-12-01

Stable stratification below the core/mantle boundary is often invoked to explain anomalously low seismic velocities in this region. Diffusion of light elements like oxygen or, more slowly, silicon could create a stabilizing chemical gradient in the outermost core. Heat flow less than that conducted along the adiabatic gradient may also produce thermal stratification. However, reconciling either origin with the apparent longevity (>3.45 billion years) of Earth's magnetic field remains difficult. Sub-isentropic heat flow would not drive a dynamo by thermal convection before the nucleation of the inner core, which likely occurred less than one billion years ago and did not instantly change the heat flow. Moreover, an oxygen-enriched layer below the core/mantle boundary—the source of thermal buoyancy—could establish double-diffusive convection where motion in the bulk fluid is suppressed below a slowly advancing interface. Here we present new models that explain both stable stratification and a long-lived dynamo by considering ongoing precipitation of magnesium oxide and/or silicon dioxide from the core. Lithophile elements may partition into iron alloys under extreme pressure and temperature during Earth's formation, especially after giant impacts. Modest core/mantle heat flow then drives compositional convection—regardless of thermal conductivity—since their solubility is strongly temperature-dependent. Our models begin with bulk abundances for the mantle and core determined by the redox conditions during accretion. We then track equilibration between the core and a primordial basal magma ocean followed by downward diffusion of light elements. Precipitation begins at a depth that is most sensitive to temperature and oxygen abundance and then creates feedbacks with the radial thermal and chemical profiles. Successful models feature a stable layer with low seismic velocity (which mandates multi-component evolution since a single light element typically

Mathematical and physical modeling of thermal stratification phenomena in steel ladles

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Putan, V.; Vilceanu, L.; Socalici, A.; Putan, A.

2018-01-01

By means of CFD numerical modeling, a systematic analysis of the similarity between steel ladles and hot-water model regarding natural convection phenomena was studied. The key similarity criteria we found to be dependent on the dimensionless numbers Fr and βΔT. These similarity criteria suggested that hot-water models with scale in the range between 1/5 and 1/3 and using hot water with temperature of 45 °C or higher are appropriate for simulating natural convection in steel ladles. With this physical model, thermal stratification phenomena due to natural convection in steel ladles were investigated. By controlling the cooling intensity of water model to correspond to the heat loss rate of steel ladles, which is governed by Fr and βΔT, the temperature profiles measured in the water bath of the model were to deduce the extent of thermal stratification in liquid steel bath in the ladles. Comparisons between mathematically simulated temperature profiles in the prototype steel ladles and those physically simulated by scaling-up the measured temperatures profiles in the water model showed good agreement. This proved that it is feasible to use a 1/5 scale water model with 45 °C hot water to simulate natural convection in steel ladles. Therefore, besides mathematical CFD models, the physical hot-water model provided an additional means of studying fluid flow and heat transfer in steel ladles.

Ab initio molecular dynamics: basic concepts, current trends and novel applications

International Nuclear Information System (INIS)

Tuckerman, Mark E

2002-01-01

The field of ab initio molecular dynamics (AIMD), in which finite temperature molecular dynamics (MD) trajectories are generated with forces obtained from accurate 'on the fly' electronic structure calculations, is a rapidly evolving and growing technology that allows chemical processes in condensed phases to be studied in an accurate and unbiased way. This article is intended to present the basics of the AIMD method as well as to provide a broad survey of the state of the art of the field and showcase some of its capabilities. Beginning with a derivation of the method from the Born-Oppenheimer approximation, issues including the density functional representation of electronic structure, basis sets, calculation of observables and the Car-Parrinello extended Lagrangian algorithm are discussed. A number of example applications, including liquid structure and dynamics and aqueous proton transport, are presented in order to highlight some of the current capabilities of the approach. Finally, advanced topics such as inclusion of nuclear quantum effects, excited states and scaling issues are addressed. (topical review)

One-dimensional simulation of stratification and dissolved oxygen in McCook Reservoir, Illinois

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Robertson, Dale M.

2000-01-01

As part of the Chicagoland Underflow Plan/Tunnel and Reservoir Plan, the U.S. Army Corps of Engineers, Chicago District, plans to build McCook Reservoir.a flood-control reservoir to store combined stormwater and raw sewage (combined sewage). To prevent the combined sewage in the reservoir from becoming anoxic and producing hydrogen sulfide gas, a coarse-bubble aeration system will be designed and installed on the basis of results from CUP 0-D, a zero-dimensional model, and MAC3D, a three-dimensional model. Two inherent assumptions in the application of MAC3D are that density stratification in the simulated water body is minimal or not present and that surface heat transfers are unimportant and, therefore, may be neglected. To test these assumptions, the previously tested, one-dimensional Dynamic Lake Model (DLM) was used to simulate changes in temperature and dissolved oxygen in the reservoir after a 1-in-100-year event. Results from model simulations indicate that the assumptions made in MAC3D application are valid as long as the aeration system, with an air-flow rate of 1.2 cubic meters per second or more, is operated while the combined sewage is stored in the reservoir. Results also indicate that the high biochemical oxygen demand of the combined sewage will quickly consume the dissolved oxygen stored in the reservoir and the dissolved oxygen transferred through the surface of the reservoir; therefore, oxygen must be supplied by either the rising bubbles of the aeration system (a process not incorporated in DLM) or some other technique to prevent anoxia.

Effect of optimum stratification on sampling with varying probabilities under proportional allocation

OpenAIRE

Syed Ejaz Husain Rizvi; Jaj P. Gupta; Manoj Bhargava

2007-01-01

The problem of optimum stratification on an auxiliary variable when the units from different strata are selected with probability proportional to the value of auxiliary variable (PPSWR) was considered by Singh (1975) for univariate case. In this paper we have extended the same problem, for proportional allocation, when two variates are under study. A cum. 3 R3(x) rule for obtaining approximately optimum strata boundaries has been provided. It has been shown theoretically as well as empiricall...

Stratification in the lunar regolith - a preliminary view

International Nuclear Information System (INIS)

Duke, M.B.; Nagle, J.S.

1975-01-01

Although the knowledge of lunar regolith stratification is incomplete, several categories of thick and thin strata have been identified. Relatively thick units average 2 to 3 cm in thickness, and appear surficially to be massive. On more detailed examination, these units can be uniformly fine-grained, can show internal trends, or can show internal variations which apparently are random. Other thick units contain soil clasts apparently reworked from underlying units. Thin laminae average approximately 1 mm in thickness; lenticular distribution and composition of some thin laminae indicates they are fillets shed from adjacent rock fragments. Other dark, fine-grained, well-sorted thin laminae appear to be surficial zones, reworked by micrometeorites. Interpretations of stratigraphic succession can be strengthened by the occurrence of characteristic coarse rock fragments and the orientation of large spatter agglutinates, which are commonly found in their original depositional orientation. (Auth.)

T-junction cross-flow mixing with thermally driven density stratification

Energy Technology Data Exchange (ETDEWEB)

Kickhofel, John, E-mail: jkickhofel@gmail.com [Laboratory of Nuclear Energy Systems, ETH Zurich, Sonneggstrasse 3, 8057 Zurich (Switzerland); Prasser, Horst-Michael, E-mail: prasser@lke.mavt.ethz.ch [Laboratory of Nuclear Energy Systems, ETH Zurich, Sonneggstrasse 3, 8057 Zurich (Switzerland); Selvam, P. Karthick, E-mail: karthick.selvam@ike.uni-stuttgart.de [Institute of Nuclear Technology and Energy Systems (IKE), University of Stuttgart, Pfaffenwaldring 31, 70569 Stuttgart (Germany); Laurien, Eckart, E-mail: eckart.laurien@ike.uni-stuttgart.de [Institute of Nuclear Technology and Energy Systems (IKE), University of Stuttgart, Pfaffenwaldring 31, 70569 Stuttgart (Germany); Kulenovic, Rudi, E-mail: rudi.kulenovic@ike.uni-stuttgart.de [Institute of Nuclear Technology and Energy Systems (IKE), University of Stuttgart, Pfaffenwaldring 31, 70569 Stuttgart (Germany)

2016-12-01

Highlights: • Mesh sensor for realistic nuclear thermal hydraulic scenarios is demonstrated. • Flow temperature behavior across a wide range of Richardson numbers measured. • Upstream stratified flow in the T-junction results in a thermal shock scenario. • Large, stable near-wall thermal gradients exist in spite of turbulent flows. - Abstract: As a means of further elucidating turbulence- and stratification-driven thermal fatigue in the vicinity of T-junctions in nuclear power plants, a series of experiments have been conducted at the high temperature high pressure fluid–structure interaction T-junction facility of the University of Stuttgart with novel fluid measurement instrumentation. T-junction mixing with large fluid temperature gradients results in complex flow behavior, the result of density driven effects. Deionized water mixing at temperature differences of up to 232 K at 7 MPa pressure have been investigated in a T-junction with main pipe diameter 71.8 mm and branch line diameter 38.9 mm. The experiments have been performed with fixed flow rates of 0.4 kg/s in the main pipe and 0.1 kg/s in the branch line. A novel electrode-mesh sensor compatible with the DN80 PN100 pipeline upstream and downstream of the T-junction has been utilized as a temperature sensor providing a high density information in the pipe cross-section in both space and time. Additionally, in-flow and in-wall thermocouples quantify the damping of thermal fluctuations by the wall material. The results indicate that large inflow temperature differences lead to strong turbulence damping, and ultimately stable stratification extending both downstream and upstream of the T-junction resulting in large local thermal gradients.

Atomic and Molecular Data and their Applications★

Science.gov (United States)

Drake, Gordon W. F.; Yoon, Jung-Sik; Kato, Daiji; Karwasz, Grzegorz

2018-03-01

This topical issue on Atomic and molecular data and their applications was motivated by the 10th International Conference on Atomic and Molecular Data (ICAMDATA 2016), which was held from September 26 to 29, 2016 in Gunsan, Republic of Korea. The topics of this issue reflect those of the conference program. The scientific papers in the topical issue cover the fields of atomic and molecular structure, radiative transitions, scattering processes, data base development, and the applications of atomic and molecular data to plasma modeling. Contribution to the Topical Issue "Atomic and Molecular Data and their Applications", edited by Gordon W.F. Drake, Jung-Sik Yoon, Daiji Kato, and Grzegorz Karwasz.

TIMSS 2011 User Guide for the International Database. Supplement 4: TIMSS 2011 Sampling Stratification Information

Science.gov (United States)

Foy, Pierre, Ed.; Arora, Alka, Ed.; Stanco, Gabrielle M., Ed.

2013-01-01

This supplement contains documentation on the explicit and implicit stratification variables included in the TIMSS 2011 data files. The explicit strata are smaller sampling frames, created from the national sampling frames, from which national samples of schools were drawn. The implicit strata are nested within the explicit strata, and were used…

A risk stratification model for antihypertensive medication non-adherence among Chinese immigrants

Directory of Open Access Journals (Sweden)

Wen-Wen Li

2016-12-01

Full Text Available The purpose of this study was to establish a risk stratification model for identifying Chinese immigrants at risk for non-adherence to antihypertensive medications. Questionnaires were self-administered to 200 Chinese immigrants in San Francisco, USA. Questionnaires included demographics, culture factors (e.g., Perceived Susceptibility in General, Perceived Benefits of Western Medication, Perceived Benefits of Chinese Herbs, and Health-Related Social Support, and medications adherence. Participants' mean age was 70.6 (±10.3 years. Three stratification factors were identified for non-adherence: Lower Perceived Susceptibility in General, lower Perceived Benefit of Western Medications, and longer Length of Stay in the United States. The probability of non-adherence was 77%, 62%, and 57% for lower perceived susceptibility, longer stay in the United States, and lower perceived benefits of Western medications, respectively. A combination of lower perceived susceptibility and lower perceived benefits of medication predicted 81% non-adherence and lower perceived susceptibility with longer stay in the United States predicted at 84%. All three factors combined predicted nearly 90%. Patients with all three factors had the highest risk for non-adherence. The second priority groups are patients with lower perceived susceptibility and those with lower perceived susceptibility combined with any of the other two factors. In the clinical setting, these three groups are a high priority for education on the importance of medication adherence.