WorldWideScience

Sample records for model version includes

  1. The COG database: an updated version includes eukaryotes

    Directory of Open Access Journals (Sweden)

    Sverdlov Alexander V

    2003-09-01

    Full Text Available Abstract Background The availability of multiple, essentially complete genome sequences of prokaryotes and eukaryotes spurred both the demand and the opportunity for the construction of an evolutionary classification of genes from these genomes. Such a classification system based on orthologous relationships between genes appears to be a natural framework for comparative genomics and should facilitate both functional annotation of genomes and large-scale evolutionary studies. Results We describe here a major update of the previously developed system for delineation of Clusters of Orthologous Groups of proteins (COGs from the sequenced genomes of prokaryotes and unicellular eukaryotes and the construction of clusters of predicted orthologs for 7 eukaryotic genomes, which we named KOGs after eukaryotic orthologous groups. The COG collection currently consists of 138,458 proteins, which form 4873 COGs and comprise 75% of the 185,505 (predicted proteins encoded in 66 genomes of unicellular organisms. The eukaryotic orthologous groups (KOGs include proteins from 7 eukaryotic genomes: three animals (the nematode Caenorhabditis elegans, the fruit fly Drosophila melanogaster and Homo sapiens, one plant, Arabidopsis thaliana, two fungi (Saccharomyces cerevisiae and Schizosaccharomyces pombe, and the intracellular microsporidian parasite Encephalitozoon cuniculi. The current KOG set consists of 4852 clusters of orthologs, which include 59,838 proteins, or ~54% of the analyzed eukaryotic 110,655 gene products. Compared to the coverage of the prokaryotic genomes with COGs, a considerably smaller fraction of eukaryotic genes could be included into the KOGs; addition of new eukaryotic genomes is expected to result in substantial increase in the coverage of eukaryotic genomes with KOGs. Examination of the phyletic patterns of KOGs reveals a conserved core represented in all analyzed species and consisting of ~20% of the KOG set. This conserved portion of the

  2. Industrial Waste Management Evaluation Model Version 3.1

    Science.gov (United States)

    IWEM is a screening level ground water model designed to simulate contaminant fate and transport. IWEM v3.1 is the latest version of the IWEM software, which includes additional tools to evaluate the beneficial use of industrial materials

  3. Forsmark - site descriptive model version 0

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2002-10-01

    area identified in the feasibility study as favourable for further study. This rectangular area has now been designated the Forsmark regional model area. An important component of the present work is a data inventory, in which the location and scope of all potential sources of data is detailed and evaluated with respect to prospective usefulness for future site descriptive modelling for deep disposal. Data sources relevant to the Forsmark regional model area which still, to some degree, need to be evaluated/converted/inserted include the siting and construction of the three nuclear reactors (Forsmark 1-3), the feasibility study for an underground spent nuclear fuel interim storage facility at Forsmark, the pre-investigations and construction of the SFR, and the SAFE project. The present report describes the current level of knowledge of the surface ecosystems in the Forsmark regional model area, in a highly condensed form. It refers to, and draws its examples from, a series of SKB background reports which have been produced since the completion of the Oesthammar feasibility study, and a number of other sources of information which are gathered here for the first time. The data sources are outlined with reference to a series of functional ecosystem types: drainage areas, forest, wetland, agricultural land, lakes and rivers, and sea, each further subdivided into appropriate entities. A systematic approach has been used, even though, at the current level of knowledge, the information in many subdivisions is inadequate or lacking. The aims of biosphere studies within the site investigation programme are to define baseline (preconstruction) conditions, to provide the necessary data base for the environmental impact statement, and to contribute to the dose estimations in the safety analysis. The main emphasis of the report is on the preparation of a site descriptive model, version 0, for the geosphere, since data acquisition and processing in this area, in contrast to the

  4. Simpevarp - site descriptive model version 0

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2002-11-01

    During 2002, SKB is starting detailed investigations at two potential sites for a deep repository in the Precambrian rocks of the Fennoscandian Shield. The present report concerns one of those sites, Simpevarp, which lies in the municipality of Oskarshamn, on the southeast coast of Sweden, about 250 kilometres south of Stockholm. The site description will have two main components: a written synthesis of the site, summarising the current state of knowledge, as documented in the databases containing the primary data from the site investigations, and one or several site descriptive models, in which the collected information is interpreted and presented in a form which can be used in numerical models for rock engineering, environmental impact and long-term safety assessments. SKB maintains two main databases at the present time, a site characterisation database called SICADA and a geographic information system called SKB GIS. The site descriptive model will be developed and presented with the aid of the SKB GIS capabilities, and with SKBs Rock Visualisation System (RVS), which is also linked to SICADA. The version 0 model forms an important framework for subsequent model versions, which are developed successively, as new information from the site investigations becomes available. Version 0 is developed out of the information available at the start of the site investigation. In the case of Simpevarp, this is essentially the information which was compiled for the Oskarshamn feasibility study, which led to the choice of that area as a favourable object for further study, together with information collected since its completion. This information, with the exception of the extensive data base from the nearby Aespoe Hard Rock Laboratory, is mainly 2D in nature (surface data), and is general and regional, rather than site-specific, in content. Against this background, the present report consists of the following components: an overview of the present content of the databases

  5. Including Magnetostriction in Micromagnetic Models

    Science.gov (United States)

    Conbhuí, Pádraig Ó.; Williams, Wyn; Fabian, Karl; Nagy, Lesleis

    2016-04-01

    The magnetic anomalies that identify crustal spreading are predominantly recorded by basalts formed at the mid-ocean ridges, whose magnetic signals are dominated by iron-titanium-oxides (Fe3-xTixO4), so called "titanomagnetites", of which the Fe2.4Ti0.6O4 (TM60) phase is the most common. With sufficient quantities of titanium present, these minerals exhibit strong magnetostriction. To date, models of these grains in the pseudo-single domain (PSD) range have failed to accurately account for this effect. In particular, a popular analytic treatment provided by Kittel (1949) for describing the magnetostrictive energy as an effective increase of the anisotropy constant can produce unphysical strains for non-uniform magnetizations. I will present a rigorous approach based on work by Brown (1966) and by Kroner (1958) for including magnetostriction in micromagnetic codes which is suitable for modelling hysteresis loops and finding remanent states in the PSD regime. Preliminary results suggest the more rigorously defined micromagnetic models exhibit higher coercivities and extended single domain ranges when compared to more simplistic approaches.

  6. International Spinal Cord Injury Core Data Set (version 2.0)-including standardization of reporting

    NARCIS (Netherlands)

    Biering-Sorensen, F.; DeVivo, M. J.; Charlifue, S.; Chen, Y.; New, P. W.; Noonan, V.; Post, M. W. M.; Vogel, L.

    2017-01-01

    Study design: The study design includes expert opinion, feedback, revisions and final consensus. Objectives: The objective of the study was to present the new knowledge obtained since the International Spinal Cord Injury (SCI) Core Data Set (Version 1.0) published in 2006, and describe the adjustmen

  7. Forsmark - site descriptive model version 0

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2002-10-01

    area identified in the feasibility study as favourable for further study. This rectangular area has now been designated the Forsmark regional model area. An important component of the present work is a data inventory, in which the location and scope of all potential sources of data is detailed and evaluated with respect to prospective usefulness for future site descriptive modelling for deep disposal. Data sources relevant to the Forsmark regional model area which still, to some degree, need to be evaluated/converted/inserted include the siting and construction of the three nuclear reactors (Forsmark 1-3), the feasibility study for an underground spent nuclear fuel interim storage facility at Forsmark, the pre-investigations and construction of the SFR, and the SAFE project. The present report describes the current level of knowledge of the surface ecosystems in the Forsmark regional model area, in a highly condensed form. It refers to, and draws its examples from, a series of SKB background reports which have been produced since the completion of the Oesthammar feasibility study, and a number of other sources of information which are gathered here for the first time. The data sources are outlined with reference to a series of functional ecosystem types: drainage areas, forest, wetland, agricultural land, lakes and rivers, and sea, each further subdivided into appropriate entities. A systematic approach has been used, even though, at the current level of knowledge, the information in many subdivisions is inadequate or lacking. The aims of biosphere studies within the site investigation programme are to define baseline (preconstruction) conditions, to provide the necessary data base for the environmental impact statement, and to contribute to the dose estimations in the safety analysis. The main emphasis of the report is on the preparation of a site descriptive model, version 0, for the geosphere, since data acquisition and processing in this area, in contrast to the

  8. Simpevarp - site descriptive model version 0

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2002-11-01

    During 2002, SKB is starting detailed investigations at two potential sites for a deep repository in the Precambrian rocks of the Fennoscandian Shield. The present report concerns one of those sites, Simpevarp, which lies in the municipality of Oskarshamn, on the southeast coast of Sweden, about 250 kilometres south of Stockholm. The site description will have two main components: a written synthesis of the site, summarising the current state of knowledge, as documented in the databases containing the primary data from the site investigations, and one or several site descriptive models, in which the collected information is interpreted and presented in a form which can be used in numerical models for rock engineering, environmental impact and long-term safety assessments. SKB maintains two main databases at the present time, a site characterisation database called SICADA and a geographic information system called SKB GIS. The site descriptive model will be developed and presented with the aid of the SKB GIS capabilities, and with SKBs Rock Visualisation System (RVS), which is also linked to SICADA. The version 0 model forms an important framework for subsequent model versions, which are developed successively, as new information from the site investigations becomes available. Version 0 is developed out of the information available at the start of the site investigation. In the case of Simpevarp, this is essentially the information which was compiled for the Oskarshamn feasibility study, which led to the choice of that area as a favourable object for further study, together with information collected since its completion. This information, with the exception of the extensive data base from the nearby Aespoe Hard Rock Laboratory, is mainly 2D in nature (surface data), and is general and regional, rather than site-specific, in content. Against this background, the present report consists of the following components: an overview of the present content of the databases

  9. Performance Tests of Snow-Related Variables Over the Tibetan Plateau and Himalayas Using a New Version of NASA GEOS-5 Land Surface Model that Includes the Snow Darkening Effect

    Science.gov (United States)

    Yasunari, Tppei J.; Lau, K.-U.; Koster, Randal D.; Suarez, Max; Mahanama, Sarith; Dasilva, Arlindo M.; Colarco, Peter R.

    2011-01-01

    The snow darkening effect, i.e. the reduction of snow albedo, is caused by absorption of solar radiation by absorbing aerosols (dust, black carbon, and organic carbon) deposited on the snow surface. This process is probably important over Himalayan and Tibetan glaciers due to the transport of highly polluted Atmospheric Brown Cloud (ABC) from the Indo-Gangetic Plain (IGP). This effect has been incorporated into the NASA Goddard Earth Observing System model, version 5 (GEOS-5) atmospheric transport model. The Catchment land surface model (LSM) used in GEOS-5 considers 3 snow layers. Code was developed to track the mass concentration of aerosols in the three layers, taking into account such processes as the flushing of the compounds as liquid water percolates through the snowpack. In GEOS-5, aerosol emissions, transports, and depositions are well simulated in the Goddard Chemistry Aerosol Radiation and Transport (GO CART) module; we recently made the connection between GOCART and the GEOS-5 system fitted with the revised LSM. Preliminary simulations were performed with this new system in "replay" mode (i.e., with atmospheric dynamics guided by reanalysis) at 2x2.5 degree horizontal resolution, covering the period 1 November 2005 - 31 December 2009; we consider the final three years of simulation here. The three simulations used the following variants of the LSM: (1) the original Catchment LSM with a fixed fresh snowfall density of 150 kg m-3 ; (2) the LSM fitted with the new snow albedo code, used here without aerosol deposition but with changes in density formulation and melting water effect on snow specific surface area, (3) the LSM fitted with the new snow albedo code as same as (2) but with fixed aerosol deposition rates (computed from GOCART values averaged over the Tibetan Plateau domain [Ion.: 60-120E; lat.: 20-50N] during March-May 2008) applied to all grid points at every time step. For (2) and (3), the same setting on the fresh snowfall density as in (1

  10. International Spinal Cord Injury Core Data Set (version 2.0)-including standardization of reporting.

    Science.gov (United States)

    Biering-Sørensen, F; DeVivo, M J; Charlifue, S; Chen, Y; New, P W; Noonan, V; Post, M W M; Vogel, L

    2017-08-01

    The study design includes expert opinion, feedback, revisions and final consensus. The objective of the study was to present the new knowledge obtained since the International Spinal Cord Injury (SCI) Core Data Set (Version 1.0) published in 2006, and describe the adjustments made in Version 2.0, including standardization of data reporting. International. Comments received from the SCI community were discussed in a working group (WG); suggestions from the WG were reviewed and revisions were made. All suggested revisions were considered, and a final version was circulated for final approval. The International SCI Core Data Set (Version 2.0) consists of 25 variables. Changes made to this version include the deletion of one variable 'Total Days Hospitalized' and addition of two variables 'Date of Rehabilitation Admission' and 'Date of Death.' The variable 'Injury Etiology' was extended with six non-traumatic categories, and corresponding 'Date of Injury' for non-traumatic cases, was defined as the date of first physician visit for symptoms related to spinal cord dysfunction. A category reflecting transgender was added. A response category was added to the variable on utilization of ventilatory assistance to document the use of continuous positive airway pressure for sleep apnea. Other clarifications were made to the text. The reporting of the pediatric SCI population was updated as age groups 0-5, 6-12, 13-14, 15-17 and 18-21. Collection of the core data set should be a basic requirement of all studies of SCI to facilitate accurate descriptions of patient populations and comparison of results across published studies from around the world.

  11. Equivalency of Spanish language versions of the trail making test part B including or excluding "CH".

    Science.gov (United States)

    Cherner, Mariana; Suarez, Paola; Posada, Carolina; Fortuny, Lidia Artiola I; Marcotte, Thomas; Grant, Igor; Heaton, Robert

    2008-07-01

    Spanish speakers commonly use two versions of the alphabet, one that includes the sound "Ch" between C and D and another that goes directly to D, as in English. Versions of the Trail Making Test Part B (TMT-B) have been created accordingly to accommodate this preference. The pattern and total number of circles to be connected are identical between versions. However, the equivalency of these alternate forms has not been reported. We compared the performance of 35 healthy Spanish speakers who completed the "Ch" form (CH group) to that of 96 individuals who received the standard form (D group), based on whether they mentioned "Ch" in their oral recitation of the alphabet. The groups had comparable demographic characteristics and overall neuropsychological performance. There were no significant differences in TMT-B scores between the CH and D groups, and relationships with demographic variables were comparable. The findings suggest that both versions are equivalent and can be administered to Spanish speakers based on their preference without sacrificing comparability.

  12. A Functional Version of the ARCH Model

    CERN Document Server

    Hormann, Siegfried; Reeder, Ron

    2011-01-01

    Improvements in data acquisition and processing techniques have lead to an almost continuous flow of information for financial data. High resolution tick data are available and can be quite conveniently described by a continuous time process. It is therefore natural to ask for possible extensions of financial time series models to a functional setup. In this paper we propose a functional version of the popular ARCH model. We will establish conditions for the existence of a strictly stationary solution, derive weak dependence and moment conditions, show consistency of the estimators and perform a small empirical study demonstrating how our model matches with real data.

  13. A version management model of PDM system and its realization

    Institute of Scientific and Technical Information of China (English)

    ZHONG Shi-sheng; LI Tao

    2008-01-01

    Based on the key function of version management in PDM system, this paper discusses the function and the realization of version management and the transitions of version states with a workflow. A directed acy-clic graph is used to describe a version model. Three storage modes of the directed acyclic graph version model in the database, the bumping block and the PDM working memory are presented and the conversion principle of these three modes is given. The study indicates that building a dynamic product structure configuration model based on versions is the key to resolve the problem. Thus a version model of single product object is built. Then the version management model in product structure configuration is built and the apphcation of version manage-ment of PDM syste' is presented as a case.

  14. ONKALO rock mechanics model (RMM). Version 2.3

    Energy Technology Data Exchange (ETDEWEB)

    Haekkinen, T.; Merjama, S.; Moenkkoenen, H. [WSP Finland, Helsinki (Finland)

    2014-07-15

    The Rock Mechanics Model of the ONKALO rock volume includes the most important rock mechanics features and parameters at the Olkiluoto site. The main objective of the model is to be a tool to predict rock properties, rock quality and hence provide an estimate for the rock stability of the potential repository at Olkiluoto. The model includes a database of rock mechanics raw data and a block model in which the rock mechanics parameters are estimated through block volumes based on spatial rock mechanics raw data. In this version 2.3, special emphasis was placed on refining the estimation of the block model. The model was divided into rock mechanics domains which were used as constraints during the block model estimation. During the modelling process, a display profile and toolbar were developed for the GEOVIA Surpac software to improve visualisation and access to the rock mechanics data for the Olkiluoto area. (orig.)

  15. METAPHOR (version 1): Users guide. [performability modeling

    Science.gov (United States)

    Furchtgott, D. G.

    1979-01-01

    General information concerning METAPHOR, an interactive software package to facilitate performability modeling and evaluation, is presented. Example systems are studied and their performabilities are calculated. Each available METAPHOR command and array generator is described. Complete METAPHOR sessions are included.

  16. Meson Properties in a renormalizable version of the NJL model

    CERN Document Server

    Mota, A L; Hiller, B; Walliser, H; Mota, Andre L.; Hiller, Brigitte; Walliser, Hans

    1999-01-01

    In the present paper we implement a non-trivial and renormalizable extension of the NJL model. We discuss the advantages and shortcomings of this extended model compared to a usual effective Pauli-Villars regularized version. We show that both versions become equivalent in the case of a large cutoff. Various relevant mesonic observables are calculated and compared.

  17. H2A Production Model, Version 2 User Guide

    Energy Technology Data Exchange (ETDEWEB)

    Steward, D.; Ramsden, T.; Zuboy, J.

    2008-09-01

    The H2A Production Model analyzes the technical and economic aspects of central and forecourt hydrogen production technologies. Using a standard discounted cash flow rate of return methodology, it determines the minimum hydrogen selling price, including a specified after-tax internal rate of return from the production technology. Users have the option of accepting default technology input values--such as capital costs, operating costs, and capacity factor--from established H2A production technology cases or entering custom values. Users can also modify the model's financial inputs. This new version of the H2A Production Model features enhanced usability and functionality. Input fields are consolidated and simplified. New capabilities include performing sensitivity analyses and scaling analyses to various plant sizes. This User Guide helps users already familiar with the basic tenets of H2A hydrogen production cost analysis get started using the new version of the model. It introduces the basic elements of the model then describes the function and use of each of its worksheets.

  18. Result Summary for the Area 5 Radioactive Waste Management Site Performance Assessment Model Version 4.113

    Energy Technology Data Exchange (ETDEWEB)

    Shott, G. J.

    2012-04-15

    Preliminary results for Version 4.113 of the Nevada National Security Site Area 5 Radioactive Waste Management Site performance assessment model are summarized. Version 4.113 includes the Fiscal Year 2011 inventory estimate.

  19. DEVELOPMENT OF WATER CIRCULATION MODEL INCLUDING IRRIGATION

    Science.gov (United States)

    Kotsuki, Shunji; Tanaka, Kenji; Kojiri, Toshiharu; Hamaguchi, Toshio

    It is well known that since agricultural water withdrawal has much affect on water circulation system, accurate analysis of river discharge or water balance are difficult with less regard for it. In this study, water circulation model composed of land surface model and distributed runoff model is proposed at 10km 10km resolution. In this model, irrigation water, which is estimated with land surface model, is introduced to river discharge analysis. The model is applied to the Chao Phraya River in Thailand, and reproduced seasonal water balance. Additionally, the discharge on dry season simulated with the model is improved as a result of including irrigation. Since the model, which is basically developed from global data sets, simulated seasonal change of river discharge, it can be suggested that our model has university to other river basins.

  20. GCFM Users Guide Revision for Model Version 5.0

    Energy Technology Data Exchange (ETDEWEB)

    Keimig, Mark A.; Blake, Coleman

    1981-08-10

    This paper documents alterations made to the MITRE/DOE Geothermal Cash Flow Model (GCFM) in the period of September 1980 through September 1981. Version 4.0 of GCFM was installed on the computer at the DOE San Francisco Operations Office in August 1980. This Version has also been distributed to about a dozen geothermal industry firms, for examination and potential use. During late 1980 and 1981, a few errors detected in the Version 4.0 code were corrected, resulting in Version 4.1. If you are currently using GCFM Version 4.0, it is suggested that you make the changes to your code that are described in Section 2.0. User's manual changes listed in Section 3.0 and Section 4.0 should then also be made.

  1. Model Adequacy Analysis of Matching Record Versions in Nosql Databases

    Directory of Open Access Journals (Sweden)

    E. V. Tsviashchenko

    2015-01-01

    Full Text Available The article investigates a model of matching record versions. The goal of this work is to analyse the model adequacy. This model allows estimating a user’s processing time distribution of the record versions and a distribution of the record versions count. The second option of the model was used, according to which, for a client the time to process record versions depends explicitly on the number of updates, performed by the other users between the sequential updates performed by a current client. In order to prove the model adequacy the real experiment was conducted in the cloud cluster. The cluster contains 10 virtual nodes, provided by DigitalOcean Company. The Ubuntu Server 14.04 was used as an operating system (OS. The NoSQL system Riak was chosen for experiments. In the Riak 2.0 version and later provide “dotted vector versions” (DVV option, which is an extension of the classic vector clock. Their use guarantees, that the versions count, simultaneously stored in DB, will not exceed the count of clients, operating in parallel with a record. This is very important while conducting experiments. For developing the application the java library, provided by Riak, was used. The processes run directly on the nodes. In experiment two records were used. They are: Z – the record, versions of which are handled by clients; RZ – service record, which contains record update counters. The application algorithm can be briefly described as follows: every client reads versions of the record Z, processes its updates using the RZ record counters, and saves treated record in database while old versions are deleted form DB. Then, a client rereads the RZ record and increments counters of updates for the other clients. After that, a client rereads the Z record, saves necessary statistics, and deliberates the results of processing. In the case of emerging conflict because of simultaneous updates of the RZ record, the client obtains all versions of that

  2. The Lagrangian particle dispersion model FLEXPART version 10

    Science.gov (United States)

    Pisso, Ignacio; Sollum, Espen; Grythe, Henrik; Kristiansen, Nina; Cassiani, Massimo; Eckhardt, Sabine; Thompson, Rona; Groot Zwaaftnik, Christine; Evangeliou, Nikolaos; Hamburger, Thomas; Sodemann, Harald; Haimberger, Leopold; Henne, Stephan; Brunner, Dominik; Burkhart, John; Fouilloux, Anne; Fang, Xuekun; Phillip, Anne; Seibert, Petra; Stohl, Andreas

    2017-04-01

    The Lagrangian particle dispersion model FLEXPART was in its first original release in 1998 designed for calculating the long-range and mesoscale dispersion of air pollutants from point sources, such as after an accident in a nuclear power plant. The model has now evolved into a comprehensive tool for atmospheric transport modelling and analysis. Its application fields are extended to a range of atmospheric transport processes for both atmospheric gases and aerosols, e.g. greenhouse gases, short-lived climate forces like black carbon, volcanic ash and gases as well as studies of the water cycle. We present the newest release, FLEXPART version 10. Since the last publication fully describing FLEXPART (version 6.2), the model code has been parallelised in order to allow for the possibility to speed up computation. A new, more detailed gravitational settling parametrisation for aerosols was implemented, and the wet deposition scheme for aerosols has been heavily modified and updated to provide a more accurate representation of this physical process. In addition, an optional new turbulence scheme for the convective boundary layer is available, that considers the skewness in the vertical velocity distribution. Also, temporal variation and temperature dependence of the OH-reaction are included. Finally, user input files are updated to a more convenient and user-friendly namelist format, and the option to produce the output-files in netCDF-format instead of binary format is implemented. We present these new developments and show recent model applications. Moreover, we also introduce some tools for the preparation of the meteorological input data, as well as for the processing of FLEXPART output data.

  3. An Integrated Biochemistry Laboratory, Including Molecular Modeling

    Science.gov (United States)

    Hall, Adele J. Wolfson Mona L.; Branham, Thomas R.

    1996-11-01

    purity of the final preparation. Using mini-gels (BioRad Mini-Protean II apparatus), each group can pour, run, and stain their own 8 7.3-cm gel within the lab period; destaining can be carried out at any time afterward. The main contaminating band observed is ovalbumin, at a molecular weight of 46,000. Computer Modeling Using the program Quanta (MSI, Burlington, MA) on Indigo workstations (Silicon Graphics, Hudson, MA), the students retrieve coordinates from an MSI version of the Protein Data Bank, display the structure, and rationalize what changes would occur with a mutated form of the protein. Even for those who do not have Quanta or analogous programs, structural coordinates are available through the Internet. Students are prepared for their independent use of the molecular modeling workstations through a series of tutorials during the course of the semester. These exercises require that the students become familiar with specific applications of Quanta, including setting secondary conformation and hydrogen bonds, energy calculations, selectively displaying parts of molecules, measuring interatomic distances, and editing existing proteins. This introduction to macromolecular modeling is comparable to that suggested by Harvey and Tan (17) as a brief introduction to the field. Peer Review For each writing assignment (short paper and grant proposal), one week of lab is devoted to the peer review process. Students are to come to lab with a draft of their paper and a cover letter to their reviewers, which states how far they believe they are in the writing process; what they like and don't like about their work at this stage; and in what specific areas they need help (e.g., audience level, organization, use of references). They exchange papers, reading two or three during the course of the lab period. For each paper, they fill out a peer review form, which requires that they summarize the paper; look for clarity of presentation, appropriate citations, and use of others

  4. Solar Advisor Model User Guide for Version 2.0

    Energy Technology Data Exchange (ETDEWEB)

    Gilman, P.; Blair, N.; Mehos, M.; Christensen, C.; Janzou, S.; Cameron, C.

    2008-08-01

    The Solar Advisor Model (SAM) provides a consistent framework for analyzing and comparing power system costs and performance across the range of solar technologies and markets, from photovoltaic systems for residential and commercial markets to concentrating solar power and large photovoltaic systems for utility markets. This manual describes Version 2.0 of the software, which can model photovoltaic and concentrating solar power technologies for electric applications for several markets. The current version of the Solar Advisor Model does not model solar heating and lighting technologies.

  5. Renormalized versions of the massless Thirring model

    CERN Document Server

    Casana, R

    2003-01-01

    We present a non-perturbative study of the (1+1)-dimensional massless Thirring model by using path integral methods. The model presents two features, one of them has a local gauge symmetry that is implemented at quantum level and the other one without this symmetry. We make a detailed analysis of their UV divergence structure, a non-perturbative regularization and renormalization processes are proposed.

  6. An Open Platform for Processing IFC Model Versions

    Institute of Scientific and Technical Information of China (English)

    Mohamed Nour; Karl Beucke

    2008-01-01

    The IFC initiative from the International Alliance of Interoperability has been developing since the mid-nineties through several versions.This paper addresses the problem of binding the growing number of IFC versions and their EXPRESS definitions to programming environments (Java and.NET).The solution developed in this paper automates the process of generating early binding classes,whenever a new version of the IFC model is released.Furthermore, a runtime instantiation of the generated eady binding classes takes place by importing IFC-STEP ISO 10303-P21 models.The user can navigate the IFC STEP model with relevance to the defining EXPRESS-schema,modify,deletem,and create new instances.These func-tionalities are considered to be a basis for any IFC based implementation.It enables researchers to experi-ment the IFC model independently from any software application.

  7. Correction, improvement and model verification of CARE 3, version 3

    Science.gov (United States)

    Rose, D. M.; Manke, J. W.; Altschul, R. E.; Nelson, D. L.

    1987-01-01

    An independent verification of the CARE 3 mathematical model and computer code was conducted and reported in NASA Contractor Report 166096, Review and Verification of CARE 3 Mathematical Model and Code: Interim Report. The study uncovered some implementation errors that were corrected and are reported in this document. The corrected CARE 3 program is called version 4. Thus the document, correction. improvement, and model verification of CARE 3, version 3 was written in April 1984. It is being published now as it has been determined to contain a more accurate representation of CARE 3 than the preceding document of April 1983. This edition supercedes NASA-CR-166122 entitled, 'Correction and Improvement of CARE 3,' version 3, April 1983.

  8. Models of bovine babesiosis including juvenile cattle.

    Science.gov (United States)

    Saad-Roy, C M; Shuai, Zhisheng; van den Driessche, P

    2015-03-01

    Bovine Babesiosis in cattle is caused by the transmission of protozoa of Babesia spp. by ticks as vectors. Juvenile cattle (Babesiosis, rarely show symptoms, and acquire immunity upon recovery. Susceptibility to the disease varies between breeds of cattle. Models of the dynamics of Bovine Babesiosis transmitted by the cattle tick that include these factors are formulated as systems of ordinary differential equations. Basic reproduction numbers are calculated, and it is proved that if these numbers are below the threshold value of one, then Bovine Babesiosis dies out. However, above the threshold number of one, the disease may approach an endemic state. In this case, control measures are suggested by determining target reproduction numbers. The percentage of a particular population (for example, the adult bovine population) needed to be controlled to eradicate the disease is evaluated numerically using Columbia data from the literature.

  9. The integrated Earth System Model Version 1: formulation and functionality

    Energy Technology Data Exchange (ETDEWEB)

    Collins, William D.; Craig, Anthony P.; Truesdale, John E.; Di Vittorio, Alan; Jones, Andrew D.; Bond-Lamberty, Benjamin; Calvin, Katherine V.; Edmonds, James A.; Kim, Son H.; Thomson, Allison M.; Patel, Pralit L.; Zhou, Yuyu; Mao, Jiafu; Shi, Xiaoying; Thornton, Peter E.; Chini, Louise M.; Hurtt, George C.

    2015-07-23

    The integrated Earth System Model (iESM) has been developed as a new tool for pro- jecting the joint human/climate system. The iESM is based upon coupling an Integrated Assessment Model (IAM) and an Earth System Model (ESM) into a common modeling in- frastructure. IAMs are the primary tool for describing the human–Earth system, including the sources of global greenhouse gases (GHGs) and short-lived species, land use and land cover change, and other resource-related drivers of anthropogenic climate change. ESMs are the primary scientific tools for examining the physical, chemical, and biogeochemical impacts of human-induced changes to the climate system. The iESM project integrates the economic and human dimension modeling of an IAM and a fully coupled ESM within a sin- gle simulation system while maintaining the separability of each model if needed. Both IAM and ESM codes are developed and used by large communities and have been extensively applied in recent national and international climate assessments. By introducing heretofore- omitted feedbacks between natural and societal drivers, we can improve scientific under- standing of the human–Earth system dynamics. Potential applications include studies of the interactions and feedbacks leading to the timing, scale, and geographic distribution of emissions trajectories and other human influences, corresponding climate effects, and the subsequent impacts of a changing climate on human and natural systems. This paper de- scribes the formulation, requirements, implementation, testing, and resulting functionality of the first version of the iESM released to the global climate community.

  10. Smart Grid Interoperability Maturity Model Beta Version

    Energy Technology Data Exchange (ETDEWEB)

    Widergren, Steven E.; Drummond, R.; Giroti, Tony; Houseman, Doug; Knight, Mark; Levinson, Alex; longcore, Wayne; Lowe, Randy; Mater, J.; Oliver, Terry V.; Slack, Phil; Tolk, Andreas; Montgomery, Austin

    2011-12-02

    The GridWise Architecture Council was formed by the U.S. Department of Energy to promote and enable interoperability among the many entities that interact with the electric power system. This balanced team of industry representatives proposes principles for the development of interoperability concepts and standards. The Council provides industry guidance and tools that make it an available resource for smart grid implementations. In the spirit of advancing interoperability of an ecosystem of smart grid devices and systems, this document presents a model for evaluating the maturity of the artifacts and processes that specify the agreement of parties to collaborate across an information exchange interface. You are expected to have a solid understanding of large, complex system integration concepts and experience in dealing with software component interoperation. Those without this technical background should read the Executive Summary for a description of the purpose and contents of the document. Other documents, such as checklists, guides, and whitepapers, exist for targeted purposes and audiences. Please see the www.gridwiseac.org website for more products of the Council that may be of interest to you.

  11. AISIM (Automated Interactive Simulation Modeling System) VAX Version Training Manual.

    Science.gov (United States)

    1985-02-01

    AD-Ri6t 436 AISIM (RUTOMATED INTERACTIVE SIMULATION MODELING 1/2 SYSTEM) VAX VERSION TRAI (U) HUGHES AIRCRAFT CO FULLERTON CA GROUND SYSTEMS GROUP S...Continue on reverse if necessary and Identify by block number) THIS DOCUMENT IS THE TRAINING MANUAL FOR THE AUTOMATED INTERACTIVE SIMULATION MODELING SYSTEM...form. Page 85 . . . . . . . . APPENDIX B SIMULATION REPORT FOR WORKING EXAMPLE Pa jPage.8 7AD-Ai6i 46 ISIM (AUTOMATED INTERACTIVE SIMULATION MODELING 2

  12. IDC Use Case Model Survey Version 1.1.

    Energy Technology Data Exchange (ETDEWEB)

    Harris, James Mark [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States); Carr, Dorthe B. [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States)

    2015-02-01

    This document contains the brief descriptions for the actors and use cases contained in the IDC Use Case Model. REVISIONS Version Date Author/Team Revision Description Authorized by V1.0 12/2014 SNL IDC Reengineering Project Team Initial delivery M. Harris V1.1 2/2015 SNL IDC Reengineering Project Team Iteration I2 Review Comments M. Harris

  13. IDC Use Case Model Survey Version 1.0.

    Energy Technology Data Exchange (ETDEWEB)

    Carr, Dorthe B.; Harris, James M.

    2014-12-01

    This document contains the brief descriptions for the actors and use cases contained in the IDC Use Case Model Survey. REVISIONS Version Date Author/Team Revision Description Authorized by V1.0 12/2014 IDC Re- engineering Project Team Initial delivery M. Harris

  14. COPAT - towards a recommended model version of COSMO-CLM

    Science.gov (United States)

    Anders, Ivonne; Brienen, Susanne; Eduardo, Bucchignani; Ferrone, Andrew; Geyer, Beate; Keuler, Klaus; Lüthi, Daniel; Mertens, Mariano; Panitz, Hans-Jürgen; Saeed, Sajjad; Schulz, Jan-Peter; Wouters, Hendrik

    2016-04-01

    The regional climate model COSMO-CLM is a community model (www.clm-community.com). In close collaboration with the COSMO-consortium the model is further developed by the community members for climate applications. One of the tasks of the community is to give a recommendation on the model version and to evaluate the models performance. The COPAT (Coordinated Parameter Testing) is a voluntary community effort to allow different institutions to carry out model simulations systematically by different institutions in order to test new model options and to find a satisfactory model setup for hydrostatic climate simulations over Europe. We will present the COPAT method used to achieve the latest recommended model version of COSMO-CLM (COSMO5.0_clm6). The simulations cover the EURO-CORDEX domain at two spatial resolutions 0.44° and 0.11°. They used ERAinterim forcing data for the time period of 1979-2000. Interpolated forcing data has been prepared once to ensure that all participating groups used identical forcing. The evaluation of each individual run has been performed for the time period 1981-2000 by using ETOOL and ETOOL-VIS. These tools have been developed within the community to evaluate standard COSMO-CLM output in comparison to observations provided by EOBS and CRU. COPAT was structured in three phases. In Phase 1 all participating institutions performed a reference run on their individual computing platforms and tested the influence of single model options on the results afterwards. Derived from the results of Phase 1 the most promising options were used in combinations in the second phase (Phase 2). These first two phases of COPAT consist of more than 100 simulations with a spatial resolution of 0.44°. Based on the best setup identified in Phase 2 a calibration of eight tuning parameters has been carried out following Bellbrat et al. (2012) in Phase 3. A final simulation with the calibrated parameters has been set up at a higher resolution of 0.11°. The

  15. Seepage Model for PA Including Dift Collapse

    Energy Technology Data Exchange (ETDEWEB)

    G. Li; C. Tsang

    2000-12-20

    The purpose of this Analysis/Model Report (AMR) is to document the predictions and analysis performed using the Seepage Model for Performance Assessment (PA) and the Disturbed Drift Seepage Submodel for both the Topopah Spring middle nonlithophysal and lower lithophysal lithostratigraphic units at Yucca Mountain. These results will be used by PA to develop the probability distribution of water seepage into waste-emplacement drifts at Yucca Mountain, Nevada, as part of the evaluation of the long term performance of the potential repository. This AMR is in accordance with the ''Technical Work Plan for Unsaturated Zone (UZ) Flow and Transport Process Model Report'' (CRWMS M&O 2000 [153447]). This purpose is accomplished by performing numerical simulations with stochastic representations of hydrological properties, using the Seepage Model for PA, and evaluating the effects of an alternative drift geometry representing a partially collapsed drift using the Disturbed Drift Seepage Submodel. Seepage of water into waste-emplacement drifts is considered one of the principal factors having the greatest impact of long-term safety of the repository system (CRWMS M&O 2000 [153225], Table 4-1). This AMR supports the analysis and simulation that are used by PA to develop the probability distribution of water seepage into drift, and is therefore a model of primary (Level 1) importance (AP-3.15Q, ''Managing Technical Product Inputs''). The intended purpose of the Seepage Model for PA is to support: (1) PA; (2) Abstraction of Drift-Scale Seepage; and (3) Unsaturated Zone (UZ) Flow and Transport Process Model Report (PMR). Seepage into drifts is evaluated by applying numerical models with stochastic representations of hydrological properties and performing flow simulations with multiple realizations of the permeability field around the drift. The Seepage Model for PA uses the distribution of permeabilities derived from air injection testing in

  16. OPIC: a kit for rapid merit function construction for use with all versions of OSLO, including OSLO EDU

    Science.gov (United States)

    Blandford, Brian

    2005-09-01

    The history of lens design software is sadly littered with accounts of excellent programs which fell by the wayside for lack of support. Others evolved through various package formats to form the foundation of today's very successful commercial software. One example of this is the Imperial College lens design program developed throughout the 1960s, 1970s and 1980s by Charles Wynne, Michael Kidger, Prudence Wormell, and others. This program (best known as the Kidger Optics Ltd SIGMA) produced many excellent designs over the years. One reason was that the ray patterns and weighting factors for operands in the default merit function had been carefully honed through experience, to produce rapid convergence on the global optimum from a likely starting point. This paper describes a suite of optimisation raysets and weighted operands written in the C-like OSLO compiled macro language CCL, and modeled on the Imperial College tradition. It is available for free download from http://www.lambdares.com/techsupport/kb/index.phtml. Its prime function is to provide a fast, easily understood introduction to merit function construction for the beginner. One version is for use on OSLO EDU, the free version of OSLO, which is also available from the Lambda Research Corporation website. This paper demonstrates how OPIC can be used to locate, from a remote starting point, the global minimum of the "monochromatic quartet," the lens design problem from the SPIE 1990 International Lens Design Conference.

  17. Enhanced battery model including temperature effects

    NARCIS (Netherlands)

    Rosca, B.; Wilkins, S.

    2013-01-01

    Within electric and hybrid vehicles, batteries are used to provide/buffer the energy required for driving. However, battery performance varies throughout the temperature range specific to automotive applications, and as such, models that describe this behaviour are required. This paper presents a dy

  18. Enhanced battery model including temperature effects

    NARCIS (Netherlands)

    Rosca, B.; Wilkins, S.

    2013-01-01

    Within electric and hybrid vehicles, batteries are used to provide/buffer the energy required for driving. However, battery performance varies throughout the temperature range specific to automotive applications, and as such, models that describe this behaviour are required. This paper presents a dy

  19. Enhanced battery model including temperature effects

    NARCIS (Netherlands)

    Rosca, B.; Wilkins, S.

    2013-01-01

    Within electric and hybrid vehicles, batteries are used to provide/buffer the energy required for driving. However, battery performance varies throughout the temperature range specific to automotive applications, and as such, models that describe this behaviour are required. This paper presents a

  20. The ``Nordic`` HBV model. Description and documentation of the model version developed for the project Climate Change and Energy Production

    Energy Technology Data Exchange (ETDEWEB)

    Saelthun, N.R.

    1996-12-31

    The model described in this report is a version of the HBV model developed for the project Climate Change and Energy Production. This was a Nordic project aimed at evaluating the impacts of the Scandinavian countries including Greenland with emphasis on hydropower production. The model incorporates many of the features found in individual versions of the HBV model in use in the Nordic countries, and some new ones. It has catchment subdivision in altitude intervals, a simple vegetation parametrization including interception, temperature based evapotranspiration calculation, lake evaporation, lake routing, glacier mass balance simulation, special functions for climate change simulations etc. The user interface is very basic, and the model is primarily intended for research and educational purposes. Commercial versions of the model should be used for operational implementations. 5 refs., 4 figs., 1 tab.

  1. RELAP5-3D Code Includes Athena Features and Models

    Energy Technology Data Exchange (ETDEWEB)

    Richard A. Riemke; Cliff B. Davis; Richard R. Schultz

    2006-07-01

    Version 2.3 of the RELAP5-3D computer program includes all features and models previously available only in the ATHENA version of the code. These include the addition of new working fluids (i.e., ammonia, blood, carbon dioxide, glycerol, helium, hydrogen, lead-bismuth, lithium, lithium-lead, nitrogen, potassium, sodium, and sodium-potassium) and a magnetohydrodynamic model that expands the capability of the code to model many more thermal-hydraulic systems. In addition to the new working fluids along with the standard working fluid water, one or more noncondensable gases (e.g., air, argon, carbon dioxide, carbon monoxide, helium, hydrogen, krypton, nitrogen, oxygen, sf6, xenon) can be specified as part of the vapor/gas phase of the working fluid. These noncondensable gases were in previous versions of RELAP5- 3D. Recently four molten salts have been added as working fluids to RELAP5-3D Version 2.4, which has had limited release. These molten salts will be in RELAP5-3D Version 2.5, which will have a general release like RELAP5-3D Version 2.3. Applications that use these new features and models are discussed in this paper.

  2. Semi-holographic model including the radiation component

    CERN Document Server

    del Campo, Sergio; Magaña, Juan; Villanueva, J R

    2014-01-01

    In this letter we study the semi holographic model which corresponds to the radiative version of the model proposed by Zhang et al. (Phys. Lett. B 694 (2010), 177) and revisited by C\\'ardenas et al. (Mon. Not. Roy. Astron. Soc. 438 (2014), 3603). This inclusion makes the model more realistic, so allows us to test it with current observational data and then answer if the inconsistency reported by C\\'ardenas et al. is relaxed.

  3. Model Versions and Fast Algorithms for Network Epidemiology

    Institute of Scientific and Technical Information of China (English)

    Petter Holme

    2014-01-01

    Network epidemiology has become a core framework for investigating the role of human contact patterns in the spreading of infectious diseases. In network epidemiology, one represents the contact structure as a network of nodes (individuals) connected by links (sometimes as a temporal network where the links are not continuously active) and the disease as a compartmental model (where individuals are assigned states with respect to the disease and follow certain transition rules between the states). In this paper, we discuss fast algorithms for such simulations and also compare two commonly used versions,one where there is a constant recovery rate (the number of individuals that stop being infectious per time is proportional to the number of such people);the other where the duration of the disease is constant. The results show that, for most practical purposes, these versions are qualitatively the same.

  4. Using the Global Forest Products Model (GFPM version 2016 with BPMPD)

    Science.gov (United States)

    Joseph Buongiorno; Shushuai   Zhu

    2016-01-01

     The GFPM is an economic model of global production, consumption and trade of forest products. The original formulation and several applications are described in Buongiorno et al. (2003). However, subsequent versions, including the GFPM 2016 reflect significant changes and extensions. The GFPM 2016 software uses the...

  5. Stochastic hyperfine interactions modeling library-Version 2

    Science.gov (United States)

    Zacate, Matthew O.; Evenson, William E.

    2016-02-01

    The stochastic hyperfine interactions modeling library (SHIML) provides a set of routines to assist in the development and application of stochastic models of hyperfine interactions. The library provides routines written in the C programming language that (1) read a text description of a model for fluctuating hyperfine fields, (2) set up the Blume matrix, upon which the evolution operator of the system depends, and (3) find the eigenvalues and eigenvectors of the Blume matrix so that theoretical spectra of experimental techniques that measure hyperfine interactions can be calculated. The optimized vector and matrix operations of the BLAS and LAPACK libraries are utilized. The original version of SHIML constructed and solved Blume matrices for methods that measure hyperfine interactions of nuclear probes in a single spin state. Version 2 provides additional support for methods that measure interactions on two different spin states such as Mössbauer spectroscopy and nuclear resonant scattering of synchrotron radiation. Example codes are provided to illustrate the use of SHIML to (1) generate perturbed angular correlation spectra for the special case of polycrystalline samples when anisotropy terms of higher order than A22 can be neglected and (2) generate Mössbauer spectra for polycrystalline samples for pure dipole or pure quadrupole transitions.

  6. Description and evaluation of the Model for Ozone and Related chemical Tracers, version 4 (MOZART-4

    Directory of Open Access Journals (Sweden)

    L. K. Emmons

    2010-01-01

    Full Text Available The Model for Ozone and Related chemical Tracers, version 4 (MOZART-4 is an offline global chemical transport model particularly suited for studies of the troposphere. The updates of the model from its previous version MOZART-2 are described, including an expansion of the chemical mechanism to include more detailed hydrocarbon chemistry and bulk aerosols. Online calculations of a number of processes, such as dry deposition, emissions of isoprene and monoterpenes and photolysis frequencies, are now included. Results from an eight-year simulation (2000–2007 are presented and evaluated. The MOZART-4 source code and standard input files are available for download from the NCAR Community Data Portal (http://cdp.ucar.edu.

  7. Pilot Wave model that includes creation and annihilation of particles

    CERN Document Server

    Sverdlov, Roman

    2010-01-01

    The purpose of this paper is to come up with a Pilot Wave model of quantum field theory that incorporates particle creation and annihilation without sacrificing determinism. This has been previously attempted in an article by the same author titled "Incorporating particle creation and annihilation in Pilot Wave model", in a much less satisfactory way. In this paper I would like to "clean up" some of the things. In particular, I would like to get rid of a very unnatural concept of "visibility" of particles, which makes the model much simpler. On the other hand, I would like to add a mechanism for decoherence, which was absent in the previous version.

  8. Software Engineering Designs for Super-Modeling Different Versions of CESM Models using DART

    Science.gov (United States)

    Kluzek, Erik; Duane, Gregory; Tribbia, Joe; Vertenstein, Mariana

    2014-05-01

    The super-modeling approach connects different models together at run time in order to provide run time feedbacks between the models and thus synchronize the models. This method reduces model bias further than after-the-fact averaging of model outputs. We explore different designs to connect different configurations and versions of an IPCC class climate model - the Community Earth System Model (CESM). We build on the Data Assimilation Research Test-bed (DART) software to provide data assimilation from truth as well as to provide a software framework to link different model configurations together. We show a system building on DART that uses a Python script to do simple nudging between three versions of the atmosphere model in CESM (the Community Atmosphere Model (CAM) versions three, four and five).

  9. 19-vertex version of the fully frustrated XY model

    Science.gov (United States)

    Knops, Yolanda M. M.; Nienhuis, Bernard; Knops, Hubert J. F.; Blöte, Henk W. J.

    1994-07-01

    We investigate a 19-vertex version of the two-dimensional fully frustrated XY (FFXY) model. We construct Yang-Baxter equations for this model and show that there is no solution. Therefore we have chosen a numerical approach based on the transfer matrix. The results show that a coupled XY Ising model is in the same universality class as the FFXY model. We find that the phase coupling over an Ising wall is irrelevant at criticality. This leads to a correction of earlier determinations of the dimension x*h,Is of the Ising disorder operator. We find x*h,Is=0.123(5) and a conformal anomaly c=1.55(5). These results are consistent with the hypothesis that the FFXY model behaves as a superposition of an Ising model and an XY model. However, the dimensions associated with the energy, xt=0.77(3), and with the XY magnetization xh,XY~=0.17, refute this hypothesis.

  10. [Psychometric properties of the French version of the Effort-Reward Imbalance model].

    Science.gov (United States)

    Niedhammer, I; Siegrist, J; Landre, M F; Goldberg, M; Leclerc, A

    2000-10-01

    Two main models are currently used to evaluate psychosocial factors at work: the Job Strain model developed by Karasek and the Effort-Reward Imbalance model. A French version of the first model has been validated for the dimensions of psychological demands and decision latitude. As regards the second one evaluating three dimensions (extrinsic effort, reward, and intrinsic effort), there are several versions in different languages, but until recently there was no validated French version. The objective of this study was to explore the psychometric properties of the French version of the Effort-Reward Imbalance model in terms of internal consistency, factorial validity, and discriminant validity. The present study was based on the GAZEL cohort and included the 10 174 subjects who were working at the French national electric and gas company (EDF-GDF) and answered the questionnaire in 1998. A French version of Effort-Reward Imbalance was included in this questionnaire. This version was obtained by a standard forward/backward translation procedure. Internal consistency was satisfactory for the three scales of extrinsic effort, reward, and intrinsic effort: Cronbach's Alpha coefficients higher than 0.7 were observed. A one-factor solution was retained for the factor analysis of the scale of extrinsic effort. A three-factor solution was retained for the factor analysis of reward, and these dimensions were interpreted as the factor analysis of intrinsic effort did not support the expected four-dimension structure. The analysis of discriminant validity displayed significant associations between measures of Effort-Reward Imbalance and the variables of sex, age, education level, and occupational grade. This study is the first one supporting satisfactory psychometric properties of the French version of the Effort-Reward Imbalance model. However, the factorial validity of intrinsic effort could be questioned. Furthermore, as most previous studies were based on male samples

  11. The Hamburg Oceanic Carbon Cycle Circulation Model. Version 1. Version 'HAMOCC2s' for long time integrations

    Energy Technology Data Exchange (ETDEWEB)

    Heinze, C.; Maier-Reimer, E. [Max-Planck-Institut fuer Meteorologie, Hamburg (Germany)

    1999-11-01

    The Hamburg Ocean Carbon Cycle Circulation Model (HAMOCC, configuration HAMOCC2s) predicts the atmospheric carbon dioxide partial pressure (as induced by oceanic processes), production rates of biogenic particulate matter, and geochemical tracer distributions in the water column as well as the bioturbated sediment. Besides the carbon cycle this model version includes also the marine silicon cycle (silicic acid in the water column and the sediment pore waters, biological opal production, opal flux through the water column and opal sediment pore water interaction). The model is based on the grid and geometry of the LSG ocean general circulation model (see the corresponding manual, LSG=Large Scale Geostrophic) and uses a velocity field provided by the LSG-model in 'frozen' state. In contrast to the earlier version of the model (see Report No. 5), the present version includes a multi-layer sediment model of the bioturbated sediment zone, allowing for variable tracer inventories within the complete model system. (orig.)

  12. A Constrained and Versioned Data Model for TEAM Data

    Science.gov (United States)

    Andelman, S.; Baru, C.; Chandra, S.; Fegraus, E.; Lin, K.

    2009-04-01

    The objective of the Tropical Ecology Assessment and Monitoring Network (www.teamnetwork.org) is "To generate real time data for monitoring long-term trends in tropical biodiversity through a global network of TEAM sites (i.e. field stations in tropical forests), providing an early warning system on the status of biodiversity to effectively guide conservation action". To achieve this, the TEAM Network operates by collecting data via standardized protocols at TEAM Sites. The standardized TEAM protocols include the Climate, Vegetation and Terrestrial Vertebrate Protocols. Some sites also implement additional protocols. There are currently 7 TEAM Sites with plans to grow the network to 15 by June 30, 2009 and 50 TEAM Sites by the end of 2010. At each TEAM Site, data is gathered as defined by the protocols and according to a predefined sampling schedule. The TEAM data is organized and stored in a database based on the TEAM spatio-temporal data model. This data model is at the core of the TEAM Information System - it consumes and executes spatio-temporal queries, and analytical functions that are performed on TEAM data, and defines the object data types, relationships and operations that maintain database integrity. The TEAM data model contains object types including types for observation objects (e.g. bird, butterfly and trees), sampling unit, person, role, protocol, site and the relationship of these object types. Each observation data record is a set of attribute values of an observation object and is always associated with a sampling unit, an observation timestamp or time interval, a versioned protocol and data collectors. The operations on the TEAM data model can be classified as read operations, insert operations and update operations. Following are some typical operations: The operation get(site, protocol, [sampling unit block, sampling unit,] start time, end time) returns all data records using the specified protocol and collected at the specified site, block

  13. Looking for the dichromatic version of a colour vision model

    Science.gov (United States)

    Capilla, P.; Luque, M. J.; Díez-Ajenjo, M. A.

    2004-09-01

    Different hypotheses on the sensitivity of photoreceptors and post-receptoral mechanisms were introduced in different colour vision models to derive acceptable dichromatic versions. Models with one (Ingling and T'sou, Guth et al, Boynton) and two linear opponent stages (DeValois and DeValois) and with two non-linear opponent stages (ATD95) were used. The L- and M-cone sensitivities of red-green defectives were either set to zero (cone-loss hypothesis) or replaced by that of a different cone-type (cone-replacement hypothesis), whereas for tritanopes the S-cone sensitivity was always assumed to be zero. The opponent mechanisms were either left unchanged or nulled in one or in all the opponent stages. The dichromatic models obtained have been evaluated according to their performance in three tests: computation of the spectral sensitivity of the dichromatic perceptual mechanisms, prediction of the colour loci describing dichromatic appearance and prediction of the gamut of colours that dichromats perceive as normal subjects do.

  14. The temporal version of the pediatric sepsis biomarker risk model.

    Directory of Open Access Journals (Sweden)

    Hector R Wong

    Full Text Available PERSEVERE is a risk model for estimating mortality probability in pediatric septic shock, using five biomarkers measured within 24 hours of clinical presentation.Here, we derive and test a temporal version of PERSEVERE (tPERSEVERE that considers biomarker values at the first and third day following presentation to estimate the probability of a "complicated course", defined as persistence of ≥2 organ failures at seven days after meeting criteria for septic shock, or death within 28 days.Biomarkers were measured in the derivation cohort (n = 225 using serum samples obtained during days 1 and 3 of septic shock. Classification and Regression Tree (CART analysis was used to derive a model to estimate the risk of a complicated course. The derived model was validated in the test cohort (n = 74, and subsequently updated using the combined derivation and test cohorts.A complicated course occurred in 23% of the derivation cohort subjects. The derived model had a sensitivity for a complicated course of 90% (95% CI 78-96, specificity was 70% (62-77, positive predictive value was 47% (37-58, and negative predictive value was 96% (91-99. The area under the receiver operating characteristic curve was 0.85 (0.79-0.90. Similar test characteristics were observed in the test cohort. The updated model had a sensitivity of 91% (81-96, a specificity of 70% (64-76, a positive predictive value of 47% (39-56, and a negative predictive value of 96% (92-99.tPERSEVERE reasonably estimates the probability of a complicated course in children with septic shock. tPERSEVERE could potentially serve as an adjunct to physiological assessments for monitoring how risk for poor outcomes changes during early interventions in pediatric septic shock.

  15. Estimating hybrid choice models with the new version of Biogeme

    OpenAIRE

    Bierlaire, Michel

    2010-01-01

    Hybrid choice models integrate many types of discrete choice modeling methods, including latent classes and latent variables, in order to capture concepts such as perceptions, attitudes, preferences, and motivatio (Ben-Akiva et al., 2002). Although they provide an excellent framework to capture complex behavior patterns, their use in applications remains rare in the literature due to the difficulty of estimating the models. In this talk, we provide a short introduction to hybrid choice model...

  16. Preliminary Evaluation of the Community Multiscale Air Quality (CMAQ) Model Version 5.1

    Science.gov (United States)

    The AMAD will perform two annual CMAQ model simulations, one with the current publically available version of the CMAQ model (v5.0.2) and the other with the beta version of the new model (v5.1). The results of each model simulation will then be compared to observations and the pe...

  17. Evaluation of the Community Multiscale Air Quality (CMAQ) Model Version 5.1

    Science.gov (United States)

    The AMAD will performed two CMAQ model simulations, one with the current publically available version of the CMAQ model (v5.0.2) and the other with the new version of the CMAQ model (v5.1). The results of each model simulation are compared to observations and the performance of t...

  18. Land-Use Portfolio Modeler, Version 1.0

    Science.gov (United States)

    Taketa, Richard; Hong, Makiko

    2010-01-01

    -on-investment. The portfolio model, now known as the Land-Use Portfolio Model (LUPM), provided the framework for the development of the Land-Use Portfolio Modeler, Version 1.0 software (LUPM v1.0). The software provides a geographic information system (GIS)-based modeling tool for evaluating alternative risk-reduction mitigation strategies for specific natural-hazard events. The modeler uses information about a specific natural-hazard event and the features exposed to that event within the targeted study region to derive a measure of a given mitigation strategy`s effectiveness. Harnessing the spatial capabilities of a GIS enables the tool to provide a rich, interactive mapping environment in which users can create, analyze, visualize, and compare different

  19. New versions of the BDS/GNSS zenith tropospheric delay model IGGtrop

    Science.gov (United States)

    Li, Wei; Yuan, Yunbin; Ou, Jikun; Chai, Yanju; Li, Zishen; Liou, Yuei-An; Wang, Ningbo

    2015-01-01

    The initial IGGtrop model proposed for Chinese BDS (BeiDou System) is not very suitable for BDS/GNSS research and application due to its large data volume while it shows a global mean accuracy of 4 cm. New versions of the global zenith tropospheric delay (ZTD) model IGGtrop are developed through further investigation on the spatial and temporal characteristics of global ZTD. From global GNSS ZTD observations and weather reanalysis data, new ZTD characteristics are found and discussed in this study including: small and inconsistent seasonal variation in ZTD between and stable seasonal variation outside; weak zonal variation in ZTD at higher latitudes (north of and south of ) and at heights above 6 km, etc. Based on these analyses, new versions of IGGtrop, named , are established through employing corresponding strategies: using a simple algorithm for equatorial ZTD; generating an adaptive spatial grid with lower resolutions in regions where ZTD varies little; and creating a method for optimized storage of model parameters. Thus, the models require much less parameters than the IGGtrop model, nearly 3.1-21.2 % of that for the IGGtrop model. The three new versions are validated by five years of GNSS-derived ZTDs at 125 IGS sites, and it shows that: demonstrates the highest ZTD correction performance, similar to IGGtrop; requires the least model parameters; is moderate in both zenith delay prediction performance and number of model parameters. For the model, the biases at those IGS sites are between and 4.3 cm with a mean value of cm and RMS errors are between 2.1 and 8.5 cm with a mean value of 4.0 cm. Different BDS and other GNSS users can choose a suitable model according to their application and research requirements.

  20. Rasch analysis of the Persian version of PedsQLTM Oral Health Scale: further psychometric evaluation on item validity including differential item functioning

    Science.gov (United States)

    Lin, Chung-Ying; Kumar, Santhosh; Pakpour, Amir H.

    2016-01-01

    Background: The study aimed to further evaluate the psychometric properties of one recently developed oral health related quality of life (OHRQoL) instrument (PedsQL Oral Health Scale), including student self-report and parent-proxy report. Specifically, we tested the item validity,threshold order, local dependency, and differential item functioning (DIF) across gender and rater. Methods: This is a cross-sectional study, and study population was recruited in Qazvin, Iran using one-stage sampling with the unit of school. Students and their parents (1529 dyads) separately completed the Persian version of PedsQL Oral Health Scale. The psychometric properties were analyzed using Rasch rating scale model, including item validity, threshold order for response categories, and DIF across gender (boys vs. girls in student self-report) and rater (student self report vs. parent-proxy report). Results: All items had satisfactory in fit and outfit mean square error. One disordering category (the response of often) was found in parent-proxy report, while all categories were ordered in student self-report. All items were DIF-trivial across gender and rater. Conclusion: PedsQL Oral Health Scale is a valid instrument to measure OHRQoL. However, our results indicated that the parent-proxy report was inferior to the student self-report, and healthcare providers should primarily use the student self-report. PMID:27579258

  1. Digital elevation models for site investigation programme in Oskarshamn. Site description version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Brydsten, Lars; Stroemgren, Maarten [Umeaa Univ. (Sweden). Dept. of Biology and Environmental Science

    2005-06-01

    In the Oskarshamn area, a digital elevation model has been produced using elevation data from many elevation sources on both land and sea. Many elevation model users are only interested in elevation models over land, so the model has been designed in three versions: Version 1 describes land surface, lake water surface, and sea bottom. Version 2 describes land surface, sediment levels at lake bottoms, and sea bottoms. Version 3 describes land surface, sediment levels at lake bottoms, and sea surface. In cases where the different sources of data were not in point form 'such as existing elevation models of land or depth lines from nautical charts' they have been converted to point values using GIS software. Because data from some sources often overlaps with data from other sources, several tests were conducted to determine if both sources of data or only one source would be included in the dataset used for the interpolation procedure. The tests resulted in the decision to use only the source judged to be of highest quality for most areas with overlapping data sources. All data were combined into a database of approximately 3.3 million points unevenly spread over an area of about 800 km{sup 2}. The large number of data points made it difficult to construct the model with a single interpolation procedure, the area was divided into 28 sub-models that were processed one by one and finally merged together into one single model. The software ArcGis 8.3 and its extension Geostatistical Analysis were used for the interpolation. The Ordinary Kriging method was used for interpolation. This method allows both a cross validation and a validation before the interpolation is conducted. Cross validation with different Kriging parameters were performed and the model with the most reasonable statistics was chosen. Finally, a validation with the most appropriate Kriging parameters was performed in order to verify that the model fit unmeasured localities. Since both the

  2. Integrating Cloud Processes in the Community Atmosphere Model, Version 5.

    Energy Technology Data Exchange (ETDEWEB)

    Park, S.; Bretherton, Christopher S.; Rasch, Philip J.

    2014-09-15

    This paper provides a description on the parameterizations of global cloud system in CAM5. Compared to the previous versions, CAM5 cloud parameterization has the following unique characteristics: (1) a transparent cloud macrophysical structure that has horizontally non-overlapped deep cumulus, shallow cumulus and stratus in each grid layer, each of which has own cloud fraction, mass and number concentrations of cloud liquid droplets and ice crystals, (2) stratus-radiation-turbulence interaction that allows CAM5 to simulate marine stratocumulus solely from grid-mean RH without relying on the stability-based empirical empty stratus, (3) prognostic treatment of the number concentrations of stratus liquid droplets and ice crystals with activated aerosols and detrained in-cumulus condensates as the main sources and evaporation-sedimentation-precipitation of stratus condensate as the main sinks, and (4) radiatively active cumulus. By imposing consistency between diagnosed stratus fraction and prognosed stratus condensate, CAM5 is free from empty or highly-dense stratus at the end of stratus macrophysics. CAM5 also prognoses mass and number concentrations of various aerosol species. Thanks to the aerosol activation and the parameterizations of the radiation and stratiform precipitation production as a function of the droplet size, CAM5 simulates various aerosol indirect effects associated with stratus as well as direct effects, i.e., aerosol controls both the radiative and hydrological budgets. Detailed analysis of various simulations revealed that CAM5 is much better than CAM3/4 in the global performance as well as the physical formulation. However, several problems were also identifed, which can be attributed to inappropriate regional tuning, inconsistency between various physics parameterizations, and incomplete model physics. Continuous efforts are going on to further improve CAM5.

  3. Dynamic hysteresis modeling including skin effect using diffusion equation model

    Science.gov (United States)

    Hamada, Souad; Louai, Fatima Zohra; Nait-Said, Nasreddine; Benabou, Abdelkader

    2016-07-01

    An improved dynamic hysteresis model is proposed for the prediction of hysteresis loop of electrical steel up to mean frequencies, taking into account the skin effect. In previous works, the analytical solution of the diffusion equation for low frequency (DELF) was coupled with the inverse static Jiles-Atherton (JA) model in order to represent the hysteresis behavior for a lamination. In the present paper, this approach is improved to ensure the reproducibility of measured hysteresis loops at mean frequency. The results of simulation are compared with the experimental ones. The selected results for frequencies 50 Hz, 100 Hz, 200 Hz and 400 Hz are presented and discussed.

  4. Dynamic hysteresis modeling including skin effect using diffusion equation model

    Energy Technology Data Exchange (ETDEWEB)

    Hamada, Souad, E-mail: souadhamada@yahoo.fr [LSP-IE: Research Laboratory, Electrical Engineering Department, University of Batna, 05000 Batna (Algeria); Louai, Fatima Zohra, E-mail: fz_louai@yahoo.com [LSP-IE: Research Laboratory, Electrical Engineering Department, University of Batna, 05000 Batna (Algeria); Nait-Said, Nasreddine, E-mail: n_naitsaid@yahoo.com [LSP-IE: Research Laboratory, Electrical Engineering Department, University of Batna, 05000 Batna (Algeria); Benabou, Abdelkader, E-mail: Abdelkader.Benabou@univ-lille1.fr [L2EP, Université de Lille1, 59655 Villeneuve d’Ascq (France)

    2016-07-15

    An improved dynamic hysteresis model is proposed for the prediction of hysteresis loop of electrical steel up to mean frequencies, taking into account the skin effect. In previous works, the analytical solution of the diffusion equation for low frequency (DELF) was coupled with the inverse static Jiles-Atherton (JA) model in order to represent the hysteresis behavior for a lamination. In the present paper, this approach is improved to ensure the reproducibility of measured hysteresis loops at mean frequency. The results of simulation are compared with the experimental ones. The selected results for frequencies 50 Hz, 100 Hz, 200 Hz and 400 Hz are presented and discussed.

  5. Complexity, accuracy and practical applicability of different biogeochemical model versions

    Science.gov (United States)

    Los, F. J.; Blaas, M.

    2010-04-01

    The construction of validated biogeochemical model applications as prognostic tools for the marine environment involves a large number of choices particularly with respect to the level of details of the .physical, chemical and biological aspects. Generally speaking, enhanced complexity might enhance veracity, accuracy and credibility. However, very complex models are not necessarily effective or efficient forecast tools. In this paper, models of varying degrees of complexity are evaluated with respect to their forecast skills. In total 11 biogeochemical model variants have been considered based on four different horizontal grids. The applications vary in spatial resolution, in vertical resolution (2DH versus 3D), in nature of transport, in turbidity and in the number of phytoplankton species. Included models range from 15 year old applications with relatively simple physics up to present state of the art 3D models. With all applications the same year, 2003, has been simulated. During the model intercomparison it has been noticed that the 'OSPAR' Goodness of Fit cost function (Villars and de Vries, 1998) leads to insufficient discrimination of different models. This results in models obtaining similar scores although closer inspection of the results reveals large differences. In this paper therefore, we have adopted the target diagram by Jolliff et al. (2008) which provides a concise and more contrasting picture of model skill on the entire model domain and for the entire period of the simulations. Correctness in prediction of the mean and the variability are separated and thus enhance insight in model functioning. Using the target diagrams it is demonstrated that recent models are more consistent and have smaller biases. Graphical inspection of time series confirms this, as the level of variability appears more realistic, also given the multi-annual background statistics of the observations. Nevertheless, whether the improvements are all genuine for the particular

  6. Unsteady panel method for complex configurations including wake modeling

    CSIR Research Space (South Africa)

    Van Zyl, Lourens H

    2008-01-01

    Full Text Available implementations of the DLM are however not very versatile in terms of geometries that can be modeled. The ZONA6 code offers a versatile surface panel body model including a separated wake model, but uses a pressure panel method for lifting surfaces. This paper...

  7. Modeling Electric Double-Layers Including Chemical Reaction Effects

    DEFF Research Database (Denmark)

    Paz-Garcia, Juan Manuel; Johannesson, Björn; Ottosen, Lisbeth M.

    2014-01-01

    A physicochemical and numerical model for the transient formation of an electric double-layer between an electrolyte and a chemically-active flat surface is presented, based on a finite elements integration of the nonlinear Nernst-Planck-Poisson model including chemical reactions. The model works...

  8. SSM - SOLID SURFACE MODELER, VERSION 6.0

    Science.gov (United States)

    Goza, S. P.

    1994-01-01

    The Solid Surface Modeler (SSM) is an interactive graphics software application for solid-shaded and wireframe three- dimensional geometric modeling. It enables the user to construct models of real-world objects as simple as boxes or as complex as Space Station Freedom. The program has a versatile user interface that, in many cases, allows mouse input for intuitive operation or keyboard input when accuracy is critical. SSM can be used as a stand-alone model generation and display program and offers high-fidelity still image rendering. Models created in SSM can also be loaded into other software for animation or engineering simulation. (See the information below for the availability of SSM with the Object Orientation Manipulator program, OOM, a graphics software application for three-dimensional rendering and animation.) Models are constructed within SSM using functions of the Create Menu to create, combine, and manipulate basic geometric building blocks called primitives. Among the simpler primitives are boxes, spheres, ellipsoids, cylinders, and plates; among the more complex primitives are tubes, skinned-surface models and surfaces of revolution. SSM also provides several methods for duplicating models. Constructive Solid Geometry (CSG) is one of the most powerful model manipulation tools provided by SSM. The CSG operations implemented in SSM are union, subtraction and intersection. SSM allows the user to transform primitives with respect to each axis, transform the camera (the user's viewpoint) about its origin, apply texture maps and bump maps to model surfaces, and define color properties; to select and combine surface-fill attributes, including wireframe, constant, and smooth; and to specify models' points of origin (the positions about which they rotate). SSM uses Euler angle transformations for calculating the results of translation and rotation operations. The user has complete control over the modeling environment from within the system. A variety of file

  9. ONKALO rock mechanics model (RMM) - Version 2.0

    Energy Technology Data Exchange (ETDEWEB)

    Moenkkoenen, H. [WSP Finland Oy, Helsinki (Finland); Hakala, M. [KMS Hakala Oy, Nokia (Finland); Paananen, M.; Laine, E. [Geological Survey of Finland, Espoo (Finland)

    2012-02-15

    The Rock Mechanics Model of the ONKALO rock volume is a description of the significant features and parameters related to rock mechanics. The main objective is to develop a tool to predict the rock properties, quality and hence the potential for stress failure which can then be used for continuing design of the ONKALO and the repository. This is the second implementation of the Rock Mechanics Model and it includes sub-models of the intact rock strength, in situ stress, thermal properties, rock mass quality and properties of the brittle deformation zones. Because of the varying quantities of available data for the different parameters, the types of presentations also vary: some data sets can be presented in the style of a 3D block model but, in other cases, a single distribution represents the whole rock volume hosting the ONKALO. (orig.)

  10. The Oak Ridge Competitive Electricity Dispatch (ORCED) Model Version 9

    Energy Technology Data Exchange (ETDEWEB)

    Hadley, Stanton W. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Baek, Young Sun [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2016-11-01

    The Oak Ridge Competitive Electricity Dispatch (ORCED) model dispatches power plants in a region to meet the electricity demands for any single given year up to 2030. It uses publicly available sources of data describing electric power units such as the National Energy Modeling System and hourly demands from utility submittals to the Federal Energy Regulatory Commission that are projected to a future year. The model simulates a single region of the country for a given year, matching generation to demands and predefined net exports from the region, assuming no transmission constraints within the region. ORCED can calculate a number of key financial and operating parameters for generating units and regional market outputs including average and marginal prices, air emissions, and generation adequacy. By running the model with and without changes such as generation plants, fuel prices, emission costs, plug-in hybrid electric vehicles, distributed generation, or demand response, the marginal impact of these changes can be found.

  11. The Lagrangian particle dispersion model FLEXPART-WRF version 3.1

    Science.gov (United States)

    Brioude, J.; Arnold, D.; Stohl, A.; Cassiani, M.; Morton, D.; Seibert, P.; Angevine, W.; Evan, S.; Dingwell, A.; Fast, J. D.; Easter, R. C.; Pisso, I.; Burkhart, J.; Wotawa, G.

    2013-11-01

    The Lagrangian particle dispersion model FLEXPART was originally designed for calculating long-range and mesoscale dispersion of air pollutants from point sources, such that occurring after an accident in a nuclear power plant. In the meantime, FLEXPART has evolved into a comprehensive tool for atmospheric transport modeling and analysis at different scales. A need for further multiscale modeling and analysis has encouraged new developments in FLEXPART. In this paper, we present a FLEXPART version that works with the Weather Research and Forecasting (WRF) mesoscale meteorological model. We explain how to run this new model and present special options and features that differ from those of the preceding versions. For instance, a novel turbulence scheme for the convective boundary layer has been included that considers both the skewness of turbulence in the vertical velocity as well as the vertical gradient in the air density. To our knowledge, FLEXPART is the first model for which such a scheme has been developed. On a more technical level, FLEXPART-WRF now offers effective parallelization, and details on computational performance are presented here. FLEXPART-WRF output can either be in binary or Network Common Data Form (NetCDF) format, both of which have efficient data compression. In addition, test case data and the source code are provided to the reader as a Supplement. This material and future developments will be accessible at http://www.flexpart.eu.

  12. Technical Note: Chemistry-climate model SOCOL: version 2.0 with improved transport and chemistry/microphysics schemes

    Directory of Open Access Journals (Sweden)

    M. Schraner

    2008-10-01

    Full Text Available We describe version 2.0 of the chemistry-climate model (CCM SOCOL. The new version includes fundamental changes of the transport scheme such as transporting all chemical species of the model individually and applying a family-based correction scheme for mass conservation for species of the nitrogen, chlorine and bromine groups, a revised transport scheme for ozone, furthermore more detailed halogen reaction and deposition schemes, and a new cirrus parameterisation in the tropical tropopause region. By means of these changes the model manages to overcome or considerably reduce deficiencies recently identified in SOCOL version 1.1 within the CCM Validation activity of SPARC (CCMVal. In particular, as a consequence of these changes, regional mass loss or accumulation artificially caused by the semi-Lagrangian transport scheme can be significantly reduced, leading to much more realistic distributions of the modelled chemical species, most notably of the halogens and ozone.

  13. Circuit Modeling of a MEMS Varactor Including Dielectric Charging Dynamics

    Science.gov (United States)

    Giounanlis, P.; Andrade-Miceli, D.; Gorreta, S.; Pons-Nin, J.; Dominguez-Pumar, M.; Blokhina, E.

    2016-10-01

    Electrical models for MEMS varactors including the effect of dielectric charging dynamics are not available in commercial circuit simulators. In this paper a circuit model using lumped ideal elements available in the Cadence libraries and a basic Verilog-A model, has been implemented. The model has been used to simulate the dielectric charging in function of time and its effects over the MEMS capacitance value.

  14. Thermal site descriptive model. A strategy for the model development during site investigations - version 2

    Energy Technology Data Exchange (ETDEWEB)

    Back, Paer-Erik; Sundberg, Jan [Geo Innova AB (Sweden)

    2007-09-15

    This report presents a strategy for describing, predicting and visualising the thermal aspects of the site descriptive model. The strategy is an updated version of an earlier strategy applied in all SDM versions during the initial site investigation phase at the Forsmark and Oskarshamn areas. The previous methodology for thermal modelling did not take the spatial correlation fully into account during simulation. The result was that the variability of thermal conductivity in the rock mass was not sufficiently well described. Experience from earlier thermal SDMs indicated that development of the methodology was required in order describe the spatial distribution of thermal conductivity in the rock mass in a sufficiently reliable way, taking both variability within rock types and between rock types into account. A good description of the thermal conductivity distribution is especially important for the lower tail. This tail is important for the design of a repository because it affects the canister spacing. The presented approach is developed to be used for final SDM regarding thermal properties, primarily thermal conductivity. Specific objectives for the strategy of thermal stochastic modelling are: Description: statistical description of the thermal conductivity of a rock domain. Prediction: prediction of thermal conductivity in a specific rock volume. Visualisation: visualisation of the spatial distribution of thermal conductivity. The thermal site descriptive model should include the temperature distribution and thermal properties of the rock mass. The temperature is the result of the thermal processes in the repository area. Determination of thermal transport properties can be made using different methods, such as laboratory investigations, field measurements, modelling from mineralogical composition and distribution, modelling from density logging and modelling from temperature logging. The different types of data represent different scales, which has to be

  15. The NDFF-EcoGRID logical data model, version 3. - Document version 1.1

    NARCIS (Netherlands)

    W. Arp; G. van Reenen; R. van Seeters; M. Tentij; L.E. Veen; D. Zoetebier

    2011-01-01

    The National Authority for Data concerning Nature has been appointed by the Ministry of Agriculture, Nature and Food Quality, and has been assigned the task of making available nature data and of promoting its use. The logical data model described here is intended for everyone in The Netherlands (an

  16. Including investment risk in large-scale power market models

    DEFF Research Database (Denmark)

    Lemming, Jørgen Kjærgaard; Meibom, P.

    2003-01-01

    can be included in large-scale partial equilibrium models of the power market. The analyses are divided into a part about risk measures appropriate for power market investors and a more technical part about the combination of a risk-adjustment model and a partial-equilibrium model. To illustrate......Long-term energy market models can be used to examine investments in production technologies, however, with market liberalisation it is crucial that such models include investment risks and investor behaviour. This paper analyses how the effect of investment risk on production technology selection...... the analyses quantitatively, a framework based on an iterative interaction between the equilibrium model and a separate risk-adjustment module was constructed. To illustrate the features of the proposed modelling approach we examined how uncertainty in demand and variable costs affects the optimal choice...

  17. Global atmospheric model for mercury including oxidation by bromine atoms

    Directory of Open Access Journals (Sweden)

    C. D. Holmes

    2010-12-01

    Full Text Available Global models of atmospheric mercury generally assume that gas-phase OH and ozone are the main oxidants converting Hg0 to HgII and thus driving mercury deposition to ecosystems. However, thermodynamic considerations argue against the importance of these reactions. We demonstrate here the viability of atomic bromine (Br as an alternative Hg0 oxidant. We conduct a global 3-D simulation with the GEOS-Chem model assuming gas-phase Br to be the sole Hg0 oxidant (Hg + Br model and compare to the previous version of the model with OH and ozone as the sole oxidants (Hg + OH/O3 model. We specify global 3-D Br concentration fields based on our best understanding of tropospheric and stratospheric Br chemistry. In both the Hg + Br and Hg + OH/O3 models, we add an aqueous photochemical reduction of HgII in cloud to impose a tropospheric lifetime for mercury of 6.5 months against deposition, as needed to reconcile observed total gaseous mercury (TGM concentrations with current estimates of anthropogenic emissions. This added reduction would not be necessary in the Hg + Br model if we adjusted the Br oxidation kinetics downward within their range of uncertainty. We find that the Hg + Br and Hg + OH/O3 models are equally capable of reproducing the spatial distribution of TGM and its seasonal cycle at northern mid-latitudes. The Hg + Br model shows a steeper decline of TGM concentrations from the tropics to southern mid-latitudes. Only the Hg + Br model can reproduce the springtime depletion and summer rebound of TGM observed at polar sites; the snowpack component of GEOS-Chem suggests that 40% of HgII deposited to snow in the Arctic is transferred to the ocean and land reservoirs, amounting to a net deposition flux to the Arctic of 60 Mg a−1. Summertime events of depleted Hg0 at Antarctic sites due to subsidence are much better simulated by

  18. Institutional Transformation Version 2.5 Modeling and Planning.

    Energy Technology Data Exchange (ETDEWEB)

    Villa, Daniel [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Mizner, Jack H. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Passell, Howard D. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Gallegos, Gerald R. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Peplinski, William John [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Vetter, Douglas W. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Evans, Christopher A. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Malczynski, Leonard A. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Addison, Marlin [Arizona State Univ., Mesa, AZ (United States); Schaffer, Matthew A. [Bridgers and Paxton Engineering Firm, Albuquerque, NM (United States); Higgins, Matthew W. [Vibrantcy, Albuquerque, NM (United States)

    2017-02-01

    Reducing the resource consumption and emissions of large institutions is an important step toward a sustainable future. Sandia National Laboratories' (SNL) Institutional Transformation (IX) project vision is to provide tools that enable planners to make well-informed decisions concerning sustainability, resource conservation, and emissions reduction across multiple sectors. The building sector has been the primary focus so far because it is the largest consumer of resources for SNL. The IX building module allows users to define the evolution of many buildings over time. The module has been created so that it can be generally applied to any set of DOE-2 ( http://doe2.com ) building models that have been altered to include parameters and expressions required by energy conservation measures (ECM). Once building models have been appropriately prepared, they are checked into a Microsoft Access (r) database. Each building can be represented by many models. This enables the capability to keep a continuous record of models in the past, which are replaced with different models as changes occur to the building. In addition to this, the building module has the capability to apply climate scenarios through applying different weather files to each simulation year. Once the database has been configured, a user interface in Microsoft Excel (r) is used to create scenarios with one or more ECMs. The capability to include central utility buildings (CUBs) that service more than one building with chilled water has been developed. A utility has been created that joins multiple building models into a single model. After using the utility, several manual steps are required to complete the process. Once this CUB model has been created, the individual contributions of each building are still tracked through meters. Currently, 120 building models from SNL's New Mexico and California campuses have been created. This includes all buildings at SNL greater than 10,000 sq. ft

  19. Global atmospheric model for mercury including oxidation by bromine atoms

    Directory of Open Access Journals (Sweden)

    C. D. Holmes

    2010-08-01

    Full Text Available Global models of atmospheric mercury generally assume that OH and ozone are the main oxidants converting Hg0 to HgII and thus driving mercury deposition to ecosystems. However, thermodynamic considerations argue against the importance of these reactions. We demonstrate here the viability of atomic bromine (Br as an alternative Hg0 oxidant. We conduct a global 3-D simulation with the GEOS-Chem model assuming Br to be the sole Hg0 oxidant (Hg + Br model and compare to the previous version of the model with OH and ozone as the sole oxidants (Hg + OH/O3 model. We specify global 3-D Br concentration fields based on our best understanding of tropospheric and stratospheric Br chemistry. In both the Hg + Br and Hg + OH/O3 models, we add an aqueous photochemical reduction of HgII in cloud to impose a tropospheric lifetime for mercury of 6.5 months against deposition, as needed to reconcile observed total gaseous mercury (TGM concentrations with current estimates of anthropogenic emissions. This added reduction would not be necessary in the Hg + Br model if we adjusted the Br oxidation kinetics downward within their range of uncertainty. We find that the Hg + Br and Hg + OH/O3 models are equally capable of reproducing the spatial distribution of TGM and its seasonal cycle at northern mid-latitudes. The Hg + Br model shows a steeper decline of TGM concentrations from the tropics to southern mid-latitudes. Only the Hg + Br model can reproduce the springtime depletion and summer rebound of TGM observed at polar sites; the snowpack component of GEOS-Chem suggests that 40% of HgII deposited to snow in the Arctic is transferred to the ocean and land reservoirs, amounting to a net deposition flux of 60 Mg a−1. Summertime events of depleted Hg0 at Antarctic sites due to subsidence are much better simulated by the Hg + Br model. Model

  20. The Lagrangian particle dispersion model FLEXPART-WRF version 3.0

    Directory of Open Access Journals (Sweden)

    J. Brioude

    2013-07-01

    Full Text Available The Lagrangian particle dispersion model FLEXPART was originally designed for calculating long-range and mesoscale dispersion of air pollutants from point sources, such as after an accident in a nuclear power plant. In the meantime FLEXPART has evolved into a comprehensive tool for atmospheric transport modeling and analysis at different scales. This multiscale need has encouraged new developments in FLEXPART. In this document, we present a FLEXPART version that works with the Weather Research and Forecasting (WRF mesoscale meteorological model. We explain how to run and present special options and features that differ from its predecessor versions. For instance, a novel turbulence scheme for the convective boundary layer has been included that considers both the skewness of turbulence in the vertical velocity as well as the vertical gradient in the air density. To our knowledge, FLEXPART is the first model for which such a scheme has been developed. On a more technical level, FLEXPART-WRF now offers effective parallelization and details on computational performance are presented here. FLEXPART-WRF output can either be in binary or Network Common Data Form (NetCDF format with efficient data compression. In addition, test case data and the source code are provided to the reader as Supplement. This material and future developments will be accessible at http://www.flexpart.eu.

  1. The Lagrangian particle dispersion model FLEXPART-WRF version 3.0

    Science.gov (United States)

    Brioude, J.; Arnold, D.; Stohl, A.; Cassiani, M.; Morton, D.; Seibert, P.; Angevine, W.; Evan, S.; Dingwell, A.; Fast, J. D.; Easter, R. C.; Pisso, I.; Burkhart, J.; Wotawa, G.

    2013-07-01

    The Lagrangian particle dispersion model FLEXPART was originally designed for calculating long-range and mesoscale dispersion of air pollutants from point sources, such as after an accident in a nuclear power plant. In the meantime FLEXPART has evolved into a comprehensive tool for atmospheric transport modeling and analysis at different scales. This multiscale need has encouraged new developments in FLEXPART. In this document, we present a FLEXPART version that works with the Weather Research and Forecasting (WRF) mesoscale meteorological model. We explain how to run and present special options and features that differ from its predecessor versions. For instance, a novel turbulence scheme for the convective boundary layer has been included that considers both the skewness of turbulence in the vertical velocity as well as the vertical gradient in the air density. To our knowledge, FLEXPART is the first model for which such a scheme has been developed. On a more technical level, FLEXPART-WRF now offers effective parallelization and details on computational performance are presented here. FLEXPART-WRF output can either be in binary or Network Common Data Form (NetCDF) format with efficient data compression. In addition, test case data and the source code are provided to the reader as Supplement. This material and future developments will be accessible at http://www.flexpart.eu.

  2. Red Storm usage model :Version 1.12.

    Energy Technology Data Exchange (ETDEWEB)

    Jefferson, Karen L.; Sturtevant, Judith E.

    2005-12-01

    Red Storm is an Advanced Simulation and Computing (ASC) funded massively parallel supercomputer located at Sandia National Laboratories (SNL). The Red Storm Usage Model (RSUM) documents the capabilities and the environment provided for the FY05 Tri-Lab Level II Limited Availability Red Storm User Environment Milestone and the FY05 SNL Level II Limited Availability Red Storm Platform Milestone. This document describes specific capabilities, tools, and procedures to support both local and remote users. The model is focused on the needs of the ASC user working in the secure computing environments at Los Alamos National Laboratory (LANL), Lawrence Livermore National Laboratory (LLNL), and SNL. Additionally, the Red Storm Usage Model maps the provided capabilities to the Tri-Lab ASC Computing Environment (ACE) requirements. The ACE requirements reflect the high performance computing requirements for the ASC community and have been updated in FY05 to reflect the community's needs. For each section of the RSUM, Appendix I maps the ACE requirements to the Limited Availability User Environment capabilities and includes a description of ACE requirements met and those requirements that are not met in that particular section. The Red Storm Usage Model, along with the ACE mappings, has been issued and vetted throughout the Tri-Lab community.

  3. Igpet software for modeling igneous processes: examples of application using the open educational version

    Science.gov (United States)

    Carr, Michael J.; Gazel, Esteban

    2016-09-01

    We provide here an open version of Igpet software, called t-Igpet to emphasize its application for teaching and research in forward modeling of igneous geochemistry. There are three programs, a norm utility, a petrologic mixing program using least squares and Igpet, a graphics program that includes many forms of numerical modeling. Igpet is a multifaceted tool that provides the following basic capabilities: igneous rock identification using the IUGS (International Union of Geological Sciences) classification and several supplementary diagrams; tectonic discrimination diagrams; pseudo-quaternary projections; least squares fitting of lines, polynomials and hyperbolae; magma mixing using two endmembers, histograms, x-y plots, ternary plots and spider-diagrams. The advanced capabilities of Igpet are multi-element mixing and magma evolution modeling. Mixing models are particularly useful for understanding the isotopic variations in rock suites that evolved by mixing different sources. The important melting models include, batch melting, fractional melting and aggregated fractional melting. Crystallization models include equilibrium and fractional crystallization and AFC (assimilation and fractional crystallization). Theses, reports and proposals concerning igneous petrology are improved by numerical modeling. For reviewed publications some elements of modeling are practically a requirement. Our intention in providing this software is to facilitate improved communication and lower entry barriers to research, especially for students.

  4. Igpet software for modeling igneous processes: examples of application using the open educational version

    Science.gov (United States)

    Carr, Michael J.; Gazel, Esteban

    2017-04-01

    We provide here an open version of Igpet software, called t-Igpet to emphasize its application for teaching and research in forward modeling of igneous geochemistry. There are three programs, a norm utility, a petrologic mixing program using least squares and Igpet, a graphics program that includes many forms of numerical modeling. Igpet is a multifaceted tool that provides the following basic capabilities: igneous rock identification using the IUGS (International Union of Geological Sciences) classification and several supplementary diagrams; tectonic discrimination diagrams; pseudo-quaternary projections; least squares fitting of lines, polynomials and hyperbolae; magma mixing using two endmembers, histograms, x-y plots, ternary plots and spider-diagrams. The advanced capabilities of Igpet are multi-element mixing and magma evolution modeling. Mixing models are particularly useful for understanding the isotopic variations in rock suites that evolved by mixing different sources. The important melting models include, batch melting, fractional melting and aggregated fractional melting. Crystallization models include equilibrium and fractional crystallization and AFC (assimilation and fractional crystallization). Theses, reports and proposals concerning igneous petrology are improved by numerical modeling. For reviewed publications some elements of modeling are practically a requirement. Our intention in providing this software is to facilitate improved communication and lower entry barriers to research, especially for students.

  5. Progressive IRP Models for Power Resources Including EPP

    Directory of Open Access Journals (Sweden)

    Yiping Zhu

    2017-01-01

    Full Text Available In the view of optimizing regional power supply and demand, the paper makes effective planning scheduling of supply and demand side resources including energy efficiency power plant (EPP, to achieve the target of benefit, cost, and environmental constraints. In order to highlight the characteristics of different supply and demand resources in economic, environmental, and carbon constraints, three planning models with progressive constraints are constructed. Results of three models by the same example show that the best solutions to different models are different. The planning model including EPP has obvious advantages considering pollutant and carbon emission constraints, which confirms the advantages of low cost and emissions of EPP. The construction of progressive IRP models for power resources considering EPP has a certain reference value for guiding the planning and layout of EPP within other power resources and achieving cost and environmental objectives.

  6. Modeling heart rate variability including the effect of sleep stages

    Science.gov (United States)

    Soliński, Mateusz; Gierałtowski, Jan; Żebrowski, Jan

    2016-02-01

    We propose a model for heart rate variability (HRV) of a healthy individual during sleep with the assumption that the heart rate variability is predominantly a random process. Autonomic nervous system activity has different properties during different sleep stages, and this affects many physiological systems including the cardiovascular system. Different properties of HRV can be observed during each particular sleep stage. We believe that taking into account the sleep architecture is crucial for modeling the human nighttime HRV. The stochastic model of HRV introduced by Kantelhardt et al. was used as the initial starting point. We studied the statistical properties of sleep in healthy adults, analyzing 30 polysomnographic recordings, which provided realistic information about sleep architecture. Next, we generated synthetic hypnograms and included them in the modeling of nighttime RR interval series. The results of standard HRV linear analysis and of nonlinear analysis (Shannon entropy, Poincaré plots, and multiscale multifractal analysis) show that—in comparison with real data—the HRV signals obtained from our model have very similar properties, in particular including the multifractal characteristics at different time scales. The model described in this paper is discussed in the context of normal sleep. However, its construction is such that it should allow to model heart rate variability in sleep disorders. This possibility is briefly discussed.

  7. Update of the Polar SWIFT model for polar stratospheric ozone loss (Polar SWIFT version 2)

    Science.gov (United States)

    Wohltmann, Ingo; Lehmann, Ralph; Rex, Markus

    2017-07-01

    The Polar SWIFT model is a fast scheme for calculating the chemistry of stratospheric ozone depletion in polar winter. It is intended for use in global climate models (GCMs) and Earth system models (ESMs) to enable the simulation of mutual interactions between the ozone layer and climate. To date, climate models often use prescribed ozone fields, since a full stratospheric chemistry scheme is computationally very expensive. Polar SWIFT is based on a set of coupled differential equations, which simulate the polar vortex-averaged mixing ratios of the key species involved in polar ozone depletion on a given vertical level. These species are O3, chemically active chlorine (ClOx), HCl, ClONO2 and HNO3. The only external input parameters that drive the model are the fraction of the polar vortex in sunlight and the fraction of the polar vortex below the temperatures necessary for the formation of polar stratospheric clouds. Here, we present an update of the Polar SWIFT model introducing several improvements over the original model formulation. In particular, the model is now trained on vortex-averaged reaction rates of the ATLAS Chemistry and Transport Model, which enables a detailed look at individual processes and an independent validation of the different parameterizations contained in the differential equations. The training of the original Polar SWIFT model was based on fitting complete model runs to satellite observations and did not allow for this. A revised formulation of the system of differential equations is developed, which closely fits vortex-averaged reaction rates from ATLAS that represent the main chemical processes influencing ozone. In addition, a parameterization for the HNO3 change by denitrification is included. The rates of change of the concentrations of the chemical species of the Polar SWIFT model are purely chemical rates of change in the new version, whereas in the original Polar SWIFT model, they included a transport effect caused by the

  8. A hydrodynamic model for granular material flows including segregation effects

    Science.gov (United States)

    Gilberg, Dominik; Klar, Axel; Steiner, Konrad

    2017-06-01

    The simulation of granular flows including segregation effects in large industrial processes using particle methods is accurate, but very time-consuming. To overcome the long computation times a macroscopic model is a natural choice. Therefore, we couple a mixture theory based segregation model to a hydrodynamic model of Navier-Stokes-type, describing the flow behavior of the granular material. The granular flow model is a hybrid model derived from kinetic theory and a soil mechanical approach to cover the regime of fast dilute flow, as well as slow dense flow, where the density of the granular material is close to the maximum packing density. Originally, the segregation model has been formulated by Thornton and Gray for idealized avalanches. It is modified and adapted to be in the preferred form for the coupling. In the final coupled model the segregation process depends on the local state of the granular system. On the other hand, the granular system changes as differently mixed regions of the granular material differ i.e. in the packing density. For the modeling process the focus lies on dry granular material flows of two particle types differing only in size but can be easily extended to arbitrary granular mixtures of different particle size and density. To solve the coupled system a finite volume approach is used. To test the model the rotational mixing of small and large particles in a tumbler is simulated.

  9. Synaptic channel model including effects of spike width variation

    OpenAIRE

    2015-01-01

    Synaptic Channel Model Including Effects of Spike Width Variation Hamideh Ramezani Next-generation and Wireless Communications Laboratory (NWCL) Department of Electrical and Electronics Engineering Koc University, Istanbul, Turkey Ozgur B. Akan Next-generation and Wireless Communications Laboratory (NWCL) Department of Electrical and Electronics Engineering Koc University, Istanbul, Turkey ABSTRACT An accu...

  10. Estimating Parameters for the PVsyst Version 6 Photovoltaic Module Performance Model

    Energy Technology Data Exchange (ETDEWEB)

    Hansen, Clifford [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States)

    2015-10-01

    We present an algorithm to determine parameters for the photovoltaic module perf ormance model encoded in the software package PVsyst(TM) version 6. Our method operates on current - voltage (I - V) measured over a range of irradiance and temperature conditions. We describe the method and illustrate its steps using data for a 36 cell crystalli ne silicon module. We qualitatively compare our method with one other technique for estimating parameters for the PVsyst(TM) version 6 model .

  11. A sonic boom propagation model including mean flow atmospheric effects

    Science.gov (United States)

    Salamone, Joe; Sparrow, Victor W.

    2012-09-01

    This paper presents a time domain formulation of nonlinear lossy propagation in onedimension that also includes the effects of non-collinear mean flow in the acoustic medium. The model equation utilized is an augmented Burgers equation that includes the effects of nonlinearity, geometric spreading, atmospheric stratification, and also absorption and dispersion due to thermoviscous and molecular relaxation effects. All elements of the propagation are implemented in the time domain and the effects of non-collinear mean flow are accounted for in each term of the model equation. Previous authors have presented methods limited to showing the effects of wind on ray tracing and/or using an effective speed of sound in their model equation. The present work includes the effects of mean flow for all terms included in the augmented Burgers equation with all of the calculations performed in the time-domain. The capability to include the effects of mean flow in the acoustic medium allows one to make predictions more representative of real-world atmospheric conditions. Examples are presented for nonlinear propagation of N-waves and shaped sonic booms. [Work supported by Gulfstream Aerospace Corporation.

  12. psychotools - Infrastructure for Psychometric Modeling: Version 0.1-1

    OpenAIRE

    Zeileis, A.; Strobl, Carolin; Wickelmaier, F

    2011-01-01

    Infrastructure for psychometric modeling such as data classes (e.g., for paired comparisons) and basic model fitting functions (e.g., for Rasch and Bradley-Terry models). Intended especially as a common building block for fitting psychometric mixture models in package ‘‘psychomix’’ and psychometric tree models in package ‘‘psychotree’’. License: GPL-2

  13. Implementing an HL7 version 3 modeling tool from an Ecore model.

    Science.gov (United States)

    Bánfai, Balázs; Ulrich, Brandon; Török, Zsolt; Natarajan, Ravi; Ireland, Tim

    2009-01-01

    One of the main challenges of achieving interoperability using the HL7 V3 healthcare standard is the lack of clear definition and supporting tools for modeling, testing, and conformance checking. Currently, the knowledge defining the modeling is scattered around in MIF schemas, tools and specifications or simply with the domain experts. Modeling core HL7 concepts, constraints, and semantic relationships in Ecore/EMF encapsulates the domain-specific knowledge in a transparent way while unifying Java, XML, and UML in an abstract, high-level representation. Moreover, persisting and versioning the core HL7 concepts as a single Ecore context allows modelers and implementers to create, edit and validate message models against a single modeling context. The solution discussed in this paper is implemented in the new HL7 Static Model Designer as an extensible toolset integrated as a standalone Eclipse RCP application.

  14. Thermal site descriptive model. A strategy for the model development during site investigations - version 2

    Energy Technology Data Exchange (ETDEWEB)

    Back, Paer-Erik; Sundberg, Jan [Geo Innova AB (Sweden)

    2007-09-15

    This report presents a strategy for describing, predicting and visualising the thermal aspects of the site descriptive model. The strategy is an updated version of an earlier strategy applied in all SDM versions during the initial site investigation phase at the Forsmark and Oskarshamn areas. The previous methodology for thermal modelling did not take the spatial correlation fully into account during simulation. The result was that the variability of thermal conductivity in the rock mass was not sufficiently well described. Experience from earlier thermal SDMs indicated that development of the methodology was required in order describe the spatial distribution of thermal conductivity in the rock mass in a sufficiently reliable way, taking both variability within rock types and between rock types into account. A good description of the thermal conductivity distribution is especially important for the lower tail. This tail is important for the design of a repository because it affects the canister spacing. The presented approach is developed to be used for final SDM regarding thermal properties, primarily thermal conductivity. Specific objectives for the strategy of thermal stochastic modelling are: Description: statistical description of the thermal conductivity of a rock domain. Prediction: prediction of thermal conductivity in a specific rock volume. Visualisation: visualisation of the spatial distribution of thermal conductivity. The thermal site descriptive model should include the temperature distribution and thermal properties of the rock mass. The temperature is the result of the thermal processes in the repository area. Determination of thermal transport properties can be made using different methods, such as laboratory investigations, field measurements, modelling from mineralogical composition and distribution, modelling from density logging and modelling from temperature logging. The different types of data represent different scales, which has to be

  15. Fusion rules for the logarithmic $N=1$ superconformal minimal models II: including the Ramond sector

    CERN Document Server

    Canagasabey, Michael

    2015-01-01

    The Virasoro logarithmic minimal models were intensively studied by several groups over the last ten years with much attention paid to the fusion rules and the structures of the indecomposable representations that fusion generates. The analogous study of the fusion rules of the $N=1$ superconformal logarithmic minimal models was initiated in arXiv:1504.03155 as a continuum counterpart to the lattice explorations of arXiv:1312.6763. These works restricted fusion considerations to Neveu-Schwarz representations. Here, this is extended to include the Ramond sector. Technical advances that make this possible include a fermionic Verlinde formula applicable to logarithmic conformal field theories and a twisted version of the fusion algorithm of Nahm and Gaberdiel-Kausch. The results include the first construction and detailed analysis of logarithmic structures in the Ramond sector.

  16. User guide for MODPATH version 6 - A particle-tracking model for MODFLOW

    Science.gov (United States)

    Pollock, David W.

    2012-01-01

    MODPATH is a particle-tracking post-processing model that computes three-dimensional flow paths using output from groundwater flow simulations based on MODFLOW, the U.S. Geological Survey (USGS) finite-difference groundwater flow model. This report documents MODPATH version 6. Previous versions were documented in USGS Open-File Reports 89-381 and 94-464. The program uses a semianalytical particle-tracking scheme that allows an analytical expression of a particle's flow path to be obtained within each finite-difference grid cell. A particle's path is computed by tracking the particle from one cell to the next until it reaches a boundary, an internal sink/source, or satisfies another termination criterion. Data input to MODPATH consists of a combination of MODFLOW input data files, MODFLOW head and flow output files, and other input files specific to MODPATH. Output from MODPATH consists of several output files, including a number of particle coordinate output files intended to serve as input data for other programs that process, analyze, and display the results in various ways. MODPATH is written in FORTRAN and can be compiled by any FORTRAN compiler that fully supports FORTRAN-2003 or by most commercially available FORTRAN-95 compilers that support the major FORTRAN-2003 language extensions.

  17. LERC-SLAM - THE NASA LEWIS RESEARCH CENTER SATELLITE LINK ATTENUATION MODEL PROGRAM (IBM PC VERSION)

    Science.gov (United States)

    Manning, R. M.

    1994-01-01

    The frequency and intensity of rain attenuation affecting the communication between a satellite and an earth terminal is an important consideration in planning satellite links. The NASA Lewis Research Center Satellite Link Attenuation Model Program (LeRC-SLAM) provides a static and dynamic statistical assessment of the impact of rain attenuation on a communications link established between an earth terminal and a geosynchronous satellite. The program is designed for use in the specification, design and assessment of satellite links for any terminal location in the continental United States. The basis for LeRC-SLAM is the ACTS Rain Attenuation Prediction Model, which uses a log-normal cumulative probability distribution to describe the random process of rain attenuation on satellite links. The derivation of the statistics for the rainrate process at the specified terminal location relies on long term rainfall records compiled by the U.S. Weather Service during time periods of up to 55 years in length. The theory of extreme value statistics is also utilized. The user provides 1) the longitudinal position of the satellite in geosynchronous orbit, 2) the geographical position of the earth terminal in terms of latitude and longitude, 3) the height above sea level of the terminal site, 4) the yearly average rainfall at the terminal site, and 5) the operating frequency of the communications link (within 1 to 1000 GHz, inclusive). Based on the yearly average rainfall at the terminal location, LeRC-SLAM calculates the relevant rain statistics for the site using an internal data base. The program then generates rain attenuation data for the satellite link. This data includes a description of the static (i.e., yearly) attenuation process, an evaluation of the cumulative probability distribution for attenuation effects, and an evaluation of the probability of fades below selected fade depths. In addition, LeRC-SLAM calculates the elevation and azimuth angles of the terminal

  18. LERC-SLAM - THE NASA LEWIS RESEARCH CENTER SATELLITE LINK ATTENUATION MODEL PROGRAM (MACINTOSH VERSION)

    Science.gov (United States)

    Manning, R. M.

    1994-01-01

    The frequency and intensity of rain attenuation affecting the communication between a satellite and an earth terminal is an important consideration in planning satellite links. The NASA Lewis Research Center Satellite Link Attenuation Model Program (LeRC-SLAM) provides a static and dynamic statistical assessment of the impact of rain attenuation on a communications link established between an earth terminal and a geosynchronous satellite. The program is designed for use in the specification, design and assessment of satellite links for any terminal location in the continental United States. The basis for LeRC-SLAM is the ACTS Rain Attenuation Prediction Model, which uses a log-normal cumulative probability distribution to describe the random process of rain attenuation on satellite links. The derivation of the statistics for the rainrate process at the specified terminal location relies on long term rainfall records compiled by the U.S. Weather Service during time periods of up to 55 years in length. The theory of extreme value statistics is also utilized. The user provides 1) the longitudinal position of the satellite in geosynchronous orbit, 2) the geographical position of the earth terminal in terms of latitude and longitude, 3) the height above sea level of the terminal site, 4) the yearly average rainfall at the terminal site, and 5) the operating frequency of the communications link (within 1 to 1000 GHz, inclusive). Based on the yearly average rainfall at the terminal location, LeRC-SLAM calculates the relevant rain statistics for the site using an internal data base. The program then generates rain attenuation data for the satellite link. This data includes a description of the static (i.e., yearly) attenuation process, an evaluation of the cumulative probability distribution for attenuation effects, and an evaluation of the probability of fades below selected fade depths. In addition, LeRC-SLAM calculates the elevation and azimuth angles of the terminal

  19. New Source Term Model for the RESRAD-OFFSITE Code Version 3

    Energy Technology Data Exchange (ETDEWEB)

    Yu, Charley [Argonne National Lab. (ANL), Argonne, IL (United States); Gnanapragasam, Emmanuel [Argonne National Lab. (ANL), Argonne, IL (United States); Cheng, Jing-Jy [Argonne National Lab. (ANL), Argonne, IL (United States); Kamboj, Sunita [Argonne National Lab. (ANL), Argonne, IL (United States); Chen, Shih-Yew [Argonne National Lab. (ANL), Argonne, IL (United States)

    2013-06-01

    This report documents the new source term model developed and implemented in Version 3 of the RESRAD-OFFSITE code. This new source term model includes: (1) "first order release with transport" option, in which the release of the radionuclide is proportional to the inventory in the primary contamination and the user-specified leach rate is the proportionality constant, (2) "equilibrium desorption release" option, in which the user specifies the distribution coefficient which quantifies the partitioning of the radionuclide between the solid and aqueous phases, and (3) "uniform release" option, in which the radionuclides are released from a constant fraction of the initially contaminated material during each time interval and the user specifies the duration over which the radionuclides are released.

  20. Calibrating and Updating the Global Forest Products Model (GFPM version 2014 with BPMPD)

    Science.gov (United States)

    Joseph Buongiorno; Shushuai Zhu

    2014-01-01

    The Global Forest Products Model (GFPM) is an economic model of global production, consumption, and trade of forest products. An earlier version of the model is described in Buongiorno et al. (2003). The GFPM 2014 has data and parameters to simulate changes of the forest sector from 2010 to 2030. Buongiorno and Zhu (2014) describe how to use the model for simulation....

  1. Calibrating and updating the Global Forest Products Model (GFPM version 2016 with BPMPD)

    Science.gov (United States)

    Joseph Buongiorno; Shushuai  Zhu

    2016-01-01

    The Global Forest Products Model (GFPM) is an economic model of global production, consumption, and trade of forest products. An earlier version of the model is described in Buongiorno et al. (2003). The GFPM 2016 has data and parameters to simulate changes of the forest sector from 2013 to 2030. Buongiorno and Zhu (2015) describe how to use the model for...

  2. SPheno 3.1: extensions including flavour, CP-phases and models beyond the MSSM

    Science.gov (United States)

    Porod, W.; Staub, F.

    2012-11-01

    We describe recent extensions of the program SPhenoincluding flavour aspects, CP-phases, R-parity violation and low energy observables. In case of flavour mixing all masses of supersymmetric particles are calculated including the complete flavour structure and all possible CP-phases at the 1-loop level. We give details on implemented seesaw models, low energy observables and the corresponding extension of the SUSY Les Houches Accord. Moreover, we comment on the possibilities to include MSSM extensions in SPheno. Catalogue identifier: ADRV_v2_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/ADRV_v2_0.html Program obtainable from: CPC Program Library, Queen’s University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 154062 No. of bytes in distributed program, including test data, etc.: 1336037 Distribution format: tar.gz Programming language: Fortran95. Computer: PC running under Linux, should run in every Unix environment. Operating system: Linux, Unix. Classification: 11.6. Catalogue identifier of previous version: ADRV_v1_0 Journal reference of previous version: Comput. Phys. Comm. 153(2003)275 Does the new version supersede the previous version?: Yes Nature of problem: The first issue is the determination of the masses and couplings of supersymmetric particles in various supersymmetric models, the R-parity conserved MSSM with generation mixing and including CP-violating phases, various seesaw extensions of the MSSM and the MSSM with bilinear R-parity breaking. Low energy data on Standard Model fermion masses, gauge couplings and electroweak gauge boson masses serve as constraints. Radiative corrections from supersymmetric particles to these inputs must be calculated. Theoretical constraints on the soft SUSY breaking parameters from a high scale theory are imposed and the parameters at the electroweak scale are obtained from the

  3. Aircraft/Air Traffic Management Functional Analysis Model. Version 2.0; User's Guide

    Science.gov (United States)

    Etheridge, Melvin; Plugge, Joana; Retina, Nusrat

    1998-01-01

    The Aircraft/Air Traffic Management Functional Analysis Model, Version 2.0 (FAM 2.0), is a discrete event simulation model designed to support analysis of alternative concepts in air traffic management and control. FAM 2.0 was developed by the Logistics Management Institute (LMI) a National Aeronautics and Space Administration (NASA) contract. This document provides a guide for using the model in analysis. Those interested in making enhancements or modification to the model should consult the companion document, Aircraft/Air Traffic Management Functional Analysis Model, Version 2.0 Technical Description.

  4. Description of the Earth system model of intermediate complexity LOVECLIM version 1.2

    Directory of Open Access Journals (Sweden)

    H. Goosse

    2010-11-01

    Full Text Available The main characteristics of the new version 1.2 of the three-dimensional Earth system model of intermediate complexity LOVECLIM are briefly described. LOVECLIM 1.2 includes representations of the atmosphere, the ocean and sea ice, the land surface (including vegetation, the ice sheets, the icebergs and the carbon cycle. The atmospheric component is ECBilt2, a T21, 3-level quasi-geostrophic model. The ocean component is CLIO3, which consists of an ocean general circulation model coupled to a comprehensive thermodynamic-dynamic sea-ice model. Its horizontal resolution is of 3° by 3°, and there are 20 levels in the ocean. ECBilt-CLIO is coupled to VECODE, a vegetation model that simulates the dynamics of two main terrestrial plant functional types, trees and grasses, as well as desert. VECODE also simulates the evolution of the carbon cycle over land while the ocean carbon cycle is represented by LOCH, a comprehensive model that takes into account both the solubility and biological pumps. The ice sheet component AGISM is made up of a three-dimensional thermomechanical model of the ice sheet flow, a visco-elastic bedrock model and a model of the mass balance at the ice-atmosphere and ice-ocean interfaces. For both the Greenland and Antarctic ice sheets, calculations are made on a 10 km by 10 km resolution grid with 31 sigma levels. LOVECLIM1.2 reproduces well the major characteristics of the observed climate both for present-day conditions and for key past periods such as the last millennium, the mid-Holocene and the Last Glacial Maximum. However, despite some improvements compared to earlier versions, some biases are still present in the model. The most serious ones are mainly located at low latitudes with an overestimation of the temperature there, a too symmetric distribution of precipitation between the two hemispheres, and an overestimation of precipitation and vegetation cover in the subtropics. In addition, the atmospheric circulation is

  5. A model of Barchan dunes including lateral shear stress.

    Science.gov (United States)

    Schwämmle, V; Herrmann, H J

    2005-01-01

    Barchan dunes are found where sand availability is low and wind direction quite constant. The two dimensional shear stress of the wind field and the sand movement by saltation and avalanches over a barchan dune are simulated. The model with one dimensional shear stress is extended including surface diffusion and lateral shear stress. The resulting final shape is compared to the results of the model with a one dimensional shear stress and confirmed by comparison to measurements. We found agreement and improvements with respect to the model with one dimensional shear stress. Additionally, a characteristic edge at the center of the windward side is discovered which is also observed for big barchans. Diffusion effects reduce this effect for small dunes.

  6. Modelling and analysis of Markov reward automata (extended version)

    NARCIS (Netherlands)

    Guck, Dennis; Timmer, Mark; Hatefi, Hassan; Ruijters, Enno; Stoelinga, Mariëlle

    2014-01-01

    Costs and rewards are important ingredients for cyberphysical systems, modelling critical aspects like energy consumption, task completion, repair costs, and memory usage. This paper introduces Markov reward automata, an extension of Markov automata that allows the modelling of systems incorporating

  7. Evaluation of the Snow Simulations from the Community Land Model, Version 4 (CLM4)

    Science.gov (United States)

    Toure, Ally M.; Rodell, Matthew; Yang, Zong-Liang; Beaudoing, Hiroko; Kim, Edward; Zhang, Yongfei; Kwon, Yonghwan

    2015-01-01

    This paper evaluates the simulation of snow by the Community Land Model, version 4 (CLM4), the land model component of the Community Earth System Model, version 1.0.4 (CESM1.0.4). CLM4 was run in an offline mode forced with the corrected land-only replay of the Modern-Era Retrospective Analysis for Research and Applications (MERRA-Land) and the output was evaluated for the period from January 2001 to January 2011 over the Northern Hemisphere poleward of 30 deg N. Simulated snow-cover fraction (SCF), snow depth, and snow water equivalent (SWE) were compared against a set of observations including the Moderate Resolution Imaging Spectroradiometer (MODIS) SCF, the Interactive Multisensor Snow and Ice Mapping System (IMS) snow cover, the Canadian Meteorological Centre (CMC) daily snow analysis products, snow depth from the National Weather Service Cooperative Observer (COOP) program, and Snowpack Telemetry (SNOTEL) SWE observations. CLM4 SCF was converted into snow-cover extent (SCE) to compare with MODIS SCE. It showed good agreement, with a correlation coefficient of 0.91 and an average bias of -1.54 x 10(exp 2) sq km. Overall, CLM4 agreed well with IMS snow cover, with the percentage of correctly modeled snow-no snow being 94%. CLM4 snow depth and SWE agreed reasonably well with the CMC product, with the average bias (RMSE) of snow depth and SWE being 0.044m (0.19 m) and -0.010m (0.04 m), respectively. CLM4 underestimated SNOTEL SWE and COOP snow depth. This study demonstrates the need to improve the CLM4 snow estimates and constitutes a benchmark against which improvement of the model through data assimilation can be measured.

  8. Ocean Model, Analysis and Prediction System version 3: operational global ocean forecasting

    Science.gov (United States)

    Brassington, Gary; Sandery, Paul; Sakov, Pavel; Freeman, Justin; Divakaran, Prasanth; Beckett, Duan

    2017-04-01

    The Ocean Model, Analysis and Prediction System version 3 (OceanMAPSv3) is a near-global (75S-75N; no sea-ice), uniform horizontal resolution (0.1°x0.1°), 51 vertical level ocean forecast system producing daily analyses and 7 day forecasts. This system was declared operational at the Bureau of Meteorology in April 2016 and subsequently upgraded to include ACCESS-G APS2 in June 2016 and finally ported to the Bureau's new supercomputer in Sep 2016. This system realises the original vision of the BLUElink projects (2003-2015) to provide global forecasts of the ocean geostrophic turbulence (eddies and fronts) in support of Naval operations as well as other national services. The analysis system has retained an ensemble-based optimal interpolation method with 144 stationary ensemble members derived from a multi-year hindcast. However, the BODAS code has been upgraded to a new code base ENKF-C. A new strategy for initialisation has been introduced leading to greater retention of analysis increments and reduced shock. The analysis cycle has been optimised for a 3-cycle system with 3 day observation windows retaining an advantage as a multi-cycle time-lagged ensemble. The sea surface temperature and sea surface height anomaly analysis errors in the Australian region are 0.34 degC and 6.2 cm respectively an improvement of 10% and 20% respectively over version 2. In addition, the RMSE of the 7 day forecast has lower error than the 1 day forecast from the previous system (version 2). International intercomparisons have shown that this system is comparable in performance with the two leading systems and is often the leading performer for surface temperature and upper ocean temperature. We present an overview of the system, the data assimilation and initialisation, demonstrate the performance and outline future directions.

  9. A hypocentral version of the space-time ETAS model

    Science.gov (United States)

    Guo, Yicun; Zhuang, Jiancang; Zhou, Shiyong

    2015-10-01

    The space-time Epidemic-Type Aftershock Sequence (ETAS) model is extended by incorporating the depth component of earthquake hypocentres. The depths of the direct offspring produced by an earthquake are assumed to be independent of the epicentre locations and to follow a beta distribution, whose shape parameter is determined by the depth of the parent event. This new model is verified by applying it to the Southern California earthquake catalogue. The results show that the new model fits data better than the original epicentre ETAS model and that it provides the potential for modelling and forecasting seismicity with higher resolutions.

  10. An improved version of the consequence analysis model for chemical emergencies, ESCAPE

    Science.gov (United States)

    Kukkonen, J.; Nikmo, J.; Riikonen, K.

    2017-02-01

    We present a refined version of a mathematical model called ESCAPE, "Expert System for Consequence Analysis and Preparing for Emergencies". The model has been designed for evaluating the releases of toxic and flammable gases into the atmosphere, their atmospheric dispersion and the effects on humans and the environment. We describe (i) the mathematical treatments of this model, (ii) a verification and evaluation of the model against selected experimental field data, and (iii) a new operational implementation of the model. The new mathematical treatments include state-of-the-art atmospheric vertical profiles and new submodels for dense gas and passive atmospheric dispersion. The model performance was first successfully verified using the data of the Thorney Island campaign, and then evaluated against the Desert Tortoise campaign. For the latter campaign, the geometric mean bias was 1.72 (this corresponds to an underprediction of approximately 70%) and 0.71 (overprediction of approximately 30%) for the concentration and the plume half-width, respectively. The geometric variance was computers, tablets and mobile phones. The predicted results can be post-processed using geographic information systems. The model has already proved to be a useful tool of assessment for the needs of emergency response authorities in contingency planning.

  11. UNSAT-H Version 2. 0: Unsaturated soil water and heat flow model

    Energy Technology Data Exchange (ETDEWEB)

    Fayer, M.J.; Jones, T.L.

    1990-04-01

    This report documents UNSAT-H Version 2.0, a model for calculating water and heat flow in unsaturated media. The documentation includes the bases for the conceptual model and its numerical implementation, benchmark test cases, example simulations involving layered soils and plant transpiration, and the code listing. Waste management practices at the Hanford Site have included disposal of low-level wastes by near-surface burial. Predicting the future long-term performance of any such burial site in terms of migration of contaminants requires a model capable of simulating water flow in the unsaturated soils above the buried waste. The model currently used to meet this need is UNSAT-H. This model was developed at Pacific Northwest Laboratory to assess water dynamics of near-surface, waste-disposal sites at the Hanford Site. The code is primarily used to predict deep drainage as a function of such environmental conditions as climate, soil type, and vegetation. UNSAT-H is also used to simulate the effects of various practices to enhance isolation of wastes. 66 refs., 29 figs., 7 tabs.

  12. A description of the FAMOUS (version XDBUA climate model and control run

    Directory of Open Access Journals (Sweden)

    A. Osprey

    2008-12-01

    Full Text Available FAMOUS is an ocean-atmosphere general circulation model of low resolution, capable of simulating approximately 120 years of model climate per wallclock day using current high performance computing facilities. It uses most of the same code as HadCM3, a widely used climate model of higher resolution and computational cost, and has been tuned to reproduce the same climate reasonably well. FAMOUS is useful for climate simulations where the computational cost makes the application of HadCM3 unfeasible, either because of the length of simulation or the size of the ensemble desired. We document a number of scientific and technical improvements to the original version of FAMOUS. These improvements include changes to the parameterisations of ozone and sea-ice which alleviate a significant cold bias from high northern latitudes and the upper troposphere, and the elimination of volume-averaged drifts in ocean tracers. A simple model of the marine carbon cycle has also been included. A particular goal of FAMOUS is to conduct millennial-scale paleoclimate simulations of Quaternary ice ages; to this end, a number of useful changes to the model infrastructure have been made.

  13. Alternative Factor Models and Heritability of the Short Leyton Obsessional Inventory--Children's Version

    Science.gov (United States)

    Moore, Janette; Smith, Gillian W.; Shevlin, Mark; O'Neill, Francis A.

    2010-01-01

    An alternative models framework was used to test three confirmatory factor analytic models for the Short Leyton Obsessional Inventory-Children's Version (Short LOI-CV) in a general population sample of 517 young adolescent twins (11-16 years). A one-factor model as implicit in current classification systems of Obsessive-Compulsive Disorder (OCD),…

  14. The MiniBIOS model (version 1A4) at the RIVM

    NARCIS (Netherlands)

    Uijt de Haag PAM; Laheij GMH

    1993-01-01

    This report is the user's guide of the MiniBIOS model, version 1A4. The model is operational at the Laboratory of Radiation Research of the RIVM. MiniBIOS is a simulation model for calculating the transport of radionuclides in the biosphere and the consequential radiation dose to humans. The

  15. The MiniBIOS model (version 1A4) at the RIVM

    NARCIS (Netherlands)

    Uijt de Haag PAM; Laheij GMH

    1993-01-01

    This report is the user's guide of the MiniBIOS model, version 1A4. The model is operational at the Laboratory of Radiation Research of the RIVM. MiniBIOS is a simulation model for calculating the transport of radionuclides in the biosphere and the consequential radiation dose to humans. The

  16. Simulating historical landscape dynamics using the landscape fire succession model LANDSUM version 4.0

    Science.gov (United States)

    Robert E. Keane; Lisa M. Holsinger; Sarah D. Pratt

    2006-01-01

    The range and variation of historical landscape dynamics could provide a useful reference for designing fuel treatments on today's landscapes. Simulation modeling is a vehicle that can be used to estimate the range of conditions experienced on historical landscapes. A landscape fire succession model called LANDSUMv4 (LANDscape SUccession Model version 4.0) is...

  17. The MiniBIOS model (version 1A4) at the RIVM

    NARCIS (Netherlands)

    Uijt de Haag PAM; Laheij GMH

    1993-01-01

    This report is the user's guide of the MiniBIOS model, version 1A4. The model is operational at the Laboratory of Radiation Research of the RIVM. MiniBIOS is a simulation model for calculating the transport of radionuclides in the biosphere and the consequential radiation dose to humans. The transp

  18. The MiniBIOS model (version 1A4) at the RIVM

    NARCIS (Netherlands)

    Uijt de Haag PAM; Laheij GMH

    1993-01-01

    This report is the user's guide of the MiniBIOS model, version 1A4. The model is operational at the Laboratory of Radiation Research of the RIVM. MiniBIOS is a simulation model for calculating the transport of radionuclides in the biosphere and the consequential radiation dose to humans. The

  19. Alternative Factor Models and Heritability of the Short Leyton Obsessional Inventory--Children's Version

    Science.gov (United States)

    Moore, Janette; Smith, Gillian W.; Shevlin, Mark; O'Neill, Francis A.

    2010-01-01

    An alternative models framework was used to test three confirmatory factor analytic models for the Short Leyton Obsessional Inventory-Children's Version (Short LOI-CV) in a general population sample of 517 young adolescent twins (11-16 years). A one-factor model as implicit in current classification systems of Obsessive-Compulsive Disorder (OCD),…

  20. Efficient Modelling and Generation of Markov Automata (extended version)

    NARCIS (Netherlands)

    Timmer, Mark; Katoen, Joost-Pieter; Pol, van de Jaco; Stoelinga, Mariëlle

    2012-01-01

    This paper introduces a framework for the efficient modelling and generation of Markov automata. It consists of (1) the data-rich process-algebraic language MAPA, allowing concise modelling of systems with nondeterminism, probability and Markovian timing; (2) a restricted form of the language, the M

  1. Goldilocks Models of Higher-Dimensional Inflation (including modulus stabilization)

    CERN Document Server

    Burgess, C P; Hayman, Peter; Patil, Subodh P

    2016-01-01

    We explore the mechanics of inflation in simplified extra-dimensional models involving an inflaton interacting with the Einstein-Maxwell system in two extra dimensions. The models are Goldilocks-like in that they are just complicated enough to include a mechanism to stabilize the extra-dimensional size, yet simple enough to solve the full 6D field equations using basic tools. The solutions are not limited to the effective 4D regime with H m_KK, but when they do standard 4D fluctuation calculations need not apply. When in a 4D regime the solutions predict eta ~ 0 hence n_s ~ 0.96 and r ~ 0.096 and so are ruled out if tensor modes remain unseen. Analysis of general parameters is difficult without a full 6D fluctuation calculation.

  2. Modeling the complete Otto cycle: Preliminary version. [computer programming

    Science.gov (United States)

    Zeleznik, F. J.; Mcbride, B. J.

    1977-01-01

    A description is given of the equations and the computer program being developed to model the complete Otto cycle. The program incorporates such important features as: (1) heat transfer, (2) finite combustion rates, (3) complete chemical kinetics in the burned gas, (4) exhaust gas recirculation, and (5) manifold vacuum or supercharging. Changes in thermodynamic, kinetic and transport data as well as model parameters can be made without reprogramming. Preliminary calculations indicate that: (1) chemistry and heat transfer significantly affect composition and performance, (2) there seems to be a strong interaction among model parameters, and (3) a number of cycles must be calculated in order to obtain steady-state conditions.

  3. Flipped version of the supersymmetric strongly coupled preon model

    Science.gov (United States)

    Fajfer, S.; Mileković, M.; Tadić, D.

    1989-12-01

    In the supersymmetric SU(5) [SUSY SU(5)] composite model (which was described in an earlier paper) the fermion mass terms can be easily constructed. The SUSY SU(5)⊗U(1), i.e., flipped, composite model possesses a completely analogous composite-particle spectrum. However, in that model one cannot construct a renormalizable superpotential which would generate fermion mass terms. This contrasts with the standard noncomposite grand unified theories (GUT's) in which both the Georgi-Glashow electrical charge embedding and its flipped counterpart lead to the renormalizable theories.

  4. U.S. Coastal Relief Model - Southern California Version 2

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NGDC's U.S. Coastal Relief Model (CRM) provides a comprehensive view of the U.S. coastal zone integrating offshore bathymetry with land topography into a seamless...

  5. Macro System Model (MSM) User Guide, Version 1.3

    Energy Technology Data Exchange (ETDEWEB)

    Ruth, M.; Diakov, V.; Sa, T.; Goldsby, M.

    2011-09-01

    This user guide describes the macro system model (MSM). The MSM has been designed to allow users to analyze the financial, environmental, transitional, geographical, and R&D issues associated with the transition to a hydrogen economy. Basic end users can use the MSM to answer cross-cutting questions that were previously difficult to answer in a consistent and timely manner due to various assumptions and methodologies among different models.

  6. A Systems Engineering Capability Maturity Model, Version 1.1,

    Science.gov (United States)

    1995-11-01

    Ongoing Skills and Knowledge 4-113 PA 18: Coordinate with Suppliers 4-120 Part 3: Appendices Appendix A Appendix B Appendix C Appendix D...Ward-Callan, C. Wasson, A. Wilbur, A.M. Wilhite, R. Williams, H. Wilson, D. Zaugg, and C. Zumba . continued on next page SM CMM and Capability...Model (SE-CMM) was developed as a response to industry requests for assistance in coordinating and publishing a model that would foster improvement

  7. Due Regard Encounter Model Version 1.0

    Science.gov (United States)

    2013-08-19

    Note that no existing model covers encoun- ters between two IFR aircraft in oceanic airspace. The reason for this is that one cannot observe encounters...encounters between instrument flight rules ( IFR ) and non- IFR traffic beyond 12NM. 2 TABLE 1 Encounter model categories. Aircraft of Interest Intruder...Aircraft Location Flight Rule IFR VFR Noncooperative Noncooperative Conventional Unconventional CONUS IFR C C U X VFR C U U X Offshore IFR C C U X VFR C U

  8. Using the Global Forest Products Model (GFPM version 2012)

    Science.gov (United States)

    Joseph Buongiorno; Shushuai Zhu

    2012-01-01

    The purpose of this manual is to enable users of the Global Forest Products Model to: • Install and run the GFPM software • Understand the input data • Change the input data to explore different scenarios • Interpret the output The GFPM is an economic model of global production, consumption and trade of forest products (Buongiorno et al. 2003). The GFPM2012 has data...

  9. VALIDATION OF THE ASTER GLOBAL DIGITAL ELEVATION MODEL VERSION 3 OVER THE CONTERMINOUS UNITED STATES

    Directory of Open Access Journals (Sweden)

    D. Gesch

    2016-06-01

    Full Text Available The ASTER Global Digital Elevation Model Version 3 (GDEM v3 was evaluated over the conterminous United States in a manner similar to the validation conducted for the original GDEM Version 1 (v1 in 2009 and GDEM Version 2 (v2 in 2011. The absolute vertical accuracy of GDEM v3 was calculated by comparison with more than 23,000 independent reference geodetic ground control points from the U.S. National Geodetic Survey. The root mean square error (RMSE measured for GDEM v3 is 8.52 meters. This compares with the RMSE of 8.68 meters for GDEM v2. Another important descriptor of vertical accuracy is the mean error, or bias, which indicates if a DEM has an overall vertical offset from true ground level. The GDEM v3 mean error of −1.20 meters reflects an overall negative bias in GDEM v3. The absolute vertical accuracy assessment results, both mean error and RMSE, were segmented by land cover type to provide insight into how GDEM v3 performs in various land surface conditions. While the RMSE varies little across cover types (6.92 to 9.25 meters, the mean error (bias does appear to be affected by land cover type, ranging from −2.99 to +4.16 meters across 14 land cover classes. These results indicate that in areas where built or natural aboveground features are present, GDEM v3 is measuring elevations above the ground level, a condition noted in assessments of previous GDEM versions (v1 and v2 and an expected condition given the type of stereo-optical image data collected by ASTER. GDEM v3 was also evaluated by differencing with the Shuttle Radar Topography Mission (SRTM dataset. In many forested areas, GDEM v3 has elevations that are higher in the canopy than SRTM. The overall validation effort also included an evaluation of the GDEM v3 water mask. In general, the number of distinct water polygons in GDEM v3 is much lower than the number in a reference land cover dataset, but the total areas compare much more closely.

  10. Validation of the ASTER Global Digital Elevation Model version 3 over the conterminous United States

    Science.gov (United States)

    Gesch, Dean B.; Oimoen, Michael J.; Danielson, Jeffrey J.; Meyer, David

    2016-01-01

    The ASTER Global Digital Elevation Model Version 3 (GDEM v3) was evaluated over the conterminous United States in a manner similar to the validation conducted for the original GDEM Version 1 (v1) in 2009 and GDEM Version 2 (v2) in 2011. The absolute vertical accuracy of GDEM v3 was calculated by comparison with more than 23,000 independent reference geodetic ground control points from the U.S. National Geodetic Survey. The root mean square error (RMSE) measured for GDEM v3 is 8.52 meters. This compares with the RMSE of 8.68 meters for GDEM v2. Another important descriptor of vertical accuracy is the mean error, or bias, which indicates if a DEM has an overall vertical offset from true ground level. The GDEM v3 mean error of −1.20 meters reflects an overall negative bias in GDEM v3. The absolute vertical accuracy assessment results, both mean error and RMSE, were segmented by land cover type to provide insight into how GDEM v3 performs in various land surface conditions. While the RMSE varies little across cover types (6.92 to 9.25 meters), the mean error (bias) does appear to be affected by land cover type, ranging from −2.99 to +4.16 meters across 14 land cover classes. These results indicate that in areas where built or natural aboveground features are present, GDEM v3 is measuring elevations above the ground level, a condition noted in assessments of previous GDEM versions (v1 and v2) and an expected condition given the type of stereo-optical image data collected by ASTER. GDEM v3 was also evaluated by differencing with the Shuttle Radar Topography Mission (SRTM) dataset. In many forested areas, GDEM v3 has elevations that are higher in the canopy than SRTM. The overall validation effort also included an evaluation of the GDEM v3 water mask. In general, the number of distinct water polygons in GDEM v3 is much lower than the number in a reference land cover dataset, but the total areas compare much more closely.

  11. Validation of the Aster Global Digital Elevation Model Version 3 Over the Conterminous United States

    Science.gov (United States)

    Gesch, D.; Oimoen, M.; Danielson, J.; Meyer, D.

    2016-06-01

    The ASTER Global Digital Elevation Model Version 3 (GDEM v3) was evaluated over the conterminous United States in a manner similar to the validation conducted for the original GDEM Version 1 (v1) in 2009 and GDEM Version 2 (v2) in 2011. The absolute vertical accuracy of GDEM v3 was calculated by comparison with more than 23,000 independent reference geodetic ground control points from the U.S. National Geodetic Survey. The root mean square error (RMSE) measured for GDEM v3 is 8.52 meters. This compares with the RMSE of 8.68 meters for GDEM v2. Another important descriptor of vertical accuracy is the mean error, or bias, which indicates if a DEM has an overall vertical offset from true ground level. The GDEM v3 mean error of -1.20 meters reflects an overall negative bias in GDEM v3. The absolute vertical accuracy assessment results, both mean error and RMSE, were segmented by land cover type to provide insight into how GDEM v3 performs in various land surface conditions. While the RMSE varies little across cover types (6.92 to 9.25 meters), the mean error (bias) does appear to be affected by land cover type, ranging from -2.99 to +4.16 meters across 14 land cover classes. These results indicate that in areas where built or natural aboveground features are present, GDEM v3 is measuring elevations above the ground level, a condition noted in assessments of previous GDEM versions (v1 and v2) and an expected condition given the type of stereo-optical image data collected by ASTER. GDEM v3 was also evaluated by differencing with the Shuttle Radar Topography Mission (SRTM) dataset. In many forested areas, GDEM v3 has elevations that are higher in the canopy than SRTM. The overall validation effort also included an evaluation of the GDEM v3 water mask. In general, the number of distinct water polygons in GDEM v3 is much lower than the number in a reference land cover dataset, but the total areas compare much more closely.

  12. Kinetic models of gene expression including non-coding RNAs

    Science.gov (United States)

    Zhdanov, Vladimir P.

    2011-03-01

    In cells, genes are transcribed into mRNAs, and the latter are translated into proteins. Due to the feedbacks between these processes, the kinetics of gene expression may be complex even in the simplest genetic networks. The corresponding models have already been reviewed in the literature. A new avenue in this field is related to the recognition that the conventional scenario of gene expression is fully applicable only to prokaryotes whose genomes consist of tightly packed protein-coding sequences. In eukaryotic cells, in contrast, such sequences are relatively rare, and the rest of the genome includes numerous transcript units representing non-coding RNAs (ncRNAs). During the past decade, it has become clear that such RNAs play a crucial role in gene expression and accordingly influence a multitude of cellular processes both in the normal state and during diseases. The numerous biological functions of ncRNAs are based primarily on their abilities to silence genes via pairing with a target mRNA and subsequently preventing its translation or facilitating degradation of the mRNA-ncRNA complex. Many other abilities of ncRNAs have been discovered as well. Our review is focused on the available kinetic models describing the mRNA, ncRNA and protein interplay. In particular, we systematically present the simplest models without kinetic feedbacks, models containing feedbacks and predicting bistability and oscillations in simple genetic networks, and models describing the effect of ncRNAs on complex genetic networks. Mathematically, the presentation is based primarily on temporal mean-field kinetic equations. The stochastic and spatio-temporal effects are also briefly discussed.

  13. Progress Towards an LES Wall Model Including Unresolved Roughness

    Science.gov (United States)

    Craft, Kyle; Redman, Andrew; Aikens, Kurt

    2015-11-01

    Wall models used in large eddy simulations (LES) are often based on theories for hydraulically smooth walls. While this is reasonable for many applications, there are also many where the impact of surface roughness is important. A previously developed wall model has been used primarily for jet engine aeroacoustics. However, jet simulations have not accurately captured thick initial shear layers found in some experimental data. This may partly be due to nozzle wall roughness used in the experiments to promote turbulent boundary layers. As a result, the wall model is extended to include the effects of unresolved wall roughness through appropriate alterations to the log-law. The methodology is tested for incompressible flat plate boundary layers with different surface roughness. Correct trends are noted for the impact of surface roughness on the velocity profile. However, velocity deficit profiles and the Reynolds stresses do not collapse as well as expected. Possible reasons for the discrepancies as well as future work will be presented. This work used the Extreme Science and Engineering Discovery Environment (XSEDE), which is supported by National Science Foundation grant number ACI-1053575. Computational resources on TACC Stampede were provided under XSEDE allocation ENG150001.

  14. Zig-zag version of the Frenkel-Kontorova model

    DEFF Research Database (Denmark)

    Christiansen, Peter Leth; Savin, A.V.; Zolotaryuk, Alexander

    1996-01-01

    We study a generalization of the Frenkel-Kontorova model which describes a zig-zag chain of particles coupled by both the first- and second-neighbor harmonic forces and subjected to a planar substrate with a commensurate potential relief. The particles are supposed to have two degrees of freedom:...

  15. A node-based version of the cellular Potts model.

    Science.gov (United States)

    Scianna, Marco; Preziosi, Luigi

    2016-09-01

    The cellular Potts model (CPM) is a lattice-based Monte Carlo method that uses an energetic formalism to describe the phenomenological mechanisms underlying the biophysical problem of interest. We here propose a CPM-derived framework that relies on a node-based representation of cell-scale elements. This feature has relevant consequences on the overall simulation environment. First, our model can be implemented on any given domain, provided a proper discretization (which can be regular or irregular, fixed or time evolving). Then, it allowed an explicit representation of cell membranes, whose displacements realistically result in cell movement. Finally, our node-based approach can be easily interfaced with continuous mechanics or fluid dynamics models. The proposed computational environment is here applied to some simple biological phenomena, such as cell sorting and chemotactic migration, also in order to achieve an analysis of the performance of the underlying algorithm. This work is finally equipped with a critical comparison between the advantages and disadvantages of our model with respect to the traditional CPM and to some similar vertex-based approaches. Copyright © 2016 Elsevier Ltd. All rights reserved.

  16. Parameter Estimation in Rainfall-Runoff Modelling Using Distributed Versions of Particle Swarm Optimization Algorithm

    Directory of Open Access Journals (Sweden)

    Michala Jakubcová

    2015-01-01

    Full Text Available The presented paper provides the analysis of selected versions of the particle swarm optimization (PSO algorithm. The tested versions of the PSO were combined with the shuffling mechanism, which splits the model population into complexes and performs distributed PSO optimization. One of them is a new proposed PSO modification, APartW, which enhances the global exploration and local exploitation in the parametric space during the optimization process through the new updating mechanism applied on the PSO inertia weight. The performances of four selected PSO methods were tested on 11 benchmark optimization problems, which were prepared for the special session on single-objective real-parameter optimization CEC 2005. The results confirm that the tested new APartW PSO variant is comparable with other existing distributed PSO versions, AdaptW and LinTimeVarW. The distributed PSO versions were developed for finding the solution of inverse problems related to the estimation of parameters of hydrological model Bilan. The results of the case study, made on the selected set of 30 catchments obtained from MOPEX database, show that tested distributed PSO versions provide suitable estimates of Bilan model parameters and thus can be used for solving related inverse problems during the calibration process of studied water balance hydrological model.

  17. Incremental Testing of the Community Multiscale Air Quality (CMAQ) Modeling System Version 4.7

    Science.gov (United States)

    This paper describes the scientific and structural updates to the latest release of the Community Multiscale Air Quality (CMAQ) modeling system version 4.7 (v4.7) and points the reader to additional resources for further details. The model updates were evaluated relative to obse...

  18. Connected Equipment Maturity Model Version 1.0

    Energy Technology Data Exchange (ETDEWEB)

    Butzbaugh, Joshua B. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Mayhorn, Ebony T. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Sullivan, Greg [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Whalen, Scott A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2017-05-01

    The Connected Equipment Maturity Model (CEMM) evaluates the high-level functionality and characteristics that enable equipment to provide the four categories of energy-related services through communication with other entities (e.g., equipment, third parties, utilities, and users). The CEMM will help the U.S. Department of Energy, industry, energy efficiency organizations, and research institutions benchmark the current state of connected equipment and identify capabilities that may be attained to reach a more advanced, future state.

  19. Numerical Modeling of Electroacoustic Logging Including Joule Heating

    Science.gov (United States)

    Plyushchenkov, Boris D.; Nikitin, Anatoly A.; Turchaninov, Victor I.

    It is well known that electromagnetic field excites acoustic wave in a porous elastic medium saturated with fluid electrolyte due to electrokinetic conversion effect. Pride's equations describing this process are written in isothermal approximation. Update of these equations, which allows to take influence of Joule heating on acoustic waves propagation into account, is proposed here. This update includes terms describing the initiation of additional acoustic waves excited by thermoelastic stresses and the heat conduction equation with right side defined by Joule heating. Results of numerical modeling of several problems of propagation of acoustic waves excited by an electric field source with and without consideration of Joule heating effect in their statements are presented. From these results, it follows that influence of Joule heating should be taken into account at the numerical simulation of electroacoustic logging and at the interpretation of its log data.

  20. Development of polygonal-surface version of ICRP reference phantoms: Lymphatic node modeling

    Energy Technology Data Exchange (ETDEWEB)

    Thang, Ngyen Tat; Yeom, Yeon Soo; Han, Min Cheol; Kim, Chan Hyeong [Hanyang University, Seoul (Korea, Republic of)

    2014-04-15

    Among radiosensitive organs/tissues considered in ICRP Publication 103, lymphatic nodes are many small size tissues and widely distributed in the ICRP reference phantoms. It is difficult to directly convert lymphatic nodes of ICRP reference voxel phantoms to polygonal surfaces. Furthermore, in the ICRP reference phantoms lymphatic nodes were manually drawn only in six lymphatic node regions and the reference number of lymphatic nodes reported in ICRP Publication 89 was not considered. To address aforementioned limitations, the present study developed a new lymphatic node modeling method for the polygonal-surface version of ICRP reference phantoms. By using the developed method, lymphatic nodes were modelled in the preliminary version of ICRP male polygonal-surface phantom. Then, lymphatic node dose values were calculated and compared with those of the ICRP reference male voxel phantom to validate the developed modeling method. The present study developed the new lymphatic node modeling method and successfully modeled lymphatic nodes in the preliminary version of the ICRP male polygonal-surface phantom. From the results, it was demonstrated that the developed modeling method can be used to model lymphatic nodes in polygonal-surface version of ICRP reference phantoms.

  1. Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions.

    Science.gov (United States)

    Hucka, Michael; Bergmann, Frank T; Dräger, Andreas; Hoops, Stefan; Keating, Sarah M; Le Novère, Nicolas; Myers, Chris J; Olivier, Brett G; Sahle, Sven; Schaff, James C; Smith, Lucian P; Waltemath, Dagmar; Wilkinson, Darren J

    2015-09-04

    Computational models can help researchers to interpret data, understand biological function, and make quantitative predictions. The Systems Biology Markup Language (SBML) is a file format for representing computational models in a declarative form that can be exchanged between different software systems. SBML is oriented towards describing biological processes of the sort common in research on a number of topics, including metabolic pathways, cell signaling pathways, and many others. By supporting SBML as an input/output format, different tools can all operate on an identical representation of a model, removing opportunities for translation errors and assuring a common starting point for analyses and simulations. This document provides the specification for Version 5 of SBML Level 2. The specification defines the data structures prescribed by SBML as well as their encoding in XML, the eXtensible Markup Language. This specification also defines validation rules that determine the validity of an SBML document, and provides many examples of models in SBML form. Other materials and software are available from the SBML project web site, http://sbml.org.

  2. Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions

    Science.gov (United States)

    Hucka, Michael; Bergmann, Frank T.; Dräger, Andreas; Hoops, Stefan; Keating, Sarah M.; Le Novére, Nicolas; Myers, Chris J.; Olivier, Brett G.; Sahle, Sven; Schaff, James C.; Smith, Lucian P.; Waltemath, Dagmar; Wilkinson, Darren J.

    2017-01-01

    Summary Computational models can help researchers to interpret data, understand biological function, and make quantitative predictions. The Systems Biology Markup Language (SBML) is a file format for representing computational models in a declarative form that can be exchanged between different software systems. SBML is oriented towards describing biological processes of the sort common in research on a number of topics, including metabolic pathways, cell signaling pathways, and many others. By supporting SBML as an input/output format, different tools can all operate on an identical representation of a model, removing opportunities for translation errors and assuring a common starting point for analyses and simulations. This document provides the specification for Version 5 of SBML Level 2. The specification defines the data structures prescribed by SBML as well as their encoding in XML, the eXtensible Markup Language. This specification also defines validation rules that determine the validity of an SBML document, and provides many examples of models in SBML form. Other materials and software are available from the SBML project web site, http://sbml.org/. PMID:26528569

  3. User manual for GEOCOST: a computer model for geothermal cost analysis. Volume 2. Binary cycle version

    Energy Technology Data Exchange (ETDEWEB)

    Huber, H.D.; Walter, R.A.; Bloomster, C.H.

    1976-03-01

    A computer model called GEOCOST has been developed to simulate the production of electricity from geothermal resources and calculate the potential costs of geothermal power. GEOCOST combines resource characteristics, power recovery technology, tax rates, and financial factors into one systematic model and provides the flexibility to individually or collectively evaluate their impacts on the cost of geothermal power. Both the geothermal reservoir and power plant are simulated to model the complete energy production system. In the version of GEOCOST in this report, geothermal fluid is supplied from wells distributed throughout a hydrothermal reservoir through insulated pipelines to a binary power plant. The power plant is simulated using a binary fluid cycle in which the geothermal fluid is passed through a series of heat exchangers. The thermodynamic state points in basic subcritical and supercritical Rankine cycles are calculated for a variety of working fluids. Working fluids which are now in the model include isobutane, n-butane, R-11, R-12, R-22, R-113, R-114, and ammonia. Thermodynamic properties of the working fluids at the state points are calculated using empirical equations of state. The Starling equation of state is used for hydrocarbons and the Martin-Hou equation of state is used for fluorocarbons and ammonia. Physical properties of working fluids at the state points are calculated.

  4. Modelling waste stabilisation ponds with an extended version of ASM3.

    Science.gov (United States)

    Gehring, T; Silva, J D; Kehl, O; Castilhos, A B; Costa, R H R; Uhlenhut, F; Alex, J; Horn, H; Wichern, M

    2010-01-01

    In this paper an extended version of IWA's Activated Sludge Model No 3 (ASM3) was developed to simulate processes in waste stabilisation ponds (WSP). The model modifications included the integration of algae biomass and gas transfer processes for oxygen, carbon dioxide and ammonia depending on wind velocity and a simple ionic equilibrium. The model was applied to a pilot-scale WSP system operated in the city of Florianópolis (Brazil). The system was used to treat leachate from a municipal waste landfill. Mean influent concentrations to the facultative pond of 1,456 g(COD)/m(3) and 505 g(NH4-N)/m(3) were measured. Experimental results indicated an ammonia nitrogen removal of 89.5% with negligible rates of nitrification but intensive ammonia stripping to the atmosphere. Measured data was used in the simulations to consider the impact of wind velocity on oxygen input of 11.1 to 14.4 g(O2)/(m(2) d) and sun radiation on photosynthesis. Good results for pH and ammonia removal were achieved with mean stripping rates of 18.2 and 4.5 g(N)/(m(2) d) for the facultative and maturation pond respectively. Based on measured chlorophyll a concentrations and depending on light intensity and TSS concentration it was possible to model algae concentrations.

  5. Diagnosing Lee Wave Rotor Onset Using a Linear Model Including a Boundary Layer

    Directory of Open Access Journals (Sweden)

    Miguel A. C. Teixeira

    2017-01-01

    Full Text Available A linear model is used to diagnose the onset of rotors in flow over 2D hills, for atmospheres that are neutrally stratified near the surface and stably stratified aloft, with a sharp temperature inversion in between, where trapped lee waves may propagate. This is achieved by coupling an inviscid two-layer mountain-wave model and a bulk boundary-layer model. The full model shows some ability to diagnose flow stagnation associated with rotors as a function of key input parameters, such as the Froude number and the height of the inversion, in numerical simulations and laboratory experiments carried out by previous authors. While calculations including only the effects of mean flow attenuation and velocity perturbation amplification within the surface layer represent flow stagnation fairly well in the more non-hydrostatic cases, only the full model, taking into account the feedback of the surface layer on the inviscid flow, satisfactorily predicts flow stagnation in the most hydrostatic case, although the corresponding condition is unable to discriminate between rotors and hydraulic jumps. Versions of the model not including this feedback severely underestimate the amplitude of trapped lee waves in that case, where the Fourier transform of the hill has zeros, showing that those waves are not forced directly by the orography.

  6. Overview of the Uniform California Earthquake Rupture Forecast Version 3 (UCERF3) Time-Independent Model

    Science.gov (United States)

    Field, E. H.; Arrowsmith, R.; Biasi, G. P.; Bird, P.; Dawson, T. E.; Felzer, K. R.; Jackson, D. D.; Johnson, K. M.; Jordan, T. H.; Madugo, C. M.; Michael, A. J.; Milner, K. R.; Page, M. T.; Parsons, T.; Powers, P.; Shaw, B. E.; Thatcher, W. R.; Weldon, R. J.; Zeng, Y.

    2013-12-01

    We present the time-independent component of the Uniform California Earthquake Rupture Forecast, Version 3 (UCERF3), where the primary achievements have been to relax fault segmentation and include multi-fault ruptures, both limitations of UCERF2. The rates of all earthquakes are solved for simultaneously, and from a broader range of data, using a system-level 'grand inversion' that is both conceptually simple and extensible. The inverse problem is large and underdetermined, so a range of models is sampled using an efficient simulated annealing algorithm. The approach is more derivative than prescriptive (e.g., magnitude-frequency distributions are no longer assumed), so new analysis tools were developed for exploring solutions. Epistemic uncertainties were also accounted for using 1440 alternative logic tree branches, necessitating access to supercomputers. The most influential uncertainties include alternative deformation models (fault slip rates), a new smoothed seismicity algorithm, alternative values for the total rate of M≥5 events, and different scaling relationships, virtually all of which are new. As a notable first, three deformation models are based on kinematically consistent inversions of geodetic and geologic data, also providing slip-rate constraints on faults previously excluded due to lack of geologic data. The grand inversion constitutes a system-level framework for testing hypotheses and balancing the influence of different experts. For example, we demonstrate serious challenges with the Gutenberg-Richter hypothesis for individual faults. UCERF3 is still an approximation of the system, however, and the range of models is limited (e.g., constrained to stay close to UCERF2). Nevertheless, UCERF3 removes the apparent UCERF2 over-prediction of M6.5-7 earthquake rates, and also includes types of multi-fault ruptures seen in nature. While UCERF3 fits the data better than UCERF2 overall, there may be areas that warrant further site

  7. Goldilocks models of higher-dimensional inflation (including modulus stabilization)

    Science.gov (United States)

    Burgess, C. P.; Enns, Jared J. H.; Hayman, Peter; Patil, Subodh P.

    2016-08-01

    We explore the mechanics of inflation within simplified extra-dimensional models involving an inflaton interacting with the Einstein-Maxwell system in two extra dimensions. The models are Goldilocks-like inasmuch as they are just complicated enough to include a mechanism to stabilize the extra-dimensional size (or modulus), yet simple enough to solve explicitly the full extra-dimensional field equations using only simple tools. The solutions are not restricted to the effective 4D regime with H ll mKK (the latter referring to the characteristic mass splitting of the Kaluza-Klein excitations) because the full extra-dimensional Einstein equations are solved. This allows an exploration of inflationary physics in a controlled calculational regime away from the usual four-dimensional lamp-post. The inclusion of modulus stabilization is important because experience with string models teaches that this is usually what makes models fail: stabilization energies easily dominate the shallow potentials required by slow roll and so open up directions to evolve that are steeper than those of the putative inflationary direction. We explore (numerically and analytically) three representative kinds of inflationary scenarios within this simple setup. In one the radion is trapped in an inflaton-dependent local minimum whose non-zero energy drives inflation. Inflation ends as this energy relaxes to zero when the inflaton finds its own minimum. The other two involve power-law scaling solutions during inflation. One of these is a dynamical attractor whose features are relatively insensitive to initial conditions but whose slow-roll parameters cannot be arbitrarily small; the other is not an attractor but can roll much more slowly, until eventually transitioning to the attractor. The scaling solutions can satisfy H > mKK, but when they do standard 4D fluctuation calculations need not apply. When in a 4D regime the solutions predict η simeq 0 and so r simeq 0.11 when ns simeq 0.96 and so

  8. Response Surface Modeling Tool Suite, Version 1.x

    Energy Technology Data Exchange (ETDEWEB)

    2016-07-05

    The Response Surface Modeling (RSM) Tool Suite is a collection of three codes used to generate an empirical interpolation function for a collection of drag coefficient calculations computed with Test Particle Monte Carlo (TPMC) simulations. The first code, "Automated RSM", automates the generation of a drag coefficient RSM for a particular object to a single command. "Automated RSM" first creates a Latin Hypercube Sample (LHS) of 1,000 ensemble members to explore the global parameter space. For each ensemble member, a TPMC simulation is performed and the object drag coefficient is computed. In the next step of the "Automated RSM" code, a Gaussian process is used to fit the TPMC simulations. In the final step, Markov Chain Monte Carlo (MCMC) is used to evaluate the non-analytic probability distribution function from the Gaussian process. The second code, "RSM Area", creates a look-up table for the projected area of the object based on input limits on the minimum and maximum allowed pitch and yaw angles and pitch and yaw angle intervals. The projected area from the look-up table is used to compute the ballistic coefficient of the object based on its pitch and yaw angle. An accurate ballistic coefficient is crucial in accurately computing the drag on an object. The third code, "RSM Cd", uses the RSM generated by the "Automated RSM" code and the projected area look-up table generated by the "RSM Area" code to accurately compute the drag coefficient and ballistic coefficient of the object. The user can modify the object velocity, object surface temperature, the translational temperature of the gas, the species concentrations of the gas, and the pitch and yaw angles of the object. Together, these codes allow for the accurate derivation of an object's drag coefficient and ballistic coefficient under any conditions with only knowledge of the object's geometry and mass.

  9. Thermal modelling. Preliminary site description Simpevarp subarea - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Sundberg, Jan; Back, Paer-Erik; Bengtsson, Anna; Laendell, Maerta [Geo Innova AB, Linkoeping (Sweden)

    2005-08-15

    This report presents the thermal site descriptive model for the Simpevarp subarea, version 1.2. The main objective of this report is to present the thermal modelling work where data has been identified, quality controlled, evaluated and summarised in order to make an upscaling to lithological domain level possible. The thermal conductivity at possible canister scale has been modelled for four different lithological domains (RSMA01 (Aevroe granite), RSMB01 (Fine-grained dioritoid), RSMC01 (mixture of Aevroe granite and Quartz monzodiorite), and RSMD01 (Quartz monzodiorite)). A main modelling approach has been used to determine the mean value of the thermal conductivity. Three alternative/complementary approaches have been used to evaluate the spatial variability of the thermal conductivity at domain level. The thermal modelling approaches are based on the lithological model for the Simpevarp subarea, version 1.2 together with rock type models constituted from measured and calculated (from mineral composition) thermal conductivities. For one rock type, the Aevroe granite (501044), density loggings within the specific rock type has also been used in the domain modelling in order to consider the spatial variability within the Aevroe granite. This has been possible due to the presented relationship between density and thermal conductivity, valid for the Aevroe granite. Results indicate that the mean of thermal conductivity is expected to exhibit only a small variation between the different domains, from 2.62 W/(m.K) to 2.80 W/(m.K). The standard deviation varies according to the scale considered and for the canister scale it is expected to range from 0.20 to 0.28 W/(m.K). Consequently, the lower confidence limit (95% confidence) for the canister scale is within the range 2.04-2.35 W/(m.K) for the different domains. The temperature dependence is rather small with a decrease in thermal conductivity of 1.1-3.4% per 100 deg C increase in temperature for the dominating rock

  10. Thermal modelling. Preliminary site description Laxemar subarea - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Sundberg, Jan; Wrafter, John; Back, Paer-Erik; Laendell, Maerta [Geo Innova AB, Linkoeping (Sweden)

    2006-02-15

    This report presents the thermal site descriptive model for the Laxemar subarea, version 1.2. The main objective of this report is to present the thermal modelling work where data has been identified, quality controlled, evaluated and summarised in order to make an upscaling to lithological domain level possible. The thermal conductivity at canister scale has been modelled for five different lithological domains: RSMA (Aevroe granite), RSMBA (mixture of Aevroe granite and fine-grained dioritoid), RSMD (quartz monzodiorite), RSME (diorite/gabbro) and RSMM (mix domain with high frequency of diorite to gabbro). A base modelling approach has been used to determine the mean value of the thermal conductivity. Four alternative/complementary approaches have been used to evaluate the spatial variability of the thermal conductivity at domain level. The thermal modelling approaches are based on the lithological domain model for the Laxemar subarea, version 1.2 together with rock type models based on measured and calculated (from mineral composition) thermal conductivities. For one rock type, Aevroe granite (501044), density loggings have also been used in the domain modelling in order to evaluate the spatial variability within the Aevroe granite. This has been possible due to an established relationship between density and thermal conductivity, valid for the Aevroe granite. Results indicate that the means of thermal conductivity for the various domains are expected to exhibit a variation from 2.45 W/(m.K) to 2.87 W/(m.K). The standard deviation varies according to the scale considered, and for the 0.8 m scale it is expected to range from 0.17 to 0.29 W/(m.K). Estimates of lower tail percentiles for the same scale are presented for all five domains. The temperature dependence is rather small with a decrease in thermal conductivity of 1.1-5.3% per 100 deg C increase in temperature for the dominant rock types. There are a number of important uncertainties associated with these

  11. COMODI: An ontology to characterise differences in versions of computational models in biology

    OpenAIRE

    Scharm, Martin; Waltemath, Dagmar; Mendes, Pedro; Wolkenhauer, Olaf

    2016-01-01

    Motivation: Open model repositories provide ready-to-reuse computational models of biological systems. Models within those repositories evolve over time, leading to many alternative and subsequent versions. Taken together, the underlying changes reflect a model’s provenance and thus can give valuable insights into the studied biology. Currently, however, changes cannot be semantically interpreted. To improve this situation, we developed an ontology of terms describing changes in computational...

  12. Including spatial data in nutrient balance modelling on dairy farms

    Science.gov (United States)

    van Leeuwen, Maricke; van Middelaar, Corina; Stoof, Cathelijne; Oenema, Jouke; Stoorvogel, Jetse; de Boer, Imke

    2017-04-01

    The Annual Nutrient Cycle Assessment (ANCA) calculates the nitrogen (N) and phosphorus (P) balance at a dairy farm, while taking into account the subsequent nutrient cycles of the herd, manure, soil and crop components. Since January 2016, Dutch dairy farmers are required to use ANCA in order to increase understanding of nutrient flows and to minimize nutrient losses to the environment. A nutrient balance calculates the difference between nutrient inputs and outputs. Nutrients enter the farm via purchased feed, fertilizers, deposition and fixation by legumes (nitrogen), and leave the farm via milk, livestock, manure, and roughages. A positive balance indicates to which extent N and/or P are lost to the environment via gaseous emissions (N), leaching, run-off and accumulation in soil. A negative balance indicates that N and/or P are depleted from soil. ANCA was designed to calculate average nutrient flows on farm level (for the herd, manure, soil and crop components). ANCA was not designed to perform calculations of nutrient flows at the field level, as it uses averaged nutrient inputs and outputs across all fields, and it does not include field specific soil characteristics. Land management decisions, however, such as the level of N and P application, are typically taken at the field level given the specific crop and soil characteristics. Therefore the information that ANCA provides is likely not sufficient to support farmers' decisions on land management to minimize nutrient losses to the environment. This is particularly a problem when land management and soils vary between fields. For an accurate estimate of nutrient flows in a given farming system that can be used to optimize land management, the spatial scale of nutrient inputs and outputs (and thus the effect of land management and soil variation) could be essential. Our aim was to determine the effect of the spatial scale of nutrient inputs and outputs on modelled nutrient flows and nutrient use efficiencies

  13. 78 FR 76791 - Availability of Version 4.0 of the Connect America Fund Phase II Cost Model; Adopting Current...

    Science.gov (United States)

    2013-12-19

    ... provide additional protection from harsh weather. This version modifies the prior methodology used for..., which provides more detail on the current model architecture, processing steps, and data sources...

  14. A new version of code Java for 3D simulation of the CCA model

    Science.gov (United States)

    Zhang, Kebo; Xiong, Hailing; Li, Chao

    2016-07-01

    In this paper we present a new version of the program of CCA model. In order to benefit from the advantages involved in the latest technologies, we migrated the running environment from JDK1.6 to JDK1.7. And the old program was optimized into a new framework, so promoted extendibility.

  15. All-Ages Lead Model (Aalm) Version 1.05 (External Draft Report)

    Science.gov (United States)

    The All-Ages Lead Model (AALM) Version 1.05, is an external review draft software and guidance manual. EPA released this software and associated documentation for public review and comment beginning September 27, 2005, until October 27, 2005. The public comments will be accepte...

  16. User guide for MODPATH Version 7—A particle-tracking model for MODFLOW

    Science.gov (United States)

    Pollock, David W.

    2016-09-26

    MODPATH is a particle-tracking post-processing program designed to work with MODFLOW, the U.S. Geological Survey (USGS) finite-difference groundwater flow model. MODPATH version 7 is the fourth major release since its original publication. Previous versions were documented in USGS Open-File Reports 89–381 and 94–464 and in USGS Techniques and Methods 6–A41.MODPATH version 7 works with MODFLOW-2005 and MODFLOW–USG. Support for unstructured grids in MODFLOW–USG is limited to smoothed, rectangular-based quadtree and quadpatch grids.A software distribution package containing the computer program and supporting documentation, such as input instructions, output file descriptions, and example problems, is available from the USGS over the Internet (http://water.usgs.gov/ogw/modpath/).

  17. Alaska Geochemical Database Version 2.0 (AGDB2) - Including "Best Value" Data Compilations for Geochemical Data for Rock, Sediment, Soil, Mineral, and Concentrate Sample Media

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — The Alaska Geochemical Database Version 2.0 (AGDB2) contains new geochemical data compilations in which each geologic material sample has one "best value"...

  18. A Discrete Velocity Traffic Kinetic Model Including Desired Speed

    Directory of Open Access Journals (Sweden)

    Shoufeng Lu

    2013-05-01

    Full Text Available We introduce the desired speed variable into the table of games and formulate a new table of games and the corresponding discrete traffic kinetic model. We use the hybrid programming technique of VB and MATLAB to develop the program. Lastly, we compared the proposed model result and the detector data. The results show that the proposed model can describe the traffic flow evolution.

  19. A Fault Evolution Model Including the Rupture Dynamic Simulation

    Science.gov (United States)

    Wu, Y.; Chen, X.

    2011-12-01

    We perform a preliminary numerical simulation of seismicity and stress evolution along a strike-slip fault in a 3D elastic half space. Following work of Ben-Zion (1996), the fault geometry is devised as a vertical plane which is about 70 km long and 17 km wide, comparable to the size of San Andreas Fault around Parkfield. The loading mechanism is described by "backslip" method. The fault failure is governed by a static/kinetic friction law, and induced stress transfer is calculated with Okada's static solution. In order to track the rupture propagation in detail, we allow induced stress to propagate through the medium at the shear wave velocity by introducing a distance-dependent time delay to responses to stress changes. Current simulation indicates small to moderate earthquakes following the Gutenberg-Richter law and quasi-periodical characteristic large earthquakes, which are consistent with previous work by others. Next we will consider introducing a more realistic friction law, namely, the laboratory-derived rate- and state- dependent law, which can simulate more realistic and complicated sliding behavior such as the stable and unstable slip, the aseismic sliding and the slip nucleation process. In addition, the long duration of aftershocks is expected to be reproduced due to this time-dependent friction law, which is not available in current seismicity simulation. The other difference from previous work is that we are trying to include the dynamic ruptures in this study. Most previous study on seismicity simulation is based on the static solution when dealing with failure induced stress changes. However, studies of numerical simulation of rupture dynamics have revealed lots of important details which are missing in the quasi-static/quasi- dynamic simulation. For example, dynamic simulations indicate that the slip on the ground surface becomes larger if the dynamic rupture process reaches the free surface. The concentration of stress on the propagating crack

  20. Site investigation SFR. Hydrogeological modelling of SFR. Model version 0.2

    Energy Technology Data Exchange (ETDEWEB)

    Oehman, Johan (Golder Associates AB (Sweden)); Follin, Sven (SF GeoLogic (Sweden))

    2010-01-15

    The Swedish Nuclear Fuel and Waste Management Company (SKB) has conducted site investigations for a planned extension of the existing final repository for short-lived radioactive waste (SFR). A hydrogeological model is developed in three model versions, which will be used for safety assessment and design analyses. This report presents a data analysis of the currently available hydrogeological data from the ongoing Site Investigation SFR (KFR27, KFR101, KFR102A, KFR102B, KFR103, KFR104, and KFR105). The purpose of this work is to develop a preliminary hydrogeological Discrete Fracture Network model (hydro-DFN) parameterisation that can be applied in regional-scale modelling. During this work, the Geologic model had not yet been updated for the new data set. Therefore, all analyses were made to the rock mass outside Possible Deformation Zones, according to Single Hole Interpretation. Owing to this circumstance, it was decided not to perform a complete hydro-DFN calibration at this stage. Instead focus was re-directed to preparatory test cases and conceptual questions with the aim to provide a sound strategy for developing the hydrogeological model SFR v. 1.0. The presented preliminary hydro-DFN consists of five fracture sets and three depth domains. A statistical/geometrical approach (connectivity analysis /Follin et al. 2005/) was performed to estimate the size (i.e. fracture radius) distribution of fractures that are interpreted as Open in geologic mapping of core data. Transmissivity relations were established based on an assumption of a correlation between the size and evaluated specific capacity of geologic features coupled to inflows measured by the Posiva Flow Log device (PFL-f data). The preliminary hydro-DFN was applied in flow simulations in order to test its performance and to explore the role of PFL-f data. Several insights were gained and a few model technical issues were raised. These are summarised in Table 5-1

  1. Evacuation modeling including traveler information and compliance behavior

    NARCIS (Netherlands)

    Pel, A.J.; Hoogendoorn, S.P.; Bliemer, M.C.J.

    2010-01-01

    Traffic simulation models are often used to support decisions when planning an evacuation. Scenario analyses based on these models then typically focus on traffic dynamics and the effect of traffic control measures in order to locate possible bottlenecks and predict evacuation times. A clear approac

  2. a Version-Similarity Based Trust Degree Computation Model for Crowdsourcing Geographic Data

    Science.gov (United States)

    Zhou, Xiaoguang; Zhao, Yijiang

    2016-06-01

    Quality evaluation and control has become the main concern of VGI. In this paper, trust is used as a proxy of VGI quality, a version-similarity based trust degree computation model for crowdsourcing geographic data is presented. This model is based on the assumption that the quality of VGI objects mainly determined by the professional skill and integrity (called reputation in this paper), and the reputation of the contributor is movable. The contributor's reputation is calculated using the similarity degree among the multi-versions for the same entity state. The trust degree of VGI object is determined by the trust degree of its previous version, the reputation of the last contributor and the modification proportion. In order to verify this presented model, a prototype system for computing the trust degree of VGI objects is developed by programming with Visual C# 2010. The historical data of Berlin of OpenStreetMap (OSM) are employed for experiments. The experimental results demonstrate that the quality of crowdsourcing geographic data is highly positive correlation with its trustworthiness. As the evaluation is based on version-similarity, not based on the direct subjective evaluation among users, the evaluation result is objective. Furthermore, as the movability property of the contributors' reputation is used in this presented method, our method has a higher assessment coverage than the existing methods.

  3. Energy Integration for 2050 - A Strategic Impact Model (2050 SIM), Version 2.0

    Energy Technology Data Exchange (ETDEWEB)

    John Collins

    2011-09-01

    The United States (U.S.) energy infrastructure is among the most reliable, accessible, and economic in the world. On the other hand, it is also excessively reliant on foreign energy sources, experiences high volatility in energy prices, does not always practice good stewardship of finite indigenous energy resources, and emits significant quantities of greenhouse gas. The U.S. Department of Energy is conducting research and development on advanced nuclear reactor concepts and technologies, including High Temperature Gas Reactor (HTGR) technologies, directed at helping the United States meet its current and future energy challenges. This report discusses the Draft Strategic Impact Model (SIM), an initial version of which was created during the later part of FY-2010. SIM was developed to analyze and depict the benefits of various energy sources in meeting the energy demand and to provide an overall system understanding of the tradeoffs between building and using HTGRs versus other existing technologies for providing energy (heat and electricity) to various energy-use sectors in the United States. This report also provides the assumptions used in the model, the rationale for the methodology, and the references for the source documentation and source data used in developing the SIM.

  4. Energy Integration for 2050 - A Strategic Impact Model (2050 SIM), Version 1.0

    Energy Technology Data Exchange (ETDEWEB)

    2010-10-01

    The United States (U.S.) energy infrastructure is among the most reliable, accessible, and economic in the world. On the other hand, it is also excessively reliant on foreign energy sources, experiences high volatility in energy prices, does not always practice good stewardship of finite indigenous energy resources, and emits significant quantities of greenhouse gas. The U.S. Department of Energy is conducting research and development on advanced nuclear reactor concepts and technologies, including High Temperature Gas Reactor (HTGR) technologies, directed at helping the United States meet its current and future energy challenges. This report discusses the Draft Strategic Impact Model (SIM), an initial version of which was created during the later part of FY-2010. SIM was developed to analyze and depict the benefits of various energy sources in meeting the energy demand and to provide an overall system understanding of the tradeoffs between building and using HTGRs versus other existing technologies for providing energy (heat and electricity) to various energy-use sectors in the United States. This report also provides the assumptions used in the model, the rationale for the methodology, and the references for the source documentation and source data used in developing the SIM.

  5. Development of a comprehensive survey of sexuality issues including a self-report version of the International Spinal Cord Injury sexual function basic data sets.

    Science.gov (United States)

    New, P W; Currie, K E

    2016-08-01

    Questionnaire development, validation and completion. Develop comprehensive survey of sexuality issues including validated self-report versions of the International Spinal Cord Injury male sexual function and female sexual and reproductive function basic data sets (SR-iSCI-sexual function). People with spinal cord damage (SCD) living in the community, Australia from August 2013 to June 2014. An iterative process involving rehabilitation medicine clinicians, a nurse specialising in sexuality issues in SCD and people with SCD who developed a comprehensive survey that included the SR-iSCI-sexual function. Participants recruitment through spinal rehabilitation review clinic and community organisations that support people with SCD. Surveys completed by 154 people. Most were male (n=101, 65.6%). Respondents' median age was 50 years (interquartile range (IQR) 38-58), and they were a median of 10 years (IQR 4-20) after the onset of SCD. Sexual problems unrelated to SCD were reported by 12 (8%) respondents, and 114 (n=75.5%) reported sexual problems because of SCD. Orgasms were much less likely (χ(2)=13.1, P=0.006) to be normal in males (n=5, 5%) compared with females (n=11, 22%). Males had significantly worse (χ(2)=26.0, P=0.001) psychogenic genital functioning (normal n=9, 9%) than females (normal n=13, 26%) and worse (χ(2)=10.8, P=0.013) reflex genital functioning. Normal ejaculation was reported in only three (3%) men. Most (n=26, 52%) women reported reduced or absent menstruation pattern since SCD. The SR-iSCI-sexual function provides a useful tool for researchers and clinicians to collect information regarding patient-reported sexual functioning after SCD and to facilitate comparative studies.

  6. A Fast Version of LASG/IAP Climate System Model and Its 1000-year Control Integration

    Institute of Scientific and Technical Information of China (English)

    ZHOU Tianjun; WU Bo; WEN Xinyu; LI Lijuan; WANG Bin

    2008-01-01

    A fast version of the State Key Laboratory of Numerical Modeling for Atmospheric Sciences and Geo- physical Fluid Dynamics (LASG)/Institute of Atmospheric Physics (IAP) climate system model is briefly documented. The fast coupled model employs a low resolution version of the atmospheric component Grid Atmospheric Model of IAP/LASG (GAMIL), with the other parts of the model, namely an oceanic com- ponent LASG/IAP Climate Ocean Model (LICOM), land component Common Land Model (CLM), and sea ice component from National Center for Atmospheric Research Community Climate System Model (NCAR CCSM2), as the same as in the standard version of LASG/IAP Flexible Global Ocean Atmosphere Land System model (FGOALS_g). The parameterizatious of physical and dynamical processes of the at- mospheric component in the fast version are identical to the standard version, although some parameter values are different. However, by virtue of reduced horizontal resolution and increased time-step of the most time-consuming atmospheric component, it runs faster by a factor of 3 and can serve as a useful tool for long- term and large-ensemble integrations. A 1000-year control simulation of the present-day climate has been completed without flux adjustments. The final 600 years of this simulation has virtually no trends in global mean sea surface temperatures and is recommended for internal variability studies. Several aspects of the control simulation's mean climate and variability axe evaluated against the observational or reanalysis data. The strengths and weaknesses of the control simulation are evaluated. The mean atmospheric circulation is well simulated, except in high latitudes. The Asian-Australian monsoonal meridional cell shows realistic features, however, an artificial rainfall center is located to the eastern periphery of the Tibetan Plateau persists throughout the year. The mean bias of SST resembles that of the standard version, appearing as a "double ITCZ" (Inter

  7. The Lagrangian particle dispersion model FLEXPART-WRF VERSION 3.1

    Energy Technology Data Exchange (ETDEWEB)

    Brioude, J.; Arnold, D.; Stohl, A.; Cassiani, M.; Morton, Don; Seibert, P.; Angevine, W. M.; Evan, S.; Dingwell, A.; Fast, Jerome D.; Easter, Richard C.; Pisso, I.; Bukhart, J.; Wotawa, G.

    2013-11-01

    The Lagrangian particle dispersion model FLEXPART was originally designed for cal- culating long-range and mesoscale dispersion of air pollutants from point sources, such as after an accident in a nuclear power plant. In the meantime FLEXPART has evolved into a comprehensive tool for atmospheric transport modeling and analysis at different scales. This multiscale need from the modeler community has encouraged new developments in FLEXPART. In this document, we present a version that works with the Weather Research and Forecasting (WRF) mesoscale meteoro- logical model. Simple procedures on how to run FLEXPART-WRF are presented along with special options and features that differ from its predecessor versions. In addition, test case data, the source code and visualization tools are provided to the reader as supplementary material.

  8. Description and evaluation of the Community Multiscale Air Quality (CMAQ) modeling system version 5.1

    Science.gov (United States)

    Wyat Appel, K.; Napelenok, Sergey L.; Foley, Kristen M.; Pye, Havala O. T.; Hogrefe, Christian; Luecken, Deborah J.; Bash, Jesse O.; Roselle, Shawn J.; Pleim, Jonathan E.; Foroutan, Hosein; Hutzell, William T.; Pouliot, George A.; Sarwar, Golam; Fahey, Kathleen M.; Gantt, Brett; Gilliam, Robert C.; Heath, Nicholas K.; Kang, Daiwen; Mathur, Rohit; Schwede, Donna B.; Spero, Tanya L.; Wong, David C.; Young, Jeffrey O.

    2017-04-01

    The Community Multiscale Air Quality (CMAQ) model is a comprehensive multipollutant air quality modeling system developed and maintained by the US Environmental Protection Agency's (EPA) Office of Research and Development (ORD). Recently, version 5.1 of the CMAQ model (v5.1) was released to the public, incorporating a large number of science updates and extended capabilities over the previous release version of the model (v5.0.2). These updates include the following: improvements in the meteorological calculations in both CMAQ and the Weather Research and Forecast (WRF) model used to provide meteorological fields to CMAQ, updates to the gas and aerosol chemistry, revisions to the calculations of clouds and photolysis, and improvements to the dry and wet deposition in the model. Sensitivity simulations isolating several of the major updates to the modeling system show that changes to the meteorological calculations result in enhanced afternoon and early evening mixing in the model, periods when the model historically underestimates mixing. This enhanced mixing results in higher ozone (O3) mixing ratios on average due to reduced NO titration, and lower fine particulate matter (PM2. 5) concentrations due to greater dilution of primary pollutants (e.g., elemental and organic carbon). Updates to the clouds and photolysis calculations greatly improve consistency between the WRF and CMAQ models and result in generally higher O3 mixing ratios, primarily due to reduced cloudiness and attenuation of photolysis in the model. Updates to the aerosol chemistry result in higher secondary organic aerosol (SOA) concentrations in the summer, thereby reducing summertime PM2. 5 bias (PM2. 5 is typically underestimated by CMAQ in the summer), while updates to the gas chemistry result in slightly higher O3 and PM2. 5 on average in January and July. Overall, the seasonal variation in simulated PM2. 5 generally improves in CMAQv5.1 (when considering all model updates), as simulated PM2. 5

  9. The Flexible Global Ocean-Atmosphere-Land System Model,Grid-point Version 2:FGOALS-g2

    Institute of Scientific and Technical Information of China (English)

    LI Lijuan; LIN Pengfei; YU Yongqiang; WANG Bin; ZHOU Tianjun; LIU Li; LIU Jiping

    2013-01-01

    This study mainly introduces the development of the Flexible Global Ocean-Atmosphere-Land System Model:Grid-point Version 2 (FGOALS-g2) and the preliminary evaluations of its performances based on results from the pre-industrial control run and four members of historical runs according to the fifth phase of the Coupled Model Intercomparison Project (CMIP5) experiment design.The results suggest that many obvious improvements have been achieved by the FGOALS-g2 compared with the previous version,FGOALS-g1,including its climatological mean states,climate variability,and 20th century surface temperature evolution.For example,FGOALS-g2 better simulates the frequency of tropical land precipitation,East Asian Monsoon precipitation and its seasonal cycle,MJO and ENSO,which are closely related to the updated cumulus parameterization scheme,as well as the alleviation of uncertainties in some key parameters in shallow and deep convection schemes,cloud fraction,cloud macro/microphysical processes and the boundary layer scheme in its atmospheric model.The annual cycle of sea surface temperature along the equator in the Pacific is significantly improved in the new version.The sea ice salinity simulation is one of the unique characteristics of FGOALS-g2,although it is somehow inconsistent with empirical observations in the Antarctic.

  10. An Intracellular Calcium Oscillations Model Including Mitochondrial Calcium Cycling

    Institute of Scientific and Technical Information of China (English)

    SHI Xiao-Min; LIU Zeng-Rong

    2005-01-01

    @@ Calcium is a ubiquitous second messenger. Mitochondria contributes significantly to intracellular Ca2+ dynamics.The experiment of Kaftan et al. [J. Biol. Chem. 275(2000) 25465] demonstrated that inhibiting mitochondrial Ca2+ uptake can reduce the frequency of cytosolic Ca2+ concentration oscillations of gonadotropes. By considering the mitochondrial Ca2+ cycling we develop a three-variable model of intracellular Ca2+ oscillations based on the models of Atri et al. [Biophys. J. 65 (1993) 1727] and Falcke et al. [Biophys. J. 77 (1999) 37]. The model reproduces the fact that mitochondrial Ca2+ cycling increases the frequency of cytosolic Ca2+ oscillations, which accords with Kaftan's results. Moreover the model predicts that when the mitochondria overload with Ca2+, the cytosolic Ca2+ oscillations vanish, which may trigger apoptosis.

  11. Approaches in highly parameterized inversion—PEST++ Version 3, a Parameter ESTimation and uncertainty analysis software suite optimized for large environmental models

    Science.gov (United States)

    Welter, David E.; White, Jeremy T.; Hunt, Randall J.; Doherty, John E.

    2015-09-18

    The PEST++ Version 1 object-oriented parameter estimation code is here extended to Version 3 to incorporate additional algorithms and tools to further improve support for large and complex environmental modeling problems. PEST++ Version 3 includes the Gauss-Marquardt-Levenberg (GML) algorithm for nonlinear parameter estimation, Tikhonov regularization, integrated linear-based uncertainty quantification, options of integrated TCP/IP based parallel run management or external independent run management by use of a Version 2 update of the GENIE Version 1 software code, and utilities for global sensitivity analyses. The Version 3 code design is consistent with PEST++ Version 1 and continues to be designed to lower the barriers of entry for users as well as developers while providing efficient and optimized algorithms capable of accommodating large, highly parameterized inverse problems. As such, this effort continues the original focus of (1) implementing the most popular and powerful features of the PEST software suite in a fashion that is easy for novice or experienced modelers to use and (2) developing a software framework that is easy to extend.

  12. Approaches in highly parameterized inversion—PEST++ Version 3, a Parameter ESTimation and uncertainty analysis software suite optimized for large environmental models

    Science.gov (United States)

    Welter, David E.; White, Jeremy T.; Hunt, Randall J.; Doherty, John E.

    2015-09-18

    The PEST++ Version 1 object-oriented parameter estimation code is here extended to Version 3 to incorporate additional algorithms and tools to further improve support for large and complex environmental modeling problems. PEST++ Version 3 includes the Gauss-Marquardt-Levenberg (GML) algorithm for nonlinear parameter estimation, Tikhonov regularization, integrated linear-based uncertainty quantification, options of integrated TCP/IP based parallel run management or external independent run management by use of a Version 2 update of the GENIE Version 1 software code, and utilities for global sensitivity analyses. The Version 3 code design is consistent with PEST++ Version 1 and continues to be designed to lower the barriers of entry for users as well as developers while providing efficient and optimized algorithms capable of accommodating large, highly parameterized inverse problems. As such, this effort continues the original focus of (1) implementing the most popular and powerful features of the PEST software suite in a fashion that is easy for novice or experienced modelers to use and (2) developing a software framework that is easy to extend.

  13. Uniform California earthquake rupture forecast, version 3 (UCERF3): the time-independent model

    Science.gov (United States)

    Field, Edward H.; Biasi, Glenn P.; Bird, Peter; Dawson, Timothy E.; Felzer, Karen R.; Jackson, David D.; Johnson, Kaj M.; Jordan, Thomas H.; Madden, Christopher; Michael, Andrew J.; Milner, Kevin R.; Page, Morgan T.; Parsons, Thomas; Powers, Peter M.; Shaw, Bruce E.; Thatcher, Wayne R.; Weldon, Ray J.; Zeng, Yuehua; ,

    2013-01-01

    In this report we present the time-independent component of the Uniform California Earthquake Rupture Forecast, Version 3 (UCERF3), which provides authoritative estimates of the magnitude, location, and time-averaged frequency of potentially damaging earthquakes in California. The primary achievements have been to relax fault segmentation assumptions and to include multifault ruptures, both limitations of the previous model (UCERF2). The rates of all earthquakes are solved for simultaneously, and from a broader range of data, using a system-level "grand inversion" that is both conceptually simple and extensible. The inverse problem is large and underdetermined, so a range of models is sampled using an efficient simulated annealing algorithm. The approach is more derivative than prescriptive (for example, magnitude-frequency distributions are no longer assumed), so new analysis tools were developed for exploring solutions. Epistemic uncertainties were also accounted for using 1,440 alternative logic tree branches, necessitating access to supercomputers. The most influential uncertainties include alternative deformation models (fault slip rates), a new smoothed seismicity algorithm, alternative values for the total rate of M≥5 events, and different scaling relationships, virtually all of which are new. As a notable first, three deformation models are based on kinematically consistent inversions of geodetic and geologic data, also providing slip-rate constraints on faults previously excluded because of lack of geologic data. The grand inversion constitutes a system-level framework for testing hypotheses and balancing the influence of different experts. For example, we demonstrate serious challenges with the Gutenberg-Richter hypothesis for individual faults. UCERF3 is still an approximation of the system, however, and the range of models is limited (for example, constrained to stay close to UCERF2). Nevertheless, UCERF3 removes the apparent UCERF2 overprediction of

  14. UNSAT-H Version 3.0: Unsaturated Soil Water and Heat Flow Model Theory, User Manual, and Examples

    Energy Technology Data Exchange (ETDEWEB)

    MJ Fayer

    2000-06-12

    The UNSAT-H model was developed at Pacific Northwest National Laboratory (PNNL) to assess the water dynamics of arid sites and, in particular, estimate recharge fluxes for scenarios pertinent to waste disposal facilities. During the last 4 years, the UNSAT-H model received support from the Immobilized Waste Program (IWP) of the Hanford Site's River Protection Project. This program is designing and assessing the performance of on-site disposal facilities to receive radioactive wastes that are currently stored in single- and double-shell tanks at the Hanford Site (LMHC 1999). The IWP is interested in estimates of recharge rates for current conditions and long-term scenarios involving the vadose zone disposal of tank wastes. Simulation modeling with UNSAT-H is one of the methods being used to provide those estimates (e.g., Rockhold et al. 1995; Fayer et al. 1999). To achieve the above goals for assessing water dynamics and estimating recharge rates, the UNSAT-H model addresses soil water infiltration, redistribution, evaporation, plant transpiration, deep drainage, and soil heat flow as one-dimensional processes. The UNSAT-H model simulates liquid water flow using Richards' equation (Richards 1931), water vapor diffusion using Fick's law, and sensible heat flow using the Fourier equation. This report documents UNSAT-H .Version 3.0. The report includes the bases for the conceptual model and its numerical implementation, benchmark test cases, example simulations involving layered soils and plants, and the code manual. Version 3.0 is an, enhanced-capability update of UNSAT-H Version 2.0 (Fayer and Jones 1990). New features include hysteresis, an iterative solution of head and temperature, an energy balance check, the modified Picard solution technique, additional hydraulic functions, multiple-year simulation capability, and general enhancements.

  15. A one-dimensional material transfer model for HECTR version 1. 5

    Energy Technology Data Exchange (ETDEWEB)

    Geller, A.S.; Wong, C.C.

    1991-08-01

    HECTR (Hydrogen Event Containment Transient Response) is a lumped-parameter computer code developed for calculating the pressure-temperature response to combustion in a nuclear power plant containment building. The code uses a control-volume approach and subscale models to simulate the mass, momentum, and energy transfer occurring in the containment during a loss-of-collant-accident (LOCA). This document describes one-dimensional subscale models for mass and momentum transfer, and the modifications to the code required to implement them. Two problems were analyzed: the first corresponding to a standard problem studied with previous HECTR versions, the second to experiments. The performance of the revised code relative to previous HECTR version is discussed as is the ability of the code to model the experiments. 8 refs., 5 figs., 3 tabs.

  16. Alaska Geochemical Database, Version 2.0 (AGDB2)--including “best value” data compilations for rock, sediment, soil, mineral, and concentrate sample media

    Science.gov (United States)

    Granitto, Matthew; Schmidt, Jeanine M.; Shew, Nora B.; Gamble, Bruce M.; Labay, Keith A.

    2013-01-01

    The Alaska Geochemical Database Version 2.0 (AGDB2) contains new geochemical data compilations in which each geologic material sample has one “best value” determination for each analyzed species, greatly improving speed and efficiency of use. Like the Alaska Geochemical Database (AGDB, http://pubs.usgs.gov/ds/637/) before it, the AGDB2 was created and designed to compile and integrate geochemical data from Alaska in order to facilitate geologic mapping, petrologic studies, mineral resource assessments, definition of geochemical baseline values and statistics, environmental impact assessments, and studies in medical geology. This relational database, created from the Alaska Geochemical Database (AGDB) that was released in 2011, serves as a data archive in support of present and future Alaskan geologic and geochemical projects, and contains data tables in several different formats describing historical and new quantitative and qualitative geochemical analyses. The analytical results were determined by 85 laboratory and field analytical methods on 264,095 rock, sediment, soil, mineral and heavy-mineral concentrate samples. Most samples were collected by U.S. Geological Survey personnel and analyzed in U.S. Geological Survey laboratories or, under contracts, in commercial analytical laboratories. These data represent analyses of samples collected as part of various U.S. Geological Survey programs and projects from 1962 through 2009. In addition, mineralogical data from 18,138 nonmagnetic heavy-mineral concentrate samples are included in this database. The AGDB2 includes historical geochemical data originally archived in the U.S. Geological Survey Rock Analysis Storage System (RASS) database, used from the mid-1960s through the late 1980s and the U.S. Geological Survey PLUTO database used from the mid-1970s through the mid-1990s. All of these data are currently maintained in the National Geochemical Database (NGDB). Retrievals from the NGDB were used to generate

  17. The global chemistry transport model TM5: description and evaluation of the tropospheric chemistry version 3.0

    NARCIS (Netherlands)

    Huijnen, V.; Williams, J.; van Weele, M.; van Noije, T.; Krol, M.; Dentener, F.; Segers, A.; Houweling, S.; Peters, W.; de Laat, J.; Boersma, F.; Bergamaschi, P.; van Velthoven, P.; Le Sager, P.; Eskes, H.; Alkemade, F.; Scheele, R.; Nédélec, P.; Pätz, H.-W.

    2010-01-01

    We present a comprehensive description and benchmark evaluation of the tropospheric chemistry version of the global chemistry transport model TM5 (Tracer Model 5, version TM5-chem-v3.0). A full description is given concerning the photochemical mechanism, the interaction with aerosol, the treatment o

  18. Cement-aggregate compatibility and structure property relationships including modelling

    Energy Technology Data Exchange (ETDEWEB)

    Jennings, H.M.; Xi, Y.

    1993-07-15

    The role of aggregate, and its interface with cement paste, is discussed with a view toward establishing models that relate structure to properties. Both short (nm) and long (mm) range structure must be considered. The short range structure of the interface depends not only on the physical distribution of the various phases, but also on moisture content and reactivity of aggregate. Changes that occur on drying, i.e. shrinkage, may alter the structure which, in turn, feeds back to alter further drying and shrinkage. The interaction is dynamic, even without further hydration of cement paste, and the dynamic characteristic must be considered in order to fully understand and model its contribution to properties. Microstructure and properties are two subjects which have been pursued somewhat separately. This review discusses both disciplines with a view toward finding common research goals in the future. Finally, comment is made on possible chemical reactions which may occur between aggregate and cement paste.

  19. Including lateral interactions into microkinetic models of catalytic reactions

    DEFF Research Database (Denmark)

    Hellman, Anders; Honkala, Johanna Karoliina

    2007-01-01

    In many catalytic reactions lateral interactions between adsorbates are believed to have a strong influence on the reaction rates. We apply a microkinetic model to explore the effect of lateral interactions and how to efficiently take them into account in a simple catalytic reaction. Three differ...... different approximations are investigated: site, mean-field, and quasichemical approximations. The obtained results are compared to accurate Monte Carlo numbers. In the end, we apply the approximations to a real catalytic reaction, namely, ammonia synthesis....

  20. Comparison of Joint Modeling Approaches Including Eulerian Sliding Interfaces

    Energy Technology Data Exchange (ETDEWEB)

    Lomov, I; Antoun, T; Vorobiev, O

    2009-12-16

    Accurate representation of discontinuities such as joints and faults is a key ingredient for high fidelity modeling of shock propagation in geologic media. The following study was done to improve treatment of discontinuities (joints) in the Eulerian hydrocode GEODYN (Lomov and Liu 2005). Lagrangian methods with conforming meshes and explicit inclusion of joints in the geologic model are well suited for such an analysis. Unfortunately, current meshing tools are unable to automatically generate adequate hexahedral meshes for large numbers of irregular polyhedra. Another concern is that joint stiffness in such explicit computations requires significantly reduced time steps, with negative implications for both the efficiency and quality of the numerical solution. An alternative approach is to use non-conforming meshes and embed joint information into regular computational elements. However, once slip displacement on the joints become comparable to the zone size, Lagrangian (even non-conforming) meshes could suffer from tangling and decreased time step problems. The use of non-conforming meshes in an Eulerian solver may alleviate these difficulties and provide a viable numerical approach for modeling the effects of faults on the dynamic response of geologic materials. We studied shock propagation in jointed/faulted media using a Lagrangian and two Eulerian approaches. To investigate the accuracy of this joint treatment the GEODYN calculations have been compared with results from the Lagrangian code GEODYN-L which uses an explicit treatment of joints via common plane contact. We explore two approaches to joint treatment in the code, one for joints with finite thickness and the other for tight joints. In all cases the sliding interfaces are tracked explicitly without homogenization or blending the joint and block response into an average response. In general, rock joints will introduce an increase in normal compliance in addition to a reduction in shear strength. In the

  1. Neighboring extremal optimal control design including model mismatch errors

    Energy Technology Data Exchange (ETDEWEB)

    Kim, T.J. [Sandia National Labs., Albuquerque, NM (United States); Hull, D.G. [Texas Univ., Austin, TX (United States). Dept. of Aerospace Engineering and Engineering Mechanics

    1994-11-01

    The mismatch control technique that is used to simplify model equations of motion in order to determine analytic optimal control laws is extended using neighboring extremal theory. The first variation optimal control equations are linearized about the extremal path to account for perturbations in the initial state and the final constraint manifold. A numerical example demonstrates that the tuning procedure inherent in the mismatch control method increases the performance of the controls to the level of a numerically-determined piecewise-linear controller.

  2. Double pendulum model for tennis stroke including a collision process

    CERN Document Server

    Youn, Sun-Hyun

    2015-01-01

    By means of adding a collision process between the ball and racket in double pendulum model, we analyzed the tennis stroke. It is possible that the speed of the rebound ball does not simply depend on the angular velocity of the racket, and higher angular velocity sometimes gives lower ball speed. We numerically showed that the proper time lagged racket rotation increases the speed of the rebound ball by 20%. We also showed that the elbow should move in order to add the angular velocity of the racket.

  3. Does Diversity Matter In Modeling? Testing A New Version Of The FORMIX3 Growth Model For Madagascar Rainforests

    Science.gov (United States)

    Armstrong, A. H.; Fischer, R.; Shugart, H. H.; Huth, A.

    2012-12-01

    Ecological forecasting has become an essential tool used by ecologists to understand the dynamics of growth and disturbance response in threatened ecosystems such as the rainforests of Madagascar. In the species rich tropics, forest conservation is often eclipsed by anthropogenic factors, resulting in a heightened need for accurate assessment of biomass before these ecosystems disappear. The objective of this study was to test a new Madagascar rainforest specific version of the FORMIX3 growth model (Huth and Ditzer, 2000; Huth et al 1998) to assess how accurately biomass can be simulated in high biodiversity forests using a method of functional type aggregation in an individual-based model framework. Rainforest survey data collected over three growing seasons, including 265 tree species, was aggregated into 12 plant functional types based on size and light requirements. Findings indicated that the forest study site compared best when the simulated forest reached mature successional status. Multiple level comparisons between model simulation data and survey plot data found that though some features, such as the dominance of canopy emergent species and relative absence of small woody treelets are captured by the model, other forest attributes were not well reflected. Overall, the ability to accurately simulate the Madagascar rainforest was slightly diminished by the aggregation of tree species into size and light requirement functional type groupings.

  4. Modelling of Dual-Junction Solar Cells including Tunnel Junction

    Directory of Open Access Journals (Sweden)

    Abdelaziz Amine

    2013-01-01

    Full Text Available Monolithically stacked multijunction solar cells based on III–V semiconductors materials are the state-of-art of approach for high efficiency photovoltaic energy conversion, in particular for space applications. The individual subcells of the multi-junction structure are interconnected via tunnel diodes which must be optically transparent and connect the component cells with a minimum electrical resistance. The quality of these diodes determines the output performance of the solar cell. The purpose of this work is to contribute to the investigation of the tunnel electrical resistance of such a multi-junction cell through the analysis of the current-voltage (J-V characteristics under illumination. Our approach is based on an equivalent circuit model of a diode for each subcell. We examine the effect of tunnel resistance on the performance of a multi-junction cell using minimization of the least squares technique.

  5. Human sperm chromatin stabilization: a proposed model including zinc bridges.

    Science.gov (United States)

    Björndahl, Lars; Kvist, Ulrik

    2010-01-01

    The primary focus of this review is to challenge the current concepts on sperm chromatin stability. The observations (i) that zinc depletion at ejaculation allows a rapid and total sperm chromatin decondensation without the addition of exogenous disulfide cleaving agents and (ii) that the human sperm chromatin contains one zinc for every protamine for every turn of the DNA helix suggest an alternative model for sperm chromatin structure may be plausible. An alternative model is therefore proposed, that the human spermatozoon could at ejaculation have a rapidly reversible zinc dependent chromatin stability: Zn(2+) stabilizes the structure and prevents the formation of excess disulfide bridges by a single mechanism, the formation of zinc bridges with protamine thiols of cysteine and potentially imidazole groups of histidine. Extraction of zinc enables two biologically totally different outcomes: immediate decondensation if chromatin fibers are concomitantly induced to repel (e.g. by phosphorylation in the ooplasm); otherwise freed thiols become committed into disulfide bridges creating a superstabilized chromatin. Spermatozoa in the zinc rich prostatic fluid (normally the first expelled ejaculate fraction) represent the physiological situation. Extraction of chromatin zinc can be accomplished by the seminal vesicular fluid. Collection of the ejaculate in one single container causes abnormal contact between spermatozoa and seminal vesicular fluid affecting the sperm chromatin stability. There are men in infertile couples with low content of sperm chromatin zinc due to loss of zinc during ejaculation and liquefaction. Tests for sperm DNA integrity may give false negative results due to decreased access for the assay to the DNA in superstabilized chromatin.

  6. Global model including multistep ionizations in helium plasmas

    Science.gov (United States)

    Oh, Seung-Ju; Lee, Hyo-Chang; Chung, Chin-Wook

    2016-12-01

    Particle and power balance equations including stepwise ionizations are derived and solved in helium plasmas. In the balance equations, two metastable states (21S1 in singlet and 23S1 triplet) are considered and the followings are obtained. The plasma density linearly increases and the electron temperature is relatively in a constant value against the absorbed power. It is also found that the contribution to multi-step ionization with respect to the single-step ionization is in the range of 8%-23%, as the gas pressure increases from 10 mTorr to 100 mTorr. Compared to the results in the argon plasma, there is little variation in the collisional energy loss per electron-ion pair created (ɛc) with absorbed power and gas pressure due to the small collision cross section and higher inelastic collision threshold energy.

  7. A new tool for modeling dune field evolution based on an accessible, GUI version of the Werner dune model

    Science.gov (United States)

    Barchyn, Thomas E.; Hugenholtz, Chris H.

    2012-02-01

    Research into aeolian dune form and dynamics has benefited from simple and abstract cellular automata computer models. Many of these models are based upon a seminal framework proposed by Werner (1995). Unfortunately, most versions of this model are not publicly available or are not provided in a format that promotes widespread use. In our view, this hinders progress in linking model simulations to empirical data (and vice versa). To this end, we introduce an accessible, graphical user interface (GUI) version of the Werner model. The novelty of this contribution is that it provides a simple interface and detailed instructions that encourage widespread use and extension of the Werner dune model for research and training purposes. By lowering barriers for researchers to develop and test hypotheses about aeolian dune and dune field patterns, this release addresses recent calls to improve access to earth surface models.

  8. Hydrogeochemical evaluation for Simpevarp model version 1.2. Preliminary site description of the Simpevarp area

    Energy Technology Data Exchange (ETDEWEB)

    Laaksoharju, Marcus (ed.) [Geopoint AB, Stockholm (Sweden)

    2004-12-01

    Siting studies for SKB's programme of deep geological disposal of nuclear fuel waste currently involves the investigation of two locations, Simpevarp and Forsmark, to determine their geological, hydrogeochemical and hydrogeological characteristics. Present work completed has resulted in Model version 1.2 which represents the second evaluation of the available Simpevarp groundwater analytical data collected up to April, 2004. The deepest fracture groundwater samples with sufficient analytical data reflected depths down to 1.7 km. Model version 1.2 focusses on geochemical and mixing processes affecting the groundwater composition in the uppermost part of the bedrock, down to repository levels, and eventually extending to 1000 m depth. The groundwater flow regimes at Laxemar/Simpevarp are considered local and extend down to depths of around 600-1000 m depending on local topography. The marked differences in the groundwater flow regimes between Laxemar and Simpevarp are reflected in the groundwater chemistry where four major hydrochemical groups of groundwaters (types A-D) have been identified: TYPE A: This type comprises dilute groundwaters (< 1000 mg/L Cl; 0.5-2.0 g/L TDS) of Na-HCO{sub 3} type present at shallow (<200 m) depths at Simpevarp, but at greater depths (0-900 m) at Laxemar. At both localities the groundwaters are marginally oxidising close to the surface, but otherwise reducing. Main reactions involve weathering, ion exchange (Ca, Mg), surface complexation, and dissolution of calcite. Redox reactions include precipitation of Fe-oxyhydroxides and some microbially mediated reactions (SRB). Meteoric recharge water is mainly present at Laxemar whilst at Simpevarp potential mixing of recharge meteoric water and a modern sea component is observed. Localised mixing of meteoric water with deeper saline groundwaters is indicated at both Laxemar and Simpevarp. TYPE B: This type comprises brackish groundwaters (1000-6000 mg/L Cl; 5-10 g/L TDS) present at

  9. Thermal modelling. Preliminary site description. Forsmark area - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Sundberg, Jan; Back, Paer-Erik; Bengtsson, Anna; Laendell, Maerta [Geo Innova AB, Linkoeping (Sweden)

    2005-08-01

    This report presents the thermal site descriptive model for the Forsmark area, version 1.2. The main objective of this report is to present the thermal modelling work where data has been identified, quality controlled, evaluated and summarised in order to make an upscaling to lithological domain level possible. The thermal conductivity at canister scale has been modelled for two different lithological domains (RFM029 and RFM012, both dominated by granite to granodiorite (101057)). A main modelling approach has been used to determine the mean value of the thermal conductivity. Two alternative/complementary approaches have been used to evaluate the spatial variability of the thermal conductivity at domain level. The thermal modelling approaches are based on the lithological model for the Forsmark area, version 1.2 together with rock type models constituted from measured and calculated (from mineral composition) thermal conductivities. Results indicate that the mean of thermal conductivity is expected to exhibit a small variation between the different domains, 3.46 W/(mxK) for RFM012 to 3.55 W/(mxK) for RFM029. The spatial distribution of the thermal conductivity does not follow a simple model. Lower and upper 95% confidence limits are based on the modelling results, but have been rounded of to only two significant figures. Consequently, the lower limit is 2.9 W/(mxK), while the upper is 3.8 W/(mxK). This is applicable to both the investigated domains. The temperature dependence is rather small with a decrease in thermal conductivity of 10.0% per 100 deg C increase in temperature for the dominating rock type. There are a number of important uncertainties associated with these results. One of the uncertainties considers the representative scale for the canister. Another important uncertainty is the methodological uncertainties associated with the upscaling of thermal conductivity from cm-scale to canister scale. In addition, the representativeness of rock samples is

  10. Modelization of a water tank including a PCM module

    Energy Technology Data Exchange (ETDEWEB)

    Ibanez, Manuel [Dept. de Medi Ambient i Ciencies del Sol, Universitat de Lleida, Rovira Roure 191, 25198 Lleida (Spain); Cabeza, Luisa F.; Sole, Cristian; Roca, Joan; Nogues, Miquel [Dept. d' Informatica i Eng. Industrial, Universitat de Lleida, Jaume II 69, 25001 Lleida (Spain)

    2006-08-15

    The reduction of CO{sub 2} emissions is a key component for today's governments. Therefore, implementation of more and more systems with renewable energies is necessary. Solar systems for single family houses or residential buildings need a big water tank that many times is not easy to locate. This paper studies the modelization of a new technology where PCM modules are implemented in domestic hot water tanks to reduce their size without reducing the energy stored. A new TRNSYS component, based in the already existing TYPE 60, was developed, called TYPE 60PCM. After tuning the new component with experimental results, two more experiences were developed to validate the simulation of a water tank with two cylindrical PCM modules using type 60PCM, the cooldown and reheating experiments. Concordance between experimental and simulated data was very good. Since the new TRNSYS component was developed to simulate full solar systems, comparison of experimental results from a pilot plant solar system with simulations were performed, and they confirmed that the type 60PCM is a powerful tool to evaluate the performance of PCM modules in water tanks. (author)

  11. Incremental testing of the Community Multiscale Air Quality (CMAQ modeling system version 4.7

    Directory of Open Access Journals (Sweden)

    K. M. Foley

    2010-03-01

    Full Text Available This paper describes the scientific and structural updates to the latest release of the Community Multiscale Air Quality (CMAQ modeling system version 4.7 (v4.7 and points the reader to additional resources for further details. The model updates were evaluated relative to observations and results from previous model versions in a series of simulations conducted to incrementally assess the effect of each change. The focus of this paper is on five major scientific upgrades: (a updates to the heterogeneous N2O5 parameterization, (b improvement in the treatment of secondary organic aerosol (SOA, (c inclusion of dynamic mass transfer for coarse-mode aerosol, (d revisions to the cloud model, and (e new options for the calculation of photolysis rates. Incremental test simulations over the eastern United States during January and August 2006 are evaluated to assess the model response to each scientific improvement, providing explanations of differences in results between v4.7 and previously released CMAQ model versions. Particulate sulfate predictions are improved across all monitoring networks during both seasons due to cloud module updates. Numerous updates to the SOA module improve the simulation of seasonal variability and decrease the bias in organic carbon predictions at urban sites in the winter. Bias in the total mass of fine particulate matter (PM2.5 is dominated by overpredictions of unspeciated PM2.5 (PMother in the winter and by underpredictions of carbon in the summer. The CMAQv4.7 model results show slightly worse performance for ozone predictions. However, changes to the meteorological inputs are found to have a much greater impact on ozone predictions compared to changes to the CMAQ modules described here. Model updates had little effect on existing biases in wet deposition predictions.

  12. Incremental testing of the community multiscale air quality (CMAQ modeling system version 4.7

    Directory of Open Access Journals (Sweden)

    K. M. Foley

    2009-10-01

    Full Text Available This paper describes the scientific and structural updates to the latest release of the Community Multiscale Air Quality (CMAQ modeling system version 4.7 (v4.7 and points the reader to additional resources for further details. The model updates were evaluated relative to observations and results from previous model versions in a series of simulations conducted to incrementally assess the effect of each change. The focus of this paper is on five major scientific upgrades: (a updates to the heterogeneous N2O5 parameterization, (b improvement in the treatment of secondary organic aerosol (SOA, (c inclusion of dynamic mass transfer for coarse-mode aerosol, (d revisions to the cloud model, and (e new options for the calculation of photolysis rates. Incremental test simulations over the eastern United States during January and August 2006 are evaluated to assess the model response to each scientific improvement, providing explanations of differences in results between v4.7 and previously released CMAQ model versions. Particulate sulfate predictions are improved across all monitoring networks during both seasons due to cloud module updates. Numerous updates to the SOA module improve the simulation of seasonal variability and decrease the bias in organic carbon predictions at urban sites in the winter. Bias in the total mass of fine particulate matter (PM2.5 is dominated by overpredictions of unspeciated PM2.5 (PMother in the winter and by underpredictions of carbon in the summer. The CMAQ v4.7 model results show slightly worse performance for ozone predictions. However, changes to the meteorological inputs are found to have a much greater impact on ozone predictions compared to changes to the CMAQ modules described here. Model updates had little effect on existing biases in wet deposition predictions.

  13. Validation of the Japanese version of the Systemic Lupus Activity Questionnaire that includes physician-based assessments in a large observational cohort.

    Science.gov (United States)

    Okamoto, Y; Katsumata, Y; Baba, S; Kawaguchi, Y; Gono, T; Hanaoka, M; Kawasumi, H; Yamanaka, H

    2016-04-01

    The Systemic Lupus Activity Questionnaire (SLAQ) is a patient-reported outcome for systemic lupus erythematosus (SLE). We aimed to translate it into Japanese and further investigate its validity and reliability. The English version of the SLAQ was translated into Japanese and administered to Japanese SLE patients at our university clinic. Physicians assessed disease activity using the SLE Disease Activity Index 2000 (SLEDAI-2K). The patients were prospectively followed for repeat assessment a year later. Ultimately, 255 patients participated. The patients' 10-point ratings of disease activity and SLAQ scores were significantly correlated (Spearman's ρ = 0.53). The SLAQ score was weakly correlated with the SLE Disease Activity Index 2000 (SLEDAI-2K)-nolab (omitting laboratory items; ρ = 0.18) but not with the SLEDAI-2K (ρ = 0.02). These results suggested its convergent and discriminant validity. The SLAQ demonstrated acceptable internal consistency (Cronbach's α = 0.80), and good test-retest reliability (intraclass correlation coefficient = 0.85). The effect sizes and the standardized response means of the SLAQ were as follows: clinical worsening, 0.26 and 0.31, and improvement, -0.39 and -0.41, respectively, which indicated a small but significant responsiveness. The Japanese version of the SLAQ demonstrated acceptable reliability and validity; its performance was comparable to that of the original version. © The Author(s) 2015.

  14. A computationally efficient description of heterogeneous freezing: A simplified version of the Soccer ball model

    Science.gov (United States)

    Niedermeier, Dennis; Ervens, Barbara; Clauss, Tina; Voigtländer, Jens; Wex, Heike; Hartmann, Susan; Stratmann, Frank

    2014-01-01

    In a recent study, the Soccer ball model (SBM) was introduced for modeling and/or parameterizing heterogeneous ice nucleation processes. The model applies classical nucleation theory. It allows for a consistent description of both apparently singular and stochastic ice nucleation behavior, by distributing contact angles over the nucleation sites of a particle population assuming a Gaussian probability density function. The original SBM utilizes the Monte Carlo technique, which hampers its usage in atmospheric models, as fairly time-consuming calculations must be performed to obtain statistically significant results. Thus, we have developed a simplified and computationally more efficient version of the SBM. We successfully used the new SBM to parameterize experimental nucleation data of, e.g., bacterial ice nucleation. Both SBMs give identical results; however, the new model is computationally less expensive as confirmed by cloud parcel simulations. Therefore, it is a suitable tool for describing heterogeneous ice nucleation processes in atmospheric models.

  15. Community Land Model Version 3.0 (CLM3.0) Developer's Guide

    Energy Technology Data Exchange (ETDEWEB)

    Hoffman, FM

    2004-12-21

    This document describes the guidelines adopted for software development of the Community Land Model (CLM) and serves as a reference to the entire code base of the released version of the model. The version of the code described here is Version 3.0 which was released in the summer of 2004. This document, the Community Land Model Version 3.0 (CLM3.0) User's Guide (Vertenstein et al., 2004), the Technical Description of the Community Land Model (CLM) (Oleson et al., 2004), and the Community Land Model's Dynamic Global Vegetation Model (CLM-DGVM): Technical Description and User's Guide (Levis et al., 2004) provide the developer, user, or researcher with details of implementation, instructions for using the model, a scientific description of the model, and a scientific description of the Dynamic Global Vegetation Model integrated with CLM respectively. The CLM is a single column (snow-soil-vegetation) biogeophysical model of the land surface which can be run serially (on a laptop or personal computer) or in parallel (using distributed or shared memory processors or both) on both vector and scalar computer architectures. Written in Fortran 90, CLM can be run offline (i.e., run in isolation using stored atmospheric forcing data), coupled to an atmospheric model (e.g., the Community Atmosphere Model (CAM)), or coupled to a climate system model (e.g., the Community Climate System Model Version 3 (CCSM3)) through a flux coupler (e.g., Coupler 6 (CPL6)). When coupled, CLM exchanges fluxes of energy, water, and momentum with the atmosphere. The horizontal land surface heterogeneity is represented by a nested subgrid hierarchy composed of gridcells, landunits, columns, and plant functional types (PFTs). This hierarchical representation is reflected in the data structures used by the model code. Biophysical processes are simulated for each subgrid unit (landunit, column, and PFT) independently, and prognostic variables are maintained for each subgrid unit

  16. Statistical model of fractures and deformation zones. Preliminary site description, Laxemar subarea, version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Hermanson, Jan; Forssberg, Ola [Golder Associates AB, Stockholm (Sweden); Fox, Aaron; La Pointe, Paul [Golder Associates Inc., Redmond, WA (United States)

    2005-10-15

    The goal of this summary report is to document the data sources, software tools, experimental methods, assumptions, and model parameters in the discrete-fracture network (DFN) model for the local model volume in Laxemar, version 1.2. The model parameters presented herein are intended for use by other project modeling teams. Individual modeling teams may elect to simplify or use only a portion of the DFN model, depending on their needs. This model is not intended to be a flow model or a mechanical model; as such, only the geometrical characterization is presented. The derivations of the hydraulic or mechanical properties of the fractures or their subsurface connectivities are not within the scope of this report. This model represents analyses carried out on particular data sets. If additional data are obtained, or values for existing data are changed or excluded, the conclusions reached in this report, and the parameter values calculated, may change as well. The model volume is divided into two subareas; one located on the Simpevarp peninsula adjacent to the power plant (Simpevarp), and one further to the west (Laxemar). The DFN parameters described in this report were determined by analysis of data collected within the local model volume. As such, the final DFN model is only valid within this local model volume and the modeling subareas (Laxemar and Simpevarp) within.

  17. Evaluation of the tropospheric aerosol number concentrations simulated by two versions of the global model ECHAM5-HAM

    Science.gov (United States)

    Zhang, K.; Kazil, J.; Feichter, J.

    2009-04-01

    Since its first version developed by Stier et al. (2005), the global aerosol-climate model ECHAM5-HAM has gone through further development and updates. The changes in the model include (1) a new time integration scheme for the condensation of the sulfuric acid gas on existing particles, (2) a new aerosol nucleation scheme that takes into account the charged nucleation caused by cosmic rays, and (3) a parameterization scheme explicitly describing the conversion of aerosol particles to cloud nuclei. In this work, simulations performed with the old and new model versions are evaluated against some measurements reported in recent years. The focus is on the aerosol size distribution in the troposphere. Results show that modifications in the parameterizations have led to significant changes in the simulated aerosol concentrations. Vertical profiles of the total particle number concentration (diameter > 3nm) compiled by Clarke et al. (2002) suggest that, over the Pacific in the upper free troposphere, the tropics are associated with much higher concentrations than the mid-latitude regions. This feature is more reasonably reproduced by the new model version, mainly due to the improved results of the nucleation mode aerosols. In the lower levels (2-5 km above the Earth's surface), the number concentrations of the Aitken mode particles are overestimated compared to both the Pacific data given in Clarke et al. (2002) and the vertical profiles over Europe reported by Petzold et al. (2007). The physical and chemical processes that have led to these changes are identified by sensitivity tests. References: Clarke and Kapustin: A Pacific aerosol survey - part 1: a decade of data on production, transport, evolution and mixing in the troposphere, J. Atmos. Sci., 59, 363-382, 2002. Petzold et al.: Perturbation of the European free troposphere aerosol by North American forest fire plumes during the ICARTT-ITOP experiment in summer 2004, Atmos. Chem. Phys., 7, 5105-5127, 2007

  18. Aerosol specification in single-column Community Atmosphere Model version 5

    Science.gov (United States)

    Lebassi-Habtezion, B.; Caldwell, P. M.

    2015-03-01

    Single-column model (SCM) capability is an important tool for general circulation model development. In this study, the SCM mode of version 5 of the Community Atmosphere Model (CAM5) is shown to handle aerosol initialization and advection improperly, resulting in aerosol, cloud-droplet, and ice crystal concentrations which are typically much lower than observed or simulated by CAM5 in global mode. This deficiency has a major impact on stratiform cloud simulations but has little impact on convective case studies because aerosol is currently not used by CAM5 convective schemes and convective cases are typically longer in duration (so initialization is less important). By imposing fixed aerosol or cloud-droplet and crystal number concentrations, the aerosol issues described above can be avoided. Sensitivity studies using these idealizations suggest that the Meyers et al. (1992) ice nucleation scheme prevents mixed-phase cloud from existing by producing too many ice crystals. Microphysics is shown to strongly deplete cloud water in stratiform cases, indicating problems with sequential splitting in CAM5 and the need for careful interpretation of output from sequentially split climate models. Droplet concentration in the general circulation model (GCM) version of CAM5 is also shown to be far too low (~ 25 cm-3) at the southern Great Plains (SGP) Atmospheric Radiation Measurement (ARM) site.

  19. MESOI Version 2. 0: an interactive mesoscale Lagrangian puff dispersion model with deposition and decay

    Energy Technology Data Exchange (ETDEWEB)

    Ramsdell, J.V.; Athey, G.F.; Glantz, C.S.

    1983-11-01

    MESOI Version 2.0 is an interactive Lagrangian puff model for estimating the transport, diffusion, deposition and decay of effluents released to the atmosphere. The model is capable of treating simultaneous releases from as many as four release points, which may be elevated or at ground-level. The puffs are advected by a horizontal wind field that is defined in three dimensions. The wind field may be adjusted for expected topographic effects. The concentration distribution within the puffs is initially assumed to be Gaussian in the horizontal and vertical. However, the vertical concentration distribution is modified by assuming reflection at the ground and the top of the atmospheric mixing layer. Material is deposited on the surface using a source depletion, dry deposition model and a washout coefficient model. The model also treats the decay of a primary effluent species and the ingrowth and decay of a single daughter species using a first order decay process. This report is divided into two parts. The first part discusses the theoretical and mathematical bases upon which MESOI Version 2.0 is based. The second part contains the MESOI computer code. The programs were written in the ANSI standard FORTRAN 77 and were developed on a VAX 11/780 computer. 43 references, 14 figures, 13 tables.

  20. A p-version embedded model for simulation of concrete temperature fields with cooling pipes

    Directory of Open Access Journals (Sweden)

    Sheng Qiang

    2015-07-01

    Full Text Available Pipe cooling is an effective method of mass concrete temperature control, but its accurate and convenient numerical simulation is still a cumbersome problem. An improved embedded model, considering the water temperature variation along the pipe, was proposed for simulating the temperature field of early-age concrete structures containing cooling pipes. The improved model was verified with an engineering example. Then, the p-version self-adaption algorithm for the improved embedded model was deduced, and the initial values and boundary conditions were examined. Comparison of some numerical samples shows that the proposed model can provide satisfying precision and a higher efficiency. The analysis efficiency can be doubled at the same precision, even for a large-scale element. The p-version algorithm can fit grids of different sizes for the temperature field simulation. The convenience of the proposed algorithm lies in the possibility of locating more pipe segments in one element without the need of so regular a shape as in the explicit model.

  1. Simulations of the mid-Pliocene Warm Period using two versions of the NASA/GISS ModelE2-R Coupled Model

    Directory of Open Access Journals (Sweden)

    M. A. Chandler

    2013-04-01

    Full Text Available The mid-Pliocene Warm Period (mPWP bears many similarities to aspects of future global warming as projected by the Intergovernmental Panel on Climate Change (IPCC, 2007. Both marine and terrestrial data point to high-latitude temperature amplification, including large decreases in sea ice and land ice, as well as expansion of warmer climate biomes into higher latitudes. Here we present our most recent simulations of the mid-Pliocene climate using the CMIP5 version of the NASA/GISS Earth System Model (ModelE2-R. We describe the substantial impact associated with a recent correction made in the implementation of the Gent-McWilliams ocean mixing scheme (GM, which has a large effect on the simulation of ocean surface temperatures, particularly in the North Atlantic Ocean. The effect of this correction on the Pliocene climate results would not have been easily determined from examining its impact on the preindustrial runs alone, a useful demonstration of how the consequences of code improvements as seen in modern climate control runs do not necessarily portend the impacts in extreme climates. Both the GM-corrected and GM-uncorrected simulations were contributed to the Pliocene Model Intercomparison Project (PlioMIP Experiment 2. Many findings presented here corroborate results from other PlioMIP multi-model ensemble papers, but we also emphasise features in the ModelE2-R simulations that are unlike the ensemble means. The corrected version yields results that more closely resemble the ocean core data as well as the PRISM3D reconstructions of the mid-Pliocene, especially the dramatic warming in the North Atlantic and Greenland-Iceland-Norwegian Sea, which in the new simulation appears to be far more realistic than previously found with older versions of the GISS model. Our belief is that continued development of key physical routines in the atmospheric model, along with higher resolution and recent corrections to mixing parameterisations in the ocean

  2. Application of a short-time version of the Equalization-Cancellation model to speech intelligibility experiments with speech maskers.

    Science.gov (United States)

    Wan, Rui; Durlach, Nathaniel I; Colburn, H Steven

    2014-08-01

    A short-time-processing version of the Equalization-Cancellation (EC) model of binaural processing is described and applied to speech intelligibility tasks in the presence of multiple maskers, including multiple speech maskers. This short-time EC model, called the STEC model, extends the model described by Wan et al. [J. Acoust. Soc. Am. 128, 3678-3690 (2010)] to allow the EC model's equalization parameters τ and α to be adjusted as a function of time, resulting in improved masker cancellation when the dominant masker location varies in time. Using the Speech Intelligibility Index, the STEC model is applied to speech intelligibility with maskers that vary in number, type, and spatial arrangements. Most notably, when maskers are located on opposite sides of the target, this STEC model predicts improved thresholds when the maskers are modulated independently with speech-envelope modulators; this includes the most relevant case of independent speech maskers. The STEC model describes the spatial dependence of the speech reception threshold with speech maskers better than the steady-state model. Predictions are also improved for independently speech-modulated noise maskers but are poorer for reversed-speech maskers. In general, short-term processing is useful, but much remains to be done in the complex task of understanding speech in speech maskers.

  3. Update of the Polar SWIFT model for polar stratospheric ozone loss (Polar SWIFT version 2

    Directory of Open Access Journals (Sweden)

    I. Wohltmann

    2017-07-01

    Full Text Available The Polar SWIFT model is a fast scheme for calculating the chemistry of stratospheric ozone depletion in polar winter. It is intended for use in global climate models (GCMs and Earth system models (ESMs to enable the simulation of mutual interactions between the ozone layer and climate. To date, climate models often use prescribed ozone fields, since a full stratospheric chemistry scheme is computationally very expensive. Polar SWIFT is based on a set of coupled differential equations, which simulate the polar vortex-averaged mixing ratios of the key species involved in polar ozone depletion on a given vertical level. These species are O3, chemically active chlorine (ClOx, HCl, ClONO2 and HNO3. The only external input parameters that drive the model are the fraction of the polar vortex in sunlight and the fraction of the polar vortex below the temperatures necessary for the formation of polar stratospheric clouds. Here, we present an update of the Polar SWIFT model introducing several improvements over the original model formulation. In particular, the model is now trained on vortex-averaged reaction rates of the ATLAS Chemistry and Transport Model, which enables a detailed look at individual processes and an independent validation of the different parameterizations contained in the differential equations. The training of the original Polar SWIFT model was based on fitting complete model runs to satellite observations and did not allow for this. A revised formulation of the system of differential equations is developed, which closely fits vortex-averaged reaction rates from ATLAS that represent the main chemical processes influencing ozone. In addition, a parameterization for the HNO3 change by denitrification is included. The rates of change of the concentrations of the chemical species of the Polar SWIFT model are purely chemical rates of change in the new version, whereas in the original Polar SWIFT model, they included a transport effect

  4. Technical note: The Lagrangian particle dispersion model FLEXPART version 6.2

    Directory of Open Access Journals (Sweden)

    A. Stohl

    2005-01-01

    Full Text Available The Lagrangian particle dispersion model FLEXPART was originally (about 8 years ago designed for calculating the long-range and mesoscale dispersion of air pollutants from point sources, such as after an accident in a nuclear power plant. In the meantime FLEXPART has evolved into a comprehensive tool for atmospheric transport modeling and analysis. Its application fields were extended from air pollution studies to other topics where atmospheric transport plays a role (e.g., exchange between the stratosphere and troposphere, or the global water cycle. It has evolved into a true community model that is now being used by at least 25 groups from 14 different countries and is seeing both operational and research applications. A user manual has been kept actual over the years and was distributed over an internet page along with the model's source code. In this note we provide a citeable technical description of FLEXPART's latest version (6.2.

  5. Muninn: A versioning flash key-value store using an object-based storage model

    OpenAIRE

    Kang, Y.; Pitchumani, R; Marlette, T; Miller, El

    2014-01-01

    While non-volatile memory (NVRAM) devices have the po-tential to alleviate the trade-off between performance, scal-ability, and energy in storage and memory subsystems, a block interface and storage subsystems designed for slow I/O devices make it difficult to efficiently exploit NVRAMs in a portable and extensible way. We propose an object-based storage model as a way of addressing the shortfalls of the current interfaces. Through the design of Muninn, an object-based versioning key-value st...

  6. QMM – A Quarterly Macroeconomic Model of the Icelandic Economy. Version 2.0

    DEFF Research Database (Denmark)

    Ólafsson, Tjörvi

    This paper documents and describes Version 2.0 of the Quarterly Macroeconomic Model of the Central Bank of Iceland (QMM). QMM and the underlying quarterly database have been under construction since 2001 at the Research and Forecasting Division of the Economics Department at the Bank and was first...... implemented in the forecasting round for the Monetary Bulletin 2006/1 in March 2006. QMM is used by the Bank for forecasting and various policy simulations and therefore plays a key role as an organisational framework for viewing the medium-term future when formulating monetary policy at the Bank. This paper...

  7. User’s Manual for the Navy Coastal Ocean Model (NCOM) Version 4.0

    Science.gov (United States)

    2009-02-06

    Manual for the Navy Coastal Ocean Model (NCOM) Version 4.0 Paul J. Martin Charlie n. Barron luCy F. SMedStad tiMothy J. CaMPBell alan J. WallCraFt...Timothy J. Campbell, Alan J. Wallcraft, Robert C. Rhodes, Clark Rowley, Tamara L. Townsend, and Suzanne N. Carroll* Naval Research Laboratory...1997- 1998 ENSO event. Bound.-Layer Meteor. 103: 439-458. Large, W.G., J.C. McWilliams , and S. Doney, (1994). Oceanic vertical mixing: a review and

  8. Navy Coastal Ocean Model (NCOM) Version 4.0 (User’s Manual)

    Science.gov (United States)

    2009-02-06

    Manual for the Navy Coastal Ocean Model (NCOM) Version 4.0 Paul J. Martin Charlie n. Barron luCy F. SMedStad tiMothy J. CaMPBell alan J. WallCraFt...Timothy J. Campbell, Alan J. Wallcraft, Robert C. Rhodes, Clark Rowley, Tamara L. Townsend, and Suzanne N. Carroll* Naval Research Laboratory...the 1997- 1998 ENSO event. Bound.-Layer Meteor. 103: 439-458. Large, W.G., J.C. McWilliams , and S. Doney, (1994). Oceanic vertical mixing: a review

  9. QMM – A Quarterly Macroeconomic Model of the Icelandic Economy. Version 2.0

    DEFF Research Database (Denmark)

    Ólafsson, Tjörvi

    This paper documents and describes Version 2.0 of the Quarterly Macroeconomic Model of the Central Bank of Iceland (QMM). QMM and the underlying quarterly database have been under construction since 2001 at the Research and Forecasting Division of the Economics Department at the Bank and was first...... implemented in the forecasting round for the Monetary Bulletin 2006/1 in March 2006. QMM is used by the Bank for forecasting and various policy simulations and therefore plays a key role as an organisational framework for viewing the medium-term future when formulating monetary policy at the Bank. This paper...

  10. Flood predictions using the parallel version of distributed numerical physical rainfall-runoff model TOPKAPI

    Science.gov (United States)

    Boyko, Oleksiy; Zheleznyak, Mark

    2015-04-01

    The original numerical code TOPKAPI-IMMS of the distributed rainfall-runoff model TOPKAPI ( Todini et al, 1996-2014) is developed and implemented in Ukraine. The parallel version of the code has been developed recently to be used on multiprocessors systems - multicore/processors PC and clusters. Algorithm is based on binary-tree decomposition of the watershed for the balancing of the amount of computation for all processors/cores. Message passing interface (MPI) protocol is used as a parallel computing framework. The numerical efficiency of the parallelization algorithms is demonstrated for the case studies for the flood predictions of the mountain watersheds of the Ukrainian Carpathian regions. The modeling results is compared with the predictions based on the lumped parameters models.

  11. The Digital Astronaut Project Computational Bone Remodeling Model (Beta Version) Bone Summit Summary Report

    Science.gov (United States)

    Pennline, James; Mulugeta, Lealem

    2013-01-01

    Under the conditions of microgravity, astronauts lose bone mass at a rate of 1% to 2% a month, particularly in the lower extremities such as the proximal femur [1-3]. The most commonly used countermeasure against bone loss in microgravity has been prescribed exercise [4]. However, data has shown that existing exercise countermeasures are not as effective as desired for preventing bone loss in long duration, 4 to 6 months, spaceflight [1,3,5,6]. This spaceflight related bone loss may cause early onset of osteoporosis to place the astronauts at greater risk of fracture later in their lives. Consequently, NASA seeks to have improved understanding of the mechanisms of bone demineralization in microgravity in order to appropriately quantify this risk, and to establish appropriate countermeasures [7]. In this light, NASA's Digital Astronaut Project (DAP) is working with the NASA Bone Discipline Lead to implement well-validated computational models to help predict and assess bone loss during spaceflight, and enhance exercise countermeasure development. More specifically, computational modeling is proposed as a way to augment bone research and exercise countermeasure development to target weight-bearing skeletal sites that are most susceptible to bone loss in microgravity, and thus at higher risk for fracture. Given that hip fractures can be debilitating, the initial model development focused on the femoral neck. Future efforts will focus on including other key load bearing bone sites such as the greater trochanter, lower lumbar, proximal femur and calcaneus. The DAP has currently established an initial model (Beta Version) of bone loss due to skeletal unloading in femoral neck region. The model calculates changes in mineralized volume fraction of bone in this segment and relates it to changes in bone mineral density (vBMD) measured by Quantitative Computed Tomography (QCT). The model is governed by equations describing changes in bone volume fraction (BVF), and rates of

  12. The Model of Emissions of Gases and Aerosols from Nature version 2.1 (MEGAN2.1: an extended and updated framework for modeling biogenic emissions

    Directory of Open Access Journals (Sweden)

    A. B. Guenther

    2012-06-01

    Full Text Available The Model of Emissions of Gases and Aerosols from Nature version 2.1 (MEGAN2.1 is a modeling framework for estimating fluxes of 147 biogenic compounds between terrestrial ecosystems and the atmosphere using simple mechanistic algorithms to account for the major known processes controlling biogenic emissions. It is available as an offline code and has also been coupled into land surface models and atmospheric chemistry models. MEGAN2.1 is an update from the previous versions including MEGAN2.0 for isoprene emissions and MEGAN2.04, which estimates emissions of 138 compounds. Isoprene comprises about half of the estimated total global biogenic volatile organic compound (BVOC emission of 1 Pg (1000 Tg or 1015 g. Another 10 compounds including methanol, ethanol, acetaldehyde, acetone, α-pinene, β-pinene, t−β-ocimene, limonene, ethene, and propene together contribute another 30% of the estimated emission. An additional 20 compounds (mostly terpenoids are associated with another 17% of the total emission with the remaining 3% distributed among 125 compounds. Emissions of 41 monoterpenes and 32 sesquiterpenes together comprise about 15% and 3%, respectively, of the total global BVOC emission. Tropical trees cover about 18% of the global land surface and are estimated to be responsible for 60% of terpenoid emissions and 48% of other VOC emissions. Other trees cover about the same area but are estimated to contribute only about 10% of total emissions. The magnitude of the emissions estimated with MEGAN2.1 are within the range of estimates reported using other approaches and much of the differences between reported values can be attributed to landcover and meteorological driving variables. The offline version of MEGAN2.1 source code and driving variables is available from http://acd.ucar.edu/~guenther/MEGAN/MEGAN.htm and the version integrated into the

  13. The Systems Biology Markup Language (SBML) Level 3 Package: Qualitative Models, Version 1, Release 1.

    Science.gov (United States)

    Chaouiya, Claudine; Keating, Sarah M; Berenguier, Duncan; Naldi, Aurélien; Thieffry, Denis; van Iersel, Martijn P; Le Novère, Nicolas; Helikar, Tomáš

    2015-09-04

    Quantitative methods for modelling biological networks require an in-depth knowledge of the biochemical reactions and their stoichiometric and kinetic parameters. In many practical cases, this knowledge is missing. This has led to the development of several qualitative modelling methods using information such as, for example, gene expression data coming from functional genomic experiments. The SBML Level 3 Version 1 Core specification does not provide a mechanism for explicitly encoding qualitative models, but it does provide a mechanism for SBML packages to extend the Core specification and add additional syntactical constructs. The SBML Qualitative Models package for SBML Level 3 adds features so that qualitative models can be directly and explicitly encoded. The approach taken in this package is essentially based on the definition of regulatory or influence graphs. The SBML Qualitative Models package defines the structure and syntax necessary to describe qualitative models that associate discrete levels of activities with entity pools and the transitions between states that describe the processes involved. This is particularly suited to logical models (Boolean or multi-valued) and some classes of Petri net models can be encoded with the approach.

  14. Landfill Gas Energy Cost Model Version 3.0 (LFGcost-Web V3 ...

    Science.gov (United States)

    To help stakeholders estimate the costs of a landfill gas (LFG) energy project, in 2002, LMOP developed a cost tool (LFGcost). Since then, LMOP has routinely updated the tool to reflect changes in the LFG energy industry. Initially the model was designed for EPA to assist landfills in evaluating the economic and financial feasibility of LFG energy project development. In 2014, LMOP developed a public version of the model, LFGcost-Web (Version 3.0), to allow landfill and industry stakeholders to evaluate project feasibility on their own. LFGcost-Web can analyze costs for 12 energy recovery project types. These project costs can be estimated with or without the costs of a gas collection and control system (GCCS). The EPA used select equations from LFGcost-Web to estimate costs of the regulatory options in the 2015 proposed revisions to the MSW Landfills Standards of Performance (also known as New Source Performance Standards) and the Emission Guidelines (herein thereafter referred to collectively as the Landfill Rules). More specifically, equations derived from LFGcost-Web were applied to each landfill expected to be impacted by the Landfill Rules to estimate annualized installed capital costs and annual O&M costs of a gas collection and control system. In addition, after applying the LFGcost-Web equations to the list of landfills expected to require a GCCS in year 2025 as a result of the proposed Landfill Rules, the regulatory analysis evaluated whether electr

  15. Version 3.0 of code Java for 3D simulation of the CCA model

    Science.gov (United States)

    Zhang, Kebo; Zuo, Junsen; Dou, Yifeng; Li, Chao; Xiong, Hailing

    2016-10-01

    In this paper we provide a new version of program for replacing the previous version. The frequency of traversing the clusters-list was reduced, and some code blocks were optimized properly; in addition, we appended and revised the comments of the source code for some methods or attributes. The compared experimental results show that new version has better time efficiency than the previous version.

  16. Integrated Medical Model (IMM) Optimization Version 4.0 Functional Improvements

    Science.gov (United States)

    Arellano, John; Young, M.; Boley, L.; Garcia, Y.; Saile, L.; Walton, M.; Kerstman, E.; Reyes, D.; Goodenow, D. A.; Myers, J. G.

    2016-01-01

    The IMMs ability to assess mission outcome risk levels relative to available resources provides a unique capability to provide guidance on optimal operational medical kit and vehicle resources. Post-processing optimization allows IMM to optimize essential resources to improve a specific model outcome such as maximization of the Crew Health Index (CHI), or minimization of the probability of evacuation (EVAC) or the loss of crew life (LOCL). Mass and or volume constrain the optimized resource set. The IMMs probabilistic simulation uses input data on one hundred medical conditions to simulate medical events that may occur in spaceflight, the resources required to treat those events, and the resulting impact to the mission based on specific crew and mission characteristics. Because IMM version 4.0 provides for partial treatment for medical events, IMM Optimization 4.0 scores resources at the individual resource unit increment level as opposed to the full condition-specific treatment set level, as done in version 3.0. This allows the inclusion of as many resources as possible in the event that an entire set of resources called out for treatment cannot satisfy the constraints. IMM Optimization version 4.0 adds capabilities that increase efficiency by creating multiple resource sets based on differing constraints and priorities, CHI, EVAC, or LOCL. It also provides sets of resources that improve mission-related IMM v4.0 outputs with improved performance compared to the prior optimization. The new optimization represents much improved fidelity that will improve the utility of the IMM 4.0 for decision support.

  17. BALANCED SCORECARDS EVALUATION MODEL THAT INCLUDES ELEMENTS OF ENVIRONMENTAL MANAGEMENT SYSTEM USING AHP MODEL

    Directory of Open Access Journals (Sweden)

    Jelena Jovanović

    2010-03-01

    Full Text Available The research is oriented on improvement of environmental management system (EMS using BSC (Balanced Scorecard model that presents strategic model of measurem ents and improvement of organisational performance. The research will present approach of objectives and environmental management me trics involvement (proposed by literature review in conventional BSC in "Ad Barska plovi dba" organisation. Further we will test creation of ECO-BSC model based on business activities of non-profit organisations in order to improve envir onmental management system in parallel with other systems of management. Using this approach we may obtain 4 models of BSC that includ es elements of environmen tal management system for AD "Barska plovidba". Taking into acc ount that implementation and evaluation need long period of time in AD "Barska plovidba", the final choice will be based on 14598 (Information technology - Software product evaluation and ISO 9126 (Software engineering - Product quality using AHP method. Those standards are usually used for evaluation of quality software product and computer programs that serve in organisation as support and factors for development. So, AHP model will be bas ed on evolution criteria based on suggestion of ISO 9126 standards and types of evaluation from two evaluation teams. Members of team & will be experts in BSC and environmental management system that are not em ployed in AD "Barska Plovidba" organisation. The members of team 2 will be managers of AD "Barska Plovidba" organisation (including manage rs from environmental department. Merging results based on previously cr eated two AHP models, one can obtain the most appropriate BSC that includes elements of environmental management system. The chosen model will present at the same time suggestion for approach choice including ecological metrics in conventional BSC model for firm that has at least one ECO strategic orientation.

  18. APPLICATION OF TWO VERSIONS OF A RNG BASED k-ε MODEL TO NUMERICAL SIMULATIONS OF TURBULENT IMPINGING JET FLOW

    Institute of Scientific and Technical Information of China (English)

    Chen Qing-guang; Xu Zhong; Zhang Yong-jian

    2003-01-01

    Two independent versions of the RNG based k-ε turbulence model in conjunction with the law of the wall have been applied to the numerical simulation of an axisymmetric turbulent impinging jet flow field. The two model predictions are compared with those of the standard k-ε model and with the experimental data measured by LDV (Laser Doppler Velocimetry). It shows that the original version of the RNG k-ε model with the choice of Cε1=1.063 can not yield good results, among them the predicted turbulent kinetic energy profiles in the vicinity of the stagnation region are even worse than those predicted by the standard k-ε model. However, the new version of RNG k-ε model behaves well. This is mainly due to the corrections to the constants Cε1 and Cε2 along with a modification of the production term to account for non-equilibrium strain rates in the flow.

  19. Exact solution for a metapopulation version of Schelling’s model

    Science.gov (United States)

    Durrett, Richard; Zhang, Yuan

    2014-01-01

    In 1971, Schelling introduced a model in which families move if they have too many neighbors of the opposite type. In this paper, we will consider a metapopulation version of the model in which a city is divided into N neighborhoods, each of which has L houses. There are ρNL red families and ρNL blue families for some ρ ρb, a new segregated equilibrium appears; for ρb < ρ < ρd, there is bistability, but when ρ increases past ρd the random state is no longer stable. When ρc is small enough, the random state will again be the stationary distribution when ρ is close to 1/2. If so, this is preceded by a region of bistability. PMID:25225367

  20. Validity study of the Beck Anxiety Inventory (Portuguese version by the Rasch Rating Scale model

    Directory of Open Access Journals (Sweden)

    Sónia Quintão

    2013-01-01

    Full Text Available Our objective was to conduct a validation study of the Portuguese version of the Beck Anxiety Inventory (BAI by means of the Rasch Rating Scale Model, and then compare it with the most used scales of anxiety in Portugal. The sample consisted of 1,160 adults (427 men and 733 women, aged 18-82 years old (M=33.39; SD=11.85. Instruments were Beck Anxiety Inventory, State-Trait Anxiety Inventory and Zung Self-Rating Anxiety Scale. It was found that Beck Anxiety Inventory's system of four categories, the data-model fit, and people reliability were adequate. The measure can be considered as unidimensional. Gender and age-related differences were not a threat to the validity. BAI correlated significantly with other anxiety measures. In conclusion, BAI shows good psychometric quality.

  1. Immersion freezing by natural dust based on a soccer ball model with the Community Atmospheric Model version 5: climate effects

    Science.gov (United States)

    Wang, Yong; Liu, Xiaohong

    2014-12-01

    We introduce a simplified version of the soccer ball model (SBM) developed by Niedermeier et al (2014 Geophys. Res. Lett. 41 736-741) into the Community Atmospheric Model version 5 (CAM5). It is the first time that SBM is used in an atmospheric model to parameterize the heterogeneous ice nucleation. The SBM, which was simplified for its suitable application in atmospheric models, uses the classical nucleation theory to describe the immersion/condensation freezing by dust in the mixed-phase cloud regime. Uncertain parameters (mean contact angle, standard deviation of contact angle probability distribution, and number of surface sites) in the SBM are constrained by fitting them to recent natural dust (Saharan dust) datasets. With the SBM in CAM5, we investigate the sensitivity of modeled cloud properties to the SBM parameters, and find significant seasonal and regional differences in the sensitivity among the three SBM parameters. Changes of mean contact angle and the number of surface sites lead to changes of cloud properties in Arctic in spring, which could be attributed to the transport of dust ice nuclei to this region. In winter, significant changes of cloud properties induced by these two parameters mainly occur in northern hemispheric mid-latitudes (e.g., East Asia). In comparison, no obvious changes of cloud properties caused by changes of standard deviation can be found in all the seasons. These results are valuable for understanding the heterogeneous ice nucleation behavior, and useful for guiding the future model developments.

  2. The Flexible Global Ocean-Atmosphere-Land System Model,Spectral Version 2:FGOALS-s2

    Institute of Scientific and Technical Information of China (English)

    BAO Qing; LIN Pengfei; ZHOU Tianjun; LIU Yimin; YU Yongqiang; WU Guoxiong; HE Bian

    2013-01-01

    The Flexible Global Ocean-Atmosphere-Land System model,Spectral Version 2 (FGOALS-s2) was used to simulate realistic climates and to study anthropogenic influences on climate change.Specifically,the FGOALS-s2 was integrated with Coupled Model Intercomparison Project Phase 5 (CMIP5) to conduct coordinated experiments that will provide valuable scientific information to climate research communities.The performances of FGOALS-s2 were assessed in simulating major climate phenomena,and documented both the strengths and weaknesses of the model.The results indicate that FGOALS-s2 successfully overcomes climate drift,and realistically models global and regional climate characteristics,including SST,precipitation,and atmospheric circulation.In particular,the model accurately captures annual and semi-annual SST cycles in the equatorial Pacific Ocean,and the main characteristic features of the Asian summer monsoon,which include a low-level southwestern jet and five monsoon rainfall centers.The simulated climate variability was further examined in terms of teleconnections,leading modes of global SST (namely,ENSO),Pacific Decadal Oscillations (PDO),and changes in 19th-20th century climate.The analysis demonstrates that FGOALS-s2 realistically simulates extra-tropical teleconnection patterns of large-scale climate,and irregular ENSO periods.The model gives fairly reasonable reconstructions of spatial patterns of PDO and global monsoon changes in the 20th century.However,because the indirect effects of aerosols are not included in the model,the simulated global temperature change during the period 1850-2005 is greater than the observed warming,by 0.6℃.Some other shortcomings of the model are also noted.

  3. Implementing and Evaluating Variable Soil Thickness in the Community Land Model, Version 4.5 (CLM4.5)

    Energy Technology Data Exchange (ETDEWEB)

    Brunke, Michael A.; Broxton, Patrick; Pelletier, Jon; Gochis, David; Hazenberg, Pieter; Lawrence, David M.; Leung, L. Ruby; Niu, Guo-Yue; Troch, Peter A.; Zeng, Xubin

    2016-05-01

    One of the recognized weaknesses of land surface models as used in weather and climate models is the assumption of constant soil thickness due to the lack of global estimates of bedrock depth. Using a 30 arcsecond global dataset for the thickness of relatively porous, unconsolidated sediments over bedrock, spatial variation in soil thickness is included here in version 4.5 of the Community Land Model (CLM4.5). The number of soil layers for each grid cell is determined from the average soil depth for each 0.9° latitude x 1.25° longitude grid cell. Including variable soil thickness affects the simulations most in regions with shallow bedrock corresponding predominantly to areas of mountainous terrain. The greatest changes are to baseflow, with the annual minimum generally occurring earlier, while smaller changes are seen in surface fluxes like latent heat flux and surface runoff in which only the annual cycle amplitude is increased. These changes are tied to soil moisture changes which are most substantial in locations with shallow bedrock. Total water storage (TWS) anomalies do not change much over most river basins around the globe, since most basins contain mostly deep soils. However, it was found that TWS anomalies substantially differ for a river basin with more mountainous terrain. Additionally, the annual cycle in soil temperature are affected by including realistic soil thicknesses due to changes to heat capacity and thermal conductivity.

  4. Temperature and Humidity Profiles in the TqJoint Data Group of AIRS Version 6 Product for the Climate Model Evaluation

    Science.gov (United States)

    Ding, Feng; Fang, Fan; Hearty, Thomas J.; Theobald, Michael; Vollmer, Bruce; Lynnes, Christopher

    2014-01-01

    The Atmospheric Infrared Sounder (AIRS) mission is entering its 13th year of global observations of the atmospheric state, including temperature and humidity profiles, outgoing long-wave radiation, cloud properties, and trace gases. Thus AIRS data have been widely used, among other things, for short-term climate research and observational component for model evaluation. One instance is the fifth phase of the Coupled Model Intercomparison Project (CMIP5) which uses AIRS version 5 data in the climate model evaluation. The NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) is the home of processing, archiving, and distribution services for data from the AIRS mission. The GES DISC, in collaboration with the AIRS Project, released data from the version 6 algorithm in early 2013. The new algorithm represents a significant improvement over previous versions in terms of greater stability, yield, and quality of products. The ongoing Earth System Grid for next generation climate model research project, a collaborative effort of GES DISC and NASA JPL, will bring temperature and humidity profiles from AIRS version 6. The AIRS version 6 product adds a new "TqJoint" data group, which contains data for a common set of observations across water vapor and temperature at all atmospheric levels and is suitable for climate process studies. How different may the monthly temperature and humidity profiles in "TqJoint" group be from the "Standard" group where temperature and water vapor are not always valid at the same time? This study aims to answer the question by comprehensively comparing the temperature and humidity profiles from the "TqJoint" group and the "Standard" group. The comparison includes mean differences at different levels globally and over land and ocean. We are also working on examining the sampling differences between the "TqJoint" and "Standard" group using MERRA data.

  5. A new version of the NeQuick ionosphere electron density model

    Science.gov (United States)

    Nava, B.; Coïsson, P.; Radicella, S. M.

    2008-12-01

    NeQuick is a three-dimensional and time dependent ionospheric electron density model developed at the Aeronomy and Radiopropagation Laboratory of the Abdus Salam International Centre for Theoretical Physics (ICTP), Trieste, Italy and at the Institute for Geophysics, Astrophysics and Meteorology of the University of Graz, Austria. It is a quick-run model particularly tailored for trans-ionospheric applications that allows one to calculate the electron concentration at any given location in the ionosphere and thus the total electron content (TEC) along any ground-to-satellite ray-path by means of numerical integration. Taking advantage of the increasing amount of available data, the model formulation is continuously updated to improve NeQuick capabilities to provide representations of the ionosphere at global scales. Recently, major changes have been introduced in the model topside formulation and important modifications have also been introduced in the bottomside description. In addition, specific revisions have been applied to the computer package associated to NeQuick in order to improve its computational efficiency. It has therefore been considered appropriate to finalize all the model developments in a new version of the NeQuick. In the present work the main features of NeQuick 2 are illustrated and some results related to validation tests are reported.

  6. Solid Waste Projection Model: Database User`s Guide. Version 1.4

    Energy Technology Data Exchange (ETDEWEB)

    Blackburn, C.L.

    1993-10-01

    The Solid Waste Projection Model (SWPM) system is an analytical tool developed by Pacific Northwest Laboratory (PNL) for Westinghouse Hanford Company (WHC) specifically to address Hanford solid waste management issues. This document is one of a set of documents supporting the SWPM system and providing instructions in the use and maintenance of SWPM components. This manual contains instructions for using Version 1.4 of the SWPM database: system requirements and preparation, entering and maintaining data, and performing routine database functions. This document supports only those operations which are specific to SWPM database menus and functions and does not Provide instruction in the use of Paradox, the database management system in which the SWPM database is established.

  7. Hydrogeochemical evaluation of the Forsmark site, model version 1.1

    Energy Technology Data Exchange (ETDEWEB)

    Laaksoharju, Marcus (ed.) [GeoPoint AB, Sollentuna (Sweden); Gimeno, Maria; Auque, Luis; Gomez, Javier [Univ. of Zaragoza (Spain). Dept. of Earth Sciences; Smellie, John [Conterra AB, Uppsala (Sweden); Tullborg, Eva-Lena [Terralogica AB, Graabo (Sweden); Gurban, Ioana [3D-Terra, Montreal (Canada)

    2004-01-01

    Siting studies for SKB's programme of deep geological disposal of nuclear fuel waste currently involves the investigation of two locations, Forsmark and Simpevarp, on the eastern coast of Sweden to determine their geological, geochemical and hydrogeological characteristics. Present work completed has resulted in model version 1.1 which represents the first evaluation of the available Forsmark groundwater analytical data collected up to May 1, 2003 (i.e. the first 'data freeze'). The HAG group had access to a total of 456 water samples collected mostly from the surface and sub-surface environment (e.g. soil pipes in the overburden, streams and lakes); only a few samples were collected from drilled boreholes. The deepest samples reflected depths down to 200 m. Furthermore, most of the waters sampled (74%) lacked crucial analytical information that restricted the evaluation. Consequently, model version 1.1 focussed on the processes taking place in the uppermost part of the bedrock rather than at repository levels. The complex groundwater evolution and patterns at Forsmark are a result of many factors such as: a) the flat topography and closeness to the Baltic Sea resulting in relative small hydrogeological driving forces which can preserve old water types from being flushed out, b) the changes in hydrogeology related to glaciation/deglaciation and land uplift, c) repeated marine/lake water regressions/transgressions, and d) organic or inorganic alteration of the groundwater caused by microbial processes or water/rock interactions. The sampled groundwaters reflect to various degrees modern or ancient water/rock interactions and mixing processes. Based on the general geochemical character and the apparent age two major water types occur in Forsmark: fresh-meteoric waters with a bicarbonate imprint and low residence times (tritium values above detection limit), and brackish-marine waters with Cl contents up to 6,000 mg/L and longer residence times (tritium

  8. Thermal modelling. Preliminary site description Laxemar subarea - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Sundberg, Jan; Wrafter, John; Back, Paer-Erik; Laendell, Maerta [Geo Innova AB, Linkoeping (Sweden)

    2006-02-15

    This report presents the thermal site descriptive model for the Laxemar subarea, version 1.2. The main objective of this report is to present the thermal modelling work where data has been identified, quality controlled, evaluated and summarised in order to make an upscaling to lithological domain level possible. The thermal conductivity at canister scale has been modelled for five different lithological domains: RSMA (Aevroe granite), RSMBA (mixture of Aevroe granite and fine-grained dioritoid), RSMD (quartz monzodiorite), RSME (diorite/gabbro) and RSMM (mix domain with high frequency of diorite to gabbro). A base modelling approach has been used to determine the mean value of the thermal conductivity. Four alternative/complementary approaches have been used to evaluate the spatial variability of the thermal conductivity at domain level. The thermal modelling approaches are based on the lithological domain model for the Laxemar subarea, version 1.2 together with rock type models based on measured and calculated (from mineral composition) thermal conductivities. For one rock type, Aevroe granite (501044), density loggings have also been used in the domain modelling in order to evaluate the spatial variability within the Aevroe granite. This has been possible due to an established relationship between density and thermal conductivity, valid for the Aevroe granite. Results indicate that the means of thermal conductivity for the various domains are expected to exhibit a variation from 2.45 W/(m.K) to 2.87 W/(m.K). The standard deviation varies according to the scale considered, and for the 0.8 m scale it is expected to range from 0.17 to 0.29 W/(m.K). Estimates of lower tail percentiles for the same scale are presented for all five domains. The temperature dependence is rather small with a decrease in thermal conductivity of 1.1-5.3% per 100 deg C increase in temperature for the dominant rock types. There are a number of important uncertainties associated with these

  9. Thermal modelling. Preliminary site description Simpevarp subarea - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Sundberg, Jan; Back, Paer-Erik; Bengtsson, Anna; Laendell, Maerta [Geo Innova AB, Linkoeping (Sweden)

    2005-08-15

    This report presents the thermal site descriptive model for the Simpevarp subarea, version 1.2. The main objective of this report is to present the thermal modelling work where data has been identified, quality controlled, evaluated and summarised in order to make an upscaling to lithological domain level possible. The thermal conductivity at possible canister scale has been modelled for four different lithological domains (RSMA01 (Aevroe granite), RSMB01 (Fine-grained dioritoid), RSMC01 (mixture of Aevroe granite and Quartz monzodiorite), and RSMD01 (Quartz monzodiorite)). A main modelling approach has been used to determine the mean value of the thermal conductivity. Three alternative/complementary approaches have been used to evaluate the spatial variability of the thermal conductivity at domain level. The thermal modelling approaches are based on the lithological model for the Simpevarp subarea, version 1.2 together with rock type models constituted from measured and calculated (from mineral composition) thermal conductivities. For one rock type, the Aevroe granite (501044), density loggings within the specific rock type has also been used in the domain modelling in order to consider the spatial variability within the Aevroe granite. This has been possible due to the presented relationship between density and thermal conductivity, valid for the Aevroe granite. Results indicate that the mean of thermal conductivity is expected to exhibit only a small variation between the different domains, from 2.62 W/(m.K) to 2.80 W/(m.K). The standard deviation varies according to the scale considered and for the canister scale it is expected to range from 0.20 to 0.28 W/(m.K). Consequently, the lower confidence limit (95% confidence) for the canister scale is within the range 2.04-2.35 W/(m.K) for the different domains. The temperature dependence is rather small with a decrease in thermal conductivity of 1.1-3.4% per 100 deg C increase in temperature for the dominating rock

  10. Smart Voyage Planning Model Sensitivity Analysis Using Ocean and Atmospheric Models Including Ensemble Methods

    Science.gov (United States)

    2012-09-01

    ATMOSPHERIC MODELS INCLUDING ENSEMBLE METHODS Scott E. Miller Lieutenant Commander, United States Navy B.S., University of South Carolina, 2000 B.S...Typical gas turbine fuel consumption curve and relationship to sea state .......51  Figure 16.  DDG 58 speed reduction curves for bow seas...Day Time Group ECDIS-N Electronic Chart Display and Information System – Navy ECMWF European Center for Medium Range Weather Forecasts EFAS

  11. The selection and use of essential medicines. Report of the WHO expert committee, 2005 (including the 14th model list of essential medicines).

    Science.gov (United States)

    2006-01-01

    This report presents the recommendations of the WHO Expert Committee responsible for updating the WHO Model List of Essential Medicines. The first part contains a summary of the Committee's considerations and justifications for additions and changes to the Model List, including its recommendations. Annexes to the main report include the revised version of the WHO Model List of Essential Medicines (the 14th) and a list of all items on the Model List sorted according to their 5-level Anatomical Therapeutic Chemical (ATC) classification codes.

  12. VALIDATION OF THE ASTER GLOBAL DIGITAL ELEVATION MODEL VERSION 2 OVER THE CONTERMINOUS UNITED STATES

    Directory of Open Access Journals (Sweden)

    D. Gesch

    2012-07-01

    Full Text Available The ASTER Global Digital Elevation Model Version 2 (GDEM v2 was evaluated over the conterminous United States in a manner similar to the validation conducted for the original GDEM Version 1 (v1 in 2009. The absolute vertical accuracy of GDEM v2 was calculated by comparison with more than 18,000 independent reference geodetic ground control points from the National Geodetic Survey. The root mean square error (RMSE measured for GDEM v2 is 8.68 meters. This compares with the RMSE of 9.34 meters for GDEM v1. Another important descriptor of vertical accuracy is the mean error, or bias, which indicates if a DEM has an overall vertical offset from true ground level. The GDEM v2 mean error of –0.20 meters is a significant improvement over the GDEM v1 mean error of –3.69 meters. The absolute vertical accuracy assessment results, both mean error and RMSE, were segmented by land cover to examine the effects of cover types on measured errors. The GDEM v2 mean errors by land cover class verify that the presence of aboveground features (tree canopies and built structures cause a positive elevation bias, as would be expected for an imaging system like ASTER. In open ground classes (little or no vegetation with significant aboveground height, GDEM v2 exhibits a negative bias on the order of 1 meter. GDEM v2 was also evaluated by differencing with the Shuttle Radar Topography Mission (SRTM dataset. In many forested areas, GDEM v2 has elevations that are higher in the canopy than SRTM.

  13. Accelerator System Model (ASM) user manual with physics and engineering model documentation. ASM version 1.0

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1993-07-01

    The Accelerator System Model (ASM) is a computer program developed to model proton radiofrequency accelerators and to carry out system level trade studies. The ASM FORTRAN subroutines are incorporated into an intuitive graphical user interface which provides for the {open_quotes}construction{close_quotes} of the accelerator in a window on the computer screen. The interface is based on the Shell for Particle Accelerator Related Codes (SPARC) software technology written for the Macintosh operating system in the C programming language. This User Manual describes the operation and use of the ASM application within the SPARC interface. The Appendix provides a detailed description of the physics and engineering models used in ASM. ASM Version 1.0 is joint project of G. H. Gillespie Associates, Inc. and the Accelerator Technology (AT) Division of the Los Alamos National Laboratory. Neither the ASM Version 1.0 software nor this ASM Documentation may be reproduced without the expressed written consent of both the Los Alamos National Laboratory and G. H. Gillespie Associates, Inc.

  14. A generic method for automatic translation between input models for different versions of simulation codes

    Energy Technology Data Exchange (ETDEWEB)

    Serfontein, Dawid E., E-mail: Dawid.Serfontein@nwu.ac.za [School of Mechanical and Nuclear Engineering, North West University (PUK-Campus), PRIVATE BAG X6001 (Internal Post Box 360), Potchefstroom 2520 (South Africa); Mulder, Eben J. [School of Mechanical and Nuclear Engineering, North West University (South Africa); Reitsma, Frederik [Calvera Consultants (South Africa)

    2014-05-01

    A computer code was developed for the semi-automatic translation of input models for the VSOP-A diffusion neutronics simulation code to the format of the newer VSOP 99/05 code. In this paper, this algorithm is presented as a generic method for producing codes for the automatic translation of input models from the format of one code version to another, or even to that of a completely different code. Normally, such translations are done manually. However, input model files, such as for the VSOP codes, often are very large and may consist of many thousands of numeric entries that make no particular sense to the human eye. Therefore the task, of for instance nuclear regulators, to verify the accuracy of such translated files can be very difficult and cumbersome. This may cause translation errors not to be picked up, which may have disastrous consequences later on when a reactor with such a faulty design is built. Therefore a generic algorithm for producing such automatic translation codes may ease the translation and verification process to a great extent. It will also remove human error from the process, which may significantly enhance the accuracy and reliability of the process. The developed algorithm also automatically creates a verification log file which permanently record the names and values of each variable used, as well as the list of meanings of all the possible values. This should greatly facilitate reactor licensing applications.

  15. Evaluating and improving cloud phase in the Community Atmosphere Model version 5 using spaceborne lidar observations

    Science.gov (United States)

    Kay, Jennifer E.; Bourdages, Line; Miller, Nathaniel B.; Morrison, Ariel; Yettella, Vineel; Chepfer, Helene; Eaton, Brian

    2016-04-01

    Spaceborne lidar observations from the Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO) satellite are used to evaluate cloud amount and cloud phase in the Community Atmosphere Model version 5 (CAM5), the atmospheric component of a widely used state-of-the-art global coupled climate model (Community Earth System Model). By embedding a lidar simulator within CAM5, the idiosyncrasies of spaceborne lidar cloud detection and phase assignment are replicated. As a result, this study makes scale-aware and definition-aware comparisons between model-simulated and observed cloud amount and cloud phase. In the global mean, CAM5 has insufficient liquid cloud and excessive ice cloud when compared to CALIPSO observations. Over the ice-covered Arctic Ocean, CAM5 has insufficient liquid cloud in all seasons. Having important implications for projections of future sea level rise, a liquid cloud deficit contributes to a cold bias of 2-3°C for summer daily maximum near-surface air temperatures at Summit, Greenland. Over the midlatitude storm tracks, CAM5 has excessive ice cloud and insufficient liquid cloud. Storm track cloud phase biases in CAM5 maximize over the Southern Ocean, which also has larger-than-observed seasonal variations in cloud phase. Physical parameter modifications reduce the Southern Ocean cloud phase and shortwave radiation biases in CAM5 and illustrate the power of the CALIPSO observations as an observational constraint. The results also highlight the importance of using a regime-based, as opposed to a geographic-based, model evaluation approach. More generally, the results demonstrate the importance and value of simulator-enabled comparisons of cloud phase in models used for future climate projection.

  16. Evaluation of the Community Multiscale Air Quality model version 5.1

    Science.gov (United States)

    The Community Multiscale Air Quality model is a state-of-the-science air quality model that simulates the emission, transport and fate of numerous air pollutants, including ozone and particulate matter. The Atmospheric Modeling and Analysis Division (AMAD) of the U.S. Environment...

  17. Improved Subseasonal Prediction with Advanced Coupled Models including the 30km FIM-HYCOM Coupled Model

    Science.gov (United States)

    Benjamin, Stan; Sun, Shan; Grell, Georg; Green, Benjamin; Bleck, Rainer; Li, Haiqin

    2017-04-01

    Extreme events for subseasonal duration have been linked to multi-week processes related to onset, duration, and cessation of blocking events or, more generally, quasi-stationary waves. Results will be shown from different sets of 32-day prediction experiments (3200 runs each) over a 16-year period for earth system processes key for subseasonal prediction for different resolution, numerics, and physics using the FIM-HYCOM coupled model. The coupled atmosphere (FIM) and ocean (HYCOM) modeling system is a relatively new coupled atmosphere-ocean model developed for subseasonal to seasonal prediction (Green et al. 2017 Mon.Wea.Rev. accepted, Bleck et al 2015 Mon. Wea. Rev.). Both component models operate on a common icosahedral horizontal grid and use an adaptive hybrid vertical coordinate (sigma-isentropic in FIM and sigma-isopycnic in HYCOM). FIM-HYCOM has been used to conduct 16 years of subseasonal retrospective forecasts following the NOAA Subseasonal (SubX) NMME protocol (32-day forward integrations), run with 4 ensemble members per week. Results from this multi-year FIM-HYCOM hindcast include successful forecasts out to 14-20 days for stratospheric warming events (from archived 10 hPa fields), improved MJO predictability (Green et al. 2017) using the Grell-Freitas (2014, ACP) scale-aware cumulus scheme instead of the Simplified Arakawa-Schubert scheme, and little sensitivity to resolution for blocking frequency. Forecast skill of metrics from FIM-HYCOM including 500 hPa heights and MJO index is at least comparable to that of the operational Climate Forecast System (CFSv2) used by the National Centers for Environmental Prediction. Subseasonal skill is improved with a limited multi-model (FIM-HYCOM and CFSv2), consistent with previous seasonal multi-model ensemble results. Ongoing work will also be reported on for adding inline aerosol/chemistry treatment to the coupled FIM-HYCOM model and for advanced approaches to subgrid-scale clouds to address regional biases

  18. Coupling of the VAMPER permafrost model within the earth system model iLOVECLIM (version 1.0: description and validation

    Directory of Open Access Journals (Sweden)

    D. Kitover

    2014-11-01

    Full Text Available The VAMPER permafrost model has been enhanced for coupling within the iLOVECLIM earth system model of intermediate complexity by including snow thickness and active layer calculations. In addition, the coupling between iLOVECLIM and the VAMPER model includes two spatially variable maps of geothermal heat flux and generalized lithology. A semi-coupled version is validated using the modern day extent of permafrost along with observed permafrost thickness and subsurface temperatures at selected borehole sites. The modeling run not including the effects of snow cover overestimate the present permafrost extent. However, when the snow component is included, the extent is overall reduced too much. It was found that most of the modeled thickness values and subsurface temperatures fall within a reasonable range of the corresponding observed values. Discrepancies are due to lack of captured effects from features such as topography and organic soil layers. In addition, some discrepancy is also due to disequilibrium with the current climate, meaning that some permafrost is a result of colder states and therefore cannot be reproduced accurately with the iLOVECLIM preindustrial forcings.

  19. A multi-sectoral version of the Post-Keynesian growth model

    Directory of Open Access Journals (Sweden)

    Ricardo Azevedo Araujo

    2015-03-01

    Full Text Available Abstract With this inquiry, we seek to develop a disaggregated version of the post-Keynesian approach to economic growth, by showing that indeed it can be treated as a particular case of the Pasinettian model of structural change and economic expansion. By relying upon vertical integration it becomes possible to carry out the analysis initiated by Kaldor (1956 and Robinson (1956, 1962, and followed by Dutt (1984, Rowthorn (1982 and later Bhaduri and Marglin (1990 in a multi-sectoral model in which demand and productivity increase at different paces in each sector. By adopting this approach it is possible to show that the structural economic dynamics is conditioned not only to patterns of evolving demand and diffusion of technological progress but also to the distributive features of the economy, which can give rise to different regimes of economic growth. Besides, we find it possible to determine the natural rate of profit that makes the mark-up rate to be constant over time.

  20. Re-evaluation of Predictive Models in Light of New Data: Sunspot Number Version 2.0

    Science.gov (United States)

    Gkana, A.; Zachilas, L.

    2016-10-01

    The original version of the Zürich sunspot number (Sunspot Number Version 1.0) has been revised by an entirely new series (Sunspot Number Version 2.0). We re-evaluate the performance of our previously proposed models for predicting solar activity in the light of the revised data. We perform new monthly and yearly predictions using the Sunspot Number Version 2.0 as input data and compare them with our original predictions (using the Sunspot Number Version 1.0 series as input data). We show that our previously proposed models are still able to produce quite accurate solar-activity predictions despite the full revision of the Zürich Sunspot Number, indicating that there is no significant degradation in their performance. Extending our new monthly predictions (July 2013 - August 2015) by 50 time-steps (months) ahead in time (from September 2015 to October 2019), we provide evidence that we are heading into a period of dramatically low solar activity. Finally, our new future long-term predictions endorse our previous claim that a prolonged solar activity minimum is expected to occur, lasting up to the year ≈ 2100.

  1. Simulating the 2012 High Plains Drought Using Three Single Column Model Versions of the Community Earth System Model (SCM-CESM)

    Science.gov (United States)

    Medina, I. D.; Denning, S.

    2014-12-01

    The impact of changes in the frequency and severity of drought on fresh water sustainability is a great concern for many regions of the world. One such location is the High Plains, where the local economy is primarily driven by fresh water withdrawals from the Ogallala Aquifer, which accounts for approximately 30% of total irrigation withdrawals from all U.S. aquifers combined. Modeling studies that focus on the feedback mechanisms that control the climate and eco-hydrology during times of drought are limited in the sense that they use conventional General Circulation Models (GCMs) with grid length scales ranging from one hundred to several hundred kilometers. Additionally, these models utilize crude statistical parameterizations of cloud processes for estimating sub-grid fluxes of heat and moisture and have a poor representation of land surface heterogeneity. For this research, we focus on the 2012 High Plains drought, and will perform numerical simulations using three single column model versions of the Community Earth System Model (SCM-CESM) at multiple sites overlying the Ogallala Aquifer for the 2010-2012 period. In the first version of SCM-CESM, CESM will be used in standard mode (Community Atmospheric Model (CAM) coupled to a single instance of the Community Land Model (CLM)), secondly, CESM will be used in Super-Parameterized mode (SP-CESM), where a cloud resolving model (CRM consists of 32 atmospheric columns) replaces the standard CAM atmospheric parameterization and is coupled to a single instance of CLM, and thirdly, CESM is used in "Multi Instance" SP-CESM mode, where an instance of CLM is coupled to each CRM column of SP-CESM (32 CRM columns coupled to 32 instances of CLM). To assess the physical realism of the land-atmosphere feedbacks simulated at each site by all versions of SCM-CESM, differences in simulated energy and moisture fluxes will be computed between years for the 2010-2012 period, and will be compared to differences calculated using

  2. Mathematical multi-scale model of the cardiovascular system including mitral valve dynamics. Application to ischemic mitral insufficiency

    Directory of Open Access Journals (Sweden)

    Moonen Marie

    2011-09-01

    Full Text Available Abstract Background Valve dysfunction is a common cardiovascular pathology. Despite significant clinical research, there is little formal study of how valve dysfunction affects overall circulatory dynamics. Validated models would offer the ability to better understand these dynamics and thus optimize diagnosis, as well as surgical and other interventions. Methods A cardiovascular and circulatory system (CVS model has already been validated in silico, and in several animal model studies. It accounts for valve dynamics using Heaviside functions to simulate a physiologically accurate "open on pressure, close on flow" law. However, it does not consider real-time valve opening dynamics and therefore does not fully capture valve dysfunction, particularly where the dysfunction involves partial closure. This research describes an updated version of this previous closed-loop CVS model that includes the progressive opening of the mitral valve, and is defined over the full cardiac cycle. Results Simulations of the cardiovascular system with healthy mitral valve are performed, and, the global hemodynamic behaviour is studied compared with previously validated results. The error between resulting pressure-volume (PV loops of already validated CVS model and the new CVS model that includes the progressive opening of the mitral valve is assessed and remains within typical measurement error and variability. Simulations of ischemic mitral insufficiency are also performed. Pressure-Volume loops, transmitral flow evolution and mitral valve aperture area evolution follow reported measurements in shape, amplitude and trends. Conclusions The resulting cardiovascular system model including mitral valve dynamics provides a foundation for clinical validation and the study of valvular dysfunction in vivo. The overall models and results could readily be generalised to other cardiac valves.

  3. PVWatts Version 5 Manual

    Energy Technology Data Exchange (ETDEWEB)

    Dobos, A. P.

    2014-09-01

    The NREL PVWatts calculator is a web application developed by the National Renewable Energy Laboratory (NREL) that estimates the electricity production of a grid-connected photovoltaic system based on a few simple inputs. PVWatts combines a number of sub-models to predict overall system performance, and makes includes several built-in parameters that are hidden from the user. This technical reference describes the sub-models, documents assumptions and hidden parameters, and explains the sequence of calculations that yield the final system performance estimate. This reference is applicable to the significantly revised version of PVWatts released by NREL in 2014.

  4. Hydrogeological DFN modelling using structural and hydraulic data from KLX04. Preliminary site description Laxemar subarea - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Follin, Sven [SF GeoLogic AB, Taeby (Sweden); Stigsson, Martin [Swedish Nuclear Fuel and Waste Management Co., Stockholm (Sweden); Svensson, Urban [Computer-aided Fluid Engineering AB, Norrkoeping (Sweden)

    2006-04-15

    SKB is conducting site investigations for a high-level nuclear waste repository in fractured crystalline rocks at two coastal areas in Sweden. The two candidate areas are named Forsmark and Simpevarp. The site characterisation work is divided into two phases, an initial site investigation phase (ISI) and a complete site investigation phase (CSI). The results of the ISI phase are used as a basis for deciding on the subsequent CSI phase. On the basis of the CSI investigations a decision is made as to whether detailed characterisation will be performed (including sinking of a shaft). An integrated component in the site characterisation work is the development of site descriptive models. These comprise basic models in three dimensions with an accompanying text description. Central in the modelling work is the geological model which provides the geometrical context in terms of a model of deformation zones and the less fractured rock mass between the zones. Using the geological and geometrical description models as a basis, descriptive models for other disciplines (surface ecosystems, hydrogeology, hydrogeochemistry, rock mechanics, thermal properties and transport properties) will be developed. Great care is taken to arrive at a general consistency in the description of the various models and assessment of uncertainty and possible needs of alternative models. The main objective of this study is to support the development of a hydrogeological DFN model (Discrete Fracture Network) for the Preliminary Site Description of the Laxemar area on a regional-scale (SDM version L1.2). A more specific objective of this study is to assess the propagation of uncertainties in the geological DFN modelling reported for L1.2 into the groundwater flow modelling. An improved understanding is necessary in order to gain credibility for the Site Description in general and the hydrogeological description in particular. The latter will serve as a basis for describing the present

  5. Development of an Information Exchange format for the Observations Data Model version 2 using OGC Observations and Measures

    Science.gov (United States)

    Valentine, D. W., Jr.; Aufdenkampe, A. K.; Horsburgh, J. S.; Hsu, L.; Lehnert, K. A.; Mayorga, E.; Song, L.; Zaslavsky, I.; Whitenack, T.

    2014-12-01

    The Observations Data Model v1 (ODMv1) schema has been utilized of the basis hydrologic cyberinfrastructures include the CUAHSI HIS. The first version of ODM focused on timeseries, and ultimately led the development of OGC "WaterML2 Part 1: Timeseries", which is being proposed to be developed into OGC TimeseriesML.Our team has developed an ODMv2 model to address ODMv1 shortcomings, and to encompass a wider community of spatially discrete, feature-based earth observations. The development process included collecting requirements from several existing Earth Observations data systems: HIS,CZOData, IEDA and EarthChem system, and IOOS. We developed ODM2 as a set of core entities with additional extensioncomponents that can be utilized. These extensions include for shared functionality (e.g. data quality, provenance), as well as specific use cases (e.g. laboratory analysis, equipment). Initially, we closely followed the Observations and Measures (ISO19156) concept model. After prototyping and reviewing the requirements, we extended the ODMv2 conceptual model to include entities to document ancillary acts that do not always produce a result. Differing from O&M where acts are expected to produce a result. ODMv2 includes the core concept of an "Action" which encapsulates activities or actions associated that are performed in the process of making an observation, but may not produce a result. Actions, such as a sample analysis, that observe a property and produce a result are equivalent to O&M observation. But in many use cases, many actions have no resulting observation. Examples of such actions are a site visit or sample preparation (splitting of a sample). These actions are part of a chain of actions, iwhich produce the final observation. Overall the ODMv2 generally follows the O&M conceptual model. The nearly final ODMv2 includes a core and extensions. The core entities include actions, feature actions (observations), datasets (groupings), methods (procedures), sampling

  6. Users` manual for LEHGC: A Lagrangian-Eulerian Finite-Element Model of Hydrogeochemical Transport Through Saturated-Unsaturated Media. Version 1.1

    Energy Technology Data Exchange (ETDEWEB)

    Yeh, Gour-Tsyh [Pennsylvania State Univ., University Park, PA (United States). Dept. of Civil and Environmental Engineering; Carpenter, S.L. [Univ. of New Mexico, Albuquerque, NM (United States). Dept. of Earth and Planetary Sciences; Hopkins, P.L.; Siegel, M.D. [Sandia National Labs., Albuquerque, NM (United States)

    1995-11-01

    The computer program LEHGC is a Hybrid Lagrangian-Eulerian Finite-Element Model of HydroGeo-Chemical (LEHGC) Transport Through Saturated-Unsaturated Media. LEHGC iteratively solves two-dimensional transport and geochemical equilibrium equations and is a descendant of HYDROGEOCHEM, a strictly Eulerian finite-element reactive transport code. The hybrid Lagrangian-Eulerian scheme improves on the Eulerian scheme by allowing larger time steps to be used in the advection-dominant transport calculations. This causes less numerical dispersion and alleviates the problem of calculated negative concentrations at sharp concentration fronts. The code also is more computationally efficient than the strictly Eulerian version. LEHGC is designed for generic application to reactive transport problems associated with contaminant transport in subsurface media. Input to the program includes the geometry of the system, the spatial distribution of finite elements and nodes, the properties of the media, the potential chemical reactions, and the initial and boundary conditions. Output includes the spatial distribution of chemical element concentrations as a function of time and space and the chemical speciation at user-specified nodes. LEHGC Version 1.1 is a modification of LEHGC Version 1.0. The modification includes: (1) devising a tracking algorithm with the computational effort proportional to N where N is the number of computational grid nodes rather than N{sup 2} as in LEHGC Version 1.0, (2) including multiple adsorbing sites and multiple ion-exchange sites, (3) using four preconditioned conjugate gradient methods for the solution of matrix equations, and (4) providing a model for some features of solute transport by colloids.

  7. ASTER Global Digital Elevation Model Version 2 - summary of validation results

    Science.gov (United States)

    Tachikawa, Tetushi; Kaku, Manabu; Iwasaki, Akira; Gesch, Dean B.; Oimoen, Michael J.; Zhang, Z.; Danielson, Jeffrey J.; Krieger, Tabatha; Curtis, Bill; Haase, Jeff; Abrams, Michael; Carabajal, C.; Meyer, Dave

    2011-01-01

    On June 29, 2009, NASA and the Ministry of Economy, Trade and Industry (METI) of Japan released a Global Digital Elevation Model (GDEM) to users worldwide at no charge as a contribution to the Global Earth Observing System of Systems (GEOSS). This “version 1” ASTER GDEM (GDEM1) was compiled from over 1.2 million scenebased DEMs covering land surfaces between 83°N and 83°S latitudes. A joint U.S.-Japan validation team assessed the accuracy of the GDEM1, augmented by a team of 20 cooperators. The GDEM1 was found to have an overall accuracy of around 20 meters at the 95% confidence level. The team also noted several artifacts associated with poor stereo coverage at high latitudes, cloud contamination, water masking issues and the stacking process used to produce the GDEM1 from individual scene-based DEMs (ASTER GDEM Validation Team, 2009). Two independent horizontal resolution studies estimated the effective spatial resolution of the GDEM1 to be on the order of 120 meters.

  8. Atmospheric radionuclide transport model with radon postprocessor and SBG module. Model description version 2.8.0; ARTM. Atmosphaerisches Radionuklid-Transport-Modell mit Radon Postprozessor und SBG-Modul. Modellbeschreibung zu Version 2.8.0

    Energy Technology Data Exchange (ETDEWEB)

    Richter, Cornelia; Sogalla, Martin; Thielen, Harald; Martens, Reinhard

    2015-04-20

    The study on the atmospheric radionuclide transport model with radon postprocessor and SBG module (model description version 2.8.0) covers the following issues: determination of emissions, radioactive decay, atmospheric dispersion calculation for radioactive gases, atmospheric dispersion calculation for radioactive dusts, determination of the gamma cloud radiation (gamma submersion), terrain roughness, effective source height, calculation area and model points, geographic reference systems and coordinate transformations, meteorological data, use of invalid meteorological data sets, consideration of statistical uncertainties, consideration of housings, consideration of bumpiness, consideration of terrain roughness, use of frequency distributions of the hourly dispersion situation, consideration of the vegetation period (summer), the radon post processor radon.exe, the SBG module, modeling of wind fields, shading settings.

  9. The Marine Virtual Laboratory (version 2.1): enabling efficient ocean model configuration

    Science.gov (United States)

    Oke, Peter R.; Proctor, Roger; Rosebrock, Uwe; Brinkman, Richard; Cahill, Madeleine L.; Coghlan, Ian; Divakaran, Prasanth; Freeman, Justin; Pattiaratchi, Charitha; Roughan, Moninya; Sandery, Paul A.; Schaeffer, Amandine; Wijeratne, Sarath

    2016-09-01

    The technical steps involved in configuring a regional ocean model are analogous for all community models. All require the generation of a model grid, preparation and interpolation of topography, initial conditions, and forcing fields. Each task in configuring a regional ocean model is straightforward - but the process of downloading and reformatting data can be time-consuming. For an experienced modeller, the configuration of a new model domain can take as little as a few hours - but for an inexperienced modeller, it can take much longer. In pursuit of technical efficiency, the Australian ocean modelling community has developed the Web-based MARine Virtual Laboratory (WebMARVL). WebMARVL allows a user to quickly and easily configure an ocean general circulation or wave model through a simple interface, reducing the time to configure a regional model to a few minutes. Through WebMARVL, a user is prompted to define the basic options needed for a model configuration, including the model, run duration, spatial extent, and input data. Once all aspects of the configuration are selected, a series of data extraction, reprocessing, and repackaging services are run, and a "take-away bundle" is prepared for download. Building on the capabilities developed under Australia's Integrated Marine Observing System, WebMARVL also extracts all of the available observations for the chosen time-space domain. The user is able to download the take-away bundle and use it to run the model of his or her choice. Models supported by WebMARVL include three community ocean general circulation models and two community wave models. The model configuration from the take-away bundle is intended to be a starting point for scientific research. The user may subsequently refine the details of the model set-up to improve the model performance for the given application. In this study, WebMARVL is described along with a series of results from test cases comparing WebMARVL-configured models to observations

  10. RAMS Model for Terrestrial Pathways Version 3. 0 (for microcomputers). Model-Simulation

    Energy Technology Data Exchange (ETDEWEB)

    Niebla, E.

    1989-01-01

    The RAMS Model for Terrestrial Pathways is a computer program for calculation of numeric criteria for land application and distribution and marketing of sludges under the sewage-sludge regulations at 40 CFR Part 503. The risk-assessment models covered assume that municipal sludge with specified characteristics is spread across a defined area of ground at a known rate once each year for a given number of years. Risks associated with direct land application of sludge applied after distribution and marketing are both calculated. The computer program calculates the maximum annual loading of contaminants that can be land applied and still meet the risk criteria specified as input. Software Description: The program is written in the Turbo/Basic programming language for implementation on IBM PC/AT or compatible machines using DOS 3.0 or higher operating system. Minimum core storage is 512K.

  11. Planar version of the CPT-even gauge sector of the standard model extension

    Energy Technology Data Exchange (ETDEWEB)

    Ferreira Junior, Manoel M.; Casana, Rodolfo; Gomes, Adalto Rodrigues; Carvalho, Eduardo S. [Universidade Federal do Maranhao (UFMA), Sao Luis, MA (Brazil). Dept. de Fisica

    2011-07-01

    The CPT-even abelian gauge sector of the Standard Model Extension is represented by the Maxwell term supplemented by (K{sub F} ){sub {mu}}{nu}{rho}{sigma} F{sup {mu}}{nu} F{sup {rho}}{sigma}, where the Lorentz-violating background tensor, (K{sub F} ){sub {mu}}{nu}{rho}{sigma}, possesses the symmetries of the Riemann tensor and a double null trace, which renders nineteen independent components. From these ones, ten components yield birefringence while nine are nonbirefringent ones. In the present work, we examine the planar version of this theory, obtained by means of a typical dimensional reduction procedure to (1 + 2) dimensions. We obtain a kind of planar scalar electrodynamics, which is composed of a gauge sector containing six Lorentz-violating coefficients, a scalar field endowed with a noncanonical kinetic term, and a coupling term that links the scalar and gauge sectors. The dispersion relation is exactly determined, revealing that the six parameters related to the pure electromagnetic sector do not yield birefringence at any order. In this model, the birefringence may appear only as a second order effect associated with the coupling tensor linking the gauge and scalar sectors.The equations of motion are written and solved in the stationary regime. The Lorentz-violating parameters do not alter the asymptotic behavior of the fields but induce an angular dependence not observed in the Maxwell planar theory. The energy-momentum tensor was evaluated as well, revealing that the theory presents energy stability. (author)

  12. A Comparison of Different Versions of the Method of Multiple Scales for an Arbitrary Model of Odd Nonlinearities

    OpenAIRE

    Pakdemirli, Mehmet; Boyacı, Hakan

    1999-01-01

    A general model of cubic and fifth order nonlinearities is considered. The linear part as well as the nonlinearities are expressed in terms of arbitrary operators. Two different versions of the method of multiple scales are used in constructing the general transient and steady-state solutions of the model: Modified Rahman-Burton method and the Reconstitution method. It is found that the usual ordering of reconstitution can be used, if at higher orders of approximation, the time scale correspo...

  13. Scaling and long-range dependence in option pricing III: A fractional version of the Merton model with transaction costs

    Science.gov (United States)

    Wang, Xiao-Tian; Yan, Hai-Gang; Tang, Ming-Ming; Zhu, En-Hui

    2010-02-01

    A model for option pricing of fractional version of the Merton model with ‘Hurst exponent’ H being in [1/2,1) is established with transaction costs. In particular, for H∈(1/2,1) the minimal price Cmin(t,St) of an option under transaction costs is obtained, which displays that the timestep δt and the ‘Hurst exponent’ H play an important role in option pricing with transaction costs.

  14. The global aerosol-climate model ECHAM-HAM, version 2: sensitivity to improvements in process representations

    Directory of Open Access Journals (Sweden)

    K. Zhang

    2012-10-01

    Full Text Available This paper introduces and evaluates the second version of the global aerosol-climate model ECHAM-HAM. Major changes have been brought into the model, including new parameterizations for aerosol nucleation and water uptake, an explicit treatment of secondary organic aerosols, modified emission calculations for sea salt and mineral dust, the coupling of aerosol microphysics to a two-moment stratiform cloud microphysics scheme, and alternative wet scavenging parameterizations. These revisions extend the model's capability to represent details of the aerosol lifecycle and its interaction with climate. Nudged simulations of the year 2000 are carried out to compare the aerosol properties and global distribution in HAM1 and HAM2, and to evaluate them against various observations. Sensitivity experiments are performed to help identify the impact of each individual update in model formulation.

    Results indicate that from HAM1 to HAM2 there is a marked weakening of aerosol water uptake in the lower troposphere, reducing the total aerosol water burden from 75 Tg to 51 Tg. The main reason is the newly introduced κ-Köhler-theory-based water uptake scheme uses a lower value for the maximum relative humidity cutoff. Particulate organic matter loading in HAM2 is considerably higher in the upper troposphere, because the explicit treatment of secondary organic aerosols allows highly volatile oxidation products of the precursors to be vertically transported to regions of very low temperature and to form aerosols there. Sulfate, black carbon, particulate organic matter and mineral dust in HAM2 have longer lifetimes than in HAM1 because of weaker in-cloud scavenging, which is in turn related to lower autoconversion efficiency in the newly introduced two-moment cloud microphysics scheme. Modification in the sea salt emission scheme causes a significant increase in the ratio (from 1.6 to 7.7 between accumulation mode and coarse mode emission fluxes of

  15. Updating sea spray aerosol emissions in the Community Multiscale Air Quality (CMAQ model version 5.0.2

    Directory of Open Access Journals (Sweden)

    B. Gantt

    2015-05-01

    Full Text Available Sea spray aerosols (SSA impact the particle mass concentration and gas-particle partitioning in coastal environments, with implications for human and ecosystem health. Despite their importance, the emission magnitude of SSA remains highly uncertain with global estimates varying by nearly two orders of magnitude. In this study, the Community Multiscale Air Quality (CMAQ model was updated to enhance fine mode SSA emissions, include sea surface temperature (SST dependency, and reduce coastally-enhanced emissions. Predictions from the updated CMAQ model and those of the previous release version, CMAQv5.0.2, were evaluated using several regional and national observational datasets in the continental US. The updated emissions generally reduced model underestimates of sodium, chloride, and nitrate surface concentrations for an inland site of the Bay Regional Atmospheric Chemistry Experiment (BRACE near Tampa, Florida. Including SST-dependency to the SSA emission parameterization led to increased sodium concentrations in the southeast US and decreased concentrations along parts of the Pacific coast and northeastern US. The influence of sodium on the gas-particle partitioning of nitrate resulted in higher nitrate particle concentrations in many coastal urban areas due to increased condensation of nitric acid in the updated simulations, potentially affecting the predicted nitrogen deposition in sensitive ecosystems. Application of the updated SSA emissions to the California Research at the Nexus of Air Quality and Climate Change (CalNex study period resulted in modest improvement in the predicted surface concentration of sodium and nitrate at several central and southern California coastal sites. This SSA emission update enabled a more realistic simulation of the atmospheric chemistry in environments where marine air mixes with urban pollution.

  16. Effects of Lower and Higher Quality Brand Versions on Brand Evaluation: an Opponent-Process Model Plus Differential Brand-Version Weighting

    National Research Council Canada - National Science Library

    Timothy Heath; Devon DelVecchio; Michael McCarthy; Subimal Chatterjee

    2009-01-01

    ...) or lower-quality versions (e.g., Ruby Tuesday's Corner Diner). A brand-quality asymmetry emerges on measures ranging from brand choice to brand attitude to perceptions of brand expertise, innovativeness, and prestige...

  17. Regional hydrogeological simulations. Numerical modelling using ConnectFlow. Preliminary site description Simpevarp sub area - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Hartley, Lee; Hoch, Andrew; Hunter, Fiona; Jackson, Peter [Serco Assurance, Risley (United Kingdom); Marsic, Niko [Kemakta Konsult, Stockholm (Sweden)

    2005-02-01

    The Swedish Nuclear Fuel and Waste Management Company (SKB) carries out site investigations in two different candidate areas in Sweden with the objective of describing the in situ conditions for a bedrock repository for spent nuclear fuel. The two candidate areas are named Forsmark and Simpevarp. The site characterisation work is divided into two phases, an initial site investigation phase (IPLU) and a complete site investigation phase (KPLU). The results of IPLU are used as a basis for deciding on a subsequent KPLU phase. On the basis of the KPLU investigations a decision is made as to whether detailed characterisation will be performed (including sinking of a shaft).An integrated component in the site characterisation work is the development of site descriptive models. These comprise basic models in three dimensions with an accompanying text description. Central in the modelling work is the geological model which provides the geometrical context in terms of a model of deformation zones and the rock mass between the zones. Using the geological and geometrical description models as a basis, descriptive models for other geo-disciplines (hydrogeology, hydro-geochemistry, rock mechanics, thermal properties and transport properties) will be developed. Great care is taken to arrive at a general consistency in the description of the various models and assessment of uncertainty and possible needs of alternative models.Here, a numerical model is developed on a regional-scale (hundreds of square kilometres) to understand the zone of influence for groundwater flow that effects the Simpevarp area. Transport calculations are then performed by particle tracking from a local-scale release area (tens of square kilometres) to identify potential discharge areas for the site. The transport from the two site-scale release areas (a few square kilometres) at the Simpevarp site and the Laxemar site are also considered more specifically and using greater grid resolution.The main

  18. ATEFlap aerodynamic model, a dynamic stall model including the effects of trailing edge flap deflection

    Energy Technology Data Exchange (ETDEWEB)

    Bergami, L.; Gaunaa, M.

    2012-02-15

    The report presents the ATEFlap aerodynamic model, which computes the unsteady lift, drag and moment on a 2D airfoil section equipped with Adaptive Trailing Edge Flap. The model captures the unsteady response related to the effects of the vorticity shed into the wake, and the dynamics of flow separation a thin-airfoil potential flow model is merged with a dynamic stall model of the Beddoes-Leishmann type. The inputs required by the model are steady data for lift, drag, and moment coefficients as function of angle of attack and flap deflection. Further steady data used by the Beddoes- Leishmann dynamic stall model are computed in an external preprocessor application, which gives the user the possibility to verify, and eventually correct, the steady data passed to the aerodynamic model. The ATEFlap aerodynamic model is integrated in the aeroelastic simulation tool HAWC2, thus al- lowing to simulate the response of a wind turbine with trailing edge flaps on the rotor. The algorithms used by the preprocessor, and by aerodynamic model are presented, and modifications to previous implementations of the aerodynamic model are briefly discussed. The performance and the validity of the model are verified by comparing the dynamic response computed by the ATEFlap with solutions from CFD simulations. (Author)

  19. An interactive code (NETPATH) for modeling NET geochemical reactions along a flow PATH, version 2.0

    Science.gov (United States)

    Plummer, L. Niel; Prestemon, Eric C.; Parkhurst, David L.

    1994-01-01

    NETPATH is an interactive Fortran 77 computer program used to interpret net geochemical mass-balance reactions between an initial and final water along a hydrologic flow path. Alternatively, NETPATH computes the mixing proportions of two to five initial waters and net geochemical reactions that can account for the observed composition of a final water. The program utilizes previously defined chemical and isotopic data for waters from a hydrochemical system. For a set of mineral and (or) gas phases hypothesized to be the reactive phases in the system, NETPATH calculates the mass transfers in every possible combination of the selected phases that accounts for the observed changes in the selected chemical and (or) isotopic compositions observed along the flow path. The calculations are of use in interpreting geochemical reactions, mixing proportions, evaporation and (or) dilution of waters, and mineral mass transfer in the chemical and isotopic evolution of natural and environmental waters. Rayleigh distillation calculations are applied to each mass-balance model that satisfies the constraints to predict carbon, sulfur, nitrogen, and strontium isotopic compositions at the end point, including radiocarbon dating. DB is an interactive Fortran 77 computer program used to enter analytical data into NETPATH, and calculate the distribution of species in aqueous solution. This report describes the types of problems that can be solved, the methods used to solve problems, and the features available in the program to facilitate these solutions. Examples are presented to demonstrate most of the applications and features of NETPATH. The codes DB and NETPATH can be executed in the UNIX or DOS1 environment. This report replaces U.S. Geological Survey Water-Resources Investigations Report 91-4078, by Plummer and others, which described the original release of NETPATH, version 1.0 (dated December, 1991), and documents revisions and enhancements that are included in version 2.0. 1 The

  20. Importance of global aerosol modeling including secondary organic aerosol formed from monoterpene

    OpenAIRE

    Goto, Daisuke; Takemura, Toshihiko; Nakajima, Teruyuki

    2008-01-01

    A global three-dimensional aerosol transport-radiation model, coupled to an atmospheric general circulation model (AGCM), has been extended to improve the model process for organic aerosols, particularly secondary organic aerosols (SOA), and to estimate SOA contributions to direct and indirect radiative effects. Because the SOA formation process is complicated and unknown, the results in different model simulations include large differences. In this work, we simulate SOA production assuming v...

  1. MODEL ANALYSIS AND PARAMETER EXTRACTION FOR MOS CAPACITOR INCLUDING QUANTUM MECHANICAL EFFECTS

    Institute of Scientific and Technical Information of China (English)

    Hai-yan Jiang; Ping-wen Zhang

    2006-01-01

    The high frequency CV curves of MOS capacitor have been studied. It is shown that semiclassical model is a good approximation to quantum model and approaches to classical model when the oxide layer is thick. This conclusion provides us an efficient (semiclassical) model including quantum mechanical effects to do parameter extraction for ultrathi noxide device. Here the effective extracting strategy is designed and numerical experiments demonstrate the validity of the strategy.

  2. Parameterization Improvements and Functional and Structural Advances in Version 4 of the Community Land Model

    Directory of Open Access Journals (Sweden)

    Andrew G. Slater

    2011-05-01

    Full Text Available The Community Land Model is the land component of the Community Climate System Model. Here, we describe a broad set of model improvements and additions that have been provided through the CLM development community to create CLM4. The model is extended with a carbon-nitrogen (CN biogeochemical model that is prognostic with respect to vegetation, litter, and soil carbon and nitrogen states and vegetation phenology. An urban canyon model is added and a transient land cover and land use change (LCLUC capability, including wood harvest, is introduced, enabling study of historic and future LCLUC on energy, water, momentum, carbon, and nitrogen fluxes. The hydrology scheme is modified with a revised numerical solution of the Richards equation and a revised ground evaporation parameterization that accounts for litter and within-canopy stability. The new snow model incorporates the SNow and Ice Aerosol Radiation model (SNICAR - which includes aerosol deposition, grain-size dependent snow aging, and vertically-resolved snowpack heating –– as well as new snow cover and snow burial fraction parameterizations. The thermal and hydrologic properties of organic soil are accounted for and the ground column is extended to ~50-m depth. Several other minor modifications to the land surface types dataset, grass and crop optical properties, atmospheric forcing height, roughness length and displacement height, and the disposition of snow-capped runoff are also incorporated.Taken together, these augmentations to CLM result in improved soil moisture dynamics, drier soils, and stronger soil moisture variability. The new model also exhibits higher snow cover, cooler soil temperatures in organic-rich soils, greater global river discharge, and lower albedos over forests and grasslands, all of which are improvements compared to CLM3.5. When CLM4 is run with CN, the mean biogeophysical simulation is slightly degraded because the vegetation structure is prognostic rather

  3. A Scalable Version of the Navy Operational Global Atmospheric Prediction System Spectral Forecast Model

    Directory of Open Access Journals (Sweden)

    Thomas E. Rosmond

    2000-01-01

    Full Text Available The Navy Operational Global Atmospheric Prediction System (NOGAPS includes a state-of-the-art spectral forecast model similar to models run at several major operational numerical weather prediction (NWP centers around the world. The model, developed by the Naval Research Laboratory (NRL in Monterey, California, has run operational at the Fleet Numerical Meteorological and Oceanographic Center (FNMOC since 1982, and most recently is being run on a Cray C90 in a multi-tasked configuration. Typically the multi-tasked code runs on 10 to 15 processors with overall parallel efficiency of about 90%. resolution is T159L30, but other operational and research applications run at significantly lower resolutions. A scalable NOGAPS forecast model has been developed by NRL in anticipation of a FNMOC C90 replacement in about 2001, as well as for current NOGAPS research requirements to run on DOD High-Performance Computing (HPC scalable systems. The model is designed to run with message passing (MPI. Model design criteria include bit reproducibility for different processor numbers and reasonably efficient performance on fully shared memory, distributed memory, and distributed shared memory systems for a wide range of model resolutions. Results for a wide range of processor numbers, model resolutions, and different vendor architectures are presented. Single node performance has been disappointing on RISC based systems, at least compared to vector processor performance. This is a common complaint, and will require careful re-examination of traditional numerical weather prediction (NWP model software design and data organization to fully exploit future scalable architectures.

  4. A finite element model of the face including an orthotropic skin model under in vivo tension.

    Science.gov (United States)

    Flynn, Cormac; Stavness, Ian; Lloyd, John; Fels, Sidney

    2015-01-01

    Computer models of the human face have the potential to be used as powerful tools in surgery simulation and animation development applications. While existing models accurately represent various anatomical features of the face, the representation of the skin and soft tissues is very simplified. A computer model of the face is proposed in which the skin is represented by an orthotropic hyperelastic constitutive model. The in vivo tension inherent in skin is also represented in the model. The model was tested by simulating several facial expressions by activating appropriate orofacial and jaw muscles. Previous experiments calculated the change in orientation of the long axis of elliptical wounds on patients' faces for wide opening of the mouth and an open-mouth smile (both 30(o)). These results were compared with the average change of maximum principal stress direction in the skin calculated in the face model for wide opening of the mouth (18(o)) and an open-mouth smile (25(o)). The displacements of landmarks on the face for four facial expressions were compared with experimental measurements in the literature. The corner of the mouth in the model experienced the largest displacement for each facial expression (∼11-14 mm). The simulated landmark displacements were within a standard deviation of the measured displacements. Increasing the skin stiffness and skin tension generally resulted in a reduction in landmark displacements upon facial expression.

  5. Software Design Description for the Navy Coastal Ocean Model (NCOM) Version 4.0

    Science.gov (United States)

    2008-12-31

    cstr ,lenc) Data Declaration: Integer lenc Character cstr Coamps_uvg2uv Subroutine COAMPS_UVG2UV...are removed from the substrings. Calling Sequence: strpars(cline, cdelim, nstr, cstr , nsto, ierr) NRL/MR/7320--08-9149...NCOM Version 4.0 SDD 92 Subroutine Description Data Declaration: Character cline, cstr ,cdelim

  6. Hot DA white dwarf model atmosphere calculations: Including improved Ni PI cross sections

    CERN Document Server

    Preval, S P; Badnell, N R; Hubeny, I; Holberg, J B

    2016-01-01

    To calculate realistic models of objects with Ni in their atmospheres, accurate atomic data for the relevant ionization stages needs to be included in model atmosphere calculations. In the context of white dwarf stars, we investigate the effect of changing the Ni {\\sc iv}-{\\sc vi} bound-bound and bound-free atomic data has on model atmosphere calculations. Models including PICS calculated with {\\sc autostructure} show significant flux attenuation of up to $\\sim 80$\\% shortward of 180\\AA\\, in the EUV region compared to a model using hydrogenic PICS. Comparatively, models including a larger set of Ni transitions left the EUV, UV, and optical continua unaffected. We use models calculated with permutations of this atomic data to test for potential changes to measured metal abundances of the hot DA white dwarf G191-B2B. Models including {\\sc autostructure} PICS were found to change the abundances of N and O by as much as $\\sim 22$\\% compared to models using hydrogenic PICS, but heavier species were relatively unaf...

  7. Mathematical Model of Thyristor Inverter Including a Series-parallel Resonant Circuit

    Directory of Open Access Journals (Sweden)

    Miroslaw Luft

    2008-01-01

    Full Text Available The article presents a mathematical model of thyristor inverter including a series-parallel resonant circuit with theaid of state variable method. Maple procedures are used to compute current and voltage waveforms in the inverter.

  8. MATILDA Version 2: Rough Earth TIALD Model for Laser Probabilistic Risk Assessment in Hilly Terrain - Part I

    Science.gov (United States)

    2017-03-13

    AFRL-RH-FS-TR-2017-0009 MATILDA Version-2: Rough Earth TIALD Model for Laser Probabilistic Risk Assessment in Hilly Terrain – Part I Paul K...Probabilistic Risk Assessment in Hilly Terrain – Part I ii Distribution A: Approved for public release; distribution unlimited. PA Case No: TSRL-PA-2017-0169...any penalty for failing to comply with a collection of information if it does not display a currently valid OMB control number. PLEASE DO NOT RETURN

  9. A Verilog-A large signal model for InP DHBT including thermal effects

    Science.gov (United States)

    Yuxia, Shi; Zhi, Jin; Zhijian, Pan; Yongbo, Su; Yuxiong, Cao; Yan, Wang

    2013-06-01

    A large signal model for InP/InGaAs double heterojunction bipolar transistors including thermal effects has been reported, which demonstrated good agreements of simulations with measurements. On the basis of the previous model in which the double heterojunction effect, current blocking effect and high current effect in current expression are considered, the effect of bandgap narrowing with temperature has been considered in transport current while a formula for model parameters as a function of temperature has been developed. This model is implemented by Verilog-A and embedded in ADS. The proposed model is verified with DC and large signal measurements.

  10. Programs OPTMAN and SHEMMAN Version 6 (1999) - Coupled-Channels optical model and collective nuclear structure calculation -

    Energy Technology Data Exchange (ETDEWEB)

    Chang, Jong Hwa; Lee, Jeong Yeon; Lee, Young Ouk; Sukhovitski, Efrem Sh. [Korea Atomic Energy Research Institute, Taejeon (Korea)

    2000-01-01

    Programs SHEMMAN and OPTMAN (Version 6) have been developed for determinations of nuclear Hamiltonian parameters and for optical model calculations, respectively. The optical model calculations by OPTMAN with coupling schemes built on wave functions functions of non-axial soft-rotator are self-consistent, since the parameters of the nuclear Hamiltonian are determined by adjusting the energies of collective levels to experimental values with SHEMMAN prior to the optical model calculation. The programs have been installed at Nuclear Data Evaluation Laboratory of KAERI. This report is intended as a brief manual of these codes. 43 refs., 9 figs., 1 tabs. (Author)

  11. Modelling Mediterranean agro-ecosystems by including agricultural trees in the LPJmL model

    Science.gov (United States)

    Fader, M.; von Bloh, W.; Shi, S.; Bondeau, A.; Cramer, W.

    2015-11-01

    In the Mediterranean region, climate and land use change are expected to impact on natural and agricultural ecosystems by warming, reduced rainfall, direct degradation of ecosystems and biodiversity loss. Human population growth and socioeconomic changes, notably on the eastern and southern shores, will require increases in food production and put additional pressure on agro-ecosystems and water resources. Coping with these challenges requires informed decisions that, in turn, require assessments by means of a comprehensive agro-ecosystem and hydrological model. This study presents the inclusion of 10 Mediterranean agricultural plants, mainly perennial crops, in an agro-ecosystem model (Lund-Potsdam-Jena managed Land - LPJmL): nut trees, date palms, citrus trees, orchards, olive trees, grapes, cotton, potatoes, vegetables and fodder grasses. The model was successfully tested in three model outputs: agricultural yields, irrigation requirements and soil carbon density. With the development presented in this study, LPJmL is now able to simulate in good detail and mechanistically the functioning of Mediterranean agriculture with a comprehensive representation of ecophysiological processes for all vegetation types (natural and agricultural) and in a consistent framework that produces estimates of carbon, agricultural and hydrological variables for the entire Mediterranean basin. This development paves the way for further model extensions aiming at the representation of alternative agro-ecosystems (e.g. agroforestry), and opens the door for a large number of applications in the Mediterranean region, for example assessments of the consequences of land use transitions, the influence of management practices and climate change impacts.

  12. Modelling Mediterranean agro-ecosystems by including agricultural trees in the LPJmL model

    Directory of Open Access Journals (Sweden)

    M. Fader

    2015-06-01

    Full Text Available Climate and land use change in the Mediterranean region is expected to affect natural and agricultural ecosystems by decreases in precipitation, increases in temperature as well as biodiversity loss and anthropogenic degradation of natural resources. Demographic growth in the Eastern and Southern shores will require increases in food production and put additional pressure on agro-ecosystems and water resources. Coping with these challenges requires informed decisions that, in turn, require assessments by means of a comprehensive agro-ecosystem and hydrological model. This study presents the inclusion of 10 Mediterranean agricultural plants, mainly perennial crops, in an agro-ecosystem model (LPJmL: nut trees, date palms, citrus trees, orchards, olive trees, grapes, cotton, potatoes, vegetables and fodder grasses. The model was successfully tested in three model outputs: agricultural yields, irrigation requirements and soil carbon density. With the development presented in this study, LPJmL is now able to simulate in good detail and mechanistically the functioning of Mediterranean agriculture with a comprehensive representation of ecophysiological processes for all vegetation types (natural and agricultural and in a consistent framework that produces estimates of carbon, agricultural and hydrological variables for the entire Mediterranean basin. This development pave the way for further model extensions aiming at the representation of alternative agro-ecosystems (e.g. agroforestry, and opens the door for a large number of applications in the Mediterranean region, for example assessments on the consequences of land use transitions, the influence of management practices and climate change impacts.

  13. Numerical Acoustic Models Including Viscous and Thermal losses: Review of Existing and New Methods

    DEFF Research Database (Denmark)

    Andersen, Peter Risby; Cutanda Henriquez, Vicente; Aage, Niels

    2017-01-01

    This work presents an updated overview of numerical methods including acoustic viscous and thermal losses. Numerical modelling of viscothermal losses has gradually become more important due to the general trend of making acoustic devices smaller. Not including viscothermal acoustic losses in such...

  14. Statistical analysis of fracture data, adapted for modelling Discrete Fracture Networks-Version 2

    Energy Technology Data Exchange (ETDEWEB)

    Munier, Raymond

    2004-04-01

    The report describes the parameters which are necessary for DFN modelling, the way in which they can be extracted from the data base acquired during site investigations, and their assignment to geometrical objects in the geological model. The purpose here is to present a methodology for use in SKB modelling projects. Though the methodology is deliberately tuned to facilitate subsequent DFN modelling with other tools, some of the recommendations presented here are applicable to other aspects of geo-modelling as well. For instance, we here recommend a nomenclature to be used within SKB modelling projects, which are truly multidisciplinary, to ease communications between scientific disciplines and avoid misunderstanding of common concepts. This report originally occurred as an appendix to a strategy report for geological modelling (SKB-R--03-07). Strategy reports were intended to be successively updated to include experience gained during site investigations and site modelling. Rather than updating the entire strategy report, we choose to present the update of the appendix as a stand-alone document. This document thus replaces Appendix A2 in SKB-R--03-07. In short, the update consists of the following: The target audience has been broadened and as a consequence thereof, the purpose of the document. Correction of errors found in various formulae. All expressions have been rewritten. Inclusion of more worked examples in each section. A new section describing area normalisation. A new section on spatial correlation. A new section describing anisotropy. A new chapter describing the expected output from DFN modelling, within SKB projects.

  15. The selection and use of essential medicines. Report of the WHO Expert Committee, 2002 (including the 12th Model list of essential medicines).

    Science.gov (United States)

    2003-01-01

    This report presents the recommendations of the WHO Expert Committee responsible for updating the WHO Model List of Essential Medicines. The first part contains a progress report on the new procedures for updating the Model List and the development of the WHO Essential Medicines Library. It continues to present a summary of the Committee's considerations and justifications for additions and changes to the Model List, including its recommendation to add 12 antiretroviral medicines. Annexes to the main report include the revised version of the WHO Model List of Essential Medicines (the 12th) and, for the first time, a list of all items on the Model List sorted according to their 5-level Anatomical Therapeutic Chemical (ATC) classification codes.

  16. ORNL ALICE: a statistical model computer code including fission competition. [In FORTRAN

    Energy Technology Data Exchange (ETDEWEB)

    Plasil, F.

    1977-11-01

    A listing of the computer code ORNL ALICE is given. This code is a modified version of computer codes ALICE and OVERLAID ALICE. It allows for higher excitation energies and for a greater number of evaporated particles than the earlier versions. The angular momentum removal option was made more general and more internally consistent. Certain roundoff errors are avoided by keeping a strict accounting of partial probabilities. Several output options were added.

  17. Can we model observed soil carbon changes from a dense inventory? A case study over england and wales using three version of orchidee ecosystem model (AR5, AR5-PRIM and O-CN

    Directory of Open Access Journals (Sweden)

    B. Guenet

    2013-07-01

    Full Text Available A widespread decrease of the top soil carbon content was observed over England and Wales during the period 1978–2003 in the National Soil Inventory (NSI, amounting to a carbon loss of 4.44 Tg yr-1 over 141 550 km2. Subsequent modelling studies have shown that changes in temperature and precipitation could only account for a small part of the observed decrease, and therefore that changes in land use and management and resulting changes in soil respiration or primary production were the main causes. So far, all the models used to reproduce the NSI data did not account for plant-soil interactions and were only soil carbon models with carbon inputs forced by data. Here, we use three different versions of a process-based coupled soil-vegetation model called ORCHIDEE, in order to separate the effect of trends in soil carbon input, and soil carbon mineralisation induced by climate trends over 1978–2003. The first version of the model (ORCHIDEE-AR5 used for IPCC-AR5 CMIP5 Earth System simulations, is based on three soil carbon pools defined with first order decomposition kinetics, as in the CENTURY model. The second version (ORCHIDEE-AR5-PRIM built for this study includes a relationship between litter carbon and decomposition rates, to reproduce a priming effect on decomposition. The last version (O-CN takes into account N-related processes. Soil carbon decomposition in O-CN is based on CENTURY, but adds N limitations on litter decomposition. We performed regional gridded simulations with these three versions of the ORCHIDEE model over England and Wales. None of the three model versions was able to reproduce the observed NSI soil carbon trend. This suggests that either climate change is not the main driver for observed soil carbon losses, or that the ORCHIDEE model even with priming or N-effects on decomposition lacks the basic mechanisms to explain soil carbon change in response to climate, which would raise a caution flag about the ability of this

  18. Water, Energy, and Biogeochemical Model (WEBMOD), user’s manual, version 1

    Science.gov (United States)

    Webb, Richard M.T.; Parkhurst, David L.

    2017-02-08

    The Water, Energy, and Biogeochemical Model (WEBMOD) uses the framework of the U.S. Geological Survey (USGS) Modular Modeling System to simulate fluxes of water and solutes through watersheds. WEBMOD divides watersheds into model response units (MRU) where fluxes and reactions are simulated for the following eight hillslope reservoir types: canopy; snowpack; ponding on impervious surfaces; O-horizon; two reservoirs in the unsaturated zone, which represent preferential flow and matrix flow; and two reservoirs in the saturated zone, which also represent preferential flow and matrix flow. The reservoir representing ponding on impervious surfaces, currently not functional (2016), will be implemented once the model is applied to urban areas. MRUs discharge to one or more stream reservoirs that flow to the outlet of the watershed. Hydrologic fluxes in the watershed are simulated by modules derived from the USGS Precipitation Runoff Modeling System; the National Weather Service Hydro-17 snow model; and a topography-driven hydrologic model (TOPMODEL). Modifications to the standard TOPMODEL include the addition of heterogeneous vertical infiltration rates; irrigation; lateral and vertical preferential flows through the unsaturated zone; pipe flow draining the saturated zone; gains and losses to regional aquifer systems; and the option to simulate baseflow discharge by using an exponential, parabolic, or linear decrease in transmissivity. PHREEQC, an aqueous geochemical model, is incorporated to simulate chemical reactions as waters evaporate, mix, and react within the various reservoirs of the model. The reactions that can be specified for a reservoir include equilibrium reactions among water; minerals; surfaces; exchangers; and kinetic reactions such as kinetic mineral dissolution or precipitation, biologically mediated reactions, and radioactive decay. WEBMOD also simulates variations in the concentrations of the stable isotopes deuterium and oxygen-18 as a result of

  19. OBLIMAP 2.0: a fast climate model-ice sheet model coupler including online embeddable mapping routines

    Science.gov (United States)

    Reerink, Thomas J.; van de Berg, Willem Jan; van de Wal, Roderik S. W.

    2016-11-01

    This paper accompanies the second OBLIMAP open-source release. The package is developed to map climate fields between a general circulation model (GCM) and an ice sheet model (ISM) in both directions by using optimal aligned oblique projections, which minimize distortions. The curvature of the surfaces of the GCM and ISM grid differ, both grids may be irregularly spaced and the ratio of the grids is allowed to differ largely. OBLIMAP's stand-alone version is able to map data sets that differ in various aspects on the same ISM grid. Each grid may either coincide with the surface of a sphere, an ellipsoid or a flat plane, while the grid types might differ. Re-projection of, for example, ISM data sets is also facilitated. This is demonstrated by relevant applications concerning the major ice caps. As the stand-alone version also applies to the reverse mapping direction, it can be used as an offline coupler. Furthermore, OBLIMAP 2.0 is an embeddable GCM-ISM coupler, suited for high-frequency online coupled experiments. A new fast scan method is presented for structured grids as an alternative for the former time-consuming grid search strategy, realising a performance gain of several orders of magnitude and enabling the mapping of high-resolution data sets with a much larger number of grid nodes. Further, a highly flexible masked mapping option is added. The limitation of the fast scan method with respect to unstructured and adaptive grids is discussed together with a possible future parallel Message Passing Interface (MPI) implementation.

  20. Catalytic conversion of lignin pyrolysis model compound- guaiacol and its kinetic model including coke formation

    Science.gov (United States)

    Zhang, Huiyan; Wang, Yun; Shao, Shanshan; Xiao, Rui

    2016-11-01

    Lignin is the most difficult to be converted and most easy coking component in biomass catalytic pyrolysis to high-value liquid fuels and chemicals. Catalytic conversion of guaiacol as a lignin model compound was conducted in a fixed-bed reactor over ZSM-5 to investigate its conversion and coking behaviors. The effects of temperature, weight hourly space velocity (WHSV) and partial pressure on product distribution were studied. The results show the maximum aromatic carbon yield of 28.55% was obtained at temperature of 650 °C, WHSV of 8 h‑1 and partial pressure of 2.38 kPa, while the coke carbon yield was 19.55%. The reaction pathway was speculated to be removing methoxy group to form phenols with further aromatization to form aromatics. The amount of coke increased with increasing reaction time. The surface area and acidity of catalysts declined as coke formed on the acid sites and blocked the pore channels, which led to the decrease of aromatic yields. Finally, a kinetic model of guaiacol catalytic conversion considering coke deposition was built based on the above reaction pathway to properly predict product distribution. The experimental and model predicting data agreed well. The correlation coefficient of all equations were all higher than 0.90.

  1. Including operational data in QMRA model: development and impact of model inputs.

    Science.gov (United States)

    Jaidi, Kenza; Barbeau, Benoit; Carrière, Annie; Desjardins, Raymond; Prévost, Michèle

    2009-03-01

    A Monte Carlo model, based on the Quantitative Microbial Risk Analysis approach (QMRA), has been developed to assess the relative risks of infection associated with the presence of Cryptosporidium and Giardia in drinking water. The impact of various approaches for modelling the initial parameters of the model on the final risk assessments is evaluated. The Monte Carlo simulations that we performed showed that the occurrence of parasites in raw water was best described by a mixed distribution: log-Normal for concentrations > detection limit (DL), and a uniform distribution for concentrations risks significantly. The mean annual risks for conventional treatment are: 1.97E-03 (removal credit adjusted by log parasite = log spores), 1.58E-05 (log parasite = 1.7 x log spores) or 9.33E-03 (regulatory credits based on the turbidity measurement in filtered water). Using full scale validated SCADA data, the simplified calculation of CT performed at the plant was shown to largely underestimate the risk relative to a more detailed CT calculation, which takes into consideration the downtime and system failure events identified at the plant (1.46E-03 vs. 3.93E-02 for the mean risk).

  2. MIG version 0.0 model interface guidelines: Rules to accelerate installation of numerical models into any compliant parent code

    Energy Technology Data Exchange (ETDEWEB)

    Brannon, R.M.; Wong, M.K.

    1996-08-01

    A set of model interface guidelines, called MIG, is presented as a means by which any compliant numerical material model can be rapidly installed into any parent code without having to modify the model subroutines. Here, {open_quotes}model{close_quotes} usually means a material model such as one that computes stress as a function of strain, though the term may be extended to any numerical operation. {open_quotes}Parent code{close_quotes} means a hydrocode, finite element code, etc. which uses the model and enforces, say, the fundamental laws of motion and thermodynamics. MIG requires the model developer (who creates the model package) to specify model needs in a standardized but flexible way. MIG includes a dictionary of technical terms that allows developers and parent code architects to share a common vocabulary when specifying field variables. For portability, database management is the responsibility of the parent code. Input/output occurs via structured calling arguments. As much model information as possible (such as the lists of required inputs, as well as lists of precharacterized material data and special needs) is supplied by the model developer in an ASCII text file. Every MIG-compliant model also has three required subroutines to check data, to request extra field variables, and to perform model physics. To date, the MIG scheme has proven flexible in beta installations of a simple yield model, plus a more complicated viscodamage yield model, three electromechanical models, and a complicated anisotropic microcrack constitutive model. The MIG yield model has been successfully installed using identical subroutines in three vectorized parent codes and one parallel C++ code, all predicting comparable results. By maintaining one model for many codes, MIG facilitates code-to-code comparisons and reduces duplication of effort, thereby reducing the cost of installing and sharing models in diverse new codes.

  3. Representing winter wheat in the Community Land Model (version 4.5)

    Science.gov (United States)

    Lu, Yaqiong; Williams, Ian N.; Bagley, Justin E.; Torn, Margaret S.; Kueppers, Lara M.

    2017-05-01

    Winter wheat is a staple crop for global food security, and is the dominant vegetation cover for a significant fraction of Earth's croplands. As such, it plays an important role in carbon cycling and land-atmosphere interactions in these key regions. Accurate simulation of winter wheat growth is not only crucial for future yield prediction under a changing climate, but also for accurately predicting the energy and water cycles for winter wheat dominated regions. We modified the winter wheat model in the Community Land Model (CLM) to better simulate winter wheat leaf area index, latent heat flux, net ecosystem exchange of CO2, and grain yield. These included schemes to represent vernalization as well as frost tolerance and damage. We calibrated three key parameters (minimum planting temperature, maximum crop growth days, and initial value of leaf carbon allocation coefficient) and modified the grain carbon allocation algorithm for simulations at the US Southern Great Plains ARM site (US-ARM), and validated the model performance at eight additional sites across North America. We found that the new winter wheat model improved the prediction of monthly variation in leaf area index, reduced latent heat flux, and net ecosystem exchange root mean square error (RMSE) by 41 and 35 % during the spring growing season. The model accurately simulated the interannual variation in yield at the US-ARM site, but underestimated yield at sites and in regions (northwestern and southeastern US) with historically greater yields by 35 %.

  4. Nonlinear Modeling of a High Precision Servo Injection Molding Machine Including Novel Molding Approach

    Institute of Scientific and Technical Information of China (English)

    何雪松; 王旭永; 冯正进; 章志新; 杨钦廉

    2003-01-01

    A nonlinear mathematical model of the injection molding process for electrohydraulic servo injection molding machine (IMM) is developed.It was found necessary to consider the characteristics of asymmetric cylinder for electrohydraulic servo IMM.The model is based on the dynamics of the machine including servo valve,asymmetric cylinder and screw,and the non-Newtonian flow behavior of polymer melt in injection molding is also considered.The performance of the model was evaluated based on novel approach of molding - injection and compress molding,and the results of simulation and experimental data demonstrate the effectiveness of the model.

  5. a Better Description of Liquid Jet Breakup Using a Spatial Model Including Viscous Effects.

    Science.gov (United States)

    Hammerschlag, William Brian

    Theoretical models describing the operation and disintegration of a liquid jet are often based on an approximate solution of an inviscid jet in the temporal frame of reference. These models provide only a fair first order prediction of growth rate and breakoff length, and are based solely on a surface tension induced instability. A spatial model yielding jet growth rate and including both jet and surrounding atmosphere viscosity and density is now developed. This model is seen to reproduce all the features and limitations of the Weber viscous jet theory. When tested against experiments of water, water and glycerol mixes and binary eutectic tin/lead solder, only fair agreement is observed.

  6. Validation Evidence for the Elementary School Version of the MUSIC® Model of Academic Motivation Inventory (Pruebas de validación para el Modelo MUSIC® de Inventario de Motivación Educativa para Escuela Primaria)

    Science.gov (United States)

    Jones, Brett D.; Sigmon, Miranda L.

    2016-01-01

    Introduction: The purpose of our study was to assess whether the Elementary School version of the MUSIC® Model of Academic Motivation Inventory was valid for use with elementary students in classrooms with regular classroom teachers and student teachers enrolled in a university teacher preparation program. Method: The participants included 535…

  7. Validation Evidence for the Elementary School Version of the MUSIC® Model of Academic Motivation Inventory (Pruebas de validación para el Modelo MUSIC® de Inventario de Motivación Educativa para Escuela Primaria)

    Science.gov (United States)

    Jones, Brett D.; Sigmon, Miranda L.

    2016-01-01

    Introduction: The purpose of our study was to assess whether the Elementary School version of the MUSIC® Model of Academic Motivation Inventory was valid for use with elementary students in classrooms with regular classroom teachers and student teachers enrolled in a university teacher preparation program. Method: The participants included 535…

  8. Business models for renewable energy in the built environment. Updated version

    Energy Technology Data Exchange (ETDEWEB)

    Wuertenberger, L.; Menkveld, M.; Vethman, P.; Van Tilburg, X. [ECN Policy Studies, Amsterdam (Netherlands); Bleyl, J.W. [Energetic Solutions, Graz (Austria)

    2012-04-15

    The project RE-BIZZ aims to provide insight to policy makers and market actors in the way new and innovative business models (and/or policy measures) can stimulate the deployment of renewable energy technologies (RET) and energy efficiency (EE) measures in the built environment. The project is initiated and funded by the IEA Implementing Agreement for Renewable Energy Technology Deployment (IEA-RETD). It analysed ten business models in three categories (amongst others different types of Energy Service Companies (ESCOs), Developing properties certified with a 'green' building label, Building owners profiting from rent increases after EE measures, Property Assessed Clean Energy (PACE) financing, On-bill financing, and Leasing of RET equipment) including their organisational and financial structure, the existing market and policy context, and an analysis of Strengths, Weaknesses, Opportunities and Threats (SWOT). The study concludes with recommendations for policy makers and other market actors.

  9. Solid Modeling Aerospace Research Tool (SMART) user's guide, version 2.0

    Science.gov (United States)

    Mcmillin, Mark L.; Spangler, Jan L.; Dahmen, Stephen M.; Rehder, John J.

    1993-01-01

    The Solid Modeling Aerospace Research Tool (SMART) software package is used in the conceptual design of aerospace vehicles. It provides a highly interactive and dynamic capability for generating geometries with Bezier cubic patches. Features include automatic generation of commonly used aerospace constructs (e.g., wings and multilobed tanks); cross-section skinning; wireframe and shaded presentation; area, volume, inertia, and center-of-gravity calculations; and interfaces to various aerodynamic and structural analysis programs. A comprehensive description of SMART and how to use it is provided.

  10. User`s guide to the META-Net economic modeling system. Version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Lamont, A.

    1994-11-24

    In a market economy demands for commodities are met through various technologies and resources. Markets select the technologies and resources to meet these demands based on their costs. Over time, the competitiveness of different technologies can change due to the exhaustion of resources they depend on, the introduction of newer, more efficient technologies, or even shifts in user demands. As this happens, the structure of the economy changes. The Market Equilibrium and Technology Assessment Network Modelling System, META{center_dot}Net, has been developed for building and solving multi-period equilibrium models to analyze the shifts in the energy system that may occur as new technologies are introduced and resources are exhausted. META{center_dot}Net allows a user to build and solve complex economic models. It models` a market economy as a network of nodes representing resources, conversion processes, markets, and end-use demands. Commodities flow through this network from resources, through conversion processes and market, to the end-users. META{center_dot}Net then finds the multiperiod equilibrium prices and quantities. The solution includes the prices and quantities demanded for each commodity along with the capacity additions (and retirements) for each conversion process, and the trajectories of resource extraction. Although the changes in the economy are largely driven by consumers` behavior and the costs of technologies and resources, they are also affected by various government policies. These can include constraints on prices and quantities, and various taxes and constraints on environmental emissions. META{center_dot}Net can incorporate many of these mechanisms and evaluate their potential impact on the development of the economic system.

  11. Including hydrological self-regulating processes in peatland models: Effects on peatmoss drought projections.

    Science.gov (United States)

    Nijp, Jelmer J; Metselaar, Klaas; Limpens, Juul; Teutschbein, Claudia; Peichl, Matthias; Nilsson, Mats B; Berendse, Frank; van der Zee, Sjoerd E A T M

    2017-02-15

    The water content of the topsoil is one of the key factors controlling biogeochemical processes, greenhouse gas emissions and biosphere - atmosphere interactions in many ecosystems, particularly in northern peatlands. In these wetland ecosystems, the water content of the photosynthetic active peatmoss layer is crucial for ecosystem functioning and carbon sequestration, and is sensitive to future shifts in rainfall and drought characteristics. Current peatland models differ in the degree in which hydrological feedbacks are included, but how this affects peatmoss drought projections is unknown. The aim of this paper was to systematically test whether the level of hydrological detail in models could bias projections of water content and drought stress for peatmoss in northern peatlands using downscaled projections for rainfall and potential evapotranspiration in the current (1991-2020) and future climate (2061-2090). We considered four model variants that either include or exclude moss (rain)water storage and peat volume change, as these are two central processes in the hydrological self-regulation of peatmoss carpets. Model performance was validated using field data of a peatland in northern Sweden. Including moss water storage as well as peat volume change resulted in a significant improvement of model performance, despite the extra parameters added. The best performance was achieved if both processes were included. Including moss water storage and peat volume change consistently reduced projected peatmoss drought frequency with >50%, relative to the model excluding both processes. Projected peatmoss drought frequency in the growing season was 17% smaller under future climate than current climate, but was unaffected by including the hydrological self-regulating processes. Our results suggest that ignoring these two fine-scale processes important in hydrological self-regulation of northern peatlands will have large consequences for projected climate change impact on

  12. Modeling an elastic beam with piezoelectric patches by including magnetic effects

    CERN Document Server

    Ozer, A O

    2014-01-01

    Models for piezoelectric beams using Euler-Bernoulli small displacement theory predict the dynamics of slender beams at the low frequency accurately but are insufficient for beams vibrating at high frequencies or beams with low length-to-width aspect ratios. A more thorough model that includes the effects of rotational inertia and shear strain, Mindlin-Timoshenko small displacement theory, is needed to predict the dynamics more accurately for these cases. Moreover, existing models ignore the magnetic effects since the magnetic effects are relatively small. However, it was shown recently \\cite{O-M1} that these effects can substantially change the controllability and stabilizability properties of even a single piezoelectric beam. In this paper, we use a variational approach to derive models that include magnetic effects for an elastic beam with two piezoelectric patches actuated by different voltage sources. Both Euler-Bernoulli and Mindlin-Timoshenko small displacement theories are considered. Due to the magne...

  13. Stability analysis of the extended ADI-FDTD technique including lumped models

    Institute of Scientific and Technical Information of China (English)

    CHEN ZhiHui; CHU QingXin

    2008-01-01

    The numerical stability of the extended alternating-direction-implicit-finite-difference-time-domain (ADI-FDTD) method including lumped models is analyzed.Three common lumped models are investigated:resistor,capacitor,and inductor,and three different formulations for each model are analyzed:the explicit,semi-implicit and implicit schemes.Analysis results show that the extended ADI-FDTD algorithm is not unconditionally stable in the explicit scheme case,and the stability criterion depends on the value of lumped models,but in the semi-implicit and implicit cases,the algorithm is stable.Finally,two simple microstrip circuits including lumped elements are simulated to demonstrate validity of the theoretical results.

  14. The Dynamic Modeling of Multiple Pairs of Spur Gears in Mesh, Including Friction and Geometrical Errors

    Directory of Open Access Journals (Sweden)

    Shengxiang Jia

    2003-01-01

    Full Text Available This article presents a dynamic model of three shafts and two pair of gears in mesh, with 26 degrees of freedom, including the effects of variable tooth stiffness, pitch and profile errors, friction, and a localized tooth crack on one of the gears. The article also details howgeometrical errors in teeth can be included in a model. The model incorporates the effects of variations in torsional mesh stiffness in gear teeth by using a common formula to describe stiffness that occurs as the gears mesh together. The comparison between the presence and absence of geometrical errors in teeth was made by using Matlab and Simulink models, which were developed from the equations of motion. The effects of pitch and profile errors on the resultant input pinion angular velocity coherent-signal of the input pinion's average are discussed by investigating some of the common diagnostic functions and changes to the frequency spectra results.

  15. GENII Version 2 Users’ Guide

    Energy Technology Data Exchange (ETDEWEB)

    Napier, Bruce A.

    2004-03-08

    The GENII Version 2 computer code was developed for the Environmental Protection Agency (EPA) at Pacific Northwest National Laboratory (PNNL) to incorporate the internal dosimetry models recommended by the International Commission on Radiological Protection (ICRP) and the radiological risk estimating procedures of Federal Guidance Report 13 into updated versions of existing environmental pathway analysis models. The resulting environmental dosimetry computer codes are compiled in the GENII Environmental Dosimetry System. The GENII system was developed to provide a state-of-the-art, technically peer-reviewed, documented set of programs for calculating radiation dose and risk from radionuclides released to the environment. The codes were designed with the flexibility to accommodate input parameters for a wide variety of generic sites. Operation of a new version of the codes, GENII Version 2, is described in this report. Two versions of the GENII Version 2 code system are available, a full-featured version and a version specifically designed for demonstrating compliance with the dose limits specified in 40 CFR 61.93(a), the National Emission Standards for Hazardous Air Pollutants (NESHAPS) for radionuclides. The only differences lie in the limitation of the capabilities of the user to change specific parameters in the NESHAPS version. This report describes the data entry, accomplished via interactive, menu-driven user interfaces. Default exposure and consumption parameters are provided for both the average (population) and maximum individual; however, these may be modified by the user. Source term information may be entered as radionuclide release quantities for transport scenarios, or as basic radionuclide concentrations in environmental media (air, water, soil). For input of basic or derived concentrations, decay of parent radionuclides and ingrowth of radioactive decay products prior to the start of the exposure scenario may be considered. A single code run can

  16. SAMI2-PE: A model of the ionosphere including multistream interhemispheric photoelectron transport

    Science.gov (United States)

    Varney, R. H.; Swartz, W. E.; Hysell, D. L.; Huba, J. D.

    2012-06-01

    In order to improve model comparisons with recently improved incoherent scatter radar measurements at the Jicamarca Radio Observatory we have added photoelectron transport and energy redistribution to the two dimensional SAMI2 ionospheric model. The photoelectron model uses multiple pitch angle bins, includes effects associated with curved magnetic field lines, and uses an energy degradation procedure which conserves energy on coarse, non-uniformly spaced energy grids. The photoelectron model generates secondary electron production rates and thermal electron heating rates which are then passed to the fluid equations in SAMI2. We then compare electron and ion temperatures and electron densities of this modified SAMI2 model with measurements of these parameters over a range of altitudes from 90 km to 1650 km (L = 1.26) over a 24 hour period. The new electron heating model is a significant improvement over the semi-empirical model used in SAMI2. The electron temperatures above the F-peak from the modified model qualitatively reproduce the shape of the measurements as functions of time and altitude and quantitatively agree with the measurements to within ˜30% or better during the entire day, including during the rapid temperature increase at dawn.

  17. General spherical anisotropic Jeans models of stellar kinematics: including proper motions and radial velocities

    CERN Document Server

    Cappellari, Michele

    2015-01-01

    Cappellari (2008) presented a flexible and efficient method to model the stellar kinematics of anisotropic axisymmetric and spherical stellar systems. The spherical formalism could be used to model the line-of-sight velocity second moments allowing for essentially arbitrary radial variation in the anisotropy and general luminous and total density profiles. Here we generalize the spherical formalism by providing the expressions for all three components of the projected second moments, including the two proper motion components. A reference implementation is now included in the public JAM package available at http://purl.org/cappellari/software

  18. Technical report series on global modeling and data assimilation. Volume 1: Documentation of the Goddard Earth Observing System (GEOS) General Circulation Model, version 1

    Science.gov (United States)

    Suarez, Max J. (Editor); Takacs, Lawrence L.; Molod, Andrea; Wang, Tina

    1994-01-01

    This technical report documents Version 1 of the Goddard Earth Observing System (GEOS) General Circulation Model (GCM). The GEOS-1 GCM is being used by NASA's Data Assimilation Office (DAO) to produce multiyear data sets for climate research. This report provides a documentation of the model components used in the GEOS-1 GCM, a complete description of model diagnostics available, and a User's Guide to facilitate GEOS-1 GCM experiments.

  19. Modeling Within-Host Dynamics of Influenza Virus Infection Including Immune Responses

    OpenAIRE

    Pawelek, Kasia A.; Huynh, Giao T; Michelle Quinlivan; Ann Cullinane; Libin Rong; Perelson, Alan S.

    2012-01-01

    Influenza virus infection remains a public health problem worldwide. The mechanisms underlying viral control during an uncomplicated influenza virus infection are not fully understood. Here, we developed a mathematical model including both innate and adaptive immune responses to study the within-host dynamics of equine influenza virus infection in horses. By comparing modeling predictions with both interferon and viral kinetic data, we examined the relative roles of target cell availability, ...

  20. A lumped element transformer model including core losses and winding impedances

    OpenAIRE

    Ribbenfjärd, David

    2007-01-01

    In order to design a power transformer it is important to understand its internal electromagnetic behaviour. That can be obtained by measurements on physical transformers, analytical expressions and computer simulations. One benefit with simulations is that the transformer can be studied before it is built physically and that the consequences of changing dimensions and parameters easily can be tested. In this thesis a time-domain transformer model is presented. The model includes core losses ...

  1. Target echo strength modelling at FOI, including results from the BeTSSi II workshop

    CERN Document Server

    Östberg, Martin

    2016-01-01

    An overview of the target echo strength (TS) modelling capacity at the Swedish Defense Research Agency (FOI) is presented. The modelling methods described range from approximate ones, such as raytracing and Kirchhoff approximation codes, to high accuracy full field codes including boundary integral equation methods and finite elements methods. Illustrations of the applicability of the codes are given for a few simple cases tackled during the BeTTSi II (Benchmark Target Echo Strength Simulation) workshop held in Kiel 2014.

  2. Including leakage in network models: an application to calibrate leak valves in EPANET

    OpenAIRE

    Cobacho Jordán, Ricardo; Arregui de la Cruz, Francisco; Soriano Olivares, Javier; Cabrera Rochera, Enrique

    2015-01-01

    EPANET is one of the most widely used software packages for water network hydraulic modelling, and is especially interesting for educational and research purposes because it is in the public domain. However, EPANET simulations are demand-driven, and the program does not include a specific functionality to model water leakage, which is pressure-driven. Consequently, users are required to deal with this drawback by themselves. As a general solution for this problem, this paper presents a method...

  3. Key Characteristics of Combined Accident including TLOFW accident for PSA Modeling

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Bo Gyung; Kang, Hyun Gook [KAIST, Daejeon (Korea, Republic of); Yoon, Ho Joon [Khalifa University of Science, Technology and Research, Abu Dhabi (United Arab Emirates)

    2015-05-15

    The conventional PSA techniques cannot adequately evaluate all events. The conventional PSA models usually focus on single internal events such as DBAs, the external hazards such as fire, seismic. However, the Fukushima accident of Japan in 2011 reveals that very rare event is necessary to be considered in the PSA model to prevent the radioactive release to environment caused by poor treatment based on lack of the information, and to improve the emergency operation procedure. Especially, the results from PSA can be used to decision making for regulators. Moreover, designers can consider the weakness of plant safety based on the quantified results and understand accident sequence based on human actions and system availability. This study is for PSA modeling of combined accidents including total loss of feedwater (TLOFW) accident. The TLOFW accident is a representative accident involving the failure of cooling through secondary side. If the amount of heat transfer is not enough due to the failure of secondary side, the heat will be accumulated to the primary side by continuous core decay heat. Transients with loss of feedwater include total loss of feedwater accident, loss of condenser vacuum accident, and closure of all MSIVs. When residual heat removal by the secondary side is terminated, the safety injection into the RCS with direct primary depressurization would provide alternative heat removal. This operation is called feed and bleed (F and B) operation. Combined accidents including TLOFW accident are very rare event and partially considered in conventional PSA model. Since the necessity of F and B operation is related to plant conditions, the PSA modeling for combined accidents including TLOFW accident is necessary to identify the design and operational vulnerabilities.The PSA is significant to assess the risk of NPPs, and to identify the design and operational vulnerabilities. Even though the combined accident is very rare event, the consequence of combined

  4. Geological discrete fracture network model for the Olkiluoto site, Eurajoki, Finland. Version 2.0

    Energy Technology Data Exchange (ETDEWEB)

    Fox, A.; Forchhammer, K.; Pettersson, A. [Golder Associates AB, Stockholm (Sweden); La Pointe, P.; Lim, D-H. [Golder Associates Inc. (Finland)

    2012-06-15

    This report describes the methods, analyses, and conclusions of the modeling team in the production of the 2010 revision to the geological discrete fracture network (DFN) model for the Olkiluoto Site in Finland. The geological DFN is a statistical model for stochastically simulating rock fractures and minor faults at a scale ranging from approximately 0.05 m to approximately 565m; deformation zones are expressly excluded from the DFN model. The DFN model is presented as a series of tables summarizing probability distributions for several parameters necessary for fracture modeling: fracture orientation, fracture size, fracture intensity, and associated spatial constraints. The geological DFN is built from data collected during site characterization (SC) activities at Olkiluoto, which is selected to function as a final deep geological repository for spent fuel and nuclear waste from the Finnish nuclear power program. Data used in the DFN analyses include fracture maps from surface outcrops and trenches, geological and structural data from cored drillholes, and fracture information collected during the construction of the main tunnels and shafts at the ONKALO laboratory. Unlike the initial geological DFN, which was focused on the vicinity of the ONKALO tunnel, the 2010 revisions present a model parameterization for the entire island. Fracture domains are based on the tectonic subdivisions at the site (northern, central, and southern tectonic units) presented in the Geological Site Model (GSM), and are further subdivided along the intersection of major brittle-ductile zones. The rock volume at Olkiluoto is dominated by three distinct fracture sets: subhorizontally-dipping fractures striking north-northeast and dipping to the east that is subparallel to the mean bedrock foliation direction, a subvertically-dipping fracture set striking roughly north-south, and a subvertically-dipping fracture set striking approximately east-west. The subhorizontally-dipping fractures

  5. Analysis of a generalized model for influenza including differential susceptibility due to immunosuppression

    Science.gov (United States)

    Hincapié, Doracelly; Ospina, Juan

    2014-06-01

    Recently, a mathematical model of pandemic influenza was proposed including typical control strategies such as antivirals, vaccination and school closure; and considering explicitly the effects of immunity acquired from the early outbreaks on the ulterior outbreaks of the disease. In such model the algebraic expression for the basic reproduction number (without control strategies) and the effective reproduction number (with control strategies) were derived and numerically estimated. A drawback of this model of pandemic influenza is that it ignores the effects of the differential susceptibility due to immunosuppression and the effects of the complexity of the actual contact networks between individuals. We have developed a generalized model which includes such effects of heterogeneity. Specifically we consider the influence of the air network connectivity in the spread of pandemic influenza and the influence of the immunosuppresion when the population is divided in two immune classes. We use an algebraic expression, namely the Tutte polynomial, to characterize the complexity of the contact network. Until now, The influence of the air network connectivity in the spread of pandemic influenza has been studied numerically, but not algebraic expressions have been used to summarize the level of network complexity. The generalized model proposed here includes the typical control strategies previously mentioned (antivirals, vaccination and school closure) combined with restrictions on travel. For the generalized model the corresponding reproduction numbers will be algebraically computed and the effect of the contact network will be established in terms of the Tutte polynomial of the network.

  6. A Fast and Efficient Version of the TwO-Moment Aerosol Sectional (TOMAS) Global Aerosol Microphysics Model

    Science.gov (United States)

    Lee, Yunha; Adams, P. J.

    2012-01-01

    This study develops more computationally efficient versions of the TwO-Moment Aerosol Sectional (TOMAS) microphysics algorithms, collectively called Fast TOMAS. Several methods for speeding up the algorithm were attempted, but only reducing the number of size sections was adopted. Fast TOMAS models, coupled to the GISS GCM II-prime, require a new coagulation algorithm with less restrictive size resolution assumptions but only minor changes in other processes. Fast TOMAS models have been evaluated in a box model against analytical solutions of coagulation and condensation and in a 3-D model against the original TOMAS (TOMAS-30) model. Condensation and coagulation in the Fast TOMAS models agree well with the analytical solution but show slightly more bias than the TOMAS-30 box model. In the 3-D model, errors resulting from decreased size resolution in each process (i.e., emissions, cloud processing wet deposition, microphysics) are quantified in a series of model sensitivity simulations. Errors resulting from lower size resolution in condensation and coagulation, defined as the microphysics error, affect number and mass concentrations by only a few percent. The microphysics error in CN70CN100 (number concentrations of particles larger than 70100 nm diameter), proxies for cloud condensation nuclei, range from 5 to 5 in most regions. The largest errors are associated with decreasing the size resolution in the cloud processing wet deposition calculations, defined as cloud-processing error, and range from 20 to 15 in most regions for CN70CN100 concentrations. Overall, the Fast TOMAS models increase the computational speed by 2 to 3 times with only small numerical errors stemming from condensation and coagulation calculations when compared to TOMAS-30. The faster versions of the TOMAS model allow for the longer, multi-year simulations required to assess aerosol effects on cloud lifetime and precipitation.

  7. The No-Core Gamow Shell Model: Including the continuum in the NCSM

    CERN Document Server

    Barrett, B R; Michel, N; Płoszajczak, M

    2015-01-01

    We are witnessing an era of intense experimental efforts that will provide information about the properties of nuclei far from the line of stability, regarding resonant and scattering states as well as (weakly) bound states. This talk describes our formalism for including these necessary ingredients into the No-Core Shell Model by using the Gamow Shell Model approach. Applications of this new approach, known as the No-Core Gamow Shell Model, both to benchmark cases as well as to unstable nuclei will be given.

  8. Land-total and Ocean-total Precipitation and Evaporation from a Community Atmosphere Model version 5 Perturbed Parameter Ensemble

    Energy Technology Data Exchange (ETDEWEB)

    Covey, Curt [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Lucas, Donald D. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Trenberth, Kevin E. [National Center for Atmospheric Research, Boulder, CO (United States)

    2016-03-02

    This document presents the large scale water budget statistics of a perturbed input-parameter ensemble of atmospheric model runs. The model is Version 5.1.02 of the Community Atmosphere Model (CAM). These runs are the “C-Ensemble” described by Qian et al., “Parametric Sensitivity Analysis of Precipitation at Global and Local Scales in the Community Atmosphere Model CAM5” (Journal of Advances in Modeling the Earth System, 2015). As noted by Qian et al., the simulations are “AMIP type” with temperature and sea ice boundary conditions chosen to match surface observations for the five year period 2000-2004. There are 1100 ensemble members in addition to one run with default inputparameter values.

  9. Simple geometrical explanation of Gurtin-Murdoch model of surface elasticity with clarification of its related versions

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    It is showed that all equations of the linearized Gurtin-Murdoch model of surface elasticity can be derived, in a straightforward way, from a simple second-order expression for the ratio of deformed surface area to initial surface area. This elementary derivation offers a simple explanation for all unique features of the model and its simplified/modified versions, and helps to clarify some misunderstandings of the model already occurring in the literature. Finally, it is demonstrated that, because the Gurtin-Murdoch model is based on a hybrid formulation combining linearized deformation of bulk material with 2nd-order finite deformation of the surface, caution is needed when the original form of this model is applied to bending deformation of thin-walled elastic structures with surface stress.

  10. CLMT2 user's guide: A Coupled Model for Simulation of HydraulicProcesses from Canopy to Aquifer Version 1.0

    Energy Technology Data Exchange (ETDEWEB)

    Pan, Lehua

    2006-07-26

    CLMT2 is designed to simulate the land-surface andsubsurface hydrologic response to meteorological forcing. This modelcombines a state-of-the-art land-surface model, the NCAR Community LandModel version 3 (CLM3), with a variably saturated groundwater model, theTOUGH2, through an internal interface that includes flux and statevariables shared by the two submodels. Specifically, TOUGH2, in itssimulation, uses infiltration, evaporation, and root-uptake rates,calculated by CLM3, as source/sink terms; CLM3, in its simulation, usessaturation and capillary pressure profiles, calculated by TOUGH2, asstate variables. This new model, CLMT2, preserves the best aspects ofboth submodels: the state-of-the-art modeling capability of surfaceenergy and hydrologic processes from CLM3 (including snow, runoff,freezing/melting, evapotranspiration, radiation, and biophysiologicalprocesses) and the more realistic physical-process-based modelingcapability of subsurface hydrologic processes from TOUGH2 (includingheterogeneity, three-dimensional flow, seamless combining of unsaturatedand saturated zone, and water table). The preliminary simulation resultsshow that the coupled model greatly improved the predictions of the watertable, evapotranspiration, and surface temperature at a real watershed,as evaluated using 18 years of observed data. The new model is also readyto be coupled with an atmospheric simulation model, representing one ofthe first models that are capable to simulate hydraulic processes fromtop of the atmosphere to deep-ground.

  11. The Watts-Strogatz network model developed by including degree distribution: theory and computer simulation

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Y W [Surface Physics Laboratory and Department of Physics, Fudan University, Shanghai 200433 (China); Zhang, L F [Surface Physics Laboratory and Department of Physics, Fudan University, Shanghai 200433 (China); Huang, J P [Surface Physics Laboratory and Department of Physics, Fudan University, Shanghai 200433 (China)

    2007-07-20

    By using theoretical analysis and computer simulations, we develop the Watts-Strogatz network model by including degree distribution, in an attempt to improve the comparison between characteristic path lengths and clustering coefficients predicted by the original Watts-Strogatz network model and those of the real networks with the small-world property. Good agreement between the predictions of the theoretical analysis and those of the computer simulations has been shown. It is found that the developed Watts-Strogatz network model can fit the real small-world networks more satisfactorily. Some other interesting results are also reported by adjusting the parameters in a model degree-distribution function. The developed Watts-Strogatz network model is expected to help in the future analysis of various social problems as well as financial markets with the small-world property.

  12. Dynamics Analysis of an HIV Infection Model including Infected Cells in an Eclipse Stage

    Directory of Open Access Journals (Sweden)

    Shengyu Zhou

    2013-01-01

    Full Text Available In this paper, an HIV infection model including an eclipse stage of infected cells is considered. Some quicker cells in this stage become productively infected cells, a portion of these cells are reverted to the uninfected class, and others will be latent down in the body. We consider CTL-response delay in this model and analyze the effect of time delay on stability of equilibrium. It is shown that the uninfected equilibrium and CTL-absent infection equilibrium are globally asymptotically stable for both ODE and DDE model. And we get the global stability of the CTL-present equilibrium for ODE model. For DDE model, we have proved that the CTL-present equilibrium is locally asymptotically stable in a range of delays and also have studied the existence of Hopf bifurcations at the CTL-present equilibrium. Numerical simulations are carried out to support our main results.

  13. Modeling of the dynamics of wind to power conversion including high wind speed behavior

    DEFF Research Database (Denmark)

    Litong-Palima, Marisciel; Bjerge, Martin Huus; Cutululis, Nicolaos Antonio

    2016-01-01

    of power system studies, but the idea of the proposed wind turbine model is to include the main dynamic effects in order to have a better representation of the fluctuations in the output power and of the fast power ramping especially because of high wind speed shutdowns of the wind turbine. The high wind......This paper proposes and validates an efficient, generic and computationally simple dynamic model for the conversion of the wind speed at hub height into the electrical power by a wind turbine. This proposed wind turbine model was developed as a first step to simulate wind power time series...... for power system studies. This paper focuses on describing and validating the single wind turbine model, and is therefore neither describing wind speed modeling nor aggregation of contributions from a whole wind farm or a power system area. The state-of-the-art is to use static power curves for the purpose...

  14. The Nexus Land-Use model version 1.0, an approach articulating biophysical potentials and economic dynamics to model competition for land-use

    Directory of Open Access Journals (Sweden)

    F. Souty

    2012-02-01

    Full Text Available Interactions between food demand, biomass energy and forest preservation are driving both food prices and land-use changes, regionally and globally. This study presents a new model called Nexus Land-Use version 1.0 which describes these interactions through a generic representation of agricultural intensification mechanisms. The Nexus Land-Use model equations combine biophysics and economics into a single coherent framework to calculate crop yields, food prices, and resulting pasture and cropland areas within 12 regions inter-connected with each other by international trade. The representation of cropland and livestock production systems in each region relies on three components: (i a biomass production function derived from the crop yield response function to inputs such as industrial fertilisers; (ii a detailed representation of the livestock production system subdivided into an intensive and an extensive component, and (iii a spatially explicit distribution of potential (maximal crop yields prescribed from the Lund-Postdam-Jena global vegetation model for managed Land (LPJmL. The economic principles governing decisions about land-use and intensification are adapted from the Ricardian rent theory, assuming cost minimisation for farmers. The land-use modelling approach described in this paper entails several advantages. Firstly, it makes it possible to explore interactions among different types of biomass demand for food and animal feed, in a consistent approach, including indirect effects on land-use change resulting from international trade. Secondly, yield variations induced by the possible expansion of croplands on less suitable marginal lands are modelled by using regional land area distributions of potential yields, and a calculated boundary between intensive and extensive production. The model equations and parameter values are first described in details. Then, idealised scenarios exploring the impact of forest preservation policies or

  15. Land Boundary Conditions for the Goddard Earth Observing System Model Version 5 (GEOS-5) Climate Modeling System: Recent Updates and Data File Descriptions

    Science.gov (United States)

    Mahanama, Sarith P.; Koster, Randal D.; Walker, Gregory K.; Takacs, Lawrence L.; Reichle, Rolf H.; De Lannoy, Gabrielle; Liu, Qing; Zhao, Bin; Suarez, Max J.

    2015-01-01

    The Earths land surface boundary conditions in the Goddard Earth Observing System version 5 (GEOS-5) modeling system were updated using recent high spatial and temporal resolution global data products. The updates include: (i) construction of a global 10-arcsec land-ocean lakes-ice mask; (ii) incorporation of a 10-arcsec Globcover 2009 land cover dataset; (iii) implementation of Level 12 Pfafstetter hydrologic catchments; (iv) use of hybridized SRTM global topography data; (v) construction of the HWSDv1.21-STATSGO2 merged global 30 arc second soil mineral and carbon data in conjunction with a highly-refined soil classification system; (vi) production of diffuse visible and near-infrared 8-day MODIS albedo climatologies at 30-arcsec from the period 2001-2011; and (vii) production of the GEOLAND2 and MODIS merged 8-day LAI climatology at 30-arcsec for GEOS-5. The global data sets were preprocessed and used to construct global raster data files for the software (mkCatchParam) that computes parameters on catchment-tiles for various atmospheric grids. The updates also include a few bug fixes in mkCatchParam, as well as changes (improvements in algorithms, etc.) to mkCatchParam that allow it to produce tile-space parameters efficiently for high resolution AGCM grids. The update process also includes the construction of data files describing the vegetation type fractions, soil background albedo, nitrogen deposition and mean annual 2m air temperature to be used with the future Catchment CN model and the global stream channel network to be used with the future global runoff routing model. This report provides detailed descriptions of the data production process and data file format of each updated data set.

  16. Theoretical modelling of epigenetically modified DNA sequences [version 2; referees: 2 approved

    Directory of Open Access Journals (Sweden)

    Alexandra Teresa Pires Carvalho

    2015-05-01

    Full Text Available We report herein a set of calculations designed to examine the effects of epigenetic modifications on the structure of DNA. The incorporation of methyl, hydroxymethyl, formyl and carboxy substituents at the 5-position of cytosine is shown to hardly affect the geometry of CG base pairs, but to result in rather larger changes to hydrogen-bond and stacking binding energies, as predicted by dispersion-corrected density functional theory (DFT methods. The same modifications within double-stranded GCG and ACA trimers exhibit rather larger structural effects, when including the sugar-phosphate backbone as well as sodium counterions and implicit aqueous solvation. In particular, changes are observed in the buckle and propeller angles within base pairs and the slide and roll values of base pair steps, but these leave the overall helical shape of DNA essentially intact. The structures so obtained are useful as a benchmark of faster methods, including molecular mechanics (MM and hybrid quantum mechanics/molecular mechanics (QM/MM methods. We show that previously developed MM parameters satisfactorily reproduce the trimer structures, as do QM/MM calculations which treat bases with dispersion-corrected DFT and the sugar-phosphate backbone with AMBER. The latter are improved by inclusion of all six bases in the QM region, since a truncated model including only the central CG base pair in the QM region is considerably further from the DFT structure. This QM/MM method is then applied to a set of double-stranded DNA heptamers derived from a recent X-ray crystallographic study, whose size puts a DFT study beyond our current computational resources. These data show that still larger structural changes are observed than in base pairs or trimers, leading us to conclude that it is important to model epigenetic modifications within realistic molecular contexts.

  17. Refinement and evaluation of the Massachusetts firm-yield estimator model version 2.0

    Science.gov (United States)

    Levin, Sara B.; Archfield, Stacey A.; Massey, Andrew J.

    2011-01-01

    The firm yield is the maximum average daily withdrawal that can be extracted from a reservoir without risk of failure during an extended drought period. Previously developed procedures for determining the firm yield of a reservoir were refined and applied to 38 reservoir systems in Massachusetts, including 25 single- and multiple-reservoir systems that were examined during previous studies and 13 additional reservoir systems. Changes to the firm-yield model include refinements to the simulation methods and input data, as well as the addition of several scenario-testing capabilities. The simulation procedure was adapted to run at a daily time step over a 44-year simulation period, and daily streamflow and meteorological data were compiled for all the reservoirs for input to the model. Another change to the model-simulation methods is the adjustment of the scaling factor used in estimating groundwater contributions to the reservoir. The scaling factor is used to convert the daily groundwater-flow rate into a volume by multiplying the rate by the length of reservoir shoreline that is hydrologically connected to the aquifer. Previous firm-yield analyses used a constant scaling factor that was estimated from the reservoir surface area at full pool. The use of a constant scaling factor caused groundwater flows during periods when the reservoir stage was very low to be overestimated. The constant groundwater scaling factor used in previous analyses was replaced with a variable scaling factor that is based on daily reservoir stage. This change reduced instability in the groundwater-flow algorithms and produced more realistic groundwater-flow contributions during periods of low storage. Uncertainty in the firm-yield model arises from many sources, including errors in input data. The sensitivity of the model to uncertainty in streamflow input data and uncertainty in the stage-storage relation was examined. A series of Monte Carlo simulations were performed on 22 reservoirs

  18. A statistical model including age to predict passenger postures in the rear seats of automobiles.

    Science.gov (United States)

    Park, Jangwoon; Ebert, Sheila M; Reed, Matthew P; Hallman, Jason J

    2016-06-01

    Few statistical models of rear seat passenger posture have been published, and none has taken into account the effects of occupant age. This study developed new statistical models for predicting passenger postures in the rear seats of automobiles. Postures of 89 adults with a wide range of age and body size were measured in a laboratory mock-up in seven seat configurations. Posture-prediction models for female and male passengers were separately developed by stepwise regression using age, body dimensions, seat configurations and two-way interactions as potential predictors. Passenger posture was significantly associated with age and the effects of other two-way interaction variables depended on age. A set of posture-prediction models are presented for women and men, and the prediction results are compared with previously published models. This study is the first study of passenger posture to include a large cohort of older passengers and the first to report a significant effect of age for adults. The presented models can be used to position computational and physical human models for vehicle design and assessment. Practitioner Summary: The significant effects of age, body dimensions and seat configuration on rear seat passenger posture were identified. The models can be used to accurately position computational human models or crash test dummies for older passengers in known rear seat configurations.

  19. EIA model documentation: World oil refining logistics demand model,``WORLD`` reference manual. Version 1.1

    Energy Technology Data Exchange (ETDEWEB)

    1994-04-11

    This manual is intended primarily for use as a reference by analysts applying the WORLD model to regional studies. It also provides overview information on WORLD features of potential interest to managers and analysts. Broadly, the manual covers WORLD model features in progressively increasing detail. Section 2 provides an overview of the WORLD model, how it has evolved, what its design goals are, what it produces, and where it can be taken with further enhancements. Section 3 reviews model management covering data sources, managing over-optimization, calibration and seasonality, check-points for case construction and common errors. Section 4 describes in detail the WORLD system, including: data and program systems in overview; details of mainframe and PC program control and files;model generation, size management, debugging and error analysis; use with different optimizers; and reporting and results analysis. Section 5 provides a detailed description of every WORLD model data table, covering model controls, case and technology data. Section 6 goes into the details of WORLD matrix structure. It provides an overview, describes how regional definitions are controlled and defines the naming conventions for-all model rows, columns, right-hand sides, and bounds. It also includes a discussion of the formulation of product blending and specifications in WORLD. Several Appendices supplement the main sections.

  20. A new version of variational integrated technology for environmental modeling with assimilation of available data

    Science.gov (United States)

    Penenko, Vladimir; Tsvetova, Elena; Penenko, Aleksey

    2014-05-01

    A modeling technology based on coupled models of atmospheric dynamics and chemistry are presented [1-3]. It is the result of application of variational methods in combination with the methods of decomposition and splitting. The idea of Euler's integrating factors combined with technique of adjoint problems is also used. In online technologies, a significant part of algorithmic and computational work consist in solving the problems like convection-diffusion-reaction and in organizing data assimilation techniques based on them. For equations of convection-diffusion, the methodology gives us the unconditionally stable and monotone discrete-analytical schemes in the frames of methods of decomposition and splitting. These schemes are exact for locally one-dimensional problems respect to the spatial variables. For stiff systems of equations describing transformation of gas and aerosol substances, the monotone and stable schemes are also obtained. They are implemented by non- iterative algorithms. By construction, all schemes for different components of state functions are structurally uniform. They are coordinated among themselves in the sense of forward and inverse modeling. Variational principles are constructed taking into account the fact that the behavior of the different dynamic and chemical components of the state function is characterized by high variability and uncertainty. Information on the parameters of models, sources and emission impacts is also not determined precisely. Therefore, to obtain the consistent solutions, we construct methods of the sensitivity theory taking into account the influence of uncertainty. For this purpose, new methods of data assimilation of hydrodynamic fields and gas-aerosol substances measured by different observing systems are proposed. Optimization criteria for data assimilation problems are defined so that they include a set of functionals evaluating the total measure of uncertainties. The latter are explicitly introduced into

  1. Modelling turbulent vertical mixing sensitivity using a 1-D version of NEMO

    Directory of Open Access Journals (Sweden)

    G. Reffray

    2014-08-01

    Full Text Available Through two numerical experiments, a 1-D vertical model called NEMO1D was used to investigate physical and numerical turbulent-mixing behaviour. The results show that all the turbulent closures tested (k + l from Blanke and Delecluse, 1993 and two equation models: Generic Lengh Scale closures from Umlauf and Burchard, 2003 are able to correctly reproduce the classical test of Kato and Phillips (1969 under favourable numerical conditions while some solutions may diverge depending on the degradation of the spatial and time discretization. The performances of turbulence models were then compared with data measured over a one-year period (mid-2010 to mid-2011 at the PAPA station, located in the North Pacific Ocean. The modelled temperature and salinity were in good agreement with the observations, with a maximum temperature error between −2 and 2 °C during the stratified period (June to October. However the results also depend on the numerical conditions. The vertical RMSE varied, for different turbulent closures, from 0.1 to 0.3 °C during the stratified period and from 0.03 to 0.15 °C during the homogeneous period. This 1-D configuration at the PAPA station (called PAPA1D is now available in NEMO as a reference configuration including the input files and atmospheric forcing set described in this paper. Thus, all the results described can be recovered by downloading and launching PAPA1D. The configuration is described on the NEMO site (http://www.nemo-ocean.eu/Using-NEMO/Configurations/C1D_PAPA. This package is a good starting point for further investigation of vertical processes.

  2. Innovative Liner Concepts: Experiments and Impedance Modeling of Liners Including the Effect of Bias Flow

    Science.gov (United States)

    Kelly, Jeff; Betts, Juan Fernando; Fuller, Chris

    2000-01-01

    The study of normal impedance of perforated plate acoustic liners including the effect of bias flow was studied. Two impedance models were developed by modeling the internal flows of perforate orifices as infinite tubes with the inclusion of end corrections to handle finite length effects. These models assumed incompressible and compressible flows, respectively, between the far field and the perforate orifice. The incompressible model was used to predict impedance results for perforated plates with percent open areas ranging from 5% to 15%. The predicted resistance results showed better agreement with experiments for the higher percent open area samples. The agreement also tended to deteriorate as bias flow was increased. For perforated plates with percent open areas ranging from 1% to 5%, the compressible model was used to predict impedance results. The model predictions were closer to the experimental resistance results for the 2% to 3% open area samples. The predictions tended to deteriorate as bias flow was increased. The reactance results were well predicted by the models for the higher percent open area, but deteriorated as the percent open area was lowered (5%) and bias flow was increased. A fit was done on the incompressible model to the experimental database. The fit was performed using an optimization routine that found the optimal set of multiplication coefficients to the non-dimensional groups that minimized the least squares slope error between predictions and experiments. The result of the fit indicated that terms not associated with bias flow required a greater degree of correction than the terms associated with the bias flow. This model improved agreement with experiments by nearly 15% for the low percent open area (5%) samples when compared to the unfitted model. The fitted model and the unfitted model performed equally well for the higher percent open area (10% and 15%).

  3. MEMLS3&a: Microwave Emission Model of Layered Snowpacks adapted to include backscattering

    Directory of Open Access Journals (Sweden)

    M. Proksch

    2015-08-01

    Full Text Available The Microwave Emission Model of Layered Snowpacks (MEMLS was originally developed for microwave emissions of snowpacks in the frequency range 5–100 GHz. It is based on six-flux theory to describe radiative transfer in snow including absorption, multiple volume scattering, radiation trapping due to internal reflection and a combination of coherent and incoherent superposition of reflections between horizontal layer interfaces. Here we introduce MEMLS3&a, an extension of MEMLS, which includes a backscatter model for active microwave remote sensing of snow. The reflectivity is decomposed into diffuse and specular components. Slight undulations of the snow surface are taken into account. The treatment of like- and cross-polarization is accomplished by an empirical splitting parameter q. MEMLS3&a (as well as MEMLS is set up in a way that snow input parameters can be derived by objective measurement methods which avoid fitting procedures of the scattering efficiency of snow, required by several other models. For the validation of the model we have used a combination of active and passive measurements from the NoSREx (Nordic Snow Radar Experiment campaign in Sodankylä, Finland. We find a reasonable agreement between the measurements and simulations, subject to uncertainties in hitherto unmeasured input parameters of the backscatter model. The model is written in Matlab and the code is publicly available for download through the following website: http://www.iapmw.unibe.ch/research/projects/snowtools/memls.html.

  4. MEMLS3&a: Microwave Emission Model of Layered Snowpacks adapted to include backscattering

    Directory of Open Access Journals (Sweden)

    M. Proksch

    2015-03-01

    Full Text Available The Microwave Emission Model of Layered Snowpacks (MEMLS was originally developed for microwave emissions of snowpacks in the frequency range 5–100 GHz. It is based on six-flux theory to describe radiative transfer in snow including absorption, multiple volume scattering, radiation trapping due to internal reflection and a combination of coherent and incoherent superposition of reflections between horizontal layer interfaces. Here we introduce MEMLS3&a, an extension of MEMLS, which includes a backscatter model for active microwave remote sensing of snow. The reflectivity is decomposed into diffuse and specular components. Slight undulations of the snow surface are taken into account. The treatment of like and cross polarization is accomplished by an empirical splitting parameter q. MEMLS3&a (as well as MEMLS is set up in a way that snow input parameters can be derived by objective measurement methods which avoids fitting procedures of the scattering efficiency of snow, required by several other models. For the validation of the model we have used a combination of active and passive measurements from the NoSREx campaign in Sodankylä, Finland. We find a reasonable agreement between the measurements and simulations, subject to uncertainties in hitherto unmeasured input parameters of the backscatter model. The model is written in MATLAB and the code is publicly available for download through the following website: http://www.iapmw.unibe.ch/research/projects/snowtools/memls.html.

  5. MEMLS3&a: Microwave Emission Model of Layered Snowpacks adapted to include backscattering

    Science.gov (United States)

    Proksch, M.; Mätzler, C.; Wiesmann, A.; Lemmetyinen, J.; Schwank, M.; Löwe, H.; Schneebeli, M.

    2015-08-01

    The Microwave Emission Model of Layered Snowpacks (MEMLS) was originally developed for microwave emissions of snowpacks in the frequency range 5-100 GHz. It is based on six-flux theory to describe radiative transfer in snow including absorption, multiple volume scattering, radiation trapping due to internal reflection and a combination of coherent and incoherent superposition of reflections between horizontal layer interfaces. Here we introduce MEMLS3&a, an extension of MEMLS, which includes a backscatter model for active microwave remote sensing of snow. The reflectivity is decomposed into diffuse and specular components. Slight undulations of the snow surface are taken into account. The treatment of like- and cross-polarization is accomplished by an empirical splitting parameter q. MEMLS3&a (as well as MEMLS) is set up in a way that snow input parameters can be derived by objective measurement methods which avoid fitting procedures of the scattering efficiency of snow, required by several other models. For the validation of the model we have used a combination of active and passive measurements from the NoSREx (Nordic Snow Radar Experiment) campaign in Sodankylä, Finland. We find a reasonable agreement between the measurements and simulations, subject to uncertainties in hitherto unmeasured input parameters of the backscatter model. The model is written in Matlab and the code is publicly available for download through the following website: http://www.iapmw.unibe.ch/research/projects/snowtools/memls.html.

  6. Steady-state analysis of activated sludge processes with a settler model including sludge compression.

    Science.gov (United States)

    Diehl, S; Zambrano, J; Carlsson, B

    2016-01-01

    A reduced model of a completely stirred-tank bioreactor coupled to a settling tank with recycle is analyzed in its steady states. In the reactor, the concentrations of one dominant particulate biomass and one soluble substrate component are modelled. While the biomass decay rate is assumed to be constant, growth kinetics can depend on both substrate and biomass concentrations, and optionally model substrate inhibition. Compressive and hindered settling phenomena are included using the Bürger-Diehl settler model, which consists of a partial differential equation. Steady-state solutions of this partial differential equation are obtained from an ordinary differential equation, making steady-state analysis of the entire plant difficult. A key result showing that the ordinary differential equation can be replaced with an approximate algebraic equation simplifies model analysis. This algebraic equation takes the location of the sludge-blanket during normal operation into account, allowing for the limiting flux capacity caused by compressive settling to easily be included in the steady-state mass balance equations for the entire plant system. This novel approach grants the possibility of more realistic solutions than other previously published reduced models, comprised of yet simpler settler assumptions. The steady-state concentrations, solids residence time, and the wastage flow ratio are functions of the recycle ratio. Solutions are shown for various growth kinetics; with different values of biomass decay rate, influent volumetric flow, and substrate concentration.

  7. Latest cosmological constraints on Cardassian expansion models including the updated gamma-ray bursts

    Institute of Scientific and Technical Information of China (English)

    Nan Liang; Pu-Xun Wua; Zong-Hong Zhu

    2011-01-01

    We constrain the Cardassian expansion models from the latest observations,including the updated Gamma-ray bursts (GRBs),which are calibrated using a cosmology independent method from the Union2 compilation of type Ia supernovae (SNe Ia).By combining the GRB data with the joint observations from the Union2SNe Ia set,along with the results from the Cosmic Microwave Background radiation observation from the seven-year Wilkinson Microwave Anisotropy Probe and the baryonic acoustic oscillation observation galaxy sample from the spectroscopic Sloan Digital Sky Survey Data Release,we find significant constraints on the model parameters of the original Cardassian model ΩM0=n 282+0.015-0.014,n=0.03+0.05-0.05;and n = -0.16+0.25-3.26,β=-0.76+0.34-0.58 of the modified polytropic Cardassian model,which are consistent with the ACDM model in a l-σ confidence region.From the reconstruction of the deceleration parameter q(z) in Cardassian models,we obtain the transition redshift ZT = 0.73 ± 0.04 for the original Cardassian model and ZT = 0.68 ± 0.04 for the modified polytropic Cardassian model.

  8. Safe distance car-following model including backward-looking and its stability analysis

    Science.gov (United States)

    Yang, Da; Jin, Peter Jing; Pu, Yun; Ran, Bin

    2013-03-01

    The focus of this paper is the car-following behavior including backward-looking, simply called the bi-directional looking car-following behavior. This study is motivated by the potential changes of the physical properties of traffic flow caused by the fast developing intelligent transportation system (ITS), especially the new connected vehicle technology. Existing studies on this topic focused on general motors (GM) models and optimal velocity (OV) models. The safe distance car-following model, Gipps' model, which is more widely used in practice have not drawn too much attention in the bi-directional looking context. This paper explores the property of the bi-directional looking extension of Gipps' safe distance model. The stability condition of the proposed model is derived using the linear stability theory and is verified using numerical simulations. The impacts of the driver and vehicle characteristics appeared in the proposed model on the traffic flow stability are also investigated. It is found that taking into account the backward-looking effect in car-following has three types of effect on traffic flow: stabilizing, destabilizing and producing non-physical phenomenon. This conclusion is more sophisticated than the study results based on the OV bi-directional looking car-following models. Moreover, the drivers who have the smaller reaction time or the larger additional delay and think the other vehicles have larger maximum decelerations can stabilize traffic flow.

  9. Stochastic empirical loading and dilution model (SELDM) version 1.0.0

    Science.gov (United States)

    Granato, Gregory E.

    2013-01-01

    The Stochastic Empirical Loading and Dilution Model (SELDM) is designed to transform complex scientific data into meaningful information about the risk of adverse effects of runoff on receiving waters, the potential need for mitigation measures, and the potential effectiveness of such management measures for reducing these risks. The U.S. Geological Survey developed SELDM in cooperation with the Federal Highway Administration to help develop planning-level estimates of event mean concentrations, flows, and loads in stormwater from a site of interest and from an upstream basin. Planning-level estimates are defined as the results of analyses used to evaluate alternative management measures; planning-level estimates are recognized to include substantial uncertainties (commonly orders of magnitude). SELDM uses information about a highway site, the associated receiving-water basin, precipitation events, stormflow, water quality, and the performance of mitigation measures to produce a stochastic population of runoff-quality variables. SELDM provides input statistics for precipitation, prestorm flow, runoff coefficients, and concentrations of selected water-quality constituents from National datasets. Input statistics may be selected on the basis of the latitude, longitude, and physical characteristics of the site of interest and the upstream basin. The user also may derive and input statistics for each variable that are specific to a given site of interest or a given area. SELDM is a stochastic model because it uses Monte Carlo methods to produce the random combinations of input variable values needed to generate the stochastic population of values for each component variable. SELDM calculates the dilution of runoff in the receiving waters and the resulting downstream event mean concentrations and annual average lake concentrations. Results are ranked, and plotting positions are calculated, to indicate the level of risk of adverse effects caused by runoff concentrations

  10. A Lumped Thermal Model Including Thermal Coupling and Thermal Boundary Conditions for High Power IGBT Modules

    DEFF Research Database (Denmark)

    Bahman, Amir Sajjad; Ma, Ke; Blaabjerg, Frede

    2017-01-01

    Detailed thermal dynamics of high power IGBT modules are important information for the reliability analysis and thermal design of power electronic systems. However, the existing thermal models have their limits to correctly predict these complicated thermal behavior in the IGBTs: The typically used...... thermal distribution under long-term studies. Meanwhile the boundary conditions for the thermal analysis are modeled and included, which can be adapted to different real field applications of power electronic converters. Finally, the accuracy of the proposed thermal model is verified by FEM simulations...... thermal model based on one-dimensional RC lumps have limits to provide temperature distributions inside the device, moreover some variable factors in the real-field applications like the cooling and heating conditions of the converter cannot be adapted. On the other hand, the more advanced three...

  11. A Lumped Thermal Model Including Thermal Coupling and Thermal Boundary Conditions for High Power IGBT Modules

    DEFF Research Database (Denmark)

    Bahman, Amir Sajjad; Ma, Ke; Blaabjerg, Frede

    2017-01-01

    Detailed thermal dynamics of high power IGBT modules are important information for the reliability analysis and thermal design of power electronic systems. However, the existing thermal models have their limits to correctly predict these complicated thermal behavior in the IGBTs: The typically used...... thermal distribution under long-term studies. Meanwhile the boundary conditions for the thermal analysis are modeled and included, which can be adapted to different real-field applications of power electronic converters. Finally, the accuracy of the proposed thermal model is verified by FEM simulations...... thermal model based on one-dimensional RC lumps have limits to provide temperature distributions inside the device, moreover some variable factors in the real-field applications like the cooling and heating conditions of the converter cannot be adapted. On the other hand, the more advanced three...

  12. Modifications to the steady-state 41-node thermoregulatory model including validation of the respiratory and diffusional water loss equations

    Science.gov (United States)

    1974-01-01

    After the simplified version of the 41-Node Stolwijk Metabolic Man Model was implemented on the Sigma 3 and UNIVAC 1110 computers in batch mode, it became desirable to make certain revisions. First, the availability of time-sharing terminals makes it possible to provide the capability and flexibility of conversational interaction between user and model. Secondly, recent physiological studies show the need to revise certain parameter values contained in the model. Thirdly, it was desired to make quantitative and accurate predictions of evaporative water loss for humans in an orbiting space station. The result of the first phase of this effort are reported.

  13. Transmission line model for strained quantum well lasers including carrier transport and carrier heating effects.

    Science.gov (United States)

    Xia, Mingjun; Ghafouri-Shiraz, H

    2016-03-01

    This paper reports a new model for strained quantum well lasers, which are based on the quantum well transmission line modeling method where effects of both carrier transport and carrier heating have been included. We have applied this new model and studied the effect of carrier transport on the output waveform of a strained quantum well laser both in time and frequency domains. It has been found that the carrier transport increases the turn-on, turn-off delay times and damping of the quantum well laser transient response. Also, analysis in the frequency domain indicates that the carrier transport causes the output spectrum of the quantum well laser in steady state to exhibit a redshift which has a narrower bandwidth and lower magnitude. The simulation results of turning-on transients obtained by the proposed model are compared with those obtained by the rate equation laser model. The new model has also been used to study the effects of pump current spikes on the laser output waveforms properties, and it was found that the presence of current spikes causes (i) wavelength blueshift, (ii) larger bandwidth, and (iii) reduces the magnitude and decreases the side-lobe suppression ratio of the laser output spectrum. Analysis in both frequency and time domains confirms that the new proposed model can accurately predict the temporal and spectral behaviors of strained quantum well lasers.

  14. A numerical model including PID control of a multizone crystal growth furnace

    Science.gov (United States)

    Panzarella, Charles H.; Kassemi, Mohammad

    This paper presents a 2D axisymmetric combined conduction and radiation model of a multizone crystal growth furnace. The model is based on a programmable multizone furnace (PMZF) designed and built at NASA Lewis Research Center for growing high quality semiconductor crystals. A novel feature of this model is a control algorithm which automatically adjusts the power in any number of independently controlled heaters to establish the desired crystal temperatures in the furnace model. The control algorithm eliminates the need for numerous trial and error runs previously required to obtain the same results. The finite element code, FIDAP, used to develop the furnace model, was modified to directly incorporate the control algorithm. This algorithm, which presently uses PID control, and the associated heat transfer model are briefly discussed. Together, they have been used to predict the heater power distributions for a variety of furnace configurations and desired temperature profiles. Examples are included to demonstrate the effectiveness of the PID controlled model in establishing isothermal, Bridgman, and other complicated temperature profies in the sample. Finally, an example is given to show how the algorithm can be used to change the desired profile with time according to a prescribed temperature-time evolution.

  15. A continuum model of solvation energies including electrostatic, dispersion, and cavity contributions.

    Science.gov (United States)

    Duignan, Timothy T; Parsons, Drew F; Ninham, Barry W

    2013-08-15

    Physically accurate continuum solvent models that can calculate solvation energies are crucial to explain and predict the behavior of solute particles in water. Here, we present such a model applied to small spherical ions and neutral atoms. It improves upon a basic Born electrostatic model by including a standard cavity energy and adding a dispersion component, consistent with the Born electrostatic energy and using the same cavity size parameter. We show that the well-known, puzzling differences between the solvation energies of ions of the same size is attributable to the neglected dispersion contribution. This depends on dynamic polarizability as well as size. Generally, a large cancellation exists between the cavity and dispersion contributions. This explains the surprising success of the Born model. The model accurately reproduces the solvation energies of the alkali halide ions, as well as the silver(I) and copper(I) ions with an error of 12 kJ mol(-1) (±3%). The solvation energy of the noble gases is also reproduced with an error of 2.6 kJ mol(-1) (±30%). No arbitrary fitting parameters are needed to achieve this. This model significantly improves our understanding of ionic solvation and forms a solid basis for the investigation of other ion-specific effects using a continuum solvent model.

  16. Model for resistance evolution in shape memory alloys including R-phase

    Science.gov (United States)

    Brammajyosula, Ravindra; Buravalla, Vidyashankar; Khandelwal, Ashish

    2011-03-01

    The electrical resistance behavior of a shape memory alloy (SMA) wire can be used for sensing the state of an SMA device. Hence, this study investigates the resistance evolution in SMAs. A lumped parameter model with cosine kinetics to capture the resistance variation during the phase transformation is developed. Several SMA materials show the presence of trigonal or rhombohedral (R) phase as an intermediate phase, apart from the commonly recognized austenite and martensite phases. Most of the SMA models ignore the R-phase effect in their prediction of thermomechanical response. This may be acceptable since the changes in thermomechanical response associated with the R-phase are relatively less. However, the resistivity related effects are pronounced in the presence of the R-phase and its appearance introduces non-monotonicity in the resistivity evolution. This leads to additional complexities in the use of resistance signal for sensing and control. Hence, a lumped model is developed here for resistance evolution including the R-phase effects. A phase-diagram-based model is proposed for predicting electro-thermomechanical response. Both steady state hysteretic response and transient response are modeled. The model predictions are compared with the available test data. Numerical studies have shown that the model is able to capture all the essential features of the resistance evolution in SMAs in the presence of the R-phase.

  17. A New Circuit Model for Spin-Torque Oscillator Including Perpendicular Torque of Magnetic Tunnel Junction

    Directory of Open Access Journals (Sweden)

    Hyein Lim

    2013-01-01

    Full Text Available Spin-torque oscillator (STO is a promising new technology for the future RF oscillators, which is based on the spin-transfer torque (STT effect in magnetic multilayered nanostructure. It is expected to provide a larger tunability, smaller size, lower power consumption, and higher level of integration than the semiconductor-based oscillators. In our previous work, a circuit-level model of the giant magnetoresistance (GMR STO was proposed. In this paper, we present a physics-based circuit-level model of the magnetic tunnel junction (MTJ-based STO. MTJ-STO model includes the effect of perpendicular torque that has been ignored in the GMR-STO model. The variations of three major characteristics, generation frequency, mean oscillation power, and generation linewidth of an MTJ-STO with respect to the amount of perpendicular torque, are investigated, and the results are applied to our model. The operation of the model was verified by HSPICE simulation, and the results show an excellent agreement with the experimental data. The results also prove that a full circuit-level simulation with MJT-STO devices can be made with our proposed model.

  18. Does including physiology improve species distribution model predictions of responses to recent climate change?

    Science.gov (United States)

    Buckley, Lauren B; Waaser, Stephanie A; MacLean, Heidi J; Fox, Richard

    2011-12-01

    Thermal constraints on development are often invoked to predict insect distributions. These constraints tend to be characterized in species distribution models (SDMs) by calculating development time based on a constant lower development temperature (LDT). Here, we assessed whether species-specific estimates of LDT based on laboratory experiments can improve the ability of SDMs to predict the distribution shifts of six U.K. butterflies in response to recent climate warming. We find that species-specific and constant (5 degrees C) LDT degree-day models perform similarly at predicting distributions during the period of 1970-1982. However, when the models for the 1970-1982 period are projected to predict distributions in 1995-1999 and 2000-2004, species-specific LDT degree-day models modestly outperform constant LDT degree-day models. Our results suggest that, while including species-specific physiology in correlative models may enhance predictions of species' distribution responses to climate change, more detailed models may be needed to adequately account for interspecific physiological differences.

  19. Modeling of single char combustion, including CO oxidation in its boundary layer

    Energy Technology Data Exchange (ETDEWEB)

    Lee, C.H.; Longwell, J.P.; Sarofim, A.F.

    1994-10-25

    The combustion of a char particle can be divided into a transient phase where its temperature increases as it is heated by oxidation, and heat transfer from the surrounding gas to an approximately constant temperature stage where gas phase reaction is important and which consumes most of the carbon and an extinction stage caused by carbon burnout. In this work, separate models were developed for the transient heating where gas phase reactions were unimportant and for the steady temperature stage where gas phase reactions were treated in detail. The transient char combustion model incorporates intrinsic char surface production of CO and CO{sub 2}, internal pore diffusion and external mass and heat transfer. The model provides useful information for particle ignition, burning temperature profile, combustion time, and carbon consumption rate. A gas phase reaction model incorporating the full set of 28 elementary C/H/O reactions was developed. This model calculated the gas phase CO oxidation reaction in the boundary layer at particle temperatures of 1250 K and 2500 K by using the carbon consumption rate and the burning temperature at the pseudo-steady state calculated from the temperature profile model but the transient heating was not included. This gas phase model can predict the gas species, and the temperature distributions in the boundary layer, the CO{sub 2}/CO ratio, and the location of CO oxidation. A mechanistic heat and mass transfer model was added to the temperature profile model to predict combustion behavior in a fluidized bed. These models were applied to data from the fluidized combustion of Newlands coal char particles. 52 refs., 60 figs.

  20. Including source uncertainty and prior information in the analysis of stable isotope mixing models.

    Science.gov (United States)

    Ward, Eric J; Semmens, Brice X; Schindler, Daniel E

    2010-06-15

    Stable isotope mixing models offer a statistical framework for estimating the contribution of multiple sources (such as prey) to a mixture distribution. Recent advances in these models have estimated the source proportions using Bayesian methods, but have not explicitly accounted for uncertainty in the mean and variance of sources. We demonstrate that treating these quantities as unknown parameters can reduce bias in the estimated source contributions, although model complexity is increased (thereby increasing the variance of estimates). The advantages of this fully Bayesian approach are particularly apparent when the source geometry is poor or sample sizes are small. A second benefit to treating source quantities as parameters is that prior source information can be included. We present findings from 9 lake food-webs, where the consumer of interest (fish) has a diet composed of 5 sources: aquatic insects, snails, zooplankton, amphipods, and terrestrial insects. We compared the traditional Bayesian stable isotope mixing model with fixed source parameters to our fully Bayesian model-with and without an informative prior. The informative prior has much less impact than the choice of model-the traditional mixing model with fixed source parameters estimates the diet to be dominated by aquatic insects, while the fully Bayesian model estimates the diet to be more balanced but with greater importance of zooplankton. The findings from this example demonstrate that there can be stark differences in inference between the two model approaches, particularly when the source geometry of the mixing model is poor. These analyses also emphasize the importance of investing substantial effort toward characterizing the variation in the isotopic characteristics of source pools to appropriately quantify uncertainties in their contributions to consumers in food webs.

  1. Kinetic modeling of rhamnolipid production by Pseudomonas aeruginosa PAO1 including cell density-dependent regulation.

    Science.gov (United States)

    Henkel, Marius; Schmidberger, Anke; Vogelbacher, Markus; Kühnert, Christian; Beuker, Janina; Bernard, Thomas; Schwartz, Thomas; Syldatk, Christoph; Hausmann, Rudolf

    2014-08-01

    The production of rhamnolipid biosurfactants by Pseudomonas aeruginosa is under complex control of a quorum sensing-dependent regulatory network. Due to a lack of understanding of the kinetics applicable to the process and relevant interrelations of variables, current processes for rhamnolipid production are based on heuristic approaches. To systematically establish a knowledge-based process for rhamnolipid production, a deeper understanding of the time-course and coupling of process variables is required. By combining reaction kinetics, stoichiometry, and experimental data, a process model for rhamnolipid production with P. aeruginosa PAO1 on sunflower oil was developed as a system of coupled ordinary differential equations (ODEs). In addition, cell density-based quorum sensing dynamics were included in the model. The model comprises a total of 36 parameters, 14 of which are yield coefficients and 7 of which are substrate affinity and inhibition constants. Of all 36 parameters, 30 were derived from dedicated experimental results, literature, and databases and 6 of them were used as fitting parameters. The model is able to describe data on biomass growth, substrates, and products obtained from a reference batch process and other validation scenarios. The model presented describes the time-course and interrelation of biomass, relevant substrates, and products on a process level while including a kinetic representation of cell density-dependent regulatory mechanisms.

  2. Codigestion of solid wastes: a review of its uses and perspectives including modeling.

    Science.gov (United States)

    Mata-Alvarez, Joan; Dosta, Joan; Macé, Sandra; Astals, Sergi

    2011-06-01

    The last two years have witnessed a dramatic increase in the number of papers published on the subject of codigestion, highlighting the relevance of this topic within anaerobic digestion research. Consequently, it seems appropriate to undertake a review of codigestion practices starting from the late 1970s, when the first papers related to this concept were published, and continuing to the present day, demonstrating the exponential growth in the interest shown in this approach in recent years. Following a general analysis of the situation, state-of-the-art codigestion is described, focusing on the two most important areas as regards publication: codigestion involving sewage sludge and the organic fraction of municipal solid waste (including a review of the secondary advantages for wastewater treatment plant related to biological nutrient removal), and codigestion in the agricultural sector, that is, including agricultural - farm wastes, and energy crops. Within these areas, a large number of oversized digesters appear which can be used to codigest other substrates, resulting in economic and environmental advantages. Although the situation may be changing, there is still a need for good examples on an industrial scale, particularly with regard to wastewater treatment plants, in order to extend this beneficial practice. In the last section, a detailed analysis of papers addressing the important aspect of modelisation is included. This analysis includes the first codigestion models to be developed as well as recent applications of the standardised anaerobic digestion model ADM1 to codigestion. (This review includes studies ranging from laboratory to industrial scale.).

  3. Enhanced UWB Radio Channel Model for Short-Range Communication Scenarios Including User Dynamics

    DEFF Research Database (Denmark)

    Kovacs, Istvan Zsolt; Nguyen, Tuan Hung; Eggers, Patrick Claus F.

    2005-01-01

    In this paper we propose a SISO UWB radio channel model for short-range radio link scenarios between a fixed device and a dynamic user hand-held device. The channel model is derived based on novel experimental UWB radio propagation investigations carried out in typical indoor PAN scenarios...... including realistic device and user terminal antenna configurations. The radio channel measurements have been performed in the lower UWB frequency band of 3GHz to 5GHz with a 2x4 MIMO antenna configuration. Several environments, user scenarios and two types of user terminals have been used. The developed...

  4. Fuzzy Control of Yaw and Roll Angles of a Simulated Helicopter Model Includes Articulated Manipulators

    Directory of Open Access Journals (Sweden)

    Hossein Sadegh Lafmejani

    2015-09-01

    Full Text Available Fuzzy logic controller (FLC is a heuristic method by If-Then Rules which resembles human intelligence and it is a good method for designing Non-linear control systems. In this paper, an arbitrary helicopter model includes articulated manipulators has been simulated with Matlab SimMechanics toolbox. Due to the difficulties of modeling this complex system, a fuzzy controller with simple fuzzy rules has been designed for its yaw and roll angles in order to stabilize the helicopter while it is in the presence of disturbances or its manipulators are moving for a task. Results reveal that a simple FLC can appropriately control this system.

  5. Including Finite Surface Span Effects in Empirical Jet-Surface Interaction Noise Models

    Science.gov (United States)

    Brown, Clifford A.

    2016-01-01

    The effect of finite span on the jet-surface interaction noise source and the jet mixing noise shielding and reflection effects is considered using recently acquired experimental data. First, the experimental setup and resulting data are presented with particular attention to the role of surface span on far-field noise. These effects are then included in existing empirical models that have previously assumed that all surfaces are semi-infinite. This extended abstract briefly describes the experimental setup and data leaving the empirical modeling aspects for the final paper.

  6. Analytical model for investigation of interior noise characteristics in aircraft with multiple propellers including synchrophasing

    Science.gov (United States)

    Fuller, C. R.

    1986-01-01

    A simplified analytical model of transmission of noise into the interior of propeller-driven aircraft has been developed. The analysis includes directivity and relative phase effects of the propeller noise sources, and leads to a closed form solution for the coupled motion between the interior and exterior fields via the shell (fuselage) vibrational response. Various situations commonly encountered in considering sound transmission into aircraft fuselages are investigated analytically and the results obtained are compared to measurements in real aircraft. In general the model has proved successful in identifying basic mechanisms behind noise transmission phenomena.

  7. S2DS: Physics-based compact model for circuit simulation of two-dimensional semiconductor devices including non-idealities

    Science.gov (United States)

    Suryavanshi, Saurabh V.; Pop, Eric

    2016-12-01

    We present a physics-based compact model for two-dimensional (2D) field-effect transistors (FETs) based on monolayer semiconductors such as MoS2. A semi-classical transport approach is appropriate for the 2D channel, enabling simplified analytical expressions for the drain current. In addition to intrinsic FET behavior, the model includes contact resistance, traps and impurities, quantum capacitance, fringing fields, high-field velocity saturation, and self-heating, the latter being found to play an important role. The model is calibrated with state-of-the-art experimental data for n- and p-type 2D-FETs, and it can be used to analyze device properties for sub-100 nm gate lengths. Using the experimental fit, we demonstrate the feasibility of circuit simulations using properly scaled devices. The complete model is implemented in SPICE-compatible Verilog-A, and a downloadable version is freely available at the nanoHUB.org.

  8. An air/sea flux model including the effects of capillary waves

    Science.gov (United States)

    Bourassa, Mark A.

    1993-01-01

    An improved model of the air/sea interface is developed. The improvements consist in including the effect of capillary (surface tension) waves on the tropical surface fluxes and the consideration of the sea state, both of which increase the magnitude of tropical surface fluxes. Changes in surface stress are most significant in the low wind-speed regions, which include the areas where westerly bursts occur. It is shown that the changes, from the regular wind conditions to those of a westerly burst or El-Nino, can double when the effects of capillary waves are considered. This implies a much stronger coupling between the ocean and the atmosphere than is predicted by other boundary layer models.

  9. A complete model of CH+ rotational excitation including radiative and chemical pumping processes

    CERN Document Server

    Godard, Benjamin

    2012-01-01

    Aims. Excitation of far-infrared and submillimetric molecular lines may originate from nonreactive collisions, chemical formation, or far infrared, near-infrared, and optical fluorescences. As a template, we investigate the impact of each of these processes on the excitation of the methylidyne cation CH+ and on the intensities of its rotational transitions recently detected in emission in dense photodissociation regions (PDRs) and in planetary nebulae. Methods. We have developed a nonlocal thermodynamic equilibrium (non-LTE) excitation model that includes the entire energy structure of CH+, i.e. taking into account the pumping of its vibrational and bound and unbound electronic states by near-infrared and optical photons. The model includes the theoretical cross-sections of nonreactive collisions with H, H2, He, and e-, and a Boltzmann distribution is used to describe the probability of populating the excited levels of CH+ during its chemical formation by hydrogenation of C+. To confirm our results we also pe...

  10. Including Flocculation in a Numerical Sediment Transport Model for a Partially-Mixed Estuary

    Science.gov (United States)

    Tarpley, D.; Harris, C. K.; Friedrichs, C. T.

    2016-12-01

    Particle settling velocity impacts the transport of suspended sediment to the first order but fine-grained material like muds tend to form loosely bound aggregates (flocs) whose settling velocity can vary widely. Properties of flocculated sediment such as settling velocity and particle density are difficult to predict because they change in response to several factors including salinity, suspended sediment concentration, turbulent mixing, and organic content. Knowledge of the mechanisms governing flocculation of cohesive sediment is rapidly expanding; especially in response to recent technical advances. As the understanding of particle dynamics progresses, numerical models describing flocculation and break-up are being developed with varying degrees of complexity. While complex models capture the dynamics of the system, their computational costs may prohibit their incorporation into larger model domains. It is important to determine if the computational costs of intricate floc models are justifiable compared to simpler formulations. For this study, we implement an idealized two-dimensional model designed to represent a longitudinal section of a partially mixed estuary that neglects across-channel variation but exhibits salinity driven estuarine circulation. The idealized domain is designed to mimic the primary features of the York River, VA. Suspended load, erosion and deposition are calculated within the sediment transport routines of the COAWST modeling system. We compare different methods for prescribing settling velocity of fine-grained material. The simplest, standard model neglects flocculation dynamics while the complex treatment is a size-class-based flocculation model (FLOCMOD). Differences in tidal and daily averages of suspended load, bulk settling velocity and bed deposition are compared between the standard and FLOCMOD runs, to examine the relative impact of flocculation on sediment transport patterns. We expect FLOCMOD to have greater variability and

  11. Multistate Statistical Modeling: A Tool to Build a Lung Cancer Microsimulation Model That Includes Parameter Uncertainty and Patient Heterogeneity.

    Science.gov (United States)

    Bongers, Mathilda L; de Ruysscher, Dirk; Oberije, Cary; Lambin, Philippe; Uyl-de Groot, Carin A; Coupé, V M H

    2016-01-01

    With the shift toward individualized treatment, cost-effectiveness models need to incorporate patient and tumor characteristics that may be relevant to treatment planning. In this study, we used multistate statistical modeling to inform a microsimulation model for cost-effectiveness analysis of individualized radiotherapy in lung cancer. The model tracks clinical events over time and takes patient and tumor features into account. Four clinical states were included in the model: alive without progression, local recurrence, metastasis, and death. Individual patients were simulated by repeatedly sampling a patient profile, consisting of patient and tumor characteristics. The transitioning of patients between the health states is governed by personalized time-dependent hazard rates, which were obtained from multistate statistical modeling (MSSM). The model simulations for both the individualized and conventional radiotherapy strategies demonstrated internal and external validity. Therefore, MSSM is a useful technique for obtaining the correlated individualized transition rates that are required for the quantification of a microsimulation model. Moreover, we have used the hazard ratios, their 95% confidence intervals, and their covariance to quantify the parameter uncertainty of the model in a correlated way. The obtained model will be used to evaluate the cost-effectiveness of individualized radiotherapy treatment planning, including the uncertainty of input parameters. We discuss the model-building process and the strengths and weaknesses of using MSSM in a microsimulation model for individualized radiotherapy in lung cancer.

  12. Model for safety reports including descriptive examples; Mall foer saekerhetsrapporter med beskrivande exempel

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1995-12-01

    Several safety reports will be produced in the process of planning and constructing the system for disposal of high-level radioactive waste in Sweden. The present report gives a model, with detailed examples, of how these reports should be organized and what steps they should include. In the near future safety reports will deal with the encapsulation plant and the repository. Later reports will treat operation of the handling systems and the repository.

  13. Extending the formal model of a spatial data infrastructure to include volunteered geographical information

    CSIR Research Space (South Africa)

    Cooper, Antony K

    2011-07-01

    Full Text Available an aggregator of VGI, such as Ushahidi, and the provider of the infrastructure for collecting VGI, such as OpenStreetMap. 3) Broker: A stakeholder who brings End Users and Providers together and assists in the negotiation of contracts between them... model of a spatial data infrastructure to include volunteered geographical information Antony K Cooper*, Petr Rapant?, Jan Hjelmager?, Dominique Laurent?, Adam Iwaniak#, Serena Coetzee$, Harold Moellering? and Ulrich D?ren? *Logistics...

  14. Phase diagrams of the corner cubic Heisenberg model and its site-diluted version on a triangular lattice: Renormalization-group treatment

    Science.gov (United States)

    Nagai, Kiyoshi

    1985-02-01

    The global phase diagrams of the corner cubic anisotropic discrete-spin Heisenberg (CH) model and its site-diluted version (dCH) on a triangular lattice are investigated through the position-space renormalization-group method of the simple Migdal-Kadanoff type. The two models include many simpler models as their subspaces, and the interrelations among these models are elucidated. The five-dimensional (5D) phase diagram of the dCH model is generated from the 3D one of the CH model by introducing 2D site-dilution operation. The structure of the 5D phase diagram and the effect of site dilution on the CH model are conveniently visualized by introducing the concept of paths in the 3D subspace. The path describes the temperature variation provided that the ratios between the interaction parameters in the original CH model are fixed. The resulting phase diagrams of the dCH model exhibit the typical three-phase coexistence of solid, liquid, and gas, and their qualitative interpretations are summarized.

  15. QCD Equation of State From a Chiral Hadronic Model Including Quark Degrees of Freedom

    CERN Document Server

    Rau, Philip; Schramm, Stefan; Stöcker, Horst

    2013-01-01

    This work presents an effective model for strongly interacting matter and the QCD equation of state (EoS). The model includes both hadron and quark degrees of freedom and takes into account the transition of chiral symmetry restoration as well as the deconfinement phase transition. At low temperatures $T$ and baryonic densities $\\rho_B$ a hadron resonance gas is described using a SU(3)-flavor sigma-omega model and a quark phase is introduced in analogy to PNJL models for higher $T$ and $\\rho_B$. In this way, the correct asymptotic degrees of freedom are used in a wide range of $T$ and $\\rho_B$. Here, results of this model concerning the chiral and deconfinement phase transitions and thermodynamic model properties are presented. Large hadron resonance multiplicities in the transition region emphasize the importance of heavy-mass resonance states in this region and their impact on the chiral transition behavior. The resulting phase diagram of QCD matter at small chemical potentials is in line with latest lattic...

  16. A full model for simulation of electrochemical cells including complex behavior

    Science.gov (United States)

    Esperilla, J. J.; Félez, J.; Romero, G.; Carretero, A.

    This communication presents a model of electrochemical cells developed in order to simulate their electrical, chemical and thermal behavior showing the differences when thermal effects are or not considered in the charge-discharge process. The work presented here has been applied to the particular case of the Pb,PbSO 4|H 2SO 4 (aq)|PbO 2,Pb cell, which forms the basis of the lead-acid batteries so widely used in the automotive industry and as traction batteries in electric or hybrid vehicles. Each half-cell is considered independently in the model. For each half-cell, in addition to the main electrode reaction, a secondary reaction is considered: the hydrogen evolution reaction in the negative electrode and the oxygen evolution reaction in the positive. The equilibrium potential is calculated with the Nernst equation, in which the activity coefficients are fitted to an exponential function using experimental data. On the other hand, the two main mechanisms that produce the overpotential are considered, that is the activation or charge transfer and the diffusion mechanisms. First, an isothermal model has been studied in order to show the behavior of the main phenomena. A more complex model has also been studied including thermal behavior. This model is very useful in the case of traction batteries in electric and hybrid vehicles where high current intensities appear. Some simulation results are also presented in order to show the accuracy of the proposed models.

  17. A High-Rate, Single-Crystal Model including Phase Transformations, Plastic Slip, and Twinning

    Energy Technology Data Exchange (ETDEWEB)

    Addessio, Francis L. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Bronkhorst, Curt Allan [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Bolme, Cynthia Anne [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Explosive Science and Shock Physics Division; Brown, Donald William [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Cerreta, Ellen Kathleen [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Lebensohn, Ricardo A. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Lookman, Turab [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Luscher, Darby Jon [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Mayeur, Jason Rhea [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Morrow, Benjamin M. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Rigg, Paulo A. [Washington State Univ., Pullman, WA (United States). Dept. of Physics. Inst. for Shock Physics

    2016-08-09

    An anisotropic, rate-­dependent, single-­crystal approach for modeling materials under the conditions of high strain rates and pressures is provided. The model includes the effects of large deformations, nonlinear elasticity, phase transformations, and plastic slip and twinning. It is envisioned that the model may be used to examine these coupled effects on the local deformation of materials that are subjected to ballistic impact or explosive loading. The model is formulated using a multiplicative decomposition of the deformation gradient. A plate impact experiment on a multi-­crystal sample of titanium was conducted. The particle velocities at the back surface of three crystal orientations relative to the direction of impact were measured. Molecular dynamics simulations were conducted to investigate the details of the high-­rate deformation and pursue issues related to the phase transformation for titanium. Simulations using the single crystal model were conducted and compared to the high-­rate experimental data for the impact loaded single crystals. The model was found to capture the features of the experiments.

  18. A new version of the CNRM Chemistry-Climate Model, CNRM-CCM: description and improvements from the CCMVal-2 simulations

    Directory of Open Access Journals (Sweden)

    M. Michou

    2011-10-01

    Full Text Available This paper presents a new version of the Météo-France CNRM Chemistry-Climate Model, so-called CNRM-CCM. It includes some fundamental changes from the previous version (CNRM-ACM which was extensively evaluated in the context of the CCMVal-2 validation activity. The most notable changes concern the radiative code of the GCM, and the inclusion of the detailed stratospheric chemistry of our Chemistry-Transport model MOCAGE on-line within the GCM. A 47-yr transient simulation (1960–2006 is the basis of our analysis. CNRM-CCM generates satisfactory dynamical and chemical fields in the stratosphere. Several shortcomings of CNRM-ACM simulations for CCMVal-2 that resulted from an erroneous representation of the impact of volcanic aerosols as well as from transport deficiencies have been eliminated.

    Remaining problems concern the upper stratosphere (5 to 1 hPa where temperatures are too high, and where there are biases in the NO2, N2O5 and O3 mixing ratios. In contrast, temperatures at the tropical tropopause are too cold. These issues are addressed through the implementation of a more accurate radiation scheme at short wavelengths. Despite these problems we show that this new CNRM CCM is a useful tool to study chemistry-climate applications.

  19. Technical report series on global modeling and data assimilation. Volume 4: Documentation of the Goddard Earth Observing System (GEOS) data assimilation system, version 1

    Science.gov (United States)

    Suarez, Max J. (Editor); Pfaendtner, James; Bloom, Stephen; Lamich, David; Seablom, Michael; Sienkiewicz, Meta; Stobie, James; Dasilva, Arlindo

    1995-01-01

    This report describes the analysis component of the Goddard Earth Observing System, Data Assimilation System, Version 1 (GEOS-1 DAS). The general features of the data assimilation system are outlined, followed by a thorough description of the statistical interpolation algorithm, including specification of error covariances and quality control of observations. We conclude with a discussion of the current status of development of the GEOS data assimilation system. The main components of GEOS-1 DAS are an atmospheric general circulation model and an Optimal Interpolation algorithm. The system is cycled using the Incremental Analysis Update (IAU) technique in which analysis increments are introduced as time independent forcing terms in a forecast model integration. The system is capable of producing dynamically balanced states without the explicit use of initialization, as well as a time-continuous representation of non- observables such as precipitation and radiational fluxes. This version of the data assimilation system was used in the five-year reanalysis project completed in April 1994 by Goddard's Data Assimilation Office (DAO) Data from this reanalysis are available from the Goddard Distributed Active Center (DAAC), which is part of NASA's Earth Observing System Data and Information System (EOSDIS). For information on how to obtain these data sets, contact the Goddard DAAC at (301) 286-3209, EMAIL daac@gsfc.nasa.gov.

  20. A 3D model of the oculomotor plant including the pulley system

    Energy Technology Data Exchange (ETDEWEB)

    Viegener, A; Armentano, R L [Fundacion Universitaria Dr. Rene G. Favaloro, SolIs 453 (1078) Buenos Aires (Argentina)

    2007-11-15

    Early models of the oculomotor plant only considered the eye globes and the muscles that move them. Recently, connective tissue structures have been found enveloping the extraocular muscles (EOMs) and firmly anchored to the orbital wall. These structures act as pulleys; they determine the functional origin of the EOMs and, in consequence, their effective pulling direction. A three dimensional model of the oculomotor plant, including pulleys, has been developed and simulations in Simulink were performed during saccadic eye movements. Listing's law was implemented based on the supposition that there exists an eye orientation related signal. The inclusion of the pulleys in the model makes this assumption plausible and simplifies the problem of the plant noncommutativity.

  1. A flexible and qualitatively stable model for cell cycle dynamics including DNA damage effects.

    Science.gov (United States)

    Jeffries, Clark D; Johnson, Charles R; Zhou, Tong; Simpson, Dennis A; Kaufmann, William K

    2012-01-01

    This paper includes a conceptual framework for cell cycle modeling into which the experimenter can map observed data and evaluate mechanisms of cell cycle control. The basic model exhibits qualitative stability, meaning that regardless of magnitudes of system parameters its instances are guaranteed to be stable in the sense that all feasible trajectories converge to a certain trajectory. Qualitative stability can also be described by the signs of real parts of eigenvalues of the system matrix. On the biological side, the resulting model can be tuned to approximate experimental data pertaining to human fibroblast cell lines treated with ionizing radiation, with or without disabled DNA damage checkpoints. Together these properties validate a fundamental, first order systems view of cell dynamics. Classification Codes: 15A68.

  2. Including policy and management in socio-hydrology models: initial conceptualizations

    Science.gov (United States)

    Hermans, Leon; Korbee, Dorien

    2017-04-01

    Socio-hydrology studies the interactions in coupled human-water systems. So far, the use of dynamic models that capture the direct feedback between societal and hydrological systems has been dominant. What has not yet been included with any particular emphasis, is the policy or management layer, which is a central element in for instance integrated water resources management (IWRM) or adaptive delta management (ADM). Studying the direct interactions between human-water systems generates knowledges that eventually helps influence these interactions in ways that may ensure better outcomes - for society and for the health and sustainability of water systems. This influence sometimes occurs through spontaneous emergence, uncoordinated by societal agents - private sector, citizens, consumers, water users. However, the term 'management' in IWRM and ADM also implies an additional coordinated attempt through various public actors. This contribution is a call to include the policy and management dimension more prominently into the research focus of the socio-hydrology field, and offers first conceptual variables that should be considered in attempts to include this policy or management layer in socio-hydrology models. This is done by drawing on existing frameworks to study policy processes throughout both planning and implementation phases. These include frameworks such as the advocacy coalition framework, collective learning and policy arrangements, which all emphasis longer-term dynamics and feedbacks between actor coalitions in strategic planning and implementation processes. A case about longter-term dynamics in the management of the Haringvliet in the Netherlands is used to illustrate the paper.

  3. EXACT SOLUTIONS FOR NONLINEAR TRANSIENT FLOW MODEL INCLUDING A QUADRATIC GRADIENT TERM

    Institute of Scientific and Technical Information of China (English)

    曹绪龙; 同登科; 王瑞和

    2004-01-01

    The models of the nonlinear radial flow for the infinite and finite reservoirs including a quadratic gradient term were presented. The exact solution was given in real space for flow equation including quadratic gradiet term for both constant-rate and constant pressure production cases in an infinite system by using generalized Weber transform. Analytical solutions for flow equation including quadratic gradient term were also obtained by using the Hankel transform for a finite circular reservoir case. Both closed and constant pressure outer boundary conditions are considered. Moreover, both constant rate and constant pressure inner boundary conditions are considered. The difference between the nonlinear pressure solution and linear pressure solution is analyzed. The difference may be reached about 8% in the long time. The effect of the quadratic gradient term in the large time well test is considered.

  4. Evaluation of NorESM-OC (versions 1 and 1.2), the ocean carbon-cycle stand-alone configuration of the Norwegian Earth System Model (NorESM1)

    Science.gov (United States)

    Schwinger, Jörg; Goris, Nadine; Tjiputra, Jerry F.; Kriest, Iris; Bentsen, Mats; Bethke, Ingo; Ilicak, Mehmet; Assmann, Karen M.; Heinze, Christoph

    2016-08-01

    Idealised and hindcast simulations performed with the stand-alone ocean carbon-cycle configuration of the Norwegian Earth System Model (NorESM-OC) are described and evaluated. We present simulation results of three different model configurations (two different model versions at different grid resolutions) using two different atmospheric forcing data sets. Model version NorESM-OC1 corresponds to the version that is included in the NorESM-ME1 fully coupled model, which participated in CMIP5. The main update between NorESM-OC1 and NorESM-OC1.2 is the addition of two new options for the treatment of sinking particles. We find that using a constant sinking speed, which has been the standard in NorESM's ocean carbon cycle module HAMOCC (HAMburg Ocean Carbon Cycle model), does not transport enough particulate organic carbon (POC) into the deep ocean below approximately 2000 m depth. The two newly implemented parameterisations, a particle aggregation scheme with prognostic sinking speed, and a simpler scheme that uses a linear increase in the sinking speed with depth, provide better agreement with observed POC fluxes. Additionally, reduced deep ocean biases of oxygen and remineralised phosphate indicate a better performance of the new parameterisations. For model version 1.2, a re-tuning of the ecosystem parameterisation has been performed, which (i) reduces previously too high primary production at high latitudes, (ii) consequently improves model results for surface nutrients, and (iii) reduces alkalinity and dissolved inorganic carbon biases at low latitudes. We use hindcast simulations with prescribed observed and constant (pre-industrial) atmospheric CO2 concentrations to derive the past and contemporary ocean carbon sink. For the period 1990-1999 we find an average ocean carbon uptake ranging from 2.01 to 2.58 Pg C yr-1 depending on model version, grid resolution, and atmospheric forcing data set.

  5. Representing icebergs in the iLOVECLIM model (version 1.0 – a sensitivity study

    Directory of Open Access Journals (Sweden)

    M. Bügelmayer

    2014-07-01

    Full Text Available Recent modelling studies have indicated that icebergs alter the ocean's state, the thickness of sea ice and the prevailing atmospheric conditions, in short play an active role in the climate system. The icebergs' impact is due to their slowly released melt water which freshens and cools the ocean. The spatial distribution of the icebergs and thus their melt water depends on the forces (atmospheric and oceanic acting on them as well as on the icebergs' size. The studies conducted so far have in common that the icebergs were moved by reconstructed or modelled forcing fields and that the initial size distribution of the icebergs was prescribed according to present day observations. To address these shortcomings, we used the climate model iLOVECLIM that includes actively coupled ice-sheet and iceberg modules, to conduct 15 sensitivity experiments to analyse (1 the impact of the forcing fields (atmospheric vs. oceanic on the icebergs' distribution and melt flux, and (2 the effect of the used initial iceberg size on the resulting Northern Hemisphere climate and ice sheet under different climate conditions (pre-industrial, strong/weak radiative forcing. Our results show that, under equilibrated pre-industrial conditions, the oceanic currents cause the bergs to stay close to the Greenland and North American coast, whereas the atmospheric forcing quickly distributes them further away from their calving site. These different characteristics strongly affect the lifetime of icebergs, since the wind-driven icebergs melt up to two years faster as they are quickly distributed into the relatively warm North Atlantic waters. Moreover, we find that local variations in the spatial distribution due to different iceberg sizes do not result in different climate states and Greenland ice sheet volume, independent of the prevailing climate conditions (pre-industrial, warming or cooling climate. Therefore, we conclude that local differences in the distribution of their

  6. Process Definition and Process Modeling Methods Version 01.01.00

    Science.gov (United States)

    1991-09-01

    process model. This generic process model is a state machine model . It permits progress in software development to be characterized as transitions...e.g., Entry-Task-Validation-Exit (ETVX) diagram, Petri Net, two-level state machine model , state machine, and Structured Analysis and Design

  7. Hybrid2: The hybrid system simulation model, Version 1.0, user manual

    Energy Technology Data Exchange (ETDEWEB)

    Baring-Gould, E.I.

    1996-06-01

    In light of the large scale desire for energy in remote communities, especially in the developing world, the need for a detailed long term performance prediction model for hybrid power systems was seen. To meet these ends, engineers from the National Renewable Energy Laboratory (NREL) and the University of Massachusetts (UMass) have spent the last three years developing the Hybrid2 software. The Hybrid2 code provides a means to conduct long term, detailed simulations of the performance of a large array of hybrid power systems. This work acts as an introduction and users manual to the Hybrid2 software. The manual describes the Hybrid2 code, what is included with the software and instructs the user on the structure of the code. The manual also describes some of the major features of the Hybrid2 code as well as how to create projects and run hybrid system simulations. The Hybrid2 code test program is also discussed. Although every attempt has been made to make the Hybrid2 code easy to understand and use, this manual will allow many organizations to consider the long term advantages of using hybrid power systems instead of conventional petroleum based systems for remote power generation.

  8. DISPLAY-2: a two-dimensional shallow layer model for dense gas dispersion including complex features.

    Science.gov (United States)

    Venetsanos, A G; Bartzis, J G; Würtz, J; Papailiou, D D

    2003-04-25

    A two-dimensional shallow layer model has been developed to predict dense gas dispersion, under realistic conditions, including complex features such as two-phase releases, obstacles and inclined ground. The model attempts to predict the time and space evolution of the cloud formed after a release of a two-phase pollutant into the atmosphere. The air-pollutant mixture is assumed ideal. The cloud evolution is described mathematically through the Cartesian, two-dimensional, shallow layer conservation equations for mixture mass, mixture momentum in two horizontal directions, total pollutant mass fraction (vapor and liquid) and mixture internal energy. Liquid mass fraction is obtained assuming phase equilibrium. Account is taken in the conservation equations for liquid slip and eventual liquid rainout through the ground. Entrainment of ambient air is modeled via an entrainment velocity model, which takes into account the effects of ground friction, ground heat transfer and relative motion between cloud and surrounding atmosphere. The model additionally accounts for thin obstacles effects in three ways. First a stepwise description of the obstacle is generated, following the grid cell faces, taking into account the corresponding area blockage. Then obstacle drag on the passing cloud is modeled by adding flow resistance terms in the momentum equations. Finally the effect of extra vorticity generation and entrainment enhancement behind obstacles is modeled by adding locally into the entrainment formula without obstacles, a characteristic velocity scale defined from the obstacle pressure drop and the local cloud height.The present model predictions have been compared against theoretical results for constant volume and constant flux gravity currents. It was found that deviations of the predicted cloud footprint area change with time from the theoretical were acceptably small, if one models the frictional forces between cloud and ambient air, neglecting the Richardson

  9. Sensitivity of an atmospheric photochemistry model to chlorine perturbations including consideration of uncertainty propagation

    Science.gov (United States)

    Stolarski, R. S.; Douglass, A. R.

    1986-01-01

    Models of stratospheric photochemistry are generally tested by comparing their predictions for the composition of the present atmosphere with measurements of species concentrations. These models are then used to make predictions of the atmospheric sensitivity to perturbations. Here the problem of the sensitivity of such a model to chlorine perturbations ranging from the present influx of chlorine-containing compounds to several times that influx is addressed. The effects of uncertainties in input parameters, including reaction rate coefficients, cross sections, solar fluxes, and boundary conditions, are evaluated using a Monte Carlo method in which the values of the input parameters are randomly selected. The results are probability distributions for present atmosheric concentrations and for calculated perturbations due to chlorine from fluorocarbons. For more than 300 Monte Carlo runs the calculated ozone perturbation for continued emission of fluorocarbons at today's rates had a mean value of -6.2 percent, with a 1-sigma width of 5.5 percent. Using the same runs but only allowing the cases in which the calculated present atmosphere values of NO, NO2, and ClO at 25 km altitude fell within the range of measurements yielded a mean ozone depletion of -3 percent, with a 1-sigma deviation of 2.2 percent. The model showed a nonlinear behavior as a function of added fluorocarbons. The mean of the Monte Carlo runs was less nonlinear than the model run using mean value of the input parameters.

  10. Health Promotion Behavior of Chinese International Students in Korea Including Acculturation Factors: A Structural Equation Model.

    Science.gov (United States)

    Kim, Sun Jung; Yoo, Il Young

    2016-03-01

    The purpose of this study was to explain the health promotion behavior of Chinese international students in Korea using a structural equation model including acculturation factors. A survey using self-administered questionnaires was employed. Data were collected from 272 Chinese students who have resided in Korea for longer than 6 months. The data were analyzed using structural equation modeling. The p value of final model is .31. The fitness parameters of the final model such as goodness of fit index, adjusted goodness of fit index, normed fit index, non-normed fit index, and comparative fit index were more than .95. Root mean square of residual and root mean square error of approximation also met the criteria. Self-esteem, perceived health status, acculturative stress and acculturation level had direct effects on health promotion behavior of the participants and the model explained 30.0% of variance. The Chinese students in Korea with higher self-esteem, perceived health status, acculturation level, and lower acculturative stress reported higher health promotion behavior. The findings can be applied to develop health promotion strategies for this population. Copyright © 2016. Published by Elsevier B.V.

  11. S5-4: Formal Modeling of Affordance in Human-Included Systems

    Directory of Open Access Journals (Sweden)

    Namhun Kim

    2012-10-01

    Full Text Available In spite of it being necessary for humans to consider modeling, analysis, and control of human-included systems, it has been considered a challenging problem because of the critical role of humans in complex systems and of humans' capability of executing unanticipated actions–both beneficial and detrimental ones. Thus, to provide systematic approaches to modeling human actions as a part of system behaviors, a formal modeling framework for human-involved systems in which humans play a controlling role based on their perceptual information is presented. The theory of affordance provides definitions of human actions and their associated properties; Finite State Automata (FSA based modeling is capable of mapping nondeterministic humans into computable components in the system representation. In this talk, we investigate the role of perception in human actions in the system operation and examine the representation of perceptual elements in affordance-based modeling formalism. The proposed framework is expected to capture the natural ways in which humans participate in the system as part of its operation. A human-machine cooperative manufacturing system control example and a human agent simulation example will be introduced for the illustrative purposes at the end of the presentation.

  12. Assimilation of MODIS Snow Cover Through the Data Assimilation Research Testbed and the Community Land Model Version 4

    Science.gov (United States)

    Zhang, Yong-Fei; Hoar, Tim J.; Yang, Zong-Liang; Anderson, Jeffrey L.; Toure, Ally M.; Rodell, Matthew

    2014-01-01

    To improve snowpack estimates in Community Land Model version 4 (CLM4), the Moderate Resolution Imaging Spectroradiometer (MODIS) snow cover fraction (SCF) was assimilated into the Community Land Model version 4 (CLM4) via the Data Assimilation Research Testbed (DART). The interface between CLM4 and DART is a flexible, extensible approach to land surface data assimilation. This data assimilation system has a large ensemble (80-member) atmospheric forcing that facilitates ensemble-based land data assimilation. We use 40 randomly chosen forcing members to drive 40 CLM members as a compromise between computational cost and the data assimilation performance. The localization distance, a parameter in DART, was tuned to optimize the data assimilation performance at the global scale. Snow water equivalent (SWE) and snow depth are adjusted via the ensemble adjustment Kalman filter, particularly in regions with large SCF variability. The root-mean-square error of the forecast SCF against MODIS SCF is largely reduced. In DJF (December-January-February), the discrepancy between MODIS and CLM4 is broadly ameliorated in the lower-middle latitudes (2345N). Only minimal modifications are made in the higher-middle (4566N) and high latitudes, part of which is due to the agreement between model and observation when snow cover is nearly 100. In some regions it also reveals that CLM4-modeled snow cover lacks heterogeneous features compared to MODIS. In MAM (March-April-May), adjustments to snowmove poleward mainly due to the northward movement of the snowline (i.e., where largest SCF uncertainty is and SCF assimilation has the greatest impact). The effectiveness of data assimilation also varies with vegetation types, with mixed performance over forest regions and consistently good performance over grass, which can partly be explained by the linearity of the relationship between SCF and SWE in the model ensembles. The updated snow depth was compared to the Canadian Meteorological

  13. A post-new horizons global climate model of Pluto including the N2, CH4 and CO cycles

    Science.gov (United States)

    Forget, F.; Bertrand, T.; Vangvichith, M.; Leconte, J.; Millour, E.; Lellouch, E.

    2017-05-01

    We have built a new 3D Global Climate Model (GCM) to simulate Pluto as observed by New Horizons in 2015. All key processes are parametrized on the basis of theoretical equations, including atmospheric dynamics and transport, turbulence, radiative transfer, molecular conduction, as well as phases changes for N2, CH2 and CO. Pluto's climate and ice cycles are found to be very sensitive to model parameters and initial states. Nevertheless, a reference simulation is designed by running a fast, reduced version of the GCM with simplified atmospheric transport for 40,000 Earth years to initialize the surface ice distribution and sub-surface temperatures, from which a 28-Earth-year full GCM simulation is performed. Assuming a topographic depression in a Sputnik-planum (SP)-like crater on the anti-Charon hemisphere, a realistic Pluto is obtained, with most N2 and CO ices accumulated in the crater, methane frost covering both hemispheres except for the equatorial regions, and a surface pressure near 1.1 Pa in 2015 with an increase between 1988 and 2015, as reported from stellar occultations. Temperature profiles are in qualitative agreement with the observations. In particular, a cold atmospheric layer is obtained in the lowest kilometers above Sputnik Planum, as observed by New Horizons's REX experiment. It is shown to result from the combined effect of the topographic depression and N2 daytime sublimation. In the reference simulation with surface N2 ice exclusively present in Sputnik Planum, the global circulation is only forced by radiative heating gradients and remains relatively weak. Surface winds are locally induced by topography slopes and by N2 condensation and sublimation around Sputnik Planum. However, the circulation can be more intense depending on the exact distribution of surface N2 frost. This is illustrated in an alternative simulation with N2 condensing in the South Polar regions and N2 frost covering latitudes between 35°N and 48°N. A global condensation

  14. An extended gene protein/products Boolean network model including post-transcriptional regulation.

    Science.gov (United States)

    Benso, Alfredo; Di Carlo, Stefano; Politano, Gianfranco; Savino, Alessandro; Vasciaveo, Alessandro

    2014-05-07

    Networks Biology allows the study of complex interactions between biological systems using formal, well structured, and computationally friendly models. Several different network models can be created, depending on the type of interactions that need to be investigated. Gene Regulatory Networks (GRN) are an effective model commonly used to study the complex regulatory mechanisms of a cell. Unfortunately, given their intrinsic complexity and non discrete nature, the computational study of realistic-sized complex GRNs requires some abstractions. Boolean Networks (BNs), for example, are a reliable model that can be used to represent networks where the possible state of a node is a boolean value (0 or 1). Despite this strong simplification, BNs have been used to study both structural and dynamic properties of real as well as randomly generated GRNs. In this paper we show how it is possible to include the post-transcriptional regulation mechanism (a key process mediated by small non-coding RNA molecules like the miRNAs) into the BN model of a GRN. The enhanced BN model is implemented in a software toolkit (EBNT) that allows to analyze boolean GRNs from both a structural and a dynamic point of view. The open-source toolkit is compatible with available visualization tools like Cytoscape and allows to run detailed analysis of the network topology as well as of its attractors, trajectories, and state-space. In the paper, a small GRN built around the mTOR gene is used to demonstrate the main capabilities of the toolkit. The extended model proposed in this paper opens new opportunities in the study of gene regulation. Several of the successful researches done with the support of BN to understand high-level characteristics of regulatory networks, can now be improved to better understand the role of post-transcriptional regulation for example as a network-wide noise-reduction or stabilization mechanisms.

  15. An extended gene protein/products boolean network model including post-transcriptional regulation

    Science.gov (United States)

    2014-01-01

    Background Networks Biology allows the study of complex interactions between biological systems using formal, well structured, and computationally friendly models. Several different network models can be created, depending on the type of interactions that need to be investigated. Gene Regulatory Networks (GRN) are an effective model commonly used to study the complex regulatory mechanisms of a cell. Unfortunately, given their intrinsic complexity and non discrete nature, the computational study of realistic-sized complex GRNs requires some abstractions. Boolean Networks (BNs), for example, are a reliable model that can be used to represent networks where the possible state of a node is a boolean value (0 or 1). Despite this strong simplification, BNs have been used to study both structural and dynamic properties of real as well as randomly generated GRNs. Results In this paper we show how it is possible to include the post-transcriptional regulation mechanism (a key process mediated by small non-coding RNA molecules like the miRNAs) into the BN model of a GRN. The enhanced BN model is implemented in a software toolkit (EBNT) that allows to analyze boolean GRNs from both a structural and a dynamic point of view. The open-source toolkit is compatible with available visualization tools like Cytoscape and allows to run detailed analysis of the network topology as well as of its attractors, trajectories, and state-space. In the paper, a small GRN built around the mTOR gene is used to demonstrate the main capabilities of the toolkit. Conclusions The extended model proposed in this paper opens new opportunities in the study of gene regulation. Several of the successful researches done with the support of BN to understand high-level characteristics of regulatory networks, can now be improved to better understand the role of post-transcriptional regulation for example as a network-wide noise-reduction or stabilization mechanisms. PMID:25080304

  16. Accounting for observation uncertainties in an evaluation metric of low latitude turbulent air-sea fluxes: application to the comparison of a suite of IPSL model versions

    Science.gov (United States)

    Servonnat, Jérôme; Găinuşă-Bogdan, Alina; Braconnot, Pascale

    2017-09-01

    Turbulent momentum and heat (sensible heat and latent heat) fluxes at the air-sea interface are key components of the whole energetic of the Earth's climate. The evaluation of these fluxes in the climate models is still difficult because of the large uncertainties associated with the reference products. In this paper we present an objective metric accounting for reference uncertainties to evaluate the annual cycle of the low latitude turbulent fluxes of a suite of IPSL climate models. This metric consists in a Hotelling T 2 test between the simulated and observed field in a reduce space characterized by the dominant modes of variability that are common to both the model and the reference, taking into account the observational uncertainty. The test is thus more severe when uncertainties are small as it is the case for sea surface temperature (SST). The results of the test show that for almost all variables and all model versions the model-reference differences are not zero. It is not possible to distinguish between model versions for sensible heat and meridional wind stress, certainly due to the large observational uncertainties. All model versions share similar biases for the different variables. There is no improvement between the reference versions of the IPSL model used for CMIP3 and CMIP5. The test also reveals that the higher horizontal resolution fails to improve the representation of the turbulent surface fluxes compared to the other versions. The representation of the fluxes is further degraded in a version with improved atmospheric physics with an amplification of some of the biases in the Indian Ocean and in the intertropical convergence zone. The ranking of the model versions for the turbulent fluxes is not correlated with the ranking found for SST. This highlights that despite the fact that SST gradients are important for the large-scale atmospheric circulation patterns, other factors such as wind speed, and air-sea temperature contrast play an

  17. Accounting for observation uncertainties in an evaluation metric of low latitude turbulent air-sea fluxes: application to the comparison of a suite of IPSL model versions

    Science.gov (United States)

    Servonnat, Jérôme; Găinuşă-Bogdan, Alina; Braconnot, Pascale

    2016-11-01

    Turbulent momentum and heat (sensible heat and latent heat) fluxes at the air-sea interface are key components of the whole energetic of the Earth's climate. The evaluation of these fluxes in the climate models is still difficult because of the large uncertainties associated with the reference products. In this paper we present an objective metric accounting for reference uncertainties to evaluate the annual cycle of the low latitude turbulent fluxes of a suite of IPSL climate models. This metric consists in a Hotelling T 2 test between the simulated and observed field in a reduce space characterized by the dominant modes of variability that are common to both the model and the reference, taking into account the observational uncertainty. The test is thus more severe when uncertainties are small as it is the case for sea surface temperature (SST). The results of the test show that for almost all variables and all model versions the model-reference differences are not zero. It is not possible to distinguish between model versions for sensible heat and meridional wind stress, certainly due to the large observational uncertainties. All model versions share similar biases for the different variables. There is no improvement between the reference versions of the IPSL model used for CMIP3 and CMIP5. The test also reveals that the higher horizontal resolution fails to improve the representation of the turbulent surface fluxes compared to the other versions. The representation of the fluxes is further degraded in a version with improved atmospheric physics with an amplification of some of the biases in the Indian Ocean and in the intertropical convergence zone. The ranking of the model versions for the turbulent fluxes is not correlated with the ranking found for SST. This highlights that despite the fact that SST gradients are important for the large-scale atmospheric circulation patterns, other factors such as wind speed, and air-sea temperature contrast play an

  18. Assessment of two versions of regional climate model in simulating the Indian Summer Monsoon over South Asia CORDEX domain

    Science.gov (United States)

    Pattnayak, K. C.; Panda, S. K.; Saraswat, Vaishali; Dash, S. K.

    2017-07-01

    This study assess the performance of two versions of Regional Climate Model (RegCM) in simulating the Indian summer monsoon over South Asia for the period 1998 to 2003 with an aim of conducting future climate change simulations. Two sets of experiments were carried out with two different versions of RegCM (viz. RegCM4.2 and RegCM4.3) with the lateral boundary forcings provided from European Center for Medium Range Weather Forecast Reanalysis (ERA-interim) at 50 km horizontal resolution. The major updates in RegCM4.3 in comparison to the older version RegCM4.2 are the inclusion of measured solar irradiance in place of hardcoded solar constant and additional layers in the stratosphere. The analysis shows that the Indian summer monsoon rainfall, moisture flux and surface net downward shortwave flux are better represented in RegCM4.3 than that in the RegCM4.2 simulations. Excessive moisture flux in the RegCM4.2 simulation over the northern Arabian Sea and Peninsular India resulted in an overestimation of rainfall over the Western Ghats, Peninsular region as a result of which the all India rainfall has been overestimated. RegCM4.3 has performed well over India as a whole as well as its four rainfall homogenous zones in reproducing the mean monsoon rainfall and inter-annual variation of rainfall. Further, the monsoon onset, low-level Somali Jet and the upper level tropical easterly jet are better represented in the RegCM4.3 than RegCM4.2. Thus, RegCM4.3 has performed better in simulating the mean summer monsoon circulation over the South Asia. Hence, RegCM4.3 may be used to study the future climate change over the South Asia.

  19. Development of a user-friendly interface version of the Salmonella source-attribution model

    DEFF Research Database (Denmark)

    Hald, Tine; Lund, Jan

    of questions, where the use of a classical quantitative risk assessment model (i.e. transmission models) would be impaired due to a lack of data and time limitations. As these models require specialist knowledge, it was requested by EFSA to develop a flexible user-friendly source attribution model for use...... with a user-manual, which is also part of this report. Users of the interface are recommended to read this report before starting using the interface to become familiar with the model principles and the mathematics behind, which is required in order to interpret the model results and assess the validity...

  20. Department of Defense Data Model, Version 1, Fy 1998, Volume 8.

    Science.gov (United States)

    2007-11-02

    15 C g ’■s c 3 oo O) CO IO CM CO O) CO a. Appendix A IDEFl-x Modeling Conventions APPENDIX A: IDEFIX MODELING CONVENTIONS...1.0 IDEFIX DATA MODELING CONVENTIONS Whenever data structures and business rules required to support a functional area need to be specified, it is...etc.). An entity must have an attribute or A-l APPENDIX A: IDEFIX MODELING CONVENTIONS combination of attributes whose values uniquely identify

  1. General hypothesis and shell model for the synthesis of semiconductor nanotubes, including carbon nanotubes

    Science.gov (United States)

    Mohammad, S. Noor

    2010-09-01

    Semiconductor nanotubes, including carbon nanotubes, have vast potential for new technology development. The fundamental physics and growth kinetics of these nanotubes are still obscured. Various models developed to elucidate the growth suffer from limited applicability. An in-depth investigation of the fundamentals of nanotube growth has, therefore, been carried out. For this investigation, various features of nanotube growth, and the role of the foreign element catalytic agent (FECA) in this growth, have been considered. Observed growth anomalies have been analyzed. Based on this analysis, a new shell model and a general hypothesis have been proposed for the growth. The essential element of the shell model is the seed generated from segregation during growth. The seed structure has been defined, and the formation of droplet from this seed has been described. A modified definition of the droplet exhibiting adhesive properties has also been presented. Various characteristics of the droplet, required for alignment and organization of atoms into tubular forms, have been discussed. Employing the shell model, plausible scenarios for the formation of carbon nanotubes, and the variation in the characteristics of these carbon nanotubes have been articulated. The experimental evidences, for example, for the formation of shell around a core, dipole characteristics of the seed, and the existence of nanopores in the seed, have been presented. They appear to justify the validity of the proposed model. The diversities of nanotube characteristics, fundamentals underlying the creation of bamboo-shaped carbon nanotubes, and the impurity generation on the surface of carbon nanotubes have been elucidated. The catalytic action of FECA on growth has been quantified. The applicability of the proposed model to the nanotube growth by a variety of mechanisms has been elaborated. These mechanisms include the vapor-liquid-solid mechanism, the oxide-assisted growth mechanism, the self

  2. Technical description of the RIVM/KNMI PUFF dispersion model. Version 4.0

    NARCIS (Netherlands)

    van Pul WAJ

    1992-01-01

    This report provides a technical description of the RIVM/KNMI PUFF model. The model may be used to calculate, given wind and rain field data, the dispersion of components emitted following an accident, emergency or calamity; the model area may be freely chosen to match the area of concern. The re

  3. Analysis of electronic models for solar cells including energy resolved defect densities

    Energy Technology Data Exchange (ETDEWEB)

    Glitzky, Annegret

    2010-07-01

    We introduce an electronic model for solar cells including energy resolved defect densities. The resulting drift-diffusion model corresponds to a generalized van Roosbroeck system with additional source terms coupled with ODEs containing space and energy as parameters for all defect densities. The system has to be considered in heterostructures and with mixed boundary conditions from device simulation. We give a weak formulation of the problem. If the boundary data and the sources are compatible with thermodynamic equilibrium the free energy along solutions decays monotonously. In other cases it may be increasing, but we estimate its growth. We establish boundedness and uniqueness results and prove the existence of a weak solution. This is done by considering a regularized problem, showing its solvability and the boundedness of its solutions independent of the regularization level. (orig.)

  4. Nonlinear Acoustics FDTD method including Frequency Power Law Attenuation for Soft Tissue Modeling

    CERN Document Server

    Jiménez, Noé; Sánchez-Morcillo, Víctor; Camarena, Francisco; Hou, Yi; Konofagou, Elisa E

    2014-01-01

    This paper describes a model for nonlinear acoustic wave propagation through absorbing and weakly dispersive media, and its numerical solution by means of finite differences in time domain method (FDTD). The attenuation is based on multiple relaxation processes, and provides frequency dependent absorption and dispersion without using computational expensive convolutional operators. In this way, by using an optimization algorithm the coefficients for the relaxation processes can be obtained in order to fit a frequency power law that agrees the experimentally measured attenuation data for heterogeneous media over the typical frequency range for ultrasound medical applications. Our results show that two relaxation processes are enough to fit attenuation data for most soft tissues in this frequency range including the fundamental and the first ten harmonics. Furthermore, this model can fit experimental attenuation data that do not follow exactly a frequency power law over the frequency range of interest. The main...

  5. Particle-based modeling of heterogeneous chemical kinetics including mass transfer

    Science.gov (United States)

    Sengar, A.; Kuipers, J. A. M.; van Santen, Rutger A.; Padding, J. T.

    2017-08-01

    Connecting the macroscopic world of continuous fields to the microscopic world of discrete molecular events is important for understanding several phenomena occurring at physical boundaries of systems. An important example is heterogeneous catalysis, where reactions take place at active surfaces, but the effective reaction rates are determined by transport limitations in the bulk fluid and reaction limitations on the catalyst surface. In this work we study the macro-micro connection in a model heterogeneous catalytic reactor by means of stochastic rotation dynamics. The model is able to resolve the convective and diffusive interplay between participating species, while including adsorption, desorption, and reaction processes on the catalytic surface. Here we apply the simulation methodology to a simple straight microchannel with a catalytic strip. Dimensionless Damkohler numbers are used to comment on the spatial concentration profiles of reactants and products near the catalyst strip and in the bulk. We end the discussion with an outlook on more complicated geometries and increasingly complex reactions.

  6. Models of epidemics: when contact repetition and clustering should be included

    Directory of Open Access Journals (Sweden)

    Scholz Roland W

    2009-06-01

    Full Text Available Abstract Background The spread of infectious disease is determined by biological factors, e.g. the duration of the infectious period, and social factors, e.g. the arrangement of potentially contagious contacts. Repetitiveness and clustering of contacts are known to be relevant factors influencing the transmission of droplet or contact transmitted diseases. However, we do not yet completely know under what conditions repetitiveness and clustering should be included for realistically modelling disease spread. Methods We compare two different types of individual-based models: One assumes random mixing without repetition of contacts, whereas the other assumes that the same contacts repeat day-by-day. The latter exists in two variants, with and without clustering. We systematically test and compare how the total size of an outbreak differs between these model types depending on the key parameters transmission probability, number of contacts per day, duration of the infectious period, different levels of clustering and varying proportions of repetitive contacts. Results The simulation runs under different parameter constellations provide the following results: The difference between both model types is highest for low numbers of contacts per day and low transmission probabilities. The number of contacts and the transmission probability have a higher influence on this difference than the duration of the infectious period. Even when only minor parts of the daily contacts are repetitive and clustered can there be relevant differences compared to a purely random mixing model. Conclusion We show that random mixing models provide acceptable estimates of the total outbreak size if the number of contacts per day is high or if the per-contact transmission probability is high, as seen in typical childhood diseases such as measles. In the case of very short infectious periods, for instance, as in Norovirus, models assuming repeating contacts will also behave

  7. Standardized Competencies for Parenteral Nutrition Order Review and Parenteral Nutrition Preparation, Including Compounding: The ASPEN Model.

    Science.gov (United States)

    Boullata, Joseph I; Holcombe, Beverly; Sacks, Gordon; Gervasio, Jane; Adams, Stephen C; Christensen, Michael; Durfee, Sharon; Ayers, Phil; Marshall, Neil; Guenter, Peggi

    2016-08-01

    Parenteral nutrition (PN) is a high-alert medication with a complex drug use process. Key steps in the process include the review of each PN prescription followed by the preparation of the formulation. The preparation step includes compounding the PN or activating a standardized commercially available PN product. The verification and review, as well as preparation of this complex therapy, require competency that may be determined by using a standardized process for pharmacists and for pharmacy technicians involved with PN. An American Society for Parenteral and Enteral Nutrition (ASPEN) standardized model for PN order review and PN preparation competencies is proposed based on a competency framework, the ASPEN-published interdisciplinary core competencies, safe practice recommendations, and clinical guidelines, and is intended for institutions and agencies to use with their staff.

  8. A generalized model for optimal transport of images including dissipation and density modulation

    KAUST Repository

    Maas, Jan

    2015-11-01

    © EDP Sciences, SMAI 2015. In this paper the optimal transport and the metamorphosis perspectives are combined. For a pair of given input images geodesic paths in the space of images are defined as minimizers of a resulting path energy. To this end, the underlying Riemannian metric measures the rate of transport cost and the rate of viscous dissipation. Furthermore, the model is capable to deal with strongly varying image contrast and explicitly allows for sources and sinks in the transport equations which are incorporated in the metric related to the metamorphosis approach by Trouvé and Younes. In the non-viscous case with source term existence of geodesic paths is proven in the space of measures. The proposed model is explored on the range from merely optimal transport to strongly dissipative dynamics. For this model a robust and effective variational time discretization of geodesic paths is proposed. This requires to minimize a discrete path energy consisting of a sum of consecutive image matching functionals. These functionals are defined on corresponding pairs of intensity functions and on associated pairwise matching deformations. Existence of time discrete geodesics is demonstrated. Furthermore, a finite element implementation is proposed and applied to instructive test cases and to real images. In the non-viscous case this is compared to the algorithm proposed by Benamou and Brenier including a discretization of the source term. Finally, the model is generalized to define discrete weighted barycentres with applications to textures and objects.

  9. Fluid-structure interaction including volumetric coupling with homogenised subdomains for modeling respiratory mechanics.

    Science.gov (United States)

    Yoshihara, Lena; Roth, Christian J; Wall, Wolfgang A

    2017-04-01

    In this article, a novel approach is presented for combining standard fluid-structure interaction with additional volumetric constraints to model fluid flow into and from homogenised solid domains. The proposed algorithm is particularly interesting for investigations in the field of respiratory mechanics as it enables the mutual coupling of airflow in the conducting part and local tissue deformation in the respiratory part of the lung by means of a volume constraint. In combination with a classical monolithic fluid-structure interaction approach, a comprehensive model of the human lung can be established that will be useful to gain new insights into respiratory mechanics in health and disease. To illustrate the validity and versatility of the novel approach, three numerical examples including a patient-specific lung model are presented. The proposed algorithm proves its capability of computing clinically relevant airflow distribution and tissue strain data at a level of detail that is not yet achievable, neither with current imaging techniques nor with existing computational models. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  10. Empirical Validation of a Thermal Model of a Complex Roof Including Phase Change Materials

    Directory of Open Access Journals (Sweden)

    Stéphane Guichard

    2015-12-01

    Full Text Available This paper deals with the empirical validation of a building thermal model of a complex roof including a phase change material (PCM. A mathematical model dedicated to PCMs based on the heat apparent capacity method was implemented in a multi-zone building simulation code, the aim being to increase the understanding of the thermal behavior of the whole building with PCM technologies. In order to empirically validate the model, the methodology is based both on numerical and experimental studies. A parametric sensitivity analysis was performed and a set of parameters of the thermal model has been identified for optimization. The use of the generic optimization program called GenOpt® coupled to the building simulation code enabled to determine the set of adequate parameters. We first present the empirical validation methodology and main results of previous work. We then give an overview of GenOpt® and its coupling with the building simulation code. Finally, once the optimization results are obtained, comparisons of the thermal predictions with measurements are found to be acceptable and are presented.

  11. Habitability of super-Earth planets around other suns: models including Red Giant Branch evolution.

    Science.gov (United States)

    von Bloh, W; Cuntz, M; Schröder, K-P; Bounama, C; Franck, S

    2009-01-01

    The unexpected diversity of exoplanets includes a growing number of super-Earth planets, i.e., exoplanets with masses of up to several Earth masses and a similar chemical and mineralogical composition as Earth. We present a thermal evolution model for a 10 Earth-mass planet orbiting a star like the Sun. Our model is based on the integrated system approach, which describes the photosynthetic biomass production and takes into account a variety of climatological, biogeochemical, and geodynamical processes. This allows us to identify a so-called photosynthesis-sustaining habitable zone (pHZ), as determined by the limits of biological productivity on the planetary surface. Our model considers solar evolution during the main-sequence stage and along the Red Giant Branch as described by the most recent solar model. We obtain a large set of solutions consistent with the principal possibility of life. The highest likelihood of habitability is found for "water worlds." Only mass-rich water worlds are able to realize pHZ-type habitability beyond the stellar main sequence on the Red Giant Branch.

  12. A transient energy function for power systems including the induction motor model

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    A construction method for power system transient energy function is studied in the paper, which is simple and universal, and can unify the forms of some current energy functions. A transient energy function including the induction motor model is derived using the method. The unintegrable term is dealt with to get an approximate energy function. Simulations in a 3-bus system and in the WSCC 4-generator system verify the validity of the proposed energy function. The function can be applied to direct transient stability analysis of multi-machine large power systems and provides a tool for analysis of the interaction between the generator angle stability and the load voltage stability.

  13. A laboratory model of the aortic root flow including the coronary arteries

    Science.gov (United States)

    Querzoli, Giorgio; Fortini, Stefania; Espa, Stefania; Melchionna, Simone

    2016-08-01

    Cardiovascular flows have been extensively investigated by means of in vitro models to assess the prosthetic valve performances and to provide insight into the fluid dynamics of the heart and proximal aorta. In particular, the models for the study of the flow past the aortic valve have been continuously improved by including, among other things, the compliance of the vessel and more realistic geometries. The flow within the sinuses of Valsalva is known to play a fundamental role in the dynamics of the aortic valve since they host a recirculation region that interacts with the leaflets. The coronary arteries originate from the ostia located within two of the three sinuses, and their presence may significantly affect the fluid dynamics of the aortic root. In spite of their importance, to the extent of the authors' knowledge, coronary arteries were not included so far when modeling in vitro the transvalvular aortic flow. We present a pulse duplicator consisting of a passively pulsing ventricle, a compliant proximal aorta, and coronary arteries connected to the sinuses of Valsalva. The coronary flow is modulated by a self-regulating device mimicking the physiological mechanism, which is based on the contraction and relaxation of the heart muscle during the cardiac cycle. Results show that the model reproduces satisfyingly the coronary flow. The analysis of the time evolution of the velocity and vorticity fields within the aortic root reveals the main characteristics of the backflow generated through the aorta in order to feed the coronaries during the diastole. Experiments without coronary flow have been run for comparison. Interestingly, the lifetime of the vortex forming in the sinus of Valsalva during the systole is reduced by the presence of the coronaries. As a matter of fact, at the end of the systole, that vortex is washed out because of the suction generated by the coronary flow. Correspondingly, the valve closure is delayed and faster compared to the case with

  14. Improving the WRF model's (version 3.6.1) simulation over sea ice surface through coupling with a complex thermodynamic sea ice model (HIGHTSI)

    Science.gov (United States)

    Yao, Yao; Huang, Jianbin; Luo, Yong; Zhao, Zongci

    2016-06-01

    Sea ice plays an important role in the air-ice-ocean interaction, but it is often represented simply in many regional atmospheric models. The Noah sea ice scheme, which is the only option in the current Weather Research and Forecasting (WRF) model (version 3.6.1), has a problem of energy imbalance due to its simplification in snow processes and lack of ablation and accretion processes in ice. Validated against the Surface Heat Budget of the Arctic Ocean (SHEBA) in situ observations, Noah underestimates the sea ice temperature which can reach -10 °C in winter. Sensitivity tests show that this bias is mainly attributed to the simulation within the ice when a time-dependent ice thickness is specified. Compared with the Noah sea ice model, the high-resolution thermodynamic snow and ice model (HIGHTSI) uses more realistic thermodynamics for snow and ice. Most importantly, HIGHTSI includes the ablation and accretion processes of sea ice and uses an interpolation method which can ensure the heat conservation during its integration. These allow the HIGHTSI to better resolve the energy balance in the sea ice, and the bias in sea ice temperature is reduced considerably. When HIGHTSI is coupled with the WRF model, the simulation of sea ice temperature by the original Polar WRF is greatly improved. Considering the bias with reference to SHEBA observations, WRF-HIGHTSI improves the simulation of surface temperature, 2 m air temperature and surface upward long-wave radiation flux in winter by 6, 5 °C and 20 W m-2, respectively. A discussion on the impact of specifying sea ice thickness in the WRF model is presented. Consistent with previous research, prescribing the sea ice thickness with observational information results in the best simulation among the available methods. If no observational information is available, we present a new method in which the sea ice thickness is initialized from empirical estimation and its further change is predicted by a complex thermodynamic

  15. Including sugar cane in the agro-ecosystem model ORCHIDEE-STICS

    Science.gov (United States)

    Valade, A.; Vuichard, N.; Ciais, P.; Viovy, N.

    2010-12-01

    With 4 million ha currently grown for ethanol in Brazil only, approximately half the global bioethanol production in 2005 (Smeets 2008), and a devoted land area expected to expand globally in the years to come, sugar cane is at the heart of the biofuel debate. Indeed, ethanol made from biomass is currently the most widespread option for alternative transportation fuels. It was originally promoted as a carbon neutral energy resource that could bring energy independence to countries and local opportunities to farmers, until attention was drawn to its environmental and socio-economical drawbacks. It is still not clear to which extent it is a solution or a contributor to climate change mitigation. Dynamic Global Vegetation models can help address these issues and quantify the potential impacts of biofuels on ecosystems at scales ranging from on-site to global. The global agro-ecosystem model ORCHIDEE describes water, carbon and energy exchanges at the soil-atmosphere interface for a limited number of natural and agricultural vegetation types. In order to integrate agricultural management to the simulations and to capture more accurately the specificity of crops' phenology, ORCHIDEE has been coupled with the agronomical model STICS. The resulting crop-oriented vegetation model ORCHIDEE-STICS has been used so far to simulate temperate crops such as wheat, corn and soybean. As a generic ecosystem model, each grid cell can include several vegetation types with their own phenology and management practices, making it suitable to spatial simulations. Here, ORCHIDEE-STICS is altered to include sugar cane as a new agricultural Plant functional Type, implemented and parametrized using the STICS approach. An on-site calibration and validation is then performed based on biomass and flux chamber measurements in several sites in Australia and variables such as LAI, dry weight, heat fluxes and respiration are used to evaluate the ability of the model to simulate the specific

  16. A range of complex probabilistic models for RNA secondary structure prediction that includes the nearest-neighbor model and more.

    Science.gov (United States)

    Rivas, Elena; Lang, Raymond; Eddy, Sean R

    2012-02-01

    The standard approach for single-sequence RNA secondary structure prediction uses a nearest-neighbor thermodynamic model with several thousand experimentally determined energy parameters. An attractive alternative is to use statistical approaches with parameters estimated from growing databases of structural RNAs. Good results have been reported for discriminative statistical methods using complex nearest-neighbor models, including CONTRAfold, Simfold, and ContextFold. Little work has been reported on generative probabilistic models (stochastic context-free grammars [SCFGs]) of comparable complexity, although probabilistic models are generally easier to train and to use. To explore a range of probabilistic models of increasing complexity, and to directly compare probabilistic, thermodynamic, and discriminative approaches, we created TORNADO, a computational tool that can parse a wide spectrum of RNA grammar architectures (including the standard nearest-neighbor model and more) using a generalized super-grammar that can be parameterized with probabilities, energies, or arbitrary scores. By using TORNADO, we find that probabilistic nearest-neighbor models perform comparably to (but not significantly better than) discriminative methods. We find that complex statistical models are prone to overfitting RNA structure and that evaluations should use structurally nonhomologous training and test data sets. Overfitting has affected at least one published method (ContextFold). The most important barrier to improving statistical approaches for RNA secondary structure prediction is the lack of diversity of well-curated single-sequence RNA secondary structures in current RNA databases.

  17. A cloud feedback emulator (CFE, version 1.0) for an intermediate complexity model

    Science.gov (United States)

    Ullman, David J.; Schmittner, Andreas

    2017-02-01

    The dominant source of inter-model differences in comprehensive global climate models (GCMs) are cloud radiative effects on Earth's energy budget. Intermediate complexity models, while able to run more efficiently, often lack cloud feedbacks. Here, we describe and evaluate a method for applying GCM-derived shortwave and longwave cloud feedbacks from 4 × CO2 and Last Glacial Maximum experiments to the University of Victoria Earth System Climate Model. The method generally captures the spread in top-of-the-atmosphere radiative feedbacks between the original GCMs, which impacts the magnitude and spatial distribution of surface temperature changes and climate sensitivity. These results suggest that the method is suitable to incorporate multi-model cloud feedback uncertainties in ensemble simulations with a single intermediate complexity model.

  18. a New Model for Describing Evolution and Control of Disaster System Including Instantaneous and Continuous Actions

    Science.gov (United States)

    Chen, Chang-Kun; Li, Zhi; Sun, Yun-Feng

    A new model for describing the disaster system including instantaneous and continuous action synchronously has been developed. The model is composed of three primary parts, that is, the impact from its causative disaster events, stochastic noise of disaster node and self-healing function, and every part is modeled concretely in terms of their characteristics in practice. Some key parameters, namely link appearance probability, retardation coefficient, ultimate repair capacity of government, dynamical modes considering different disaster evolving chains, and the positions of link with the specific performance in disaster network system are involved. Combined with a case study, the proposed model is applied to a certain disaster evolution system, and the influence law of different parameters on disaster evolution process, in disaster networks with instantaneous-action and/or continuous-action, is presented and compared. The results indicate that the destructive impact in the networks by link in continuous action is far greater an order of magnitude than that in instantaneous action. If a link in continuous action emerges in the disaster network system, properties of the causative event for the link, link appearance probability and its position in the network all have a notable influence to the severity of the disaster network. In addition, some peculiar phenomena are also commendably observed in the disaster evolution process based on the model, such as the multipeaks emerging in the destroyed rate number curve for some crisis nodes caused by their various inducing paths together with the relevant retardation coefficients, the existence of the critical value for ultimate repair capacity to recover the disaster node, and so on.

  19. A model predicting fluindione dose requirement in elderly inpatients including genotypes, body weight, and amiodarone.

    Science.gov (United States)

    Moreau, Caroline; Pautas, Eric; Duverlie, Charlotte; Berndt, Celia; Andro, Marion; Mahé, Isabelle; Emmerich, Joseph; Lacut, Karine; Le Gal, Grégoire; Peyron, Isabelle; Gouin-Thibault, Isabelle; Golmard, Jean-Louis; Loriot, Marie-Anne; Siguret, Virginie

    2014-04-01

    Indandione VKAs have been widely used for decades, especially in Eastern Europe and France. Contrary to coumarin VKAs, the relative contribution of individual factors to the indandione-VKA response is poorly known. In the present multicentre study, we sought to develop and validate a model including genetic and non-genetic factors to predict the daily fluindione dose requirement in elderly patients in whom VKA dosing is challenging. We prospectively recorded clinical and therapeutic data in 230 Caucasian inpatients mean aged 85 ± 6 years, who had reached international normalized ratio stabilisation (range 2.0-3.0) on fluindione. In the derivation cohort (n=156), we analysed 13 polymorphisms in seven genes potentially involved in the pharmacological effect or vitamin-K cycle (VKORC1, CYP4F2, EPHX1) and fluindione metabolism/transport (CYP2C9, CYP2C19, CYP3A5, ABCB1). We built a regression model incorporating non-genetic and genetic data and evaluated the model performances in a separate cohort (n=74).Body-weight, amiodarone intake, VKORC1, CYP4F2, ABCB1 genotypes were retained in the final model, accounting for 31.5% of dose variability. None influence of CYP2C9 was observed. Our final model showed good performances: in 83.3% of the validation cohort patients, the dose was accurately predicted within 5 mg, i.e.the usual step used for adjusting fluindione dosage. In conclusion, in addition to body-weight and amiodarone-intake, pharmacogenetic factors (VKORC1, CYP4F2, ABCB1) related to the pharmacodynamic effect and transport of fluindione significantly influenced the dose requirement in elderly patients while CYP2C9 did not. Studies are required to know whether fluindione could be an alternative VKA in carriers of polymorphic CYP2C9 alleles, hypersensitive to coumarins.

  20. ISOLATION OF HEPATIC OVAL CELLS FROM DIFFERENT MODEL RATS INCLUDING DIABETIC RATS

    Institute of Scientific and Technical Information of China (English)

    LU Ying-li; YE Ting-ting; XIA Fang-zhen; WANG Ning-jian; YANG Hua; CHEN Yi

    2009-01-01

    Objective To acquire oval cells (progenitor stem cells) from adult rat liver of different models including diabetic rats. Methods Thirty Sprague-Dawley (SD) rats were divided into 5 groups randomly: control, 2-acetylaminofluorene (2-AAF), 2-AAF+partial hepatectomy (PH), 2-AAF+carbon tetrachloride (CCl4), and diabetic groups. As two-step collagenase perfusion protocol of Seglen, oval cells were isolated by Percoll density gradient centrifugation. Thy1.1 positive cells were sorted by flow cytometry, and then cultured in Dulbeccos minimum Eagles medium (DMEM). Immunofluorescence staining was applied to labelling Thy1.1. Results Different rates of Thy1.1 positive oval cells were found in different rat model groups: 0.5% in 2-AAF, 0.3% in 2-hAAF+PH, 0.2% in 2-AAF+CCl4 , 0.1% in diabetic, and 0.0% in control. Isolated cells adhered to plate with fusiform or polygon as epithelial cells. Conclusion Progenitor stem cells exist in injured liver tissue including those from diabetic rats.

  1. Global assessment of Vegetation Index and Phenology Lab (VIP and Global Inventory Modeling and Mapping Studies (GIMMS version 3 products

    Directory of Open Access Journals (Sweden)

    M. Marshall

    2015-06-01

    Full Text Available Earth observation based long-term global vegetation index products are used by scientists from a wide range of disciplines concerned with global change. Inter-comparison studies are commonly performed to keep the user community informed on the consistency and accuracy of such records as they evolve. In this study, we compared two new records: (1 Global Inventory Modeling and Mapping Studies (GIMMS Normalized Difference Vegetation Index Version 3 (NDVI3g and (2 Vegetation Index and Phenology Lab (VIP Version 3 NDVI (NDVI3v and Enhanced Vegetation Index 2 (EVI3v. We evaluated the two records via three experiments that addressed the primary use of such records in global change research: (1 prediction of the Leaf Area Index (LAI used in light-use efficiency modeling, (2 estimation of vegetation climatology in Soil-Vegetation-Atmosphere Transfer models, and (3 trend analysis of the magnitude and phenology of vegetation productivity. Experiment one, unlike previous inter-comparison studies, was performed with a unique Landsat 30 m spatial resolution and in situ LAI database for major crop types on five continents. Overall, the two records showed a high level of agreement both in direction and magnitude on a monthly basis, though VIP values were higher and more variable and showed lower correlations and higher error with in situ LAI. The records were most consistent at northern latitudes during the primary growing season and southern latitudes and the tropics throughout much of the year, while the records were less consistent at northern latitudes during green-up and senescence and in the great deserts of the world throughout much of the year. The two records were also highly consistent in terms of trend direction/magnitude, showing a 30+ year increase (decrease in NDVI over much of the globe (tropical rainforests. The two records were less consistent in terms of timing due to the poor correlation of the records during start and end of growing season.

  2. Dynamic modelling and analysis of multi-machine power systems including wind farms

    Science.gov (United States)

    Tabesh, Ahmadreza

    2005-11-01

    This thesis introduces a small-signal dynamic model, based on a frequency response approach, for the analysis of a multi-machine power system with special focus on an induction machine based wind farm. The proposed approach is an alternative method to the conventional eigenvalue analysis method which is widely employed for small-signal dynamic analyses of power systems. The proposed modelling approach is successfully applied and evaluated for a power system that (i) includes multiple synchronous generators, and (ii) a wind farm based on either fixed-speed, variable-speed, or doubly-fed induction machine based wind energy conversion units. The salient features of the proposed method, as compared with the conventional eigenvalue analysis method, are: (i) computational efficiency since the proposed method utilizes the open-loop transfer-function matrix of the system, (ii) performance indices that are obtainable based on frequency response data and quantitatively describe the dynamic behavior of the system, and (iii) capability to formulate various wind energy conversion unit, within a wind farm, in a modular form. The developed small-signal dynamic model is applied to a set of multi-machine study systems and the results are validated based on comparison (i) with digital time-domain simulation results obtained from PSCAD/EMTDC software tool, and (ii) where applicable with eigenvalue analysis results.

  3. A Hydrological Concept including Lateral Water Flow Compatible with the Biogeochemical Model ForSAFE

    Directory of Open Access Journals (Sweden)

    Giuliana Zanchi

    2016-03-01

    Full Text Available The study presents a hydrology concept developed to include lateral water flow in the biogeochemical model ForSAFE. The hydrology concept was evaluated against data collected at Svartberget in the Vindeln Research Forest in Northern Sweden. The results show that the new concept allows simulation of a saturated and an unsaturated zone in the soil as well as water flow that reaches the stream comparable to measurements. The most relevant differences compared to streamflow measurements are that the model simulates a higher base flow in winter and lower flow peaks after snowmelt. These differences are mainly caused by the assumptions made to regulate the percolation at the bottom of the simulated soil columns. The capability for simulating lateral flows and a saturated zone in ForSAFE can greatly improve the simulation of chemical exchange in the soil and export of elements from the soil to watercourses. Such a model can help improve the understanding of how environmental changes in the forest landscape will influence chemical loads to surface waters.

  4. Modeling within-host dynamics of influenza virus infection including immune responses.

    Directory of Open Access Journals (Sweden)

    Kasia A Pawelek

    Full Text Available Influenza virus infection remains a public health problem worldwide. The mechanisms underlying viral control during an uncomplicated influenza virus infection are not fully understood. Here, we developed a mathematical model including both innate and adaptive immune responses to study the within-host dynamics of equine influenza virus infection in horses. By comparing modeling predictions with both interferon and viral kinetic data, we examined the relative roles of target cell availability, and innate and adaptive immune responses in controlling the virus. Our results show that the rapid and substantial viral decline (about 2 to 4 logs within 1 day after the peak can be explained by the killing of infected cells mediated by interferon activated cells, such as natural killer cells, during the innate immune response. After the viral load declines to a lower level, the loss of interferon-induced antiviral effect and an increased availability of target cells due to loss of the antiviral state can explain the observed short phase of viral plateau in which the viral level remains unchanged or even experiences a minor second peak in some animals. An adaptive immune response is needed in our model to explain the eventual viral clearance. This study provides a quantitative understanding of the biological factors that can explain the viral and interferon kinetics during a typical influenza virus infection.

  5. A phase-field model for incoherent martensitic transformations including plastic accommodation processes in the austenite

    Science.gov (United States)

    Kundin, J.; Raabe, D.; Emmerich, H.

    2011-10-01

    If alloys undergo an incoherent martensitic transformation, then plastic accommodation and relaxation accompany the transformation. To capture these mechanisms we develop an improved 3D microelastic-plastic phase-field model. It is based on the classical concepts of phase-field modeling of microelastic problems (Chen, L.Q., Wang Y., Khachaturyan, A.G., 1992. Philos. Mag. Lett. 65, 15-23). In addition to these it takes into account the incoherent formation of accommodation dislocations in the austenitic matrix, as well as their inheritance into the martensitic plates based on the crystallography of the martensitic transformation. We apply this new phase-field approach to the butterfly-type martensitic transformation in a Fe-30 wt%Ni alloy in direct comparison to recent experimental data (Sato, H., Zaefferer, S., 2009. Acta Mater. 57, 1931-1937). It is shown that the therein proposed mechanisms of plastic accommodation during the transformation can indeed explain the experimentally observed morphology of the martensitic plates as well as the orientation between martensitic plates and the austenitic matrix. The developed phase-field model constitutes a general simulations approach for different kinds of phase transformation phenomena that inherently include dislocation based accommodation processes. The approach does not only predict the final equilibrium topology, misfit, size, crystallography, and aspect ratio of martensite-austenite ensembles resulting from a transformation, but it also resolves the associated dislocation dynamics and the distribution, and the size of the crystals itself.

  6. Hydrogen Macro System Model User Guide, Version 1.2.1

    Energy Technology Data Exchange (ETDEWEB)

    Ruth, M.; Diakov, V.; Sa, T.; Goldsby, M.; Genung, K.; Hoseley, R.; Smith, A.; Yuzugullu, E.

    2009-07-01

    The Hydrogen Macro System Model (MSM) is a simulation tool that links existing and emerging hydrogen-related models to perform rapid, cross-cutting analysis. It allows analysis of the economics, primary energy-source requirements, and emissions of hydrogen production and delivery pathways.

  7. A surplus production model including environmental effects: Application to the Senegalese white shrimp stocks

    Science.gov (United States)

    Thiaw, Modou; Gascuel, Didier; Jouffre, Didier; Thiaw, Omar Thiom

    2009-12-01

    In Senegal, two stocks of white shrimp ( Penaeusnotialis) are intensively exploited, one in the north and another in the south. We used surplus production models including environmental effects to analyse their changes in abundance over the past 10 years and to estimate their Maximum Sustainable Yield (MSY) and the related fishing effort ( EMSY). First, yearly abundance indices were estimated from commercial statistics using GLM techniques. Then, two environmental indices were alternatively tested in the model: the coastal upwelling intensity from wind speeds provided by the SeaWifs database and the primary production derived from satellite infrared images of chlorophyll a. Models were fitted, with or without the environmental effect, to the 1996-2005 time series. They express stock abundance and catches as functions of the fishing effort and the environmental index (when considered). For the northern stock, fishing effort and abundance fluctuate over the period without any clear trends. The model based on the upwelling index explains 64.9% of the year-to-year variability. It shows that the stock was slightly overexploited in 2002-2003 and is now close to full exploitation. Stock abundance strongly depends on environmental conditions; consequently, the MSY estimate varies from 300 to 900 tons according to the upwelling intensity. For the southern stock, fishing effort has strongly increased over the past 10 years, while abundance has been reduced 4-fold. The environment has a significant effect on abundance but only explains a small part of the year-to-year variability. The best fit is obtained using the primary production index ( R2 = 0.75), and the stock is now significantly overfished regardless of environmental conditions. MSY varies from 1200 to 1800 tons according to environmental conditions. Finally, in northern Senegal, the upwelling is highly variable from year to year and constitutes the major factor determining productivity. In the south, hydrodynamic

  8. Hybrid discrete-continuum modeling for transport, biofilm development and solid restructuring including electrostatic effects

    Science.gov (United States)

    Prechtel, Alexander; Ray, Nadja; Rupp, Andreas

    2017-04-01

    We want to present an approach for the mathematical, mechanistic modeling and numerical treatment of processes leading to the formation, stability, and turnover of soil micro-aggregates. This aims at deterministic aggregation models including detailed mechanistic pore-scale descriptions to account for the interplay of geochemistry and microbiology, and the link to soil functions as, e.g., the porosity. We therefore consider processes at the pore scale and the mesoscale (laboratory scale). At the pore scale transport by diffusion, advection, and drift emerging from electric forces can be taken into account, in addition to homogeneous and heterogeneous reactions of species. In the context of soil micro-aggregates the growth of biofilms or other glueing substances as EPS (extracellular polymeric substances) is important and affects the structure of the pore space in space and time. This model is upscaled mathematically in the framework of (periodic) homogenization to transfer it to the mesoscale resulting in effective coefficients/parameters there. This micro-macro model thus couples macroscopic equations that describe the transport and fluid flow at the scale of the porous medium (mesoscale) with averaged time- and space-dependent coefficient functions. These functions may be explicitly computed by means of auxiliary cell problems (microscale). Finally, the pore space in which the cell problems are defined is time and space dependent and its geometry inherits information from the transport equation's solutions. The microscale problems rely on versatile combinations of cellular automata and discontiuous Galerkin methods while on the mesoscale mixed finite elements are used. The numerical simulations allow to study the interplay between these processes.

  9. PhytoSFDM version 1.0.0: Phytoplankton Size and Functional Diversity Model

    Science.gov (United States)

    Acevedo-Trejos, Esteban; Brandt, Gunnar; Smith, S. Lan; Merico, Agostino

    2016-11-01

    Biodiversity is one of the key mechanisms that facilitate the adaptive response of planktonic communities to a fluctuating environment. How to allow for such a flexible response in marine ecosystem models is, however, not entirely clear. One particular way is to resolve the natural complexity of phytoplankton communities by explicitly incorporating a large number of species or plankton functional types. Alternatively, models of aggregate community properties focus on macroecological quantities such as total biomass, mean trait, and trait variance (or functional trait diversity), thus reducing the observed natural complexity to a few mathematical expressions. We developed the PhytoSFDM modelling tool, which can resolve species discretely and can capture aggregate community properties. The tool also provides a set of methods for treating diversity under realistic oceanographic settings. This model is coded in Python and is distributed as open-source software. PhytoSFDM is implemented in a zero-dimensional physical scheme and can be applied to any location of the global ocean. We show that aggregate community models reduce computational complexity while preserving relevant macroecological features of phytoplankton communities. Compared to species-explicit models, aggregate models are more manageable in terms of number of equations and have faster computational times. Further developments of this tool should address the caveats associated with the assumptions of aggregate community models and about implementations into spatially resolved physical settings (one-dimensional and three-dimensional). With PhytoSFDM we embrace the idea of promoting open-source software and encourage scientists to build on this modelling tool to further improve our understanding of the role that biodiversity plays in shaping marine ecosystems.

  10. Environmental assessment of biofuel chains based on ecosystem modelling, including land-use change effects

    Science.gov (United States)

    Gabrielle, B.; Gagnaire, N.; Massad, R.; Prieur, V.; Python, Y.

    2012-04-01

    The potential greenhouse gas (GHG) savings resulting from the displacement of fossil energy sources by bioenergy mostly hinges on the uncertainty on the magnitude of nitrous oxide (N2O) emissions from arable soils occuring during feedstock production. These emissions are broadly related to fertilizer nitrogen input rates, but largely controlled by soil and climate factors which makes their estimation highly uncertain. Here, we set out to improve estimates of N2O emissions from bioenergy feedstocks by using ecosystem models and measurements and modeling of atmospheric N2O in the greater Paris (France) area. Ground fluxes were measured in two locations to assess the effect of soil type and management, crop type (including lignocellulosics such as triticale, switchgrass and miscanthus), and climate on N2O emission rates and dynamics. High-resolution maps of N2O emissions were generated over the Ile-de-France region (around Paris) with two ecosystem models using geographical databases on soils, weather data, land-use and crop management. The models were tested against ground flux measurements and the emission maps were fed into the atmospheric chemistry-transport model CHIMERE. The maps were tested by comparing the CHIMERE simulations with time series of N2O concentrations measured at various heights above the ground in two locations in 2007. The emissions of N2O, as integrated over the region, were used in a life-cycle assessment of representative biofuel pathways: bioethanol from wheat and sugar-beet (1st generation), and miscanthus (2nd generation chain); bio-diesel from oilseed rape. Effects related to direct and indirect land-use changes (in particular on soil carbon stocks) were also included in the assessment based on various land-use scenarios and literature references. The potential deployment of miscanthus was simulated by assuming it would be grown on the current sugar-beet growing area in Ile-de-France, or by converting land currently under permanent fallow

  11. Description of the Mountain Cloud Chemistry Program version of the PLUVIUS MOD 5. 0 reactive storm simulation model

    Energy Technology Data Exchange (ETDEWEB)

    Luecken, D.J.; Whiteman, C.D.; Chapman, E.G.; Andrews, G.L.; Bader, D.C.

    1987-07-01

    Damage to forest ecosystems on mountains in the eastern United States has prompted a study conducted for the US Environmental Protection Agency's Mountain Cloud Chemistry Program (MCCP). This study has led to the development of a numerical model called MCCP PLUVIUS, which has been used to investigate the chemical transformations and cloud droplet deposition in shallow, nonprecipitating orographic clouds. The MCCP PLUVIUS model was developed as a specialized version of the existing PLUVIUS MOD 5.0 reactive storm model. It is capable of simulating aerosol scavenging, nonreactive gas scavenging, aqueous phase SO/sub 2/ reactions, and cloud water deposition. A description of the new model is provided along with information on model inputs and outputs, as well as suggestions for its further development. The MCCP PLUVIUS incorporates a new method to determine the depth of the layer of air which flows over a mountaintop to produce an orographic cloud event. It provides a new method for calculating hydrogen ion concentrations, and provides updated expressions and values for solubility, dissociation and reaction rate constants.

  12. FAME: Friendly Applied Modelling Environment. Version 2.2 User Manual

    NARCIS (Netherlands)

    Wortelboer FG; Aldenberg T

    1989-01-01

    FAME (Friendly Applied Modelling Environment) is een algemene modelleer omgeving, ontwikkeld voor de dynamische simulatie van waterkwaliteitsmodellen. De modellen worden beschreven als sets van differentiaalvergelijkingen, waarbij van een algemene notatie gebruik wordt gemaakt. Geen kennis van een

  13. Technical manual for basic version of the Markov chain nest productivity model (MCnest)

    Science.gov (United States)

    The Markov Chain Nest Productivity Model (or MCnest) integrates existing toxicity information from three standardized avian toxicity tests with information on species life history and the timing of pesticide applications relative to the timing of avian breeding seasons to quantit...

  14. User’s manual for basic version of MCnest Markov chain nest productivity model

    Science.gov (United States)

    The Markov Chain Nest Productivity Model (or MCnest) integrates existing toxicity information from three standardized avian toxicity tests with information on species life history and the timing of pesticide applications relative to the timing of avian breeding seasons to quantit...

  15. Illustrating and homology modeling the proteins of the Zika virus [version 2; referees: 2 approved

    Directory of Open Access Journals (Sweden)

    Sean Ekins

    2016-09-01

    Full Text Available The Zika virus (ZIKV is a flavivirus of the family Flaviviridae, which is similar to dengue virus, yellow fever and West Nile virus. Recent outbreaks in South America, Latin America, the Caribbean and in particular Brazil have led to concern for the spread of the disease and potential to cause Guillain-Barré syndrome and microcephaly. Although ZIKV has been known of for over 60 years there is very little in the way of knowledge of the virus with few publications and no crystal structures. No antivirals have been tested against it either in vitro or in vivo. ZIKV therefore epitomizes a neglected disease. Several suggested steps have been proposed which could be taken to initiate ZIKV antiviral drug discovery using both high throughput screens as well as structure-based design based on homology models for the key proteins. We now describe preliminary homology models created for NS5, FtsJ, NS4B, NS4A, HELICc, DEXDc, peptidase S7, NS2B, NS2A, NS1, E stem, glycoprotein M, propeptide, capsid and glycoprotein E using SWISS-MODEL. Eleven out of 15 models pass our model quality criteria for their further use. While a ZIKV glycoprotein E homology model was initially described in the immature conformation as a trimer, we now describe the mature dimer conformer which allowed the construction of an illustration of the complete virion. By comparing illustrations of ZIKV based on this new homology model and the dengue virus crystal structure we propose potential differences that could be exploited for antiviral and vaccine design. The prediction of sites for glycosylation on this protein may also be useful in this regard. While we await a cryo-EM structure of ZIKV and eventual crystal structures of the individual proteins, these homology models provide the community with a starting point for structure-based design of drugs and vaccines as well as a for computational virtual screening.

  16. Development and validation of THUMS version 5 with 1D muscle models for active and passive automotive safety research.

    Science.gov (United States)

    Kimpara, Hideyuki; Nakahira, Yuko; Iwamoto, Masami

    2016-08-01

    Accurately predicting the occupant kinematics is critical to better understand the injury mechanisms during an automotive crash event. The objectives of this study were to develop and validate a finite element (FE) model of the human body integrated with an active muscle model called Total HUman Model for Safety (THUMS) version 5, which has the body size of the 50th percentile American adult male (AM50). This model is characterized by being able to generate a force owing to muscle tone and to predict the occupant response during an automotive crash event. Deformable materials were assigned to all body parts of THUMS model in order to evaluate the injury probabilities. Each muscle was modeled as a Hill-type muscle model with 800 muscle-tendon compartments of 1D truss and seatbelt elements covering whole joints in the neck, thorax, lumbar region, and upper and lower extremities. THUMS was validated against 36 series of post-mortem human surrogate (PMHS) and volunteer tests on frontal, lateral, and rear impacts. The muscle architectural and kinetic properties for the hip, knee, shoulder, and elbow joints were validated in terms of the moment arms and maximum isometric joint torques over a wide range of joint angles. The muscular moment arms and maximum joint torques estimated from THUMS occupant model with 1D muscles agreed with the experimental data for a wide range of joint angles. Therefore, this model has the potential to predict the occupant kinematics and injury outcomes considering appropriate human body motions associated with various human body postures, such as sitting or standing.

  17. Validation of gyrokinetic modelling of light impurity transport including rotation in ASDEX Upgrade

    CERN Document Server

    Casson, F J; Angioni, C; Camenen, Y; Dux, R; Fable, E; Fischer, R; Geiger, B; Manas, P; Menchero, L; Tardini, G

    2013-01-01

    Upgraded spectroscopic hardware and an improved impurity concentration calculation allow accurate determination of boron density in the ASDEX Upgrade tokamak. A database of boron measurements is compared to quasilinear and nonlinear gyrokinetic simulations including Coriolis and centrifugal rotational effects over a range of H-mode plasma regimes. The peaking of the measured boron profiles shows a strong anti-correlation with the plasma rotation gradient, via a relationship explained and reproduced by the theory. It is demonstrated that the rotodiffusive impurity flux driven by the rotation gradient is required for the modelling to reproduce the hollow boron profiles at higher rotation gradients. The nonlinear simulations validate the quasilinear approach, and, with the addition of perpendicular flow shear, demonstrate that each symmetry breaking mechanism that causes momentum transport also couples to rotodiffusion. At lower rotation gradients, the parallel compressive convection is required to match the mos...

  18. Models that include supercoiling of topological domains reproduce several known features of interphase chromosomes.

    Science.gov (United States)

    Benedetti, Fabrizio; Dorier, Julien; Burnier, Yannis; Stasiak, Andrzej

    2014-03-01

    Understanding the structure of interphase chromosomes is essential to elucidate regulatory mechanisms of gene expression. During recent years, high-throughput DNA sequencing expanded the power of chromosome conformation capture (3C) methods that provide information about reciprocal spatial proximity of chromosomal loci. Since 2012, it is known that entire chromatin in interphase chromosomes is organized into regions with strongly increased frequency of internal contacts. These regions, with the average size of ∼1 Mb, were named topological domains. More recent studies demonstrated presence of unconstrained supercoiling in interphase chromosomes. Using Brownian dynamics simulations, we show here that by including supercoiling into models of topological domains one can reproduce and thus provide possible explanations of several experimentally observed characteristics of interphase chromosomes, such as their complex contact maps.

  19. Modeling and analysis of overmodulation in erbium-doped fiber amplifiers including amplified spontaneous emission

    Science.gov (United States)

    Sharma, Reena; Raghuwanshi, Sanjeev Kumar

    2017-02-01

    Line surveillance and management information in erbium-doped fiber amplifiers (EDFAs) can be broadcast by modulating the amplitude of the low-frequency lightwave information signal, the process termed as overmodulation in the literature. This paper presents systematic solutions for the overmodulated pump and information signal transfer functions for EDFA. It includes amplified spontaneous emission (ASE) that has an impact on outcomes in the high-gain system. To the extent of our belief, the methodical model simulated with the current approach leads to a distinct perspective of an outcome in the respective field. The test bed described here is realistic. It specifically represents the overmodulation behavior in an EDFA under the influence of ASE.

  20. Hybrid Model of the Context Dependent Vestibulo-Ocular Reflex: Implications for Vergence-Version Interactions

    Directory of Open Access Journals (Sweden)

    Mina eRanjbaran

    2015-02-01

    Full Text Available The vestibulo-ocular reflex (VOR is an involuntary eye movement evoked by head movements. It is also influenced by viewing distance. This paper presents a hybrid nonlinear bilateral model for the horizontal angular vestibulo-ocular reflex (AVOR in the dark. The model is based on known interconnections between saccadic burst circuits in the brainstem and ocular premotor areas in the vestibular nuclei during fast and slow phase intervals of nystagmus. We implemented a viable switching strategy for the timing of nystagmus events to allow emulation of real nystagmus data. The performance of the hybrid model is evaluated with simulations, and results are consistent with experimental observations. The hybrid model replicates realistic AVOR nystagmus patterns during sinusoidal or step head rotations in the dark and during interactions with vergence, e.g. fixation distance. By simply assigning proper nonlinear neural computations at the premotor level, the model replicates all reported experimental observations. This work sheds light on potential underlying neural mechanisms driving the context dependent AVOR and explains contradictory results in the literature. Moreover, context-dependent behaviors in more complex motor systems could also rely on local nonlinear neural computations.

  1. Long-term Industrial Energy Forecasting (LIEF) model (18-sector version)

    Energy Technology Data Exchange (ETDEWEB)

    Ross, M.H. (Univ. of Michigan, Ann Arbor, MI (United States). Dept. of Physics); Thimmapuram, P.; Fisher, R.E.; Maciorowski, W. (Argonne National Lab., IL (United States))

    1993-05-01

    The new 18-sector Long-term Industrial Energy Forecasting (LIEF) model is designed for convenient study of future industrial energy consumption, taking into account the composition of production, energy prices, and certain kinds of policy initiatives. Electricity and aggregate fossil fuels are modeled. Changes in energy intensity in each sector are driven by autonomous technological improvement (price-independent trend), the opportunity for energy-price-sensitive improvements, energy price expectations, and investment behavior. Although this decision-making framework involves more variables than the simplest econometric models, it enables direct comparison of an econometric approach with conservation supply curves from detailed engineering analysis. It also permits explicit consideration of a variety of policy approaches other than price manipulation. The model is tested in terms of historical data for nine manufacturing sectors, and parameters are determined for forecasting purposes. Relatively uniform and satisfactory parameters are obtained from this analysis. In this report, LIEF is also applied to create base-case and demand-side management scenarios to briefly illustrate modeling procedures and outputs.

  2. Long-term Industrial Energy Forecasting (LIEF) model (18-sector version)

    Energy Technology Data Exchange (ETDEWEB)

    Ross, M.H. [Univ. of Michigan, Ann Arbor, MI (US). Dept. of Physics; Thimmapuram, P.; Fisher, R.E.; Maciorowski, W. [Argonne National Lab., IL (US)

    1993-05-01

    The new 18-sector Long-term Industrial Energy Forecasting (LIEF) model is designed for convenient study of future industrial energy consumption, taking into account the composition of production, energy prices, and certain kinds of policy initiatives. Electricity and aggregate fossil fuels are modeled. Changes in energy intensity in each sector are driven by autonomous technological improvement (price-independent trend), the opportunity for energy-price-sensitive improvements, energy price expectations, and investment behavior. Although this decision-making framework involves more variables than the simplest econometric models, it enables direct comparison of an econometric approach with conservation supply curves from detailed engineering analysis. It also permits explicit consideration of a variety of policy approaches other than price manipulation. The model is tested in terms of historical data for nine manufacturing sectors, and parameters are determined for forecasting purposes. Relatively uniform and satisfactory parameters are obtained from this analysis. In this report, LIEF is also applied to create base-case and demand-side management scenarios to briefly illustrate modeling procedures and outputs.

  3. Hybrid model of the context dependent vestibulo-ocular reflex: implications for vergence-version interactions.

    Science.gov (United States)

    Ranjbaran, Mina; Galiana, Henrietta L

    2015-01-01

    The vestibulo-ocular reflex (VOR) is an involuntary eye movement evoked by head movements. It is also influenced by viewing distance. This paper presents a hybrid nonlinear bilateral model for the horizontal angular vestibulo-ocular reflex (AVOR) in the dark. The model is based on known interconnections between saccadic burst circuits in the brainstem and ocular premotor areas in the vestibular nuclei during fast and slow phase intervals of nystagmus. We implemented a viable switching strategy for the timing of nystagmus events to allow emulation of real nystagmus data. The performance of the hybrid model is evaluated with simulations, and results are consistent with experimental observations. The hybrid model replicates realistic AVOR nystagmus patterns during sinusoidal or step head rotations in the dark and during interactions with vergence, e.g., fixation distance. By simply assigning proper nonlinear neural computations at the premotor level, the model replicates all reported experimental observations. This work sheds light on potential underlying neural mechanisms driving the context dependent AVOR and explains contradictory results in the literature. Moreover, context-dependent behaviors in more complex motor systems could also rely on local nonlinear neural computations.

  4. Exergoeconomic performance optimization for a steady-flow endoreversible refrigeration model including six typical cycles

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Lingen; Kan, Xuxian; Sun, Fengrui; Wu, Feng [College of Naval Architecture and Power, Naval University of Engineering, Wuhan 430033 (China)

    2013-07-01

    The operation of a universal steady flow endoreversible refrigeration cycle model consisting of a constant thermal-capacity heating branch, two constant thermal-capacity cooling branches and two adiabatic branches is viewed as a production process with exergy as its output. The finite time exergoeconomic performance optimization of the refrigeration cycle is investigated by taking profit rate optimization criterion as the objective. The relations between the profit rate and the temperature ratio of working fluid, between the COP (coefficient of performance) and the temperature ratio of working fluid, as well as the optimal relation between profit rate and the COP of the cycle are derived. The focus of this paper is to search the compromised optimization between economics (profit rate) and the utilization factor (COP) for endoreversible refrigeration cycles, by searching the optimum COP at maximum profit, which is termed as the finite-time exergoeconomic performance bound. Moreover, performance analysis and optimization of the model are carried out in order to investigate the effect of cycle process on the performance of the cycles using numerical example. The results obtained herein include the performance characteristics of endoreversible Carnot, Diesel, Otto, Atkinson, Dual and Brayton refrigeration cycles.

  5. Exergoeconomic performance optimization for a steady-flow endoreversible refrigeration model including six typical cycles

    Directory of Open Access Journals (Sweden)

    Lingen Chen, Xuxian Kan, Fengrui Sun, Feng Wu

    2013-01-01

    Full Text Available The operation of a universal steady flow endoreversible refrigeration cycle model consisting of a constant thermal-capacity heating branch, two constant thermal-capacity cooling branches and two adiabatic branches is viewed as a production process with exergy as its output. The finite time exergoeconomic performance optimization of the refrigeration cycle is investigated by taking profit rate optimization criterion as the objective. The relations between the profit rate and the temperature ratio of working fluid, between the COP (coefficient of performance and the temperature ratio of working fluid, as well as the optimal relation between profit rate and the COP of the cycle are derived. The focus of this paper is to search the compromised optimization between economics (profit rate and the utilization factor (COP for endoreversible refrigeration cycles, by searching the optimum COP at maximum profit, which is termed as the finite-time exergoeconomic performance bound. Moreover, performance analysis and optimization of the model are carried out in order to investigate the effect of cycle process on the performance of the cycles using numerical example. The results obtained herein include the performance characteristics of endoreversible Carnot, Diesel, Otto, Atkinson, Dual and Brayton refrigeration cycles.

  6. Challenges of including nitrogen effects on decomposition in earth system models

    Science.gov (United States)

    Hobbie, S. E.

    2011-12-01

    Despite the importance of litter decomposition for ecosystem fertility and carbon balance, key uncertainties remain about how this fundamental process is affected by nitrogen (N) availability. Nevertheless, resolving such uncertainties is critical for mechanistic inclusion of such processes in earth system models, towards predicting the ecosystem consequences of increased anthropogenic reactive N. Towards that end, we have conducted a series of experiments examining nitrogen effects on litter decomposition. We found that both substrate N and externally supplied N (regardless of form) accelerated the initial decomposition rate. Faster initial decomposition rates were linked to the higher activity of carbohydrate-degrading enzymes associated with externally supplied N and the greater relative abundances of Gram negative and Gram positive bacteria associated with green leaves and externally supplied organic N (assessed using phospholipid fatty acid analysis, PLFA). By contrast, later in decomposition, externally supplied N slowed decomposition, increasing the fraction of slowly decomposing litter and reducing lignin-degrading enzyme activity and relative abundances of Gram negative and Gram positive bacteria. Our results suggest that elevated atmospheric N deposition may have contrasting effects on the dynamics of different soil carbon pools, decreasing mean residence times of active fractions comprising very fresh litter, while increasing those of more slowly decomposing fractions including more processed litter. Incorporating these contrasting effects of N on decomposition processes into models is complicated by lingering uncertainties about how these effects generalize across ecosystems and substrates.

  7. A Model for One-Dimensional Coherent Synchrotron Radiation including Short-Range Effects

    CERN Document Server

    Ryne, Robert D; Qiang, Ji; Yampolsky, Nikolai

    2012-01-01

    A new model is presented for simulating coherent synchrotron radiation (CSR) in one dimension. The method is based on convolving an integrated Green function (IGF) with the longitudinal charge density. Since it is based on an IGF, the accuracy of this approach is determined by how well one resolves the charge density and not by resolving the single particle wake function. Since short-range wakefield effects are included analytically, the approach can be much more efficient than ordinary (non-IGF) approaches in situations where the wake function and charge density have disparate spatial scales. Two cases are presented: one derived from the full wake including short-range effects, and one derived from the asymptotic wake. In the latter case the algorithm contains the same physics as others based on the asymptotic approximation, but requires only the line charge density and not its derivative. Examples are presented that illustrate the limitations of the asymptotic-wake approximation, and that illustrate how mic...

  8. INTERIOR MODELS OF SATURN: INCLUDING THE UNCERTAINTIES IN SHAPE AND ROTATION

    Energy Technology Data Exchange (ETDEWEB)

    Helled, Ravit [Department of Geophysics, Atmospheric and Planetary Sciences, Tel-Aviv University, Tel-Aviv (Israel); Guillot, Tristan [Universite de Nice-Sophia Antipolis, Observatoire de la Cote d' Azur, CNRS UMR 7293, BP 4229, F-06304 Nice (France)

    2013-04-20

    The accurate determination of Saturn's gravitational coefficients by Cassini could provide tighter constraints on Saturn's internal structure. Also, occultation measurements provide important information on the planetary shape which is often not considered in structure models. In this paper we explore how wind velocities and internal rotation affect the planetary shape and the constraints on Saturn's interior. We show that within the geodetic approach the derived physical shape is insensitive to the assumed deep rotation. Saturn's re-derived equatorial and polar radii at 100 mbar are found to be 54,445 {+-} 10 km and 60,365 {+-} 10 km, respectively. To determine Saturn's interior, we use one-dimensional three-layer hydrostatic structure models and present two approaches to include the constraints on the shape. These approaches, however, result in only small differences in Saturn's derived composition. The uncertainty in Saturn's rotation period is more significant: with Voyager's 10{sup h}39{sup m} period, the derived mass of heavy elements in the envelope is 0-7 M{sub Circled-Plus }. With a rotation period of 10{sup h}32{sup m}, this value becomes <4 M{sub Circled-Plus }, below the minimum mass inferred from spectroscopic measurements. Saturn's core mass is found to depend strongly on the pressure at which helium phase separation occurs, and is estimated to be 5-20 M{sub Circled-Plus }. Lower core masses are possible if the separation occurs deeper than 4 Mbar. We suggest that the analysis of Cassini's radio occultation measurements is crucial to test shape models and could lead to constraints on Saturn's rotation profile and departures from hydrostatic equilibrium.

  9. High performance computation of landscape genomic models including local indicators of spatial association.

    Science.gov (United States)

    Stucki, S; Orozco-terWengel, P; Forester, B R; Duruz, S; Colli, L; Masembe, C; Negrini, R; Landguth, E; Jones, M R; Bruford, M W; Taberlet, P; Joost, S

    2016-11-01

    With the increasing availability of both molecular and topo-climatic data, the main challenges facing landscape genomics - that is the combination of landscape ecology with population genomics - include processing large numbers of models and distinguishing between selection and demographic processes (e.g. population structure). Several methods address the latter, either by estimating a null model of population history or by simultaneously inferring environmental and demographic effects. Here we present samβada, an approach designed to study signatures of local adaptation, with special emphasis on high performance computing of large-scale genetic and environmental data sets. samβada identifies candidate loci using genotype-environment associations while also incorporating multivariate analyses to assess the effect of many environmental predictor variables. This enables the inclusion of explanatory variables representing population structure into the models to lower the occurrences of spurious genotype-environment associations. In addition, samβada calculates local indicators of spatial association for candidate loci to provide information on whether similar genotypes tend to cluster in space, which constitutes a useful indication of the possible kinship between individuals. To test the usefulness of this approach, we carried out a simulation study and analysed a data set from Ugandan cattle to detect signatures of local adaptation with samβada, bayenv, lfmm and an FST outlier method (FDIST approach in arlequin) and compare their results. samβada - an open source software for Windows, Linux and Mac OS X available at http://lasig.epfl.ch/sambada - outperforms other approaches and better suits whole-genome sequence data processing.

  10. Including oxygen enhancement ratio in ion beam treatment planning: model implementation and experimental verification

    Science.gov (United States)

    Scifoni, E.; Tinganelli, W.; Weyrather, W. K.; Durante, M.; Maier, A.; Krämer, M.

    2013-06-01

    We present a method for adapting a biologically optimized treatment planning for particle beams to a spatially inhomogeneous tumor sensitivity due to hypoxia, and detected e.g., by PET functional imaging. The TRiP98 code, established treatment planning system for particles, has been extended for including explicitly the oxygen enhancement ratio (OER) in the biological effect calculation, providing the first set up of a dedicated ion beam treatment planning approach directed to hypoxic tumors, TRiP-OER, here reported together with experimental tests. A simple semi-empirical model for calculating the OER as a function of oxygen concentration and dose averaged linear energy transfer, generating input tables for the program is introduced. The code is then extended in order to import such tables coming from the present or alternative models, accordingly and to perform forward and inverse planning, i.e., predicting the survival response of differently oxygenated areas as well as optimizing the required dose for restoring a uniform survival effect in the whole irradiated target. The multiple field optimization results show how the program selects the best beam components for treating the hypoxic regions. The calculations performed for different ions, provide indications for the possible clinical advantages of a multi-ion treatment. Finally the predictivity of the code is tested through dedicated cell culture experiments on extended targets irradiation using specially designed hypoxic chambers, providing a qualitative agreement, despite some limits in full survival calculations arising from the RBE assessment. The comparison of the predictions resulting by using different model tables are also reported.

  11. A Prototypicality Validation of the Comprehensive Assessment of Psychopathic Personality (CAPP) Model Spanish Version.

    Science.gov (United States)

    Flórez, Gerardo; Casas, Alfonso; Kreis, Mette K F; Forti, Leonello; Martínez, Joaquín; Fernández, Juan; Conde, Manuel; Vázquez-Noguerol, Raúl; Blanco, Tania; Hoff, Helge A; Cooke, David J

    2015-10-01

    The Comprehensive Assessment of Psychopathic Personality (CAPP) is a newly developed, lexically based, conceptual model of psychopathy. The content validity of the Spanish language CAPP model was evaluated using prototypicality analysis. Prototypicality ratings were collected from 187 mental health experts and from samples of 143 health professionals and 282 community residents. Across the samples the majority of CAPP items were rated as highly prototypical of psychopathy. The Self, Dominance, and Attachment domains were evaluated as being more prototypical than the Behavioral and Cognitive domains. These findings are consistent with findings from similar studies in other languages and provide further support for the content validation of the CAPP model across languages and the lexical approach.

  12. An integrated assessment modeling framework for uncertainty studies in global and regional climate change: the MIT IGSM-CAM (version 1.0)

    OpenAIRE

    Monier, E.; Scott, J R; A. P. Sokolov; C. E. Forest; C. A. Schlosser

    2013-01-01

    This paper describes a computationally efficient framework for uncertainty studies in global and regional climate change. In this framework, the Massachusetts Institute of Technology (MIT) Integrated Global System Model (IGSM), an integrated assessment model that couples an Earth system model of intermediate complexity to a human activity model, is linked to the National Center for Atmospheric Research (NCAR) Community Atmosphere Model (CAM). Since the MIT IGSM-CAM framework (version 1.0) inc...

  13. Unit testing, model validation, and biological simulation [version 1; referees: 2 approved, 1 approved with reservations

    Directory of Open Access Journals (Sweden)

    Gopal P. Sarma

    2016-08-01

    Full Text Available The growth of the software industry has gone hand in hand with the development of tools and cultural practices for ensuring the reliability of complex pieces of software. These tools and practices are now acknowledged to be essential to the management of modern software. As computational models and methods have become increasingly common in the biological sciences, it is important to examine how these practices can accelerate biological software development and improve research quality. In this article, we give a focused case study of our experience with the practices of unit testing and test-driven development in OpenWorm, an open-science project aimed at modeling Caenorhabditis elegans. We identify and discuss the challenges of incorporating test-driven development into a heterogeneous, data-driven project, as well as the role of model validation tests, a category of tests unique to software which expresses scientific models.

  14. Preliminary site description: Groundwater flow simulations. Simpevarp area (version 1.1) modelled with CONNECTFLOW

    Energy Technology Data Exchange (ETDEWEB)

    Hartley, Lee; Worth, David [Serco Assurance Ltd, Risley (United Kingdom); Gylling, Bjoern; Marsic, Niko [Kemakta Konsult AB, Stockholm (Sweden); Holmen, Johan [Golder Associates, Stockholm (Sweden)

    2004-08-01

    The main objective of this study is to assess the role of known and unknown hydrogeological conditions for the present-day distribution of saline groundwater at the Simpevarp and Laxemar sites. An improved understanding of the paleo-hydrogeology is necessary in order to gain credibility for the Site Descriptive Model in general and the Site Hydrogeological Description in particular. This is to serve as a basis for describing the present hydrogeological conditions as well as predictions of future hydrogeological conditions. This objective implies a testing of: geometrical alternatives in the structural geology and bedrock fracturing, variants in the initial and boundary conditions, and parameter uncertainties (i.e. uncertainties in the hydraulic property assignment). This testing is necessary in order to evaluate the impact on the groundwater flow field of the specified components and to promote proposals of further investigations of the hydrogeological conditions at the site. The general methodology for modelling transient salt transport and groundwater flow using CONNECTFLOW that was developed for Forsmark has been applied successfully also for Simpevarp. Because of time constraints only a key set of variants were performed that focussed on the influences of DFN model parameters, the kinematic porosity, and the initial condition. Salinity data in deep boreholes available at the time of the project was too limited to allow a good calibration exercise. However, the model predictions are compared with the available data from KLX01 and KLX02 below. Once more salinity data is available it may be possible to draw more definite conclusions based on the differences between variants. At the moment though the differences should just be used understand the sensitivity of the models to various input parameters.

  15. Towards a representation of priming on soil carbon decomposition in the global land biosphere model ORCHIDEE (version 1.9.5.2)

    Science.gov (United States)

    Guenet, Bertrand; Esteban Moyano, Fernando; Peylin, Philippe; Ciais, Philippe; Janssens, Ivan A.

    2016-03-01

    Priming of soil carbon decomposition encompasses different processes through which the decomposition of native (already present) soil organic matter is amplified through the addition of new organic matter, with new inputs typically being more labile than the native soil organic matter. Evidence for priming comes from laboratory and field experiments, but to date there is no estimate of its impact at global scale and under the current anthropogenic perturbation of the carbon cycle. Current soil carbon decomposition models do not include priming mechanisms, thereby introducing uncertainty when extrapolating short-term local observations to ecosystem and regional to global scale. In this study we present a simple conceptual model of decomposition priming, called PRIM, able to reproduce laboratory (incubation) and field (litter manipulation) priming experiments. Parameters for this model were first optimized against data from 20 soil incubation experiments using a Bayesian framework. The optimized parameter values were evaluated against another set of soil incubation data independent from the ones used for calibration and the PRIM model reproduced the soil incubations data better than the original, CENTURY-type soil decomposition model, whose decomposition equations are based only on first-order kinetics. We then compared the PRIM model and the standard first-order decay model incorporated into the global land biosphere model ORCHIDEE (Organising Carbon and Hydrology In Dynamic Ecosystems). A test of both models was performed at ecosystem scale using litter manipulation experiments from five sites. Although both versions were equally able to reproduce observed decay rates of litter, only ORCHIDEE-PRIM could simulate the observed priming (R2 = 0.54) in cases where litter was added or removed. This result suggests that a conceptually simple and numerically tractable representation of priming adapted to global models is able to capture the sign and magnitude of the

  16. The big challenges in modeling human and environmental well-being [version 1; referees: 3 approved

    Directory of Open Access Journals (Sweden)

    Shripad Tuljapurkar

    2016-04-01

    Full Text Available This article is a selective review of quantitative research, historical and prospective, that is needed to inform sustainable development policy. I start with a simple framework to highlight how demography and productivity shape human well-being. I use that to discuss three sets of issues and corresponding challenges to modeling: first, population prehistory and early human development and their implications for the future; second, the multiple distinct dimensions of human and environmental well-being and the meaning of sustainability; and, third, inequality as a phenomenon triggered by development and models to examine changing inequality and its consequences. I conclude with a few words about other important factors: political, institutional, and cultural.

  17. First implementation of secondary inorganic aerosols in the MOCAGE version R2.15.0 chemistry transport model

    Science.gov (United States)

    Guth, J.; Josse, B.; Marécal, V.; Joly, M.; Hamer, P.

    2016-01-01

    In this study we develop a secondary inorganic aerosol (SIA) module for the MOCAGE chemistry transport model developed at CNRM. The aim is to have a module suitable for running at different model resolutions and for operational applications with reasonable computing times. Based on the ISORROPIA II thermodynamic equilibrium module, the new version of the model is presented and evaluated at both the global and regional scales. The results show high concentrations of secondary inorganic aerosols in the most polluted regions: Europe, Asia and the eastern part of North America. Asia shows higher sulfate concentrations than other regions thanks to emission reductions in Europe and North America. Using two simulations, one with and the other without secondary inorganic aerosol formation, the global model outputs are compared to previous studies, to MODIS AOD retrievals, and also to in situ measurements from the HTAP database. The model shows a better agreement with MODIS AOD retrievals in all geographical regions after introducing the new SIA scheme. It also provides a good statistical agreement with in situ measurements of secondary inorganic aerosol composition: sulfate, nitrate and ammonium. In addition, the simulation with SIA generally gives a better agreement with observations for secondary inorganic aerosol precursors (nitric acid, sulfur dioxide, ammonia), in particular with a reduction of the modified normalized mean bias (MNMB). At the regional scale, over Europe, the model simulation with SIA is compared to the in situ measurements from the EMEP database and shows a good agreement with secondary inorganic aerosol composition. The results at the regional scale are consistent with those obtained from the global simulations. The AIRBASE database was used to compare the model to regulated air quality pollutants: particulate matter, ozone and nitrogen dioxide concentrations. Introduction of the SIA in MOCAGE provides a reduction in the PM2.5 MNMB of 0.44 on a

  18. User’s Guide for COMBIMAN Programs (COMputerized BIomechanical MAN-Model) Version 5

    Science.gov (United States)

    1982-04-01

    accomplishing this has been to build mock-ups and use an undetermined number of "representative" test pilots to evaluate the work environment and...the "representative" pilots depends on the availability of pilots and the whims of the designers. The COMputerized Blomechanical MAN-model (COMBIMAN...de- fined with letter S, is the field of stereovision , which is the field visible to both eyes simultaneously. The field defined with letter F

  19. The Everglades Depth Estimation Network (EDEN) surface-water model, version 2

    Science.gov (United States)

    Telis, Pamela A.; Xie, Zhixiao; Liu, Zhongwei; Li, Yingru; Conrads, Paul A.

    2015-01-01

    The Everglades Depth Estimation Network (EDEN) is an integrated network of water-level gages, interpolation models that generate daily water-level and water-depth data, and applications that compute derived hydrologic data across the freshwater part of the greater Everglades landscape. The U.S. Geological Survey Greater Everglades Priority Ecosystems Science provides support for EDEN in order for EDEN to provide quality-assured monitoring data for the U.S. Army Corps of Engineers Comprehensive Everglades Restoration Plan.

  20. The Canadian Defence Input-Output Model DIO Version 4.41

    Science.gov (United States)

    2011-09-01

    Output models, for instance to study the regional benefits of different large procure- ment programmes, the data censorship limitation would...excluding potato chips and nuts 113 0960 Cocoa and chocolate 114 0979 Nuts DRDC CORA TM 2011-147 31 Index Code Commodity name 115 0989 Chocolate...Private hospital services 631 5631 Private residential care facilities 632 5632 Child care, outside the home 633 5633 Other health and social services 634

  1. Uncorrelated Encounter Model of the National Airspace System, Version 2.0

    Science.gov (United States)

    2013-08-19

    between two IFR aircraft in oceanic airspace. The reason for this is that one cannot observe encounters of sufficient fidelity in the available data...does not observe a sufficient number of encounters between instrument flight rules ( IFR ) and non- IFR traffic beyond 12 NM from the shore. 4 TABLE 1...Encounter model categories. Aircraft of Interest Intruder Aircraft Location Flight Rule IFR VFR Noncooperative Noncooperative Conventional

  2. Advanced Propagation Model (APM) Version 2.1.04 Computer Software Configuration Item (CSCI) Documents

    Science.gov (United States)

    2007-02-01

    19 3.1.2.17 Ray Trace ( RAYTRACE ) SU................................................................................ 20 3.1.2.18...NOSC TD 1015, Feb. 1984. Horst, M.M., Dyer, F.B., Tuley, M.T., “ Radar Sea Clutter Model,”, IEEE International Conference on Antennas and Propagation...3.1.2.17 Ray Trace ( RAYTRACE ) SU Using standard ray trace techniques, a ray is traced from a starting height and range with a specified starting

  3. System cost model user`s manual, version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Shropshire, D.

    1995-06-01

    The System Cost Model (SCM) was developed by Lockheed Martin Idaho Technologies in Idaho Falls, Idaho and MK-Environmental Services in San Francisco, California to support the Baseline Environmental Management Report sensitivity analysis for the U.S. Department of Energy (DOE). The SCM serves the needs of the entire DOE complex for treatment, storage, and disposal (TSD) of mixed low-level, low-level, and transuranic waste. The model can be used to evaluate total complex costs based on various configuration options or to evaluate site-specific options. The site-specific cost estimates are based on generic assumptions such as waste loads and densities, treatment processing schemes, existing facilities capacities and functions, storage and disposal requirements, schedules, and cost factors. The SCM allows customization of the data for detailed site-specific estimates. There are approximately forty TSD module designs that have been further customized to account for design differences for nonalpha, alpha, remote-handled, and transuranic wastes. The SCM generates cost profiles based on the model default parameters or customized user-defined input and also generates costs for transporting waste from generators to TSD sites.

  4. T2LBM Version 1.0: Landfill bioreactor model for TOUGH2

    Energy Technology Data Exchange (ETDEWEB)

    Oldenburg, Curtis M.

    2001-05-22

    The need to control gas and leachate production and minimize refuse volume in landfills has motivated the development of landfill simulation models that can be used by operators to predict and design optimal treatment processes. T2LBM is a module for the TOUGH2 simulator that implements a Landfill Bioreactor Model to provide simulation capability for the processes of aerobic or anaerobic biodegradation of municipal solid waste and the associated flow and transport of gas and liquid through the refuse mass. T2LBM incorporates a Monod kinetic rate law for the biodegradation of acetic acid in the aqueous phase by either aerobic or anaerobic microbes as controlled by the local oxygen concentration. Acetic acid is considered a proxy for all biodegradable substrates in the refuse. Aerobic and anaerobic microbes are assumed to be immobile and not limited by nutrients in their growth. Methane and carbon dioxide generation due to biodegradation with corresponding thermal effects are modeled. The numerous parameters needed to specify biodegradation are input by the user in the SELEC block of the TOUGH2 input file. Test problems show that good matches to laboratory experiments of biodegradation can be obtained. A landfill test problem demonstrates the capabilities of T2LBM for a hypothetical two-dimensional landfill scenario with permeability heterogeneity and compaction.

  5. Regional groundwater flow model for a glaciation scenario. Simpevarp subarea - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Jaquet, O.; Siegel, P. [Colenco Power Engineering Ltd, Baden-Daettwil (Switzerland)

    2006-10-15

    A groundwater flow model (glaciation model) was developed at a regional scale in order to study long term transient effects related to a glaciation scenario likely to occur in response to climatic changes. Conceptually the glaciation model was based on the regional model of Simpevarp and was then extended to a mega-regional scale (of several hundred kilometres) in order to account for the effects of the ice sheet. These effects were modelled using transient boundary conditions provided by a dynamic ice sheet model describing the phases of glacial build-up, glacial completeness and glacial retreat needed for the glaciation scenario. The results demonstrate the strong impact of the ice sheet on the flow field, in particular during the phases of the build-up and the retreat of the ice sheet. These phases last for several thousand years and may cause large amounts of melt water to reach the level of the repository and below. The highest fluxes of melt water are located in the vicinity of the ice margin. As the ice sheet approaches the repository location, the advective effects gain dominance over diffusive effects in the flow field. In particular, up-coning effects are likely to occur at the margin of the ice sheet leading to potential increases in salinity at repository level. For the base case, the entire salinity field of the model is almost completely flushed out at the end of the glaciation period. The flow patterns are strongly governed by the location of the conductive features in the subglacial layer. The influence of these glacial features is essential for the salinity distribution as is their impact on the flow trajectories and, therefore, on the resulting performance measures. Travel times and F-factor were calculated using the method of particle tracking. Glacial effects cause major consequences on the results. In particular, average travel times from the repository to the surface are below 10 a during phases of glacial build-up and retreat. In comparison

  6. Hybrid Coordinate Ocean Model (HYCOM) Version 2.1. User’s Guide

    Science.gov (United States)

    2003-01-01

    path. The path and possibly the machinetype definition may need modifying for the user’s particular setup. The Gnuplot plot package is also used by...resulting plain text barotropic velocity profiles can be plotted by many graphics packages, including gnuplot . 18.1.2 TRANSPORT The program TRANSPORT is...and possibly the machinetype definition may need modifing for your particular setup. The gnuplot plot package is also used by hycom sigma and its

  7. People Capability Maturity Model (P-CMM) Version 2.0, Second Edition

    Science.gov (United States)

    2009-07-01

    an increase in the number of millennials or Generation Y employees seeking greater work/life balance, and as organizations struggle to retain their...rate of salary or hourly wages provided to individuals, plus any variable amounts that are provided based on an existing agreement between the...vehicles for providing compensation include the following: • Salary or hourly wages • Piece rate pay or incentives • Incentive pay (e.g., commissions or

  8. Validation of the French version of the marijuana craving questionnaire (MCQ) generates a two-factor model.

    Science.gov (United States)

    Chauchard, Emeline; Goutaudier, Nelly; Heishman, Stephen J; Gorelick, David A; Chabrol, Henri

    2015-01-01

    Craving is a major issue in drug addiction, and a target for drug treatment. The Marijuana Craving Questionnaire-Short Form (MCQ-SF) is a useful tool for assessing cannabis craving in clinical and research settings. To validate the French version of the MCQ-SF (FMCQ-SF). Young adult cannabis users not seeking treatment (n = 679) completed the FMCQ-SF and questionnaires assessing their frequency of cannabis use and craving, cannabis use disorder criteria, and alcohol use. Confirmatory factor analysis of the four-factor FMCQ-SF model did not fit the data well. Exploratory factor analysis suggested a two-factor solution ("pleasure", characterized by planning and expectation of positive effects, and "release of tension", characterized by relief from anxiety, nervousness, or tension) with good psychometric properties. This two-factor model showed good internal and convergent validity and correlated with cannabis abuse and dependence and with frequency of cannabis use and craving. Validation of the FMCQ-SF generated a two-factor model, different from the four-factor solution generated in English language studies. Considering that craving plays an important role in withdrawal and relapse, this questionnaire should be useful for French-language addiction professionals.

  9. Presentation, calibration and validation of the low-order, DCESS Earth System Model (Version 1

    Directory of Open Access Journals (Sweden)

    J. O. Pepke Pedersen

    2008-11-01

    Full Text Available A new, low-order Earth System Model is described, calibrated and tested against Earth system data. The model features modules for the atmosphere, ocean, ocean sediment, land biosphere and lithosphere and has been designed to simulate global change on time scales of years to millions of years. The atmosphere module considers radiation balance, meridional transport of heat and water vapor between low-mid latitude and high latitude zones, heat and gas exchange with the ocean and sea ice and snow cover. Gases considered are carbon dioxide and methane for all three carbon isotopes, nitrous oxide and oxygen. The ocean module has 100 m vertical resolution, carbonate chemistry and prescribed circulation and mixing. Ocean biogeochemical tracers are phosphate, dissolved oxygen, dissolved inorganic carbon for all three carbon isotopes and alkalinity. Biogenic production of particulate organic matter in the ocean surface layer depends on phosphate availability but with lower efficiency in the high latitude zone, as determined by model fit to ocean data. The calcite to organic carbon rain ratio depends on surface layer temperature. The semi-analytical, ocean sediment module considers calcium carbonate dissolution and oxic and anoxic organic matter remineralisation. The sediment is composed of calcite, non-calcite mineral and reactive organic matter. Sediment porosity profiles are related to sediment composition and a bioturbated layer of 0.1 m thickness is assumed. A sediment segment is ascribed to each ocean layer and segment area stems from observed ocean depth distributions. Sediment burial is calculated from sedimentation velocities at the base of the bioturbated layer. Bioturbation rates and oxic and anoxic remineralisation rates depend on organic carbon rain rates and dissolved oxygen concentrations. The land biosphere module considers leaves, wood, litter and soil. Net primary production depends on atmospheric carbon dioxide concentration and

  10. Feynman propagator for the planar version of the CPT-even electrodynamics of Standard Model Extension

    Energy Technology Data Exchange (ETDEWEB)

    Casana, Rodolfo; Ferreira Junior, Manoel M.; Moreira, Roemir P.M. [Universidade Federal do Maranhao (UFMA), MA (Brazil); Gomes, Adalto R. [Instituto Federal de Educacao Ciencia e Tecnologia do Maranhao (IFMA), MA (Brazil)

    2011-07-01

    Full text: In a recent work, we have accomplished the dimensional reduction of the non birefringent CPT-even gauge sector of the Standard Model Extension. As well-known, the CPT-even gauge sector is composed of nineteen components comprised by the fourth-rank tensor, (K{sub F} ){sub μνρσ}, of which nine do not yield birefringence. These nine components can be parametrized in terms of the symmetric and traceless tensor, k{sub μν} = (K{sub F}){sup ρ} νρσ. Starting from this parametrization, and applying the dimensional reduction procedure, we obtain a planar theory corresponding to the non birefringent sector, composed of a gauge and scalar sectors, mutually coupled. These sectors possess six and three independent components, respectively. Some interesting properties of this theory, concerning classical stationary solutions, were examined recently. In the present work, we explicitly evaluate the Feynman propagator for this model, in a tensor closed way, using a set of operators defined in terms of three 3-vectors. We use this propagator to examine the dispersion relations of this theory, and analyze some properties related to its causality, stability, and unitarity. (author)

  11. Mathematical and numerical model of directional solidification including initial and terminal transients of the process

    Directory of Open Access Journals (Sweden)

    W. Kapturkiewicz

    2008-12-01

    Full Text Available The, developed in this study, simple model and numerical solution of diffusion growth of the solid phase under the conditions of directional solidification allow for the effect of constituent diffusion in both liquid and solid phase and assume the process run in which (like in reality the preset parameter is the velocity of sample (pulling velocity at a preset temperature gradient. The solid/liquid interface velocity is not the process parameter (like it is in numerous other solutions proposed so far but a function of this process. The effect of convection outside the diffusion layer has been included in mass balance under the assumption that in the zone of convection the mixing is complete. The above assumptions enabled solving the kinetics of growth of the solid phase (along with the diffusion field in solid and liquid phase under the conditions of diffusion well reflecting the process run starting with the initial transient state, going through the steady state period in central part of the casting, and ending in a terminal transient state. In the numerical solution obtained by the finite difference method with variable grid dimensions, the error of the mass control balance over the whole process range was 1 - 2 %.

  12. Unitary version of the single-particle dispersive optical model and single-hole excitations in medium-heavy spherical nuclei

    Science.gov (United States)

    Kolomiytsev, G. V.; Igashov, S. Yu.; Urin, M. H.

    2017-07-01

    A unitary version of the single-particle dispersive optical model was proposed with the aim of applying it to describing high-energy single-hole excitations in medium-heavy mass nuclei. By considering the example of experimentally studied single-hole excitations in the 90Zr and 208Pb parent nuclei, the contribution of the fragmentation effect to the real part of the optical-model potential was estimated quantitatively in the framework of this version. The results obtained in this way were used to predict the properties of such excitations in the 132Sn parent nucleus.

  13. Midlatitude atmospheric responses to Arctic sensible heat flux anomalies in Community Climate Model, Version 4

    Science.gov (United States)

    Mills, Catrin M.; Cassano, John J.; Cassano, Elizabeth N.

    2016-12-01

    Possible linkages between Arctic sea ice loss and midlatitude weather are strongly debated in the literature. We analyze a coupled model simulation to assess the possibility of Arctic ice variability forcing a midlatitude response, ensuring consistency between atmosphere, ocean, and ice components. We work with weekly running mean daily sensible heat fluxes with the self-organizing map technique to identify Arctic sensible heat flux anomaly patterns and the associated atmospheric response, without the need of metrics to define the Arctic forcing or measure the midlatitude response. We find that low-level warm anomalies during autumn can build planetary wave patterns that propagate downstream into the midlatitudes, creating robust surface cold anomalies in the eastern United States.

  14. Programs OPTMAN and SHEMMAN version 5 (1998). Coupled channels optical model and collective nuclear structure calculation

    Energy Technology Data Exchange (ETDEWEB)

    Sukhovitskii, E.Sh.; Porodzinskii, Y.V.; Iwamoto, Osamu; Chiba, Satoshi; Shibata, Keiichi [Japan Atomic Energy Research Inst., Tokai, Ibaraki (Japan). Tokai Research Establishment

    1998-05-01

    Program OPTMAN has been developed to be a tool for optical model calculations and employed in nuclear data evaluation at Radiation Physics and Chemistry Problems Institute. The code had been continuously improved to incorporate a number of options for more than twenty years. For the last three years it was successfully applied for evaluation of minor actinides nuclear data for a contract with International Science and Technology Center with Japan as the financing party. This code is now installed on the PC and UNIX work station by the authors at Nuclear Data Center of JAERI as well as program SHEMMAN which is used for the determination of nuclear Hamiltonian parameters. This report is intended as a brief manual of these codes for the users at JAERI. (author)

  15. Offshore Wind Guidance Document: Oceanography and Sediment Stability (Version 1) Development of a Conceptual Site Model.

    Energy Technology Data Exchange (ETDEWEB)

    Roberts, Jesse D.; Jason Magalen; Craig Jones

    2014-06-01

    This guidance document provide s the reader with an overview of the key environmental considerations for a typical offshore wind coastal location and the tools to help guide the reader through a thoro ugh planning process. It will enable readers to identify the key coastal processes relevant to their offshore wind site and perform pertinent analysis to guide siting and layout design, with the goal of minimizing costs associated with planning, permitting , and long - ter m maintenance. The document highlight s site characterization and assessment techniques for evaluating spatial patterns of sediment dynamics in the vicinity of a wind farm under typical, extreme, and storm conditions. Finally, the document des cribe s the assimilation of all of this information into the conceptual site model (CSM) to aid the decision - making processes.

  16. Evaluating water management strategies with the Systems Impact Assessment Model: SIAM version 4

    Science.gov (United States)

    Bartholow, John M.; Heasley, John; Hanna, Blair; Sandelin, Jeff; Flug, Marshall; Campbell, Sharon; Henriksen, Jim; Douglas, Aaron

    2005-01-01

    Water from many of California's coastal rivers has been used for a wide variety of development ventures, including major agricultural diversions, hydropower generation, and contaminant assimilation from industry, agriculture and logging. Anthropogenic impacts often degrade water quality and decrease the quantity and quality of aquatic habitat. Reallocating streamflow away from uses that degrade water quality to uses that foster higher water quality is a critical step in restoring riverine habitat and the anadromous fish that rely on that habitat for a portion of their life cycle. Reallocation always brings with it the need to examine the economic efficiency of the proposed changes. If the dollar benefits of improving water quality are greater than the costs, the criterion of improving economic efficiency is satisfied, a fact that can be highly persuasive to decision makers contemplating reallocation.

  17. Modelling anaerobic digestion in an industrial biogas digester: Application of lactate-including ADM1 model (Part II).

    Science.gov (United States)

    Satpathy, Preseela; Biernacki, Piotr; Cypionka, Heribert; Steinigeweg, Sven

    2016-12-05

    A modified Anaerobic Digestion Model No. 1 (ADM1xp) including lactate was applied to a full-scale biogas plant. This model considers monosaccharides to degrade through lactic acid, which further degrades majorly into acetate followed by propionate and butyrate. Experimental data were derived from the previous works in the same laboratory, and the proposed parameters were validated against batch experiments. After successful validation, the biogas plant bearing a fermenter size of 7 dam(3) and operated with food waste and cattle manure was simulated. The biogas production and methane content were reliably simulated, and a good fit could be obtained against the experimental data with an average difference of less than 1%. When compared to the original ADM1 model, the performance of the lactate-incorporated model was found to be improved. Inclusion of lactate as a parameter in the ADM1xp model is recommended for an increased sensitivity and enhanced prediction principally for systems dealing with high carbohydrate and lactate loads.

  18. Numerical modelling of seawater intrusion in Shenzhen (China) using a 3D densitydependent model including tidal effects

    Indian Academy of Sciences (India)

    Wei Lu; Qingchun Yang; Jordi D Martín; Ricardo Juncosa

    2013-04-01

    During the 1990s, groundwater overexploitation has resulted in seawater intrusion in the coastal aquifer of the Shenzhen city, China. Although water supply facilities have been improved and alleviated seawater intrusion in recent years, groundwater overexploitation is still of great concern in some local areas. In this work we present a three-dimensional density-dependent numerical model developed with the FEFLOW code, which is aimed at simulating the extent of seawater intrusion while including tidal effects and different groundwater pumping scenarios. Model calibration, using waterheads and reported chloride concentration, has been performed based on the data from 14 boreholes, which were monitored from May 2008 to December 2009. A fairly good fitness between the observed and computed values was obtained by a manual trial-and-error method. Model prediction has been carried out forward 3 years with the calibrated model taking into account high, medium and low tide levels and different groundwater exploitation schemes. The model results show that tide-induced seawater intrusion significantly affects the groundwater levels and concentrations near the estuarine of the Dasha river, which implies that an important hydraulic connection exists between this river and groundwater, even considering that some anti-seepage measures were taken in the river bed. Two pumping scenarios were considered in the calibrated model in order to predict the future changes in the water levels and chloride concentration. The numerical results reveal a decreased tendency of seawater intrusion if groundwater exploitation does not reach an upper bound of about 1.32 × 104 m3/d. The model results provide also insights for controlling seawater intrusion in such coastal aquifer systems.

  19. Sensitivity of precipitation to parameter values in the community atmosphere model version 5

    Energy Technology Data Exchange (ETDEWEB)

    Johannesson, Gardar; Lucas, Donald; Qian, Yun; Swiler, Laura Painton; Wildey, Timothy Michael

    2014-03-01

    One objective of the Climate Science for a Sustainable Energy Future (CSSEF) program is to develop the capability to thoroughly test and understand the uncertainties in the overall climate model and its components as they are being developed. The focus on uncertainties involves sensitivity analysis: the capability to determine which input parameters have a major influence on the output responses of interest. This report presents some initial sensitivity analysis results performed by Lawrence Livermore National Laboratory (LNNL), Sandia National Laboratories (SNL), and Pacific Northwest National Laboratory (PNNL). In the 2011-2012 timeframe, these laboratories worked in collaboration to perform sensitivity analyses of a set of CAM5, 2° runs, where the response metrics of interest were precipitation metrics. The three labs performed their sensitivity analysis (SA) studies separately and then compared results. Overall, the results were quite consistent with each other although the methods used were different. This exercise provided a robustness check of the global sensitivity analysis metrics and identified some strongly influential parameters.

  20. The new version of the Institute of Numerical Mathematics Sigma Ocean Model (INMSOM) for simulation of Global Ocean circulation and its variability

    Science.gov (United States)

    Gusev, Anatoly; Fomin, Vladimir; Diansky, Nikolay; Korshenko, Evgeniya

    2017-04-01

    In this paper, we present the improved version of the ocean general circulation sigma-model developed in the Institute of Numerical Mathematics of the Russian Academy of Sciences (INM RAS). The previous version referred to as INMOM (Institute of Numerical Mathematics Ocean Model) is used as the oceanic component of the IPCC climate system model INMCM (Institute of Numerical Mathematics Climate Model (Volodin et al 2010,2013). Besides, INMOM as the only sigma-model was used for simulations according to CORE-II scenario (Danabasoglu et al. 2014,2016; Downes et al. 2015; Farneti et al. 2015). In general, INMOM results are comparable to ones of other OGCMs and were used for investigation of climatic variations in the North Atlantic (Gusev and Diansky 2014). However, detailed analysis of some CORE-II INMOM results revealed some disadvantages of the INMOM leading to considerable errors in reproducing some ocean characteristics. So, the mass transport in the Antarctic Circumpolar Current (ACC) was overestimated. As well, there were noticeable errors in reproducing thermohaline structure of the ocean. After analysing the previous results, the new version of the OGCM was developed. It was decided to entitle is INMSOM (Institute of Numerical Mathematics Sigma Ocean Model). The new title allows one to distingwish the new model, first, from its older version, and second, from another z-model developed in the INM RAS and referred to as INMIO (Institute of Numerical Mathematics and Institute of Oceanology ocean model) (Ushakov et al. 2016). There were numerous modifications in the model, some of them are as follows. 1) Formulation of the ocean circulation problem in terms of full free surface with taking into account water amount variation. 2) Using tensor form of lateral viscosity operator invariant to rotation. 3) Using isopycnal diffusion including Gent-McWilliams mixing. 4) Using atmospheric forcing computation according to NCAR methodology (Large and Yeager 2009). 5

  1. Variational assimilation of land surface temperature within the ORCHIDEE Land Surface Model Version 1.2.6

    Science.gov (United States)

    Benavides Pinjosovsky, Hector Simon; Thiria, Sylvie; Ottlé, Catherine; Brajard, Julien; Badran, Fouad; Maugis, Pascal

    2017-01-01

    The SECHIBA module of the ORCHIDEE land surface model describes the exchanges of water and energy between the surface and the atmosphere. In the present paper, the adjoint semi-generator software called YAO was used as a framework to implement a 4D-VAR assimilation scheme of observations in SECHIBA. The objective was to deliver the adjoint model of SECHIBA (SECHIBA-YAO) obtained with YAO to provide an opportunity for scientists and end users to perform their own assimilation. SECHIBA-YAO allows the control of the 11 most influential internal parameters of the soil water content, by observing the land surface temperature or remote sensing data such as the brightness temperature. The paper presents the fundamental principles of the 4D-VAR assimilation, the semi-generator software YAO and a large number of experiments showing the accuracy of the adjoint code in different conditions (sites, PFTs, seasons). In addition, a distributed version is available in the case for which only the land surface temperature is observed.

  2. ETM documentation update – including modelling conventions and manual for software tools

    DEFF Research Database (Denmark)

    Grohnheit, Poul Erik

    , it summarises the work done during 2013, and it also contains presentations for promotion of fusion as a future element in the electricity generation mix and presentations for the modelling community concerning model development and model documentation – in particular for TIAM collaboration workshops....

  3. Modelling stress-dependent permeability in fractured rock including effects of propagating and bending fractures

    NARCIS (Netherlands)

    Latham, J.P.; Xiang, J.; Belayneh, M.; Nick, H.M.; Tsang, C.F.; Blunt, M.J.

    2013-01-01

    The influence of in-situ stresses on flow processes in fractured rock is investigated using a novel modelling approach. The combined finite-discrete element method (FEMDEM) is used to model the deformation of a fractured rock mass. The fracture wall displacements and aperture changes are modelled in

  4. A sub-circuit MOSFET model with a wide temperature range including cryogenic temperature*

    Institute of Scientific and Technical Information of China (English)

    Jia Kan; Sun Weifeng; Shi Longxing

    2011-01-01

    A sub-circuit SPICE model ofa MOSFET for low temperature operation is presented. Two resistors are introduced for the freeze-out effect, and the explicit behavioral models are developed for them. The model can be used in a wide temperature range covering both cryogenic temperature and regular temperatures.

  5. Including Overweight or Obese Students in Physical Education: A Social Ecological Constraint Model

    Science.gov (United States)

    Li, Weidong; Rukavina, Paul

    2012-01-01

    In this review, we propose a social ecological constraint model to study inclusion of overweight or obese students in physical education by integrating key concepts and assumptions from ecological constraint theory in motor development and social ecological models in health promotion and behavior. The social ecological constraint model proposes…

  6. Fuel Cell Power Model Version 2: Startup Guide, System Designs, and Case Studies. Modeling Electricity, Heat, and Hydrogen Generation from Fuel Cell-Based Distributed Energy Systems

    Energy Technology Data Exchange (ETDEWEB)

    Steward, D.; Penev, M.; Saur, G.; Becker, W.; Zuboy, J.

    2013-06-01

    This guide helps users get started with the U.S. Department of Energy/National Renewable Energy Laboratory Fuel Cell Power (FCPower) Model Version 2, which is a Microsoft Excel workbook that analyzes the technical and economic aspects of high-temperature fuel cell-based distributed energy systems with the aim of providing consistent, transparent, comparable results. This type of energy system would provide onsite-generated heat and electricity to large end users such as hospitals and office complexes. The hydrogen produced could be used for fueling vehicles or stored for later conversion to electricity.

  7. User Manual for Graphical User Interface Version 2.10 with Fire and Smoke Simulation Model (FSSIM) Version 1.2

    Science.gov (United States)

    2010-05-10

    calculations, while fast, have limitations in applicability and large uncertainties in their results. CFD computations have the potential to be accurate...variables or a CFD model that uses a multitude of variables. A network representation allows for maximum physical extent of a simulation with a minimum...are separated; therefore, the floor of the upper deck and the ceiling of the lower d eck are highlighted. A vertical surf ace would only appear as a

  8. Evaluating litter decomposition in earth system models with long-term litterbag experiments: an example using the Community Land Model version 4 (CLM4).

    Science.gov (United States)

    Bonan, Gordon B; Hartman, Melannie D; Parton, William J; Wieder, William R

    2013-03-01

    Decomposition is a large term in the global carbon budget, but models of the earth system that simulate carbon cycle-climate feedbacks are largely untested with respect to litter decomposition. We tested the litter decomposition parameterization of the community land model version 4 (CLM4), the terrestrial component of the community earth system model, with data from the long-term intersite decomposition experiment team (LIDET). The LIDET dataset is a 10-year study of litter decomposition at multiple sites across North America and Central America. We performed 10-year litter decomposition simulations comparable with LIDET for 9 litter types and 20 sites in tundra, grassland, and boreal, conifer, deciduous, and tropical forest biomes using the LIDET-provided climatic decomposition index to constrain temperature and moisture effects on decomposition. We performed additional simulations with DAYCENT, a version of the CENTURY model, to ask how well an established ecosystem model matches the observations. The results show large discrepancy between the laboratory microcosm studies used to parameterize the CLM4 litter decomposition and the LIDET field study. Simulated carbon loss is more rapid than the observations across all sites, and nitrogen immobilization is biased high. Closer agreement with the observations requires much lower decomposition rates, obtained with the assumption that soil mineral nitrogen severely limits decomposition. DAYCENT better replicates the observations, for both carbon mass remaining and nitrogen, independent of nitrogen limitation. CLM4 has low soil carbon in global earth system simulations. These results suggest that this bias arises, in part, from too rapid litter decomposition. More broadly, the terrestrial biogeochemistry of earth system models must be critically tested with observations, and the consequences of particular model choices must be documented. Long-term litter decomposition experiments such as LIDET provide a real

  9. A methodology for including wall roughness effects in k-ε low-Reynolds turbulence models

    Energy Technology Data Exchange (ETDEWEB)

    Ambrosini, W., E-mail: walter.ambrosini@ing.unipi.it; Pucciarelli, A.; Borroni, I.

    2015-05-15

    Highlights: • A model for taking into account wall roughness in low-Reynolds k-ε models is presented. • The model is subjected to a first validation to show its potential in general applications. • The application of the model in predicting heat transfer to supercritical fluids is also discussed. - Abstract: A model accounting for wall roughness effects in k-ε low-Reynolds turbulence models is described in the present paper. In particular, the introduction in the transport equations of k and ε of additional source terms related to roughness, based on simple assumptions and dimensional relationships, is proposed. An objective of the present paper, in addition to obtaining more realistic predictions of wall friction, is the application of the proposed model to the study of heat transfer to supercritical fluids. A first validation of the model is reported. The model shows the capability of predicting, at least qualitatively, some of the most important trends observed when dealing with rough pipes in very different flow conditions. Qualitative comparisons with some DNS data available in literature are also performed. Further analyses provided promising results concerning the ability of the model in reproducing the trend of friction factor when varying the flow conditions, though improvements are necessary for achieving better quantitative accuracy. First applications of the model in simulating heat transfer to supercritical fluids are also described, showing the capability of the model to affect the predictions of these heat transfer phenomena, in particular in the vicinity of the pseudo-critical conditions. A more extended application of the model to relevant deteriorated heat transfer conditions will clarify the usefulness of this modelling methodology in improving predictions of these difficult phenomena. Whatever the possible success in this particular application that motivated its development, this approach suggests a general methodology for accounting

  10. Cielo Computational Environment Usage Model With Mappings to ACE Requirements for the General Availability User Environment Capabilities Release Version 1.1

    Energy Technology Data Exchange (ETDEWEB)

    Vigil,Benny Manuel [Los Alamos National Laboratory; Ballance, Robert [SNL; Haskell, Karen [SNL

    2012-08-09

    Cielo is a massively parallel supercomputer funded by the DOE/NNSA Advanced Simulation and Computing (ASC) program, and operated by the Alliance for Computing at Extreme Scale (ACES), a partnership between Los Alamos National Laboratory (LANL) and Sandia National Laboratories (SNL). The primary Cielo compute platform is physically located at Los Alamos National Laboratory. This Cielo Computational Environment Usage Model documents the capabilities and the environment to be provided for the Q1 FY12 Level 2 Cielo Capability Computing (CCC) Platform Production Readiness Milestone. This document describes specific capabilities, tools, and procedures to support both local and remote users. The model is focused on the needs of the ASC user working in the secure computing environments at Lawrence Livermore National Laboratory (LLNL), Los Alamos National Laboratory, or Sandia National Laboratories, but also addresses the needs of users working in the unclassified environment. The Cielo Computational Environment Usage Model maps the provided capabilities to the tri-Lab ASC Computing Environment (ACE) Version 8.0 requirements. The ACE requirements reflect the high performance computing requirements for the Production Readiness Milestone user environment capabilities of the ASC community. A description of ACE requirements met, and those requirements that are not met, are included in each section of this document. The Cielo Computing Environment, along with the ACE mappings, has been issued and reviewed throughout the tri-Lab community.

  11. ADVANCED UTILITY SIMULATION MODEL, REPORT OF SENSITIVITY TESTING, CALIBRATION, AND MODEL OUTPUT COMPARISONS (VERSION 3.0)

    Science.gov (United States)

    The report gives results of activities relating to the Advanced Utility Simulation Model (AUSM): sensitivity testing. comparison with a mature electric utility model, and calibration to historical emissions. The activities were aimed at demonstrating AUSM's validity over input va...

  12. Influence of Solar and Thermal Radiation on Future Heat Stress Using CMIP5 Archive Driving the Community Land Model Version 4.5

    Science.gov (United States)

    Buzan, J. R.; Huber, M.

    2015-12-01

    The summer of 2015 has experienced major heat waves on 4 continents, and heat stress left ~4000 people dead in India and Pakistan. Heat stress is caused by a combination of meteorological factors: temperature, humidity, and radiation. The International Organization for Standardization (ISO) uses Wet Bulb Globe Temperature (WBGT)—an empirical metric this is calibrated with temperature, humidity, and radiation—for determining labor capacity during heat stress. Unfortunately, most literature studying global heat stress focuses on extreme temperature events, and a limited number of studies use the combination of temperature and humidity. Recent global assessments use WBGT, yet omit the radiation component without recalibrating the metric.Here we explicitly calculate future WBGT within a land surface model, including radiative fluxes as produced by a modeled globe thermometer. We use the Community Land Model version 4.5 (CLM4.5), which is a component model of the Community Earth System Model (CESM), and is maintained by the National Center for Atmospheric Research (NCAR). To drive our CLM4.5 simulations, we use greenhouse gasses Representative Concentration Pathway 8.5 (business as usual), and atmospheric output from the CMIP5 Archive. Humans work in a variety of environments, and we place the modeled globe thermometer in a variety of environments. We modify CLM4.5 code to calculate solar and thermal radiation fluxes below and above canopy vegetation, and in bare ground. To calculate wet bulb temperature, we implemented the HumanIndexMod into CLM4.5. The temperature, wet bulb temperature, and radiation fields are calculated at every model time step and are outputted 4x Daily. We use these fields to calculate WBGT and labor capacity for two time slices: 2026-2045 and 2081-2100.

  13. Two methods for modeling vibrations of planetary gearboxes including faults: Comparison and validation

    Science.gov (United States)

    Parra, J.; Vicuña, Cristián Molina

    2017-08-01

    Planetary gearboxes are important components of many industrial applications. Vibration analysis can increase their lifetime and prevent expensive repair and safety concerns. However, an effective analysis is only possible if the vibration features of planetary gearboxes are properly understood. In this paper, models are used to study the frequency content of planetary gearbox vibrations under non-fault and different fault conditions. Two different models are considered: phenomenological model, which is an analytical-mathematical formulation based on observation, and lumped-parameter model, which is based on the solution of the equations of motion of the system. Results of both models are not directly comparable, because the phenomenological model provides the vibration on a fixed radial direction, such as the measurements of the vibration sensor mounted on the outer part of the ring gear. On the other hand, the lumped-parameter model provides the vibrations on the basis of a rotating reference frame fixed to the carrier. To overcome this situation, a function to decompose the lumped-parameter model solutions to a fixed reference frame is presented. Finally, comparisons of results from both model perspectives and experimental measurements are presented.

  14. A two-dimensional simulation model of phosphorus uptake including crop growth and P-response

    NARCIS (Netherlands)

    Mollier, A.; Willigen, de P.; Heinen, M.; Morel, C.; Schneider, A.; Pellerin, S.

    2008-01-01

    Modelling nutrient uptake by crops implies considering and integrating the processes controlling the soil nutrient supply, the uptake by the root system and relationships between the crop growth response and the amount of nutrient absorbed. We developed a model that integrates both dynamics of maize

  15. European column buckling curves and finite element modelling including high strength steels

    DEFF Research Database (Denmark)

    Jönsson, Jeppe; Stan, Tudor-Cristian

    2017-01-01

    Eurocode allows for finite element modelling of plated steel structures, however the information in the code on how to perform the analysis or what assumptions to make is quite sparse. The present paper investigates the deterministic modelling of flexural column buckling using plane shell element...

  16. Dipole model analysis of highest precision HERA data, including very low $Q^2$'s

    CERN Document Server

    Luszczak, Agnieszka

    2016-01-01

    We analyse, within a dipole model, the final, inclusive HERA DIS cross section data in the low $x$ region, using fully correlated errors. We show, that these highest precision data are very well described within the dipole model framework starting from $Q^2$ values of 3.5 GeV$^2$ to the highest values of $Q^2 =$ 250 GeV$^2$.

  17. A Two-Account Life Insurance Model for Scenario-Based Valuation Including Event Risk

    DEFF Research Database (Denmark)

    Jensen, Ninna Reitzel; Schomacker, Kristian Juul

    2015-01-01

    Using a two-account model with event risk, we model life insurance contracts taking into account both guaranteed and non-guaranteed payments in participating life insurance as well as in unit-linked insurance. Here, event risk is used as a generic term for life insurance events, such as death......, disability, etc. In our treatment of participating life insurance, we have special focus on the bonus schemes “consolidation” and “additional benefits”, and one goal is to formalize how these work and interact. Another goal is to describe similarities and differences between participating life insurance...... model by conducting scenario analysis based on Monte Carlo simulation, but the model applies to scenarios in general and to worst-case and best-estimate scenarios in particular. In addition to easy computations, our model offers a common framework for the valuation of life insurance payments across...

  18. A Two-Account Life Insurance Model for Scenario-Based Valuation Including Event Risk

    DEFF Research Database (Denmark)

    Jensen, Ninna Reitzel; Schomacker, Kristian Juul

    2015-01-01

    and unit-linked insurance. By use of a two-account model, we are able to illustrate general concepts without making the model too abstract. To allow for complicated financial markets without dramatically increasing the mathematical complexity, we focus on economic scenarios. We illustrate the use of our......Using a two-account model with event risk, we model life insurance contracts taking into account both guaranteed and non-guaranteed payments in participating life insurance as well as in unit-linked insurance. Here, event risk is used as a generic term for life insurance events, such as death...... product types. This enables comparison of participating life insurance products and unit-linked insurance products, thus building a bridge between the two different ways of formalizing life insurance products. Finally, our model distinguishes itself from the existing literature by taking into account...

  19. Gasification of biomass in a fixed bed downdraft gasifier--a realistic model including tar.

    Science.gov (United States)

    Barman, Niladri Sekhar; Ghosh, Sudip; De, Sudipta

    2012-03-01

    This study presents a model for fixed bed downdraft biomass gasifiers considering tar also as one of the gasification products. A representative tar composition along with its mole fractions, as available in the literature was used as an input parameter within the model. The study used an equilibrium approach for the applicable gasification reactions and also considered possible deviations from equilibrium to further upgrade the equilibrium model to validate a range of reported experimental results. Heat balance was applied to predict the gasification temperature and the predicted values were compared with reported results in literature. A comparative study was made with some reference models available in the literature and also with experimental results reported in the literature. Finally a predicted variation of performance of the gasifier by this validated model for different air-fuel ratio and moisture content was also discussed.

  20. Including Tropical Croplands in a Terrestrial Biosphere Model: Application to West Africa

    Science.gov (United States)

    Berg, A.; Sultan, B.; de Noblet, N.

    2008-12-01

    Studying the large-scale relationships between climate and agriculture raises two different issues: the impact of climate on crops, and the potential feedbacks to climate from croplands. A relevant framework to consistently address this twofold issue is to extend existing Dynamic Global Vegetation Models, which can be coupled to climate models, in order to explicitly account for croplands. Here we present the first results of such a strategy applied to tropical croplands over West Africa. We introduce directly into the terrestrial biosphere model ORCHIDEE (IPSL) adequate processes and parametrizations taken from the crop model SARRAH (CIRAD), which is calibrated for millet over this region. The resulting model, ORCH-mil, realistically simulates the growth and yield of millet when tested on an experimental station in Senegal. The model is then applied over West Africa using a 36-year climate reanalysis dataset. First the model is tested in terms of yield simulation, against national millet yields from the FAO database. The ability of the model to reproduce the spatial and temporal variability of millet yields is assessed. Then, the effects on land surface fluxes of explicitly accounting for croplands are examined, by comparison between ORCH-mil and ORCHIDEE. These first simulations show consistent results, but underline the need for some further development and validation of the model if it is to simulate yields accurately. In terms of land surface fluxes, significant differences between ORCH-mil and ORCHIDEE appear, mainly via changes in evaporation and albedo. The potential impact on the west African monsoon system of such differences needs to be investigated by coupling ORCH-mil to a climate model: first results from such an experiment will be presented.

  1. Spatial modelling of marine organisms in Forsmark and Oskarshamn. Including calculation of physical predictor variables

    Energy Technology Data Exchange (ETDEWEB)

    Carlen, Ida; Nikolopoulos, Anna; Isaeus, Martin (AquaBiota Water Research, Stockholm (SE))

    2007-06-15

    GIS grids (maps) of marine parameters were created using point data from previous site investigations in the Forsmark and Oskarshamn areas. The proportion of global radiation reaching the sea bottom in Forsmark and Oskarshamn was calculated in ArcView, using Secchi depth measurements and the digital elevation models for the respective area. The number of days per year when the incoming light exceeds 5 MJ/m2 at the bottom was then calculated using the result of the previous calculations together with measured global radiation. Existing modelled grid-point data on bottom and pelagic temperature for Forsmark were interpolated to create surface covering grids. Bottom and pelagic temperature grids for Oskarshamn were calculated using point measurements to achieve yearly averages for a few points and then using regressions with existing grids to create new maps. Phytoplankton primary production in Forsmark was calculated using point measurements of chlorophyll and irradiance, and a regression with a modelled grid of Secchi depth. Distribution of biomass of macrophyte communities in Forsmark and Oskarshamn was calculated using spatial modelling in GRASP, based on field data from previous surveys. Physical parameters such as those described above were used as predictor variables. Distribution of biomass of different functional groups of fish in Forsmark was calculated using spatial modelling based on previous surveys and with predictor variables such as physical parameters and results from macrophyte modelling. All results are presented as maps in the report. The quality of the modelled predictions varies as a consequence of the quality and amount of the input data, the ecology and knowledge of the predicted phenomena, and by the modelling technique used. A substantial part of the variation is not described by the models, which should be expected for biological modelling. Therefore, the resulting grids should be used with caution and with this uncertainty kept in mind. All

  2. Study of the Eco-Economic Indicators by Means of the New Version of the Merge Integrated Model. Part 1

    Directory of Open Access Journals (Sweden)

    Boris Vadimovich Digas

    2015-12-01

    Full Text Available One of the most relevant issues of the day is the forecasting problem of climatic changes and mitigation of their consequences. The official point of view reflected in the Climate doctrine of the Russian Federation consists in the recognition of the need of the development of the state approach to the climatic problems and related issues on the basis of the comprehensive scientific analysis of ecological, economic and social factors. For this purpose, the integrated estimation models of interdisciplinary character are attracted. Their functionality is characterized by the possibility of construction and testing of various dynamic scenarios of complex systems. The main purposes of the computing experiments described in the article are a review of the consequences of hypothetical participation of Russia in initiatives for greenhouse gas reduction as the Kyoto Protocol and approbation of one of the calculation methods of the green GDP repr