Cheng, Lei; Li, Yizeng; Grosh, Karl
2013-01-01
An approximate boundary condition is developed in this paper to model fluid shear viscosity at boundaries of coupled fluid-structure system. The effect of shear viscosity is approximated by a correction term to the inviscid boundary condition, written in terms of second order in-plane derivatives of pressure. Both thin and thick viscous boundary layer approximations are formulated; the latter subsumes the former. These approximations are used to develop a variational formation, upon which a viscous finite element method (FEM) model is based, requiring only minor modifications to the boundary integral contributions of an existing inviscid FEM model. Since this FEM formulation has only one degree of freedom for pressure, it holds a great computational advantage over the conventional viscous FEM formulation which requires discretization of the full set of linearized Navier-Stokes equations. The results from thick viscous boundary layer approximation are found to be in good agreement with the prediction from a Navier-Stokes model. When applicable, thin viscous boundary layer approximation also gives accurate results with computational simplicity compared to the thick boundary layer formulation. Direct comparison of simulation results using the boundary layer approximations and a full, linearized Navier-Stokes model are made and used to evaluate the accuracy of the approximate technique. Guidelines are given for the parameter ranges over which the accurate application of the thick and thin boundary approximations can be used for a fluid-structure interaction problem. PMID:23729844
Boundary representation modelling techniques
2006-01-01
Provides the most complete presentation of boundary representation solid modelling yet publishedOffers basic reference information for software developers, application developers and users Includes a historical perspective as well as giving a background for modern research.
Standard model of knowledge representation
Yin, Wensheng
2016-09-01
Knowledge representation is the core of artificial intelligence research. Knowledge representation methods include predicate logic, semantic network, computer programming language, database, mathematical model, graphics language, natural language, etc. To establish the intrinsic link between various knowledge representation methods, a unified knowledge representation model is necessary. According to ontology, system theory, and control theory, a standard model of knowledge representation that reflects the change of the objective world is proposed. The model is composed of input, processing, and output. This knowledge representation method is not a contradiction to the traditional knowledge representation method. It can express knowledge in terms of multivariate and multidimensional. It can also express process knowledge, and at the same time, it has a strong ability to solve problems. In addition, the standard model of knowledge representation provides a way to solve problems of non-precision and inconsistent knowledge.
Digital models for architectonical representation
Directory of Open Access Journals (Sweden)
Stefano Brusaporci
2011-12-01
Full Text Available Digital instruments and technologies enrich architectonical representation and communication opportunities. Computer graphics is organized according the two phases of visualization and construction, that is modeling and rendering, structuring dichotomy of software technologies. Visualization modalities give different kinds of representations of the same 3D model and instruments produce a separation between drawing and image’s creation. Reverse modeling can be related to a synthesis process, ‘direct modeling’ follows an analytic procedure. The difference between interactive and not interactive applications is connected to the possibilities offered by informatics instruments, and relates to modeling and rendering. At the same time the word ‘model’ describes different phenomenon (i.e. files: mathematical model of the building and of the scene; raster representation and post-processing model. All these correlated different models constitute the architectonical interpretative model, that is a simulation of reality made by the model for improving the knowledge.
Guideline Knowledge Representation Model (GLIKREM)
Czech Academy of Sciences Publication Activity Database
Buchtela, David; Peleška, Jan; Veselý, Arnošt; Zvárová, Jana; Zvolský, Miroslav
2008-01-01
Roč. 4, č. 1 (2008), s. 17-23 ISSN 1801-5603 R&D Projects: GA MŠk(CZ) 1M06014 Institutional research plan: CEZ:AV0Z10300504 Keywords : knowledge representation * GLIF model * guidelines Subject RIV: IN - Informatics, Computer Science http://www.ejbi.org/articles/200812/34/1.html
Preon representations and composite models
International Nuclear Information System (INIS)
Kang, Kyungsik
1982-01-01
This is a brief report on the preon models which are investigated by In-Gyu Koh, A. N. Schellekens and myself and based on complex, anomaly-free and asymptotically free representations of SU(3) to SU(8), SO(4N+2) and E 6 with no more than two different preons. Complete list of the representations that are complex anomaly-free and asymptotically free has been given by E. Eichten, I.-G. Koh and myself. The assumptions made about the ground state composites and the role of Fermi statistics to determine the metaflavor wave functions are discussed in some detail. We explain the method of decompositions of tensor products with definite permutation properties which has been developed for this purpose by I.-G. Koh, A.N. Schellekens and myself. An example based on an anomaly-free representation of the confining metacolor group SU(5) is discussed
Probabilistic graphical model representation in phylogenetics.
Höhna, Sebastian; Heath, Tracy A; Boussau, Bastien; Landis, Michael J; Ronquist, Fredrik; Huelsenbeck, John P
2014-09-01
Recent years have seen a rapid expansion of the model space explored in statistical phylogenetics, emphasizing the need for new approaches to statistical model representation and software development. Clear communication and representation of the chosen model is crucial for: (i) reproducibility of an analysis, (ii) model development, and (iii) software design. Moreover, a unified, clear and understandable framework for model representation lowers the barrier for beginners and nonspecialists to grasp complex phylogenetic models, including their assumptions and parameter/variable dependencies. Graphical modeling is a unifying framework that has gained in popularity in the statistical literature in recent years. The core idea is to break complex models into conditionally independent distributions. The strength lies in the comprehensibility, flexibility, and adaptability of this formalism, and the large body of computational work based on it. Graphical models are well-suited to teach statistical models, to facilitate communication among phylogeneticists and in the development of generic software for simulation and statistical inference. Here, we provide an introduction to graphical models for phylogeneticists and extend the standard graphical model representation to the realm of phylogenetics. We introduce a new graphical model component, tree plates, to capture the changing structure of the subgraph corresponding to a phylogenetic tree. We describe a range of phylogenetic models using the graphical model framework and introduce modules to simplify the representation of standard components in large and complex models. Phylogenetic model graphs can be readily used in simulation, maximum likelihood inference, and Bayesian inference using, for example, Metropolis-Hastings or Gibbs sampling of the posterior distribution. © The Author(s) 2014. Published by Oxford University Press, on behalf of the Society of Systematic Biologists.
Three representations of the Ising model
Kruis, J.; Maris, G.
2016-01-01
Statistical models that analyse (pairwise) relations between variables encompass assumptions about the underlying mechanism that generated the associations in the observed data. In the present paper we demonstrate that three Ising model representations exist that, although each proposes a distinct
Geometric Algebra Model of Distributed Representations
Patyk, Agnieszka
Formalism based on GA is an alternative to distributed representation models developed so far: Smolensky's tensor product, Holographic Reduced Representations (HRR), and Binary Spatter Code (BSC). Convolutions are replaced by geometric products interpretable in terms of geometry, which seems to be the most natural language for visualization of higher concepts. This paper recalls the main ideas behind the GA model and investigates recognition test results using both inner product and a clipped version of matrix representation. The influence of accidental blade equality on recognition is also studied. Finally, the efficiency of the GA model is compared to that of previously developed models.
Improving Representational Competence with Concrete Models
Stieff, Mike; Scopelitis, Stephanie; Lira, Matthew E.; DeSutter, Dane
2016-01-01
Representational competence is a primary contributor to student learning in science, technology, engineering, and math (STEM) disciplines and an optimal target for instruction at all educational levels. We describe the design and implementation of a learning activity that uses concrete models to improve students' representational competence and…
Geometric Algebra Model of Distributed Representations
Patyk, Agnieszka
2010-01-01
Formalism based on GA is an alternative to distributed representation models developed so far --- Smolensky's tensor product, Holographic Reduced Representations (HRR) and Binary Spatter Code (BSC). Convolutions are replaced by geometric products, interpretable in terms of geometry which seems to be the most natural language for visualization of higher concepts. This paper recalls the main ideas behind the GA model and investigates recognition test results using both inner product and a clipp...
General regression and representation model for classification.
Directory of Open Access Journals (Sweden)
Jianjun Qian
Full Text Available Recently, the regularized coding-based classification methods (e.g. SRC and CRC show a great potential for pattern classification. However, most existing coding methods assume that the representation residuals are uncorrelated. In real-world applications, this assumption does not hold. In this paper, we take account of the correlations of the representation residuals and develop a general regression and representation model (GRR for classification. GRR not only has advantages of CRC, but also takes full use of the prior information (e.g. the correlations between representation residuals and representation coefficients and the specific information (weight matrix of image pixels to enhance the classification performance. GRR uses the generalized Tikhonov regularization and K Nearest Neighbors to learn the prior information from the training data. Meanwhile, the specific information is obtained by using an iterative algorithm to update the feature (or image pixel weights of the test sample. With the proposed model as a platform, we design two classifiers: basic general regression and representation classifier (B-GRR and robust general regression and representation classifier (R-GRR. The experimental results demonstrate the performance advantages of proposed methods over state-of-the-art algorithms.
Grand unified models including extra Z bosons
International Nuclear Information System (INIS)
Li Tiezhong
1989-01-01
The grand unified theories (GUT) of the simple Lie groups including extra Z bosons are discussed. Under authors's hypothesis there are only SU 5+m SO 6+4n and E 6 groups. The general discussion of SU 5+m is given, then the SU 6 and SU 7 are considered. In SU 6 the 15+6 * +6 * fermion representations are used, which are not same as others in fermion content, Yukawa coupling and broken scales. A conception of clans of particles, which are not families, is suggested. These clans consist of extra Z bosons and the corresponding fermions of the scale. The all of fermions in the clans are down quarks except for the standard model which consists of Z bosons and 15 fermions, therefore, the spectrum of the hadrons which are composed of these down quarks are different from hadrons at present
Designing and evaluating representations to model pedagogy
Directory of Open Access Journals (Sweden)
Elizabeth Masterman
2013-08-01
Full Text Available This article presents the case for a theory-informed approach to designing and evaluating representations for implementation in digital tools to support Learning Design, using the framework of epistemic efficacy as an example. This framework, which is rooted in the literature of cognitive psychology, is operationalised through dimensions of fit that attend to: (1 the underlying ontology of the domain, (2 the purpose of the task that the representation is intended to facilitate, (3 how best to support the cognitive processes of the users of the representations, (4 users’ differing needs and preferences, and (5 the tool and environment in which the representations are constructed and manipulated.Through showing how epistemic efficacy can be applied to the design and evaluation of representations, the article presents the Learning Designer, a constructionist microworld in which teachers can both assemble their learning designs and model their pedagogy in terms of students’ potential learning experience. Although the activity of modelling may add to the cognitive task of design, the article suggests that the insights thereby gained can additionally help a lecturer who wishes to reuse a particular learning design to make informed decisions about its value to their practice.
Seepage Model for PA Including Drift Collapse
International Nuclear Information System (INIS)
Li, G.; Tsang, C.
2000-01-01
The purpose of this Analysis/Model Report (AMR) is to document the predictions and analysis performed using the Seepage Model for Performance Assessment (PA) and the Disturbed Drift Seepage Submodel for both the Topopah Spring middle nonlithophysal and lower lithophysal lithostratigraphic units at Yucca Mountain. These results will be used by PA to develop the probability distribution of water seepage into waste-emplacement drifts at Yucca Mountain, Nevada, as part of the evaluation of the long term performance of the potential repository. This AMR is in accordance with the ''Technical Work Plan for Unsaturated Zone (UZ) Flow and Transport Process Model Report'' (CRWMS M andO 2000 [153447]). This purpose is accomplished by performing numerical simulations with stochastic representations of hydrological properties, using the Seepage Model for PA, and evaluating the effects of an alternative drift geometry representing a partially collapsed drift using the Disturbed Drift Seepage Submodel. Seepage of water into waste-emplacement drifts is considered one of the principal factors having the greatest impact of long-term safety of the repository system (CRWMS M andO 2000 [153225], Table 4-1). This AMR supports the analysis and simulation that are used by PA to develop the probability distribution of water seepage into drift, and is therefore a model of primary (Level 1) importance (AP-3.15Q, ''Managing Technical Product Inputs''). The intended purpose of the Seepage Model for PA is to support: (1) PA; (2) Abstraction of Drift-Scale Seepage; and (3) Unsaturated Zone (UZ) Flow and Transport Process Model Report (PMR). Seepage into drifts is evaluated by applying numerical models with stochastic representations of hydrological properties and performing flow simulations with multiple realizations of the permeability field around the drift. The Seepage Model for PA uses the distribution of permeabilities derived from air injection testing in niches and in the cross drift to
Seepage Model for PA Including Dift Collapse
Energy Technology Data Exchange (ETDEWEB)
G. Li; C. Tsang
2000-12-20
The purpose of this Analysis/Model Report (AMR) is to document the predictions and analysis performed using the Seepage Model for Performance Assessment (PA) and the Disturbed Drift Seepage Submodel for both the Topopah Spring middle nonlithophysal and lower lithophysal lithostratigraphic units at Yucca Mountain. These results will be used by PA to develop the probability distribution of water seepage into waste-emplacement drifts at Yucca Mountain, Nevada, as part of the evaluation of the long term performance of the potential repository. This AMR is in accordance with the ''Technical Work Plan for Unsaturated Zone (UZ) Flow and Transport Process Model Report'' (CRWMS M&O 2000 [153447]). This purpose is accomplished by performing numerical simulations with stochastic representations of hydrological properties, using the Seepage Model for PA, and evaluating the effects of an alternative drift geometry representing a partially collapsed drift using the Disturbed Drift Seepage Submodel. Seepage of water into waste-emplacement drifts is considered one of the principal factors having the greatest impact of long-term safety of the repository system (CRWMS M&O 2000 [153225], Table 4-1). This AMR supports the analysis and simulation that are used by PA to develop the probability distribution of water seepage into drift, and is therefore a model of primary (Level 1) importance (AP-3.15Q, ''Managing Technical Product Inputs''). The intended purpose of the Seepage Model for PA is to support: (1) PA; (2) Abstraction of Drift-Scale Seepage; and (3) Unsaturated Zone (UZ) Flow and Transport Process Model Report (PMR). Seepage into drifts is evaluated by applying numerical models with stochastic representations of hydrological properties and performing flow simulations with multiple realizations of the permeability field around the drift. The Seepage Model for PA uses the distribution of permeabilities derived from air injection testing in
BIM-Enabled Conceptual Modelling and Representation of Building Circulation
Directory of Open Access Journals (Sweden)
Jin Kook Lee
2014-08-01
Full Text Available This paper describes how a building information modelling (BIM-based approach for building circulation enables us to change the process of building design in terms of its computational representation and processes, focusing on the conceptual modelling and representation of circulation within buildings. BIM has been designed for use by several BIM authoring tools, in particular with the widely known interoperable industry foundation classes (IFCs, which follow an object-oriented data modelling methodology. Advances in BIM authoring tools, using space objects and their relations defined in an IFC's schema, have made it possible to model, visualize and analyse circulation within buildings prior to their construction. Agent-based circulation has long been an interdisciplinary topic of research across several areas, including design computing, computer science, architectural morphology, human behaviour and environmental psychology. Such conventional approaches to building circulation are centred on navigational knowledge about built environments, and represent specific circulation paths and regulations. This paper, however, places emphasis on the use of ‘space objects’ in BIM-enabled design processes rather than on circulation agents, the latter of which are not defined in the IFCs' schemas. By introducing and reviewing some associated research and projects, this paper also surveys how such a circulation representation is applicable to the analysis of building circulation-related rules.
Bayesian variable order Markov models: Towards Bayesian predictive state representations
Dimitrakakis, C.
2009-01-01
We present a Bayesian variable order Markov model that shares many similarities with predictive state representations. The resulting models are compact and much easier to specify and learn than classical predictive state representations. Moreover, we show that they significantly outperform a more
Representation-free description of light-pulse atom interferometry including non-inertial effects
Energy Technology Data Exchange (ETDEWEB)
Kleinert, Stephan, E-mail: stephan.kleinert@uni-ulm.de [Institut für Quantenphysik and Center for Integrated Quantum Science and Technology (IQST), Universität Ulm, Albert-Einstein-Allee 11, D-89081 Ulm (Germany); Kajari, Endre; Roura, Albert [Institut für Quantenphysik and Center for Integrated Quantum Science and Technology (IQST), Universität Ulm, Albert-Einstein-Allee 11, D-89081 Ulm (Germany); Schleich, Wolfgang P. [Institut für Quantenphysik and Center for Integrated Quantum Science and Technology (IQST), Universität Ulm, Albert-Einstein-Allee 11, D-89081 Ulm (Germany); Texas A& M University Institute for Advanced Study (TIAS), Institute for Quantum Science and Engineering (IQSE) and Department of Physics and Astronomy, Texas A& M University College Station, TX 77843-4242 (United States)
2015-12-30
Light-pulse atom interferometers rely on the wave nature of matter and its manipulation with coherent laser pulses. They are used for precise gravimetry and inertial sensing as well as for accurate measurements of fundamental constants. Reaching higher precision requires longer interferometer times which are naturally encountered in microgravity environments such as drop-tower facilities, sounding rockets and dedicated satellite missions aiming at fundamental quantum physics in space. In all those cases, it is necessary to consider arbitrary trajectories and varying orientations of the interferometer set-up in non-inertial frames of reference. Here we provide a versatile representation-free description of atom interferometry entirely based on operator algebra to address this general situation. We show how to analytically determine the phase shift as well as the visibility of interferometers with an arbitrary number of pulses including the effects of local gravitational accelerations, gravity gradients, the rotation of the lasers and non-inertial frames of reference. Our method conveniently unifies previous results and facilitates the investigation of novel interferometer geometries.
Deep Supervised, but Not Unsupervised, Models May Explain IT Cortical Representation
Khaligh-Razavi, Seyed-Mahdi; Kriegeskorte, Nikolaus
2014-01-01
Inferior temporal (IT) cortex in human and nonhuman primates serves visual object recognition. Computational object-vision models, although continually improving, do not yet reach human performance. It is unclear to what extent the internal representations of computational models can explain the IT representation. Here we investigate a wide range of computational model representations (37 in total), testing their categorization performance and their ability to account for the IT representational geometry. The models include well-known neuroscientific object-recognition models (e.g. HMAX, VisNet) along with several models from computer vision (e.g. SIFT, GIST, self-similarity features, and a deep convolutional neural network). We compared the representational dissimilarity matrices (RDMs) of the model representations with the RDMs obtained from human IT (measured with fMRI) and monkey IT (measured with cell recording) for the same set of stimuli (not used in training the models). Better performing models were more similar to IT in that they showed greater clustering of representational patterns by category. In addition, better performing models also more strongly resembled IT in terms of their within-category representational dissimilarities. Representational geometries were significantly correlated between IT and many of the models. However, the categorical clustering observed in IT was largely unexplained by the unsupervised models. The deep convolutional network, which was trained by supervision with over a million category-labeled images, reached the highest categorization performance and also best explained IT, although it did not fully explain the IT data. Combining the features of this model with appropriate weights and adding linear combinations that maximize the margin between animate and inanimate objects and between faces and other objects yielded a representation that fully explained our IT data. Overall, our results suggest that explaining IT requires
Deep supervised, but not unsupervised, models may explain IT cortical representation.
Khaligh-Razavi, Seyed-Mahdi; Kriegeskorte, Nikolaus
2014-11-01
Inferior temporal (IT) cortex in human and nonhuman primates serves visual object recognition. Computational object-vision models, although continually improving, do not yet reach human performance. It is unclear to what extent the internal representations of computational models can explain the IT representation. Here we investigate a wide range of computational model representations (37 in total), testing their categorization performance and their ability to account for the IT representational geometry. The models include well-known neuroscientific object-recognition models (e.g. HMAX, VisNet) along with several models from computer vision (e.g. SIFT, GIST, self-similarity features, and a deep convolutional neural network). We compared the representational dissimilarity matrices (RDMs) of the model representations with the RDMs obtained from human IT (measured with fMRI) and monkey IT (measured with cell recording) for the same set of stimuli (not used in training the models). Better performing models were more similar to IT in that they showed greater clustering of representational patterns by category. In addition, better performing models also more strongly resembled IT in terms of their within-category representational dissimilarities. Representational geometries were significantly correlated between IT and many of the models. However, the categorical clustering observed in IT was largely unexplained by the unsupervised models. The deep convolutional network, which was trained by supervision with over a million category-labeled images, reached the highest categorization performance and also best explained IT, although it did not fully explain the IT data. Combining the features of this model with appropriate weights and adding linear combinations that maximize the margin between animate and inanimate objects and between faces and other objects yielded a representation that fully explained our IT data. Overall, our results suggest that explaining IT requires
Deep supervised, but not unsupervised, models may explain IT cortical representation.
Directory of Open Access Journals (Sweden)
Seyed-Mahdi Khaligh-Razavi
2014-11-01
Full Text Available Inferior temporal (IT cortex in human and nonhuman primates serves visual object recognition. Computational object-vision models, although continually improving, do not yet reach human performance. It is unclear to what extent the internal representations of computational models can explain the IT representation. Here we investigate a wide range of computational model representations (37 in total, testing their categorization performance and their ability to account for the IT representational geometry. The models include well-known neuroscientific object-recognition models (e.g. HMAX, VisNet along with several models from computer vision (e.g. SIFT, GIST, self-similarity features, and a deep convolutional neural network. We compared the representational dissimilarity matrices (RDMs of the model representations with the RDMs obtained from human IT (measured with fMRI and monkey IT (measured with cell recording for the same set of stimuli (not used in training the models. Better performing models were more similar to IT in that they showed greater clustering of representational patterns by category. In addition, better performing models also more strongly resembled IT in terms of their within-category representational dissimilarities. Representational geometries were significantly correlated between IT and many of the models. However, the categorical clustering observed in IT was largely unexplained by the unsupervised models. The deep convolutional network, which was trained by supervision with over a million category-labeled images, reached the highest categorization performance and also best explained IT, although it did not fully explain the IT data. Combining the features of this model with appropriate weights and adding linear combinations that maximize the margin between animate and inanimate objects and between faces and other objects yielded a representation that fully explained our IT data. Overall, our results suggest that explaining
Do Knowledge-Component Models Need to Incorporate Representational Competencies?
Rau, Martina Angela
2017-01-01
Traditional knowledge-component models describe students' content knowledge (e.g., their ability to carry out problem-solving procedures or their ability to reason about a concept). In many STEM domains, instruction uses multiple visual representations such as graphs, figures, and diagrams. The use of visual representations implies a…
Promoting Representational Competence with Molecular Models in Organic Chemistry
Stull, Andrew T.; Gainer, Morgan; Padalkar, Shamin; Hegarty, Mary
2016-01-01
Mastering the many different diagrammatic representations of molecules used in organic chemistry is challenging for students. This article summarizes recent research showing that manipulating 3-D molecular models can facilitate the understanding and use of these representations. Results indicate that students are more successful in translating…
Improved dust representation in the Community Atmosphere Model
Albani, S.; Mahowald, N. M.; Perry, A. T.; Scanza, R. A.; Zender, C. S.; Heavens, N. G.; Maggi, V.; Kok, J. F.; Otto-Bliesner, B. L.
2014-09-01
Aerosol-climate interactions constitute one of the major sources of uncertainty in assessing changes in aerosol forcing in the anthropocene as well as understanding glacial-interglacial cycles. Here we focus on improving the representation of mineral dust in the Community Atmosphere Model and assessing the impacts of the improvements in terms of direct effects on the radiative balance of the atmosphere. We simulated the dust cycle using different parameterization sets for dust emission, size distribution, and optical properties. Comparing the results of these simulations with observations of concentration, deposition, and aerosol optical depth allows us to refine the representation of the dust cycle and its climate impacts. We propose a tuning method for dust parameterizations to allow the dust module to work across the wide variety of parameter settings which can be used within the Community Atmosphere Model. Our results include a better representation of the dust cycle, most notably for the improved size distribution. The estimated net top of atmosphere direct dust radiative forcing is -0.23 ± 0.14 W/m2 for present day and -0.32 ± 0.20 W/m2 at the Last Glacial Maximum. From our study and sensitivity tests, we also derive some general relevant findings, supporting the concept that the magnitude of the modeled dust cycle is sensitive to the observational data sets and size distribution chosen to constrain the model as well as the meteorological forcing data, even within the same modeling framework, and that the direct radiative forcing of dust is strongly sensitive to the optical properties and size distribution used.
Declarative representation of uncertainty in mathematical models.
Miller, Andrew K; Britten, Randall D; Nielsen, Poul M F
2012-01-01
An important aspect of multi-scale modelling is the ability to represent mathematical models in forms that can be exchanged between modellers and tools. While the development of languages like CellML and SBML have provided standardised declarative exchange formats for mathematical models, independent of the algorithm to be applied to the model, to date these standards have not provided a clear mechanism for describing parameter uncertainty. Parameter uncertainty is an inherent feature of many real systems. This uncertainty can result from a number of situations, such as: when measurements include inherent error; when parameters have unknown values and so are replaced by a probability distribution by the modeller; when a model is of an individual from a population, and parameters have unknown values for the individual, but the distribution for the population is known. We present and demonstrate an approach by which uncertainty can be described declaratively in CellML models, by utilising the extension mechanisms provided in CellML. Parameter uncertainty can be described declaratively in terms of either a univariate continuous probability density function or multiple realisations of one variable or several (typically non-independent) variables. We additionally present an extension to SED-ML (the Simulation Experiment Description Markup Language) to describe sampling sensitivity analysis simulation experiments. We demonstrate the usability of the approach by encoding a sample model in the uncertainty markup language, and by developing a software implementation of the uncertainty specification (including the SED-ML extension for sampling sensitivty analyses) in an existing CellML software library, the CellML API implementation. We used the software implementation to run sampling sensitivity analyses over the model to demonstrate that it is possible to run useful simulations on models with uncertainty encoded in this form.
Declarative representation of uncertainty in mathematical models.
Directory of Open Access Journals (Sweden)
Andrew K Miller
Full Text Available An important aspect of multi-scale modelling is the ability to represent mathematical models in forms that can be exchanged between modellers and tools. While the development of languages like CellML and SBML have provided standardised declarative exchange formats for mathematical models, independent of the algorithm to be applied to the model, to date these standards have not provided a clear mechanism for describing parameter uncertainty. Parameter uncertainty is an inherent feature of many real systems. This uncertainty can result from a number of situations, such as: when measurements include inherent error; when parameters have unknown values and so are replaced by a probability distribution by the modeller; when a model is of an individual from a population, and parameters have unknown values for the individual, but the distribution for the population is known. We present and demonstrate an approach by which uncertainty can be described declaratively in CellML models, by utilising the extension mechanisms provided in CellML. Parameter uncertainty can be described declaratively in terms of either a univariate continuous probability density function or multiple realisations of one variable or several (typically non-independent variables. We additionally present an extension to SED-ML (the Simulation Experiment Description Markup Language to describe sampling sensitivity analysis simulation experiments. We demonstrate the usability of the approach by encoding a sample model in the uncertainty markup language, and by developing a software implementation of the uncertainty specification (including the SED-ML extension for sampling sensitivty analyses in an existing CellML software library, the CellML API implementation. We used the software implementation to run sampling sensitivity analyses over the model to demonstrate that it is possible to run useful simulations on models with uncertainty encoded in this form.
Shell-model representation to describe α emission
Delion, D. S.; Liotta, R. J.
2013-04-01
It is shown that the standard shell-model representation is inadequate to explain cluster decay processes due to a deficient asymptotic behavior of the corresponding single-particle wave functions. A new representation is proposed which is derived from a mean field consisting of the standard Woods-Saxon plus spin-orbit potential of the shell model, with an additional attractive pocket potential of a Gaussian form localized on the nuclear surface. The eigenvectors of this new mean field provide a representation which retains all the benefits of the standard shell model while at the same time reproducing well the experimental absolute α-decay widths from heavy nuclei.
XML for data representation and model specification in neuroscience.
Crook, Sharon M; Howell, Fred W
2007-01-01
EXtensible Markup Language (XML) technology provides an ideal representation for the complex structure of models and neuroscience data, as it is an open file format and provides a language-independent method for storing arbitrarily complex structured information. XML is composed of text and tags that explicitly describe the structure and semantics of the content of the document. In this chapter, we describe some of the common uses of XML in neuroscience, with case studies in representing neuroscience data and defining model descriptions based on examples from NeuroML. The specific methods that we discuss include (1) reading and writing XML from applications, (2) exporting XML from databases, (3) using XML standards to represent neuronal morphology data, (4) using XML to represent experimental metadata, and (5) creating new XML specifications for models.
Converting biomolecular modelling data based on an XML representation.
Sun, Yudong; McKeever, Steve
2008-08-25
Biomolecular modelling has provided computational simulation based methods for investigating biological processes from quantum chemical to cellular levels. Modelling such microscopic processes requires atomic description of a biological system and conducts in fine timesteps. Consequently the simulations are extremely computationally demanding. To tackle this limitation, different biomolecular models have to be integrated in order to achieve high-performance simulations. The integration of diverse biomolecular models needs to convert molecular data between different data representations of different models. This data conversion is often non-trivial, requires extensive human input and is inevitably error prone. In this paper we present an automated data conversion method for biomolecular simulations between molecular dynamics and quantum mechanics/molecular mechanics models. Our approach is developed around an XML data representation called BioSimML (Biomolecular Simulation Markup Language). BioSimML provides a domain specific data representation for biomolecular modelling which can effciently support data interoperability between different biomolecular simulation models and data formats.
SEEPAGE MODEL FOR PA INCLUDING DRIFT COLLAPSE
International Nuclear Information System (INIS)
C. Tsang
2004-01-01
The purpose of this report is to document the predictions and analyses performed using the seepage model for performance assessment (SMPA) for both the Topopah Spring middle nonlithophysal (Tptpmn) and lower lithophysal (Tptpll) lithostratigraphic units at Yucca Mountain, Nevada. Look-up tables of seepage flow rates into a drift (and their uncertainty) are generated by performing numerical simulations with the seepage model for many combinations of the three most important seepage-relevant parameters: the fracture permeability, the capillary-strength parameter 1/a, and the percolation flux. The percolation flux values chosen take into account flow focusing effects, which are evaluated based on a flow-focusing model. Moreover, multiple realizations of the underlying stochastic permeability field are conducted. Selected sensitivity studies are performed, including the effects of an alternative drift geometry representing a partially collapsed drift from an independent drift-degradation analysis (BSC 2004 [DIRS 166107]). The intended purpose of the seepage model is to provide results of drift-scale seepage rates under a series of parameters and scenarios in support of the Total System Performance Assessment for License Application (TSPA-LA). The SMPA is intended for the evaluation of drift-scale seepage rates under the full range of parameter values for three parameters found to be key (fracture permeability, the van Genuchten 1/a parameter, and percolation flux) and drift degradation shape scenarios in support of the TSPA-LA during the period of compliance for postclosure performance [Technical Work Plan for: Performance Assessment Unsaturated Zone (BSC 2002 [DIRS 160819], Section I-4-2-1)]. The flow-focusing model in the Topopah Spring welded (TSw) unit is intended to provide an estimate of flow focusing factors (FFFs) that (1) bridge the gap between the mountain-scale and drift-scale models, and (2) account for variability in local percolation flux due to
Directory of Open Access Journals (Sweden)
M. D. Petters
2008-10-01
Full Text Available The ability of a particle to serve as a cloud condensation nucleus in the atmosphere is determined by its size, hygroscopicity and its solubility in water. Usually size and hygroscopicity alone are sufficient to predict CCN activity. Single parameter representations for hygroscopicity have been shown to successfully model complex, multicomponent particles types. Under the assumption of either complete solubility, or complete insolubility of a component, it is not necessary to explicitly include that component's solubility into the single parameter framework. This is not the case if sparingly soluble materials are present. In this work we explicitly account for solubility by modifying the single parameter equations. We demonstrate that sensitivity to the actual value of solubility emerges only in the regime of 2×10^{−1}–5×10^{−4}, where the solubility values are expressed as volume of solute per unit volume of water present in a saturated solution. Compounds that do not fall inside this sparingly soluble envelope can be adequately modeled assuming they are either infinitely soluble in water or completely insoluble.
2009-09-01
fashion, etc. A related aspect of a goal-directed task representation (such as Hierarchical Task Analysis, HTA : Annett, 2003; Annett & Duncan, 1967) is...The pandemonium model employs daemons that shriek for attention (a metaphorical prioritisation scheme) although it isn’t necessarily a winner take all...Such phenomena might be better captured with a mixture of HTA and TNO’s pandemonium model, or some other task prioritization scheme, to reflect
The representation of knowledge within model-based control systems
International Nuclear Information System (INIS)
Weygand, D.P.; Koul, R.
1987-01-01
Representation of knowledge in artificially intelligent systems is discussed. Types of knowledge that might need to be represented in AI systems are listed, and include knowledge about objects, events, knowledge about how to do things, and knowledge about what human beings know (meta-knowledge). The use of knowledge in AI systems is discussed in terms of acquiring and retrieving knowledge and reasoning about known facts. Different kinds of reasonings or representations are ghen described with some examples given. These include formal reasoning or logical representation, which is related to mathematical logic, production systems, which are based on the idea of condition-action pairs (production), procedural reasoning, which uses pre-formed plans to solve problems, frames, which provide a structure for representing knowledge in an organized manner, direct analogical representations, which represent knowledge in such a manner that permits some observation without deduction
Richter, Martin; Marquetand, Philipp; González-Vázquez, Jesús; Sola, Ignacio; González, Leticia
2011-05-10
We present a semiclassical surface-hopping method which is able to treat arbitrary couplings in molecular systems including all degrees of freedom. A reformulation of the standard surface-hopping scheme in terms of a unitary transformation matrix allows for the description of interactions like spin-orbit coupling or transitions induced by laser fields. The accuracy of our method is demonstrated in two systems. The first one, consisting of two model electronic states, validates the semiclassical approach in the presence of an electric field. In the second one, the dynamics in the IBr molecule in the presence of spin-orbit coupling after laser excitation is investigated. Due to an avoided crossing that originates from spin-orbit coupling, IBr dissociates into two channels: I + Br((2)P3/2) and I + Br*((2)P1/2). In both systems, the obtained results are in very good agreement with those calculated from exact quantum dynamical simulations.
Knowledge representation to support reasoning based on multiple models
Gillam, April; Seidel, Jorge P.; Parker, Alice C.
1990-01-01
Model Based Reasoning is a powerful tool used to design and analyze systems, which are often composed of numerous interactive, interrelated subsystems. Models of the subsystems are written independently and may be used together while they are still under development. Thus the models are not static. They evolve as information becomes obsolete, as improved artifact descriptions are developed, and as system capabilities change. Researchers are using three methods to support knowledge/data base growth, to track the model evolution, and to handle knowledge from diverse domains. First, the representation methodology is based on having pools, or types, of knowledge from which each model is constructed. In addition information is explicit. This includes the interactions between components, the description of the artifact structure, and the constraints and limitations of the models. The third principle we have followed is the separation of the data and knowledge from the inferencing and equation solving mechanisms. This methodology is used in two distinct knowledge-based systems: one for the design of space systems and another for the synthesis of VLSI circuits. It has facilitated the growth and evolution of our models, made accountability of results explicit, and provided credibility for the user community. These capabilities have been implemented and are being used in actual design projects.
A semiotically oriented cognitive model of knowledge representation
Farkas, József István
2008-01-01
This thesis introduces a model for knowledge representation as a sign recognition process, on the basis of an analysis of the properties of cognitive activity. By offering a logical account of this model, the existence of a `naive' logic underlying human information processing is revealed, which in
A Model of Representational Spaces in Human Cortex.
Guntupalli, J Swaroop; Hanke, Michael; Halchenko, Yaroslav O; Connolly, Andrew C; Ramadge, Peter J; Haxby, James V
2016-06-01
Current models of the functional architecture of human cortex emphasize areas that capture coarse-scale features of cortical topography but provide no account for population responses that encode information in fine-scale patterns of activity. Here, we present a linear model of shared representational spaces in human cortex that captures fine-scale distinctions among population responses with response-tuning basis functions that are common across brains and models cortical patterns of neural responses with individual-specific topographic basis functions. We derive a common model space for the whole cortex using a new algorithm, searchlight hyperalignment, and complex, dynamic stimuli that provide a broad sampling of visual, auditory, and social percepts. The model aligns representations across brains in occipital, temporal, parietal, and prefrontal cortices, as shown by between-subject multivariate pattern classification and intersubject correlation of representational geometry, indicating that structural principles for shared neural representations apply across widely divergent domains of information. The model provides a rigorous account for individual variability of well-known coarse-scale topographies, such as retinotopy and category selectivity, and goes further to account for fine-scale patterns that are multiplexed with coarse-scale topographies and carry finer distinctions. © The Author 2016. Published by Oxford University Press.
ENHANCING HSPF MODEL CHANNEL HYDRAULIC REPRESENTATION
The Hydrological Simulation Program - FORTRAN (HSPF) is a comprehensive watershed model, which employs depth-area-volume-flow relationships known as hydraulic function table (FTABLE) to represent stream channel cross-sections and reservoirs. An accurate FTABLE determination for a...
Emotion in Music: representation and computational modeling
Aljanaki, A.|info:eu-repo/dai/nl/34570956X
2016-01-01
Music emotion recognition (MER) deals with music classification by emotion using signal processing and machine learning techniques. Emotion ontology for music is not well established yet. Musical emotion can be conceptualized through various emotional models: categorical, dimensional, or
An Integrated Biochemistry Laboratory, Including Molecular Modeling
Hall, Adele J. Wolfson Mona L.; Branham, Thomas R.
1996-11-01
) experience with methods of protein purification; (iii) incorporation of appropriate controls into experiments; (iv) use of basic statistics in data analysis; (v) writing papers and grant proposals in accepted scientific style; (vi) peer review; (vii) oral presentation of results and proposals; and (viii) introduction to molecular modeling. Figure 1 illustrates the modular nature of the lab curriculum. Elements from each of the exercises can be separated and treated as stand-alone exercises, or combined into short or long projects. We have been able to offer the opportunity to use sophisticated molecular modeling in the final module through funding from an NSF-ILI grant. However, many of the benefits of the research proposal can be achieved with other computer programs, or even by literature survey alone. Figure 1.Design of project-based biochemistry laboratory. Modules (projects, or portions of projects) are indicated as boxes. Each of these can be treated independently, or used as part of a larger project. Solid lines indicate some suggested paths from one module to the next. The skills and knowledge required for protein purification and design are developed in three units: (i) an introduction to critical assays needed to monitor degree of purification, including an evaluation of assay parameters; (ii) partial purification by ion-exchange techniques; and (iii) preparation of a grant proposal on protein design by mutagenesis. Brief descriptions of each of these units follow, with experimental details of each project at the end of this paper. Assays for Lysozyme Activity and Protein Concentration (4 weeks) The assays mastered during the first unit are a necessary tool for determining the purity of the enzyme during the second unit on purification by ion exchange. These assays allow an introduction to the concept of specific activity (units of enzyme activity per milligram of total protein) as a measure of purity. In this first sequence, students learn a turbidimetric assay
From the Osterwalder canvas to an alternative business model representation
Verrue, Johan
2015-01-01
The Osterwalder business model canvas (BMC) is used by many entrepreneurs, managers, consultants and business schools. In our research we have investigated whether the canvas is a valid instrument for gaining an in-depth, accurate insight into business models. Therefore we have performed initial multiple case study research which concluded that the canvas does not generate valid business model (BM) representations. In our second multiple case study, we have constructed an alternative BM frame...
Object models and object representation Tutorial 4
CERN. Geneva; Mahey, Mahendra
2007-01-01
This tutorial will provide a practical overview of current practices in modelling complex or compound digital objects. It will examine some of the key scenarios around creating complex objects and will explore a number of approaches to packaging and transport. Taking research papers, or scholarly works, as an example, the tutorial will explore the different ways in which these, and their descriptive metadata, can be treated as complex objects. Relevant application profiles and metadata formats will be introduced and compared, such as Dublin Core, in particular the DCMI Abstract Model, and MODS, alongside content packaging standards, such as METS MPEG 21 DIDL and IMS CP. Finally, we will consider some future issues and activities that are seeking to address these. The tutorial will be of interest to librarians and technical staff with an interest in metadata or complex objects, their creation, management and re-use.
A Description Logic Based Knowledge Representation Model for Concept Understanding
DEFF Research Database (Denmark)
Badie, Farshad
2018-01-01
This research employs Description Logics in order to focus on logical description and analysis of the phenomenon of ‘concept understanding’. The article will deal with a formal-semantic model for figuring out the underlying logical assumptions of ‘concept understanding’ in knowledge representation...
THE INFLUENCE MODEL OF KNOWLEDGE REPRESENTATION ON KNOWLEDGE QUALITY
Directory of Open Access Journals (Sweden)
Shvets Valentyna
2012-06-01
Full Text Available The influence model of knowledge representation and training character testing in MOODLE on progress of students has been investigated in the article. The knowledge representation in the form of graphs and frames is able to raise the level of knowledge significantly. The using of the animation (in Flash and SketchUp leads to better memorization of information owing subconscious reaction of students. The testing of students in training conditions of e-learning platform MOODLE makes more active the programme of the intellectual curiosity that is the function of the brain.
Representation, Modeling and Recognition of Outdoor Scenes
1993-11-01
describing this work, intended for journal publication, has been completed and is included in this report as Appendix A.; also see the detailed discussion of...A paper describing this work has been published in the International Journal of Computer Vision (XAn optimization based approach to the interpretation...Kluwer Acdemic Publislers, Manubcoiud in The Ndetrhafds. An Optimiation-Based Approach to the Interpretation of Single Line Drawings as 3D Wire Frames
Enhanced battery model including temperature effects
Rosca, B.; Wilkins, S.
2013-01-01
Within electric and hybrid vehicles, batteries are used to provide/buffer the energy required for driving. However, battery performance varies throughout the temperature range specific to automotive applications, and as such, models that describe this behaviour are required. This paper presents a
Converting Biomolecular Modelling Data Based on an XML Representation
Directory of Open Access Journals (Sweden)
Sun Yudong
2008-06-01
Full Text Available Biomolecular modelling has provided computational simulation based methods for investigating biological processes from quantum chemical to cellular levels. Modelling such microscopic processes requires atomic description of a biological system and conducts in fine timesteps. Consequently the simulations are extremely computationally demanding. To tackle this limitation, different biomolecular models have to be integrated in order to achieve high-performance simulations. The integration of diverse biomolecular models needs to convert molecular data between different data representations of different models. This data conversion is often non-trivial, requires extensive human input and is inevitably error prone. In this paper we present an automated data conversion method for biomolecular simulations between molecular dynamics and quantum mechanics/molecular mechanics models. Our approach is developed around an XML data representation called BioSimML (Biomolecular Simulation Markup Language. BioSimML provides a domain specific data representation for biomolecular modelling which can effciently support data interoperability between different biomolecular simulation models and data formats.
Improved quantum circuit modelling based on Heisenberg representation
Lee, Y. H.; Khalil-Hani, M.; Marsono, M. N.
2018-02-01
Heisenberg model allows a more compact representation of certain quantum states and enables efficient modelling of stabilizer gates operation and single-qubit measurement in computational basis on classical computers. Since generic quantum circuit modelling appears intractable on classical computers, the Heisenberg representation that makes the modelling process at least practical for certain circuits is crucial. This paper proposes efficient algorithms to facilitate accurate global phase maintenance for both stabilizer and non-stabilizer gates application that play a vital role in the stabilizer frames data structure, which is based on the Heisenberg representation. The proposed algorithms are critical as maintaining global phase involves compute-intensive operations that are necessary for the modelling of each quantum gate. In addition, the proposed work overcomes the limitations of prior work where the phase factors due to non-stabilizer gates application was not taken into consideration. The verification of the proposed algorithms is made against the golden reference model that is constructed based on the conventional state vector approach.
A Fuzzy Knowledge Representation Model for Student Performance Assessment
DEFF Research Database (Denmark)
Badie, Farshad
Knowledge representation models based on Fuzzy Description Logics (DLs) can provide a foundation for reasoning in intelligent learning environments. While basic DLs are suitable for expressing crisp concepts and binary relationships, Fuzzy DLs are capable of processing degrees of truth/completene....../completeness about vague or imprecise information. This paper tackles the issue of representing fuzzy classes using OWL2 in a dataset describing Performance Assessment Results of Students (PARS)....
Kolb, Mark A.
1990-01-01
Viewgraphs on Rubber Airplane: Constraint-based Component-Modeling for Knowledge Representation in Computer Aided Conceptual Design are presented. Topics covered include: computer aided design; object oriented programming; airfoil design; surveillance aircraft; commercial aircraft; aircraft design; and launch vehicles.
A propositional representation model of anatomical and functional brain data.
Maturana, Pablo; Batrancourt, Bénédicte
2011-01-01
Networks can represent a large number of systems. Recent advances in the domain of networks have been transferred to the field of neuroscience. For example, the graph model has been used in neuroscience research as a methodological tool to examine brain networks organization, topology and complex dynamics, as well as a framework to test the structure-function hypothesis using neuroimaging data. In the current work we propose a graph-theoretical framework to represent anatomical, functional and neuropsychological assessment instruments information. On the one hand, interrelationships between anatomic elements constitute an anatomical graph. On the other hand, a functional graph contains several cognitive functions and their more elementary cognitive processes. Finally, the neuropsychological assessment instruments graph includes several neuropsychological tests and scales linked with their different sub-tests and variables. The two last graphs are connected by relations of type "explore" linking a particular instrument with the cognitive function it explores. We applied this framework to a sample of patients with focal brain damage. Each patient was related to: (i) the cerebral entities injured (assessed with structural neuroimaging data) and (ii) the neusopsychological assessment tests carried out (weight by performance). Our model offers a suitable platform to visualize patients' relevant information, facilitating the representation, standardization and sharing of clinical data. At the same time, the integration of a large number of patients in this framework will make possible to explore relations between anatomy (injured entities) and function (performance in different tests assessing different cognitive functions) and the use of neurocomputational tools for graph analysis may help diagnostic and contribute to the comprehension of neural bases of cognitive functions. Copyright © 2011 Elsevier Ltd. All rights reserved.
The cell representation of the three-band Hubbard model
Moskalenko, V A; Marinaro, M; Digor, D F; Grecu, D
2002-01-01
The d-p model is reformulated in the representation of the Wannier orthogonalized copper and oxygen orbitals. The exact account of the holes hybridization on the oxygen ions is accomplished in this work in contrast to the other ones. Two diagonalized fermion cells of the oxygen holes mode are used for this purpose alongside with the copper holes mode. These diagonalized modes are characterized by essentially different local energies, that noticeably affects the theory results. The noncommutation of the oxygen Hamiltonian diagonalization operation and the Wannier orbitals orthogonalization by the copper lattice nodes is noted. The cell orbital of the oxygen holes, related to the CuO sub 4 ion complex, proves to be the superposition of these two diagonalized orbitals on our approach. The obtained Hamiltonian constitutes the components sum, the members whereof have the different number of the copper lattice nodes indices. The local component is the high set one. All main states of the cluster representation are ...
The evaluative imaging of mental models - Visual representations of complexity
Dede, Christopher
1989-01-01
The paper deals with some design issues involved in building a system that could visually represent the semantic structures of training materials and their underlying mental models. In particular, hypermedia-based semantic networks that instantiate classification problem solving strategies are thought to be a useful formalism for such representations; the complexity of these web structures can be best managed through visual depictions. It is also noted that a useful approach to implement in these hypermedia models would be some metrics of conceptual distance.
Rees, Alice; Bott, Lewis
2017-01-01
Structural priming is a useful tool for investigating linguistics representations. We argue that structural priming can be extended to the investigation of pragmatic representations such as Gricean enrichments. That is not to say priming is without its limitations, however. Interpreting a failure to observe priming may not be as simple as Branigan & Pickering (B&P) imply.
Hattori, Masasi
2016-12-01
This paper presents a new theory of syllogistic reasoning. The proposed model assumes there are probabilistic representations of given signature situations. Instead of conducting an exhaustive search, the model constructs an individual-based "logical" mental representation that expresses the most probable state of affairs, and derives a necessary conclusion that is not inconsistent with the model using heuristics based on informativeness. The model is a unification of previous influential models. Its descriptive validity has been evaluated against existing empirical data and two new experiments, and by qualitative analyses based on previous empirical findings, all of which supported the theory. The model's behavior is also consistent with findings in other areas, including working memory capacity. The results indicate that people assume the probabilities of all target events mentioned in a syllogism to be almost equal, which suggests links between syllogistic reasoning and other areas of cognition. Copyright © 2016 The Author(s). Published by Elsevier B.V. All rights reserved.
The LUE data model for representation of agents and fields
de Jong, Kor; Schmitz, Oliver; Karssenberg, Derek
2017-04-01
Traditionally, agents-based and field-based modelling environments use different data models to represent the state of information they manipulate. In agent-based modelling, involving the representation of phenomena as objects bounded in space and time, agents are often represented by classes, each of which represents a particular kind of agent and all its properties. Such classes can be used to represent entities like people, birds, cars and countries. In field-based modelling, involving the representation of the environment as continuous fields, fields are often represented by a discretization of space, using multidimensional arrays, each storing mostly a single attribute. Such arrays can be used to represent the elevation of the land-surface, the pH of the soil, or the population density in an area, for example. Representing a population of agents by class instances grouped in collections is an intuitive way of organizing information. A drawback, though, is that models in which class instances grouping properties are stored in collections are less efficient (execute slower) than models in which collections of properties are grouped. The field representation, on the other hand, is convenient for the efficient execution of models. Another drawback is that, because the data models used are so different, integrating agent-based and field-based models becomes difficult, since the model builder has to deal with multiple concepts, and often multiple modelling environments. With the development of the LUE data model [1] we aim at representing agents and fields within a single paradigm, by combining the advantages of the data models used in agent-based and field-based data modelling. This removes the barrier for writing integrated agent-based and field-based models. The resulting data model is intuitive to use and allows for efficient execution of models. LUE is both a high-level conceptual data model and a low-level physical data model. The LUE conceptual data model is
MODELING OF DYNAMIC SYSTEMS WITH MODULATION BY MEANS OF KRONECKER VECTOR-MATRIX REPRESENTATION
Directory of Open Access Journals (Sweden)
A. S. Vasilyev
2015-09-01
Full Text Available The paper deals with modeling of dynamic systems with modulation by the possibilities of state-space method. This method, being the basis of modern control theory, is based on the possibilities of vector-matrix formalism of linear algebra and helps to solve various problems of technical control of continuous and discrete nature invariant with respect to the dimension of their “input-output” objects. Unfortunately, it turned its back on the wide group of control systems, which hardware environment modulates signals. The marked system deficiency is partially offset by this paper, which proposes Kronecker vector-matrix representations for purposes of system representation of processes with signal modulation. The main result is vector-matrix representation of processes with modulation with no formal difference from continuous systems. It has been found that abilities of these representations could be effectively used in research of systems with modulation. Obtained model representations of processes with modulation are best adapted to the state-space method. These approaches for counting eigenvalues of Kronecker matrix summaries, that are matrix basis of model representations of processes described by Kronecker vector products, give the possibility to use modal direction in research of dynamics for systems with modulation. It is shown that the use of controllability for eigenvalues of general matrixes applied to Kronecker structures enabled to divide successfully eigenvalue spectrum into directed and not directed components. Obtained findings including design problems for models of dynamic processes with modulation based on the features of Kronecker vector and matrix structures, invariant with respect to the dimension of input-output relations, are applicable in the development of alternate current servo drives.
Time representation in reinforcement learning models of the basal ganglia
Directory of Open Access Journals (Sweden)
Samuel Joseph Gershman
2014-01-01
Full Text Available Reinforcement learning models have been influential in understanding many aspects of basal ganglia function, from reward prediction to action selection. Time plays an important role in these models, but there is still no theoretical consensus about what kind of time representation is used by the basal ganglia. We review several theoretical accounts and their supporting evidence. We then discuss the relationship between reinforcement learning models and the timing mechanisms that have been attributed to the basal ganglia. We hypothesize that a single computational system may underlie both reinforcement learning and interval timing—the perception of duration in the range of seconds to hours. This hypothesis, which extends earlier models by incorporating a time-sensitive action selection mechanism, may have important implications for understanding disorders like Parkinson's disease in which both decision making and timing are impaired.
Taher, M.; Hamidah, I.; Suwarma, I. R.
2017-09-01
This paper outlined the results of an experimental study on the effects of multi-representation approach in learning Archimedes Law on students’ mental model improvement. The multi-representation techniques implemented in the study were verbal, pictorial, mathematical, and graphical representations. Students’ mental model was classified into three levels, i.e. scientific, synthetic, and initial levels, based on the students’ level of understanding. The present study employed the pre-experimental methodology, using one group pretest-posttest design. The subject of the study was 32 eleventh grade students in a Public Senior High School in Riau Province. The research instrument included model mental test on hydrostatic pressure concept, in the form of essay test judged by experts. The findings showed that there was positive change in students’ mental model, indicating that multi-representation approach was effective to improve students’ mental model.
Olkiluoto surface hydrological modelling: Update 2012 including salt transport modelling
International Nuclear Information System (INIS)
Karvonen, T.
2013-11-01
Posiva Oy is responsible for implementing a final disposal program for spent nuclear fuel of its owners Teollisuuden Voima Oyj and Fortum Power and Heat Oy. The spent nuclear fuel is planned to be disposed at a depth of about 400-450 meters in the crystalline bedrock at the Olkiluoto site. Leakages located at or close to spent fuel repository may give rise to the upconing of deep highly saline groundwater and this is a concern with regard to the performance of the tunnel backfill material after the closure of the tunnels. Therefore a salt transport sub-model was added to the Olkiluoto surface hydrological model (SHYD). The other improvements include update of the particle tracking algorithm and possibility to estimate the influence of open drillholes in a case where overpressure in inflatable packers decreases causing a hydraulic short-circuit between hydrogeological zones HZ19 and HZ20 along the drillhole. Four new hydrogeological zones HZ056, HZ146, BFZ100 and HZ039 were added to the model. In addition, zones HZ20A and HZ20B intersect with each other in the new structure model, which influences salinity upconing caused by leakages in shafts. The aim of the modelling of long-term influence of ONKALO, shafts and repository tunnels provide computational results that can be used to suggest limits for allowed leakages. The model input data included all the existing leakages into ONKALO (35-38 l/min) and shafts in the present day conditions. The influence of shafts was computed using eight different values for total shaft leakage: 5, 11, 20, 30, 40, 50, 60 and 70 l/min. The selection of the leakage criteria for shafts was influenced by the fact that upconing of saline water increases TDS-values close to the repository areas although HZ20B does not intersect any deposition tunnels. The total limit for all leakages was suggested to be 120 l/min. The limit for HZ20 zones was proposed to be 40 l/min: about 5 l/min the present day leakages to access tunnel, 25 l/min from
Can representational trajectory reveal the nature of an internal model of gravity?
De Sá Teixeira, Nuno; Hecht, Heiko
2014-05-01
The memory for the vanishing location of a horizontally moving target is usually displaced forward in the direction of motion (representational momentum) and downward in the direction of gravity (representational gravity). Moreover, this downward displacement has been shown to increase with time (representational trajectory). However, the degree to which different kinematic events change the temporal profile of these displacements remains to be determined. The present article attempts to fill this gap. In the first experiment, we replicate the finding that representational momentum for downward-moving targets is bigger than for upward motions, showing, moreover, that it increases rapidly during the first 300 ms, stabilizing afterward. This temporal profile, but not the increased error for descending targets, is shown to be disrupted when eye movements are not allowed. In the second experiment, we show that the downward drift with time emerges even for static targets. Finally, in the third experiment, we report an increased error for upward-moving targets, as compared with downward movements, when the display is compatible with a downward ego-motion by including vection cues. Thus, the errors in the direction of gravity are compatible with the perceived event and do not merely reflect a retinotopic bias. Overall, these results provide further evidence for an internal model of gravity in the visual representational system.
Sparse Representation Based Binary Hypothesis Model for Hyperspectral Image Classification
Directory of Open Access Journals (Sweden)
Yidong Tang
2016-01-01
Full Text Available The sparse representation based classifier (SRC and its kernel version (KSRC have been employed for hyperspectral image (HSI classification. However, the state-of-the-art SRC often aims at extended surface objects with linear mixture in smooth scene and assumes that the number of classes is given. Considering the small target with complex background, a sparse representation based binary hypothesis (SRBBH model is established in this paper. In this model, a query pixel is represented in two ways, which are, respectively, by background dictionary and by union dictionary. The background dictionary is composed of samples selected from the local dual concentric window centered at the query pixel. Thus, for each pixel the classification issue becomes an adaptive multiclass classification problem, where only the number of desired classes is required. Furthermore, the kernel method is employed to improve the interclass separability. In kernel space, the coding vector is obtained by using kernel-based orthogonal matching pursuit (KOMP algorithm. Then the query pixel can be labeled by the characteristics of the coding vectors. Instead of directly using the reconstruction residuals, the different impacts the background dictionary and union dictionary have on reconstruction are used for validation and classification. It enhances the discrimination and hence improves the performance.
High dimensional model representation method for fuzzy structural dynamics
Adhikari, S.; Chowdhury, R.; Friswell, M. I.
2011-03-01
Uncertainty propagation in multi-parameter complex structures possess significant computational challenges. This paper investigates the possibility of using the High Dimensional Model Representation (HDMR) approach when uncertain system parameters are modeled using fuzzy variables. In particular, the application of HDMR is proposed for fuzzy finite element analysis of linear dynamical systems. The HDMR expansion is an efficient formulation for high-dimensional mapping in complex systems if the higher order variable correlations are weak, thereby permitting the input-output relationship behavior to be captured by the terms of low-order. The computational effort to determine the expansion functions using the α-cut method scales polynomically with the number of variables rather than exponentially. This logic is based on the fundamental assumption underlying the HDMR representation that only low-order correlations among the input variables are likely to have significant impacts upon the outputs for most high-dimensional complex systems. The proposed method is first illustrated for multi-parameter nonlinear mathematical test functions with fuzzy variables. The method is then integrated with a commercial finite element software (ADINA). Modal analysis of a simplified aircraft wing with fuzzy parameters has been used to illustrate the generality of the proposed approach. In the numerical examples, triangular membership functions have been used and the results have been validated against direct Monte Carlo simulations. It is shown that using the proposed HDMR approach, the number of finite element function calls can be reduced without significantly compromising the accuracy.
Representations of the Virasoro algebra from lattice models
International Nuclear Information System (INIS)
Koo, W.M.; Saleur, H.
1994-01-01
We investigate in detail how the Virasoro algebra appears in the scaling limit of the simplest lattice models of XXZ or RSOS type. Our approach is straightforward but to our knowledge had never been tried so far. We simply formulate a conjecture for the lattice stress-energy tensor motivated by the exact derivation of lattice global Ward identities. We then check that the proper algebraic relations are obeyed in the scaling limit. The latter is under reasonable control thanks to the Bethe-ansatz solution. The results, which are mostly numerical for technical reasons, are remarkably precise. They are also corroborated by exact pieces of information from various sources, in particular Temperley-Lieb algebra representation theory. Most features of the Virasoro algebra (like central term, null vectors, metric properties, etc.) can thus be observed using the lattice models. This seems of general interest for lattice field theory, and also more specifically for finding relations between conformal invariance and lattice integrability, since a basis for the irreducible representations of the Virasoro algebra should now follow (at least in principle) from Bethe-ansatz computations. ((orig.))
Evaluation, Use, and Refinement of Knowledge Representations through Acquisition Modeling
Pearl, Lisa
2017-01-01
Generative approaches to language have long recognized the natural link between theories of knowledge representation and theories of knowledge acquisition. The basic idea is that the knowledge representations provided by Universal Grammar enable children to acquire language as reliably as they do because these representations highlight the…
Kitaev honeycomb model. Majorana fermion representation and disorder
International Nuclear Information System (INIS)
Zschocke, Fabian
2016-01-01
Many interesting phenomena in quantum physics arise through the quantum mechanical interaction of a large number of particles. In most cases describing the relevant physical properties is extremely difficult, because the complexity of the system increases exponentially with the number of interacting particles and solving the underlying Schroedinger equation becomes impossible. Nevertheless, our understanding of complex phenomena has progressed through some groundbreaking discoveries in the history of condensed matter physics. Examples include the development of Landau's theory of Fermi liquids, the BCS theory of superconductivity, the theory of superfluidity and the theory of the fractional quantum Hall effect. In all these cases a theoretical understanding was achieved with so-called quasi-particles. Instead of explaining a phenomenon through the behavior of fundamental particles, such as electrons, the corresponding properties can be described by the simple behavior of quasi-particles, which are themselves a result of the complex collective interaction. One of the rare examples, where a strongly correlated quantum mechanical problem can be solved analytical, is the Kitaev model. It describes interacting spins on a honeycomb lattice and exhibits a spin liquid ground state. Here the solution was achieved by means of certain quasi-particles, called Majorana fermions. However, it has not been possible to clearly identify such a spin liquid experimentally, because its defining feature is the absence of any conventional order, in particular magnetic order. In contrast, the observation of quasiparticle excitations may hint at the nature of the ground state. But also a definite detection of Majorana fermions in any kind of system remains one of the outstanding issues in modern condensed matter physics. Therefore this thesis is devoted to the question how such quasiparticles may be found experimentally. For this reason we study the influence of disorder on the states
Procedures and Methods of Digital Modeling in Representation Didactics
La Mantia, M.
2011-09-01
At the Bachelor degree course in Engineering/Architecture of the University "La Sapienza" of Rome, the courses of Design and Survey, in addition to considering the learning of methods of representation, the application of descriptive geometry and survey, in order to expand the vision and spatial conception of the student, pay particular attention to the use of information technology for the preparation of design and survey drawings, achieving their goals through an educational path of "learning techniques, procedures and methods of modeling architectural structures." The fields of application involved two different educational areas: the analysis and that of survey, both from the acquisition of the given metric (design or survey) to the development of three-dimensional virtual model.
Metric versus observable operator representation, higher spin models
Fring, Andreas; Frith, Thomas
2018-02-01
We elaborate further on the metric representation that is obtained by transferring the time-dependence from a Hermitian Hamiltonian to the metric operator in a related non-Hermitian system. We provide further insight into the procedure on how to employ the time-dependent Dyson relation and the quasi-Hermiticity relation to solve time-dependent Hermitian Hamiltonian systems. By solving both equations separately we argue here that it is in general easier to solve the former. We solve the mutually related time-dependent Schrödinger equation for a Hermitian and non-Hermitian spin 1/2, 1 and 3/2 model with time-independent and time-dependent metric, respectively. In all models the overdetermined coupled system of equations for the Dyson map can be decoupled algebraic manipulations and reduces to simple linear differential equations and an equation that can be converted into the non-linear Ermakov-Pinney equation.
Cherkasskaya, Eugenia; Rosario, Margaret
2017-11-01
The etiology of low female sexual desire, the most prevalent sexual complaint in women, is multi-determined, implicating biological and psychological factors, including women's early parent-child relationships and bodily self-representations. The current study evaluated a model that hypothesized that sexual body self-representations (sexual subjectivity, self-objectification, genital self-image) explain (i.e., mediate) the relation between internalized working models of parent-child relationships (attachment, separation-individuation, parental identification) and sexual desire in heterosexual women. We recruited 614 young, heterosexual women (M = 25.5 years, SD = 4.63) through social media. The women completed an online survey. Structural equation modeling was used. The hypotheses were supported in that the relation between internalized working models of parent-child relationships (attachment and separation-individuation) and sexual desire was mediated by sexual body self-representations (sexual body esteem, self-objectification, genital self-image). However, parental identification was not related significantly to sexual body self-representations or sexual desire in the model. Current findings demonstrated that understanding female sexual desire necessitates considering women's internalized working models of early parent-child relationships and their experiences of their bodies in a sexual context. Treatment of low or absent desire in women would benefit from modalities that emphasize early parent-child relationships as well as interventions that foster mind-body integration.
Representation of an open repository in groundwater flow models
International Nuclear Information System (INIS)
Painter, Scott; Sun, Alexander
2005-08-01
The effect of repository tunnels on groundwater flow has been identified as a potential issue for the nuclear waste repository being considered by SKB for a fractured granite formation in Sweden. In particular, the following pre-closure and post-closure processes have been identified as being important: inflows into open tunnels as functions of estimated grouting efficiencies, drawdown of the water table in the vicinity of the repository, upcoming of saline water, 'turnover' of surface water in the upper bedrock, and resaturation of backfilled tunnels following repository closure. The representation of repository tunnels within groundwater models is addressed in this report. The primary focus is on far-field flow that is modeled with a continuum porous medium approximation. Of particular interest are the consequences of the tunnel representation on the transient response of the groundwater system to repository operations and repository closure, as well as modeling issues such as how the water-table free surface and the coupling to near-surface hydrogeology should be handled. The overall objectives are to understand the consequences of current representations and to identify appropriate approximations for representing open tunnels in future groundwater modeling studies. The following conclusions can be drawn from the results of the simulations: 1. Two-phase flow may be induced in the vicinity of repository tunnels during repository pre-closure operations, but the formation of a two-phase flow region will not significantly affect far-field flow or inflows into tunnels. 2. The water table will be drawn down to the repository horizon and tunnel inflows will reach a steady-state value within about 5 years. 3. Steady-state inflows at the repository edge are estimated to be about 250 m 3 /year per meter of tunnel. Inflows will be greater during the transient de-watering period and less for tunnel locations closer to the repository center. 4. Significant amounts of water
Representation of an open repository in groundwater flow models
Energy Technology Data Exchange (ETDEWEB)
Painter, Scott; Sun, Alexander [Southwest Research Inst., San Antonio, TX (United States). Center for Nuclear Waste Regulatory Analyses
2005-08-01
The effect of repository tunnels on groundwater flow has been identified as a potential issue for the nuclear waste repository being considered by SKB for a fractured granite formation in Sweden. In particular, the following pre-closure and post-closure processes have been identified as being important: inflows into open tunnels as functions of estimated grouting efficiencies, drawdown of the water table in the vicinity of the repository, upcoming of saline water, 'turnover' of surface water in the upper bedrock, and resaturation of backfilled tunnels following repository closure. The representation of repository tunnels within groundwater models is addressed in this report. The primary focus is on far-field flow that is modeled with a continuum porous medium approximation. Of particular interest are the consequences of the tunnel representation on the transient response of the groundwater system to repository operations and repository closure, as well as modeling issues such as how the water-table free surface and the coupling to near-surface hydrogeology should be handled. The overall objectives are to understand the consequences of current representations and to identify appropriate approximations for representing open tunnels in future groundwater modeling studies. The following conclusions can be drawn from the results of the simulations: 1. Two-phase flow may be induced in the vicinity of repository tunnels during repository pre-closure operations, but the formation of a two-phase flow region will not significantly affect far-field flow or inflows into tunnels. 2. The water table will be drawn down to the repository horizon and tunnel inflows will reach a steady-state value within about 5 years. 3. Steady-state inflows at the repository edge are estimated to be about 250 m{sup 3}/year per meter of tunnel. Inflows will be greater during the transient de-watering period and less for tunnel locations closer to the repository center. 4. Significant
RAILWAY TRACK REPRESENTATION IN MATHEMATICAL MODEL OF VEHICLES MOVEMENT
Directory of Open Access Journals (Sweden)
M. B. Kurhan
2017-12-01
Full Text Available Purpose. The tasks of modeling the interaction of track and rolling stock are basic ones for most areas of mo-dern scientific research of railway transport. The compilation of the model by the principle of Lagrange d'Alembert has found a very wide application for solving the problems of rolling stock dynamics. Representation of the railway track in the model of crew movement can be implemented in several ways, which, among other things, will differ in detail. The purpose of this work is to create a methodology for representing the railway track in mathematical mo-dels of interaction with rolling stock and obtaining practical results for different characteristics and design of the track and the level of maximum speed. Methodology. The problem consists of determining such characteristics of the path as the reduced mass, the stiffness coefficient, and the dissipation coefficient. As a tool for solving this problem it was used the model of the stress-strain behavior of the railway track based on the joint use of the elastic wave propagation equations to describe the geometry of the outline of the part of the system space that is involved in the interaction at a given time and the equations of dynamic equilibrium of its deformation. This makes it possible to take into account the dynamics of the deflection of the under-rail base, which is especially important for the conditions of passenger traffic, which can be carried out at high speed. Findings. Theoretically justified stiffness and dissipation coefficients of the railway track for calculating the dynamics of rolling stock in modern models based on systems of equations in accordance with the Lagrange d'Alembert principle are obtained. The established va-lues, in contrast to those given in other sources, have a reasonable dependence on the design of the path and the speed of movement. Originality. The approaches of railroad track representation in models of rolling stock described by systems of
Advanced techniques in reliability model representation and solution
Palumbo, Daniel L.; Nicol, David M.
1992-01-01
The current tendency of flight control system designs is towards increased integration of applications and increased distribution of computational elements. The reliability analysis of such systems is difficult because subsystem interactions are increasingly interdependent. Researchers at NASA Langley Research Center have been working for several years to extend the capability of Markov modeling techniques to address these problems. This effort has been focused in the areas of increased model abstraction and increased computational capability. The reliability model generator (RMG) is a software tool that uses as input a graphical object-oriented block diagram of the system. RMG uses a failure-effects algorithm to produce the reliability model from the graphical description. The ASSURE software tool is a parallel processing program that uses the semi-Markov unreliability range evaluator (SURE) solution technique and the abstract semi-Markov specification interface to the SURE tool (ASSIST) modeling language. A failure modes-effects simulation is used by ASSURE. These tools were used to analyze a significant portion of a complex flight control system. The successful combination of the power of graphical representation, automated model generation, and parallel computation leads to the conclusion that distributed fault-tolerant system architectures can now be analyzed.
Separated representations and PGD-based model reduction fundamentals and applications
Ladevèze, Pierre
2014-01-01
The papers in this volume start with a description of the construction of reduced models through a review of Proper Orthogonal Decomposition (POD) and reduced basis models, including their mathematical foundations and some challenging applications, then followed by a description of a new generation of simulation strategies based on the use of separated representations (space-parameters, space-time, space-time-parameters, space-space,…), which have led to what is known as Proper Generalized Decomposition (PGD) techniques. The models can be enriched by treating parameters as additional coordinates, leading to fast and inexpensive online calculations based on richer offline parametric solutions. Separated representations are analyzed in detail in the course, from their mathematical foundations to their most spectacular applications. It is also shown how such an approximation could evolve into a new paradigm in computational science, enabling one to circumvent various computational issues in a vast array of...
Peebles, David; Cheng, Peter C H
2003-01-01
We report an investigation into the processes involved in a common graph-reading task using two types of Cartesian graph. We describe an experiment and eye movement study, the results of which show that optimal scan paths assumed in the task analysis approximate the detailed sequences of saccades made by individuals. The research demonstrates the computational inequivalence of two sets of informationally equivalent graphs and illustrates how the computational advantages of a representation outweigh factors such as user unfamiliarity. We describe two models, using the ACT rational perceptual motor (ACT-R/PM) cognitive architecture, that replicate the pattern of observed response latencies and the complex scan paths revealed by the eye movement study. Finally, we outline three guidelines for designers of visual displays: Designers should (a) consider how different quantities are encoded within any chosen representational format, (b) consider the full range of alternative varieties of a given task, and (c) balance the cost of familiarization with the computational advantages of less familiar representations. Actual or potential applications of this research include informing the design and selection of appropriate visual displays and illustrating the practice and utility of task analysis, eye tracking, and cognitive modeling for understanding interactive tasks with external representations.
DEFF Research Database (Denmark)
Knudsen, Hans
1995-01-01
in the stator. A consistent method is developed to determine model parameters from standard machine data. A phasor model of the line commutated converter is presented. The converter model includes not only the fundamental frequency, but also any chosen number of harmonics without a representation of the single...
2016-01-05
Computer-aided transformation of PDE models: languages, representations, and a calculus of operations A domain-specific embedded language called...languages, representations, and a calculus of operations Report Title A domain-specific embedded language called ibvp was developed to model initial...Computer-aided transformation of PDE models: languages, representations, and a calculus of operations 1 Vision and background Physical and engineered systems
Improving the Representation of Soluble Iron in Climate Models
Energy Technology Data Exchange (ETDEWEB)
Perez Garcia-Pando, Carlos [Columbia Univ., New York, NY (United States)
2016-03-13
attached to aggregates of other minerals. This is another challenge that has been tackled by the project. The project has produced a major step forward on our understanding of the key processes needed to predict the mineral composition of dust aerosols by connecting theory, modeling and observations. The project has produced novel semi-empirical and theoretical methods to estimate the emitted size distribution and mineral composition of dust aerosols. These methods account for soil aggregates that are potentially emitted from the original undisturbed soil but are destroyed during wet sieving. The methods construct the emitted size distribution of individual minerals building upon brittle fragmentation theory, reconstructions of wet-sieved soil mineral size distributions, and/or characteristic mineral size distributions estimated from observations at times of high concentration. Based on an unprecedented evaluation with a new global compilation of observations produced with the project support, we showed that the new methods remedy some key deficiencies compared to the previous state-of-the-art. This includes the correct representation of Fe-bearing phyllosilicates at silt sizes, where they are abundant according to observations. In addition, the quartz fraction of silt particles is in better agreement with measured values. In addition, we represent an additional class of iron oxide aerosol that is a small impurity embedded within other minerals, allowing it to travel farther than in its pure crystalline state. We assume that these impurities are least frequent in soils rich in iron oxides (as a result of the assumed effect of weathering that creates pure iron oxide crystals). The mineral composition of dust is also important to other interaction with climate - through shortwave absorption and radiative forcing, nucleation of cloud droplets and ice crystals, and the heterogeneous formation of sulfates and nitrates - and to its impacts upon human health. Despite the
Grms or graphical representation of model spaces. Vol. I Basics
International Nuclear Information System (INIS)
Duch, W.
1986-01-01
This book presents a novel approach to the many-body problem in quantum chemistry, nuclear shell-theory and solid-state theory. Many-particle model spaces are visualized using graphs, each path of a graph labeling a single basis function or a subspace of functions. Spaces of a very high dimension are represented by small graphs. Model spaces have structure that is reflected in the architecture of the corresponding graphs, that in turn is reflected in the structure of the matrices corresponding to operators acting in these spaces. Insight into this structure leads to formulation of very efficient computer algorithms. Calculation of matrix elements is reduced to comparison of paths in a graph, without ever looking at the functions themselves. Using only very rudimentary mathematical tools graphical rules of matrix element calculation in abelian cases are derived, in particular segmentation rules obtained in the unitary group approached are rederived. The graphs are solutions of Diophantine equations of the type appearing in different branches of applied mathematics. Graphical representation of model spaces should find as many applications as has been found for diagramatical methods in perturbation theory
Prather, Edward
2018-01-01
Astronomy education researchers in the Department of Astronomy at the University of Arizona have been investigating a new framework for getting students to engage in discussions about fundamental astronomy topics. This framework is intended to also provide students with explicit feedback on the correctness and coherency of their mental models on these topics. This framework builds upon our prior efforts to create productive Pedagogical Discipline Representations (PDR). Students are asked to work collaboratively to generate their own representations (drawings, graphs, data tables, etc.) that reflect important characteristics of astrophysical scenarios presented in class. We have found these representation tasks offer tremendous insight into the broad range of ideas and knowledge students possess after instruction that includes both traditional lecture and actively learning strategies. In particular, we find that some of our students are able to correctly answer challenging multiple-choice questions on topics, however, they struggle to accurately create representations of these same topics themselves. Our work illustrates that some of our students are not developing a robust level of discipline fluency with many core ideas in astronomy, even after engaging with active learning strategies.
Injury representation against ballistic threats using three novel numerical models.
Breeze, Johno; Fryer, R; Pope, D; Clasper, J
2017-06-01
Injury modelling of ballistic threats is a valuable tool for informing policy on personal protective equipment and other injury mitigation methods. Currently, the Ministry of Defence (MoD) and Centre for Protection of National Infrastructure (CPNI) are focusing on the development of three interlinking numerical models, each of a different fidelity, to answer specific questions on current threats. High-fidelity models simulate the physical events most realistically, and will be used in the future to test the medical effectiveness of personal armour systems. They are however generally computationally intensive, slow running and much of the experimental data to base their algorithms on do not yet exist. Medium fidelity models, such as the personnel vulnerability simulation (PVS), generally use algorithms based on physical or engineering estimations of interaction. This enables a reasonable representation of reality and greatly speeds up runtime allowing full assessments of the entire body area to be undertaken. Low-fidelity models such as the human injury predictor (HIP) tool generally use simplistic algorithms to make injury predictions. Individual scenarios can be run very quickly and hence enable statistical casualty assessments of large groups, where significant uncertainty concerning the threat and affected population exist. HIP is used to simulate the blast and penetrative fragmentation effects of a terrorist detonation of an improvised explosive device within crowds of people in metropolitan environments. This paper describes the collaboration between MoD and CPNI using an example of all three fidelities of injury model and to highlight future areas of research that are required. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.
Dynamic hysteresis modeling including skin effect using diffusion equation model
Energy Technology Data Exchange (ETDEWEB)
Hamada, Souad, E-mail: souadhamada@yahoo.fr [LSP-IE: Research Laboratory, Electrical Engineering Department, University of Batna, 05000 Batna (Algeria); Louai, Fatima Zohra, E-mail: fz_louai@yahoo.com [LSP-IE: Research Laboratory, Electrical Engineering Department, University of Batna, 05000 Batna (Algeria); Nait-Said, Nasreddine, E-mail: n_naitsaid@yahoo.com [LSP-IE: Research Laboratory, Electrical Engineering Department, University of Batna, 05000 Batna (Algeria); Benabou, Abdelkader, E-mail: Abdelkader.Benabou@univ-lille1.fr [L2EP, Université de Lille1, 59655 Villeneuve d’Ascq (France)
2016-07-15
An improved dynamic hysteresis model is proposed for the prediction of hysteresis loop of electrical steel up to mean frequencies, taking into account the skin effect. In previous works, the analytical solution of the diffusion equation for low frequency (DELF) was coupled with the inverse static Jiles-Atherton (JA) model in order to represent the hysteresis behavior for a lamination. In the present paper, this approach is improved to ensure the reproducibility of measured hysteresis loops at mean frequency. The results of simulation are compared with the experimental ones. The selected results for frequencies 50 Hz, 100 Hz, 200 Hz and 400 Hz are presented and discussed.
Robust visual tracking of infrared object via sparse representation model
Ma, Junkai; Liu, Haibo; Chang, Zheng; Hui, Bin
2014-11-01
In this paper, we propose a robust tracking method for infrared object. We introduce the appearance model and the sparse representation in the framework of particle filter to achieve this goal. Representing every candidate image patch as a linear combination of bases in the subspace which is spanned by the target templates is the mechanism behind this method. The natural property, that if the candidate image patch is the target so the coefficient vector must be sparse, can ensure our algorithm successfully. Firstly, the target must be indicated manually in the first frame of the video, then construct the dictionary using the appearance model of the target templates. Secondly, the candidate image patches are selected in following frames and the sparse coefficient vectors of them are calculated via l1-norm minimization algorithm. According to the sparse coefficient vectors the right candidates is determined as the target. Finally, the target templates update dynamically to cope with appearance change in the tracking process. This paper also addresses the problem of scale changing and the rotation of the target occurring in tracking. Theoretic analysis and experimental results show that the proposed algorithm is effective and robust.
Stochastic modelling of two-phase flows including phase change
International Nuclear Information System (INIS)
Hurisse, O.; Minier, J.P.
2011-01-01
Stochastic modelling has already been developed and applied for single-phase flows and incompressible two-phase flows. In this article, we propose an extension of this modelling approach to two-phase flows including phase change (e.g. for steam-water flows). Two aspects are emphasised: a stochastic model accounting for phase transition and a modelling constraint which arises from volume conservation. To illustrate the whole approach, some remarks are eventually proposed for two-fluid models. (authors)
Modeling of the Direct Current Generator Including the Magnetic Saturation and Temperature Effects
Directory of Open Access Journals (Sweden)
Alfonso J. Mercado-Samur
2013-11-01
Full Text Available In this paper the inclusion of temperature effect on the field resistance on the direct current generator model DC1A, which is valid to stability studies is proposed. First, the linear generator model is presented, after the effect of magnetic saturation and the change in the resistance value due to temperature produced by the field current are included. The comparison of experimental results and model simulations to validate the model is used. A direct current generator model which is a better representation of the generator is obtained. Visual comparison between simulations and experimental results shows the success of the proposed model, because it presents the lowest error of the compared models. The accuracy of the proposed model is observed via Modified Normalized Sum of Squared Errors index equal to 3.8979%.
Verbeek, F. J.; de Groot, M. M.; Huijsmans, D. P.; Lamers, W. H.; Young, I. T.
1993-01-01
In this paper we discuss a geometrical data base that includes three different geometrical representations of one and the same reconstructed 3D shape: the contour-pile, the voxel enumeration, and the triangulation of a surface. The data base is tailored for 3D shapes obtained from plan-parallel
Modeling Electric Double-Layers Including Chemical Reaction Effects
DEFF Research Database (Denmark)
Paz-Garcia, Juan Manuel; Johannesson, Björn; Ottosen, Lisbeth M.
2014-01-01
A physicochemical and numerical model for the transient formation of an electric double-layer between an electrolyte and a chemically-active flat surface is presented, based on a finite elements integration of the nonlinear Nernst-Planck-Poisson model including chemical reactions. The model works...
Multiscale geometric modeling of macromolecules I: Cartesian representation
Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei
2014-01-01
This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace-Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the
Integer Representations towards Efficient Counting in the Bit Probe Model
DEFF Research Database (Denmark)
Brodal, Gerth Stølting; Greve, Mark; Pandey, Vineet
2011-01-01
Abstract We consider the problem of representing numbers in close to optimal space and supporting increment, decrement, addition and subtraction operations efficiently. We study the problem in the bit probe model and analyse the number of bits read and written to perform the operations, both...... in the worst-case and in the average-case. A counter is space-optimal if it represents any number in the range [0,...,2 n − 1] using exactly n bits. We provide a space-optimal counter which supports increment and decrement operations by reading at most n − 1 bits and writing at most 3 bits in the worst......-case. To the best of our knowledge, this is the first such representation which supports these operations by always reading strictly less than n bits. For redundant counters where we only need to represent numbers in the range [0,...,L] for some integer L bits, we define the efficiency...
Visualization Through Knowledge Representation Model for Social Networks
DEFF Research Database (Denmark)
Hussain, Dil Muhammad Akbar; Athar Javed, Muhammad; Ahmed, Zaki
2011-01-01
the process of knowing, learning and creating knowledge is the relevant aspect (Nonaka and Takeuchi 1995). In this paper knowledge representation is presented in 3D style for the understanding and visualization of dynamics of complex social networks by developing a TANetworkTool (Task Analysis Network Tool......). The standard or normal representation of a typical social network is through a graph data structure in 2D. The dynamics of larger social networks is so complex some time it becomes difficult to understand the various levels of interactions and dependencies just by mere representation through a tree or graph...... of complex social networks and complimenting the analytical results. This representation can also help authorities not necessarily having specific scientific background to understand and perhaps take preventive actions required in certain specific scenarios for example dealing with terrorist/covert networks....
Modeling late rectal toxicities based on a parameterized representation of the 3D dose distribution
Buettner, Florian; Gulliford, Sarah L.; Webb, Steve; Partridge, Mike
2011-04-01
Many models exist for predicting toxicities based on dose-volume histograms (DVHs) or dose-surface histograms (DSHs). This approach has several drawbacks as firstly the reduction of the dose distribution to a histogram results in the loss of spatial information and secondly the bins of the histograms are highly correlated with each other. Furthermore, some of the complex nonlinear models proposed in the past lack a direct physical interpretation and the ability to predict probabilities rather than binary outcomes. We propose a parameterized representation of the 3D distribution of the dose to the rectal wall which explicitly includes geometrical information in the form of the eccentricity of the dose distribution as well as its lateral and longitudinal extent. We use a nonlinear kernel-based probabilistic model to predict late rectal toxicity based on the parameterized dose distribution and assessed its predictive power using data from the MRC RT01 trial (ISCTRN 47772397). The endpoints under consideration were rectal bleeding, loose stools, and a global toxicity score. We extract simple rules identifying 3D dose patterns related to a specifically low risk of complication. Normal tissue complication probability (NTCP) models based on parameterized representations of geometrical and volumetric measures resulted in areas under the curve (AUCs) of 0.66, 0.63 and 0.67 for predicting rectal bleeding, loose stools and global toxicity, respectively. In comparison, NTCP models based on standard DVHs performed worse and resulted in AUCs of 0.59 for all three endpoints. In conclusion, we have presented low-dimensional, interpretable and nonlinear NTCP models based on the parameterized representation of the dose to the rectal wall. These models had a higher predictive power than models based on standard DVHs and their low dimensionality allowed for the identification of 3D dose patterns related to a low risk of complication.
Modeling late rectal toxicities based on a parameterized representation of the 3D dose distribution
Energy Technology Data Exchange (ETDEWEB)
Buettner, Florian; Gulliford, Sarah L; Webb, Steve; Partridge, Mike, E-mail: florian.buttner@icr.ac.uk [Joint Department of Physics, Institute of Cancer Research and Royal Marsden NHS Foundation Trust, Sutton, Surrey SM2 5PT (United Kingdom)
2011-04-07
Many models exist for predicting toxicities based on dose-volume histograms (DVHs) or dose-surface histograms (DSHs). This approach has several drawbacks as firstly the reduction of the dose distribution to a histogram results in the loss of spatial information and secondly the bins of the histograms are highly correlated with each other. Furthermore, some of the complex nonlinear models proposed in the past lack a direct physical interpretation and the ability to predict probabilities rather than binary outcomes. We propose a parameterized representation of the 3D distribution of the dose to the rectal wall which explicitly includes geometrical information in the form of the eccentricity of the dose distribution as well as its lateral and longitudinal extent. We use a nonlinear kernel-based probabilistic model to predict late rectal toxicity based on the parameterized dose distribution and assessed its predictive power using data from the MRC RT01 trial (ISCTRN 47772397). The endpoints under consideration were rectal bleeding, loose stools, and a global toxicity score. We extract simple rules identifying 3D dose patterns related to a specifically low risk of complication. Normal tissue complication probability (NTCP) models based on parameterized representations of geometrical and volumetric measures resulted in areas under the curve (AUCs) of 0.66, 0.63 and 0.67 for predicting rectal bleeding, loose stools and global toxicity, respectively. In comparison, NTCP models based on standard DVHs performed worse and resulted in AUCs of 0.59 for all three endpoints. In conclusion, we have presented low-dimensional, interpretable and nonlinear NTCP models based on the parameterized representation of the dose to the rectal wall. These models had a higher predictive power than models based on standard DVHs and their low dimensionality allowed for the identification of 3D dose patterns related to a low risk of complication.
The representation of knowledge within model-based control systems
International Nuclear Information System (INIS)
Weygand, D.P.; Koul, R.
1987-01-01
The ability to represent knowledge is often considered essential to build systems with reasoning capabilities. In computer science, a good solution often depends on a good representation. The first step in development of most computer applications is selection of a representation for the input, output, and intermediate results that the program will operate upon. For applications in artificial intelligence, this initial choice of representation is especially important. This is because the possible representational paradigms are diverse and the forcing criteria for the choice are usually not clear in the beginning. Yet, the consequences of an inadequate choice can be devastating in the later state of a project if it is discovered that critical information cannot be encoded within the chosen representational paradigm. Problems arise when designing representational systems to support any kind of Knowledge-Base System, that is a computer system that uses knowledge to perform some task. The general case of knowledge-based systems can be thought of as reasoning agents applying knowledge to achieve goals. Artificial Intelligence (AI) research involves building computer systems to perform tasks of perception and reasoning, as well as storage and retrieval of data. The problem of automatically perceiving large patterns in data is a perceptual task that begins to be important for many expert systems applications. Most of AI research assumes that what needs to be represented is known a priori; an AI researcher's job is just figuring out how to encode the information in the system's data structure and procedures. 10 refs
Stull, Andrew T.; Hegarty, Mary
2016-01-01
This study investigated the development of representational competence among organic chemistry students by using 3D (concrete and virtual) models as aids for teaching students to translate between multiple 2D diagrams. In 2 experiments, students translated between different diagrams of molecules and received verbal feedback in 1 of the following 3…
T.A. Arentze (Theo); B.G.C. Dellaert (Benedict); C.G. Chorus (Casper)
2013-01-01
textabstractWe introduce an extension of the discrete choice model to take into account individuals’ mental representation of a choice problem. We argue that, especially in daily activity and travel choices, the activated needs of an individual have an influence on the benefits he or she pursues in
Including investment risk in large-scale power market models
DEFF Research Database (Denmark)
Lemming, Jørgen Kjærgaard; Meibom, P.
2003-01-01
can be included in large-scale partial equilibrium models of the power market. The analyses are divided into a part about risk measures appropriate for power market investors and a more technical part about the combination of a risk-adjustment model and a partial-equilibrium model. To illustrate...... the analyses quantitatively, a framework based on an iterative interaction between the equilibrium model and a separate risk-adjustment module was constructed. To illustrate the features of the proposed modelling approach we examined how uncertainty in demand and variable costs affects the optimal choice...
Sensitivity of mesoscale model urban boundary layer meteorology to the scale of urban representation
Directory of Open Access Journals (Sweden)
D. D. Flagg
2011-03-01
Full Text Available Mesoscale modeling of the urban boundary layer requires careful parameterization of the surface due to its heterogeneous morphology. Model estimated meteorological quantities, including the surface energy budget and canopy layer variables, will respond accordingly to the scale of representation. This study examines the sensitivity of the surface energy balance, canopy layer and boundary layer meteorology to the scale of urban surface representation in a real urban area (Detroit-Windsor (USA-Canada during several dry, cloud-free summer periods. The model used is the Weather Research and Forecasting (WRF model with its coupled single-layer urban canopy model. Some model verification is presented using measurements from the Border Air Quality and Meteorology Study (BAQS-Met 2007 field campaign and additional sources. Case studies span from "neighborhood" (10 s ~308 m to very coarse (120 s ~3.7 km resolution. Small changes in scale can affect the classification of the surface, affecting both the local and grid-average meteorology. Results indicate high sensitivity in turbulent latent heat flux from the natural surface and sensible heat flux from the urban canopy. Small scale change is also shown to delay timing of a lake-breeze front passage and can affect the timing of local transition in static stability.
Improving the spatial representation of basin hydrology and flow processes in the SWAT model
Rathjens, Hendrik
2014-01-01
This dissertation aims at improving the spatial representation of basin hydrology and flow processes in the SWAT model. Die vorliegende Dissertation stellt die methodischen Grundlage zur räumlich differenzierten Modellierung mit dem Modell SWAT dar.
Progressive IRP Models for Power Resources Including EPP
Directory of Open Access Journals (Sweden)
Yiping Zhu
2017-01-01
Full Text Available In the view of optimizing regional power supply and demand, the paper makes effective planning scheduling of supply and demand side resources including energy efficiency power plant (EPP, to achieve the target of benefit, cost, and environmental constraints. In order to highlight the characteristics of different supply and demand resources in economic, environmental, and carbon constraints, three planning models with progressive constraints are constructed. Results of three models by the same example show that the best solutions to different models are different. The planning model including EPP has obvious advantages considering pollutant and carbon emission constraints, which confirms the advantages of low cost and emissions of EPP. The construction of progressive IRP models for power resources considering EPP has a certain reference value for guiding the planning and layout of EPP within other power resources and achieving cost and environmental objectives.
Noise models for superoperators in the chord representation
International Nuclear Information System (INIS)
Aolita, Mario Leandro; Garcia-Mata, Ignacio; Saraceno, Marcos
2004-01-01
We study many-qubit generalizations of quantum noise channels that can be written as an incoherent sum of translations in phase space, for which the chord representation results specially useful. Physical descriptions in terms of the spectral properties of the superoperator and the action in phase space are provided. A very natural description of decoherence leading to a preferred basis is achieved with diffusion along a phase space line. The numerical advantages of using the chord representation are illustrated in the case of coarse-graining noise
McPadden, Daryl; Brewe, Eric
2017-01-01
Representation use is a critical skill for learning, problem solving, and communicating in science, especially in physics where multiple representations often scaffold the understanding of a phenomenon. University Modeling Instruction, which is an active-learning, research-based introductory physics curriculum centered on students' use of…
Pavlick, R.; Reu, B.; Bohn, K.; Dyke, J.; Kleidon, A.
2010-12-01
The terrestrial biosphere is a complex, self-organizing system which is continually both adapting to and altering its global environment. It also exhibits a vast diversity of vegetation forms and functioning. However, the terrestrial biosphere components within current state-of-the-art Earth System Models abstract this diversity in to a handful of relatively static plant functional types. These coarse and static representations of functional diversity might contribute to overly pessimistic projections regarding terrestrial ecosystem responses to scenarios of global change (e.g. Amazonian and boreal forest diebacks). In the Jena Diversity (JeDi) model, we introduce a new approach to vegetation modelling with a richer representation of functional diversity, based not on plant functional types, but on unavoidable plant ecophysiological trade-offs, which we hypothesize should be more stable in time. The JeDi model tests a large number of plant growth strategies. Each growth strategy is simulated using a set of randomly generated parameter values, which characterize its functioning in terms of carbon allocation, ecophysiology, and phenology, which are then linked to the growing conditions at the land surface. The model is constructed in such a way that these parameters inherently lead to ecophysiological trade-offs, which determine whether a growth strategy is able to survive and reproduce under the prevalent climatic conditions. Kleidon and Mooney (2000) demonstrated that this approach is capable of reproducing the geographic distribution of species richness. More recently, we have shown the JeDi model can explain other biogeographical phenomena including the present-day global pattern of biomes (Reu et al., accepted), ecosystem evenness (Kleidon et al. 2009), and possible mechanisms for biome shifts and biodiversity changes under scenarios of global warming (Reu et al., submitted). We have also evaluated the simulated biogeochemical fluxes from JeDi against a variety
Modeling heart rate variability including the effect of sleep stages
Soliński, Mateusz; Gierałtowski, Jan; Żebrowski, Jan
2016-02-01
We propose a model for heart rate variability (HRV) of a healthy individual during sleep with the assumption that the heart rate variability is predominantly a random process. Autonomic nervous system activity has different properties during different sleep stages, and this affects many physiological systems including the cardiovascular system. Different properties of HRV can be observed during each particular sleep stage. We believe that taking into account the sleep architecture is crucial for modeling the human nighttime HRV. The stochastic model of HRV introduced by Kantelhardt et al. was used as the initial starting point. We studied the statistical properties of sleep in healthy adults, analyzing 30 polysomnographic recordings, which provided realistic information about sleep architecture. Next, we generated synthetic hypnograms and included them in the modeling of nighttime RR interval series. The results of standard HRV linear analysis and of nonlinear analysis (Shannon entropy, Poincaré plots, and multiscale multifractal analysis) show that—in comparison with real data—the HRV signals obtained from our model have very similar properties, in particular including the multifractal characteristics at different time scales. The model described in this paper is discussed in the context of normal sleep. However, its construction is such that it should allow to model heart rate variability in sleep disorders. This possibility is briefly discussed.
Representation of Dormant and Active Microbial Dynamics for Ecosystem Modeling
Energy Technology Data Exchange (ETDEWEB)
Wang, Gangsheng [ORNL; Mayes, Melanie [ORNL; Gu, Lianhong [ORNL; Schadt, Christopher Warren [ORNL
2014-01-01
Dormancy is an essential strategy for microorganisms to cope with environmental stress. However, global ecosystem models typically ignore microbial dormancy, resulting in notable model uncertainties. To facilitate the consideration of dormancy in these large-scale models, we propose a new microbial physiology component that works for a wide range of substrate availabilities. This new model is based on microbial physiological states and the major parameters are the maximum specific growth and maintenance rates of active microbes and the ratio of dormant to active maintenance rates. A major improvement of our model over extant models is that it can explain the low active microbial fractions commonly observed in undisturbed soils. Our new model shows that the exponentially-increasing respiration from substrate-induced respiration experiments can only be used to determine the maximum specific growth rate and initial active microbial biomass, while the respiration data representing both exponentially-increasing and non-exponentially-increasing phases can robustly determine a range of key parameters including the initial total live biomass, initial active fraction, the maximum specific growth and maintenance rates, and the half-saturation constant. Our new model can be incorporated into existing ecosystem models to account for dormancy in microbially-driven processes and to provide improved estimates of microbial activities.
Standard representation and unified stability analysis for dynamic artificial neural network models.
Kim, Kwang-Ki K; Patrón, Ernesto Ríos; Braatz, Richard D
2018-02-01
An overview is provided of dynamic artificial neural network models (DANNs) for nonlinear dynamical system identification and control problems, and convex stability conditions are proposed that are less conservative than past results. The three most popular classes of dynamic artificial neural network models are described, with their mathematical representations and architectures followed by transformations based on their block diagrams that are convenient for stability and performance analyses. Classes of nonlinear dynamical systems that are universally approximated by such models are characterized, which include rigorous upper bounds on the approximation errors. A unified framework and linear matrix inequality-based stability conditions are described for different classes of dynamic artificial neural network models that take additional information into account such as local slope restrictions and whether the nonlinearities within the DANNs are odd. A theoretical example shows reduced conservatism obtained by the conditions. Copyright © 2017. Published by Elsevier Ltd.
Stochastic pulse models of a partially-coherent elementary field representation of pulse coherence.
Fernández-Pousa, Carlos R
2013-04-22
A representation of the mutual coherence function (MCF) of a light pulse as an incoherent sum of partially-coherent elementary pulses is introduced. It is shown that this MCF can be decomposed into fully and partially-coherent constituents and three different pulse models of partially-coherent constituents are constructed: single elementary-pulse fluctuations, emission of elementary fields driven by white noise, and elementary pulses triggered by Poisson impulses. The fourth-order correlation function of this last model includes as limit cases those of the fluctuating-pulse and noise-driven-emission models. These results provide a means of extending elementary-field models to higher-order coherence theory.
Improving Conceptual Understanding and Representation Skills Through Excel-Based Modeling
Malone, Kathy L.; Schunn, Christian D.; Schuchardt, Anita M.
2018-02-01
The National Research Council framework for science education and the Next Generation Science Standards have developed a need for additional research and development of curricula that is both technologically model-based and includes engineering practices. This is especially the case for biology education. This paper describes a quasi-experimental design study to test the effectiveness of a model-based curriculum focused on the concepts of natural selection and population ecology that makes use of Excel modeling tools (Modeling Instruction in Biology with Excel, MBI-E). The curriculum revolves around the bio-engineering practice of controlling an invasive species. The study takes place in the Midwest within ten high schools teaching a regular-level introductory biology class. A post-test was designed that targeted a number of common misconceptions in both concept areas as well as representational usage. The results of a post-test demonstrate that the MBI-E students significantly outperformed the traditional classes in both natural selection and population ecology concepts, thus overcoming a number of misconceptions. In addition, implementing students made use of more multiple representations as well as demonstrating greater fascination for science.
A hydrodynamic model for granular material flows including segregation effects
Directory of Open Access Journals (Sweden)
Gilberg Dominik
2017-01-01
Full Text Available The simulation of granular flows including segregation effects in large industrial processes using particle methods is accurate, but very time-consuming. To overcome the long computation times a macroscopic model is a natural choice. Therefore, we couple a mixture theory based segregation model to a hydrodynamic model of Navier-Stokes-type, describing the flow behavior of the granular material. The granular flow model is a hybrid model derived from kinetic theory and a soil mechanical approach to cover the regime of fast dilute flow, as well as slow dense flow, where the density of the granular material is close to the maximum packing density. Originally, the segregation model has been formulated by Thornton and Gray for idealized avalanches. It is modified and adapted to be in the preferred form for the coupling. In the final coupled model the segregation process depends on the local state of the granular system. On the other hand, the granular system changes as differently mixed regions of the granular material differ i.e. in the packing density. For the modeling process the focus lies on dry granular material flows of two particle types differing only in size but can be easily extended to arbitrary granular mixtures of different particle size and density. To solve the coupled system a finite volume approach is used. To test the model the rotational mixing of small and large particles in a tumbler is simulated.
A hydrodynamic model for granular material flows including segregation effects
Gilberg, Dominik; Klar, Axel; Steiner, Konrad
2017-06-01
The simulation of granular flows including segregation effects in large industrial processes using particle methods is accurate, but very time-consuming. To overcome the long computation times a macroscopic model is a natural choice. Therefore, we couple a mixture theory based segregation model to a hydrodynamic model of Navier-Stokes-type, describing the flow behavior of the granular material. The granular flow model is a hybrid model derived from kinetic theory and a soil mechanical approach to cover the regime of fast dilute flow, as well as slow dense flow, where the density of the granular material is close to the maximum packing density. Originally, the segregation model has been formulated by Thornton and Gray for idealized avalanches. It is modified and adapted to be in the preferred form for the coupling. In the final coupled model the segregation process depends on the local state of the granular system. On the other hand, the granular system changes as differently mixed regions of the granular material differ i.e. in the packing density. For the modeling process the focus lies on dry granular material flows of two particle types differing only in size but can be easily extended to arbitrary granular mixtures of different particle size and density. To solve the coupled system a finite volume approach is used. To test the model the rotational mixing of small and large particles in a tumbler is simulated.
Simple suggestions for including vertical physics in oil spill models
International Nuclear Information System (INIS)
D'Asaro, Eric; University of Washington, Seatle, WA
2001-01-01
Current models of oil spills include no vertical physics. They neglect the effect of vertical water motions on the transport and concentration of floating oil. Some simple ways to introduce vertical physics are suggested here. The major suggestion is to routinely measure the density stratification of the upper ocean during oil spills in order to develop a database on the effect of stratification. (Author)
Kucharik, C.
2004-12-01
quantify the impact of nitrogen fertilizer management and climate variability since 1950 on nitrate export in the Mississippi Basin, the consequence of historical land-cover changes in the U.S. on the hydrologic cycle, and most recently, the potential consequence of springtime warming since the 1950s on farm management and crop yields across the Corn Belt. The power of this modeling approach is that representations of the key ecological processes interact with the important drivers of environmental change including climate, atmospheric carbon dioxide, and maybe most importantly, humans.
Optimal plant nitrogen use improves model representation of vegetation response to elevated CO2
Caldararu, Silvia; Kern, Melanie; Engel, Jan; Zaehle, Sönke
2017-04-01
Existing global vegetation models often cannot accurately represent observed ecosystem behaviour under transient conditions such as elevated atmospheric CO2, a problem that can be attributed to an inflexibility in model representation of plant responses. Plant optimality concepts have been proposed as a solution to this problem as they offer a way to represent plastic plant responses in complex models. Here we present a novel, next generation vegetation model which includes optimal nitrogen allocation to and within the canopy as well as optimal biomass allocation between above- and belowground components in response to nutrient and water availability. The underlying hypothesis is that plants adjust their use of nitrogen in response to environmental conditions and nutrient availability in order to maximise biomass growth. We show that for two FACE (Free Air CO2 enrichment) experiments, the Duke forest and Oak Ridge forest sites, the model can better predict vegetation responses over the duration of the experiment when optimal processes are included. Specifically, under elevated CO2 conditions, the model predicts a lower optimal leaf N concentration as well as increased biomass allocation to fine roots, which, combined with a redistribution of leaf N between the Rubisco and chlorophyll components, leads to a continued NPP response under high CO2, where models with a fixed canopy stoichiometry predict a quick onset of N limitation.Existing global vegetation models often cannot accurately represent observed ecosystem behaviour under transient conditions such as elevated atmospheric CO2, a problem that can be attributed to an inflexibility in model representation of plant responses. Plant optimality concepts have been proposed as a solution to this problem as they offer a way to represent plastic plant responses in complex models. Here we present a novel, next generation vegetation model which includes optimal nitrogen allocation to and within the canopy as well as
Energy Technology Data Exchange (ETDEWEB)
Bryan, Frank [Univ. of Washington, Seattle, WA (United States); Dennis, John [Univ. of Washington, Seattle, WA (United States); MacCready, Parker [Univ. of Washington, Seattle, WA (United States); Whitney, Michael [Univ. of Washington, Seattle, WA (United States)
2016-10-20
This project aimed to improve long term global climate simulations by resolving and enhancing the representation of the processes involved in the cycling of freshwater through estuaries and coastal regions. This was a collaborative multi-institution project consisting of physical oceanographers, climate model developers, and computational scientists. It specifically targeted the DOE objectives of advancing simulation and predictive capability of climate models through improvements in resolution and physical process representation.
Energy Technology Data Exchange (ETDEWEB)
Bryan, Frank [Univ. of Connecticut, Storrs, CT (United States); Dennis, John [Univ. of Connecticut, Storrs, CT (United States); MacCready, Parker [Univ. of Connecticut, Storrs, CT (United States); Whitney, Michael M. [Univ. of Connecticut, Storrs, CT (United States)
2016-09-30
This project aimed to improve long term global climate simulations by resolving and enhancing the representation of the processes involved in the cycling of freshwater through estuaries and coastal regions. This was a collaborative multi-institution project consisting of physical oceanographers, climate model developers, and computational scientists. It specifically targeted the DOE objectives of advancing simulation and predictive capability of climate models through improvements in resolution and physical process representation.
Cheng, Hong
2015-01-01
This unique text/reference presents a comprehensive review of the state of the art in sparse representations, modeling and learning. The book examines both the theoretical foundations and details of algorithm implementation, highlighting the practical application of compressed sensing research in visual recognition and computer vision. Topics and features: provides a thorough introduction to the fundamentals of sparse representation, modeling and learning, and the application of these techniques in visual recognition; describes sparse recovery approaches, robust and efficient sparse represen
Villeneuve, Jérôme; Cadoz, Claude; Castagné, Nicolas
2015-01-01
The motivation of this paper is to highlight the importance of visual representations for artists when modeling and simulating mass-interaction physical networks in the context of sound synthesis and musical composition. GENESIS is a musician-oriented software environment for sound synthesis and musical composition. However, despite this orientation, a substantial amount of effort has been put into building a rich variety of tools based on static or dynamic visual representations of models an...
Modeling urban landscape: New paradigms and challenges in territorial representation
Directory of Open Access Journals (Sweden)
Sheyla Aguilar de Santana
2013-05-01
Full Text Available This paper aims to give a brief background on the production of urban space considering the social functions of the city, the needs of contemporary urban reforms and the need for tools that assist in decision making. This state of the art about the production space justifies the current studies on the development of geoprocessing tools, techniques and methodologies that attempt the needs of creating interpretive portraits of urban landscapes to facilitate dialogue between urban technical, administrators and community. In this sense, it is presented how GIS has been working within the context of urban planning and appointed the new challenges and paradigms of territorial representation.
Haili, Hasnawati; Maknun, Johar; Siahaan, Parsaoran
2017-08-01
Physics is a lessons that related to students' daily experience. Therefore, before the students studying in class formally, actually they have already have a visualization and prior knowledge about natural phenomenon and could wide it themselves. The learning process in class should be aimed to detect, process, construct, and use students' mental model. So, students' mental model agree with and builds in the right concept. The previous study held in MAN 1 Muna informs that in learning process the teacher did not pay attention students' mental model. As a consequence, the learning process has not tried to build students' mental modelling ability (MMA). The purpose of this study is to describe the improvement of students' MMA as a effect of problem solving based learning model with multiple representations approach. This study is pre experimental design with one group pre post. It is conducted in XI IPA MAN 1 Muna 2016/2017. Data collection uses problem solving test concept the kinetic theory of gasses and interview to get students' MMA. The result of this study is clarification students' MMA which is categorized in 3 category; High Mental Modelling Ability (H-MMA) for 7MMA) for 3MMA) for 0 ≤ x ≤ 3 score. The result shows that problem solving based learning model with multiple representations approach can be an alternative to be applied in improving students' MMA.
A knowledge representation meta-model for rule-based modelling of signalling networks
Directory of Open Access Journals (Sweden)
Adrien Basso-Blandin
2016-03-01
Full Text Available The study of cellular signalling pathways and their deregulation in disease states, such as cancer, is a large and extremely complex task. Indeed, these systems involve many parts and processes but are studied piecewise and their literatures and data are consequently fragmented, distributed and sometimes—at least apparently—inconsistent. This makes it extremely difficult to build significant explanatory models with the result that effects in these systems that are brought about by many interacting factors are poorly understood. The rule-based approach to modelling has shown some promise for the representation of the highly combinatorial systems typically found in signalling where many of the proteins are composed of multiple binding domains, capable of simultaneous interactions, and/or peptide motifs controlled by post-translational modifications. However, the rule-based approach requires highly detailed information about the precise conditions for each and every interaction which is rarely available from any one single source. Rather, these conditions must be painstakingly inferred and curated, by hand, from information contained in many papers—each of which contains only part of the story. In this paper, we introduce a graph-based meta-model, attuned to the representation of cellular signalling networks, which aims to ease this massive cognitive burden on the rule-based curation process. This meta-model is a generalization of that used by Kappa and BNGL which allows for the flexible representation of knowledge at various levels of granularity. In particular, it allows us to deal with information which has either too little, or too much, detail with respect to the strict rule-based meta-model. Our approach provides a basis for the gradual aggregation of fragmented biological knowledge extracted from the literature into an instance of the meta-model from which we can define an automated translation into executable Kappa programs.
Exclusive queueing model including the choice of service windows
Tanaka, Masahiro; Yanagisawa, Daichi; Nishinari, Katsuhiro
2018-01-01
In a queueing system involving multiple service windows, choice behavior is a significant concern. This paper incorporates the choice of service windows into a queueing model with a floor represented by discrete cells. We contrived a logit-based choice algorithm for agents considering the numbers of agents and the distances to all service windows. Simulations were conducted with various parameters of agent choice preference for these two elements and for different floor configurations, including the floor length and the number of service windows. We investigated the model from the viewpoint of transit times and entrance block rates. The influences of the parameters on these factors were surveyed in detail and we determined that there are optimum floor lengths that minimize the transit times. In addition, we observed that the transit times were determined almost entirely by the entrance block rates. The results of the presented model are relevant to understanding queueing systems including the choice of service windows and can be employed to optimize facility design and floor management.
The temporal representation of speech in a nonlinear model of the guinea pig cochlea
Holmes, Stephen D.; Sumner, Christian J.; O'Mard, Lowel P.; Meddis, Ray
2004-12-01
The temporal representation of speechlike stimuli in the auditory-nerve output of a guinea pig cochlea model is described. The model consists of a bank of dual resonance nonlinear filters that simulate the vibratory response of the basilar membrane followed by a model of the inner hair cell/auditory nerve complex. The model is evaluated by comparing its output with published physiological auditory nerve data in response to single and double vowels. The evaluation includes analyses of individual fibers, as well as ensemble responses over a wide range of best frequencies. In all cases the model response closely follows the patterns in the physiological data, particularly the tendency for the temporal firing pattern of each fiber to represent the frequency of a nearby formant of the speech sound. In the model this behavior is largely a consequence of filter shapes; nonlinear filtering has only a small contribution at low frequencies. The guinea pig cochlear model produces a useful simulation of the measured physiological response to simple speech sounds and is therefore suitable for use in more advanced applications including attempts to generalize these principles to the response of human auditory system, both normal and impaired. .
Kramers-Wannier duality and worldline representation for the SU(2) principal chiral model
Gattringer, Christof; Göschl, Daniel; Marchis, Carlotta
2018-03-01
In this letter we explore different representations of the SU(2) principal chiral model on the lattice. We couple chemical potentials to two of the conserved charges to induce finite density. This leads to a complex action such that the conventional field representation cannot be used for a Monte Carlo simulation. Using the recently developed Abelian color flux approach we derive a new worldline representation where the partition sum has only real and positive weights, such that a Monte Carlo simulation is possible. In a second step we transform the model to new dual variables in the Kramers-Wannier (KW) sense, such that the constraints are automatically fulfilled, and we obtain a second representation free of the complex action problem. We implement exploratory Monte Carlo simulations for both, the worldline, as well as the KW-dual form, for cross-checking the two dualizations and a first assessment of their potential for dual simulations.
Shape prior modeling using sparse representation and online dictionary learning.
Zhang, Shaoting; Zhan, Yiqiang; Zhou, Yan; Uzunbas, Mustafa; Metaxas, Dimitris N
2012-01-01
The recently proposed sparse shape composition (SSC) opens a new avenue for shape prior modeling. Instead of assuming any parametric model of shape statistics, SSC incorporates shape priors on-the-fly by approximating a shape instance (usually derived from appearance cues) by a sparse combination of shapes in a training repository. Theoretically, one can increase the modeling capability of SSC by including as many training shapes in the repository. However, this strategy confronts two limitations in practice. First, since SSC involves an iterative sparse optimization at run-time, the more shape instances contained in the repository, the less run-time efficiency SSC has. Therefore, a compact and informative shape dictionary is preferred to a large shape repository. Second, in medical imaging applications, training shapes seldom come in one batch. It is very time consuming and sometimes infeasible to reconstruct the shape dictionary every time new training shapes appear. In this paper, we propose an online learning method to address these two limitations. Our method starts from constructing an initial shape dictionary using the K-SVD algorithm. When new training shapes come, instead of re-constructing the dictionary from the ground up, we update the existing one using a block-coordinates descent approach. Using the dynamically updated dictionary, sparse shape composition can be gracefully scaled up to model shape priors from a large number of training shapes without sacrificing run-time efficiency. Our method is validated on lung localization in X-Ray and cardiac segmentation in MRI time series. Compared to the original SSC, it shows comparable performance while being significantly more efficient.
Maddison, J. R.; Marshall, D. P.; Pain, C. C.; Piggott, M. D.
Accurate representation of geostrophic and hydrostatic balance is an essential requirement for numerical modelling of geophysical flows. Potentially, unstructured mesh numerical methods offer significant benefits over conventional structured meshes, including the ability to conform to arbitrary bounding topography in a natural manner and the ability to apply dynamic mesh adaptivity. However, there is a need to develop robust schemes with accurate representation of physical balance on arbitrary unstructured meshes. We discuss the origin of physical balance errors in a finite element discretisation of the Navier-Stokes equations using the fractional timestep pressure projection method. By considering the Helmholtz decomposition of forcing terms in the momentum equation, it is shown that the components of the buoyancy and Coriolis accelerations that project onto the non-divergent velocity tendency are the small residuals between two terms of comparable magnitude. Hence there is a potential for significant injection of imbalance by a numerical method that does not compute these residuals accurately. This observation is used to motivate a balanced pressure decomposition method whereby an additional "balanced pressure" field, associated with buoyancy and Coriolis accelerations, is solved for at increased accuracy and used to precondition the solution for the dynamical pressure. The utility of this approach is quantified in a fully non-linear system in exact geostrophic balance. The approach is further tested via quantitative comparison of unstructured mesh simulations of the thermally driven rotating annulus against laboratory data. Using a piecewise linear discretisation for velocity and pressure (a stabilised P1P1 discretisation), it is demonstrated that the balanced pressure decomposition method is required for a physically realistic representation of the system.
Energy Technology Data Exchange (ETDEWEB)
Belgiorno, Francesco [Politecnico di Milano, Dipartimento di Matematica, Milano (Italy); INdAM-GNFM, Milano (Italy); Cacciatori, Sergio L. [Universita dell' Insubria, Department of Science and High Technology, Como (Italy); INFN sezione di Milano, Milano (Italy); Dalla Piazza, Francesco [Universita ' ' La Sapienza' ' , Dipartimento di Matematica, Roma (Italy); Doronzo, Michele [Universita dell' Insubria, Department of Science and High Technology, Como (Italy)
2016-06-15
We investigate the quantisation in the Heisenberg representation of a model which represents a simplification of the Hopfield model for dielectric media, where the electromagnetic field is replaced by a scalar field φ and the role of the polarisation field is played by a further scalar field ψ. The model, which is quadratic in the fields, is still characterised by a non-trivial physical content, as the physical particles correspond to the polaritons of the standard Hopfield model of condensed matter physics. Causality is also taken into account and a discussion of the standard interaction representation is also considered. (orig.)
International Nuclear Information System (INIS)
Belgiorno, Francesco; Cacciatori, Sergio L.; Dalla Piazza, Francesco; Doronzo, Michele
2016-01-01
We investigate the quantisation in the Heisenberg representation of a model which represents a simplification of the Hopfield model for dielectric media, where the electromagnetic field is replaced by a scalar field φ and the role of the polarisation field is played by a further scalar field ψ. The model, which is quadratic in the fields, is still characterised by a non-trivial physical content, as the physical particles correspond to the polaritons of the standard Hopfield model of condensed matter physics. Causality is also taken into account and a discussion of the standard interaction representation is also considered. (orig.)
Modelling Mediterranean agro-ecosystems by including agricultural trees in the LPJmL model
Fader, M.; von Bloh, W.; Shi, S.; Bondeau, A.; Cramer, W.
2015-11-01
In the Mediterranean region, climate and land use change are expected to impact on natural and agricultural ecosystems by warming, reduced rainfall, direct degradation of ecosystems and biodiversity loss. Human population growth and socioeconomic changes, notably on the eastern and southern shores, will require increases in food production and put additional pressure on agro-ecosystems and water resources. Coping with these challenges requires informed decisions that, in turn, require assessments by means of a comprehensive agro-ecosystem and hydrological model. This study presents the inclusion of 10 Mediterranean agricultural plants, mainly perennial crops, in an agro-ecosystem model (Lund-Potsdam-Jena managed Land - LPJmL): nut trees, date palms, citrus trees, orchards, olive trees, grapes, cotton, potatoes, vegetables and fodder grasses. The model was successfully tested in three model outputs: agricultural yields, irrigation requirements and soil carbon density. With the development presented in this study, LPJmL is now able to simulate in good detail and mechanistically the functioning of Mediterranean agriculture with a comprehensive representation of ecophysiological processes for all vegetation types (natural and agricultural) and in a consistent framework that produces estimates of carbon, agricultural and hydrological variables for the entire Mediterranean basin. This development paves the way for further model extensions aiming at the representation of alternative agro-ecosystems (e.g. agroforestry), and opens the door for a large number of applications in the Mediterranean region, for example assessments of the consequences of land use transitions, the influence of management practices and climate change impacts.
Gaussian Process Regression (GPR) Representation in Predictive Model Markup Language (PMML).
Park, J; Lechevalier, D; Ak, R; Ferguson, M; Law, K H; Lee, Y-T T; Rachuri, S
2017-01-01
This paper describes Gaussian process regression (GPR) models presented in predictive model markup language (PMML). PMML is an extensible-markup-language (XML) -based standard language used to represent data-mining and predictive analytic models, as well as pre- and post-processed data. The previous PMML version, PMML 4.2, did not provide capabilities for representing probabilistic (stochastic) machine-learning algorithms that are widely used for constructing predictive models taking the associated uncertainties into consideration. The newly released PMML version 4.3, which includes the GPR model, provides new features: confidence bounds and distribution for the predictive estimations. Both features are needed to establish the foundation for uncertainty quantification analysis. Among various probabilistic machine-learning algorithms, GPR has been widely used for approximating a target function because of its capability of representing complex input and output relationships without predefining a set of basis functions, and predicting a target output with uncertainty quantification. GPR is being employed to various manufacturing data-analytics applications, which necessitates representing this model in a standardized form for easy and rapid employment. In this paper, we present a GPR model and its representation in PMML. Furthermore, we demonstrate a prototype using a real data set in the manufacturing domain.
Spectrum recovery method based on sparse representation for segmented multi-Gaussian model
Teng, Yidan; Zhang, Ye; Ti, Chunli; Su, Nan
2016-09-01
Hyperspectral images can realize crackajack features discriminability for supplying diagnostic characteristics with high spectral resolution. However, various degradations may generate negative influence on the spectral information, including water absorption, bands-continuous noise. On the other hand, the huge data volume and strong redundancy among spectrums produced intense demand on compressing HSIs in spectral dimension, which also leads to the loss of spectral information. The reconstruction of spectral diagnostic characteristics has irreplaceable significance for the subsequent application of HSIs. This paper introduces a spectrum restoration method for HSIs making use of segmented multi-Gaussian model (SMGM) and sparse representation. A SMGM is established to indicating the unsymmetrical spectral absorption and reflection characteristics, meanwhile, its rationality and sparse property are discussed. With the application of compressed sensing (CS) theory, we implement sparse representation to the SMGM. Then, the degraded and compressed HSIs can be reconstructed utilizing the uninjured or key bands. Finally, we take low rank matrix recovery (LRMR) algorithm for post processing to restore the spatial details. The proposed method was tested on the spectral data captured on the ground with artificial water absorption condition and an AVIRIS-HSI data set. The experimental results in terms of qualitative and quantitative assessments demonstrate that the effectiveness on recovering the spectral information from both degradations and loss compression. The spectral diagnostic characteristics and the spatial geometry feature are well preserved.
Scoring predictive models using a reduced representation of proteins: model and energy definition
Directory of Open Access Journals (Sweden)
Corazza Alessandra
2007-03-01
Full Text Available Abstract Background Reduced representations of proteins have been playing a keyrole in the study of protein folding. Many such models are available, with different representation detail. Although the usefulness of many such models for structural bioinformatics applications has been demonstrated in recent years, there are few intermediate resolution models endowed with an energy model capable, for instance, of detecting native or native-like structures among decoy sets. The aim of the present work is to provide a discrete empirical potential for a reduced protein model termed here PC2CA, because it employs a PseudoCovalent structure with only 2 Centers of interactions per Amino acid, suitable for protein model quality assessment. Results All protein structures in the set top500H have been converted in reduced form. The distribution of pseudobonds, pseudoangle, pseudodihedrals and distances between centers of interactions have been converted into potentials of mean force. A suitable reference distribution has been defined for non-bonded interactions which takes into account excluded volume effects and protein finite size. The correlation between adjacent main chain pseudodihedrals has been converted in an additional energetic term which is able to account for cooperative effects in secondary structure elements. Local energy surface exploration is performed in order to increase the robustness of the energy function. Conclusion The model and the energy definition proposed have been tested on all the multiple decoys' sets in the Decoys'R'us database. The energetic model is able to recognize, for almost all sets, native-like structures (RMSD less than 2.0 Å. These results and those obtained in the blind CASP7 quality assessment experiment suggest that the model compares well with scoring potentials with finer granularity and could be useful for fast exploration of conformational space. Parameters are available at the url: http://www.dstb.uniud.it/~ffogolari/download/.
Scoring predictive models using a reduced representation of proteins: model and energy definition.
Fogolari, Federico; Pieri, Lidia; Dovier, Agostino; Bortolussi, Luca; Giugliarelli, Gilberto; Corazza, Alessandra; Esposito, Gennaro; Viglino, Paolo
2007-03-23
Reduced representations of proteins have been playing a keyrole in the study of protein folding. Many such models are available, with different representation detail. Although the usefulness of many such models for structural bioinformatics applications has been demonstrated in recent years, there are few intermediate resolution models endowed with an energy model capable, for instance, of detecting native or native-like structures among decoy sets. The aim of the present work is to provide a discrete empirical potential for a reduced protein model termed here PC2CA, because it employs a PseudoCovalent structure with only 2 Centers of interactions per Amino acid, suitable for protein model quality assessment. All protein structures in the set top500H have been converted in reduced form. The distribution of pseudobonds, pseudoangle, pseudodihedrals and distances between centers of interactions have been converted into potentials of mean force. A suitable reference distribution has been defined for non-bonded interactions which takes into account excluded volume effects and protein finite size. The correlation between adjacent main chain pseudodihedrals has been converted in an additional energetic term which is able to account for cooperative effects in secondary structure elements. Local energy surface exploration is performed in order to increase the robustness of the energy function. The model and the energy definition proposed have been tested on all the multiple decoys' sets in the Decoys'R'us database. The energetic model is able to recognize, for almost all sets, native-like structures (RMSD less than 2.0 A). These results and those obtained in the blind CASP7 quality assessment experiment suggest that the model compares well with scoring potentials with finer granularity and could be useful for fast exploration of conformational space. Parameters are available at the url: http://www.dstb.uniud.it/~ffogolari/download/.
Bahls, Christian Rüdiger; Truong, Duy; Rienen, Ursula van
2018-01-01
The bio-chemo-mechanical model has many applications in modelling cell contractility. In simulations this model usually is coupled to the continuum mechanics of the cell by defining a large number of directions for stress fibres at each point. In this paper, another representation for coupling the biochemical processes in the bio-chemo-mechanical model is introduced. Using a quadratic form to represent the angular dependency of the activation level, the model's number of degrees of freedom is significantly reduced. Numerical results similar to the original representation are obtained while a significant improvement in computation time is achieved. Copyright © 2017 Elsevier Ltd. All rights reserved.
Energy Technology Data Exchange (ETDEWEB)
Niyogi, Devdutta S. [Purdue
2013-06-07
The CLASIC experiment was conducted over the US southern great plains (SGP) in June 2007 with an objective to lead an enhanced understanding of the cumulus convection particularly as it relates to land surface conditions. This project was design to help assist with understanding the overall improvement of land atmosphere convection initiation representation of which is important for global and regional models. The study helped address one of the critical documented deficiency in the models central to the ARM objectives for cumulus convection initiation and particularly under summer time conditions. This project was guided by the scientific question building on the CLASIC theme questions: What is the effect of improved land surface representation on the ability of coupled models to simulate cumulus and convection initiation? The focus was on the US Southern Great Plains region. Since the CLASIC period was anomalously wet the strategy has been to use other periods and domains to develop the comparative assessment for the CLASIC data period, and to understand the mechanisms of the anomalous wet conditions on the tropical systems and convection over land. The data periods include the IHOP 2002 field experiment that was over roughly same domain as the CLASIC in the SGP, and some of the DOE funded Ameriflux datasets.
A Gloss Composition and Context Clustering Based Distributed Word Sense Representation Model
Directory of Open Access Journals (Sweden)
Tao Chen
2015-08-01
Full Text Available In recent years, there has been an increasing interest in learning a distributed representation of word sense. Traditional context clustering based models usually require careful tuning of model parameters, and typically perform worse on infrequent word senses. This paper presents a novel approach which addresses these limitations by first initializing the word sense embeddings through learning sentence-level embeddings from WordNet glosses using a convolutional neural networks. The initialized word sense embeddings are used by a context clustering based model to generate the distributed representations of word senses. Our learned representations outperform the publicly available embeddings on half of the metrics in the word similarity task, 6 out of 13 sub tasks in the analogical reasoning task, and gives the best overall accuracy in the word sense effect classification task, which shows the effectiveness of our proposed distributed distribution learning model.
Interactive Shape Modeling using a Skeleton-Mesh Co-Representation
DEFF Research Database (Denmark)
Bærentzen, Jacob Andreas; Abdrashitov, Rinat; Singh, Karan
2014-01-01
We introduce the Polar-Annular Mesh representation (PAM). A PAM is a mesh-skeleton co-representation designed for the modeling of 3D organic, articulated shapes. A PAM represents a manifold mesh as a partition of polar (triangle fans) and annular (rings of quads) regions. The skeletal topology...... of a shape is uniquely embedded in the mesh connectivity of a PAM, enabling both surface and skeletal modeling operations, interchangeably and directly on the mesh itself. We develop an algorithm to convert arbitrary triangle meshes into PAMs as well as techniques to simplify PAMs and a method to convert...... a PAM to a quad-only mesh. We further present a PAM-based multi-touch sculpting application in order to demonstrate its utility as a shape representation for the interactive modeling of organic, articulated figures as well as for editing and posing of pre-existing models....
Tzeng, Yuhtsuen; van den Broek, Paul; Kendeou, Panayiota; Lee, Chengyuan
2005-05-01
The complexity of text comprehension demands a computational approach to describe the cognitive processes involved. In this article, we present the computational implementation of the landscape model of reading. This model captures both on-line comprehension processes during reading and the off-line memory representation after reading is completed, incorporating both memory-based and coherence-based mechanisms of comprehension. The overall architecture and specific parameters of the program are described, and a running example is provided. Several studies comparing computational and behavioral data indicate that the implemented model is able to account for cycle-by-cycle comprehension processes and memory for a variety of text types and reading situations.
DEFF Research Database (Denmark)
Wulf-Andersen, Trine Østergaard
2012-01-01
, and dialogue, of situated participants. The article includes a lengthy example of a poetic representation of one participant’s story, and the author comments on the potentials of ‘doing’ poetic representations as an example of writing in ways that challenges what sometimes goes unasked in participative social...
Effects of different representations of transport in the new EMAC-SWIFT chemistry climate model
Scheffler, Janice; Langematz, Ulrike; Wohltmann, Ingo; Kreyling, Daniel; Rex, Markus
2017-04-01
It is well known that the representation of atmospheric ozone chemistry in weather and climate models is essential for a realistic simulation of the atmospheric state. Interactively coupled chemistry climate models (CCMs) provide a means to realistically simulate the interaction between atmospheric chemistry and dynamics. The calculation of chemistry in CCMs, however, is computationally expensive which renders the use of complex chemistry models not suitable for ensemble simulations or simulations with multiple climate change scenarios. In these simulations ozone is therefore usually prescribed as a climatological field or included by incorporating a fast linear ozone scheme into the model. While prescribed climatological ozone fields are often not aligned with the modelled dynamics, a linear ozone scheme may not be applicable for a wide range of climatological conditions. An alternative approach to represent atmospheric chemistry in climate models which can cope with non-linearities in ozone chemistry and is applicable to a wide range of climatic states is the Semi-empirical Weighted Iterative Fit Technique (SWIFT) that is driven by reanalysis data and has been validated against observational satellite data and runs of a full Chemistry and Transport Model. SWIFT has been implemented into the ECHAM/MESSy (EMAC) chemistry climate model that uses a modular approach to climate modelling where individual model components can be switched on and off. When using SWIFT in EMAC, there are several possibilities to represent the effect of transport inside the polar vortex: the semi-Lagrangian transport scheme of EMAC and a transport parameterisation that can be useful when using SWIFT in models not having transport of their own. Here, we present results of equivalent simulations with different handling of transport, compare with EMAC simulations with full interactive chemistry and evaluate the results with observations.
Potts Model with Invisible Colors : Random-Cluster Representation and Pirogov–Sinai Analysis
Enter, Aernout C.D. van; Iacobelli, Giulio; Taati, Siamak
We study a recently introduced variant of the ferromagnetic Potts model consisting of a ferromagnetic interaction among q “visible” colors along with the presence of r non-interacting “invisible” colors. We introduce a random-cluster representation for the model, for which we prove the existence of
Sunyono; Yuanita, L.; Ibrahim, M.
2015-01-01
The aim of this research is identify the effectiveness of a multiple representation-based learning model, which builds a mental model within the concept of atomic structure. The research sample of 108 students in 3 classes is obtained randomly from among students of Mathematics and Science Education Studies using a stratified random sampling…
International Nuclear Information System (INIS)
Weller, W.
1990-01-01
Functional integral representations are constructed for Fermions with spin 1/2, in which the fields satisfy directly by construction the constraints (e. g., exclusion of double occupancy of a site) appearing in recent models in the theory of high-temperature superconductivity. Thus, the enforcement of the constraints by delta functions in the integration measure is avoided. Perelomov's concept of generalized coherent states is used. However, in constructing such representations, exponential functions of linear combinations of operators (which are difficult to disentangle) are avoided, as is the construction and reduction of the invariant measure. Instead, an ansatz is used for the resolution of the unity operator. This approach also provides more freedom in choosing the appropriate fields. Several new and simple representations with only few elementary fields are given. The representation already used by Wiegmann is recovered. In this case and in any other cases the integration measure is explicitly given. In all these representations, the original Fermi operators are substituted by the product of a spin independent Grassmann field and a spin dependent bosonic (complex) field in accordance with the physical idea of separation of charge and spin degrees of freedom. It is further shown how a change in the integration measure eliminates also zero occupancy (the case of the Heisenberg antiferromagnet). The absence of an explicit delta function constraint in the functional integral is reflected in a special form of the kinetic part of the action. The considered representations are compared with that of the slave boson method. (orig.)
Challenges in land model representation of heat transfer in snow and frozen soils
Musselman, K. N.; Clark, M. P.; Nijssen, B.; Arnold, J.
2017-12-01
Accurate model simulations of soil thermal and moisture states are critical for realistic estimates of exchanges of energy, water, and biogeochemical fluxes at the land-atmosphere interface. In cold regions, seasonal snow-cover and organic soils form insulating barriers, modifying the heat and moisture exchange that would otherwise occur between mineral soils and the atmosphere. The thermal properties of these media are highly dynamic functions of mass, water and ice content. Land surface models vary in their representation of snow and soil processes, and thus in the treatment of insulation and heat exchange. For some models, recent development efforts have improved representation of heat transfer in cold regions, such as with multi-layer snow treatment, inclusion of soil freezing and organic soil properties, yet model deficiencies remain prevalent. We evaluate models that participated in the Protocol for the Analysis of Land Surface Models (PALS) Land Surface Model Benchmarking Evaluation Project (PLUMBER) experiment for proficiency in simulating heat transfer between the soil through the snowpack to the atmosphere. Using soil observations from cold region sites and a controlled experiment with Structure for Unifying Multiple Modeling Alternatives (SUMMA), we explore the impact of snow and soil model decisions and parameter values on heat transfer model skill. Specifically, we use SUMMA to mimic the spread of behaviors exhibited by the models that participated in PLUMBER. The experiment allows us to isolate relationships between model skill and process representation. The results are aimed to better understand existing model challenges and identify potential advances for cold region models.
Including spatial data in nutrient balance modelling on dairy farms
van Leeuwen, Maricke; van Middelaar, Corina; Stoof, Cathelijne; Oenema, Jouke; Stoorvogel, Jetse; de Boer, Imke
2017-04-01
The Annual Nutrient Cycle Assessment (ANCA) calculates the nitrogen (N) and phosphorus (P) balance at a dairy farm, while taking into account the subsequent nutrient cycles of the herd, manure, soil and crop components. Since January 2016, Dutch dairy farmers are required to use ANCA in order to increase understanding of nutrient flows and to minimize nutrient losses to the environment. A nutrient balance calculates the difference between nutrient inputs and outputs. Nutrients enter the farm via purchased feed, fertilizers, deposition and fixation by legumes (nitrogen), and leave the farm via milk, livestock, manure, and roughages. A positive balance indicates to which extent N and/or P are lost to the environment via gaseous emissions (N), leaching, run-off and accumulation in soil. A negative balance indicates that N and/or P are depleted from soil. ANCA was designed to calculate average nutrient flows on farm level (for the herd, manure, soil and crop components). ANCA was not designed to perform calculations of nutrient flows at the field level, as it uses averaged nutrient inputs and outputs across all fields, and it does not include field specific soil characteristics. Land management decisions, however, such as the level of N and P application, are typically taken at the field level given the specific crop and soil characteristics. Therefore the information that ANCA provides is likely not sufficient to support farmers' decisions on land management to minimize nutrient losses to the environment. This is particularly a problem when land management and soils vary between fields. For an accurate estimate of nutrient flows in a given farming system that can be used to optimize land management, the spatial scale of nutrient inputs and outputs (and thus the effect of land management and soil variation) could be essential. Our aim was to determine the effect of the spatial scale of nutrient inputs and outputs on modelled nutrient flows and nutrient use efficiencies
Galvan, Jose Ramon; Saxena, Abhinav; Goebel, Kai Frank
2012-01-01
This article discusses several aspects of uncertainty representation and management for model-based prognostics methodologies based on our experience with Kalman Filters when applied to prognostics for electronics components. In particular, it explores the implications of modeling remaining useful life prediction as a stochastic process, and how it relates to uncertainty representation, management and the role of prognostics in decision-making. A distinction between the interpretations of estimated remaining useful life probability density function is explained and a cautionary argument is provided against mixing interpretations for two while considering prognostics in making critical decisions.
Fatichi, Simone; Manzoni, Stefano; Or, Dani; Paschalis, Athanasios
2016-04-01
The potential of a given ecosystem to store and release carbon is inherently linked to soil biogeochemical processes. These processes are deeply connected to the water, energy, and vegetation dynamics above and belowground. Recently, it has been advocated that a mechanistic representation of soil biogeochemistry require: (i) partitioning of soil organic carbon (SOC) pools according to their functional role; (ii) an explicit representation of microbial dynamics; (iii) coupling of carbon and nutrient cycles. While some of these components have been introduced in specialized models, they have been rarely implemented in terrestrial biosphere models and tested in real cases. In this study, we combine a new soil biogeochemistry model with an existing model of land-surface hydrology and vegetation dynamics (T&C). Specifically the soil biogeochemistry component explicitly separates different litter pools and distinguishes SOC in particulate, dissolved and mineral associated fractions. Extracellular enzymes and microbial pools are explicitly represented differentiating the functional roles of bacteria, saprotrophic and mycorrhizal fungi. Microbial activity depends on temperature, soil moisture and litter or SOC stoichiometry. The activity of macrofauna is also modeled. Nutrient dynamics include the cycles of nitrogen, phosphorous and potassium. The model accounts for feedbacks between nutrient limitations and plant growth as well as for plant stoichiometric flexibility. In turn, litter input is a function of the simulated vegetation dynamics. Root exudation and export to mycorrhiza are computed based on a nutrient uptake cost function. The combined model is tested to reproduce respiration dynamics and nitrogen cycle in few sites where data were available to test plausibility of results across a range of different metrics. For instance in a Swiss grassland ecosystem, fine root, bacteria, fungal and macrofaunal respiration account for 40%, 23%, 33% and 4% of total belowground
Influence of input matrix representation on topic modelling performance
CSIR Research Space (South Africa)
De Waal, A
2010-11-01
Full Text Available Topic models explain a collection of documents with a small set of distributions over terms. These distributions over terms define the topics. Topic models ignore the structure of documents and use a bag-of-words approach which relies solely...
Single-Phase Bundle Flows Including Macroscopic Turbulence Model
Energy Technology Data Exchange (ETDEWEB)
Lee, Seung Jun; Yoon, Han Young [KAERI, Daejeon (Korea, Republic of); Yoon, Seok Jong; Cho, Hyoung Kyu [Seoul National University, Seoul (Korea, Republic of)
2016-05-15
To deal with various thermal hydraulic phenomena due to rapid change of fluid properties when an accident happens, securing mechanistic approaches as much as possible may reduce the uncertainty arising from improper applications of the experimental models. In this study, the turbulence mixing model, which is well defined in the subchannel analysis code such as VIPRE, COBRA, and MATRA by experiments, is replaced by a macroscopic k-e turbulence model, which represents the aspect of mathematical derivation. The performance of CUPID with macroscopic turbulence model is validated against several bundle experiments: CNEN 4x4 and PNL 7x7 rod bundle tests. In this study, the macroscopic k-e model has been validated for the application to subchannel analysis. It has been implemented in the CUPID code and validated against CNEN 4x4 and PNL 7x7 rod bundle tests. The results showed that the macroscopic k-e turbulence model can estimate the experiments properly.
An AgMIP framework for improved agricultural representation in integrated assessment models
Ruane, Alex C.; Rosenzweig, Cynthia; Asseng, Senthold; Boote, Kenneth J.; Elliott, Joshua; Ewert, Frank; Jones, James W.; Martre, Pierre; McDermid, Sonali P.; Müller, Christoph; Snyder, Abigail; Thorburn, Peter J.
2017-12-01
Integrated assessment models (IAMs) hold great potential to assess how future agricultural systems will be shaped by socioeconomic development, technological innovation, and changing climate conditions. By coupling with climate and crop model emulators, IAMs have the potential to resolve important agricultural feedback loops and identify unintended consequences of socioeconomic development for agricultural systems. Here we propose a framework to develop robust representation of agricultural system responses within IAMs, linking downstream applications with model development and the coordinated evaluation of key climate responses from local to global scales. We survey the strengths and weaknesses of protocol-based assessments linked to the Agricultural Model Intercomparison and Improvement Project (AgMIP), each utilizing multiple sites and models to evaluate crop response to core climate changes including shifts in carbon dioxide concentration, temperature, and water availability, with some studies further exploring how climate responses are affected by nitrogen levels and adaptation in farm systems. Site-based studies with carefully calibrated models encompass the largest number of activities; however they are limited in their ability to capture the full range of global agricultural system diversity. Representative site networks provide more targeted response information than broadly-sampled networks, with limitations stemming from difficulties in covering the diversity of farming systems. Global gridded crop models provide comprehensive coverage, although with large challenges for calibration and quality control of inputs. Diversity in climate responses underscores that crop model emulators must distinguish between regions and farming system while recognizing model uncertainty. Finally, to bridge the gap between bottom-up and top-down approaches we recommend the deployment of a hybrid climate response system employing a representative network of sites to bias
The polygonal model: A simple representation of biomolecules as a tool for teaching metabolism.
Bonafe, Carlos Francisco Sampaio; Bispo, Jose Ailton Conceição; de Jesus, Marcelo Bispo
2018-01-01
Metabolism involves numerous reactions and organic compounds that the student must master to understand adequately the processes involved. Part of biochemical learning should include some knowledge of the structure of biomolecules, although the acquisition of such knowledge can be time-consuming and may require significant effort from the student. In this report, we describe the "polygonal model" as a new means of graphically representing biomolecules. This model is based on the use of geometric figures such as open triangles, squares, and circles to represent hydroxyl, carbonyl, and carboxyl groups, respectively. The usefulness of the polygonal model was assessed by undergraduate students in a classroom activity that consisted of "transforming" molecules from Fischer models to polygonal models and vice and versa. The survey was applied to 135 undergraduate Biology and Nursing students. Students found the model easy to use and we noted that it allowed identification of students' misconceptions in basic concepts of organic chemistry, such as in stereochemistry and organic groups that could then be corrected. The students considered the polygonal model easier and faster for representing molecules than Fischer representations, without loss of information. These findings indicate that the polygonal model can facilitate the teaching of metabolism when the structures of biomolecules are discussed. Overall, the polygonal model promoted contact with chemical structures, e.g. through drawing activities, and encouraged student-student dialog, thereby facilitating biochemical learning. © 2017 by The International Union of Biochemistry and Molecular Biology, 46(1):66-75, 2018. © 2017 The International Union of Biochemistry and Molecular Biology.
Representation and Incorporation of Close Others' Responses: The RICOR Model of Social Influence.
Smith, Eliot R; Mackie, Diane M
2015-08-03
We propose a new model of social influence, which can occur spontaneously and in the absence of typically assumed motives. We assume that perceivers routinely construct representations of other people's experiences and responses (beliefs, attitudes, emotions, and behaviors), when observing others' responses or simulating the responses of unobserved others. Like representations made accessible by priming, these representations may then influence the process that generates perceivers' own responses, without intention or awareness, especially when there is a strong social connection to the other. We describe evidence for the basic properties and important moderators of this process, which distinguish it from other mechanisms such as informational, normative, or social identity influence. The model offers new perspectives on the role of others' values in producing cultural differences, the persistence and power of stereotypes, the adaptive reasons for being influenced by others' responses, and the impact of others' views about the self. © 2015 by the Society for Personality and Social Psychology, Inc.
Directory of Open Access Journals (Sweden)
Akihiro T Sasaki
2012-08-01
Full Text Available Automatic mimicry is based on the tight linkage between motor and perception action representations in which internal models play a key role. Based on the anatomical connection, we hypothesized that the direct effective connectivity from the posterior superior temporal sulcus (pSTS to the ventral premotor area (PMv formed an inverse internal model, converting visual representation into a motor plan, and that reverse connectivity formed a forward internal model, converting the motor plan into a sensory outcome of action. To test this hypothesis, we employed dynamic causal-modeling analysis with functional magnetic-resonance imaging. Twenty-four normal participants underwent a change-detection task involving two visually-presented balls that were either manually rotated by the investigator’s right hand (‘Hand’ or automatically rotated. The effective connectivity from the pSTS to the PMv was enhanced by hand observation and suppressed by execution, corresponding to the inverse model. Opposite effects were observed from the PMv to the pSTS, suggesting the forward model. Additionally, both execution and hand observation commonly enhanced the effective connectivity from the pSTS to the inferior parietal lobule (IPL, the IPL to the primary sensorimotor cortex (S/M1, the PMv to the IPL, and the PMv to the S/M1. Representation of the hand action therefore was implemented in the motor system including the S/M1. During hand observation, effective connectivity toward the pSTS was suppressed whereas that toward the PMv and S/M1 was enhanced. Thus the action-representation network acted as a dynamic feedback-control system during action observation.
Sensitivity experiments to mountain representations in spectral models
Directory of Open Access Journals (Sweden)
U. Schlese
2000-06-01
Full Text Available This paper describes a set of sensitivity experiments to several formulations of orography. Three sets are considered: a "Standard" orography consisting of an envelope orography produced originally for the ECMWF model, a"Navy" orography directly from the US Navy data and a "Scripps" orography based on the data set originally compiled several years ago at Scripps. The last two are mean orographies which do not use the envelope enhancement. A new filtering technique for handling the problem of Gibbs oscillations in spectral models has been used to produce the "Navy" and "Scripps" orographies, resulting in smoother fields than the "Standard" orography. The sensitivity experiments show that orography is still an important factor in controlling the model performance even in this class of models that use a semi-lagrangian formulation for water vapour, that in principle should be less sensitive to Gibbs oscillations than the Eulerian formulation. The largest impact can be seen in the stationary waves (asymmetric part of the geopotential at 500 mb where the differences in total height and spatial pattern generate up to 60 m differences, and in the surface fields where the Gibbs removal procedure is successful in alleviating the appearance of unrealistic oscillations over the ocean. These results indicate that Gibbs oscillations also need to be treated in this class of models. The best overall result is obtained using the "Navy" data set, that achieves a good compromise between amplitude of the stationary waves and smoothness of the surface fields.
Global atmospheric model for mercury including oxidation by bromine atoms
Directory of Open Access Journals (Sweden)
C. D. Holmes
2010-12-01
Full Text Available Global models of atmospheric mercury generally assume that gas-phase OH and ozone are the main oxidants converting Hg^{0} to Hg^{II} and thus driving mercury deposition to ecosystems. However, thermodynamic considerations argue against the importance of these reactions. We demonstrate here the viability of atomic bromine (Br as an alternative Hg^{0} oxidant. We conduct a global 3-D simulation with the GEOS-Chem model assuming gas-phase Br to be the sole Hg^{0} oxidant (Hg + Br model and compare to the previous version of the model with OH and ozone as the sole oxidants (Hg + OH/O_{3} model. We specify global 3-D Br concentration fields based on our best understanding of tropospheric and stratospheric Br chemistry. In both the Hg + Br and Hg + OH/O_{3} models, we add an aqueous photochemical reduction of Hg^{II} in cloud to impose a tropospheric lifetime for mercury of 6.5 months against deposition, as needed to reconcile observed total gaseous mercury (TGM concentrations with current estimates of anthropogenic emissions. This added reduction would not be necessary in the Hg + Br model if we adjusted the Br oxidation kinetics downward within their range of uncertainty. We find that the Hg + Br and Hg + OH/O_{3} models are equally capable of reproducing the spatial distribution of TGM and its seasonal cycle at northern mid-latitudes. The Hg + Br model shows a steeper decline of TGM concentrations from the tropics to southern mid-latitudes. Only the Hg + Br model can reproduce the springtime depletion and summer rebound of TGM observed at polar sites; the snowpack component of GEOS-Chem suggests that 40% of Hg^{II} deposited to snow in the Arctic is transferred to the ocean and land reservoirs, amounting to a net deposition flux to the Arctic of 60 Mg a^{−1}. Summertime events of depleted Hg^{0} at Antarctic sites due to subsidence are much better simulated by
Ontology and modeling patterns for state-based behavior representation
Castet, Jean-Francois; Rozek, Matthew L.; Ingham, Michel D.; Rouquette, Nicolas F.; Chung, Seung H.; Kerzhner, Aleksandr A.; Donahue, Kenneth M.; Jenkins, J. Steven; Wagner, David A.; Dvorak, Daniel L.;
2015-01-01
This paper provides an approach to capture state-based behavior of elements, that is, the specification of their state evolution in time, and the interactions amongst them. Elements can be components (e.g., sensors, actuators) or environments, and are characterized by state variables that vary with time. The behaviors of these elements, as well as interactions among them are represented through constraints on state variables. This paper discusses the concepts and relationships introduced in this behavior ontology, and the modeling patterns associated with it. Two example cases are provided to illustrate their usage, as well as to demonstrate the flexibility and scalability of the behavior ontology: a simple flashlight electrical model and a more complex spacecraft model involving instruments, power and data behaviors. Finally, an implementation in a SysML profile is provided.
Modeling and Representation of Human Hearts for Volumetric Measurement
Directory of Open Access Journals (Sweden)
Qiu Guan
2012-01-01
Full Text Available This paper investigates automatic construction of a three-dimensional heart model from a set of medical images, represents it in a deformable shape, and uses it to perform volumetric measurements. This not only significantly improves its reliability and accuracy but also makes it possible to derive valuable novel information, like various assessment and dynamic volumetric measurements. The method is based on a flexible model trained from hundreds of patient image sets by a genetic algorithm, which takes advantage of complete segmentation of the heart shape to form a geometrical heart model. For an image set of a new patient, an interpretation scheme is used to obtain its shape and evaluate some important parameters. Apart from automatic evaluation of traditional heart functions, some new information of cardiovascular diseases may be recognized from the volumetric analysis.
Thematic report: Macroeconomic models including specifically social and environmental aspects
Kratena, Kurt
2015-01-01
WWWforEurope Deliverable No. 8, 30 pages A significant reduction of the global environmental consequences of European consumption and production activities are the main objective of the policy simulations carried out in this paper. For this purpose three different modelling approaches have been chosen. Two macroeconomic models following the philosophy of consistent stock-flow accounting for the main institutional sectors (households, firms, banks, central bank and government) are used for...
Park, Eun-Jung; Choi, Kyunghee
2013-01-01
In general, mathematical representations such as formulae, numbers, and graphs are the inseparable components in science used to better describe or explain scientific phenomena or knowledge. Regardless of their necessity and benefit, science seems to be difficult for some students, as a result of the mathematical representations and problem…
Modeling a space-variant cortical representation for apparent motion.
Wurbs, Jeremy; Mingolla, Ennio; Yazdanbakhsh, Arash
2013-08-06
Receptive field sizes of neurons in early primate visual areas increase with eccentricity, as does temporal processing speed. The fovea is evidently specialized for slow, fine movements while the periphery is suited for fast, coarse movements. In either the fovea or periphery discrete flashes can produce motion percepts. Grossberg and Rudd (1989) used traveling Gaussian activity profiles to model long-range apparent motion percepts. We propose a neural model constrained by physiological data to explain how signals from retinal ganglion cells to V1 affect the perception of motion as a function of eccentricity. Our model incorporates cortical magnification, receptive field overlap and scatter, and spatial and temporal response characteristics of retinal ganglion cells for cortical processing of motion. Consistent with the finding of Baker and Braddick (1985), in our model the maximum flash distance that is perceived as an apparent motion (Dmax) increases linearly as a function of eccentricity. Baker and Braddick (1985) made qualitative predictions about the functional significance of both stimulus and visual system parameters that constrain motion perception, such as an increase in the range of detectable motions as a function of eccentricity and the likely role of higher visual processes in determining Dmax. We generate corresponding quantitative predictions for those functional dependencies for individual aspects of motion processing. Simulation results indicate that the early visual pathway can explain the qualitative linear increase of Dmax data without reliance on extrastriate areas, but that those higher visual areas may serve as a modulatory influence on the exact Dmax increase.
Probability density estimation in stochastic environmental models using reverse representations
Van den Berg, E.; Heemink, A.W.; Lin, H.X.; Schoenmakers, J.G.M.
2003-01-01
The estimation of probability densities of variables described by systems of stochastic dierential equations has long been done using forward time estimators, which rely on the generation of realizations of the model, forward in time. Recently, an estimator based on the combination of forward and
Using Structured Knowledge Representation for Context-Sensitive Probabilistic Modeling
2008-01-01
Morgan Kaufmann, 1988. [24] J. Pearl, Causality: Models, Reasoning, and Inference, Cambridge University Press, 2000. [25] J. Piaget , Piaget’s theory ...Gopnik, C. Glymour, D. M. Sobel, L. E. Schulz, T. Kushnir, D. Danks, A theory of causal learning in children: Causal maps and Bayes nets, Psychological
Hanson, C. V.; Schmidt, A.; Law, B. E.; Moore, W.
2015-12-01
The validity of land biosphere model outputs rely on accurate representations of ecosystem processes within the model. Typically, a vegetation or land cover type for a given area (several Km squared or larger resolution), is assumed to have uniform properties. The limited spacial and temporal resolution of models prevents resolving finer scale heterogeneous flux patterns that arise from variations in vegetation. This representation error must be quantified carefully if models are informed through data assimilation in order to assign appropriate weighting of model outputs and measurement data. The representation error is usually only estimated or ignored entirely due to the difficulty in determining reasonable values. UAS based gas sensors allow measurements of atmospheric CO2 concentrations with unprecedented spacial resolution, providing a means of determining the representation error for CO2 fluxes empirically. In this study we use three dimensional CO2 concentration data in combination with high resolution footprint analyses in order to quantify the representation error for modelled CO2 fluxes for typical resolutions of regional land biosphere models. CO2 concentration data were collected using an Atlatl X6A hexa-copter, carrying a highly calibrated closed path infra-red gas analyzer based sampling system with an uncertainty of ≤ ±0.2 ppm CO2. Gas concentration data was mapped in three dimensions using the UAS on-board position data and compared to footprints generated using WRF 3.61. Chad Hanson, Oregon State University, Corvallis, OR Andres Schmidt, Oregon State University, Corvallis, OR Bev Law, Oregon State University, Corvallis, OR
Representation of Dissolved Organic Carbon in the JULES Dynamic Global Vegetation Model
Nakhavali, Mahdi; Friedlingstein, Pierre; Guenet, Bertrand; Ciais, Philip
2017-04-01
Current global models of the carbon cycle consider only vertical gas exchanges between terrestrial or oceanic reservoirs and the atmosphere, hence not considering lateral transport of carbon from the continent to the oceans. This also means that such models implicitly consider that all the CO2 which is not respired to the atmosphere is stored on land, hence overestimating the land sink of carbon. Moving toward a boundless carbon cycle that is integrating the whole continuum from land to ocean to atmosphere is needed in order to better understand Earth's carbon cycle and to make more reliable projection of its future. Here we present an original representation of Dissolved Organic Carbon (DOC) processes in the Joint UK Land Environment Simulator (JULES). The standard version of JULES represent energy, water and carbon cycles and exchanges with the atmosphere, but only account for water run-off, not including export of carbon from terrestrial ecosystems to the aquatic environments. The aim of the project is to include in JULES a representation of DOC production in terrestrial soils, due to incomplete decomposition of organic matter, its decomposition to the atmosphere, and its export to the river network by leaching. In new developed version of JULES (JULES-DOCM), DOC pools, based on their decomposition rate, are classified into labile and recalcitrant within 3 meters of soil. Based on turnover rate, DOC coming from plant material pools and microbial biomass is directed to labile pool, while DOC from humus is directed to recalcitrant pool. Both of these pools have free (dissolved) and locked (adsorbed) form where just the free pool is subjected to decomposition and leaching. DOC production and decomposition are controlled by rate modifiers (moisture, temperature, vegetation fraction and decomposition rate) at each soil layer. Decomposed DOC is released to the atmosphere following a fixed carbon use efficiency. Leaching accounts for both surface (runoff) and
The Bogolubov Representation of the Polaron Model and Its Completely Integrable RPA-Approximation
International Nuclear Information System (INIS)
Bogolubov, Nikolai N. Jr.; Prykarpatsky, Yarema A.; Ghazaryan, Anna A.
2009-12-01
The polaron model in ionic crystal is studied in the N. Bogolubov representation using a special RPA-approximation. A new exactly solvable approximated polaron model is derived and described in detail. Its free energy at finite temperature is calculated analytically. The polaron free energy in the constant magnetic field at finite temperature is also discussed. Based on the structure of the N. Bogolubov unitary transformed polaron Hamiltonian a very important new result is stated: the full polaron model is exactly solvable. (author)
Solano, Javier; Duarte, José; Vargas, Erwin; Cabrera, Jhon; Jácome, Andrés; Botero, Mónica; Rey, Juan
2016-10-01
This paper addresses the Energetic Macroscopic Representation EMR, the modelling and the control of photovoltaic panel PVP generation systems for simulation purposes. The model of the PVP considers the variations on irradiance and temperature. A maximum power point tracking MPPT algorithm is considered to control the power converter. A novel EMR is proposed to consider the dynamic model of the PVP with variations in the irradiance and the temperature. The EMR is evaluated through simulations of a PVP generation system.
Minimal representations of supersymmetry and 1D N-extended σ-models
International Nuclear Information System (INIS)
Toppan, Francesco
2008-01-01
We discuss the minimal representations of the 1D N-Extended Supersymmetry algebra (the Z 2 -graded symmetry algebra of the Supersymmetric Quantum Mechanics) linearly realized on a finite number of fields depending on a real parameter t, the time. Their knowledge allows to construct one-dimensional sigma-models with extended off-shell supersymmetries without using superfields (author)
Deliyianni, Eleni; Gagatsis, Athanasios; Elia, Iliada; Panaoura, Areti
2016-01-01
The aim of this study was to propose and validate a structural model in fraction and decimal number addition, which is founded primarily on a synthesis of major theoretical approaches in the field of representations in Mathematics and also on previous research on the learning of fractions and decimals. The study was conducted among 1,701 primary…
Strickland, Amanda M.; Kraft, Adam; Bhattacharyya, Gautam
2010-01-01
As part of our investigations into the development of representational competence, we report results from a study in which we elicited sixteen graduate students' expressed mental models of commonly-used terms for describing organic reactions--functional group, nucleophile/electrophile, acid/base--and for diagrams of transformations and their…
Identifying Clusters with Mixture Models that Include Radial Velocity Observations
Czarnatowicz, Alexis; Ybarra, Jason E.
2018-01-01
The study of stellar clusters plays an integral role in the study of star formation. We present a cluster mixture model that considers radial velocity data in addition to spatial data. Maximum likelihood estimation through the Expectation-Maximization (EM) algorithm is used for parameter estimation. Our mixture model analysis can be used to distinguish adjacent or overlapping clusters, and estimate properties for each cluster.Work supported by awards from the Virginia Foundation for Independent Colleges (VFIC) Undergraduate Science Research Fellowship and The Research Experience @Bridgewater (TREB).
Some isomorphic function and Fock space representations of the dual model superconformal group
International Nuclear Information System (INIS)
Horsley, R.
1977-12-01
The dual model superconformal group is first constructed as the set of transformations which preserve up to a variable factor a suitably defined metric in a superspace (Z, theta) where Z is (essentially) a complex number and theta is a Grassmann parameter. This means one has a graded Lie group. Superfunctions are then found which enable some super unitary representations to be constructed. This necessitates the introduction of enlarged matrices - some submatrices of which are composed of Grassmann elements. Finally isomorphic (up to a factor) Fock space representations are exhibited. (Auth.)
Updating representation of land surface-atmosphere feedbacks in airborne campaign modeling analysis
Huang, M.; Carmichael, G. R.; Crawford, J. H.; Chan, S.; Xu, X.; Fisher, J. A.
2017-12-01
An updated modeling system to support airborne field campaigns is being built at NASA Ames Pleiades, with focus on adjusting the representation of land surface-atmosphere feedbacks. The main updates, referring to previous experiences with ARCTAS-CARB and CalNex in the western US to study air pollution inflows, include: 1) migrating the WRF (Weather Research and Forecasting) coupled land surface model from Noah to improved/more complex models especially Noah-MP and Rapid Update Cycle; 2) enabling the WRF land initialization with suitably spun-up land model output; 3) incorporating satellite land cover, vegetation dynamics, and soil moisture data (i.e., assimilating Soil Moisture Active Passive data using the ensemble Kalman filter approach) into WRF. Examples are given of comparing the model fields with available aircraft observations during spring-summer 2016 field campaigns taken place at the eastern side of continents (KORUS-AQ in South Korea and ACT-America in the eastern US), the air pollution export regions. Under fair weather and stormy conditions, air pollution vertical distributions and column amounts, as well as the impact from land surface, are compared. These help identify challenges and opportunities for LEO/GEO satellite remote sensing and modeling of air quality in the northern hemisphere. Finally, we briefly show applications of this system on simulating Australian conditions, which would explore the needs for further development of the observing system in the southern hemisphere and inform the Clean Air and Urban Landscapes (https://www.nespurban.edu.au) modelers.
Weck, Philippe F; Kim, Eunja; Wang, Yifeng; Kruichak, Jessica N; Mills, Melissa M; Matteo, Edward N; Pellenq, Roland J-M
2017-08-01
Molecular structures of kerogen control hydrocarbon production in unconventional reservoirs. Significant progress has been made in developing model representations of various kerogen structures. These models have been widely used for the prediction of gas adsorption and migration in shale matrix. However, using density functional perturbation theory (DFPT) calculations and vibrational spectroscopic measurements, we here show that a large gap may still remain between the existing model representations and actual kerogen structures, therefore calling for new model development. Using DFPT, we calculated Fourier transform infrared (FTIR) spectra for six most widely used kerogen structure models. The computed spectra were then systematically compared to the FTIR absorption spectra collected for kerogen samples isolated from Mancos, Woodford and Marcellus formations representing a wide range of kerogen origin and maturation conditions. Limited agreement between the model predictions and the measurements highlights that the existing kerogen models may still miss some key features in structural representation. A combination of DFPT calculations with spectroscopic measurements may provide a useful diagnostic tool for assessing the adequacy of a proposed structural model as well as for future model development. This approach may eventually help develop comprehensive infrared (IR)-fingerprints for tracing kerogen evolution.
Zhou, Shanglin; Migliore, Michele; Yu, Yuguo
2016-01-01
Prior odor experience has a profound effect on the coding of new odor inputs by animals. The olfactory bulb, the first relay of the olfactory pathway, can substantially shape the representations of odor inputs. How prior odor experience affects the representation of new odor inputs in olfactory bulb and its underlying network mechanism are still unclear. Here we carried out a series of simulations based on a large-scale realistic mitral-granule network model and found that prior odor experience not only accelerated formation of the network, but it also significantly strengthened sparse responses in the mitral cell network while decreasing sparse responses in the granule cell network. This modulation of sparse representations may be due to the increase of inhibitory synaptic weights. Correlations among mitral cells within the network and correlations between mitral network responses to different odors decreased gradually when the number of prior training odors was increased, resulting in a greater decorrelation of the bulb representations of input odors. Based on these findings, we conclude that the degree of prior odor experience facilitates degrees of sparse representations of new odors by the mitral cell network through experience-enhanced inhibition mechanism. PMID:26903819
Unsteady panel method for complex configurations including wake modeling
CSIR Research Space (South Africa)
Van Zyl, Lourens H
2008-01-01
Full Text Available The calculation of unsteady air loads is an essential step in any aeroelastic analysis. The subsonic doublet lattice method (DLM) is used extensively for this purpose due to its simplicity and reliability. The body models available with the popular...
Modeling biological tissue growth: discrete to continuum representations.
Hywood, Jack D; Hackett-Jones, Emily J; Landman, Kerry A
2013-09-01
There is much interest in building deterministic continuum models from discrete agent-based models governed by local stochastic rules where an agent represents a biological cell. In developmental biology, cells are able to move and undergo cell division on and within growing tissues. A growing tissue is itself made up of cells which undergo cell division, thereby providing a significant transport mechanism for other cells within it. We develop a discrete agent-based model where domain agents represent tissue cells. Each agent has the ability to undergo a proliferation event whereby an additional domain agent is incorporated into the lattice. If a probability distribution describes the waiting times between proliferation events for an individual agent, then the total length of the domain is a random variable. The average behavior of these stochastically proliferating agents defining the growing lattice is determined in terms of a Fokker-Planck equation, with an advection and diffusion term. The diffusion term differs from the one obtained Landman and Binder [J. Theor. Biol. 259, 541 (2009)] when the rate of growth of the domain is specified, but the choice of agents is random. This discrepancy is reconciled by determining a discrete-time master equation for this process and an associated asymmetric nonexclusion random walk, together with consideration of synchronous and asynchronous updating schemes. All theoretical results are confirmed with numerical simulations. This study furthers our understanding of the relationship between agent-based rules, their implementation, and their associated partial differential equations. Since tissue growth is a significant cellular transport mechanism during embryonic growth, it is important to use the correct partial differential equation description when combining with other cellular functions.
Delay correlation analysis and representation for vital complaint VHDL models
Rich, Marvin J.; Misra, Ashutosh
2004-11-09
A method and system unbind a rise/fall tuple of a VHDL generic variable and create rise time and fall time generics of each generic variable that are independent of each other. Then, according to a predetermined correlation policy, the method and system collect delay values in a VHDL standard delay file, sort the delay values, remove duplicate delay values, group the delay values into correlation sets, and output an analysis file. The correlation policy may include collecting all generic variables in a VHDL standard delay file, selecting each generic variable, and performing reductions on the set of delay values associated with each selected generic variable.
Munez, David; Orrantia, Josetxu; Rosales, Javier
2013-01-01
This study explored the effectiveness of external representations presented together with compare word problems, and whether such effectiveness was moderated by working memory. Participants were 49 secondary school students. Each participant solved 48 problems presented in 4 presentation types that included 2 difficulty treatments (number of steps…
A thermal lens model including the Soret effect
International Nuclear Information System (INIS)
Cabrera, Humberto; Sira, Eloy; Rahn, Kareem; Garcia-Sucre, Maximo
2009-01-01
In this letter we generalize the thermal lens model to account for the Soret effect in binary liquid mixtures. This formalism permits the precise determination of the Soret coefficient in a steady-state situation. The theory is experimentally verified using the measured values in the ethanol/water mixtures. The time evolution of the Soret signal has been used to derive mass-diffusion times from which mass-diffusion coefficients were calculated. (Author)
Including lateral interactions into microkinetic models of catalytic reactions
DEFF Research Database (Denmark)
Hellman, Anders; Honkala, Johanna Karoliina
2007-01-01
In many catalytic reactions lateral interactions between adsorbates are believed to have a strong influence on the reaction rates. We apply a microkinetic model to explore the effect of lateral interactions and how to efficiently take them into account in a simple catalytic reaction. Three differ...... different approximations are investigated: site, mean-field, and quasichemical approximations. The obtained results are compared to accurate Monte Carlo numbers. In the end, we apply the approximations to a real catalytic reaction, namely, ammonia synthesis....
A stochastic model of gene expression including splicing events
Penim, Flávia Alexandra Mendes
2014-01-01
Tese de mestrado, Bioinformática e Biologia Computacional, Universidade de Lisboa, Faculdade de Ciências, 2014 Proteins carry out the great majority of the catalytic and structural work within an organism. The RNA templates used in their synthesis determines their identity, and this is dictated by which genes are transcribed. Therefore, gene expression is the fundamental determinant of an organism’s nature. The main objective of this thesis was to develop a stochastic computational model a...
A knowledge representation model for the optimisation of electricity generation mixes
International Nuclear Information System (INIS)
Chee Tahir, Aidid; Bañares-Alcántara, René
2012-01-01
Highlights: ► Prototype energy model which uses semantic representation (ontologies). ► Model accepts both quantitative and qualitative based energy policy goals. ► Uses logic inference to formulate equations for linear optimisation. ► Proposes electricity generation mix based on energy policy goals. -- Abstract: Energy models such as MARKAL, MESSAGE and DNE-21 are optimisation tools which aid in the formulation of energy policies. The strength of these models lie in their solid theoretical foundations built on rigorous mathematical equations designed to process numerical (quantitative) data related to economics and the environment. Nevertheless, a complete consideration of energy policy issues also requires the consideration of the political and social aspects of energy. These political and social issues are often associated with non-numerical (qualitative) information. To enable the evaluation of these aspects in a computer model, we hypothesise that a different approach to energy model optimisation design is required. A prototype energy model that is based on a semantic representation using ontologies and is integrated to engineering models implemented in Java has been developed. The model provides both quantitative and qualitative evaluation capabilities through the use of logical inference. The semantic representation of energy policy goals is used (i) to translate a set of energy policy goals into a set of logic queries which is then used to determine the preferred electricity generation mix and (ii) to assist in the formulation of a set of equations which is then solved in order to obtain a proposed electricity generation mix. Scenario case studies have been developed and tested on the prototype energy model to determine its capabilities. Knowledge queries were made on the semantic representation to determine an electricity generation mix which fulfilled a set of energy policy goals (e.g. CO 2 emissions reduction, water conservation, energy supply
A model of algorithmic representation of a business process
Directory of Open Access Journals (Sweden)
E. I. Koshkarova
2014-01-01
Full Text Available This article presents and justifies the possibility of developing a method for estimation and optimization of an enterprise business processes; the proposed method is based on identity of two notions – an algorithm and a business process. The described method relies on extraction of a recursive model from the business process, based on the example of one process automated by the BPM system and further estimation and optimization of that process in accordance with estimation and optimization techniques applied to algorithms. The results of this investigation could be used by experts working in the field of reengineering of enterprise business processes, automation of business processes along with development of enterprise informational systems.
Landau quantized dynamics and spectra for group-VI dichalcogenides, including a model quantum wire
Horing, Norman J. M.
2017-06-01
This work is concerned with the derivation of the Green's function for Landau-quantized carriers in the Group-VI dichalcogenides. In the spatially homogeneous case, the Green's function is separated into a Peierls phase factor and a translationally invariant part which is determined in a closed form integral representation involving only elementary functions. The latter is expanded in an eigenfunction series of Laguerre polynomials. These results for the retarded Green's function are presented in both position and momentum representations, and yet another closed form representation is derived in circular coordinates in terms of the Bessel wave function of the second kind (not to be confused with the Bessel function). The case of a quantum wire is also addressed, representing the quantum wire in terms of a model one-dimensional δ (x ) -potential profile. This retarded Green's function for propagation directly along the wire is determined exactly in terms of the corresponding Green's function for the system without the δ (x ) -potential, and the Landau quantized eigenenergy dispersion relation is examined. The thermodynamic Green's function for the dichalcogenide carriers in a normal magnetic field is formulated here in terms of its spectral weight, and its solution is presented in a momentum/integral representation involving only elementary functions, which is subsequently expanded in Laguerre eigenfunctions and presented in both momentum and position representations.
Landau quantized dynamics and spectra for group-VI dichalcogenides, including a model quantum wire
Directory of Open Access Journals (Sweden)
Norman J. M. Horing
2017-06-01
Full Text Available This work is concerned with the derivation of the Green’s function for Landau-quantized carriers in the Group-VI dichalcogenides. In the spatially homogeneous case, the Green’s function is separated into a Peierls phase factor and a translationally invariant part which is determined in a closed form integral representation involving only elementary functions. The latter is expanded in an eigenfunction series of Laguerre polynomials. These results for the retarded Green’s function are presented in both position and momentum representations, and yet another closed form representation is derived in circular coordinates in terms of the Bessel wave function of the second kind (not to be confused with the Bessel function. The case of a quantum wire is also addressed, representing the quantum wire in terms of a model one-dimensional δ(x-potential profile. This retarded Green’s function for propagation directly along the wire is determined exactly in terms of the corresponding Green’s function for the system without the δ(x-potential, and the Landau quantized eigenenergy dispersion relation is examined. The thermodynamic Green’s function for the dichalcogenide carriers in a normal magnetic field is formulated here in terms of its spectral weight, and its solution is presented in a momentum/integral representation involving only elementary functions, which is subsequently expanded in Laguerre eigenfunctions and presented in both momentum and position representations.
The quantum Rabi model and Lie algebra representations of sl2
International Nuclear Information System (INIS)
Wakayama, Masato; Yamasaki, Taishi
2014-01-01
The aim of the present paper is to understand the spectral problem of the quantum Rabi model in terms of Lie algebra representations of sl 2 (R). We define a second order element of the universal enveloping algebra U(sl 2 ) of sl 2 (R), which, through the image of a principal series representation of sl 2 (R), provides a picture equivalent to the quantum Rabi model drawn by confluent Heun differential equations. By this description, in particular, we give a representation theoretic interpretation of the degenerate part of the spectrum (i.e., Judd's eigenstates) of the Rabi Hamiltonian due to Kuś in 1985, which is a part of the exceptional spectrum parameterized by integers. We also discuss the non-degenerate part of the exceptional spectrum of the model, in addition to the Judd eigenstates, from a viewpoint of infinite dimensional irreducible submodules (or subquotients) of the non-unitary principal series such as holomorphic discrete series representations of sl 2 (R). (paper)
Representation of dissolved organic carbon in the JULES land surface model (vn4.4_JULES-DOCM
Directory of Open Access Journals (Sweden)
M. Nakhavali
2018-02-01
Full Text Available Current global models of the carbon (C cycle consider only vertical gas exchanges between terrestrial or oceanic reservoirs and the atmosphere, thus not considering the lateral transport of carbon from the continents to the oceans. Therefore, those models implicitly consider all of the C which is not respired to the atmosphere to be stored on land and hence overestimate the land C sink capability. A model that represents the whole continuum from atmosphere to land and into the ocean would provide a better understanding of the Earth's C cycle and hence more reliable historical or future projections. A first and critical step in that direction is to include processes representing the production and export of dissolved organic carbon in soils. Here we present an original representation of dissolved organic C (DOC processes in the Joint UK Land Environment Simulator (JULES-DOCM that integrates a representation of DOC production in terrestrial ecosystems based on the incomplete decomposition of organic matter, DOC decomposition within the soil column, and DOC export to the river network via leaching. The model performance is evaluated in five specific sites for which observations of soil DOC concentration are available. Results show that the model is able to reproduce the DOC concentration and controlling processes, including leaching to the riverine system, which is fundamental for integrating terrestrial and aquatic ecosystems. Future work should include the fate of exported DOC in the river system as well as DIC and POC export from soil.
Representation of dissolved organic carbon in the JULES land surface model (vn4.4_JULES-DOCM)
Nakhavali, Mahdi; Friedlingstein, Pierre; Lauerwald, Ronny; Tang, Jing; Chadburn, Sarah; Camino-Serrano, Marta; Guenet, Bertrand; Harper, Anna; Walmsley, David; Peichl, Matthias; Gielen, Bert
2018-02-01
Current global models of the carbon (C) cycle consider only vertical gas exchanges between terrestrial or oceanic reservoirs and the atmosphere, thus not considering the lateral transport of carbon from the continents to the oceans. Therefore, those models implicitly consider all of the C which is not respired to the atmosphere to be stored on land and hence overestimate the land C sink capability. A model that represents the whole continuum from atmosphere to land and into the ocean would provide a better understanding of the Earth's C cycle and hence more reliable historical or future projections. A first and critical step in that direction is to include processes representing the production and export of dissolved organic carbon in soils. Here we present an original representation of dissolved organic C (DOC) processes in the Joint UK Land Environment Simulator (JULES-DOCM) that integrates a representation of DOC production in terrestrial ecosystems based on the incomplete decomposition of organic matter, DOC decomposition within the soil column, and DOC export to the river network via leaching. The model performance is evaluated in five specific sites for which observations of soil DOC concentration are available. Results show that the model is able to reproduce the DOC concentration and controlling processes, including leaching to the riverine system, which is fundamental for integrating terrestrial and aquatic ecosystems. Future work should include the fate of exported DOC in the river system as well as DIC and POC export from soil.
Parton recombination model including resonance production. RL-78-040
International Nuclear Information System (INIS)
Roberts, R.G.; Hwa, R.C.; Matsuda, S.
1978-05-01
Possible effects of resonance production on the meson inclusive distribution in the fragmentation region are investigated in the framework of the parton recombination model. From a detailed study of the data on vector-meson production, a reliable ratio of the vector-to-pseudoscalar rates is determined. Then the influence of the decay of the vector mesons on the pseudoscalar spectrum is examined, and the effect found to be no more than 25% for x > 0.5. The normalization of the non-strange antiquark distributions are still higher than those in a quiescent proton. The agreement between the calculated results and data remain very good. 36 references
Improving the representation of soluble iron in climate models
Energy Technology Data Exchange (ETDEWEB)
Mahowald, Natalie [Cornell Univ., Ithaca, NY (United States)
2016-11-29
Funding from this grant supported Rachel Sanza, Yan Zhang and partially Samuel Albani. Substantial progress has been made on inclusion of mineralogy, showing the quality of the simulations, and the impact on radiation in the CAM4 and CAM5 (Scanza et al., 2015). In addition, the elemental distribution has been evaluated (and partially supported by this grant) (Zhang et al., 2015), showing that using spatial distributions of mineralogy, improved resperentation of Fe, Ca and Al are possible, compared to the limited available data. A new intermediate complexity soluble iron scheme was implemented in the Bulk Aerosol Model (BAM), which was completed as part of Rachel Scanza’s PhD thesis. Currently Rachel is writing up at least two first author papers describing the general methods and comparison to observations (Scanza et al., in prep.), as well as papers describing the sensitivity to preindustrial conditions and interannual variability. This work lead to the lead PI being asked to write a commentary in Nature (Mahowald, 2013) and two review papers (Mahowald et al., 2014, Mahowald et al., submitted) and contributed to related papers (Albani et al., 2016, Albani et al., 2014, Albani et al., 2015).
Extending PSA models including ageing and asset management - 15291
International Nuclear Information System (INIS)
Martorell, S.; Marton, I.; Carlos, S.; Sanchez, A.I.
2015-01-01
This paper proposes a new approach to Ageing Probabilistic Safety Assessment (APSA) modelling, which is intended to be used to support risk-informed decisions on the effectiveness of maintenance management programs and technical specification requirements of critical equipment of Nuclear Power Plants (NPP) within the framework of the Risk Informed Decision Making according to R.G. 1.174 principles. This approach focuses on the incorporation of not only equipment ageing but also effectiveness of maintenance and efficiency of surveillance testing explicitly into APSA models and data. This methodology is applied to a motor-operated valve of the auxiliary feed water system (AFWS) of a PWR. This simple example of application focuses on a critical safety-related equipment of a NPP in order to evaluate the risk impact of considering different approaches to APSA and the combined effect of equipment ageing and maintenance and testing alternatives along NPP design life. The risk impact of several alternatives in maintenance strategy is discussed
Improving Representation of the Nitrous Oxide Cycle in Ocean Biogeochemical Models
Suntharalingam, P.; Buitenhuis, E.; Le Quere, C.; O'Meara, S.; Nevison, C. D.; Bange, H. W.; Butler, J. H.; Elkins, J. W.
2011-12-01
The processes governing the marine nitrous oxide cycle, oceanic distribution, and flux to the atmosphere display distinct heterogeneity. The primary pathway for N2O production in the oxygenated open ocean is believed to be nitrification during the oxidation of ammonium to nitrate. However, mechanisms of marine N2O production and consumption display significant sensitivity to local oxygen concentration. Oxygen minimum zones such as the Arabian Sea and Eastern Equatorial Pacific are characterized by large gradients in sub-surface N2O, and high rates of N2O turnover that significantly exceed those observed in the open ocean. A range of processes is believed to govern N2O formation in these regions, including enhanced nitrification, and a coupling of nitrification and denitrification pathways. N2O is also depleted via denitrification in anoxic zones. This spatial heterogeneity presents challenges to the development of effective model parameterizations for ocean N2O; i.e., parameterizations that also display reliable predictive capability under conditions of changing ocean circulation, productivity, and oxygen distribution. In this analysis we use the ocean biogeochemistry model NEMO-PlankTOM to evaluate a range of recent empirical parameterizations for marine N2O formation. We contrast these parameterizations with a recently developed process-based model of oceanic N2O. Simulations are evaluated using a global database of oceanic N2O measurements. Evaluation metrics include surface concentrations, depth profiles, and regional averages. We also discuss the challenges of developing a successful representation of the marine N2O cycle, given specific limitations of the present generation of global ocean biogeochemistry models.
Evaluation and Sensitivity of Climate Model Representation of Upper Arctic Hydrography
DiMaggio, D.; Maslowski, W.; Osinski, R.; Roberts, A.; Clement Kinney, J. L.; Frants, M.
2016-12-01
The satellite-derived rate of Arctic sea ice extent decline for the past decades is faster than those simulated by the models participating in the Coupled Model Intercomparison Project (CMIP5). In addition, time-varying Arctic sea ice concentration and thickness distribution in those models are often poorly represented, suggesting that predicted sea ice decline might be modeled in the wrong place or time and for the wrong reasons. We hypothesize that these limitations are in part the result of an inadequate representation of critical high-latitude processes controlling the accumulation and distribution of sub-surface oceanic heat content and its interaction with the sea ice cover, especially in the western Arctic. For the purpose of this study, we define the sub-surface ocean as that below the surface mixed layer and above the Atlantic layer. Those limitations are evidenced in the CMIP5 multi-model mean exhibiting a cold temperature bias near the surface and a warm bias at intermediate depths. In particular, CMIP5 models are found to be inadequately representing the key features of the upper ocean hydrography in the Canada Basin, including the near-surface temperature maximum (NSTM) and the secondary temperature maximum associated with Pacific Summer Water (PSW). To identify the sensitivity of upper Arctic Ocean hydrography to physical processes and model configurations, a series of experiments are performed using the Regional Arctic System Model (RASM), a high-resolution, fully-coupled regional climate model. Analysis of RASM output suggests that surface momentum coupling (air-ice, ice-ocean, and air-ocean) and brine-rejection parameterization strongly influence thermohaline structure down to 700 m. The implementation of elastic anisotropic plastic sea ice rheology improves mixed layer properties, which is also sensitive to changes in numerical convective viscosity and diffusivity. Sea ice formation during model spin-up essentially destroys the initial
Founder’s model: Representation of a maquette or the church?
Directory of Open Access Journals (Sweden)
Marković Čedomila
2007-01-01
Full Text Available The text deals with some terminological problems concerning the so-called founder’s model. Although it is commonly used to designate the depicted architecture in the hand of the church founder, the expression 'founder’s (ktetor’s model' is often confusing and misleading. The main question is whether the Byzantine architects used actual model/maquettes for constructing their churches and if so, could these models/ maquettes have been used for the architecture depicted in founders’ portraits? In other worlds is the representation in the donor’s hand the image of a built church or its maquette, produced as a project model? The different aspects of the problem we analyzed - the legal, technical and symbolic functions of these representations support our assumption that the architectural design model/maquette did not serve as a specimen for representations of architecture on founder’s portraits. This specific type of architecture depicted was created after the building itself was completed.
Coden, Anni; Savova, Guergana; Sominsky, Igor; Tanenblatt, Michael; Masanz, James; Schuler, Karin; Cooper, James; Guan, Wei; de Groen, Piet C
2009-10-01
We introduce an extensible and modifiable knowledge representation model to represent cancer disease characteristics in a comparable and consistent fashion. We describe a system, MedTAS/P which automatically instantiates the knowledge representation model from free-text pathology reports. MedTAS/P is based on an open-source framework and its components use natural language processing principles, machine learning and rules to discover and populate elements of the model. To validate the model and measure the accuracy of MedTAS/P, we developed a gold-standard corpus of manually annotated colon cancer pathology reports. MedTAS/P achieves F1-scores of 0.97-1.0 for instantiating classes in the knowledge representation model such as histologies or anatomical sites, and F1-scores of 0.82-0.93 for primary tumors or lymph nodes, which require the extractions of relations. An F1-score of 0.65 is reported for metastatic tumors, a lower score predominantly due to a very small number of instances in the training and test sets.
A Land System representation for global assessments and land-use modeling.
van Asselen, Sanneke; Verburg, Peter H
2012-10-01
Current global scale land-change models used for integrated assessments and climate modeling are based on classifications of land cover. However, land-use management intensity and livestock keeping are also important aspects of land use, and are an integrated part of land systems. This article aims to classify, map, and to characterize Land Systems (LS) at a global scale and analyze the spatial determinants of these systems. Besides proposing such a classification, the article tests if global assessments can be based on globally uniform allocation rules. Land cover, livestock, and agricultural intensity data are used to map LS using a hierarchical classification method. Logistic regressions are used to analyze variation in spatial determinants of LS. The analysis of the spatial determinants of LS indicates strong associations between LS and a range of socioeconomic and biophysical indicators of human-environment interactions. The set of identified spatial determinants of a LS differs among regions and scales, especially for (mosaic) cropland systems, grassland systems with livestock, and settlements. (Semi-)Natural LS have more similar spatial determinants across regions and scales. Using LS in global models is expected to result in a more accurate representation of land use capturing important aspects of land systems and land architecture: the variation in land cover and the link between land-use intensity and landscape composition. Because the set of most important spatial determinants of LS varies among regions and scales, land-change models that include the human drivers of land change are best parameterized at sub-global level, where similar biophysical, socioeconomic and cultural conditions prevail in the specific regions. © 2012 Blackwell Publishing Ltd.
Neth, Donald; Martinez, Aleix M
2010-08-06
Research suggests that configural cues (second-order relations) play a major role in the representation and classification of face images; making faces a "special" class of objects, since object recognition seems to use different encoding mechanisms. It is less clear, however, how this representation emerges and whether this representation is also used in the recognition of facial expressions of emotion. In this paper, we show how configural cues emerge naturally from a classical analysis of shape in the recognition of anger and sadness. In particular our results suggest that at least two of the dimensions of the computational (cognitive) space of facial expressions of emotion correspond to pure configural changes. The first of these dimensions measures the distance between the eyebrows and the mouth, while the second is concerned with the height-width ratio of the face. Under this proposed model, becoming a face "expert" would mean to move from the generic shape representation to that based on configural cues. These results suggest that the recognition of facial expressions of emotion shares this expertise property with the other processes of face processing. Copyright 2010 Elsevier Ltd. All rights reserved.
On the Representation of Subgrid Microtopography Effects in Process-based Hydrologic Models
Jan, A.; Painter, S. L.; Coon, E. T.
2017-12-01
Increased availability of high-resolution digital elevation are enabling process-based hydrologic modeling on finer and finer scales. However, spatial variability in surface elevation (microtopography) exists below the scale of a typical hyper-resolution grid cell and has the potential to play a significant role in water retention, runoff, and surface/subsurface interactions. Though the concept of microtopographic features (depressions, obstructions) and the associated implications on flow and discharge are well established, representing those effects in watershed-scale integrated surface/subsurface hydrology models remains a challenge. Using the complex and coupled hydrologic environment of the Arctic polygonal tundra as an example, we study the effects of submeter topography and present a subgrid model parameterized by small-scale spatial heterogeneities for use in hyper-resolution models with polygons at a scale of 15-20 meters forming the surface cells. The subgrid model alters the flow and storage terms in the diffusion wave equation for surface flow. We compare our results against sub-meter scale simulations (acts as a benchmark for our simulations) and hyper-resolution models without the subgrid representation. The initiation of runoff in the fine-scale simulations is delayed and the recession curve is slowed relative to simulated runoff using the hyper-resolution model with no subgrid representation. Our subgrid modeling approach improves the representation of runoff and water retention relative to models that ignore subgrid topography. We evaluate different strategies for parameterizing subgrid model and present a classification-based method to efficiently move forward to larger landscapes. This work was supported by the Interoperable Design of Extreme-scale Application Software (IDEAS) project and the Next-Generation Ecosystem Experiments-Arctic (NGEE Arctic) project. NGEE-Arctic is supported by the Office of Biological and Environmental Research in the
Hu, Eric Y; Bouteiller, Jean-Marie C; Song, Dong; Baudry, Michel; Berger, Theodore W
2015-01-01
Chemical synapses are comprised of a wide collection of intricate signaling pathways involving complex dynamics. These mechanisms are often reduced to simple spikes or exponential representations in order to enable computer simulations at higher spatial levels of complexity. However, these representations cannot capture important nonlinear dynamics found in synaptic transmission. Here, we propose an input-output (IO) synapse model capable of generating complex nonlinear dynamics while maintaining low computational complexity. This IO synapse model is an extension of a detailed mechanistic glutamatergic synapse model capable of capturing the input-output relationships of the mechanistic model using the Volterra functional power series. We demonstrate that the IO synapse model is able to successfully track the nonlinear dynamics of the synapse up to the third order with high accuracy. We also evaluate the accuracy of the IO synapse model at different input frequencies and compared its performance with that of kinetic models in compartmental neuron models. Our results demonstrate that the IO synapse model is capable of efficiently replicating complex nonlinear dynamics that were represented in the original mechanistic model and provide a method to replicate complex and diverse synaptic transmission within neuron network simulations.
International Nuclear Information System (INIS)
Niccoli, G.
2009-12-01
In an earlier paper (G. Niccoli and J. Teschner, 2009), the spectrum (eigenvalues and eigenstates) of a lattice regularizations of the Sine-Gordon model has been completely characterized in terms of polynomial solutions with certain properties of the Baxter equation. This characterization for cyclic representations has been derived by the use of the Separation of Variables (SOV) method of Sklyanin and by the direct construction of the Baxter Q-operator family. Here, we reconstruct the Baxter Q-operator and the same characterization of the spectrum by only using the SOV method. This analysis allows us to deduce the main features required for the extension to cyclic representations of other integrable quantum models of this kind of spectrum characterization. (orig.)
Models and other Mental Representations in the Study of DNA by High School Students
Directory of Open Access Journals (Sweden)
Karen Cavalcanti Tauceda
2010-10-01
Full Text Available he study of models and mental representations is an important landmark in the research on science teaching. This inquiry took place in a state school with students in the 1st year of high school education in the subject of biology and analyzes the relation between the construction of meaningful learning and the use of figures from the Didactic Book (DB in an approach by Johnson-Laird. The results show that those students who did not use the figures in the DB during the learning process of scientific concepts (DNA replication presented a higher frequency of drawings with mental models. It discusses the relevance in the production of this type of mental representation when studying DNA in meaningful learning. This research also seeks to reflect on the DB methodology used in the classroom and points out some consequences for and limitations to students' learning.
Integration of MHD load models with circuit representations the Z generator.
Energy Technology Data Exchange (ETDEWEB)
Jennings, Christopher A.; Ampleford, David J.; Jones, Brent Manley; McBride, Ryan D.; Bailey, James E.; Jones, Michael C.; Gomez, Matthew Robert.; Cuneo, Michael Edward; Nakhleh, Charles; Stygar, William A.; Savage, Mark Edward; Wagoner, Timothy C.; Moore, James K.
2013-03-01
MHD models of imploding loads fielded on the Z accelerator are typically driven by reduced or simplified circuit representations of the generator. The performance of many of the imploding loads is critically dependent on the current and power delivered to them, so may be strongly influenced by the generators response to their implosion. Current losses diagnosed in the transmission lines approaching the load are further known to limit the energy delivery, while exhibiting some load dependence. Through comparing the convolute performance of a wide variety of short pulse Z loads we parameterize a convolute loss resistance applicable between different experiments. We incorporate this, and other current loss terms into a transmission line representation of the Z vacuum section. We then apply this model to study the current delivery to a wide variety of wire array and MagLif style liner loads.
Directory of Open Access Journals (Sweden)
Chao Yang
2018-03-01
Full Text Available An accurate and comprehensive representation of an observation task is a prerequisite in disaster monitoring to achieve reliable sensor observation planning. However, the extant disaster event or task information models do not fully satisfy the observation requirements for the accurate and efficient planning of remote-sensing satellite sensors. By considering the modeling requirements for a disaster observation task, we propose an observation task chain (OTChain representation model that includes four basic OTChain segments and eight-tuple observation task metadata description structures. A prototype system, namely OTChainManager, is implemented to provide functions for modeling, managing, querying, and visualizing observation tasks. In the case of flood water monitoring, we use a flood remote-sensing satellite sensor observation task for the experiment. The results show that the proposed OTChain representation model can be used in modeling process-owned flood disaster observation tasks. By querying and visualizing the flood observation task instances in the Jinsha River Basin, the proposed model can effectively express observation task processes, represent personalized observation constraints, and plan global remote-sensing satellite sensor observations. Compared with typical observation task information models or engines, the proposed OTChain representation model satisfies the information demands of the OTChain and its processes as well as impels the development of a long time-series sensor observation scheme.
Cho, Sun-Joo; Gilbert, Jennifer K; Goodwin, Amanda P
2013-10-01
This paper presents an explanatory multidimensional multilevel random item response model and its application to reading data with multilevel item structure. The model includes multilevel random item parameters that allow consideration of variability in item parameters at both item and item group levels. Item-level random item parameters were included to model unexplained variance remaining when item related covariates were used to explain variation in item difficulties. Item group-level random item parameters were included to model dependency in item responses among items having the same item stem. Using the model, this study examined the dimensionality of a person's word knowledge, termed lexical representation, and how aspects of morphological knowledge contributed to lexical representations for different persons, items, and item groups.
A geometrical representation of the interacting-boson model of nuclei
International Nuclear Information System (INIS)
Kiron, M.W.
1982-03-01
The representation of the interacting-boson-model Hamiltonian as a second-order differential operator in geometrical variables is studied in detail. It is shown that, with appropriate boundary conditions and biorthogonal weight functions, it reproduces exactly both the spectrum and matrix elements of operators of the algebraic boson model. It can be written in self-adjoint form and expanded in a symmetrized moment expansion, allowing the identification of collective mass parameters and energy surfaces, but differs in detail from conventional geometrical collective model. (author)
Chaouiya, Claudine; Bérenguier, Duncan; Keating, Sarah M; Naldi, Aurélien; van Iersel, Martijn P; Rodriguez, Nicolas; Dräger, Andreas; Büchel, Finja; Cokelaer, Thomas; Kowal, Bryan; Wicks, Benjamin; Gonçalves, Emanuel; Dorier, Julien; Page, Michel; Monteiro, Pedro T; von Kamp, Axel; Xenarios, Ioannis; de Jong, Hidde; Hucka, Michael; Klamt, Steffen; Thieffry, Denis; Le Novère, Nicolas; Saez-Rodriguez, Julio; Helikar, Tomáš
2013-12-10
Qualitative frameworks, especially those based on the logical discrete formalism, are increasingly used to model regulatory and signalling networks. A major advantage of these frameworks is that they do not require precise quantitative data, and that they are well-suited for studies of large networks. While numerous groups have developed specific computational tools that provide original methods to analyse qualitative models, a standard format to exchange qualitative models has been missing. We present the Systems Biology Markup Language (SBML) Qualitative Models Package ("qual"), an extension of the SBML Level 3 standard designed for computer representation of qualitative models of biological networks. We demonstrate the interoperability of models via SBML qual through the analysis of a specific signalling network by three independent software tools. Furthermore, the collective effort to define the SBML qual format paved the way for the development of LogicalModel, an open-source model library, which will facilitate the adoption of the format as well as the collaborative development of algorithms to analyse qualitative models. SBML qual allows the exchange of qualitative models among a number of complementary software tools. SBML qual has the potential to promote collaborative work on the development of novel computational approaches, as well as on the specification and the analysis of comprehensive qualitative models of regulatory and signalling networks.
Alexander, P. M.; LeGrande, A. N.; Fischer, E.; Tedesco, M.; Kelley, M.; Schmidt, G. A.; Fettweis, X.
2017-12-01
Towards achieving coupled simulations between the NASA Goddard Institute for Space Studies (GISS) ModelE2 general circulation model (GCM) and ice sheet models (ISMs), improvements have been made to the representation of the ice sheet surface in ModelE2. These include a sub-grid-scale elevation class scheme, a multi-layer snow model, a time-variable surface albedo scheme, and adjustments to parameterization of sublimation/evaporation. These changes improve the spatial resolution and physical representation of the ice sheet surface such that the surface is represented at a level of detail closer to that of Regional Climate Models (RCMs). We assess the impact of these changes on simulated Greenland Ice Sheet (GrIS) surface mass balance (SMB). We also compare ModelE2 simulations in which winds have been nudged to match the European Center for Medium-Range Weather Forecasts (ECMWF) ERA-Interim reanalysis with simulations from the Modèle Atmosphérique Régionale (MAR) RCM forced by the same reanalysis. Adding surface elevation classes results in a much higher spatial resolution representation of the surface necessary for coupling with ISMs, but has a negligible impact on overall SMB. Implementing a variable surface albedo scheme increases melt by 100%, bringing it closer to melt simulated by MAR. Adjustments made to the representation of topography-influenced surface roughness length in ModelE2 reduce a positive bias in evaporation relative to MAR. We also examine the impact of changes to the GrIS surface on regional atmospheric and oceanic climate in coupled ocean-atmosphere simulations with ModelE2, finding a general warming of the Arctic due to a warmer GrIS, and a cooler North Atlantic in scenarios with doubled atmospheric CO2 relative to pre-industrial levels. The substantial influence of changes to the GrIS surface on the oceans and atmosphere highlight the importance of including these processes in the GCM, in view of potential feedbacks between the ice sheet
Mazoyer, M.; Roehrig, R.; Nuissier, O.; Duffourg, F.; Somot, S.
2017-12-01
Most regional climate models (RCSMs) face difficulties in representing a reasonable pre-cipitation probability density function in the Mediterranean area and especially over land.Small amounts of rain are too frequent, preventing any realistic representation of droughts orheat waves, while the intensity of heavy precipitating events is underestimated and not welllocated by most state-of-the-art RCSMs using parameterized convection (resolution from10 to 50 km). Convective parameterization is a key point for the representation of suchevents and recently, the new physics implemented in the CNRM-RCSM has been shown toremarkably improve it, even at a 50-km scale.The present study seeks to further analyse the representation of heavy precipitating eventsby this new version of CNRM-RCSM using a process oriented approach. We focus on oneparticular event in the south-east of France, over the Cévennes. Two hindcast experimentswith the CNRM-RCSM (12 and 50 km) are performed and compared with a simulationbased on the convection-permitting model Meso-NH, which makes use of a very similarsetup as CNRM-RCSM hindcasts. The role of small-scale features of the regional topogra-phy and its interaction with the impinging large-scale flow in triggering the convective eventare investigated. This study provides guidance in the ongoing implementation and use of aspecific parameterization dedicated to account for subgrid-scale orography in the triggeringand closure conditions of the CNRM-RCSM convection scheme.
Path integral representation of Lorentzian spinfoam model, asymptotics and simplicial geometries
International Nuclear Information System (INIS)
Han, Muxin; Krajewski, Thomas
2014-01-01
A new path integral representation of Lorentzian Engle–Pereira–Rovelli–Livine spinfoam model is derived by employing the theory of unitary representation of SL(2,C). The path integral representation is taken as a starting point of semiclassical analysis. The relation between the spinfoam model and classical simplicial geometry is studied via the large-spin asymptotic expansion of the spinfoam amplitude with all spins uniformly large. More precisely, in the large-spin regime, there is an equivalence between the spinfoam critical configuration (with certain nondegeneracy assumption) and a classical Lorentzian simplicial geometry. Such an equivalence relation allows us to classify the spinfoam critical configurations by their geometrical interpretations, via two types of solution-generating maps. The equivalence between spinfoam critical configuration and simplical geometry also allows us to define the notion of globally oriented and time-oriented spinfoam critical configuration. It is shown that only at the globally oriented and time-oriented spinfoam critical configuration, the leading-order contribution of spinfoam large-spin asymptotics gives precisely an exponential of Lorentzian Regge action of General Relativity. At all other (unphysical) critical configurations, spinfoam large-spin asymptotics modifies the Regge action at the leading-order approximation. (paper)
Zieliński, Tomasz G.
2017-11-01
The paper proposes and investigates computationally-efficient microstructure representations for sound absorbing fibrous media. Three-dimensional volume elements involving non-trivial periodic arrangements of straight fibres are examined as well as simple two-dimensional cells. It has been found that a simple 2D quasi-representative cell can provide similar predictions as a volume element which is in general much more geometrically accurate for typical fibrous materials. The multiscale modelling allowed to determine the effective speeds and damping of acoustic waves propagating in such media, which brings up a discussion on the correlation between the speed, penetration range and attenuation of sound waves. Original experiments on manufactured copper-wire samples are presented and the microstructure-based calculations of acoustic absorption are compared with the corresponding experimental results. In fact, the comparison suggested the microstructure modifications leading to representations with non-uniformly distributed fibres.
Regional Densification of a Global VTEC Model Based on B-Spline Representations
Erdogan, Eren; Schmidt, Michael; Dettmering, Denise; Goss, Andreas; Seitz, Florian; Börger, Klaus; Brandert, Sylvia; Görres, Barbara; Kersten, Wilhelm F.; Bothmer, Volker; Hinrichs, Johannes; Mrotzek, Niclas
2017-04-01
The project OPTIMAP is a joint initiative of the Bundeswehr GeoInformation Centre (BGIC), the German Space Situational Awareness Centre (GSSAC), the German Geodetic Research Institute of the Technical University Munich (DGFI-TUM) and the Institute for Astrophysics at the University of Göttingen (IAG). The main goal of the project is the development of an operational tool for ionospheric mapping and prediction (OPTIMAP). Two key features of the project are the combination of different satellite observation techniques (GNSS, satellite altimetry, radio occultations and DORIS) and the regional densification as a remedy against problems encountered with the inhomogeneous data distribution. Since the data from space-geoscientific mission which can be used for modeling ionospheric parameters, such as the Vertical Total Electron Content (VTEC) or the electron density, are distributed rather unevenly over the globe at different altitudes, appropriate modeling approaches have to be developed to handle this inhomogeneity. Our approach is based on a two-level strategy. To be more specific, in the first level we compute a global VTEC model with a moderate regional and spectral resolution which will be complemented in the second level by a regional model in a densification area. The latter is a region characterized by a dense data distribution to obtain a high spatial and spectral resolution VTEC product. Additionally, the global representation means a background model for the regional one to avoid edge effects at the boundaries of the densification area. The presented approach based on a global and a regional model part, i.e. the consideration of a regional densification is called the Two-Level VTEC Model (TLVM). The global VTEC model part is based on a series expansion in terms of polynomial B-Splines in latitude direction and trigonometric B-Splines in longitude direction. The additional regional model part is set up by a series expansion in terms of polynomial B-splines for
Digital representations of the real world how to capture, model, and render visual reality
Magnor, Marcus A; Sorkine-Hornung, Olga; Theobalt, Christian
2015-01-01
Create Genuine Visual Realism in Computer Graphics Digital Representations of the Real World: How to Capture, Model, and Render Visual Reality explains how to portray visual worlds with a high degree of realism using the latest video acquisition technology, computer graphics methods, and computer vision algorithms. It explores the integration of new capture modalities, reconstruction approaches, and visual perception into the computer graphics pipeline.Understand the Entire Pipeline from Acquisition, Reconstruction, and Modeling to Realistic Rendering and ApplicationsThe book covers sensors fo
An Ontology for Musical Phonographic Records: Contributing with a Representation Model
de Oliveira Albuquerque, Marcelo; Siqueira, Sean Wolfgand M.; de Saldanha da G. Lanzelotte, Rosana; Braz, Maria Helena L. B.
Music is a complex domain with some interesting specificities that makes it difficult to be modeled. If different types of music are considered, then the difficulties are even bigger. This paper presents some of the characteristics that makes music such a hard domain to model and proposes an ontology for representing musical phonographic records. This ontology will provide a global representation that can be used to support systems interoperability and data integration, which provides disseminating music worldwide, contributing to culture in the knowledge society.
DEFF Research Database (Denmark)
Antich, Jose Luis Diez; Paterna, Mattia; Marxer, Richard
2016-01-01
single-linkage clustering, metrical regularity calculation and beat detection. 2) The approx. equal length blocks are clustered into k clusters and the resulting cluster sequence is modelled by transition probabilities between clusters. The Hierarchical Dirichlet Process Hidden Markov Model is employed......A method is proposed that extracts a structural representation of percussive audio in an unsupervised manner. It consists of two parts: 1) The input signal is segmented into blocks of approximately even duration, aligned to a metrical grid, using onset and timbre feature extraction, agglomerative...
Kelleher, C.; McGlynn, B. L.; Wagener, T.
2014-12-01
As the complexity of the problems we seek to address with process-based models continues to increase, our approaches to improving confidence in our predictions must keep pace. Process-based, distributed models have been applied in headwater catchments to address many different objectives, all of which are linked by their reliance on the selection of a catchment-representative parameter set or sets. While these parameter sets are typically obtained through calibration to the streamflow hydrograph, it is widely acknowledged that there is often insufficient information in the hydrograph to effectively address parameter equifinality. Here, we suggest that optimal parameter sets can be obtained with an additional step in the calibration process that considers the spatial representation of internal catchment behavior (e.g. space-time distributions of evapotranspiration, water table depth, presence of overland flow, soil water). Modeled internal catchment behavior is an under-utilized but valuable source of information for separating plausible from unlikely model scenarios. We demonstrate how spatial patterns of hydrologic states and fluxes across annual, seasonal, and event time scales can improve the calibration process and reduce likely parameter sets. Our approach is applied to an extensively monitored headwater catchment in Tenderfoot Creek Experimental Forest in central Montana, simulated using the Distributed Hydrology-Soil-Vegetation Model. Consideration of spatial diagnostics in the calibration process has great potential to ensure a holistic representation of catchment dynamics as well as to increase confidence in conclusions from these types of modeling applications.
Moore, Gaye; Hepworth, Graham; Weiland, Tracey; Manias, Elizabeth; Gerdtz, Marie Frances; Kelaher, Margaret; Dunt, David
2012-02-01
To prospectively evaluate the accuracy of a predictive model to identify homeless people at risk of representation to an emergency department. A prospective cohort analysis utilised one month of data from a Principal Referral Hospital in Melbourne, Australia. All visits involving people classified as homeless were included, excluding those who died. Homelessness was defined as living on the streets, in crisis accommodation, in boarding houses or residing in unstable housing. Rates of re-presentation, defined as the total number of visits to the same emergency department within 28 days of discharge from hospital, were measured. Performance of the risk screening tool was assessed by calculating sensitivity, specificity, positive and negative predictive values and likelihood ratios. Over the study period (April 1, 2009 to April 30, 2009), 3298 presentations from 2888 individuals were recorded. The homeless population accounted for 10% (n=327) of all visits and 7% (n=211) of all patients. A total of 90 (43%) homeless people re-presented to the emergency department. The predictive model included nine variables and achieved 98% (CI, 0.92-0.99) sensitivity and 66% (CI, 0.57-0.74) specificity. The positive predictive value was 68% and the negative predictive value was 98%. The positive likelihood ratio 2.9 (CI, 2.2-3.7) and the negative likelihood ratio was 0.03 (CI, 0.01-0.13). The high emergency department re-presentation rate for people who were homeless identifies unresolved psychosocial health needs. The emergency department remains a vital access point for homeless people, particularly after hours. The risk screening tool is key to identify medical and social aspects of a homeless patient's presentation to assist early identification and referral. Copyright Â© 2012 College of Emergency Nursing Australasia Ltd. Published by Elsevier Ltd. All rights reserved.
Persad, G. G.; Menon, S.; Sednev, I.
2008-12-01
Aerosol indirect effects are known to have a significant impact on the evolution of the climate system. However, their representation via cloud/aerosol microphysics remains a major source of uncertainty in climate models. This study assesses uncertainties in the NASA Goddard Institute for Space Studies (GISS) ModelE global climate model produced by different representations of the cloud/aerosol interaction scheme. By varying the complexity of the cloud microphysics scheme included in the model and analyzing the range of results against cloud properties obtained from satellite retrievals, we evaluate the effect of the different schemes on climate. We examine four sets of simulations with the GISS ModelE: (1) using a new aerosol/cloud microphysics package implemented in ModelE (based on the two-moment cloud microphysics scheme recently implemented in CCSM), (2) using a version of the microphysics scheme previously included in ModelE, (3) using prescribed aerosol concentrations and fixed cloud droplet number (the main link between aerosols and the cloud microphysics scheme), and (4) varying the environment conditions with which the new aerosol/cloud microphysics package is run. The global mean cloud properties are analyzed and compared to global mean ranges as obtained from satellite retrievals. Results show that important climate parameters, such as total cloud cover, can be underestimated by 8-15% using the new aerosol/cloud microphysics scheme. Liquid water path (LWP) is particularly affected by variations to the aerosol/cloud microphysics representation, exhibiting both global mean variations of ~20% and strong regional differences. Significant variability in LWP between the various simulations may be attributed to differences in the autoconversion scheme used in the differing representations of aerosol/cloud interactions. These LWP differences significantly affect radiative parameters, such as cloud optical depth and net cloud forcing (used to evaluate the
Berardi, D.; Gomez-Casanovas, N.; Hudiburg, T. W.
2017-12-01
Improving the certainty of ecosystem models is essential to ensuring their legitimacy, value, and ability to inform management and policy decisions. With more than a century of research exploring the variables controlling soil respiration, a high level of uncertainty remains in the ability of ecosystem models to accurately estimate respiration with changing climatic conditions. Refining model estimates of soil carbon fluxes is a high priority for climate change scientists to determine whether soils will be carbon sources or sinks in the future. We found that DayCent underestimates heterotrophic respiration by several magnitudes for our temperate mixed conifer forest site. While traditional ecosystem models simulate decomposition through first order kinetics, recent research has found that including microbial mechanisms explains 20 percent more spatial heterogeneity. We manipulated the DayCent heterotrophic respiration model to include a more mechanistic representation of microbial dynamic and compared the new model with continuous and survey observations from our experimental forest site in the Northern Rockies ecoregion. We also calibrated the model's sensitivity to soil moisture and temperature to our experimental data. We expect to improve the accuracy of the model by 20-30 percent. By using a more representative and calibrated model of soil carbon dynamics, we can better predict feedbacks between climate and soil carbon pools.
Anderson, Andrew James; Binder, Jeffrey R; Fernandino, Leonardo; Humphries, Colin J; Conant, Lisa L; Aguilar, Mario; Wang, Xixi; Doko, Donias; Raizada, Rajeev D S
2017-09-01
We introduce an approach that predicts neural representations of word meanings contained in sentences then superposes these to predict neural representations of new sentences. A neurobiological semantic model based on sensory, motor, social, emotional, and cognitive attributes was used as a foundation to define semantic content. Previous studies have predominantly predicted neural patterns for isolated words, using models that lack neurobiological interpretation. Fourteen participants read 240 sentences describing everyday situations while undergoing fMRI. To connect sentence-level fMRI activation patterns to the word-level semantic model, we devised methods to decompose the fMRI data into individual words. Activation patterns associated with each attribute in the model were then estimated using multiple-regression. This enabled synthesis of activation patterns for trained and new words, which were subsequently averaged to predict new sentences. Region-of-interest analyses revealed that prediction accuracy was highest using voxels in the left temporal and inferior parietal cortex, although a broad range of regions returned statistically significant results, showing that semantic information is widely distributed across the brain. The results show how a neurobiologically motivated semantic model can decompose sentence-level fMRI data into activation features for component words, which can be recombined to predict activation patterns for new sentences. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.
Representation of the Antarctic circumpolar vortex mixing barrier in a Global Climate Model
Cameron, Chris; Conway, Jono; Bodeker, Greg; Renwick, James
2017-04-01
Dynamical processes that occur in the stratosphere between 15 and 50 km above Earth's surface can affect circulation in the troposphere and have an impact on weather and climate. The Antarctic Circumpolar Vortex (ACV) forms each winter and spring as a zone of strong stratospheric westerly winds surrounding Antarctica. The ACV presents a barrier to transport of air masses between middle and high-latitudes, and contributes to stratospheric temperatures above the polar region dropping sufficiently low in spring to allow for ozone loss. The processes controlling the permeability of the ACV, and how they are likely to respond to a changing climate and a recovering ozone hole, have not been well studied, and as a result are not well simulated in Global Climate Models, particularly in terms of sub-grid scale turbulent diffusion which is parameterized in the models. The UK Met Office Unified Model (UM) is used to examine vortex permeability using both the "New Dynamics" and the upgraded "ENDGame" dynamical cores. Results are compared against reanalysis representations of vortex permeability using the MERRA-2 and ERA-Interim reanalyses data sets, which have been shown to have superior performance in the Southern Hemisphere stratosphere when compared against NCEP-CFSR, and MERRA reanalyses. Results are expected to lead to improved representation of ACV transport process in Global Climate Models and subsequent improvements in climate modelling.
Energy Technology Data Exchange (ETDEWEB)
Bryan, Frank [National Center for Atmospheric Research, Boulder, CO (United States); Dennis, John [National Center for Atmospheric Research, Boulder, CO (United States); MacCready, Parker [Univ. of Washington, Seattle, WA (United States); Whitney, Michael [Univ. of Connecticut
2015-11-20
This project aimed to improve long term global climate simulations by resolving and enhancing the representation of the processes involved in the cycling of freshwater through estuaries and coastal regions. This was a collaborative multi-institution project consisting of physical oceanographers, climate model developers, and computational scientists. It specifically targeted the DOE objectives of advancing simulation and predictive capability of climate models through improvements in resolution and physical process representation. The main computational objectives were: 1. To develop computationally efficient, but physically based, parameterizations of estuary and continental shelf mixing processes for use in an Earth System Model (CESM). 2. To develop a two-way nested regional modeling framework in order to dynamically downscale the climate response of particular coastal ocean regions and to upscale the impact of the regional coastal processes to the global climate in an Earth System Model (CESM). 3. To develop computational infrastructure to enhance the efficiency of data transfer between specific sources and destinations, i.e., a point-to-point communication capability, (used in objective 1) within POP, the ocean component of CESM.
Probabilistic Elastic Part Model: A Pose-Invariant Representation for Real-World Face Verification.
Li, Haoxiang; Hua, Gang
2018-04-01
Pose variation remains to be a major challenge for real-world face recognition. We approach this problem through a probabilistic elastic part model. We extract local descriptors (e.g., LBP or SIFT) from densely sampled multi-scale image patches. By augmenting each descriptor with its location, a Gaussian mixture model (GMM) is trained to capture the spatial-appearance distribution of the face parts of all face images in the training corpus, namely the probabilistic elastic part (PEP) model. Each mixture component of the GMM is confined to be a spherical Gaussian to balance the influence of the appearance and the location terms, which naturally defines a part. Given one or multiple face images of the same subject, the PEP-model builds its PEP representation by sequentially concatenating descriptors identified by each Gaussian component in a maximum likelihood sense. We further propose a joint Bayesian adaptation algorithm to adapt the universally trained GMM to better model the pose variations between the target pair of faces/face tracks, which consistently improves face verification accuracy. Our experiments show that we achieve state-of-the-art face verification accuracy with the proposed representations on the Labeled Face in the Wild (LFW) dataset, the YouTube video face database, and the CMU MultiPIE dataset.
Camporese, M.; Bertoldi, G.; Bortoli, E.; Wohlfahrt, G.
2017-12-01
Integrated hydrologic surface-subsurface models (IHSSMs) are increasingly used as prediction tools to solve simultaneously states and fluxes in and between multiple terrestrial compartments (e.g., snow cover, surface water, groundwater), in an attempt to tackle environmental problems in a holistic approach. Two such models, CATHY and GEOtop, are used in this study to investigate their capabilities to reproduce hydrological processes in alpine grasslands. The two models differ significantly in the complexity of the representation of the surface energy balance and the solution of Richards equation for water flow in the variably saturated subsurface. The main goal of this research is to show how these differences in process representation can lead to different predictions of hydrologic states and fluxes, in the simulation of an experimental site located in the Venosta Valley (South Tyrol, Italy). Here, a large set of relevant hydrological data (e.g., evapotranspiration, soil moisture) has been collected, with ground and remote sensing observations. The area of interest is part of a Long-Term Ecological Research (LTER) site, a mountain steep, heterogeneous slope, where the predominant land use types are meadow, pasture, and forest. The comparison between data and model predictions, as well as between simulations with the two IHSSMs, contributes to advance our understanding of the tradeoffs between different complexities in modeĺs process representation, model accuracy, and the ability to explain observed hydrological dynamics in alpine environments.
Directory of Open Access Journals (Sweden)
Andrej Ficko
2015-03-01
Full Text Available Underuse of nonindustrial private forests in developed countries has been interpreted mostly as a consequence of the prevailing noncommodity objectives of their owners. Recent empirical studies have indicated a correlation between the harvesting behavior of forest owners and the specific conceptualization of appropriate forest management described as "nonintervention" or "hands-off" management. We aimed to fill the huge gap in knowledge of social representations of forest management in Europe and are the first to be so rigorous in eliciting forest owner representations in Europe. We conducted 3099 telephone interviews with randomly selected forest owners in Slovenia, asking them whether they thought they managed their forest efficiently, what the possible reasons for underuse were, and what they understood by forest management. Building on social representations theory and applying a series of structural equation models, we tested the existence of three latent constructs of forest management and estimated whether and how much these constructs correlated to the perception of resource efficiency. Forest owners conceptualized forest management as a mixture of maintenance and ecosystem-centered and economics-centered management. None of the representations had a strong association with the perception of resource efficiency, nor could it be considered a factor preventing forest owners from cutting more. The underuse of wood resources was mostly because of biophysical constraints in the environment and not a deep-seated philosophical objection to harvesting. The difference between our findings and other empirical studies is primarily explained by historical differences in forestland ownership in different parts of Europe and the United States, the rising number of nonresidential owners, alternative lifestyle, and environmental protectionism, but also as a consequence of our high methodological rigor in testing the relationships between the constructs
Model-based Acceleration Control of Turbofan Engines with a Hammerstein-Wiener Representation
Wang, Jiqiang; Ye, Zhifeng; Hu, Zhongzhi; Wu, Xin; Dimirovsky, Georgi; Yue, Hong
2017-05-01
Acceleration control of turbofan engines is conventionally designed through either schedule-based or acceleration-based approach. With the widespread acceptance of model-based design in aviation industry, it becomes necessary to investigate the issues associated with model-based design for acceleration control. In this paper, the challenges for implementing model-based acceleration control are explained; a novel Hammerstein-Wiener representation of engine models is introduced; based on the Hammerstein-Wiener model, a nonlinear generalized minimum variance type of optimal control law is derived; the feature of the proposed approach is that it does not require the inversion operation that usually upsets those nonlinear control techniques. The effectiveness of the proposed control design method is validated through a detailed numerical study.
Vanuytrecht, Eline; Thorburn, Peter J
2017-05-01
Elevated atmospheric CO 2 concentrations ([CO 2 ]) cause direct changes in crop physiological processes (e.g. photosynthesis and stomatal conductance). To represent these CO 2 responses, commonly used crop simulation models have been amended, using simple and semicomplex representations of the processes involved. Yet, there is no standard approach to and often poor documentation of these developments. This study used a bottom-up approach (starting with the APSIM framework as case study) to evaluate modelled responses in a consortium of commonly used crop models and illuminate whether variation in responses reflects true uncertainty in our understanding compared to arbitrary choices of model developers. Diversity in simulated CO 2 responses and limited validation were common among models, both within the APSIM framework and more generally. Whereas production responses show some consistency up to moderately high [CO 2 ] (around 700 ppm), transpiration and stomatal responses vary more widely in nature and magnitude (e.g. a decrease in stomatal conductance varying between 35% and 90% among models was found for [CO 2 ] doubling to 700 ppm). Most notably, nitrogen responses were found to be included in few crop models despite being commonly observed and critical for the simulation of photosynthetic acclimation, crop nutritional quality and carbon allocation. We suggest harmonization and consideration of more mechanistic concepts in particular subroutines, for example, for the simulation of N dynamics, as a way to improve our predictive understanding of CO 2 responses and capture secondary processes. Intercomparison studies could assist in this aim, provided that they go beyond simple output comparison and explicitly identify the representations and assumptions that are causal for intermodel differences. Additionally, validation and proper documentation of the representation of CO 2 responses within models should be prioritized. © 2017 John Wiley & Sons Ltd.
Directory of Open Access Journals (Sweden)
Jelena Jovanović
2010-03-01
Full Text Available The research is oriented on improvement of environmental management system (EMS using BSC (Balanced Scorecard model that presents strategic model of measurem ents and improvement of organisational performance. The research will present approach of objectives and environmental management me trics involvement (proposed by literature review in conventional BSC in "Ad Barska plovi dba" organisation. Further we will test creation of ECO-BSC model based on business activities of non-profit organisations in order to improve envir onmental management system in parallel with other systems of management. Using this approach we may obtain 4 models of BSC that includ es elements of environmen tal management system for AD "Barska plovidba". Taking into acc ount that implementation and evaluation need long period of time in AD "Barska plovidba", the final choice will be based on 14598 (Information technology - Software product evaluation and ISO 9126 (Software engineering - Product quality using AHP method. Those standards are usually used for evaluation of quality software product and computer programs that serve in organisation as support and factors for development. So, AHP model will be bas ed on evolution criteria based on suggestion of ISO 9126 standards and types of evaluation from two evaluation teams. Members of team & will be experts in BSC and environmental management system that are not em ployed in AD "Barska Plovidba" organisation. The members of team 2 will be managers of AD "Barska Plovidba" organisation (including manage rs from environmental department. Merging results based on previously cr eated two AHP models, one can obtain the most appropriate BSC that includes elements of environmental management system. The chosen model will present at the same time suggestion for approach choice including ecological metrics in conventional BSC model for firm that has at least one ECO strategic orientation.
Model's sparse representation based on reduced mixed GMsFE basis methods
Energy Technology Data Exchange (ETDEWEB)
Jiang, Lijian, E-mail: ljjiang@hnu.edu.cn [Institute of Mathematics, Hunan University, Changsha 410082 (China); Li, Qiuqi, E-mail: qiuqili@hnu.edu.cn [College of Mathematics and Econometrics, Hunan University, Changsha 410082 (China)
2017-06-01
In this paper, we propose a model's sparse representation based on reduced mixed generalized multiscale finite element (GMsFE) basis methods for elliptic PDEs with random inputs. A typical application for the elliptic PDEs is the flow in heterogeneous random porous media. Mixed generalized multiscale finite element method (GMsFEM) is one of the accurate and efficient approaches to solve the flow problem in a coarse grid and obtain the velocity with local mass conservation. When the inputs of the PDEs are parameterized by the random variables, the GMsFE basis functions usually depend on the random parameters. This leads to a large number degree of freedoms for the mixed GMsFEM and substantially impacts on the computation efficiency. In order to overcome the difficulty, we develop reduced mixed GMsFE basis methods such that the multiscale basis functions are independent of the random parameters and span a low-dimensional space. To this end, a greedy algorithm is used to find a set of optimal samples from a training set scattered in the parameter space. Reduced mixed GMsFE basis functions are constructed based on the optimal samples using two optimal sampling strategies: basis-oriented cross-validation and proper orthogonal decomposition. Although the dimension of the space spanned by the reduced mixed GMsFE basis functions is much smaller than the dimension of the original full order model, the online computation still depends on the number of coarse degree of freedoms. To significantly improve the online computation, we integrate the reduced mixed GMsFE basis methods with sparse tensor approximation and obtain a sparse representation for the model's outputs. The sparse representation is very efficient for evaluating the model's outputs for many instances of parameters. To illustrate the efficacy of the proposed methods, we present a few numerical examples for elliptic PDEs with multiscale and random inputs. In particular, a two-phase flow model in
Model's sparse representation based on reduced mixed GMsFE basis methods
International Nuclear Information System (INIS)
Jiang, Lijian; Li, Qiuqi
2017-01-01
In this paper, we propose a model's sparse representation based on reduced mixed generalized multiscale finite element (GMsFE) basis methods for elliptic PDEs with random inputs. A typical application for the elliptic PDEs is the flow in heterogeneous random porous media. Mixed generalized multiscale finite element method (GMsFEM) is one of the accurate and efficient approaches to solve the flow problem in a coarse grid and obtain the velocity with local mass conservation. When the inputs of the PDEs are parameterized by the random variables, the GMsFE basis functions usually depend on the random parameters. This leads to a large number degree of freedoms for the mixed GMsFEM and substantially impacts on the computation efficiency. In order to overcome the difficulty, we develop reduced mixed GMsFE basis methods such that the multiscale basis functions are independent of the random parameters and span a low-dimensional space. To this end, a greedy algorithm is used to find a set of optimal samples from a training set scattered in the parameter space. Reduced mixed GMsFE basis functions are constructed based on the optimal samples using two optimal sampling strategies: basis-oriented cross-validation and proper orthogonal decomposition. Although the dimension of the space spanned by the reduced mixed GMsFE basis functions is much smaller than the dimension of the original full order model, the online computation still depends on the number of coarse degree of freedoms. To significantly improve the online computation, we integrate the reduced mixed GMsFE basis methods with sparse tensor approximation and obtain a sparse representation for the model's outputs. The sparse representation is very efficient for evaluating the model's outputs for many instances of parameters. To illustrate the efficacy of the proposed methods, we present a few numerical examples for elliptic PDEs with multiscale and random inputs. In particular, a two-phase flow model in
Energy Technology Data Exchange (ETDEWEB)
Johnson, J. D. (Prostat, Mesa, AZ); Oberkampf, William Louis; Helton, Jon Craig (Arizona State University, Tempe, AZ); Storlie, Curtis B. (North Carolina State University, Raleigh, NC)
2006-10-01
Evidence theory provides an alternative to probability theory for the representation of epistemic uncertainty in model predictions that derives from epistemic uncertainty in model inputs, where the descriptor epistemic is used to indicate uncertainty that derives from a lack of knowledge with respect to the appropriate values to use for various inputs to the model. The potential benefit, and hence appeal, of evidence theory is that it allows a less restrictive specification of uncertainty than is possible within the axiomatic structure on which probability theory is based. Unfortunately, the propagation of an evidence theory representation for uncertainty through a model is more computationally demanding than the propagation of a probabilistic representation for uncertainty, with this difficulty constituting a serious obstacle to the use of evidence theory in the representation of uncertainty in predictions obtained from computationally intensive models. This presentation describes and illustrates a sampling-based computational strategy for the representation of epistemic uncertainty in model predictions with evidence theory. Preliminary trials indicate that the presented strategy can be used to propagate uncertainty representations based on evidence theory in analysis situations where naive sampling-based (i.e., unsophisticated Monte Carlo) procedures are impracticable due to computational cost.
Alharbi, Basma Mohammed
2017-02-07
Location-Based Social Networks (LBSNs) capture individuals whereabouts for a large portion of the population. To utilize this data for user (location)-similarity based tasks, one must map the raw data into a low-dimensional uniform feature space. However, due to the nature of LBSNs, many users have sparse and incomplete check-ins. In this work, we propose to overcome this issue by leveraging the network of friends, when learning the new feature space. We first analyze the impact of friends on individuals\\'s mobility, and show that individuals trajectories are correlated with thoseof their friends and friends of friends (2-hop friends) in an online setting. Based on our observation, we propose a mixed-membership model that infers global mobility patterns from users\\' check-ins and their network of friends, without impairing the model\\'s complexity. Our proposed model infers global patterns and learns new representations for both usersand locations simultaneously. We evaluate the inferred patterns and compare the quality of the new user representation against baseline methods on a social link prediction problem.
Directory of Open Access Journals (Sweden)
Eric eHu
2015-09-01
Full Text Available Chemical synapses are comprised of a wide collection of intricate signaling pathways involving complex dynamics. These mechanisms are often reduced to simple spikes or exponential representations in order to enable computer simulations at higher spatial levels of complexity. However, these representations cannot capture important nonlinear dynamics found in synaptic transmission. Here, we propose an input-output (IO synapse model capable of generating complex nonlinear dynamics while maintaining low computational complexity. This IO synapse model is an extension of a detailed mechanistic glutamatergic synapse model capable of capturing the input-output relationships of the mechanistic model using the Volterra functional power series. We demonstrate that the IO synapse model is able to successfully track the nonlinear dynamics of the synapse up to the third order with high accuracy. We also evaluate the accuracy of the IO synapse model at different input frequencies and compared its performance with that of kinetic models in compartmental neuron models. Our results demonstrate that the IO synapse model is capable of efficiently replicating complex nonlinear dynamics that were represented in the original mechanistic model and provide a method to replicate complex and diverse synaptic transmission within neuron network simulations.
a Conceptual Model for the Representation of Landforms Using Ontology Design Patterns
Guilbert, Eric; Moulin, Bernard; Cortés Murcia, Andrés
2016-06-01
A landform is an area of a terrain with its own recognisable shape. Its definition is often qualitative and inherently vague. Hence landforms are difficult to formalise in view of their extraction from a DTM. This paper presents a two-level framework for the representation of landforms. The objective is to provide a structure where landforms can be conceptually designed according to a common model which can be implemented. It follows the principle that landforms are not defined by geometrical characteristics but by salient features perceived by people. Hence, these salient features define a skeleton around which the landform is built. The first level of our model defines general concepts forming a landform prototype while the second level provides a model for the translation of these concepts and landform extraction on a DTM. The model is still under construction and preliminary results together with current developments are also presented.
A state-space representation of the GR4J rainfall-runoff model
Santos, Léonard; Thirel, Guillaume; Perrin, Charles
2017-04-01
In hydrology, the majority of conceptual models are available only in discrete form. This means that the formulations of the models are based on discrete equations instead of continuous ordinary differential equations (ODE) (see Clark and Kavetski, 2010). The time-step is often "hardcoded" in the model formulation. This can represent a problem in particular for creating a time step-variable model. Furthermore, the fluxes in the models are treated sequentially. For example, in the simple GR4J model, the precipitations (if any) are first added to the production store. Then, the updated level is used to compute the percolation from the store. The resulting level obtained at the end of the time step is different to the level which would be obtained if the two operations (i.e. addition of precipitation and percolation) were done simultaneously. Mathematically, this corresponds to an approximation of ODE solution which is called "operator splitting". This allows to solve an equation even if finding an exact solution is impossible but the error produced by this approximation is difficult to determine. For this reason, it is not easy to separate the numerical error of the resolution from the conceptual error. It could represent an important issue to better understand model behaviour and to identify possible improvements. The aim of this presentation is to detail a state-space representation of the simple GR4J model. The state-space representation aims to represent GR4J by an ODE system which provides the internal variables of the model at all times. We will present here the choices made to adapt GR4J to the state-space formulation and to numerically solve this system. Modifications of the model's equations were also made to adapt the model to lower time step in case it would be used for a time step-variable application. The results obtained with this state-space representation of GR4J were very similar to those of the original model in terms of performances and hydrographs
A Semiotic Model of Destination Representations Applied to Cultural and Heritage Tourism Marketing
DEFF Research Database (Denmark)
Pennington, Jody; Thomsen, Robert Chr.
2010-01-01
; and potential tourists’ comprehension of the sign as interpretants. Three formal analyses of selected photographs used by convention and visitor bureaus (VISIT FLORIDA, Destination Halifax and VisitDenmark) illustrate how the sign-object relationship is always characterized by a combination of iconic, indexical......, and symbolic qualities, each of which destination marketers should consider in choosing representations because of the influence those qualities exert on reception. It is argued that the semiotic model can help marketers make informed decisions about the relevance and probable impact of the iconicity...
The Coulomb gas representation of critical RSOS models on the sphere and the torus
International Nuclear Information System (INIS)
Foda, O.; Nienhuis, B.
1989-01-01
We derive the Coulomb gas formulation of the c<1 discrete unitary series, on the sphere and the torus, starting from the corresponding regime-III RSOS models on a square lattice with appropriate topology. We clarify the origin of the background charge, the screening charges, and the choice of operator representations in a correlation function. In the scaling limit, we obtain a bosonic action coupled to the background curvature in addition to topological terms that vanish on the Riemann sphere. Its Virasoro algebra has the central charge expected on the basis of comparing conformal dimensions. As an application, we derive general expressions for the correlation functions on the torus. (orig.)
The Coulomb gas representation of critical RSOS models on the sphere and the torus
Energy Technology Data Exchange (ETDEWEB)
Foda, O. (Rijksuniversiteit Utrecht (Netherlands). Inst. voor Theoretische Fysica); Nienhuis, B. (Rijksuniversiteit Leiden (Netherlands). Inst. Lorentz voor Theoretische Natuurkunde)
1989-10-02
We derive the Coulomb gas formulation of the c<1 discrete unitary series, on the sphere and the torus, starting from the corresponding regime-III RSOS models on a square lattice with appropriate topology. We clarify the origin of the background charge, the screening charges, and the choice of operator representations in a correlation function. In the scaling limit, we obtain a bosonic action coupled to the background curvature in addition to topological terms that vanish on the Riemann sphere. Its Virasoro algebra has the central charge expected on the basis of comparing conformal dimensions. As an application, we derive general expressions for the correlation functions on the torus. (orig.).
Jolos, R. V.; Kartavenko, V. G.; Kolganova, E. A.
2018-03-01
Nucleon pair correlations in atomic nuclei are analyzed within a nuclear microscopic model with residual isovector pairing forces. These are formulated in the boson representation of fermion operators whereby the collective mode of pair excitations can be isolated without restricting the size of the one-particle basis. This method allows one to analyze the fluctuations in the nonsuperfluid phase of nuclear matter, its phase transition to the superfluid phase, and strong pair correlations. The performance of the method is exemplified by numerical results for the nuclei in the vicinity of the doubly magic 56Ni nucleus.
DEFF Research Database (Denmark)
Thomsen, Martin Christen Frølund; Nielsen, Morten
2012-01-01
valuable information related to amino acid depletion. Seq2logo aims at resolving these issues allowing the user to include sequence weighting to correct for data redundancy, pseudo counts to correct for low number of observations and different logotype representations each capturing different aspects...
Directory of Open Access Journals (Sweden)
Elisângela Cristina Aganette
2017-09-01
Full Text Available The descriptive representation or cataloging is seen as a multidimensional decision process that structures and standardizes the different aspects of an information item, making it unique and subject to recovery and use. This article emphasizes the study of descriptive representation where the main objective is to analyze some conceptual models and their evolution with respect to representation of information. It also presents its features in dealing with current proposals and trends in the twenty-first century, showing the importance of each conceptual model and its possibilities of integration into virtual environments. The aim is to survey and analyze the main conceptual models used by the Library and Information Science. The results allow a broad view about the development of conceptual models and an understanding of descriptive representation in the current context of network technologies, which presents agile, simple and constantly updatable. Other contributions can be identified, such as improving the understanding of descriptive representation area, their relationships and models and provide subsidies to assist the information scientist in the representation of reality
Structure-reactivity modeling using mixture-based representation of chemical reactions.
Polishchuk, Pavel; Madzhidov, Timur; Gimadiev, Timur; Bodrov, Andrey; Nugmanov, Ramil; Varnek, Alexandre
2017-09-01
We describe a novel approach of reaction representation as a combination of two mixtures: a mixture of reactants and a mixture of products. In turn, each mixture can be encoded using an earlier reported approach involving simplex descriptors (SiRMS). The feature vector representing these two mixtures results from either concatenated product and reactant descriptors or the difference between descriptors of products and reactants. This reaction representation doesn't need an explicit labeling of a reaction center. The rigorous "product-out" cross-validation (CV) strategy has been suggested. Unlike the naïve "reaction-out" CV approach based on a random selection of items, the proposed one provides with more realistic estimation of prediction accuracy for reactions resulting in novel products. The new methodology has been applied to model rate constants of E2 reactions. It has been demonstrated that the use of the fragment control domain applicability approach significantly increases prediction accuracy of the models. The models obtained with new "mixture" approach performed better than those required either explicit (Condensed Graph of Reaction) or implicit (reaction fingerprints) reaction center labeling.
An iterative representer-based scheme for data inversion in reservoir modeling
International Nuclear Information System (INIS)
Iglesias, Marco A; Dawson, Clint
2009-01-01
In this paper, we develop a mathematical framework for data inversion in reservoir models. A general formulation is presented for the identification of uncertain parameters in an abstract reservoir model described by a set of nonlinear equations. Given a finite number of measurements of the state and prior knowledge of the uncertain parameters, an iterative representer-based scheme (IRBS) is proposed to find improved parameters. In this approach, the representer method is used to solve a linear data assimilation problem at each iteration of the algorithm. We apply the theory of iterative regularization to establish conditions for which the IRBS will converge to a stable approximation of a solution to the parameter identification problem. These theoretical results are applied to the identification of the second-order coefficient of a forward model described by a parabolic boundary value problem. Numerical results are presented to show the capabilities of the IRBS for the reconstruction of hydraulic conductivity from the steady-state of groundwater flow, as well as the absolute permeability in the single-phase Darcy flow through porous media
Subject-based discriminative sparse representation model for detection of concealed information.
Akhavan, Amir; Moradi, Mohammad Hassan; Vand, Safa Rafiei
2017-05-01
The use of machine learning approaches in concealed information test (CIT) plays a key role in the progress of this neurophysiological field. In this paper, we presented a new machine learning method for CIT in which each subject is considered independent of the others. The main goal of this study is to adapt the discriminative sparse models to be applicable for subject-based concealed information test. In order to provide sufficient discriminability between guilty and innocent subjects, we introduced a novel discriminative sparse representation model and its appropriate learning methods. For evaluation of the method forty-four subjects participated in a mock crime scenario and their EEG data were recorded. As the model input, in this study the recurrence plot features were extracted from single trial data of different stimuli. Then the extracted feature vectors were reduced using statistical dependency method. The reduced feature vector went through the proposed subject-based sparse model in which the discrimination power of sparse code and reconstruction error were applied simultaneously. Experimental results showed that the proposed approach achieved better performance than other competing discriminative sparse models. The classification accuracy, sensitivity and specificity of the presented sparsity-based method were about 93%, 91% and 95% respectively. Using the EEG data of a single subject in response to different stimuli types and with the aid of the proposed discriminative sparse representation model, one can distinguish guilty subjects from innocent ones. Indeed, this property eliminates the necessity of several subject EEG data in model learning and decision making for a specific subject. Copyright © 2017 Elsevier B.V. All rights reserved.
Hongyang, Yu; Zhengang, Lu; Xi, Yang
2017-05-01
Modular Multilevel Converter is more and more widely used in high voltage DC transmission system and high power motor drive system. It is a major topological structure for high power AC-DC converter. Due to the large module number, the complex control algorithm, and the high power user’s back ground, the MMC model used for simulation should be as accurate as possible to simulate the details of how MMC works for the dynamic testing of the MMC controller. But so far, there is no sample simulation MMC model which can simulate the switching dynamic process. In this paper, one curve embedded full-bridge MMC modeling method with detailed representation of IGBT characteristics is proposed. This method is based on the switching curve referring and sample circuit calculation, and it is sample for implementation. Based on the simulation comparison test under Matlab/Simulink, the proposed method is proved to be correct.
A discrete Model of TransMilenio Station Occupation: Representation and algorithms
Directory of Open Access Journals (Sweden)
Sergio A. Rojas-Galeano
2014-08-01
Full Text Available The current demand of Bogota’s BRT system (TransMilenio is causing critical overcrowding throughout the system, particularly in bus stations. The behaviour of individual passengers in such stations is simplistic, yet the resulting crowd dynamics are complex, as the majority of regular users of the system may attest. Discrete models such as cellular automata have proved helpful in simulating simplistic-local vs. complex-global behaviour in similar contexts. Thus, the aim of this study is to characterise a cellular automata model of a TransMilenio station that may serve as a tool to help us better understanding these dynamics, and also as a test-bed for the proposal of mitigation strategies. The paper describes representations and algorithmic aspects of the model and presents preliminary simulations that demonstrate the feasibility of the discussed considerations.
Extraction and representation of common feature from uncertain facial expressions with cloud model.
Wang, Shuliang; Chi, Hehua; Yuan, Hanning; Geng, Jing
2017-12-01
Human facial expressions are key ingredient to convert an individual's innate emotion in communication. However, the variation of facial expressions affects the reliable identification of human emotions. In this paper, we present a cloud model to extract facial features for representing human emotion. First, the uncertainties in facial expression are analyzed in the context of cloud model. The feature extraction and representation algorithm is established under cloud generators. With forward cloud generator, facial expression images can be re-generated as many as we like for visually representing the extracted three features, and each feature shows different roles. The effectiveness of the computing model is tested on Japanese Female Facial Expression database. Three common features are extracted from seven facial expression images. Finally, the paper is concluded and remarked.
The Schroedinger representation for φ4 theory and the O(N) σ-model
International Nuclear Information System (INIS)
Pachos, J.
1996-01-01
In this work we apply the field theoretical Schrodinger representation to the massive φ 4 theory and the O(N) σ model in 1+1 dimensions. The Schrodinger equation for the φ 4 theory is reviewed and then solved classically and semiclassically to obtain the vacuum functional as an expansion of local functionals. These results are compared with equivalent ones derived from the path integral formulation to prove their agreement with the conventional field theoretical methods. For the O(N)σ model we construct the functional Laplacian, which is the principal ingredient of the corresponding Schrodinger equation. This result is used to construct the generalised Virasoro operators for this model and study their algebra. (Author)
Toward a Unified Representation of Atmospheric Convection in Variable-Resolution Climate Models
Energy Technology Data Exchange (ETDEWEB)
Walko, Robert [Univ. of Miami, Coral Gables, FL (United States)
2016-11-07
The purpose of this project was to improve the representation of convection in atmospheric weather and climate models that employ computational grids with spatially-variable resolution. Specifically, our work targeted models whose grids are fine enough over selected regions that convection is resolved explicitly, while over other regions the grid is coarser and convection is represented as a subgrid-scale process. The working criterion for a successful scheme for representing convection over this range of grid resolution was that identical convective environments must produce very similar convective responses (i.e., the same precipitation amount, rate, and timing, and the same modification of the atmospheric profile) regardless of grid scale. The need for such a convective scheme has increased in recent years as more global weather and climate models have adopted variable resolution meshes that are often extended into the range of resolving convection in selected locations.
Modeling and representation of a computer-aided conceptual design system
International Nuclear Information System (INIS)
Li, Bing; Zhang, Ju Fan; Chen, Yuan; Hu, Ying
2012-01-01
A novel hierarchical function action behavior mechanism (FABM) modeling framework is proposed to conduct intelligent mapping from the overall function to the principle solution, according to the requirements of customers. Based on the hierarchical modeling framework, an object oriented representation method is developed to express the inheritance and the interconnecting characteristics between any two objects. In addition, the rules of expansion and modification in demand behavior are proposed to solve the combinational explosion problem, and the combinational rules in the mechanism behavior are developed to extend the innovation of the principle solution. A case study on the pan mechanism design for a cooking robot is presented to demonstrate the implementation of intelligent reasoning based on the FABM model
Srinivasan, H
1984-09-01
Graphic representations of the spectrum concept of leprosy are examined in some detail as models for this disease. This reveals that this concept is somewhat inadequate and that the spectrum metaphor may itself be inappropriate because, by its very linearity of logic, it may not be able to depict the nonlinear behavior of leprosy properly. The assumptions underlying this concept and their logical consequences, brought out by the graphic representations, include an invariable relation between CMI and BI, identity of one type of leprosy with one specific level of CMI, a fixed sequence of types, and the consequent impossibility of skipping the sequence. However, our experience with leprosy does not bear out these assumptions. Further, development and progress of leprosy from a normal (nonleprous) state cannot be represented in these models. A search for alternative conceptual models therefore appears reasonable and even necessary. The catastrophe theory (a branch of topology in mathematics) describes a number of models for explaining how continuous causes could produce sudden or discontinuous changes. Of the various catastrophe theory models available, the relatively simple "cusp" model appears capable of application to leprosy. This model, as applied here, requires two control factors (identified tentatively as the amount of dead bacilli and the amount of living bacilli or their indicators) and one pattern of behavior, identified as progress towards limited or extensive disease. This model suggests under what conditions leprosy will change from one type to another and whether that will happen gradually or suddenly. It also suggests that for certain values of control factors the disease may manifest in one of two forms of borderline leprosy, and that lesions very similar to start with can progress to quite different states under similar conditions of change. The behavior of leprosy agrees more or less with that suggested by this model. The cusp model thus seems to: a
Energy Technology Data Exchange (ETDEWEB)
Ehleringer, James [Univ. of Utah, Salt Lake City, UT (United States). Dept. of Biology; Randerson, James [Univ. of California, Irvine, CA (United States); Lai, Chun-Ta [San Diego State Univ., CA (United States)
2016-02-16
The objective of the proposed research was to collect data and develop models to improve our understanding of the role of drought and fire impacts on the terrestrial carbon cycle in the western US, including impacts associated with urban systems as they impacted regional carbon cycles. Using data we collected and a synthesis of other measurements, we developed new ways (a) to evaluate the representation of drought stress and fire emissions in the Community Land Model, (b) to model net ecosystem exchange combining ground level atmospheric observations with boundary layer theory, (c) to model upstream impacts of fire and fossil fuel emissions on atmospheric carbon dioxide observations, and (d) to model carbon dioxide observations within urban systems and at the urban-wildland interfaces of forest ecosystems.
Liang, Hu; Zhao, Shengrong; Dong, Xiangjun
2017-12-01
Nowadays, sparse representation has been widely used in Magnetic Resonance Imaging (MRI). The commonly used sparse representation methods are based on symmetrical partition, which have not considered the complex structure of MRI image. In this paper, we proposed a sparse representation method for the brain MRI image, called GNAMlet transform, which is based on the gradient information and the non-symmetry and anti-packing model. The proposed sparse representation method can reduce the lost detail information, improving the reconstruction accuracy. The experiment results show the superiority of the proposed transform for the brain MRI image representation in comparison with some state-of-the-art sparse representation methods.
Experience-driven formation of parts-based representations in a model of layered visual memory
Directory of Open Access Journals (Sweden)
Jenia Jitsev
2009-09-01
Full Text Available Growing neuropsychological and neurophysiological evidence suggests that the visual cortex uses parts-based representations to encode, store and retrieve relevant objects. In such a scheme, objects are represented as a set of spatially distributed local features, or parts, arranged in stereotypical fashion. To encode the local appearance and to represent the relations between the constituent parts, there has to be an appropriate memory structure formed by previous experience with visual objects. Here, we propose a model how a hierarchical memory structure supporting efficient storage and rapid recall of parts-based representations can be established by an experience-driven process of self-organization. The process is based on the collaboration of slow bidirectional synaptic plasticity and homeostatic unit activity regulation, both running at the top of fast activity dynamics with winner-take-all character modulated by an oscillatory rhythm. These neural mechanisms lay down the basis for cooperation and competition between the distributed units and their synaptic connections. Choosing human face recognition as a test task, we show that, under the condition of open-ended, unsupervised incremental learning, the system is able to form memory traces for individual faces in a parts-based fashion. On a lower memory layer the synaptic structure is developed to represent local facial features and their interrelations, while the identities of different persons are captured explicitly on a higher layer. An additional property of the resulting representations is the sparseness of both the activity during the recall and the synaptic patterns comprising the memory traces.
Evaluation of Compulsory Military Service in Turkey Using a Population Representation Model
2016-03-01
Representation of Minorities /Subgroups ...................................73 2. Benefits and Burdens of Military Service...Enlistees ......................................................................85 2. Turnover ...representation of minorities /subgroups in the military, the benefits and burdens of military service, women’s representation, and conscientious objection
García, G Cerruela; Palacios-Bejarano, B; Ruiz, I Luque; Gómez-Nieto, M Á
2012-10-01
In this paper we study different representational spaces of molecule data sets based on 2D representation models for the building of QSAR models for the prediction of the activity of 37 benzylamino enaminone derivatives. Approximations based on classical similarity calculated from fingerprint representation of molecules and isomorphism obtained using sub-graph matching algorithms are compared to fragmentation-based approximations using partial least squares and genetic algorithms. The influence of the anchored position of a non-common moiety and the kind of substituents in the common core structure of the data set are analysed, demonstrating the anomalous behaviour of some molecules and therefore the difficulty in building prediction models. These problems are solved by considering approximate similarity models. These models tune the prediction equations based on the size of the substituent and the anchored position, by adjusting the contribution of each substituent in similarity measurements calculated between the molecule data sets.
Pouch, Alison M; Yushkevich, Paul A; Jackson, Benjamin M; Jassar, Arminder S; Vergnat, Mathieu; Gorman, Joseph H; Gorman, Robert C; Sehgal, Chandra M
2012-02-01
Precise 3D modeling of the mitral valve has the potential to improve our understanding of valve morphology, particularly in the setting of mitral regurgitation (MR). Toward this goal, the authors have developed a user-initialized algorithm for reconstructing valve geometry from transesophageal 3D ultrasound (3D US) image data. Semi-automated image analysis was performed on transesophageal 3D US images obtained from 14 subjects with MR ranging from trace to severe. Image analysis of the mitral valve at midsystole had two stages: user-initialized segmentation and 3D deformable modeling with continuous medial representation (cm-rep). Semi-automated segmentation began with user-identification of valve location in 2D projection images generated from 3D US data. The mitral leaflets were then automatically segmented in 3D using the level set method. Second, a bileaflet deformable medial model was fitted to the binary valve segmentation by Bayesian optimization. The resulting cm-rep provided a visual reconstruction of the mitral valve, from which localized measurements of valve morphology were automatically derived. The features extracted from the fitted cm-rep included annular area, annular circumference, annular height, intercommissural width, septolateral length, total tenting volume, and percent anterior tenting volume. These measurements were compared to those obtained by expert manual tracing. Regurgitant orifice area (ROA) measurements were compared to qualitative assessments of MR severity. The accuracy of valve shape representation with cm-rep was evaluated in terms of the Dice overlap between the fitted cm-rep and its target segmentation. The morphological features and anatomic ROA derived from semi-automated image analysis were consistent with manual tracing of 3D US image data and with qualitative assessments of MR severity made on clinical radiology. The fitted cm-reps accurately captured valve shape and demonstrated patient-specific differences in valve
A statistical prediction model based on sparse representations for single image super-resolution.
Peleg, Tomer; Elad, Michael
2014-06-01
We address single image super-resolution using a statistical prediction model based on sparse representations of low- and high-resolution image patches. The suggested model allows us to avoid any invariance assumption, which is a common practice in sparsity-based approaches treating this task. Prediction of high resolution patches is obtained via MMSE estimation and the resulting scheme has the useful interpretation of a feedforward neural network. To further enhance performance, we suggest data clustering and cascading several levels of the basic algorithm. We suggest a training scheme for the resulting network and demonstrate the capabilities of our algorithm, showing its advantages over existing methods based on a low- and high-resolution dictionary pair, in terms of computational complexity, numerical criteria, and visual appearance. The suggested approach offers a desirable compromise between low computational complexity and reconstruction quality, when comparing it with state-of-the-art methods for single image super-resolution.
A self-organizing model of the visual development of hand-centred representations.
Galeazzi, Juan M; Mender, Bedeho M W; Paredes, Mariana; Tromans, James M; Evans, Benjamin D; Minini, Loredana; Stringer, Simon M
2013-01-01
We show how hand-centred visual representations could develop in the primate posterior parietal and premotor cortices during visually guided learning in a self-organizing neural network model. The model incorporates trace learning in the feed-forward synaptic connections between successive neuronal layers. Trace learning encourages neurons to learn to respond to input images that tend to occur close together in time. We assume that sequences of eye movements are performed around individual scenes containing a fixed hand-object configuration. Trace learning will then encourage individual cells to learn to respond to particular hand-object configurations across different retinal locations. The plausibility of this hypothesis is demonstrated in computer simulations.
Representation of the radiative strength functions in the practical model of cascade gamma decay
International Nuclear Information System (INIS)
Vu, D.C.; Sukhovoj, A.M.; Mitsyna, L.V.; Zeinalov, Sh.; Jovancevic, N.; Knezevic, D.; Krmar, M.; Dragic, A.
2016-01-01
The developed in Dubna practical model of the cascade gamma decay of neutron resonance allows one, from the fitted intensities of the two-step cascades, to obtain parameters both of level density and of partial widths of emission of nuclear reaction products. In the presented variant of the model a part of phenomenological representations is minimized. Analysis of new results confirms the previous finding that dynamics of interaction between Fermi- and Bose-nuclear states depends on the form of the nucleus. It also follows from the ratios of densities of vibrational and quasi-particle levels that this interaction exists at least up to the binding neutron energy and probably differs for nuclei with varied parities of nucleons. [ru
Catina, Peter
2009-03-01
It was hypothesized that subjects receiving increased resistance in the squat exercise would demonstrate better technique and better understanding of how to perform the skill than subjects performing the exercise with no increase in resistance. Scores were recorded on the following analyses: the questionnaire analysis, which measured cognitive representation; the video analysis, which measured squat performance technique; and the 3-dimensional figure analysis, which measured the degree of similarity between the position of the model and the position of the subjects during the performance task. Ten undergraduate students were sampled, half of whom received increased resistance in the squat exercise. Admission requirements were that the subjects be men, be matched for age, body weight, and height, and have no experience in resistance training or formal instruction in proper squat technique. After measuring subjects' cognitive representation with the questionnaire, subsequent analyses were conducted to further clarify treatment effects. The second analysis involved measuring differences between the videotaped performance of the model and the videotaped performance of naive subjects. The third analysis consisted of subjects assembling a 3-dimensional wooden figure to duplicate the proper biomechanics of the expert model, which was then photographed and compared with the model's template assembly of the wooden figure. It was concluded that subjects performing the squat with increased resistance showed significant (p technique compared with subjects who performed the squat with no increase in resistance. The directional hypothesis was supported. Namely, the scores of subjects receiving the treatment were predicted to be significantly greater than the scores of those who received no treatment. These data suggest that increasing the resistance in subsequent trials of the squat exercise may be a positive factor in enhancing the performance and improving the biomechanical
On process model representation and AlF{sub 3} dynamics of aluminium electrolysis cells
Energy Technology Data Exchange (ETDEWEB)
Drengstig, Tormod
1997-12-31
This thesis develops a formal graphical based process representation scheme for modelling complex, non-standard unit processes. The scheme is based on topological and phenomenological decompositions. The topological decomposition is the modularization of processes into modules representing volumes and boundaries, whereas the phenomenological decomposition focuses on physical phenomena and characteristics inside these topological modules. This defines legal and illegal connections between components at all levels and facilitates a full implementation of the methodology into a computer aided modelling tool that can interpret graphical symbols and guide modelers towards a consistent mathematical model of the process. The thesis also presents new results on the excess AlF{sub 3} and bath temperature dynamics of an aluminium electrolysis cell. A dynamic model of such a cell is developed and validated against known behaviour and real process data. There are dynamics that the model does not capture and this is further discussed. It is hypothesized that long-term prediction of bath temperature and excess AlF{sub 3} is impossible with a current efficiency model considering only bath composition and temperature. A control strategy for excess AlF{sub 3} and bath temperature is proposed based on an almost constant AlF{sub 3} input close to average consumption and energy manipulations to compensate for the disturbances. 96 refs., 135 figs., 22 tabs.
Lake Representations in Global Climate Models: An End-User Perspective
Rood, R. B.; Briley, L.; Steiner, A.; Wells, K.
2017-12-01
The weather and climate in the Great Lakes region of the United States and Canada are strongly influenced by the lakes. Within global climate models, lakes are incorporated in many ways. If one is interested in quantitative climate information for the Great Lakes, then it is a first principle requirement that end-users of climate model simulation data, whether scientists or practitioners, need to know if and how lakes are incorporated into models. We pose the basic question, how are lakes represented in CMIP models? Despite significant efforts by the climate community to document and publish basic information about climate models, it is unclear how to answer the question about lake representations? With significant knowledge of the practice of the field, then a reasonable starting point is to use the ES-DOC Comparator (https://compare.es-doc.org/ ). Once at this interface to model information, the end-user is faced with the need for more knowledge about the practice and culture of the discipline. For example, lakes are often categorized as a type of land, a counterintuitive concept. In some models, though, lakes are specified in ocean models. There is little evidence and little confidence that the information obtained through this process is complete or accurate. In fact, it is verifiably not accurate. This experience, then, motivates identifying and finding either human experts or technical documentation for each model. The conclusion from this exercise is that it can take months or longer to provide a defensible answer to if and how lakes are represented in climate models. Our experience with lake finding is that this is not a unique experience. This talk documents our experience and explores barriers we have identified and strategies for reducing those barriers.
Al-Balushi, Sulaiman M.; Al-Hajri, Sheikha H.
2014-01-01
The purpose of the current study is to explore the impact of associating animations with concrete models on eleventh-grade students' comprehension of different visual representations in organic chemistry. The study used a post-test control group quasi-experimental design. The experimental group (N = 28) used concrete models, submicroscopic…
SETOR: hardware-lighted three-dimensional solid model representations of macromolecules.
Evans, S V
1993-06-01
SETOR is designed to exploit the hardware lighting capabilities of the IRIS-4D series graphics workstations to render high-quality raster images of macromolecules that can undergo rotation and translation interactively. SETOR can render standard all-atom and backbone models of proteins or nucleic acids, but focuses on displaying protein molecules by highlighting elements of secondary structure. The program has a very friendly user interface that minimizes the number of input files by allowing the user to interactively edit parameters, such as colors, lighting coefficients, and descriptions of secondary structure via mouse activated dialogue boxes. The choice of polymer chain representation can be varied from standard vector models and van der Waal models, to a B-spline fit of polymer backbones that yields a smooth ribbon that approximates the polymer chain, to strict Cardinal splines that interpolate the smoothest curve possible that will precisely follow the polymer chain. The program provides a photograph mode, save/restore facilities, and efficient generation of symmetry-related molecules and packing diagrams. Additionally, SETOR is designed to accept commands and model coordinates from the standard input stream, and to control standard output. Ancillary programs provide a method to interactively edit hardcopy plots of all vector and many solid models generated by SETOR, and to produce standard HPGL or PostScript files. Examples of figures rendered by SETOR of a number of macromolecules of various classes are presented.
Impact of parameter representation in gas-particle partitioning on aerosol yield model prediction
Kelly, Janya L.
A kinetic box model is used to highlight the importance of parameter representation in predicting the formation of secondary organic aerosol (SOA) from the photo-oxidation of toluene through a subset of the University of Leeds Master Chemical Mechanism (MCM) version 3.1, and a kinetically based gas-particle partitioning approach. The model provides a prediction of the total aerosol yield and a tentative speciation of aerosols initialized from experimental data from York University's indoor smog chamber. A series of model sensitivity experiments were performed to study the relative importance of different parameters in SOA formation, with emphasis on vapour pressure, accommodation coefficient and NOx conditions. Early sensitivity experiments indicate vapour pressure to be a critical parameter in the partitioning and final aerosol yield. Current estimation methods are highly sensitive to boiling point temperature and can lead to the propagation of errors in the model. Of concern is the estimation of vapour pressure for compounds containing organic nitrates (major contributors to the aerosol speciation in this study). Results indicate that approximately +/- 80% error can be expected in the final aerosol mass from errors in the boiling point temperature and vapour pressure estimation methods, and, that for most experiments, this error alone cannot account for a general under prediction in the aerosol mass. Current experimental conditions dictate a very high initial NOx environment and a much higher final aerosol yield compared to other smog chamber studies, leading to the question of whether the model results arise from unique experimental conditions (relative to other chambers), from using different pathways in MCMv3.1 leading to different aerosol speciation (from the high NOx conditions), or from the physical representation of partitioning in the model. Results show that the choice of isopropyl nitrite as the hydroxyl radical oxidation source may be contributing to
Directory of Open Access Journals (Sweden)
Su Yang
Full Text Available Spatial-temporal correlations among the data play an important role in traffic flow prediction. Correspondingly, traffic modeling and prediction based on big data analytics emerges due to the city-scale interactions among traffic flows. A new methodology based on sparse representation is proposed to reveal the spatial-temporal dependencies among traffic flows so as to simplify the correlations among traffic data for the prediction task at a given sensor. Three important findings are observed in the experiments: (1 Only traffic flows immediately prior to the present time affect the formation of current traffic flows, which implies the possibility to reduce the traditional high-order predictors into an 1-order model. (2 The spatial context relevant to a given prediction task is more complex than what is assumed to exist locally and can spread out to the whole city. (3 The spatial context varies with the target sensor undergoing prediction and enlarges with the increment of time lag for prediction. Because the scope of human mobility is subject to travel time, identifying the varying spatial context against time lag is crucial for prediction. Since sparse representation can capture the varying spatial context to adapt to the prediction task, it outperforms the traditional methods the inputs of which are confined as the data from a fixed number of nearby sensors. As the spatial-temporal context for any prediction task is fully detected from the traffic data in an automated manner, where no additional information regarding network topology is needed, it has good scalability to be applicable to large-scale networks.
One of Us: Multilevel Models Examining the Impact of Descriptive Representation on Civic Engagement
Norris, Pippa; Krook, Mona Lena
2009-01-01
This paper examines the impact of descriptive representation in comparative perspective. The goals are to establish (1) whether descriptive representation mobilizes attitudinal and behavioral indicators of civic engagement; (2) whether the strength of any such relationship differs for women and young people; and (3) whether this relationship is evident cross-nationally. The first section provides an overview of existing research on descriptive representation and the civic engagement of women ...
Rosolem, R.; Rahman, M.; Kollet, S. J.; Wagener, T.
2017-12-01
Understanding the impacts of land cover and climate changes on terrestrial hydrometeorology is important across a range of spatial and temporal scales. Earth System Models (ESMs) provide a robust platform for evaluating these impacts. However, current ESMs lack the representation of key hydrological processes (e.g., preferential water flow, and direct interactions with aquifers) in general. The typical "free drainage" conceptualization of land models can misrepresent the magnitude of those interactions, consequently affecting the exchange of energy and water at the surface as well as estimates of groundwater recharge. Recent studies show the benefits of explicitly simulating the interactions between subsurface and surface processes in similar models. However, such parameterizations are often computationally demanding resulting in limited application for large/global-scale studies. Here, we take a different approach in developing a novel parameterization for groundwater dynamics. Instead of directly adding another complex process to an established land model, we examine a set of comprehensive experimental scenarios using a very robust and establish three-dimensional hydrological model to develop a simpler parameterization that represents the aquifer to land surface interactions. The main goal of our developed parameterization is to simultaneously maximize the computational gain (i.e., "efficiency") while minimizing simulation errors in comparison to the full 3D model (i.e., "robustness") to allow for easy implementation in ESMs globally. Our study focuses primarily on understanding both the dynamics for groundwater recharge and discharge, respectively. Preliminary results show that our proposed approach significantly reduced the computational demand while model deviations from the full 3D model are considered to be small for these processes.
Representation as the representation of experience
Ankersmit, FR
This essay deals, mainly, with the notion of representation. Representation is associated with texts and, as such, is contrasted to the true singular statement. It is argued that the relationship between the text and what the text represents can never be modeled on the relationship between the true
Static aeroelastic analysis including geometric nonlinearities based on reduced order model
Directory of Open Access Journals (Sweden)
Changchuan Xie
2017-04-01
Full Text Available This paper describes a method proposed for modeling large deflection of aircraft in nonlinear aeroelastic analysis by developing reduced order model (ROM. The method is applied for solving the static aeroelastic and static aeroelastic trim problems of flexible aircraft containing geometric nonlinearities; meanwhile, the non-planar effects of aerodynamics and follower force effect have been considered. ROMs are computational inexpensive mathematical representations compared to traditional nonlinear finite element method (FEM especially in aeroelastic solutions. The approach for structure modeling presented here is on the basis of combined modal/finite element (MFE method that characterizes the stiffness nonlinearities and we apply that structure modeling method as ROM to aeroelastic analysis. Moreover, the non-planar aerodynamic force is computed by the non-planar vortex lattice method (VLM. Structure and aerodynamics can be coupled with the surface spline method. The results show that both of the static aeroelastic analysis and trim analysis of aircraft based on structure ROM can achieve a good agreement compared to analysis based on the FEM and experimental result.
Fock model and Segal-Bargmann transform for minimal representations of Hermitian Lie groups
DEFF Research Database (Denmark)
Hilgert, Joachim; Kobayashi, Toshiyuki; Möllers, Jan
2012-01-01
For any Hermitian Lie group G of tube type we construct a Fock model of its minimal representation. The Fock space is defined on the minimal nilpotent K_C-orbit X in p_C and the L^2-inner product involves a K-Bessel function as density. Here K is a maximal compact subgroup of G, and g......_C=k_C+p_C is a complexified Cartan decomposition. In this realization the space of k-finite vectors consists of holomorphic polynomials on X. The reproducing kernel of the Fock space is calculated explicitly in terms of an I-Bessel function. We further find an explicit formula of a generalized Segal-Bargmann transform which...... intertwines the Schroedinger and Fock model. Its kernel involves the same I-Bessel function. Using the Segal--Bargmann transform we also determine the integral kernel of the unitary inversion operator in the Schroedinger model which is given by a J-Bessel function....
Pairing FLUXNET sites to validate model representations of land-use/land-cover change
Chen, Liang; Dirmeyer, Paul A.; Guo, Zhichang; Schultz, Natalie M.
2018-01-01
Land surface energy and water fluxes play an important role in land-atmosphere interactions, especially for the climatic feedback effects driven by land-use/land-cover change (LULCC). These have long been documented in model-based studies, but the performance of land surface models in representing LULCC-induced responses has not been investigated well. In this study, measurements from proximate paired (open versus forest) flux tower sites are used to represent observed deforestation-induced changes in surface fluxes, which are compared with simulations from the Community Land Model (CLM) and the Noah Multi-Parameterization (Noah-MP) land model. Point-scale simulations suggest the CLM can represent the observed diurnal and seasonal changes in net radiation (Rnet) and ground heat flux (G), but difficulties remain in the energy partitioning between latent (LE) and sensible (H) heat flux. The CLM does not capture the observed decreased daytime LE, and overestimates the increased H during summer. These deficiencies are mainly associated with models' greater biases over forest land-cover types and the parameterization of soil evaporation. Global gridded simulations with the CLM show uncertainties in the estimation of LE and H at the grid level for regional and global simulations. Noah-MP exhibits a similar ability to simulate the surface flux changes, but with larger biases in H, G, and Rnet change during late winter and early spring, which are related to a deficiency in estimating albedo. Differences in meteorological conditions between paired sites is not a factor in these results. Attention needs to be devoted to improving the representation of surface heat flux processes in land models to increase confidence in LULCC simulations.
Kuipers, G.; van der Laan, E.; Arfini, E.A.G.
2017-01-01
This article presents a comparative content analysis of gender representation in fashion magazines in Italy and the Netherlands. Updating Goffman’s classic study of Gender Advertisements, we study the intersections of gender, professional role, country and time in media representation. Thus, we
The Lag Model, a Turbulence Model for Wall Bounded Flows Including Separation
Olsen, Michael E.; Coakley, Thomas J.; Kwak, Dochan (Technical Monitor)
2001-01-01
A new class of turbulence model is described for wall bounded, high Reynolds number flows. A specific turbulence model is demonstrated, with results for favorable and adverse pressure gradient flowfields. Separation predictions are as good or better than either Spalart Almaras or SST models, do not require specification of wall distance, and have similar or reduced computational effort compared with these models.
Luxford, Cynthia J.; Bretz, Stacey Lowery
2014-01-01
Teachers use multiple representations to communicate the concepts of bonding, including Lewis structures, formulas, space-filling models, and 3D manipulatives. As students learn to interpret these multiple representations, they may develop misconceptions that can create problems in further learning of chemistry. Interviews were conducted with 28…
Karvounis, E C; Tsakanikas, V D; Fotiou, E; Fotiadis, D I
2010-01-01
The paper proposes a novel Extensible Markup Language (XML) based format called ART-ML that aims at supporting the interoperability and the reuse of models of blood flow, mass transport and plaque formation, exported by ARTool. ARTool is a platform for the automatic processing of various image modalities of coronary and carotid arteries. The images and their content are fused to develop morphological models of the arteries in easy to handle 3D representations. The platform incorporates efficient algorithms which are able to perform blood flow simulation. In addition atherosclerotic plaque development is estimated taking into account morphological, flow and genetic factors. ART-ML provides a XML format that enables the representation and management of embedded models within the ARTool platform and the storage and interchange of well-defined information. This approach influences in the model creation, model exchange, model reuse and result evaluation.
Thomsen, Martin Christen Frølund; Nielsen, Morten
2012-07-01
Seq2Logo is a web-based sequence logo generator. Sequence logos are a graphical representation of the information content stored in a multiple sequence alignment (MSA) and provide a compact and highly intuitive representation of the position-specific amino acid composition of binding motifs, active sites, etc. in biological sequences. Accurate generation of sequence logos is often compromised by sequence redundancy and low number of observations. Moreover, most methods available for sequence logo generation focus on displaying the position-specific enrichment of amino acids, discarding the equally valuable information related to amino acid depletion. Seq2logo aims at resolving these issues allowing the user to include sequence weighting to correct for data redundancy, pseudo counts to correct for low number of observations and different logotype representations each capturing different aspects related to amino acid enrichment and depletion. Besides allowing input in the format of peptides and MSA, Seq2Logo accepts input as Blast sequence profiles, providing easy access for non-expert end-users to characterize and identify functionally conserved/variable amino acids in any given protein of interest. The output from the server is a sequence logo and a PSSM. Seq2Logo is available at http://www.cbs.dtu.dk/biotools/Seq2Logo (14 May 2012, date last accessed).
BioModels: expanding horizons to include more modelling approaches and formats.
Glont, Mihai; Nguyen, Tung V N; Graesslin, Martin; Hälke, Robert; Ali, Raza; Schramm, Jochen; Wimalaratne, Sarala M; Kothamachu, Varun B; Rodriguez, Nicolas; Swat, Maciej J; Eils, Jurgen; Eils, Roland; Laibe, Camille; Malik-Sheriff, Rahuman S; Chelliah, Vijayalakshmi; Le Novère, Nicolas; Hermjakob, Henning
2018-01-04
BioModels serves as a central repository of mathematical models representing biological processes. It offers a platform to make mathematical models easily shareable across the systems modelling community, thereby supporting model reuse. To facilitate hosting a broader range of model formats derived from diverse modelling approaches and tools, a new infrastructure for BioModels has been developed that is available at http://www.ebi.ac.uk/biomodels. This new system allows submitting and sharing of a wide range of models with improved support for formats other than SBML. It also offers a version-control backed environment in which authors and curators can work collaboratively to curate models. This article summarises the features available in the current system and discusses the potential benefit they offer to the users over the previous system. In summary, the new portal broadens the scope of models accepted in BioModels and supports collaborative model curation which is crucial for model reproducibility and sharing. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.
Flores, Margaret M.; Hinton, Vanessa; Strozier, Shaunita D.
2014-01-01
Based on Common Core Standards (2010), mathematics interventions should emphasize conceptual understanding of numbers and operations as well as fluency. For students at risk for failure, the concrete-representational-abstract (CRA) sequence and the Strategic Instruction Model (SIM) have been shown effective in teaching computation with an emphasis…
A model of adaptive decision-making from representation of information environment by quantum fields
Bagarello, F.; Haven, E.; Khrennikov, A.
2017-10-01
We present the mathematical model of decision-making (DM) of agents acting in a complex and uncertain environment (combining huge variety of economical, financial, behavioural and geopolitical factors). To describe interaction of agents with it, we apply the formalism of quantum field theory (QTF). Quantum fields are a purely informational nature. The QFT model can be treated as a far relative of the expected utility theory, where the role of utility is played by adaptivity to an environment (bath). However, this sort of utility-adaptivity cannot be represented simply as a numerical function. The operator representation in Hilbert space is used and adaptivity is described as in quantum dynamics. We are especially interested in stabilization of solutions for sufficiently large time. The outputs of this stabilization process, probabilities for possible choices, are treated in the framework of classical DM. To connect classical and quantum DM, we appeal to Quantum Bayesianism. We demonstrate the quantum-like interference effect in DM, which is exhibited as a violation of the formula of total probability, and hence the classical Bayesian inference scheme. This article is part of the themed issue `Second quantum revolution: foundational questions'.
Eghtesad, Adnan; Zecevic, Miroslav; Lebensohn, Ricardo A.; McCabe, Rodney J.; Knezevic, Marko
2018-02-01
We present the first successful implementation of a spectral crystal plasticity (SCP) model into a spectral visco-plastic fast Fourier transform (VPFFT) full-field solver. The SCP database allows for non-iterative retrieval of constitutive solutions for a crystal of any orientation subjected to any state of deformation at every voxel representing an FFT point of the overall voxel-based polycrystalline microstructure. Details of this approach are described and validated through example case studies involving a rigid-visco-plastic response and microstructure evolution of polycrystalline copper. It is observed that the novel implementation is able to speed up the overall VPFFT calculations because the conventional Newton-Raphson iterative solution procedure for single crystals in VPFFT is replaced by the more efficient SCP constitutive representation of the solution. As a result, the implementation facilitates efficient simulations of large voxel-based microstructures. Additionally, it provides an incentive for conceiving a multi-level SCP-VPFFT computational scheme. Here, every FFT point of the model is a polycrystal whose response is calculated using a Taylor-type homogenization.
Energy Technology Data Exchange (ETDEWEB)
Klevers, Denis [Theoretical Physics Department, CERN,CH-1211 Geneva 23 (Switzerland); Taylor, Washington [Center for Theoretical Physics, Department of Physics, Massachusetts Institute of Technology,77 Massachusetts Avenue Cambridge, MA 02139 (United States)
2016-06-29
We give an explicit construction of a class of F-theory models with matter in the three-index symmetric (4) representation of SU(2). This matter is realized at codimension two loci in the F-theory base where the divisor carrying the gauge group is singular; the associated Weierstrass model does not have the form associated with a generic SU(2) Tate model. For 6D theories, the matter is localized at a triple point singularity of arithmetic genus g=3 in the curve supporting the SU(2) group. This is the first explicit realization of matter in F-theory in a representation corresponding to a genus contribution greater than one. The construction is realized by “unHiggsing” a model with a U(1) gauge factor under which there is matter with charge q=3. The resulting SU(2) models can be further unHiggsed to realize non-Abelian G{sub 2}×SU(2) models with more conventional matter content or SU(2){sup 3} models with trifundamental matter. The U(1) models used as the basis for this construction do not seem to have a Weierstrass realization in the general form found by Morrison-Park, suggesting that a generalization of that form may be needed to incorporate models with arbitrary matter representations and gauge groups localized on singular divisors.
Neumann, Rebecca B; Cardon, Zoe G; Teshera-Levye, Jennifer; Rockwell, Fulton E; Zwieniecki, Maciej A; Holbrook, N Michele
2014-04-01
The movement of water from moist to dry soil layers through the root systems of plants, referred to as hydraulic redistribution (HR), occurs throughout the world and is thought to influence carbon and water budgets and ecosystem functioning. The realized hydrologic, biogeochemical and ecological consequences of HR depend on the amount of redistributed water, whereas the ability to assess these impacts requires models that correctly capture HR magnitude and timing. Using several soil types and two ecotypes of sunflower (Helianthus annuus L.) in split-pot experiments, we examined how well the widely used HR modelling formulation developed by Ryel et al. matched experimental determination of HR across a range of water potential driving gradients. H. annuus carries out extensive night-time transpiration, and although over the last decade it has become more widely recognized that night-time transpiration occurs in multiple species and many ecosystems, the original Ryel et al. formulation does not include the effect of night-time transpiration on HR. We developed and added a representation of night-time transpiration into the formulation, and only then was the model able to capture the dynamics and magnitude of HR we observed as soils dried and night-time stomatal behaviour changed, both influencing HR. © 2013 John Wiley & Sons Ltd.
Perré, Patrick; Almeida, Giana; Ayouz, Mehdi; Frank, Xavier
2016-01-01
Key message The real tissue structure, including local anisotropy directions, is defined from anatomical images of wood. Using this digital representation, thermal/mass diffusivity and mechanical properties (stiffness, large deformation, rupture) are successfully predicted for any anatomical pattern using suitable meshless methods. Introduction Wood, an engineering material of biological origin, presents a huge variability among and within species. Understanding structure/property ...
Jorgensen, Palle E T
1987-01-01
Historically, operator theory and representation theory both originated with the advent of quantum mechanics. The interplay between the subjects has been and still is active in a variety of areas.This volume focuses on representations of the universal enveloping algebra, covariant representations in general, and infinite-dimensional Lie algebras in particular. It also provides new applications of recent results on integrability of finite-dimensional Lie algebras. As a central theme, it is shown that a number of recent developments in operator algebras may be handled in a particularly e
Yen, Y. N.; Weng, K. H.; Huang, H. Y.
2013-07-01
After over 30 years of practise and development, Taiwan's architectural conservation field is moving rapidly into digitalization and its applications. Compared to modern buildings, traditional Chinese architecture has considerably more complex elements and forms. To document and digitize these unique heritages in their conservation lifecycle is a new and important issue. This article takes the caisson ceiling of the Taipei Confucius Temple, octagonal with 333 elements in 8 types, as a case study for digitization practise. The application of metadata representation and 3D modelling are the two key issues to discuss. Both Revit and SketchUp were appliedin this research to compare its effectiveness to metadata representation. Due to limitation of the Revit database, the final 3D models wasbuilt with SketchUp. The research found that, firstly, cultural heritage databasesmustconvey that while many elements are similar in appearance, they are unique in value; although 3D simulations help the general understanding of architectural heritage, software such as Revit and SketchUp, at this stage, could onlybe used tomodel basic visual representations, and is ineffective indocumenting additional critical data ofindividually unique elements. Secondly, when establishing conservation lifecycle information for application in management systems, a full and detailed presentation of the metadata must also be implemented; the existing applications of BIM in managing conservation lifecycles are still insufficient. Results of the research recommends SketchUp as a tool for present modelling needs, and BIM for sharing data between users, but the implementation of metadata representation is of the utmost importance.
Do convection-permitting models improve the representation of the impact of LUC?
Vanden Broucke, Sam; Van Lipzig, Nicole
2017-10-01
In this study we assess the added value of convection permitting scale (CPS) simulations in studies using regional climate models to quantify the bio-geophysical climate impact of land-use change (LUC). To accomplish this, a comprehensive model evaluation methodology is applied to both non-CPS and CPS simulations. The main characteristics of the evaluation methodology are (1) the use of paired eddy-covariance site observations (forest vs open land) and (2) a simultaneous evaluation of all surface energy budget components. Results show that although generally satisfactory, non-CPS simulations fall short of completely reproducing the observed LUC signal because of three key biases. CPS scale simulations succeed at significantly reducing two of these biases, namely, those in daytime shortwave radiation and daytime sensible heat flux. Also, CPS slightly reduces a third bias in nighttime incoming longwave radiation. The daytime improvements can be attributed partially to the switch from parameterized to explicit convection, the associated improvement in the simulation of afternoon convective clouds, and resulting surface energy budget and atmospheric feedbacks. Also responsible for the improvements during daytime is a better representation of surface heterogeneity and thus, surface roughness. Meanwhile, the modest nighttime longwave improvement can be attributed to increased vertical atmospheric resolution. However, the model still fails at reproducing the magnitude of the observed nighttime longwave difference. One possible explanation for this persistent bias is the nighttime radiative effect of biogenic volatile organic compound emissions over the forest site. A correlation between estimated emission rates and the observed nighttime longwave difference, as well as the persistence of the longwave bias provide support for this hypothesis. However, more research is needed to conclusively determine if the effect indeed exists.
Energy Technology Data Exchange (ETDEWEB)
Hall, Alex [University of California, Los Angeles, CA (United States). Joint Institute for Regional Earth System Science and Engineering
2013-07-24
Stratocumulus and shallow cumulus clouds in subtropical oceanic regions (e.g., Southeast Pacific) cover thousands of square kilometers and play a key role in regulating global climate (e.g., Klein and Hartmann, 1993). Numerical modeling is an essential tool to study these clouds in regional and global systems, but the current generation of climate and weather models has difficulties in representing them in a realistic way (e.g., Siebesma et al., 2004; Stevens et al., 2007; Teixeira et al., 2011). While numerical models resolve the large-scale flow, subgrid-scale parameterizations are needed to estimate small-scale properties (e.g. boundary layer turbulence and convection, clouds, radiation), which have significant influence on the resolved scale due to the complex nonlinear nature of the atmosphere. To represent the contribution of these fine-scale processes to the resolved scale, climate models use various parameterizations, which are the main pieces in the model that contribute to the low clouds dynamics and therefore are the major sources of errors or approximations in their representation. In this project, we aim to 1) improve our understanding of the physical processes in thermal circulation and cloud formation, 2) examine the performance and sensitivity of various parameterizations in the regional weather model (Weather Research and Forecasting model; WRF), and 3) develop, implement, and evaluate the advanced boundary layer parameterization in the regional model to better represent stratocumulus, shallow cumulus, and their transition. Thus, this project includes three major corresponding studies. We find that the mean diurnal cycle is sensitive to model domain in ways that reveal the existence of different contributions originating from the Southeast Pacific land-masses. The experiments suggest that diurnal variations in circulations and thermal structures over this region are influenced by convection over the Peruvian sector of the Andes cordillera, while
Directory of Open Access Journals (Sweden)
Frolov Aleksey
2017-01-01
Full Text Available Creating an innovation environment is shown in the context of interaction of economic agents in the creation and consumption of innovative value-based infrastructure approach. The problem of the complexity of collecting heterogeneous data on the formation and distribution of innovative value in the conditions of the dynamic nature of the research object and the environment is formulated. An information model providing a subject-independent representation of data on innovation value flows is proposed and allows to automate the processes of data collection and analysis with the minimization of time costs. The article was prepared in the course of carrying out research work within the framework of the project part of the state task in the field of scientific activity in accordance with the assignment 26.2758.2017 / 4.6 for 2017-2019. on the topic “System for analyzing the formation and distribution of the value of innovative products based on the infrastructure concept”.
Taşkin, Gülşen
2016-05-01
Recently, information extraction from hyperspectral images (HI) has become an attractive research area for many practical applications in earth observation due to the fact that HI provides valuable information with a huge number of spectral bands. In order to process such a huge amount of data in an effective way, traditional methods may not fully provide a satisfactory performance because they do not mostly consider high dimensionality of the data which causes curse of dimensionality also known as Hughes phenomena. In case of supervised classification, a poor generalization performance is achieved as a consequence resulting in availability of limited training samples. Therefore, advance methods accounting for the high dimensionality need to be developed in order to get a good generalization capability. In this work, a method of High Dimensional Model Representation (HDMR) was utilized for dimensionality reduction, and a novel feature selection method was introduced based on global sensitivity analysis. Several implementations were conducted with hyperspectral images in comparison to state-of-art feature selection algorithms in terms of classification accuracy, and the results showed that the proposed method outperforms the other feature selection methods even with all considered classifiers, that are support vector machines, Bayes, and decision tree j48.
Arevalo, John; Cruz-Roa, Angel; González, Fabio A.
2013-11-01
This paper presents a novel method for basal-cell carcinoma detection, which combines state-of-the-art methods for unsupervised feature learning (UFL) and bag of features (BOF) representation. BOF, which is a form of representation learning, has shown a good performance in automatic histopathology image classi cation. In BOF, patches are usually represented using descriptors such as SIFT and DCT. We propose to use UFL to learn the patch representation itself. This is accomplished by applying a topographic UFL method (T-RICA), which automatically learns visual invariance properties of color, scale and rotation from an image collection. These learned features also reveals these visual properties associated to cancerous and healthy tissues and improves carcinoma detection results by 7% with respect to traditional autoencoders, and 6% with respect to standard DCT representations obtaining in average 92% in terms of F-score and 93% of balanced accuracy.
National Research Council Canada - National Science Library
Ngodock, Hans E; Smith, Scott R; Jacobs, Gregg A
2007-01-01
... (LCE) in the Gulf of Mexico. It was reported that the representer method was more accurate than its ensemble counterparts, yet it had difficulties fitting the data in the last month of the 4-month assimilation window...
On the representation of subsea aquitards in models of offshore fresh groundwater
Solórzano-Rivas, S. C.; Werner, A. D.
2018-02-01
Fresh groundwater is widespread globally in offshore aquifers, and is particularly dependent on the properties of offshore aquitards, which inhibit seawater-freshwater mixing thereby allowing offshore freshwater to persist. However, little is known of the salinity distribution in subsea aquitards, especially in relation to the offshore freshwater distribution. This is critical for the application of recent analytical solutions to subsea freshwater extent given requisite assumptions about aquitard salinity. In this paper, we use numerical simulation to explore the extent of offshore freshwater in simplified situations of subsea aquifers and overlying aquitards, including in relation to the upward leakage of freshwater. The results show that available analytical solutions significantly overestimate the offshore extent of upwelling freshwater due to the presumption of seawater in the aquitard, whereas the seawater wedge toe is less sensitive to the assumed aquitard salinity. We also explore the use of implicit, conductance-based representations of the aquitard (i.e., using the popular SEAWAT code), and find that SEAWAT's implicit approach (i.e., GHB package) can represent the offshore distance of upwelling freshwater using a novel parameterization strategy. The results show that an estimate of the upward freshwater flow that is required to freshen the aquitard is associated with the dimensionless Rayleigh number, whereby the critical Rayleigh number that distinguishes fresh and saline regions (based on the position of the 0.5 isochlor) within the aquitard is approximately 2.
Directory of Open Access Journals (Sweden)
Stefan eHuber
2014-04-01
Full Text Available Decimal fractions comply with the base-10 notational system of natural Arabic numbers. Nevertheless, recent research suggested that decimal fractions may be represented differently than natural numbers because two number processing effects (i.e., semantic interference and compatibility effects differed in their size between decimal fractions and natural numbers. In the present study, we examined whether these differences indeed indicate that decimal fractions are represented differently from natural numbers. Therefore, we provided an alternative explanation for the semantic congruity effect, namely a string length congruity effect. Moreover, we suggest that the smaller compatibility effect for decimal fractions compared to natural numbers was driven by differences in processing strategy (sequential vs. parallel.To evaluate this claim, we manipulated the tenth and hundredth digits in a magnitude comparison task with participants' eye movements recorded, while the unit digits remained identical. In addition, we evaluated whether our empirical findings could be simulated by an extended version of our computational model originally developed to simulate magnitude comparisons of two-digit natural numbers. In the eye-tracking study, we found evidence that participants processed decimal fractions more sequentially than natural numbers because of the identical leading digit. Importantly, our model was able to account for the smaller compatibility effect found for decimal fractions. Moreover, string length congruity was an alternative account for the prolonged reaction times for incongruent decimal pairs. Consequently, we suggest that representations of natural numbers and decimal fractions do not differ.
Todd, Martin; Cavazos, Carolina; Wang, Yi
2013-04-01
The Saharan atmospheric boundary layer (SABL) during summer is one of the deepest on Earth, and is crucial in controlling the vertical redistribution and long-range transport of dust in the Sahara. The SABL is typically made up of an actively growing convective layer driven by high sensible heating at the surface, with a deep, near-neutrally stratified Saharan residual layer (SRL) above it, which is mostly well mixed in humidity and temperature and reaches a height of ˜5-6km. These two layers are usually separated by a weak (≤1K) temperature inversion. Model representation of the SPBL structure and evolution is important for accurate weather/climate and aerosol prediction. In this work, we evaluate model performance of the Weather Research and Forecasting (WRF) to represent key multi-scale processes in the SABL during summer 2011, including depiction of the diurnal cycle. For this purpose, a sensitivity analysis is performed to examine the performance of seven PBL schemes (YSU, MYJ, QNSE, MYNN, ACM, Boulac and MRF) and two land-surface model (Noah and RUC) schemes. In addition, the sensitivity to the choice of lateral boundary conditions (ERA-Interim and NCEP) and land use classification maps (USGS and MODIS-based) is tested. Model outputs were confronted upper-air and surface observations from the Fennec super-site at Bordj Moktar and automatic weather station (AWS) in Southern Algeria Vertical profiles of wind speed, potential temperature and water vapour mixing ratio were examined to diagnose differences in PBL heights and model efficacy to reproduce the diurnal cycle of the SABL. We find that the structure of the model SABL is most sensitive the choice of land surface model and lateral boundary conditions and relatively insensitive to the PBL scheme. Overall the model represents well the diurnal cycle in the structure of the SABL. Consistent model biases include (i) a moist (1-2 gkg-1) and slightly cool (~1K) bias in the daytime convective boundary layer (ii
Gomez, Luis J; Yücel, Abdulkadir C; Hernandez-Garcia, Luis; Taylor, Stephan F; Michielssen, Eric
2015-01-01
A computational framework for uncertainty quantification in transcranial magnetic stimulation (TMS) is presented. The framework leverages high-dimensional model representations (HDMRs), which approximate observables (i.e., quantities of interest such as electric (E) fields induced inside targeted cortical regions) via series of iteratively constructed component functions involving only the most significant random variables (i.e., parameters that characterize the uncertainty in a TMS setup such as the position and orientation of TMS coils, as well as the size, shape, and conductivity of the head tissue). The component functions of HDMR expansions are approximated via a multielement probabilistic collocation (ME-PC) method. While approximating each component function, a quasi-static finite-difference simulator is used to compute observables at integration/collocation points dictated by the ME-PC method. The proposed framework requires far fewer simulations than traditional Monte Carlo methods for providing highly accurate statistical information (e.g., the mean and standard deviation) about the observables. The efficiency and accuracy of the proposed framework are demonstrated via its application to the statistical characterization of E-fields generated by TMS inside cortical regions of an MRI-derived realistic head model. Numerical results show that while uncertainties in tissue conductivities have negligible effects on TMS operation, variations in coil position/orientation and brain size significantly affect the induced E-fields. Our numerical results have several implications for the use of TMS during depression therapy: 1) uncertainty in the coil position and orientation may reduce the response rates of patients; 2) practitioners should favor targets on the crest of a gyrus to obtain maximal stimulation; and 3) an increasing scalp-to-cortex distance reduces the magnitude of E-fields on the surface and inside the cortex.
Bogenschutz, Peter A.
Over the past few years a new type of general circulation model (GCM) has emerged that is known as the multiscale modeling framework (MMF). The Colorado State University (CSU) MMF represents a coupling between the Community Atmosphere Model (CAM) GCM and the System of Atmospheric Modeling (SAM) cloud resolving model (CRM). Within this MMF the embedded CRM replaces the traditionally used parameterized moist physics in CAM to represent subgrid-scale (SGS) convection. However, due to substantial increases of computational burden associated with the MMF, the embedded CRM is typically run with a horizontal grid size of 4 km. With a horizontal grid size of 4 km, a low-order closure CRM cannot adequately represent shallow convective processes, such as trade-wind cumulus or stratocumulus. A computationally inexpensive parameterization of turbulence and clouds is presented in this dissertation. An extensive a priori test is performed to determine which functional form of an assumed PDF is best suited for coarse-grid CRMs for both deep shallow and deep convection. The diagnostic approach to determine the input moments needed for the assumed PDFs uses the subgrid-scale (SGS) turbulent kinetic energy (TKE) as the basis for the parameterization. The term known as the turbulent length scale (L) is examined, as it is needed to parameterize the dissipation of turbulence and therefore is needed to better balance the budgets of SGS TKE. A new formulation of this term is added to the model code which appears to be able to partition resolved and SGS TKE fairly accurately. Results from "offline" tests of the simple diagnostic closure within SAM shows that the cloud and turbulence properties of shallow convection can be adequately represented when compared to large eddy simulation (LES) benchmark simulations. Results are greatly improved when compared to the standard version of SAM. The preliminary test of the scheme within the embedded CRM of the MMF shows promising results with the
4D Floodplain representation in hydrologic flood forecasting using WRFHydro modeling framework
Gangodagamage, C.; Li, Z.; Adams, T.; Ito, T.; Maitaria, K.; Islam, M.; Dhondia, J.
2015-12-01
Floods claim more lives and damage more property than any other category of natural disaster in the Continental U.S. A system that can demarcate local flood boundaries dynamically could help flood prone communities prepare for and even prevent from catastrophic flood events. Lateral distance from the centerline of the river to the right and left floodplains for the water levels coming out of the models at each grid location have not been properly integrated with the national hydrography dataset (NHDPlus). The NHDPlus dataset represents the stream network with feature classes such as rivers, tributaries, canals, lakes, ponds, dams, coastlines, and stream gages. The NHDPlus dataset consists of approximately 2.7 million river reaches defining how surface water drains to the ocean. These river reaches have upstream and downstream nodes and basic parameters such as flow direction, drainage area, reach slope etc. We modified an existing algorithm (Gangodagamage et al., 2007, 2011) to provide lateral distance from the centerline of the river to the right and left floodplains for the flows simulated by models. Previous work produced floodplain boundaries for static river stages (i.e. 3D metric: distance along the main stem, flow depth, lateral distance from river center line). Our new approach introduces the floodplain boundary for variable water levels with the fourth dimension, time. We use modeled flows from WRFHydro and demarcate the right and left lateral boundaries of inundation dynamically. This approach dynamically integrates with high resolution models (e.g., hourly and ~ 1 km spatial resolution) that are developed from recent advancements in high computational power with ground based measurements (e.g., Fluxnet), lateral inundation vectors (direction and spatial extent) derived from multi-temporal remote sensing data (e.g., LiDAR, WorldView 2, Landsat, ASTER, MODIS), and improved representations of the physical processes through multi-parameterizations. Our
Mathematical Model of Thyristor Inverter Including a Series-parallel Resonant Circuit
Directory of Open Access Journals (Sweden)
Miroslaw Luft
2008-01-01
Full Text Available The article presents a mathematical model of thyristor inverter including a series-parallel resonant circuit with theaid of state variable method. Maple procedures are used to compute current and voltage waveforms in the inverter.
Mathematical model of thyristor inverter including a series-parallel resonant circuit
Luft, M.; Szychta, E.
2008-01-01
The article presents a mathematical model of thyristor inverter including a series-parallel resonant circuit with the aid of state variable method. Maple procedures are used to compute current and voltage waveforms in the inverter.
Mathematical Model of Thyristor Inverter Including a Series-parallel Resonant Circuit
Miroslaw Luft; Elzbieta Szychta
2008-01-01
The article presents a mathematical model of thyristor inverter including a series-parallel resonant circuit with theaid of state variable method. Maple procedures are used to compute current and voltage waveforms in the inverter.
National Research Council Canada - National Science Library
Boettner, Daisie
2001-01-01
.... This study develops models for a stand-alone Proton Exchange Membrane (PEM) fuel cell stack, a direct-hydrogen fuel cell system including auxiliaries, and a methanol reforming fuel cell system for integration into a vehicle performance simulator...
DEFF Research Database (Denmark)
Willett, Wesley; Jansen, Yvonne; Dragicevic, Pierre
2017-01-01
We introduce embedded data representations, the use of visual and physical representations of data that are deeply integrated with the physical spaces, objects, and entities to which the data refers. Technologies like lightweight wireless displays, mixed reality hardware, and autonomous vehicles ......-situated, situated, and embedded data displays, including both visualizations and physicalizations. Based on our observations, we identify a variety of design challenges for embedded data representation, and suggest opportunities for future research and applications....
Atmosphere-soil-vegetation model including CO2 exchange processes: SOLVEG2
International Nuclear Information System (INIS)
Nagai, Haruyasu
2004-11-01
A new atmosphere-soil-vegetation model named SOLVEG2 (SOLVEG version 2) was developed to study the heat, water, and CO 2 exchanges between the atmosphere and land-surface. The model consists of one-dimensional multilayer sub-models for the atmosphere, soil, and vegetation. It also includes sophisticated processes for solar and long-wave radiation transmission in vegetation canopy and CO 2 exchanges among the atmosphere, soil, and vegetation. Although the model usually simulates only vertical variation of variables in the surface-layer atmosphere, soil, and vegetation canopy by using meteorological data as top boundary conditions, it can be used by coupling with a three-dimensional atmosphere model. In this paper, details of SOLVEG2, which includes the function of coupling with atmosphere model MM5, are described. (author)
Directory of Open Access Journals (Sweden)
P. Mathiot
2017-07-01
Full Text Available Ice-shelf–ocean interactions are a major source of freshwater on the Antarctic continental shelf and have a strong impact on ocean properties, ocean circulation and sea ice. However, climate models based on the ocean–sea ice model NEMO (Nucleus for European Modelling of the Ocean currently do not include these interactions in any detail. The capability of explicitly simulating the circulation beneath ice shelves is introduced in the non-linear free surface model NEMO. Its implementation into the NEMO framework and its assessment in an idealised and realistic circum-Antarctic configuration is described in this study. Compared with the current prescription of ice shelf melting (i.e. at the surface, inclusion of open sub-ice-shelf cavities leads to a decrease in sea ice thickness along the coast, a weakening of the ocean stratification on the shelf, a decrease in salinity of high-salinity shelf water on the Ross and Weddell sea shelves and an increase in the strength of the gyres that circulate within the over-deepened basins on the West Antarctic continental shelf. Mimicking the overturning circulation under the ice shelves by introducing a prescribed meltwater flux over the depth range of the ice shelf base, rather than at the surface, is also assessed. It yields similar improvements in the simulated ocean properties and circulation over the Antarctic continental shelf to those from the explicit ice shelf cavity representation. With the ice shelf cavities opened, the widely used three equation ice shelf melting formulation, which enables an interactive computation of melting, is tested. Comparison with observational estimates of ice shelf melting indicates realistic results for most ice shelves. However, melting rates for the Amery, Getz and George VI ice shelves are considerably overestimated.
van Lith, PF; Betlem, BHL; Roffel, B
2003-01-01
This paper presents the development of a simple model which describes the product quality and production over time of an experimental batch distillation column, including start-up. The model structure is based on a simple physical framework, which is augmented with fuzzy logic. This provides a way
Enhanced UWB Radio Channel Model for Short-Range Communication Scenarios Including User Dynamics
DEFF Research Database (Denmark)
Kovacs, Istvan Zsolt; Nguyen, Tuan Hung; Eggers, Patrick Claus F.
2005-01-01
channel model represents an enhancement of the existing IEEE 802.15.3a/4a PAN channel model, where antenna and user-proximity effects are not included. Our investigations showed that significant variations of the received wideband power and time-delay signal clustering are possible due the human body...
Analysis of the industrial sector representation in the Fossil2 energy-economic model
International Nuclear Information System (INIS)
Wise, M.A.; Woodruff, M.G.; Ashton, W.B.
1992-08-01
The Fossil2 energy-economic model is used by the US Department of Energy (DOE) for a variety of energy and environmental policy analyses. A number of improvements to the model are under way or are being considered. This report was prepared by the Pacific Northwest Laboratory (PNL) to provide a clearer understanding of the current industrial sector module of Fossil2 and to explore strategies for improving it. The report includes a detailed description of the structure and decision logic of the industrial sector module, along with results from several simulation exercises to demonstrate the behavior of the module in different policy scenarios and under different values of key model parameters. The cases were run with the Fossil2 model at PNL using the National Energy Strategy Actions Case of 1991 as the point of departure. The report also includes a discussion of suggested industrial sector module improvements. These improvements include changes in the way the current model is used; on- and off-line adjustments to some of the model's parameters; and significant changes to include more detail on the industrial processes, technologies, and regions of the country being modeled. The potential benefits and costs of these changes are also discussed
Directory of Open Access Journals (Sweden)
X. Liu
2012-05-01
Full Text Available A modal aerosol module (MAM has been developed for the Community Atmosphere Model version 5 (CAM5, the atmospheric component of the Community Earth System Model version 1 (CESM1. MAM is capable of simulating the aerosol size distribution and both internal and external mixing between aerosol components, treating numerous complicated aerosol processes and aerosol physical, chemical and optical properties in a physically-based manner. Two MAM versions were developed: a more complete version with seven lognormal modes (MAM7, and a version with three lognormal modes (MAM3 for the purpose of long-term (decades to centuries simulations. In this paper a description and evaluation of the aerosol module and its two representations are provided. Sensitivity of the aerosol lifecycle to simplifications in the representation of aerosol is discussed.
Simulated sulfate and secondary organic aerosol (SOA mass concentrations are remarkably similar between MAM3 and MAM7. Differences in primary organic matter (POM and black carbon (BC concentrations between MAM3 and MAM7 are also small (mostly within 10%. The mineral dust global burden differs by 10% and sea salt burden by 30–40% between MAM3 and MAM7, mainly due to the different size ranges for dust and sea salt modes and different standard deviations of the log-normal size distribution for sea salt modes between MAM3 and MAM7. The model is able to qualitatively capture the observed geographical and temporal variations of aerosol mass and number concentrations, size distributions, and aerosol optical properties. However, there are noticeable biases; e.g., simulated BC concentrations are significantly lower than measurements in the Arctic. There is a low bias in modeled aerosol optical depth on the global scale, especially in the developing countries. These biases in aerosol simulations clearly indicate the need for improvements of aerosol processes (e.g., emission fluxes of anthropogenic aerosols and
Including operational data in QMRA model: development and impact of model inputs.
Jaidi, Kenza; Barbeau, Benoit; Carrière, Annie; Desjardins, Raymond; Prévost, Michèle
2009-03-01
A Monte Carlo model, based on the Quantitative Microbial Risk Analysis approach (QMRA), has been developed to assess the relative risks of infection associated with the presence of Cryptosporidium and Giardia in drinking water. The impact of various approaches for modelling the initial parameters of the model on the final risk assessments is evaluated. The Monte Carlo simulations that we performed showed that the occurrence of parasites in raw water was best described by a mixed distribution: log-Normal for concentrations > detection limit (DL), and a uniform distribution for concentrations risks significantly. The mean annual risks for conventional treatment are: 1.97E-03 (removal credit adjusted by log parasite = log spores), 1.58E-05 (log parasite = 1.7 x log spores) or 9.33E-03 (regulatory credits based on the turbidity measurement in filtered water). Using full scale validated SCADA data, the simplified calculation of CT performed at the plant was shown to largely underestimate the risk relative to a more detailed CT calculation, which takes into consideration the downtime and system failure events identified at the plant (1.46E-03 vs. 3.93E-02 for the mean risk).
DEFF Research Database (Denmark)
Andersen, Morten; Vinther, Frank; Ottesen, Johnny T.
2013-01-01
This paper presents a mathematical model of the HPA axis. The HPA axis consists of the hypothalamus, the pituitary and the adrenal glands in which the three hormones CRH, ACTH and cortisol interact through receptor dynamics. Furthermore, it has been suggested that receptors in the hippocampus have...... an influence on the axis.A model is presented with three coupled, non-linear differential equations, with the hormones CRH, ACTH and cortisol as variables. The model includes the known features of the HPA axis, and includes the effects from the hippocampus through its impact on CRH in the hypothalamus...
Representation Elements of Spatial Thinking
Fiantika, F. R.
2017-04-01
This paper aims to add a reference in revealing spatial thinking. There several definitions of spatial thinking but it is not easy to defining it. We can start to discuss the concept, its basic a forming representation. Initially, the five sense catch the natural phenomenon and forward it to memory for processing. Abstraction plays a role in processing information into a concept. There are two types of representation, namely internal representation and external representation. The internal representation is also known as mental representation; this representation is in the human mind. The external representation may include images, auditory and kinesthetic which can be used to describe, explain and communicate the structure, operation, the function of the object as well as relationships. There are two main elements, representations properties and object relationships. These elements play a role in forming a representation.
Directory of Open Access Journals (Sweden)
Ming Li
2012-01-01
Full Text Available Quality function deployment (QFD is a customer-driven approach for product design and development. A QFD analysis process includes a series of subprocesses, such as determination of the importance of customer requirements (CRs, the correlation among engineering characteristics (ECs, and the relationship between CRs and ECs. Usually more than group of one decision makers are involved in the subprocesses to make the decision. In most decision making problems, they often provide their evaluation information in the linguistic form. Moreover, because of different knowledge, background, and discrimination ability, decision makers may express their linguistic preferences in multigranularity linguistic information. Therefore, an effective approach to deal with the multi-granularity linguistic information in QFD analysis process is highly needed. In this study, the QFD methodology is extended with 2-tuple linguistic representation model under multi-granularity linguistic environment. The extended QFD methodology can cope with multi-granularity linguistic evaluation information and avoid the loss of information. The applicability of the proposed approach is demonstrated with a numerical example.
Ryan, Casey M; Williams, Mathew; Grace, John; Woollen, Emily; Lehmann, Caroline E R
2017-01-01
Tree phenology mediates land-atmosphere mass and energy exchange and is a determinant of ecosystem structure and function. In the dry tropics, including African savannas, many trees grow new leaves during the dry season - weeks or months before the rains typically start. This syndrome of pre-rain green-up has long been recognized at small scales, but the high spatial and interspecific variability in leaf phenology has precluded regional generalizations. We used remote sensing data to show that this precocious phenology is ubiquitous across the woodlands and savannas of southern tropical Africa. In 70% of the study area, green-up preceded rain onset by > 20 d (42% > 40 d). All the main vegetation formations exhibited pre-rain green-up, by as much as 53 ± 18 d (in the wet miombo). Green-up showed low interannual variability (SD between years = 11 d), and high spatial variability (> 100 d). These results are consistent with a high degree of local phenological adaptation, and an insolation trigger of green-up. Tree-tree competition and niche separation may explain the ubiquity of this precocious phenology. The ubiquity of pre-rain green-up described here challenges existing model representations and suggests resistance (but not necessarily resilience) to the delay in rain onset predicted under climate change. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.
Representation of Nucleation Mode Microphysics in a Global Aerosol Model with Sectional Microphysics
Lee, Y. H.; Pierce, J. R.; Adams, P. J.
2013-01-01
In models, nucleation mode (1 nmrepresentation of nucleation mode microphysics impacts aerosol number predictions in the TwO-Moment Aerosol Sectional (TOMAS) aerosol microphysics model running with the GISS GCM II-prime by varying its lowest diameter boundary: 1 nm, 3 nm, and 10 nm. The model with the 1 nm boundary simulates the nucleation mode particles with fully resolved microphysical processes, while the model with the 10 nm and 3 nm boundaries uses a nucleation mode dynamics parameterization to account for the growth of nucleated particles to 10 nm and 3 nm, respectively.We also investigate the impact of the time step for aerosol microphysical processes (a 10 min versus a 1 h time step) to aerosol number predictions in the TOMAS models with explicit dynamics for the nucleation mode particles (i.e., 3 nm and 1 nm boundary). The model with the explicit microphysics (i.e., 1 nm boundary) with the 10 min time step is used as a numerical benchmark simulation to estimate biases caused by varying the lower size cutoff and the time step. Different representations of the nucleation mode have a significant effect on the formation rate of particles larger than 10 nm from nucleated particles (J10) and the burdens and lifetimes of ultrafinemode (10 nm=Dp =70 nm) particles but have less impact on the burdens and lifetimes of CCN-sized particles. The models using parameterized microphysics (i.e., 10 nm and 3 nm boundaries) result in higher J10 and shorter coagulation lifetimes of ultrafine-mode particles than the model with explicit dynamics (i.e., 1 nm boundary). The spatial distributions of CN10 (Dp =10 nm) and CCN(0.2 %) (i.e., CCN concentrations at 0.2%supersaturation) are moderately affected, especially CN10 predictions above 700 hPa where nucleation contributes most strongly to CN10 concentrations. The lowermost-layer CN10 is substantially improved with the 3 nm boundary (compared to 10 nm) in most areas. The overprediction in CN10 with the 3 nm and 10 nm boundaries
Ankersmit, F.R.
2010-01-01
This essay focuses on the historical text as a whole. It does so by conceiving of the historical text as representation - in the way the we may say of a photo or a painting that it represents the person depicted on it. It is argued that representation cannot be properly understood by modelling it on
Modification of TOUGH2 to Include the Dusty Gas Model for Gas Diffusion; TOPICAL
International Nuclear Information System (INIS)
WEBB, STEPHEN W.
2001-01-01
The GEO-SEQ Project is investigating methods for geological sequestration of CO(sub 2). This project, which is directed by LBNL and includes a number of other industrial, university, and national laboratory partners, is evaluating computer simulation methods including TOUGH2 for this problem. The TOUGH2 code, which is a widely used code for flow and transport in porous and fractured media, includes simplified methods for gas diffusion based on a direct application of Fick's law. As shown by Webb (1998) and others, the Dusty Gas Model (DGM) is better than Fick's Law for modeling gas-phase diffusion in porous media. In order to improve gas-phase diffusion modeling for the GEO-SEQ Project, the EOS7R module in the TOUGH2 code has been modified to include the Dusty Gas Model as documented in this report. In addition, the liquid diffusion model has been changed from a mass-based formulation to a mole-based model. Modifications for separate and coupled diffusion in the gas and liquid phases have also been completed. The results from the DGM are compared to the Fick's law behavior for TCE and PCE diffusion across a capillary fringe. The differences are small due to the relatively high permeability (k= 10(sup -11) m(sup 2)) of the problem and the small mole fraction of the gases. Additional comparisons for lower permeabilities and higher mole fractions may be useful
Representation of tropical deep convection in atmospheric models – Part 2: Tracer transport
Directory of Open Access Journals (Sweden)
C. R. Hoyle
2011-08-01
Full Text Available The tropical transport processes of 14 different models or model versions were compared, within the framework of the SCOUT-O3 (Stratospheric-Climate Links with Emphasis on the Upper Troposphere and Lower Stratosphere project. The tested models range from the regional to the global scale, and include numerical weather prediction (NWP, chemical transport, and chemistry-climate models. Idealised tracers were used in order to prevent the model's chemistry schemes from influencing the results substantially, so that the effects of modelled transport could be isolated. We find large differences in the vertical transport of very short-lived tracers (with a lifetime of 6 h within the tropical troposphere. Peak convective outflow altitudes range from around 300 hPa to almost 100 hPa among the different models, and the upper tropospheric tracer mixing ratios differ by up to an order of magnitude. The timing of convective events is found to be different between the models, even among those which source their forcing data from the same NWP model (ECMWF. The differences are less pronounced for longer lived tracers, however they could have implications for modelling the halogen burden of the lowermost stratosphere through transport of species such as bromoform, or short-lived hydrocarbons into the lowermost stratosphere. The modelled tracer profiles are strongly influenced by the convective transport parameterisations, and different boundary layer mixing parameterisations also have a large impact on the modelled tracer profiles. Preferential locations for rapid transport from the surface into the upper troposphere are similar in all models, and are mostly concentrated over the western Pacific, the Maritime Continent and the Indian Ocean. In contrast, models do not indicate that upward transport is highest over western Africa.
Numerical Acoustic Models Including Viscous and Thermal losses: Review of Existing and New Methods
DEFF Research Database (Denmark)
Andersen, Peter Risby; Cutanda Henriquez, Vicente; Aage, Niels
2017-01-01
This work presents an updated overview of numerical methods including acoustic viscous and thermal losses. Numerical modelling of viscothermal losses has gradually become more important due to the general trend of making acoustic devices smaller. Not including viscothermal acoustic losses...... in such numerical computations will therefore lead to inaccurate or even wrong results. Both, Finite Element Method (FEM) and Boundary Element Method (BEM), formulations are available that incorporate these loss mechanisms. Including viscothermal losses in FEM computations can be computationally very demanding, due...... and BEM method including viscothermal dissipation are compared and investigated....
International Nuclear Information System (INIS)
Obe, Emeka S.; Binder, A.
2011-01-01
A detailed model in direct-phase variables of a synchronous reluctance motor operating at mains voltage and frequency is presented. The model includes the stator and rotor slot openings, the actual winding layout and the reluctance rotor geometry. Hence, all mmf and permeance harmonics are taken into account. It is seen that non-negligible harmonics introduced by slots are present in the inductances computed by the winding function procedure. These harmonics are usually ignored in d-q models. The machine performance is simulated in the stator reference frame to depict the difference between this new direct-phase model including all harmonics and the conventional rotor reference frame d-q model. Saturation is included by using a polynomial fitting the variation of d-axis inductance with stator current obtained by finite-element software FEMAG DC (registered) . The detailed phase-variable model can yield torque pulsations comparable to those obtained from finite elements while the d-q model cannot.
Directory of Open Access Journals (Sweden)
A. Mahmud
2013-07-01
regions and Malaysian Borneo (Southeast Asia during certain months of the year, and under-predicted in most sites in Asia; relative to those regions, the model performed better for sites in North America. Overall, with the inclusion of additional SOA precursors (MZ4-C2, namely isoprene, MOZART-4 showed consistently better skill (NMB (normalized mean bias of −11 vs. −26% in predicting total OA levels and spatial distributions of SOA as compared with unmodified MOZART-4. Treatment of SOA formation by these known precursors (isoprene, propene and lumped alkenes may be particularly important when MOZART-4 output is used to generate boundary conditions for regional air quality simulations that require more accurate representation of SOA concentrations and distributions.
DEFF Research Database (Denmark)
Mullins, Michael
Contemporary communicational and informational processes contribute to the shaping of our physical environment by having a powerful influence on the process of design. Applications of virtual reality (VR) are transforming the way architecture is conceived and produced by introducing dynamic...... elements into the process of design. Through its immersive properties, virtual reality allows access to a spatial experience of a computer model very different to both screen based simulations as well as traditional forms of architectural representation. The dissertation focuses on processes of the current...... by ‘professionals’ to ‘laypeople’. The thesis articulates problems in VR’s current application, specifically the CAVE and Panorama theatres, and seeks an understanding of how these problems may be addressed. The central questions that have motivated this research project are thus: What is architectural VR...
Towards a Representational Model of Social Affordances from an Institutional Perspective
Sileno, G.; Boer, A.; van Engers, T.
2014-01-01
The paper investigates the connection of the concept of affordance with the concept of institution, fundamental in social sciences and in legal theory, with the purpose of delineating a working definition of social affordance. This hybrid concept enriches the representation tools to be used with
Eighth Grade Students' Representations of Linear Equations Based on a Cups and Tiles Model
Caglayan, Gunhan; Olive, John
2010-01-01
This study examines eighth grade students' use of a representational metaphor (cups and tiles) for writing and solving equations in one unknown. Within this study, we focused on the obstacles and difficulties that students experienced when using this metaphor, with particular emphasis on the operations that can be meaningfully represented through…
Using Representations in Geometry: A Model of Students' Cognitive and Affective Performance
Panaoura, Areti
2014-01-01
Self-efficacy beliefs in mathematics, as a dimension of the affective domain, are related with students' performance on solving tasks and mainly on overcoming cognitive obstacles. The present study investigated the interrelations of cognitive performance on geometry and young students' self-efficacy beliefs about using representations for solving…
Museus, Samuel D.; Jayakumar, Uma M.; Robinson, Thomas
2012-01-01
The failure of many 2-year college students to persist and complete a post-secondary credential or degree remains a problem of paramount importance to higher education policymakers and practitioners. While racial representation--or the extent to which a student's racial group is represented on their respective campus--might be one factor that…
Noncontractible hyperloops in gauge models with Higgs fields in the fundamental representation
Burzlaff, Jürgen
1984-11-01
We study finite-energy configurations in SO( N) gauge theories with Higgs fields in the fundamental representation. For all winding numbers, noncontractible hyperloops are constructed. The corresponding energy density is spherically symmetric, and the configuration with maximal energy on each hyperloop can be determined. Noncontractible hyperloops with an arbitrary winding number for SU(2) gauge theory are also given.
Noncontractible hyperloops in gauge models with Higgs fields in the fundamental representation
Energy Technology Data Exchange (ETDEWEB)
Burzlaff, J. (Dublin Inst. for Advanced Studies (Ireland). School of Theoretical Physics)
1984-11-01
We study finite-energy configurations in SO(N) gauge theories with Higgs fields in the fundamental representation. For all winding numbers, noncontractible hyperloops are constructed. The corresponding energy density is spherically symmetric, and the configuration with maximal energy on each hyperloop can be determined. Noncontractible hyperloops with an arbitrary winding number for SU(2) gauge theory are also given.
Noncontractible hyperloops in gauge models with Higgs fields in the fundamental representation
International Nuclear Information System (INIS)
Burzlaff, J.
1984-01-01
We study finite-energy configurations in SO(N) gauge theories with Higgs fields in the fundamental representation. For all winding numbers, noncontractible hyperloops are constructed. The corresponding energy density is spherically symmetric, and the configuration with maximal energy on each hyperloop can be determined. Noncontractible hyperloops with an arbitrary winding number for SU(2) gauge theory are also given. (orig.)
Modeling of Temperature-Dependent Noise in Silicon Nanowire FETs including Self-Heating Effects
Anandan, P.; Malathi, N.; Mohankumar, N.
2014-01-01
Silicon nanowires are leading the CMOS era towards the downsizing limit and its nature will be effectively suppress the short channel effects. Accurate modeling of thermal noise in nanowires is crucial for RF applications of nano-CMOS emerging technologies. In this work, a perfect temperature-dependent model for silicon nanowires including the self-heating effects has been derived and its effects on device parameters have been observed. The power spectral density as a function of thermal resi...
Klevers, Denis
2016-01-01
We give an explicit construction of a class of F-theory models with matter in the three-index symmetric (4) representation of SU(2). This matter is realized at codimension two loci in the F-theory base where the divisor carrying the gauge group is singular; the associated Weierstrass model does not have the form associated with a generic SU(2) Tate model. For 6D theories, the matter is localized at a triple point singularity of arithmetic genus g=3 in the curve supporting the SU(2) group. This is the first explicit realization of matter in F-theory in a representation corresponding to a genus contribution greater than one. The construction is realized by "unHiggsing" a model with a U(1) gauge factor under which there is matter with charge q=3. The resulting SU(2) models can be further unHiggsed to realize non-Abelian G_2xSU(2) models with more conventional matter content or SU(2)^3 models with trifundamental matter. The U(1) models used as the basis for this construction do not seem to have a Weierstrass real...
Directory of Open Access Journals (Sweden)
Ashley M. Matheny
2017-02-01
Full Text Available Land surface models and dynamic global vegetation models typically represent vegetation through coarse plant functional type groupings based on leaf form, phenology, and bioclimatic limits. Although these groupings were both feasible and functional for early model generations, in light of the pace at which our knowledge of functional ecology, ecosystem demographics, and vegetation-climate feedbacks has advanced and the ever growing demand for enhanced model performance, these groupings have become antiquated and are identified as a key source of model uncertainty. The newest wave of model development is centered on shifting the vegetation paradigm away from plant functional types (PFTs and towards flexible trait-based representations. These models seek to improve errors in ecosystem fluxes that result from information loss due to over-aggregation of dissimilar species into the same functional class. We advocate the importance of the inclusion of plant hydraulic trait representation within the new paradigm through a framework of the whole-plant hydraulic strategy. Plant hydraulic strategy is known to play a critical role in the regulation of stomatal conductance and thus transpiration and latent heat flux. It is typical that coexisting plants employ opposing hydraulic strategies, and therefore have disparate patterns of water acquisition and use. Hydraulic traits are deterministic of drought resilience, response to disturbance, and other demographic processes. The addition of plant hydraulic properties in models may not only improve the simulation of carbon and water fluxes but also vegetation population distributions.
Dipole model analysis of highest precision HERA data, including very low Q2's
International Nuclear Information System (INIS)
Luszczak, A.; Kowalski, H.
2016-12-01
We analyse, within a dipole model, the final, inclusive HERA DIS cross section data in the low χ region, using fully correlated errors. We show, that these highest precision data are very well described within the dipole model framework starting from Q 2 values of 3.5 GeV 2 to the highest values of Q 2 =250 GeV 2 . To analyze the saturation effects we evaluated the data including also the very low 0.35including this region show a preference of the saturation ansatz.
Improving Conceptual Understanding and Representation Skills through Excel-Based Modeling
Malone, Kathy L.; Schunn, Christian D.; Schuchardt, Anita M.
2018-01-01
The National Research Council framework for science education and the Next Generation Science Standards have developed a need for additional research and development of curricula that is both technologically model-based and includes engineering practices. This is especially the case for biology education. This paper describes a quasi-experimental…
Representations of centrally extended Lie superalgebra psl(2|2)
Energy Technology Data Exchange (ETDEWEB)
Matsumoto, Takuya, E-mail: t.matsumoto@uu.nl [Institute for Theoretical Physics and Spinoza Institute, Utrecht University, Leuvenlaan 4, 3854 CE Utrecht (Netherlands); Molev, Alexander, E-mail: alexander.molev@sydney.edu.au [School of Mathematics and Statistics, University of Sydney, NSW 2006 (Australia)
2014-09-15
The symmetries provided by representations of the centrally extended Lie superalgebra psl(2|2) are known to play an important role in the spin chain models originated in the planar anti-de Sitter/conformal field theory correspondence and one-dimensional Hubbard model. We give a complete description of finite-dimensional irreducible representations of this superalgebra thus extending the work of Beisert which deals with a generic family of representations. Our description includes a new class of modules with degenerate eigenvalues of the central elements. Moreover, we construct explicit bases in all irreducible representations by applying the techniques of Mickelsson–Zhelobenko algebras.
The No-Core Gamow Shell Model: Including the continuum in the NCSM
Barrett, B R; Michel, N; Płoszajczak, M
2015-01-01
We are witnessing an era of intense experimental efforts that will provide information about the properties of nuclei far from the line of stability, regarding resonant and scattering states as well as (weakly) bound states. This talk describes our formalism for including these necessary ingredients into the No-Core Shell Model by using the Gamow Shell Model approach. Applications of this new approach, known as the No-Core Gamow Shell Model, both to benchmark cases as well as to unstable nuclei will be given.
The representation of low-level clouds during the West African monsoon in weather and climate models
Kniffka, Anke; Hannak, Lisa; Knippertz, Peter; Fink, Andreas
2016-04-01
The West African monsoon is one of the most important large-scale circulation features in the tropics and the associated seasonal rainfalls are crucial to rain-fed agriculture and water resources for hundreds of millions of people. However, numerical weather and climate models still struggle to realistically represent salient features of the monsoon across a wide range of scales. Recently it has been shown that substantial errors in radiation and clouds exist in the southern parts of West Africa (8°W-8°E, 5-10°N) during summer. This area is characterised by strong low-level jets associated with the formation of extensive ultra-low stratus clouds. Often persisting long after sunrise, these clouds have a substantial impact on the radiation budget at the surface and thus the diurnal evolution of the planetary boundary layer (PBL). Here we present some first results from a detailed analysis of the representation of these clouds and the associated PBL features across a range of weather and climate models. Recent climate model simulations for the period 1991-2010 run in the framework of the Year of Tropical Convection (YOTC) offer a great opportunity for this analysis. The models are those used for the latest Assessment Report of the Intergovernmental Panel on Climate Change, but for YOTC the model output has a much better temporal resolution, allowing to resolve the diurnal cycle, and includes diabatic terms, allowing to much better assess physical reasons for errors in low-level temperature, moisture and thus cloudiness. These more statistical climate model analyses are complemented by experiments using ICON (Icosahedral non-hydrostatic general circulation model), the new numerical weather prediction model of the German Weather Service and the Max Planck Institute for Meteorology. ICON allows testing sensitivities to model resolution and numerical schemes. These model simulations are validated against (re-)analysis data, satellite observations (e.g. CM SAF cloud and
Conceptualizing a Dynamic Fall Risk Model Including Intrinsic Risks and Exposures.
Klenk, Jochen; Becker, Clemens; Palumbo, Pierpaolo; Schwickert, Lars; Rapp, Kilan; Helbostad, Jorunn L; Todd, Chris; Lord, Stephen R; Kerse, Ngaire
2017-11-01
Falls are a major cause of injury and disability in older people, leading to serious health and social consequences including fractures, poor quality of life, loss of independence, and institutionalization. To design and provide adequate prevention measures, accurate understanding and identification of person's individual fall risk is important. However, to date, the performance of fall risk models is weak compared with models estimating, for example, cardiovascular risk. This deficiency may result from 2 factors. First, current models consider risk factors to be stable for each person and not change over time, an assumption that does not reflect real-life experience. Second, current models do not consider the interplay of individual exposure including type of activity (eg, walking, undertaking transfers) and environmental risks (eg, lighting, floor conditions) in which activity is performed. Therefore, we posit a dynamic fall risk model consisting of intrinsic risk factors that vary over time and exposure (activity in context). eHealth sensor technology (eg, smartphones) begins to enable the continuous measurement of both the above factors. We illustrate our model with examples of real-world falls from the FARSEEING database. This dynamic framework for fall risk adds important aspects that may improve understanding of fall mechanisms, fall risk models, and the development of fall prevention interventions. Copyright © 2017 AMDA – The Society for Post-Acute and Long-Term Care Medicine. Published by Elsevier Inc. All rights reserved.
Modeling of cylindrical surrounding gate MOSFETs including the fringing field effects
International Nuclear Information System (INIS)
Gupta, Santosh K.; Baishya, Srimanta
2013-01-01
A physically based analytical model for surface potential and threshold voltage including the fringing gate capacitances in cylindrical surround gate (CSG) MOSFETs has been developed. Based on this a subthreshold drain current model has also been derived. This model first computes the charge induced in the drain/source region due to the fringing capacitances and considers an effective charge distribution in the cylindrically extended source/drain region for the development of a simple and compact model. The fringing gate capacitances taken into account are outer fringe capacitance, inner fringe capacitance, overlap capacitance, and sidewall capacitance. The model has been verified with the data extracted from 3D TCAD simulations of CSG MOSFETs and was found to be working satisfactorily. (semiconductor devices)
International Nuclear Information System (INIS)
Chen, Y W; Zhang, L F; Huang, J P
2007-01-01
By using theoretical analysis and computer simulations, we develop the Watts-Strogatz network model by including degree distribution, in an attempt to improve the comparison between characteristic path lengths and clustering coefficients predicted by the original Watts-Strogatz network model and those of the real networks with the small-world property. Good agreement between the predictions of the theoretical analysis and those of the computer simulations has been shown. It is found that the developed Watts-Strogatz network model can fit the real small-world networks more satisfactorily. Some other interesting results are also reported by adjusting the parameters in a model degree-distribution function. The developed Watts-Strogatz network model is expected to help in the future analysis of various social problems as well as financial markets with the small-world property
Including Effects of Water Stress on Dead Organic Matter Decay to a Forest Carbon Model
Kim, H.; Lee, J.; Han, S. H.; Kim, S.; Son, Y.
2017-12-01
Decay of dead organic matter is a key process of carbon (C) cycling in forest ecosystems. The change in decay rate depends on temperature sensitivity and moisture conditions. The Forest Biomass and Dead organic matter Carbon (FBDC) model includes a decay sub-model considering temperature sensitivity, yet does not consider moisture conditions as drivers of the decay rate change. This study aimed to improve the FBDC model by including a water stress function to the decay sub-model. Also, soil C sequestration under climate change with the FBDC model including the water stress function was simulated. The water stress functions were determined with data from decomposition study on Quercus variabilis forests and Pinus densiflora forests of Korea, and adjustment parameters of the functions were determined for both species. The water stress functions were based on the ratio of precipitation to potential evapotranspiration. Including the water stress function increased the explained variances of the decay rate by 19% for the Q. variabilis forests and 7% for the P. densiflora forests, respectively. The increase of the explained variances resulted from large difference in temperature range and precipitation range across the decomposition study plots. During the period of experiment, the mean annual temperature range was less than 3°C, while the annual precipitation ranged from 720mm to 1466mm. Application of the water stress functions to the FBDC model constrained increasing trend of temperature sensitivity under climate change, and thus increased the model-estimated soil C sequestration (Mg C ha-1) by 6.6 for the Q. variabilis forests and by 3.1 for the P. densiflora forests, respectively. The addition of water stress functions increased reliability of the decay rate estimation and could contribute to reducing the bias in estimating soil C sequestration under varying moisture condition. Acknowledgement: This study was supported by Korea Forest Service (2017044B10-1719-BB01)
Tao, Cui; Jiang, Guoqian; Oniki, Thomas A; Freimuth, Robert R; Zhu, Qian; Sharma, Deepak; Pathak, Jyotishman; Huff, Stanley M; Chute, Christopher G
2013-05-01
The clinical element model (CEM) is an information model designed for representing clinical information in electronic health records (EHR) systems across organizations. The current representation of CEMs does not support formal semantic definitions and therefore it is not possible to perform reasoning and consistency checking on derived models. This paper introduces our efforts to represent the CEM specification using the Web Ontology Language (OWL). The CEM-OWL representation connects the CEM content with the Semantic Web environment, which provides authoring, reasoning, and querying tools. This work may also facilitate the harmonization of the CEMs with domain knowledge represented in terminology models as well as other clinical information models such as the openEHR archetype model. We have created the CEM-OWL meta ontology based on the CEM specification. A convertor has been implemented in Java to automatically translate detailed CEMs from XML to OWL. A panel evaluation has been conducted, and the results show that the OWL modeling can faithfully represent the CEM specification and represent patient data.
Käser, Daniel; Graf, Tobias; Cochand, Fabien; McLaren, Rob; Therrien, René; Brunner, Philip
2014-01-01
Recent models that couple three-dimensional subsurface flow with two-dimensional overland flow are valuable tools for quantifying complex groundwater/stream interactions and for evaluating their influence on watershed processes. For the modeler who is used to defining streams as a boundary condition, the representation of channels in integrated models raises a number of conceptual and technical issues. These models are far more sensitive to channel topography than conventional groundwater models. On all spatial scales, both the topography of a channel and its connection with the floodplain are important. For example, the geometry of river banks influences bank storage and overbank flooding; the slope of the river is a primary control on the behavior of a catchment; and at the finer scale bedform characteristics affect hyporheic exchange. Accurate data on streambed topography, however, are seldom available, and the spatial resolution of digital elevation models is typically too coarse in river environments, resulting in unrealistic or undulating streambeds. Modelers therefore perform some kind of manual yet often cumbersome correction to the available topography. In this context, the paper identifies some common pitfalls, and provides guidance to overcome these. Both aspects of topographic representation and mesh discretization are addressed. Additionally, two tutorials are provided to illustrate: (1) the interpolation of channel cross-sectional data and (2) the refinement of a mesh along a stream in areas of high topographic variability. © 2014, National Ground Water Association.
Including an ocean carbon cycle model into iLOVECLIM (v1.0)
Bouttes, N.; Roche, D.M.V.A.P.; Mariotti, V.; Bopp, L.
2015-01-01
The atmospheric carbon dioxide concentration plays a crucial role in the radiative balance and as such has a strong influence on the evolution of climate. Because of the numerous interactions between climate and the carbon cycle, it is necessary to include a model of the carbon cycle within a
International Nuclear Information System (INIS)
Coolen, F.P.A.
1997-01-01
This paper is intended to make researchers in reliability theory aware of a recently introduced Bayesian model with imprecise prior distributions for statistical inference on failure data, that can also be considered as a robust Bayesian model. The model consists of a multinomial distribution with Dirichlet priors, making the approach basically nonparametric. New results for the model are presented, related to right-censored observations, where estimation based on this model is closely related to the product-limit estimator, which is an important statistical method to deal with reliability or survival data including right-censored observations. As for the product-limit estimator, the model considered in this paper aims at not using any information other than that provided by observed data, but our model fits into the robust Bayesian context which has the advantage that all inferences can be based on probabilities or expectations, or bounds for probabilities or expectations. The model uses a finite partition of the time-axis, and as such it is also related to life-tables
MEMLS3&a: Microwave Emission Model of Layered Snowpacks adapted to include backscattering
Directory of Open Access Journals (Sweden)
M. Proksch
2015-08-01
Full Text Available The Microwave Emission Model of Layered Snowpacks (MEMLS was originally developed for microwave emissions of snowpacks in the frequency range 5–100 GHz. It is based on six-flux theory to describe radiative transfer in snow including absorption, multiple volume scattering, radiation trapping due to internal reflection and a combination of coherent and incoherent superposition of reflections between horizontal layer interfaces. Here we introduce MEMLS3&a, an extension of MEMLS, which includes a backscatter model for active microwave remote sensing of snow. The reflectivity is decomposed into diffuse and specular components. Slight undulations of the snow surface are taken into account. The treatment of like- and cross-polarization is accomplished by an empirical splitting parameter q. MEMLS3&a (as well as MEMLS is set up in a way that snow input parameters can be derived by objective measurement methods which avoid fitting procedures of the scattering efficiency of snow, required by several other models. For the validation of the model we have used a combination of active and passive measurements from the NoSREx (Nordic Snow Radar Experiment campaign in Sodankylä, Finland. We find a reasonable agreement between the measurements and simulations, subject to uncertainties in hitherto unmeasured input parameters of the backscatter model. The model is written in Matlab and the code is publicly available for download through the following website: http://www.iapmw.unibe.ch/research/projects/snowtools/memls.html.
Diehl, S; Zambrano, J; Carlsson, B
2016-01-01
A reduced model of a completely stirred-tank bioreactor coupled to a settling tank with recycle is analyzed in its steady states. In the reactor, the concentrations of one dominant particulate biomass and one soluble substrate component are modelled. While the biomass decay rate is assumed to be constant, growth kinetics can depend on both substrate and biomass concentrations, and optionally model substrate inhibition. Compressive and hindered settling phenomena are included using the Bürger-Diehl settler model, which consists of a partial differential equation. Steady-state solutions of this partial differential equation are obtained from an ordinary differential equation, making steady-state analysis of the entire plant difficult. A key result showing that the ordinary differential equation can be replaced with an approximate algebraic equation simplifies model analysis. This algebraic equation takes the location of the sludge-blanket during normal operation into account, allowing for the limiting flux capacity caused by compressive settling to easily be included in the steady-state mass balance equations for the entire plant system. This novel approach grants the possibility of more realistic solutions than other previously published reduced models, comprised of yet simpler settler assumptions. The steady-state concentrations, solids residence time, and the wastage flow ratio are functions of the recycle ratio. Solutions are shown for various growth kinetics; with different values of biomass decay rate, influent volumetric flow, and substrate concentration. Copyright © 2015 Elsevier Ltd. All rights reserved.
DEFF Research Database (Denmark)
Vafamand, Navid; Asemani, Mohammad Hassan; Khayatiyan, Alireza
2018-01-01
criterion, new robust controller design conditions in terms of linear matrix inequalities are derived. Three practical case studies, electric power steering system, a helicopter model and servo-mechanical system, are presented to demonstrate the importance of such class of nonlinear systems comprising......This paper proposes a novel robust controller design for a class of nonlinear systems including hard nonlinearity functions. The proposed approach is based on Takagi-Sugeno (TS) fuzzy modeling, nonquadratic Lyapunov function, and nonparallel distributed compensation scheme. In this paper, a novel...... TS modeling of the nonlinear dynamics with signum functions is proposed. This model can exactly represent the original nonlinear system with hard nonlinearity while the discontinuous signum functions are not approximated. Based on the bounded-input-bounded-output stability scheme and L₁ performance...
A roller chain drive model including contact with guide-bars
DEFF Research Database (Denmark)
Pedersen, Sine Leergaard; Hansen, John Michael; Ambrósio, J. A. C.
2004-01-01
as continuous force. The model of the roller-chain drive now proposed departs from an earlier model where two contact/impact methods are proposed to describe the contact between the rollers of the chain and the teeth of the sprockets. These different formulations are based on unilateral constraints....... In the continuous force method the roller-sprocket contact, is represented by forces applied on each seated roller and in the respective sprocket teeth. These forces are functions of the pseudo penetrations between roller and sprocket, impacting velocities and a restitution coefficient. In the continuous force......A model of a roller chain drive is developed and applied to the simulation and analysis of roller chain drives of large marine diesel engines. The model includes the impact with guide-bars that are the motion delimiter components on the chain strands between the sprockets. The main components...
Prospects for genetically modified non-human primate models, including the common marmoset.
Sasaki, Erika
2015-04-01
Genetically modified mice have contributed much to studies in the life sciences. In some research fields, however, mouse models are insufficient for analyzing the molecular mechanisms of pathology or as disease models. Often, genetically modified non-human primate (NHP) models are desired, as they are more similar to human physiology, morphology, and anatomy. Recent progress in studies of the reproductive biology in NHPs has enabled the introduction of exogenous genes into NHP genomes or the alteration of endogenous NHP genes. This review summarizes recent progress in the production of genetically modified NHPs, including the common marmoset, and future perspectives for realizing genetically modified NHP models for use in life sciences research. Copyright © 2015 Elsevier Ireland Ltd and the Japan Neuroscience Society. All rights reserved.
Affine histories in quantum gravity: introduction and the representation for a cosmological model
International Nuclear Information System (INIS)
Kessari, Smaragda
2007-01-01
It is shown how consistent histories quantum cosmology can be realized through Isham's histories projection operator consistent histories scheme. This is done by using an affine algebra instead of a canonical one and also by using cocycle representations. A regularization scheme allows us to find a history Hamiltonian which exists as a proper self-adjoint operator. The role of a cocycle choice is also discussed
Improving weather predictability by including land-surface model parameter uncertainty
Orth, Rene; Dutra, Emanuel; Pappenberger, Florian
2016-04-01
The land surface forms an important component of Earth system models and interacts nonlinearly with other parts such as ocean and atmosphere. To capture the complex and heterogenous hydrology of the land surface, land surface models include a large number of parameters impacting the coupling to other components of the Earth system model. Focusing on ECMWF's land-surface model HTESSEL we present in this study a comprehensive parameter sensitivity evaluation using multiple observational datasets in Europe. We select 6 poorly constrained effective parameters (surface runoff effective depth, skin conductivity, minimum stomatal resistance, maximum interception, soil moisture stress function shape, total soil depth) and explore their sensitivity to model outputs such as soil moisture, evapotranspiration and runoff using uncoupled simulations and coupled seasonal forecasts. Additionally we investigate the possibility to construct ensembles from the multiple land surface parameters. In the uncoupled runs we find that minimum stomatal resistance and total soil depth have the most influence on model performance. Forecast skill scores are moreover sensitive to the same parameters as HTESSEL performance in the uncoupled analysis. We demonstrate the robustness of our findings by comparing multiple best performing parameter sets and multiple randomly chosen parameter sets. We find better temperature and precipitation forecast skill with the best-performing parameter perturbations demonstrating representativeness of model performance across uncoupled (and hence less computationally demanding) and coupled settings. Finally, we construct ensemble forecasts from ensemble members derived with different best-performing parameterizations of HTESSEL. This incorporation of parameter uncertainty in the ensemble generation yields an increase in forecast skill, even beyond the skill of the default system. Orth, R., E. Dutra, and F. Pappenberger, 2016: Improving weather predictability by
Global Reference Atmospheric Models, Including Thermospheres, for Mars, Venus and Earth
Justh, Hilary L.; Justus, C. G.; Keller, Vernon W.
2006-01-01
This document is the viewgraph slides of the presentation. Marshall Space Flight Center's Natural Environments Branch has developed Global Reference Atmospheric Models (GRAMs) for Mars, Venus, Earth, and other solar system destinations. Mars-GRAM has been widely used for engineering applications including systems design, performance analysis, and operations planning for aerobraking, entry descent and landing, and aerocapture. Preliminary results are presented, comparing Mars-GRAM with measurements from Mars Reconnaissance Orbiter (MRO) during its aerobraking in Mars thermosphere. Venus-GRAM is based on the Committee on Space Research (COSPAR) Venus International Reference Atmosphere (VIRA), and is suitable for similar engineering applications in the thermosphere or other altitude regions of the atmosphere of Venus. Until recently, the thermosphere in Earth-GRAM has been represented by the Marshall Engineering Thermosphere (MET) model. Earth-GRAM has recently been revised. In addition to including an updated version of MET, it now includes an option to use the Naval Research Laboratory Mass Spectrometer Incoherent Scatter Radar Extended Model (NRLMSISE-00) as an alternate thermospheric model. Some characteristics and results from Venus-GRAM and Earth-GRAM thermospheres are also presented.
A numerical model including PID control of a multizone crystal growth furnace
Panzarella, Charles H.; Kassemi, Mohammad
1992-01-01
This paper presents a 2D axisymmetric combined conduction and radiation model of a multizone crystal growth furnace. The model is based on a programmable multizone furnace (PMZF) designed and built at NASA Lewis Research Center for growing high quality semiconductor crystals. A novel feature of this model is a control algorithm which automatically adjusts the power in any number of independently controlled heaters to establish the desired crystal temperatures in the furnace model. The control algorithm eliminates the need for numerous trial and error runs previously required to obtain the same results. The finite element code, FIDAP, used to develop the furnace model, was modified to directly incorporate the control algorithm. This algorithm, which presently uses PID control, and the associated heat transfer model are briefly discussed. Together, they have been used to predict the heater power distributions for a variety of furnace configurations and desired temperature profiles. Examples are included to demonstrate the effectiveness of the PID controlled model in establishing isothermal, Bridgman, and other complicated temperature profies in the sample. Finally, an example is given to show how the algorithm can be used to change the desired profile with time according to a prescribed temperature-time evolution.
Directory of Open Access Journals (Sweden)
Hyein Lim
2013-01-01
Full Text Available Spin-torque oscillator (STO is a promising new technology for the future RF oscillators, which is based on the spin-transfer torque (STT effect in magnetic multilayered nanostructure. It is expected to provide a larger tunability, smaller size, lower power consumption, and higher level of integration than the semiconductor-based oscillators. In our previous work, a circuit-level model of the giant magnetoresistance (GMR STO was proposed. In this paper, we present a physics-based circuit-level model of the magnetic tunnel junction (MTJ-based STO. MTJ-STO model includes the effect of perpendicular torque that has been ignored in the GMR-STO model. The variations of three major characteristics, generation frequency, mean oscillation power, and generation linewidth of an MTJ-STO with respect to the amount of perpendicular torque, are investigated, and the results are applied to our model. The operation of the model was verified by HSPICE simulation, and the results show an excellent agreement with the experimental data. The results also prove that a full circuit-level simulation with MJT-STO devices can be made with our proposed model.
Energy Technology Data Exchange (ETDEWEB)
Tchamen, G.W.; Gaucher, J. [Hydro-Quebec Production, Montreal, PQ (Canada). Direction Barrage et Environnement, Unite Barrages et Hydraulique
2010-08-15
Owners and operators of high capacity dams in Quebec have a legal obligation to conduct dam break analysis for each of their dams in order to ensure public safety. This paper described traditional hydraulic methodologies and models used to perform dam break analyses. In particular, it examined the influence of the reservoir drawdown submodel on the numerical results of a dam break analysis. Numerical techniques from the field of fluid mechanics and aerodynamics have provided the basis for developing effective hydrodynamic codes that reduce the level of uncertainties associated with dam-break analysis. A static representation that considers the storage curve was compared with a dynamic representation based on Saint-Venant equations and the real bathymetry of the reservoir. The comparison was based on breach of reservoir, maximum water level, flooded area, and wave arrival time in the valley downstream. The study showed that the greatest difference in attained water level was in the vicinity of the dam, and the difference decreased as the distance from the reservoir increased. The analysis showed that the static representation overestimated the maximum depth and inundated area by as much as 20 percent. This overestimation can be reduced by 30 to 40 percent by using dynamic representation. A dynamic model based on a synthetic trapezoidal reconstruction of the storage curve was used, given the lack of bathymetric data for the reservoir. It was concluded that this model can significantly reduce the uncertainty associated with the static model. 7 refs., 9 tabs., 7 figs.
Walker, R. L., II; Knepley, M.; Aminzadeh, F.
2017-12-01
We seek to use the tools provided by the Portable, Extensible Toolkit for Scientific Computation (PETSc) to represent a multiphysics problem in a form that decouples the element definition from the fully coupled equation through the use of pointwise functions that imitate the strong form of the governing equation. This allows allows individual physical processes to be expressed as independent kernels that may be then coupled with the existing finite element framework, PyLith, and capitalizes upon the flexibility offered by the solver, data management, and time stepping algorithms offered by PETSc. To demonstrate a characteristic example of coupled geophysical simulation devised in this manner, we present a model of a synthetic poroelastic environment, with and without the consideration of inertial effects, with fluid initially represented as a single phase. Matrix displacement and fluid pressure serve as the desired unknowns, with the option for various model parameters represented as dependent variables of the central unknowns. While independent of PyLith, this model also serves to showcase the adaptability of physics kernels for synthetic forward modeling. In addition, we seek to expand the base case to demonstrate the impact of modeling fluid as single phase compressible versus a single incompressible phase. As a goal, we also seek to include multiphase fluid modeling, as well as capillary effects.
Wright, D. L.; McGraw, R.; Benkovitz, C. M.; Schwartz, S. E.
2000-04-01
This letter describes the first application of the Quadrature Method of Moments (QMOM) [McGraw, 1997] in a 3-D chemical transformation and transport model. The QMOM simultaneously tracks an arbitrary (even) number of moments of a particle size distribution directly in space and time without the need for explicitly representing the distribution itself. The host 3-D model, the Global Chemistry Model driven by Observation-derived meteorological data (GChM-O), has been previously described [Benkovitz et al., 1994]. The present implementation evolves the six lowest-order radial moments for each of several externally-mixed aerosol populations. From these moments we report modeled geographic distributions of several aerosol properties, including a shortwave radiative forcing obtained using the Multiple Isomomental Distribution Aerosol Surrogate (MIDAS) technique [Wright, 2000]. These results demonstrate the capabilities of these moment-based techniques to simultaneously represent aerosol nucleation, condensation, coagulation, dry deposition, wet removal, cloud activation, and transport processes in a large scale model, and to yield aerosol optical properties and radiative influence from the modeled aerosol.
Zampieri, Matteo
2012-02-01
Groundwater is an important component of the hydrological cycle, included in many land surface models to provide a lower boundary condition for soil moisture, which in turn plays a key role in the land-vegetation-atmosphere interactions and the ecosystem dynamics. In regional-scale climate applications land surface models (LSMs) are commonly coupled to atmospheric models to close the surface energy, mass and carbon balance. LSMs in these applications are used to resolve the momentum, heat, water and carbon vertical fluxes, accounting for the effect of vegetation, soil type and other surface parameters, while lack of adequate resolution prevents using them to resolve horizontal sub-grid processes. Specifically, LSMs resolve the large-scale runoff production associated with infiltration excess and sub-grid groundwater convergence, but they neglect the effect from loosing streams to groundwater. Through the analysis of observed data of soil moisture obtained from the Oklahoma Mesoscale Network stations and land surface temperature derived from MODIS we provide evidence that the regional scale soil moisture and surface temperature patterns are affected by the rivers. This is demonstrated on the basis of simulations from a land surface model (i.e., Community Land Model - CLM, version 3.5). We show that the model cannot reproduce the features of the observed soil moisture and temperature spatial patterns that are related to the underlying mechanism of reinfiltration of river water to groundwater. Therefore, we implement a simple parameterization of this process in CLM showing the ability to reproduce the soil moisture and surface temperature spatial variabilities that relate to the river distribution at regional scale. The CLM with this new parameterization is used to evaluate impacts of the improved representation of river-groundwater interactions on the simulated water cycle parameters and the surface energy budget at the regional scale. © 2011 Elsevier B.V.
National Aeronautics and Space Administration — This article presented a discussion on uncertainty representation and management for model-based prog- nostics methodologies based on the Bayesian tracking framework...
International Nuclear Information System (INIS)
Belich, H.; Cuba, G.; Paunov, R.
1997-12-01
Affine Toda theories based on simple Lie algebras G are known to posses soliton solutions. Toda solitons has been found by Olive, Turok and Underwood within the group-theoretical approach to the integrable field equations. Single solitons are created by exponentials of special elements of the underlying affine Lie algebra which diagonalize the adjoint action of the principal Heisenberg subalgebra. When G is simply laced and level one representations are considered, the generators of the affine Lie algebra are expressed in terms of the principal Heisenberg oscillators. This representation is known as vertex operator construction. It plays a crucial role in the string theory as well as in the conformal field theory. Alternatively, solitons can be generated from the vacuum by dressing transformations. The problem to relate dressing symmetry to the vertex operator representation of the tau functions for the sine-Gordon model was previously considered by Babelon and Bernard. In the present paper, we extend this relation for arbitrary A (1) n Toda field theory. (author)
Including Finite Surface Span Effects in Empirical Jet-Surface Interaction Noise Models
Brown, Clifford A.
2016-01-01
The effect of finite span on the jet-surface interaction noise source and the jet mixing noise shielding and reflection effects is considered using recently acquired experimental data. First, the experimental setup and resulting data are presented with particular attention to the role of surface span on far-field noise. These effects are then included in existing empirical models that have previously assumed that all surfaces are semi-infinite. This extended abstract briefly describes the experimental setup and data leaving the empirical modeling aspects for the final paper.
Directory of Open Access Journals (Sweden)
S. Metzger
2012-06-01
Full Text Available Water activity is a key factor in aerosol thermodynamics and hygroscopic growth. We introduce a new representation of water activity (a_{w}, which is empirically related to the solute molality (μ_{s} through a single solute specific constant, ν_{i}. Our approach is widely applicable, considers the Kelvin effect and covers ideal solutions at high relative humidity (RH, including cloud condensation nuclei (CCN activation. It also encompasses concentrated solutions with high ionic strength at low RH such as the relative humidity of deliquescence (RHD. The constant ν_{i} can thus be used to parameterize the aerosol hygroscopic growth over a wide range of particle sizes, from nanometer nucleation mode to micrometer coarse mode particles. In contrast to other a_{w}-representations, our ν_{i} factor corrects the solute molality both linearly and in exponent form x · a^{x}. We present four representations of our basic a_{w}-parameterization at different levels of complexity for different a_{w}-ranges, e.g. up to 0.95, 0.98 or 1. ν_{i} is constant over the selected a_{w}-range, and in its most comprehensive form, the parameterization describes the entire a_{w} range (0–1. In this work we focus on single solute solutions. ν_{i} can be pre-determined with a root-finding method from our water activity representation using an a_{w}−μ_{s} data pair, e.g. at solute saturation using RHD and solubility measurements. Our a_{w} and supersaturation (Köhler-theory results compare well with the thermodynamic reference model E-AIM for the key compounds NaCl and (NH_{4}_{2}SO_{4} relevant for CCN modeling and calibration studies. Envisaged applications include regional and global atmospheric chemistry and
Born, Jannis; Stringer, Simon M.
2017-01-01
A subset of neurons in the posterior parietal and premotor areas of the primate brain respond to the locations of visual targets in a hand-centred frame of reference. Such hand-centred visual representations are thought to play an important role in visually-guided reaching to target locations in space. In this paper we show how a biologically plausible, Hebbian learning mechanism may account for the development of localized hand-centred representations in a hierarchical neural network model of the primate visual system, VisNet. The hand-centered neurons developed in the model use an invariance learning mechanism known as continuous transformation (CT) learning. In contrast to previous theoretical proposals for the development of hand-centered visual representations, CT learning does not need a memory trace of recent neuronal activity to be incorporated in the synaptic learning rule. Instead, CT learning relies solely on a Hebbian learning rule, which is able to exploit the spatial overlap that naturally occurs between successive images of a hand-object configuration as it is shifted across different retinal locations due to saccades. Our simulations show how individual neurons in the network model can learn to respond selectively to target objects in particular locations with respect to the hand, irrespective of where the hand-object configuration occurs on the retina. The response properties of these hand-centred neurons further generalise to localised receptive fields in the hand-centred space when tested on novel hand-object configurations that have not been explored during training. Indeed, even when the network is trained with target objects presented across a near continuum of locations around the hand during training, the model continues to develop hand-centred neurons with localised receptive fields in hand-centred space. With the help of principal component analysis, we provide the first theoretical framework that explains the behavior of Hebbian learning
Directory of Open Access Journals (Sweden)
Jannis Born
Full Text Available A subset of neurons in the posterior parietal and premotor areas of the primate brain respond to the locations of visual targets in a hand-centred frame of reference. Such hand-centred visual representations are thought to play an important role in visually-guided reaching to target locations in space. In this paper we show how a biologically plausible, Hebbian learning mechanism may account for the development of localized hand-centred representations in a hierarchical neural network model of the primate visual system, VisNet. The hand-centered neurons developed in the model use an invariance learning mechanism known as continuous transformation (CT learning. In contrast to previous theoretical proposals for the development of hand-centered visual representations, CT learning does not need a memory trace of recent neuronal activity to be incorporated in the synaptic learning rule. Instead, CT learning relies solely on a Hebbian learning rule, which is able to exploit the spatial overlap that naturally occurs between successive images of a hand-object configuration as it is shifted across different retinal locations due to saccades. Our simulations show how individual neurons in the network model can learn to respond selectively to target objects in particular locations with respect to the hand, irrespective of where the hand-object configuration occurs on the retina. The response properties of these hand-centred neurons further generalise to localised receptive fields in the hand-centred space when tested on novel hand-object configurations that have not been explored during training. Indeed, even when the network is trained with target objects presented across a near continuum of locations around the hand during training, the model continues to develop hand-centred neurons with localised receptive fields in hand-centred space. With the help of principal component analysis, we provide the first theoretical framework that explains the behavior
Modeling of Temperature-Dependent Noise in Silicon Nanowire FETs including Self-Heating Effects
Directory of Open Access Journals (Sweden)
P. Anandan
2014-01-01
Full Text Available Silicon nanowires are leading the CMOS era towards the downsizing limit and its nature will be effectively suppress the short channel effects. Accurate modeling of thermal noise in nanowires is crucial for RF applications of nano-CMOS emerging technologies. In this work, a perfect temperature-dependent model for silicon nanowires including the self-heating effects has been derived and its effects on device parameters have been observed. The power spectral density as a function of thermal resistance shows significant improvement as the channel length decreases. The effects of thermal noise including self-heating of the device are explored. Moreover, significant reduction in noise with respect to channel thermal resistance, gate length, and biasing is analyzed.
Producing high-accuracy lattice models from protein atomic coordinates including side chains.
Mann, Martin; Saunders, Rhodri; Smith, Cameron; Backofen, Rolf; Deane, Charlotte M
2012-01-01
Lattice models are a common abstraction used in the study of protein structure, folding, and refinement. They are advantageous because the discretisation of space can make extensive protein evaluations computationally feasible. Various approaches to the protein chain lattice fitting problem have been suggested but only a single backbone-only tool is available currently. We introduce LatFit, a new tool to produce high-accuracy lattice protein models. It generates both backbone-only and backbone-side-chain models in any user defined lattice. LatFit implements a new distance RMSD-optimisation fitting procedure in addition to the known coordinate RMSD method. We tested LatFit's accuracy and speed using a large nonredundant set of high resolution proteins (SCOP database) on three commonly used lattices: 3D cubic, face-centred cubic, and knight's walk. Fitting speed compared favourably to other methods and both backbone-only and backbone-side-chain models show low deviation from the original data (~1.5 Å RMSD in the FCC lattice). To our knowledge this represents the first comprehensive study of lattice quality for on-lattice protein models including side chains while LatFit is the only available tool for such models.
A High-Rate, Single-Crystal Model including Phase Transformations, Plastic Slip, and Twinning
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Addessio, Francis L. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Bronkhorst, Curt Allan [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Bolme, Cynthia Anne [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Explosive Science and Shock Physics Division; Brown, Donald William [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Cerreta, Ellen Kathleen [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Lebensohn, Ricardo A. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Lookman, Turab [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Luscher, Darby Jon [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Mayeur, Jason Rhea [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Theoretical Division; Morrow, Benjamin M. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division; Rigg, Paulo A. [Washington State Univ., Pullman, WA (United States). Dept. of Physics. Inst. for Shock Physics
2016-08-09
An anisotropic, rate-dependent, single-crystal approach for modeling materials under the conditions of high strain rates and pressures is provided. The model includes the effects of large deformations, nonlinear elasticity, phase transformations, and plastic slip and twinning. It is envisioned that the model may be used to examine these coupled effects on the local deformation of materials that are subjected to ballistic impact or explosive loading. The model is formulated using a multiplicative decomposition of the deformation gradient. A plate impact experiment on a multi-crystal sample of titanium was conducted. The particle velocities at the back surface of three crystal orientations relative to the direction of impact were measured. Molecular dynamics simulations were conducted to investigate the details of the high-rate deformation and pursue issues related to the phase transformation for titanium. Simulations using the single crystal model were conducted and compared to the high-rate experimental data for the impact loaded single crystals. The model was found to capture the features of the experiments.
He, L Z; Dong, X Y; Sun, Y
1998-01-01
Affinity filtration is a developing protein purification technique that combines the high selectivity of affinity chromatography and the high processing speed of membrane filtration. In this work a lumped kinetic model was developed to describe the whole affinity filtration process, including broth feeding, contaminant washing, and elution steps. Affinity filtration experiments were conducted to evaluate the model using bovine serum albumin as a model protein and a highly substituted Blue Sepharose as an affinity adsorbent. The model with nonadjustable parameters agreed fairly to the experimental results. Thus, the performance of the affinity filtration in processing a crude broth containing contaminant proteins was analyzed by computer simulations using the lumped model. The simulation results show that there is an optimal protein loading for obtaining the maximum recovery yield of the desired protein with a constant purity at each operating condition. The concentration of a crude broth is beneficial in increasing the recovery yield of the desired protein. Using a constant amount of the affinity adsorbent, the recovery yield can be enhanced by decreasing the solution volume in the stirred tank due to the increase of the adsorbent weight fraction. It was found that the lumped kinetic model was simple and useful in analyzing the whole affinity filtration process.
Functional representations for quantized fields
International Nuclear Information System (INIS)
Jackiw, R.
1988-01-01
This paper provides information on Representing transformations in quantum theory bosonic quantum field theories: Schrodinger Picture; Represnting Transformations in Bosonic Quantum Field Theory; Two-Dimensional Conformal Transformations, Schrodinger picture representation, Fock space representation, Inequivalent Schrodinger picture representations; Discussion, Self-Dual and Other Models; Field Theory in de Sitter Space. Fermionic Quantum Field Theories: Schroedinger Picture; Schrodinger Picture Representation for Two-Dimensional; Conformal Transformations; Fock Space Dynamics in the Schrodinger Picture; Fock Space Evaluation of Anomalous Current and Conformal Commutators
Hanken, Katrin; Eling, Paul; Hildebrandt, Helmut
2014-01-01
In multiple sclerosis (MS) patients, fatigue is rated as one of the most common and disabling symptoms. However, the pathophysiology underlying this fatigue is not yet clear. Several lines of evidence suggest that immunological factors, such as elevated levels of pro-inflammatory cytokines, may contribute to subjective fatigue in MS patients. Pro-inflammatory cytokines represent primary mediators of immune-to-brain-communication, modulating changes in the neurophysiology of the central nervous system. Recently, we proposed a model arguing that fatigue in MS patients is a subjective feeling, which is related to inflammation. Moreover, it implies that fatigue can be measured behaviorally only by applying specific cognitive tasks related to alertness and vigilance. In the present review, we focus on the subjective feeling of MS-related fatigue. We examine the hypothesis that the subjective feeling of MS-related fatigue may be a variant of inflammation-induced sickness behavior, resulting from cytokine-mediated activity changes within brain areas involved in interoception and homeostasis including the insula, the anterior cingulate, and the hypothalamus. We first present studies demonstrating a relationship between pro-inflammatory cytokines and subjective fatigue in healthy individuals, in people with inflammatory disorders, and particularly in MS patients. Subsequently, we discuss studies analyzing the impact of anti-inflammatory treatment on fatigue. In the next part of this review, we present studies on the transmission and neural representation of inflammatory signals, with a special focus on possible neural concomitants of inflammation-induced fatigue. We also present two of our studies on the relationship between local gray and white matter atrophy and fatigue in MS patients. Finally, we discuss some implications of our findings and future perspectives. PMID:25566171
Directory of Open Access Journals (Sweden)
Katrin eHanken
2014-12-01
Full Text Available In multiple sclerosis (MS patients, fatigue is rated as one of the most common and disabling symptoms. However, the pathophysiology underlying this fatigue is not yet clear. Several lines of evidence suggest that immunological factors, such as elevated levels of proinflammatory cytokines, may contribute to subjective fatigue in MS patients. Proinflammatory cytokines represent primary mediators of immune-to-brain-communication, modulating changes in the neurophysiology of the central nervous system. Recently, we proposed a model arguing that fatigue in MS patients is a subjective feeling which is related to inflammation. Moreover, it implies that fatigue can be measured behaviorally only by applying specific cognitive tasks related to alertness and vigilance. In the present review we focus on the subjective feeling of MS-related fatigue. We examine the hypothesis that the subjective feeling of MS-related fatigue may be a variant of inflammation-induced sickness behavior, resulting from cytokine-mediated activity changes within brain areas involved in interoception and homeostasis including the insula, the anterior cingulate and the hypothalamus. We first present studies demonstrating a relationship between proinflammatory cytokines and subjective fatigue in healthy individuals, in people with inflammatory disorders, and particularly in MS patients. Subsequently, we discuss studies analyzing the impact of anti-inflammatory treatment on fatigue. In the next part of this review we present studies on the transmission and neural representation of inflammatory signals, with a special focus on possible neural concomitants of inflammation-induced fatigue. We also present two of our studies on the relationship between local gray and white matter atrophy and fatigue in MS patients. Finally, we discuss some implications of our findings and future perspectives.
Energy Technology Data Exchange (ETDEWEB)
NONE
1995-12-01
Several safety reports will be produced in the process of planning and constructing the system for disposal of high-level radioactive waste in Sweden. The present report gives a model, with detailed examples, of how these reports should be organized and what steps they should include. In the near future safety reports will deal with the encapsulation plant and the repository. Later reports will treat operation of the handling systems and the repository.
Collisional-radiative model including recombination processes for W27+ ion★
Murakami, Izumi; Sasaki, Akira; Kato, Daiji; Koike, Fumihiro
2017-10-01
We have constructed a collisional-radiative (CR) model for W27+ ions including 226 configurations with n ≤ 9 and ł ≤ 5 for spectroscopic diagnostics. We newly include recombination processes in the model and this is the first result of extreme ultraviolet spectrum calculated for recombining plasma component. Calculated spectra in 40-70 Å range in ionizing and recombining plasma components show similar 3 strong lines and 1 line weak in recombining plasma component at 45-50 Å and many weak lines at 50-65 Å for both components. Recombination processes do not contribute much to the spectrum at around 60 Å for W27+ ion. Dielectronic satellite lines are also minor contribution to the spectrum of recombining plasma component. Dielectronic recombination (DR) rate coefficient from W28+ to W27+ ions is also calculated with the same atomic data in the CR model. We found that larger set of energy levels including many autoionizing states gave larger DR rate coefficients but our rate agree within factor 6 with other works at electron temperature around 1 keV in which W27+ and W28+ ions are usually observed in plasmas. Contribution to the Topical Issue "Atomic and Molecular Data and their Applications", edited by Gordon W.F. Drake, Jung-Sik Yoon, Daiji Kato, and Grzegorz Karwasz.
Energy Technology Data Exchange (ETDEWEB)
Kollias, Pavlos [McGill Univ., Montreal, QC (Canada
2016-09-06
This the final report for the DE-SC0007096 - Advancing Clouds Lifecycle Representation in Numerical Models Using Innovative Analysis Methods that Bridge ARM Observations and Models Over a Breadth of Scales - PI: Pavlos Kollias. The final report outline the main findings of the research conducted using the aforementioned award in the area of cloud research from the cloud scale (10-100 m) to the mesoscale (20-50 km).
A 3D model of the oculomotor plant including the pulley system
Viegener, A.; Armentano, R. L.
2007-11-01
Early models of the oculomotor plant only considered the eye globes and the muscles that move them. Recently, connective tissue structures have been found enveloping the extraocular muscles (EOMs) and firmly anchored to the orbital wall. These structures act as pulleys; they determine the functional origin of the EOMs and, in consequence, their effective pulling direction. A three dimensional model of the oculomotor plant, including pulleys, has been developed and simulations in Simulink were performed during saccadic eye movements. Listing's law was implemented based on the supposition that there exists an eye orientation related signal. The inclusion of the pulleys in the model makes this assumption plausible and simplifies the problem of the plant noncommutativity.
Double-gate junctionless transistor model including short-channel effects
International Nuclear Information System (INIS)
Paz, B C; Pavanello, M A; Ávila-Herrera, F; Cerdeira, A
2015-01-01
This work presents a physically based model for double-gate junctionless transistors (JLTs), continuous in all operation regimes. To describe short-channel transistors, short-channel effects (SCEs), such as increase of the channel potential due to drain bias, carrier velocity saturation and mobility degradation due to vertical and longitudinal electric fields, are included in a previous model developed for long-channel double-gate JLTs. To validate the model, an analysis is made by using three-dimensional numerical simulations performed in a Sentaurus Device Simulator from Synopsys. Different doping concentrations, channel widths and channel lengths are considered in this work. Besides that, the series resistance influence is numerically included and validated for a wide range of source and drain extensions. In order to check if the SCEs are appropriately described, besides drain current, transconductance and output conductance characteristics, the following parameters are analyzed to demonstrate the good agreement between model and simulation and the SCEs occurrence in this technology: threshold voltage (V TH ), subthreshold slope (S) and drain induced barrier lowering. (paper)
Directory of Open Access Journals (Sweden)
R. J. Wichink Kruit
2012-12-01
Full Text Available A large shortcoming of current chemistry transport models (CTM for simulating the fate of ammonia in the atmosphere is the lack of a description of the bi-directional surface–atmosphere exchange. In this paper, results of an update of the surface–atmosphere exchange module DEPAC, i.e. DEPosition of Acidifying Compounds, in the chemistry transport model LOTOS-EUROS are discussed. It is shown that with the new description, which includes bi-directional surface–atmosphere exchange, the modeled ammonia concentrations increase almost everywhere, in particular in agricultural source areas. The reason is that by using a compensation point the ammonia lifetime and transport distance is increased. As a consequence, deposition of ammonia and ammonium decreases in agricultural source areas, while it increases in large nature areas and remote regions especially in southern Scandinavia. The inclusion of a compensation point for water reduces the dry deposition over sea and allows reproducing the observed marine background concentrations at coastal locations to a better extent. A comparison with measurements shows that the model results better represent the measured ammonia concentrations. The concentrations in nature areas are slightly overestimated, while the concentrations in agricultural source areas are still underestimated. Although the introduction of the compensation point improves the model performance, the modeling of ammonia remains challenging. Important aspects are emission patterns in space and time as well as a proper approach to deal with the high concentration gradients in relation to model resolution. In short, the inclusion of a bi-directional surface–atmosphere exchange is a significant step forward for modeling ammonia.
Including policy and management in socio-hydrology models: initial conceptualizations
Hermans, Leon; Korbee, Dorien
2017-04-01
Socio-hydrology studies the interactions in coupled human-water systems. So far, the use of dynamic models that capture the direct feedback between societal and hydrological systems has been dominant. What has not yet been included with any particular emphasis, is the policy or management layer, which is a central element in for instance integrated water resources management (IWRM) or adaptive delta management (ADM). Studying the direct interactions between human-water systems generates knowledges that eventually helps influence these interactions in ways that may ensure better outcomes - for society and for the health and sustainability of water systems. This influence sometimes occurs through spontaneous emergence, uncoordinated by societal agents - private sector, citizens, consumers, water users. However, the term 'management' in IWRM and ADM also implies an additional coordinated attempt through various public actors. This contribution is a call to include the policy and management dimension more prominently into the research focus of the socio-hydrology field, and offers first conceptual variables that should be considered in attempts to include this policy or management layer in socio-hydrology models. This is done by drawing on existing frameworks to study policy processes throughout both planning and implementation phases. These include frameworks such as the advocacy coalition framework, collective learning and policy arrangements, which all emphasis longer-term dynamics and feedbacks between actor coalitions in strategic planning and implementation processes. A case about longter-term dynamics in the management of the Haringvliet in the Netherlands is used to illustrate the paper.
Directory of Open Access Journals (Sweden)
Thang M. Luong
2018-01-01
Full Text Available A commonly noted problem in the simulation of warm season convection in the North American monsoon region has been the inability of atmospheric models at the meso-β scales (10 s to 100 s of kilometers to simulate organized convection, principally mesoscale convective systems. With the use of convective parameterization, high precipitation biases in model simulations are typically observed over the peaks of mountain ranges. To address this issue, the Kain–Fritsch (KF cumulus parameterization scheme has been modified with new diagnostic equations to compute the updraft velocity, the convective available potential energy closure assumption, and the convective trigger function. The scheme has been adapted for use in the Weather Research and Forecasting (WRF. A numerical weather prediction-type simulation is conducted for the North American Monsoon Experiment Intensive Observing Period 2 and a regional climate simulation is performed, by dynamically downscaling. In both of these applications, there are notable improvements in the WRF model-simulated precipitation due to the better representation of organized, propagating convection. The use of the modified KF scheme for atmospheric model simulations may provide a more computationally economical alternative to improve the representation of organized convection, as compared to convective-permitting simulations at the kilometer scale or a super-parameterization approach.
Luong, Thang
2018-01-22
A commonly noted problem in the simulation of warm season convection in the North American monsoon region has been the inability of atmospheric models at the meso-β scales (10 s to 100 s of kilometers) to simulate organized convection, principally mesoscale convective systems. With the use of convective parameterization, high precipitation biases in model simulations are typically observed over the peaks of mountain ranges. To address this issue, the Kain–Fritsch (KF) cumulus parameterization scheme has been modified with new diagnostic equations to compute the updraft velocity, the convective available potential energy closure assumption, and the convective trigger function. The scheme has been adapted for use in the Weather Research and Forecasting (WRF). A numerical weather prediction-type simulation is conducted for the North American Monsoon Experiment Intensive Observing Period 2 and a regional climate simulation is performed, by dynamically downscaling. In both of these applications, there are notable improvements in the WRF model-simulated precipitation due to the better representation of organized, propagating convection. The use of the modified KF scheme for atmospheric model simulations may provide a more computationally economical alternative to improve the representation of organized convection, as compared to convective-permitting simulations at the kilometer scale or a super-parameterization approach.
Harmonic Analysis and Group Representation
Figa-Talamanca, Alessandro
2011-01-01
This title includes: Lectures - A. Auslander, R. Tolimeri - Nilpotent groups and abelian varieties, M Cowling - Unitary and uniformly bounded representations of some simple Lie groups, M. Duflo - Construction de representations unitaires d'un groupe de Lie, R. Howe - On a notion of rank for unitary representations of the classical groups, V.S. Varadarajan - Eigenfunction expansions of semisimple Lie groups, and R. Zimmer - Ergodic theory, group representations and rigidity; and, Seminars - A. Koranyi - Some applications of Gelfand pairs in classical analysis.
International Nuclear Information System (INIS)
2015-11-01
The demands on nuclear fuel have recently been increasing, and include transient regimes, higher discharge burnup and longer fuel cycles. This has resulted in an increase of loads on fuel and core internals. In order to satisfy these demands while ensuring compliance with safety criteria, new national and international programmes have been launched and advanced modelling codes are being developed. The Fukushima Daiichi accident has particularly demonstrated the need for adequate analysis of all aspects of fuel performance to prevent a failure and also to predict fuel behaviour were an accident to occur.This publication presents the Proceedings of the Technical Meeting on Modelling of Water Cooled Fuel Including Design Basis and Severe Accidents, which was hosted by the Nuclear Power Institute of China (NPIC) in Chengdu, China, following the recommendation made in 2013 at the IAEA Technical Working Group on Fuel Performance and Technology. This recommendation was in agreement with IAEA mid-term initiatives, linked to the post-Fukushima IAEA Nuclear Safety Action Plan, as well as the forthcoming Coordinated Research Project (CRP) on Fuel Modelling in Accident Conditions. At the technical meeting in Chengdu, major areas and physical phenomena, as well as types of code and experiment to be studied and used in the CRP, were discussed. The technical meeting provided a forum for international experts to review the state of the art of code development for modelling fuel performance of nuclear fuel for water cooled reactors with regard to steady state and transient conditions, and for design basis and early phases of severe accidents, including experimental support for code validation. A round table discussion focused on the needs and perspectives on fuel modelling in accident conditions. This meeting was the ninth in a series of IAEA meetings, which reflects Member States’ continuing interest in nuclear fuel issues. The previous meetings were held in 1980 (jointly with
Kim, Sun Jung; Yoo, Il Young
2016-03-01
The purpose of this study was to explain the health promotion behavior of Chinese international students in Korea using a structural equation model including acculturation factors. A survey using self-administered questionnaires was employed. Data were collected from 272 Chinese students who have resided in Korea for longer than 6 months. The data were analyzed using structural equation modeling. The p value of final model is .31. The fitness parameters of the final model such as goodness of fit index, adjusted goodness of fit index, normed fit index, non-normed fit index, and comparative fit index were more than .95. Root mean square of residual and root mean square error of approximation also met the criteria. Self-esteem, perceived health status, acculturative stress and acculturation level had direct effects on health promotion behavior of the participants and the model explained 30.0% of variance. The Chinese students in Korea with higher self-esteem, perceived health status, acculturation level, and lower acculturative stress reported higher health promotion behavior. The findings can be applied to develop health promotion strategies for this population. Copyright © 2016. Published by Elsevier B.V.
Energy Technology Data Exchange (ETDEWEB)
Augustine, C.
2011-10-01
The U.S. Department of Energy (DOE) Geothermal Technologies Program (GTP) tasked the National Renewable Energy Laboratory (NREL) with conducting the annual geothermal supply curve update. This report documents the approach taken to identify geothermal resources, determine the electrical producing potential of these resources, and estimate the levelized cost of electricity (LCOE), capital costs, and operating and maintenance costs from these geothermal resources at present and future timeframes under various GTP funding levels. Finally, this report discusses the resulting supply curve representation and how improvements can be made to future supply curve updates.
A structural model for the in vivo human cornea including collagen-swelling interaction.
Cheng, Xi; Petsche, Steven J; Pinsky, Peter M
2015-08-06
A structural model of the in vivo cornea, which accounts for tissue swelling behaviour, for the three-dimensional organization of stromal fibres and for collagen-swelling interaction, is proposed. Modelled as a binary electrolyte gel in thermodynamic equilibrium, the stromal electrostatic free energy is based on the mean-field approximation. To account for active endothelial ionic transport in the in vivo cornea, which modulates osmotic pressure and hydration, stromal mobile ions are shown to satisfy a modified Boltzmann distribution. The elasticity of the stromal collagen network is modelled based on three-dimensional collagen orientation probability distributions for every point in the stroma obtained by synthesizing X-ray diffraction data for azimuthal angle distributions and second harmonic-generated image processing for inclination angle distributions. The model is implemented in a finite-element framework and employed to predict free and confined swelling of stroma in an ionic bath. For the in vivo cornea, the model is used to predict corneal swelling due to increasing intraocular pressure (IOP) and is adapted to model swelling in Fuchs' corneal dystrophy. The biomechanical response of the in vivo cornea to a typical LASIK surgery for myopia is analysed, including tissue fluid pressure and swelling responses. The model provides a new interpretation of the corneal active hydration control (pump-leak) mechanism based on osmotic pressure modulation. The results also illustrate the structural necessity of fibre inclination in stabilizing the corneal refractive surface with respect to changes in tissue hydration and IOP. © 2015 The Author(s).
Zaehle, S.; Caldararu, S.
2015-12-01
Foliar nitrogen (N) is know to acclimate to environmental conditions. One particular pertinent response is the general decline in foliar N following exposure to elevated levels of atmospheric CO2 (eCO2). Associated with reduced foliar N is an increased plant nitrogen-use efficiency, which contributes to the plants' sustained growth response to eCO2 in the absence of any counteracting litter N feedbacks. Flexible leaf N thus has important consequences for the mid- to long-term response of terrestrial ecosystems to eCO2. The current generation of land-surface models including a prognostic N cycle generally employ heuristic, and simply mass-balancing parameterisations to estimate changes in stoichiometry given altered N and carbon (C) availability. This generation generally and substantially overestimates the decline of foliar N (and thus the increase in plant nitrogen use efficiency) observed in Free Air CO2 Enrichment Experiments (FACE; Zaehle et al. 2014). In this presentation, I develop a simple, prognostic and dynamic representation of flexible foliar N for use in land-surface models by maximising the marginal gain of net assimilation with respect to the energy investment to generate foliar area and foliar N. I elucidate the underlying assumptions required to simulate the commonly observed decline in foliar N with eCO2 under different scenarios of N availability (Feng et al. 2015). References: Zaehle, Sönke, Belinda E Medlyn, Martin G De Kauwe, Anthony P Walker, Michael C Dietze, Hickler Thomas, Yiqi Luo, et al. 2014. "Evaluation of 11 Terrestrial Carbon-Nitrogen Cycle Models Against Observations From Two Temperate Free-Air CO2 Enrichment Studies." New Phytologist 202 (3): 803-22. doi:10.1111/nph.12697. Feng, Zhaozhong, Tobias RUtting, Håkan Pleijel, GORAN WALLIN, Peter B Reich, Claudia I Kammann, Paul C D Newton, Kazuhiko Kobayashi, Yunjian Luo, and Johan Uddling. 2015. "Constraints to Nitrogen Acquisition of Terrestrial Plants Under Elevated CO 2." Global
International Nuclear Information System (INIS)
Smith, Curtis L.; Prescott, Steven; Kvarfordt, Kellie; Sampath, Ram; Larson, Katie
2015-01-01
Early in 2013, researchers at the Idaho National Laboratory outlined a technical framework to support the implementation of state-of-the-art probabilistic risk assessment to predict the safety performance of advanced small modular reactors. From that vision of the advanced framework for risk analysis, specific tasks have been underway in order to implement the framework. This report discusses the current development of a several tasks related to the framework implementation, including a discussion of a 3D physics engine that represents the motion of objects (including collision and debris modeling), cloud-based analysis tools such as a Bayesian-inference engine, and scenario simulations. These tasks were performed during 2015 as part of the technical work associated with the Advanced Reactor Technologies Program.
Energy Technology Data Exchange (ETDEWEB)
Smith, Curtis L. [Idaho National Lab. (INL), Idaho Falls, ID (United States); Prescott, Steven [Idaho National Lab. (INL), Idaho Falls, ID (United States); Kvarfordt, Kellie [Idaho National Lab. (INL), Idaho Falls, ID (United States); Sampath, Ram [Idaho National Lab. (INL), Idaho Falls, ID (United States); Larson, Katie [Idaho National Lab. (INL), Idaho Falls, ID (United States)
2015-09-01
Early in 2013, researchers at the Idaho National Laboratory outlined a technical framework to support the implementation of state-of-the-art probabilistic risk assessment to predict the safety performance of advanced small modular reactors. From that vision of the advanced framework for risk analysis, specific tasks have been underway in order to implement the framework. This report discusses the current development of a several tasks related to the framework implementation, including a discussion of a 3D physics engine that represents the motion of objects (including collision and debris modeling), cloud-based analysis tools such as a Bayesian-inference engine, and scenario simulations. These tasks were performed during 2015 as part of the technical work associated with the Advanced Reactor Technologies Program.
A satellite relative motion model including J_2 and J_3 via Vinti's intermediary
Biria, Ashley D.; Russell, Ryan P.
2018-03-01
Vinti's potential is revisited for analytical propagation of the main satellite problem, this time in the context of relative motion. A particular version of Vinti's spheroidal method is chosen that is valid for arbitrary elliptical orbits, encapsulating J_2, J_3, and generally a partial J_4 in an orbit propagation theory without recourse to perturbation methods. As a child of Vinti's solution, the proposed relative motion model inherits these properties. Furthermore, the problem is solved in oblate spheroidal elements, leading to large regions of validity for the linearization approximation. After offering several enhancements to Vinti's solution, including boosts in accuracy and removal of some singularities, the proposed model is derived and subsequently reformulated so that Vinti's solution is piecewise differentiable. While the model is valid for the critical inclination and nonsingular in the element space, singularities remain in the linear transformation from Earth-centered inertial coordinates to spheroidal elements when the eccentricity is zero or for nearly equatorial orbits. The new state transition matrix is evaluated against numerical solutions including the J_2 through J_5 terms for a wide range of chief orbits and separation distances. The solution is also compared with side-by-side simulations of the original Gim-Alfriend state transition matrix, which considers the J_2 perturbation. Code for computing the resulting state transition matrix and associated reference frame and coordinate transformations is provided online as supplementary material.
Mohammad, S. Noor
2010-09-01
Semiconductor nanotubes, including carbon nanotubes, have vast potential for new technology development. The fundamental physics and growth kinetics of these nanotubes are still obscured. Various models developed to elucidate the growth suffer from limited applicability. An in-depth investigation of the fundamentals of nanotube growth has, therefore, been carried out. For this investigation, various features of nanotube growth, and the role of the foreign element catalytic agent (FECA) in this growth, have been considered. Observed growth anomalies have been analyzed. Based on this analysis, a new shell model and a general hypothesis have been proposed for the growth. The essential element of the shell model is the seed generated from segregation during growth. The seed structure has been defined, and the formation of droplet from this seed has been described. A modified definition of the droplet exhibiting adhesive properties has also been presented. Various characteristics of the droplet, required for alignment and organization of atoms into tubular forms, have been discussed. Employing the shell model, plausible scenarios for the formation of carbon nanotubes, and the variation in the characteristics of these carbon nanotubes have been articulated. The experimental evidences, for example, for the formation of shell around a core, dipole characteristics of the seed, and the existence of nanopores in the seed, have been presented. They appear to justify the validity of the proposed model. The diversities of nanotube characteristics, fundamentals underlying the creation of bamboo-shaped carbon nanotubes, and the impurity generation on the surface of carbon nanotubes have been elucidated. The catalytic action of FECA on growth has been quantified. The applicability of the proposed model to the nanotube growth by a variety of mechanisms has been elaborated. These mechanisms include the vapor-liquid-solid mechanism, the oxide-assisted growth mechanism, the self
A new model for including the effect of fly ash on biochemical methane potential.
Gertner, Pablo; Huiliñir, César; Pinto-Villegas, Paula; Castillo, Alejandra; Montalvo, Silvio; Guerrero, Lorna
2017-10-01
The modelling of the effect of trace elements on anaerobic digestion, and specifically the effect of fly ash, has been scarcely studied. Thus, the present work was aimed at the development of a new function that allows accumulated methane models to predict the effect of FA on the volume of methane accumulation. For this, purpose five fly ash concentrations (10, 25, 50, 250 and 500mg/L) using raw and pre-treated sewage sludge were used to calibrate the new function, while three fly ash concentrations were used (40, 150 and 350mg/L) for validation. Three models for accumulated methane volume (the modified Gompertz equation, the logistic function, and the transfer function) were evaluated. The results showed that methane production increased in the presence of FA when the sewage sludge was not pre-treated, while with pretreated sludge there is inhibition of methane production at FA concentrations higher than 50mg/L. In the calibration of the proposed function, it fits well with the experimental data under all the conditions, including the inhibition and stimulating zones, with the values of the parameters of the methane production models falling in the range of those reported in the literature. For validation experiments, the model succeeded in representing the behavior of new experiments in both the stimulating and inhibiting zones, with NRMSE and R 2 ranging from 0.3577 to 0.03714 and 0.2209 to 0.9911, respectively. Thus, the proposed model is robust and valid for the studied conditions. Copyright © 2017 Elsevier Ltd. All rights reserved.
Directory of Open Access Journals (Sweden)
D. O. Topping
2005-01-01
Full Text Available This paper describes the inclusion of organic particulate material within the Aerosol Diameter Dependent Equilibrium Model (ADDEM framework described in the companion paper applied to inorganic aerosol components. The performance of ADDEM is analysed in terms of its capability to reproduce the behaviour of various organic and mixed inorganic/organic systems using recently published bulk data. Within the modelling architecture already described two separate thermodynamic models are coupled in an additive approach and combined with a method for solving the Kohler equation in order to develop a tool for predicting the water content associated with an aerosol of known inorganic/organic composition and dry size. For development of the organic module, the widely used group contribution method UNIFAC is employed to explicitly deal with the non-ideality in solution. The UNIFAC predictions for components of atmospheric importance were improved considerably by using revised interaction parameters derived from electro-dynamic balance studies. Using such parameters, the model was found to adequately describe mixed systems including 5–6 dicarboxylic acids, down to low relative humidity conditions. By comparison with electrodynamic balance data, it was also found that the model was capable of capturing the behaviour of aqueous aerosols containing Suwannee River Fulvic acid, a structure previously used to represent the functionality of complex oxidised macromolecules often found in atmospheric aerosols. The additive approach for modelling mixed inorganic/organic systems worked well for a variety of mixtures. As expected, deviations between model predictions and measurements increase with increasing concentration. Available surface tension models, used in evaluating the Kelvin term, were found to reproduce measured data with varying success. Deviations from experimental data increased with increased organic compound complexity. For components only slightly
A curved multi-component aerosol hygroscopicity model framework: Part 2 Including organic compounds
Topping, D. O.; McFiggans, G. B.; Coe, H.
2005-05-01
This paper describes the inclusion of organic particulate material within the Aerosol Diameter Dependent Equilibrium Model (ADDEM) framework described in the companion paper applied to inorganic aerosol components. The performance of ADDEM is analysed in terms of its capability to reproduce the behaviour of various organic and mixed inorganic/organic systems using recently published bulk data. Within the modelling architecture already described two separate thermodynamic models are coupled in an additive approach and combined with a method for solving the Kohler equation in order to develop a tool for predicting the water content associated with an aerosol of known inorganic/organic composition and dry size. For development of the organic module, the widely used group contribution method UNIFAC is employed to explicitly deal with the non-ideality in solution. The UNIFAC predictions for components of atmospheric importance were improved considerably by using revised interaction parameters derived from electro-dynamic balance studies. Using such parameters, the model was found to adequately describe mixed systems including 5-6 dicarboxylic acids, down to low relative humidity conditions. By comparison with electrodynamic balance data, it was also found that the model was capable of capturing the behaviour of aqueous aerosols containing Suwannee River Fulvic acid, a structure previously used to represent the functionality of complex oxidised macromolecules often found in atmospheric aerosols. The additive approach for modelling mixed inorganic/organic systems worked well for a variety of mixtures. As expected, deviations between model predictions and measurements increase with increasing concentration. Available surface tension models, used in evaluating the Kelvin term, were found to reproduce measured data with varying success. Deviations from experimental data increased with increased organic compound complexity. For components only slightly soluble in water
A generalized model for optimal transport of images including dissipation and density modulation
Maas, Jan
2015-11-01
© EDP Sciences, SMAI 2015. In this paper the optimal transport and the metamorphosis perspectives are combined. For a pair of given input images geodesic paths in the space of images are defined as minimizers of a resulting path energy. To this end, the underlying Riemannian metric measures the rate of transport cost and the rate of viscous dissipation. Furthermore, the model is capable to deal with strongly varying image contrast and explicitly allows for sources and sinks in the transport equations which are incorporated in the metric related to the metamorphosis approach by Trouvé and Younes. In the non-viscous case with source term existence of geodesic paths is proven in the space of measures. The proposed model is explored on the range from merely optimal transport to strongly dissipative dynamics. For this model a robust and effective variational time discretization of geodesic paths is proposed. This requires to minimize a discrete path energy consisting of a sum of consecutive image matching functionals. These functionals are defined on corresponding pairs of intensity functions and on associated pairwise matching deformations. Existence of time discrete geodesics is demonstrated. Furthermore, a finite element implementation is proposed and applied to instructive test cases and to real images. In the non-viscous case this is compared to the algorithm proposed by Benamou and Brenier including a discretization of the source term. Finally, the model is generalized to define discrete weighted barycentres with applications to textures and objects.
Empirical Validation of a Thermal Model of a Complex Roof Including Phase Change Materials
Directory of Open Access Journals (Sweden)
Stéphane Guichard
2015-12-01
Full Text Available This paper deals with the empirical validation of a building thermal model of a complex roof including a phase change material (PCM. A mathematical model dedicated to PCMs based on the heat apparent capacity method was implemented in a multi-zone building simulation code, the aim being to increase the understanding of the thermal behavior of the whole building with PCM technologies. In order to empirically validate the model, the methodology is based both on numerical and experimental studies. A parametric sensitivity analysis was performed and a set of parameters of the thermal model has been identified for optimization. The use of the generic optimization program called GenOpt® coupled to the building simulation code enabled to determine the set of adequate parameters. We first present the empirical validation methodology and main results of previous work. We then give an overview of GenOpt® and its coupling with the building simulation code. Finally, once the optimization results are obtained, comparisons of the thermal predictions with measurements are found to be acceptable and are presented.
A multiscale model for glioma spread including cell-tissue interactions and proliferation.
Engwer, Christian; Knappitsch, Markus; Surulescu, Christina
2016-04-01
Glioma is a broad class of brain and spinal cord tumors arising from glia cells, which are the main brain cells that can develop into neoplasms. They are highly invasive and lead to irregular tumor margins which are not precisely identifiable by medical imaging, thus rendering a precise enough resection very difficult. The understanding of glioma spread patterns is hence essential for both radiological therapy as well as surgical treatment. In this paper we propose a multiscale model for glioma growth including interactions of the cells with the underlying tissue network, along with proliferative effects. Our current accounting for two subpopulations of cells to accomodate proliferation according to the go-or-grow dichtomoty is an extension of the setting in [16]. As in that paper, we assume that cancer cells use neuronal fiber tracts as invasive pathways. Hence, the individual structure of brain tissue seems to be decisive for the tumor spread. Diffusion tensor imaging (DTI) is able to provide such information, thus opening the way for patient specific modeling of glioma invasion. Starting from a multiscale model involving subcellular (microscopic) and individual (mesoscale) cell dynamics, we perform a parabolic scaling to obtain an approximating reaction-diffusion-transport equation on the macroscale of the tumor cell population. Numerical simulations based on DTI data are carried out in order to assess the performance of our modeling approach.
Habitability of super-Earth planets around other suns: models including Red Giant Branch evolution.
von Bloh, W; Cuntz, M; Schröder, K-P; Bounama, C; Franck, S
2009-01-01
The unexpected diversity of exoplanets includes a growing number of super-Earth planets, i.e., exoplanets with masses of up to several Earth masses and a similar chemical and mineralogical composition as Earth. We present a thermal evolution model for a 10 Earth-mass planet orbiting a star like the Sun. Our model is based on the integrated system approach, which describes the photosynthetic biomass production and takes into account a variety of climatological, biogeochemical, and geodynamical processes. This allows us to identify a so-called photosynthesis-sustaining habitable zone (pHZ), as determined by the limits of biological productivity on the planetary surface. Our model considers solar evolution during the main-sequence stage and along the Red Giant Branch as described by the most recent solar model. We obtain a large set of solutions consistent with the principal possibility of life. The highest likelihood of habitability is found for "water worlds." Only mass-rich water worlds are able to realize pHZ-type habitability beyond the stellar main sequence on the Red Giant Branch.
Analysis of electronic models for solar cells including energy resolved defect densities
Energy Technology Data Exchange (ETDEWEB)
Glitzky, Annegret
2010-07-01
We introduce an electronic model for solar cells including energy resolved defect densities. The resulting drift-diffusion model corresponds to a generalized van Roosbroeck system with additional source terms coupled with ODEs containing space and energy as parameters for all defect densities. The system has to be considered in heterostructures and with mixed boundary conditions from device simulation. We give a weak formulation of the problem. If the boundary data and the sources are compatible with thermodynamic equilibrium the free energy along solutions decays monotonously. In other cases it may be increasing, but we estimate its growth. We establish boundedness and uniqueness results and prove the existence of a weak solution. This is done by considering a regularized problem, showing its solvability and the boundedness of its solutions independent of the regularization level. (orig.)
Effect of including decay chains on predictions of equilibrium-type terrestrial food chain models
International Nuclear Information System (INIS)
Kirchner, G.
1990-01-01
Equilibrium-type food chain models are commonly used for assessing the radiological impact to man from environmental releases of radionuclides. Usually these do not take into account build-up of radioactive decay products during environmental transport. This may be a potential source of underprediction. For estimating consequences of this simplification, the equations of an internationally recognised terrestrial food chain model have been extended to include decay chains of variable length. Example calculations show that for releases from light water reactors as expected both during routine operation and in the case of severe accidents, the build-up of decay products during environmental transport is generally of minor importance. However, a considerable number of radionuclides of potential radiological significance have been identified which show marked contributions of decay products to calculated contamination of human food and resulting radiation dose rates. (author)
Directory of Open Access Journals (Sweden)
B. Ervens
2012-07-01
Full Text Available Ice nucleation in clouds is often observed at temperatures >235 K, pointing to heterogeneous freezing as a predominant mechanism. Many models deterministically predict the number concentration of ice particles as a function of temperature and/or supersaturation. Several laboratory experiments, at constant temperature and/or supersaturation, report heterogeneous freezing as a stochastic, time-dependent process that follows classical nucleation theory; this might appear to contradict deterministic models that predict singular freezing behavior.
We explore the extent to which the choice of nucleation scheme (deterministic/stochastic, single/multiple contact angles θ affects the prediction of the fraction of frozen ice nuclei (IN and cloud evolution for a predetermined maximum IN concentration. A box model with constant temperature and supersaturation is used to mimic published laboratory experiments of immersion freezing of monodisperse (800 nm kaolinite particles (~243 K, and the fitness of different nucleation schemes. Sensitivity studies show that agreement of all five schemes is restricted to the narrow parameter range (time, temperature, IN diameter in the original laboratory studies, and that model results diverge for a wider range of conditions.
The schemes are implemented in an adiabatic parcel model that includes feedbacks of the formation and growth of drops and ice particles on supersaturation during ascent. Model results for the monodisperse IN population (800 nm show that these feedbacks limit ice nucleation events, often leading to smaller differences in number concentration of ice particles and ice water content (IWC between stochastic and deterministic approaches than expected from the box model studies. However, because the different parameterizations of θ distributions and time-dependencies are highly sensitive to IN size, simulations using polydisperse IN result in great differences in predicted ice number
Energy Technology Data Exchange (ETDEWEB)
Elsworth, Derek [Pennsylvania State Univ., State College, PA (United States); Izadi, Ghazal [Pennsylvania State Univ., State College, PA (United States); Gan, Quan [Pennsylvania State Univ., State College, PA (United States); Fang, Yi [Pennsylvania State Univ., State College, PA (United States); Taron, Josh [US Geological Survey, Menlo Park, CA (United States); Sonnenthal, Eric [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
2015-07-28
This work has investigated the roles of effective stress induced by changes in fluid pressure, temperature and chemistry in contributing to the evolution of permeability and induced seismicity in geothermal reservoirs. This work has developed continuum models [1] to represent the progress or seismicity during both stimulation [2] and production [3]. These methods have been used to resolve anomalous observations of induced seismicity at the Newberry Volcano demonstration project [4] through the application of modeling and experimentation. Later work then focuses on the occurrence of late stage seismicity induced by thermal stresses [5] including the codifying of the timing and severity of such responses [6]. Furthermore, mechanistic linkages between observed seismicity and the evolution of permeability have been developed using data from the Newberry project [7] and benchmarked against field injection experiments. Finally, discontinuum models [8] incorporating the roles of discrete fracture networks have been applied to represent stimulation and then thermal recovery for new arrangements of geothermal wells incorporating the development of flow manifolds [9] in order to increase thermal output and longevity in EGS systems.
Including sugar cane in the agro-ecosystem model ORCHIDEE-STICS
Valade, A.; Vuichard, N.; Ciais, P.; Viovy, N.
2010-12-01
With 4 million ha currently grown for ethanol in Brazil only, approximately half the global bioethanol production in 2005 (Smeets 2008), and a devoted land area expected to expand globally in the years to come, sugar cane is at the heart of the biofuel debate. Indeed, ethanol made from biomass is currently the most widespread option for alternative transportation fuels. It was originally promoted as a carbon neutral energy resource that could bring energy independence to countries and local opportunities to farmers, until attention was drawn to its environmental and socio-economical drawbacks. It is still not clear to which extent it is a solution or a contributor to climate change mitigation. Dynamic Global Vegetation models can help address these issues and quantify the potential impacts of biofuels on ecosystems at scales ranging from on-site to global. The global agro-ecosystem model ORCHIDEE describes water, carbon and energy exchanges at the soil-atmosphere interface for a limited number of natural and agricultural vegetation types. In order to integrate agricultural management to the simulations and to capture more accurately the specificity of crops' phenology, ORCHIDEE has been coupled with the agronomical model STICS. The resulting crop-oriented vegetation model ORCHIDEE-STICS has been used so far to simulate temperate crops such as wheat, corn and soybean. As a generic ecosystem model, each grid cell can include several vegetation types with their own phenology and management practices, making it suitable to spatial simulations. Here, ORCHIDEE-STICS is altered to include sugar cane as a new agricultural Plant functional Type, implemented and parametrized using the STICS approach. An on-site calibration and validation is then performed based on biomass and flux chamber measurements in several sites in Australia and variables such as LAI, dry weight, heat fluxes and respiration are used to evaluate the ability of the model to simulate the specific
Moretti, Rocco; Lyskov, Sergey; Das, Rhiju; Meiler, Jens; Gray, Jeffrey J
2018-01-01
The Rosetta molecular modeling software package provides a large number of experimentally validated tools for modeling and designing proteins, nucleic acids, and other biopolymers, with new protocols being added continually. While freely available to academic users, external usage is limited by the need for expertise in the Unix command line environment. To make Rosetta protocols available to a wider audience, we previously created a web server called Rosetta Online Server that Includes Everyone (ROSIE), which provides a common environment for hosting web-accessible Rosetta protocols. Here we describe a simplification of the ROSIE protocol specification format, one that permits easier implementation of Rosetta protocols. Whereas the previous format required creating multiple separate files in different locations, the new format allows specification of the protocol in a single file. This new, simplified protocol specification has more than doubled the number of Rosetta protocols available under ROSIE. These new applications include pK a determination, lipid accessibility calculation, ribonucleic acid redesign, protein-protein docking, protein-small molecule docking, symmetric docking, antibody docking, cyclic toxin docking, critical binding peptide determination, and mapping small molecule binding sites. ROSIE is freely available to academic users at http://rosie.rosettacommons.org. © 2017 The Protein Society.
A curved multi-component aerosol hygroscopicity model framework: 2 Including organics
Topping, D. O.; McFiggans, G. B.; Coe, H.
2004-12-01
This paper describes the inclusion of organic particulate material within the Aerosol Diameter Dependent Equilibrium Model (ADDEM) framework described in the companion paper applied to inorganic aerosol components. The performance of ADDEM is analysed in terms of its capability to reproduce the behaviour of various organic and mixed inorganic/organic systems using recently published bulk data. Within the modelling architecture already described two separate thermodynamic models are coupled in an additive approach and combined with a method for solving the Köhler equation in order to develop a tool for predicting the water content associated with an aerosol of known inorganic/organic composition and dry size. For development of the organic module, the widely used group contribution method UNIFAC is employed to explicitly deal with the non-ideality in solution. The UNIFAC predictions for components of atmospheric importance were improved considerably by using revised interaction parameters derived from electro-dynamic balance studies. Using such parameters, the model was found to adequately describe mixed systems including 5-6 dicarboxylic acids, down to low relative humidity conditions. The additive approach for modelling mixed inorganic/organic systems worked well for a variety of mixtures. As expected, deviations between predicted and measured data increase with increasing concentration. Available surface tension models, used in evaluating the Kelvin term, were found to reproduce measured data with varying success. Deviations from experimental data increased with increased organic compound complexity. For components only slightly soluble in water, significant deviations from measured surface tension depression behaviour were predicted with both model formalisms tested. A Sensitivity analysis showed that such variation is likely to lead to predicted growth factors within the measurement uncertainty for growth factor taken in the sub-saturated regime. Greater
Directory of Open Access Journals (Sweden)
Jankowski Piotr
2014-09-01
Full Text Available Health care accessibility can be measured by the number of prospective patients who could reach a medical facility within a prescribed time limit. The representation of health care demand in estimating accessibility is an important consideration since different spatial aggregations of demand have different consequences with regard to accessibility estimates. This article examines the effects of aggregating population demand for primary health care, ranging from census tract to aggregated census block, on estimates of primary health care accessibility. Spatial representations of aggregated demand were incorporated into a location-allocation model in order to determine a measure of accessibility represented by the unmet demand for primary health care services. The model was implemented for the U.S. State of Idaho, based on the allocation of Idaho residents’ demand for primary health care to the state’s existing primary health care facilities. The results confirm a relationship between the level of demand aggregation and the level of potential accessibility. In case of a rural state such as Idaho the relationship is positive; higher levels of aggregation result in higher measures of accessibility.
Zhang, Zutao; Luo, Dianyuan; Rasim, Yagubov; Li, Yanjun; Meng, Guanjun; Xu, Jian; Wang, Chunbai
2016-02-19
In this paper, we present a vehicle active safety model for vehicle speed control based on driver vigilance detection using low-cost, comfortable, wearable electroencephalographic (EEG) sensors and sparse representation. The proposed system consists of three main steps, namely wireless wearable EEG collection, driver vigilance detection, and vehicle speed control strategy. First of all, a homemade low-cost comfortable wearable brain-computer interface (BCI) system with eight channels is designed for collecting the driver's EEG signal. Second, wavelet de-noising and down-sample algorithms are utilized to enhance the quality of EEG data, and Fast Fourier Transformation (FFT) is adopted to extract the EEG power spectrum density (PSD). In this step, sparse representation classification combined with k-singular value decomposition (KSVD) is firstly introduced in PSD to estimate the driver's vigilance level. Finally, a novel safety strategy of vehicle speed control, which controls the electronic throttle opening and automatic braking after driver fatigue detection using the above method, is presented to avoid serious collisions and traffic accidents. The simulation and practical testing results demonstrate the feasibility of the vehicle active safety model.
A Hydrological Concept including Lateral Water Flow Compatible with the Biogeochemical Model ForSAFE
Directory of Open Access Journals (Sweden)
Giuliana Zanchi
2016-03-01
Full Text Available The study presents a hydrology concept developed to include lateral water flow in the biogeochemical model ForSAFE. The hydrology concept was evaluated against data collected at Svartberget in the Vindeln Research Forest in Northern Sweden. The results show that the new concept allows simulation of a saturated and an unsaturated zone in the soil as well as water flow that reaches the stream comparable to measurements. The most relevant differences compared to streamflow measurements are that the model simulates a higher base flow in winter and lower flow peaks after snowmelt. These differences are mainly caused by the assumptions made to regulate the percolation at the bottom of the simulated soil columns. The capability for simulating lateral flows and a saturated zone in ForSAFE can greatly improve the simulation of chemical exchange in the soil and export of elements from the soil to watercourses. Such a model can help improve the understanding of how environmental changes in the forest landscape will influence chemical loads to surface waters.
International Nuclear Information System (INIS)
Wang, Y. T.; Xu, L. X.; Gui, Y. X.
2010-01-01
In this paper, we investigate the integrated Sachs-Wolfe effect in the quintessence cold dark matter model with constant equation of state and constant speed of sound in dark energy rest frame, including dark energy perturbation and its anisotropic stress. Comparing with the ΛCDM model, we find that the integrated Sachs-Wolfe (ISW)-power spectrums are affected by different background evolutions and dark energy perturbation. As we change the speed of sound from 1 to 0 in the quintessence cold dark matter model with given state parameters, it is found that the inclusion of dark energy anisotropic stress makes the variation of magnitude of the ISW source uncertain due to the anticorrelation between the speed of sound and the ratio of dark energy density perturbation contrast to dark matter density perturbation contrast in the ISW-source term. Thus, the magnitude of the ISW-source term is governed by the competition between the alterant multiple of (1+3/2xc-circumflex s 2 ) and that of δ de /δ m with the variation of c-circumflex s 2 .
Expanded rock blast modeling capabilities of DMC{_}BLAST, including buffer blasting
Energy Technology Data Exchange (ETDEWEB)
Preece, D.S. [Sandia National Labs., Albuquerque, NM (United States); Tidman, J.P.; Chung, S.H. [ICI Explosives (Canada)
1996-12-31
A discrete element computer program named DMC{_}BLAST (Distinct Motion Code) has been under development since 1987 for modeling rock blasting. This program employs explicit time integration and uses spherical or cylindrical elements that are represented as circles in 2-D. DMC{_}BLAST calculations compare favorably with data from actual bench blasts. The blast modeling capabilities of DMC{_}BLAST have been expanded to include independently dipping geologic layers, top surface, bottom surface and pit floor. The pit can also now be defined using coordinates based on the toe of the bench. A method for modeling decked explosives has been developed which allows accurate treatment of the inert materials (stemming) in the explosive column and approximate treatment of different explosives in the same blasthole. A DMC{_}BLAST user can specify decking through a specific geologic layer with either inert material or a different explosive. Another new feature of DMC{_}BLAST is specification of an uplift angle which is the angle between the normal to the blasthole and a vector defining the direction of explosive loading on particles adjacent to the blasthole. A buffer (choke) blast capability has been added for situations where previously blasted material is adjacent to the free face of the bench preventing any significant lateral motion during the blast.
Directory of Open Access Journals (Sweden)
Carlo Bianchini
2016-06-01
Full Text Available It’s established that in the design and construc- tion of new buildings, BIM is a fundamental refe- rence especially when the standardization is the typical character of the project. As Architecture, with the management of the entire building pro- cess, requires standardization for greater eco- nomy, thanks to BIM tools the building process seems to have actually moved to a 2.0 phase; on the contrary, when BIM is applied to historical bu- ildings it still reveals not so adequate. In this framework, this paper will not discuss the differences between CAD and BIM or the un- doubted potential of BIM software from a tech- nical or operational standpoint; we would focus instead on the implication of BIM referring to the Representation disciplines and to the issues con- nected with its application to the existing built stock and especially to historic buildings.
Modelling and control of a microgrid including photovoltaic and wind generation
Hussain, Mohammed Touseef
Extensive increase of distributed generation (DG) penetration and the existence of multiple DG units at distribution level have introduced the notion of micro-grid. This thesis develops a detailed non-linear and small-signal dynamic model of a microgrid that includes PV, wind and conventional small scale generation along with their power electronics interfaces and the filters. The models developed evaluate the amount of generation mix from various DGs for satisfactory steady state operation of the microgrid. In order to understand the interaction of the DGs on microgrid system initially two simpler configurations were considered. The first one consists of microalternator, PV and their electronics, and the second system consists of microalternator and wind system each connected to the power system grid. Nonlinear and linear state space model of each microgrid are developed. Small signal analysis showed that the large participation of PV/wind can drive the microgrid to the brink of unstable region without adequate control. Non-linear simulations are carried out to verify the results obtained through small-signal analysis. The role of the extent of generation mix of a composite microgrid consisting of wind, PV and conventional generation was investigated next. The findings of the smaller systems were verified through nonlinear and small signal modeling. A central supervisory capacitor energy storage controller interfaced through a STATCOM was proposed to monitor and enhance the microgrid operation. The potential of various control inputs to provide additional damping to the system has been evaluated through decomposition techniques. The signals identified to have damping contents were employed to design the supervisory control system. The controller gains were tuned through an optimal pole placement technique. Simulation studies demonstrate that the STATCOM voltage phase angle and PV inverter phase angle were the best inputs for enhanced stability boundaries.
SEP-induced activity and its thermographic cortical representation in a murine model.
Hoffmann, Klaus-Peter; Ruff, Roman; Kirsch, Matthias
2013-06-01
This article is a methodical report on the generation of reproducible changes in brain activity in a murine model. Somatosensory evoked potentials (SEP) are used to generate synchronized cortical activity. After electrical stimulation of mice forelimbs, the potentials were recorded with a flexible thin-film polyimide electrode structure directly from the cortex. Every registration included a simultaneous recording from both hemispheres that repeated four times to reproduce and compare the results. The SEPs in the murine model were shown to generate a very stable signal. The latency of the second positive wave (P2 wave) ranged between 16 and 19 ms, and the N1-P2 amplitude ranged between 39 and 48 µV. In addition, the temperature distribution of the cortex was acquired using infrared thermography. Surface cortical temperature changed during electrical stimulation without a clear hemispheric correlation. These initial results could be a step toward a better understanding of the different synchronized cortical activities and basic methods of evaluation of various mathematical algorithms to detect them.
Moreno, Pablo M.
2011-05-19
We present in this paper a new three-dimensional (3-D) model for bed-load sediment transport, based on a Lagrangian description. We analyze generalized sub-models for the velocities after collision and the representation of the bed-roughness. The free-flight sub-model includes the effect of several forces, such as buoyancy, drag, virtual mass, lift, Basset and Magnus, and also addresses the particle rotation. A recent methodology for saving computational time in the Basset force is also employed. The sub-models for the post-collision velocity and rotation are based on the conservation of linear and angular momentum during the collision with the bed. We develop a new 3-D representation for the bed roughness by using geometric considerations. In order to address the interaction of particles with the turbulent flow, we tracked the particles through a computed turbulent velocity field for a smooth flat plate. This velocity field was used as a surrogate of the 3-D turbulent conditions close to the bed in streams. We first checked that the basic turbulence statistics for this velocity field could be used to approximate those in an open-channel flow. We then analyzed the interaction of the sediment and the turbulence for a single and multiple particles. We compared numerical results with experimental data obtained by Niño and García (1998b). We show that model predictions are in good agreement with existing data, in the sand size range. © 2011 ASCE.
Directory of Open Access Journals (Sweden)
Ian eFuelscher
2016-02-01
Full Text Available We investigated the purported association between developmental changes in grip selection planning and improvements in an individual’s capacity to represent action at an internal level (i.e., motor imagery. Participants were groups of healthy children aged 6-7 years and 8-12 years respectively, while a group of adolescents (13-17 years and adults (18-34 years allowed for consideration of childhood development in the broader context of motor maturation. A group of children aged 8-12 years with probable DCD (pDCD was included as a reference group for atypical motor development. Participants’ proficiency to generate and/or engage internal action representations was inferred from performance on the hand rotation task, a well-validated measure of motor imagery. A grip selection task designed to elicit the end-state comfort (ESC effect provided a window into the integrity of grip selection planning. Consistent with earlier accounts, the efficiency of grip selection planning followed a non-linear developmental progression in neurotypical individuals. As expected, analysis confirmed that these developmental improvements were predicted by an increased capacity to generate and/or engage internal action representations. The profile of this association remained stable throughout the (typical developmental spectrum. These findings are consistent with computational accounts of action planning that argue that internal action representations are associated with the expression and development of grip selection planning across typical development. However, no such association was found for our sample of children with pDCD, suggesting that individuals with atypical motor skill may adopt an alternative, sub-optimal strategy to plan their grip selection compared to their same-age control peers.
Energy Technology Data Exchange (ETDEWEB)
Mitchell, David L. [Desert Research Institute, Reno, NV (United States)
2013-09-05
used at all latitudes, while in the second simulation (Run 2), the D_{e}-T relationship for heterogeneous nucleation is used at all latitudes. For both runs, V_{m} is calculated from D_{e}. Two GCMs were used; the Community Atmosphere Model version 5 (CAM5) and a European GCM known as ECHAM5 (thanks to our European colleagues who collaborated with us). Similar results were obtained from both GCMs in the Northern Hemisphere mid-latitudes, with a net cooling of ~ 1.0 W m^{-2} due to heterogeneous nucleation, relative to Run 1. The mean global net cooling was 2.4 W m^{-2} for the ECHAM5 GCM while CAM5 produced a mean global net cooling of about 0.8 W m^{-2}. This dependence of the radiation balance on nucleation mode is substantial when one considers the direct radiative forcing from a CO_{2} doubling is 4 W m^{-2}. The differences between GCMs in mean global net cooling estimates may demonstrate a need for improving the representation of cirrus clouds in GCMs, including the coupling between microphysical and radiative properties. Unfortunately, after completing this GCM experiment, we learned from the company that provided the 2D-S microphysical data that the data was corrupted due to a computer program coding problem. Therefore the microphysical data had to be reprocessed and reanalyzed, and the GCM experiments were redone under our current ASR project but using an improved experimental design.
Energy Technology Data Exchange (ETDEWEB)
Chen, Lingen; Kan, Xuxian; Sun, Fengrui; Wu, Feng [College of Naval Architecture and Power, Naval University of Engineering, Wuhan 430033 (China)
2013-07-01
The operation of a universal steady flow endoreversible refrigeration cycle model consisting of a constant thermal-capacity heating branch, two constant thermal-capacity cooling branches and two adiabatic branches is viewed as a production process with exergy as its output. The finite time exergoeconomic performance optimization of the refrigeration cycle is investigated by taking profit rate optimization criterion as the objective. The relations between the profit rate and the temperature ratio of working fluid, between the COP (coefficient of performance) and the temperature ratio of working fluid, as well as the optimal relation between profit rate and the COP of the cycle are derived. The focus of this paper is to search the compromised optimization between economics (profit rate) and the utilization factor (COP) for endoreversible refrigeration cycles, by searching the optimum COP at maximum profit, which is termed as the finite-time exergoeconomic performance bound. Moreover, performance analysis and optimization of the model are carried out in order to investigate the effect of cycle process on the performance of the cycles using numerical example. The results obtained herein include the performance characteristics of endoreversible Carnot, Diesel, Otto, Atkinson, Dual and Brayton refrigeration cycles.
Onishi, Janet C; Park, Joong-Wook; Prado, Julio; Eades, Susan C; Mirza, Mustajab H; Fugaro, Michael N; Häggblom, Max M; Reinemeyer, Craig R
2012-10-12
Carbohydrate overload models of equine acute laminitis are used to study the development of lameness. It is hypothesized that a diet-induced shift in cecal bacterial communities contributes to the development of the pro-inflammatory state that progresses to laminar failure. It is proposed that vasoactive amines, protease activators and endotoxin, all bacterial derived bioactive metabolites, play a role in disease development. Questions regarding the oral bioavailability of many of the bacterial derived bioactive metabolites remain. This study evaluates the possibility that a carbohydrate-induced overgrowth of potentially pathogenic cecal bacteria occurs and that bacterial translocation contributes toward the development of the pro-inflammatory state. Two groups of mixed-breed horses were used, those with laminitis induced by cornstarch (n=6) or oligofructan (n=6) and non-laminitic controls (n=8). Cecal fluid and tissue homogenates of extra-intestinal sites including the laminae were used to enumerate Gram-negative and -positive bacteria. Horses that developed Obel grade2 lameness, revealed a significant overgrowth of potentially pathogenic Gram-positive and Gram-negative intestinal bacteria within the cecal fluid. Although colonization of extra-intestinal sites with potentially pathogenic bacteria was not detected, results of this study indicate that cecal/colonic lymphadenopathy and eosinophilia develop in horses progressing to lameness. It is hypothesized that the pro-inflammatory state in carbohydrate overload models of equine acute laminitis is driven by an immune response to the rapid overgrowth of Gram-positive and Gram-negative cecal bacterial communities in the gut. Further equine research is indicated to study the immunological response, involving the lymphatic system that develops in the model. Copyright © 2012 Elsevier B.V. All rights reserved.
Energy Technology Data Exchange (ETDEWEB)
Mishra, Umakant; Drewniak, Beth; Jastrow, Julie D.; Matamala, Roser M.; Vitharana, U. W. A.
2017-08-01
Soil properties such as soil organic carbon (SOC) stocks and active-layer thickness are used in earth system models (F.SMs) to predict anthropogenic and climatic impacts on soil carbon dynamics, future changes in atmospheric greenhouse gas concentrations, and associated climate changes in the permafrost regions. Accurate representation of spatial and vertical distribution of these soil properties in ESMs is a prerequisite for redudng existing uncertainty in predicting carbon-climate feedbacks. We compared the spatial representation of SOC stocks and active-layer thicknesses predicted by the coupled Modellntercomparison Project Phase 5 { CMIP5) ESMs with those predicted from geospatial predictions, based on observation data for the state of Alaska, USA. For the geospatial modeling. we used soil profile observations {585 for SOC stocks and 153 for active-layer thickness) and environmental variables (climate, topography, land cover, and surficial geology types) and generated fine-resolution (50-m spatial resolution) predictions of SOC stocks (to 1-m depth) and active-layer thickness across Alaska. We found large inter-quartile range (2.5-5.5 m) in predicted active-layer thickness of CMIP5 modeled results and small inter-quartile range (11.5-22 kg m-2) in predicted SOC stocks. The spatial coefficient of variability of active-layer thickness and SOC stocks were lower in CMIP5 predictions compared to our geospatial estimates when gridded at similar spatial resolutions (24.7 compared to 30% and 29 compared to 38%, respectively). However, prediction errors. when calculated for independent validation sites, were several times larger in ESM predictions compared to geospatial predictions. Primaly factors leading to observed differences were ( 1) lack of spatial heterogeneity in ESM predictions, (2) differences in assumptions concerning environmental controls, and (3) the absence of pedogenic processes in ESM model structures. Our results suggest that efforts to incorporate
CFD simulations and reduced order modeling of a refrigerator compartment including radiation effects
International Nuclear Information System (INIS)
Bayer, Ozgur; Oskay, Ruknettin; Paksoy, Akin; Aradag, Selin
2013-01-01
Highlights: ► Free convection in a refrigerator is simulated including radiation effects. ► Heat rates are affected drastically when radiation effects are considered. ► 95% of the flow energy can be represented by using one spatial POD mode. - Abstract: Considering the engineering problem of natural convection in domestic refrigerator applications, this study aims to simulate the fluid flow and temperature distribution in a single commercial refrigerator compartment by using the experimentally determined temperature values as the specified constant wall temperature boundary conditions. The free convection in refrigerator applications is evaluated as a three-dimensional (3D), turbulent, transient and coupled non-linear flow problem. Radiation heat transfer mode is also included in the analysis. According to the results, taking radiation effects into consideration does not change the temperature distribution inside the refrigerator significantly; however the heat rates are affected drastically. The flow inside the compartment is further analyzed with a reduced order modeling method called Proper Orthogonal Decomposition (POD) and the energy contents of several spatial and temporal modes that exist in the flow are examined. The results show that approximately 95% of all the flow energy can be represented by only using one spatial mode
Revilla, Marta; Galán, Berta; Viguri, Javier R
2016-07-01
An integrated mathematical model is proposed for modelling a moving bed biofilm reactor (MBBR) for removal of chemical oxygen demand (COD) under aerobic conditions. The composite model combines the following: (i) a one-dimensional biofilm model, (ii) a bulk liquid model, and (iii) biological processes in the bulk liquid and biofilm considering the interactions among autotrophic, heterotrophic and predator microorganisms. Depending on the values for the soluble biodegradable COD loading rate (SCLR), the model takes into account a) the hydrolysis of slowly biodegradable compounds in the bulk liquid, and b) the growth of predator microorganisms in the bulk liquid and in the biofilm. The integration of the model and the SCLR allows a general description of the behaviour of COD removal by the MBBR under various conditions. The model is applied for two in-series MBBR wastewater plant from an integrated cellulose and viscose production and accurately describes the experimental concentrations of COD, total suspended solids (TSS), nitrogen and phosphorous obtained during 14 months working at different SCLRs and nutrient dosages. The representation of the microorganism group distribution in the biofilm and in the bulk liquid allow for verification of the presence of predator microorganisms in the second reactor under some operational conditions. Copyright © 2016 Elsevier Ltd. All rights reserved.
Wilk, Szymon; Michalowski, Martin; Michalowski, Wojtek; Farion, Ken; Lin, Di; Hing, Marisela Mainegra; Mohapatra, Subhra
2013-01-01
Managing a patient with comorbid diseases according to multiple clinical practice guidelines (CPGs) may result in adverse interactions that need to be mitigated (identified and addressed) so a safe therapy can be devised. However, mitigation poses both clinical and methodological challenges. It requires extensive domain knowledge and calls for advanced CPG models and efficient algorithms to process them. We respond to the above challenges by describing our algorithm that mitigates interactions between pairs of CPGs. The algorithm creates logical models of analyzed CPGs and uses constraint logic programming (CLP) together with domain knowledge, codified as interaction and revision operators, to process them. Logical CPG models are transformed into CLP-CPG models that are solved to find a safe therapy. We represent these CLP-CPG models using MiniZinc, a standard language for CLP models. As motivation and illustration of our mitigation algorithm we use a clinical case study describing a patient managed for hypertension and deep vein thrombosis according to two individual CPGs. We apply the algorithm to this scenario and present MiniZinc representations of the constructed CLP-CPG models.
Schmuker, Michael; Yamagata, Nobuhiro; Nawrot, Martin Paul; Menzel, Randolf
2011-01-01
The honeybee Apis mellifera has a remarkable ability to detect and locate food sources during foraging, and to associate odor cues with food rewards. In the honeybee's olfactory system, sensory input is first processed in the antennal lobe (AL) network. Uniglomerular projection neurons (PNs) convey the sensory code from the AL to higher brain regions via two parallel but anatomically distinct pathways, the lateral and the medial antenno-cerebral tract (l- and m-ACT). Neurons innervating either tract show characteristic differences in odor selectivity, concentration dependence, and representation of mixtures. It is still unknown how this differential stimulus representation is achieved within the AL network. In this contribution, we use a computational network model to demonstrate that the experimentally observed features of odor coding in PNs can be reproduced by varying lateral inhibition and gain control in an otherwise unchanged AL network. We show that odor coding in the l-ACT supports detection and accurate identification of weak odor traces at the expense of concentration sensitivity, while odor coding in the m-ACT provides the basis for the computation and following of concentration gradients but provides weaker discrimination power. Both coding strategies are mutually exclusive, which creates a tradeoff between detection accuracy and sensitivity. The development of two parallel systems may thus reflect an evolutionary solution to this problem that enables honeybees to achieve both tasks during bee foraging in their natural environment, and which could inspire the development of artificial chemosensory devices for odor-guided navigation in robots.
Directory of Open Access Journals (Sweden)
Kamil A. Grajski
2016-07-01
Full Text Available Mechanisms underlying the emergence and plasticity of representational discontinuities in the mammalian primary somatosensory cortical representation of the hand are investigated in a computational model. The model consists of an input lattice organized as a three-digit hand forward-connected to a lattice of cortical columns each of which contains a paired excitatory and inhibitory cell. Excitatory and inhibitory synaptic plasticity of feedforward and lateral connection weights is implemented as a simple covariance rule and competitive normalization. Receptive field properties are computed independently for excitatory and inhibitory cells and compared within and across columns. Within digit representational zones intracolumnar excitatory and inhibitory receptive field extents are concentric, single-digit, small, and unimodal. Exclusively in representational boundary-adjacent zones, intracolumnar excitatory and inhibitory receptive field properties diverge: excitatory cell receptive fields are single-digit, small, and unimodal; and the paired inhibitory cell receptive fields are bimodal, double-digit, and large. In simulated syndactyly (webbed fingers, boundary-adjacent intracolumnar receptive field properties reorganize to within-representation type; divergent properties are reacquired following syndactyly release. This study generates testable hypotheses for assessment of cortical laminar-dependent receptive field properties and plasticity within and between cortical representational zones. For computational studies, present results suggest that concurrent excitatory and inhibitory plasticity may underlie novel emergent properties.
Jaramillo, Hector E; Gómez, Lessby; García, Jose J
2015-01-01
With the aim to study disc degeneration and the risk of injury during occupational activities, a new finite element (FE) model of the L4-L5-S1 segment of the human spine was developed based on the anthropometry of a typical Colombian worker. Beginning with medical images, the programs CATIA and SOLIDWORKS were used to generate and assemble the vertebrae and create the soft structures of the segment. The software ABAQUS was used to run the analyses, which included a detailed model calibration using the experimental step-wise reduction data for the L4-L5 component, while the L5-S1 segment was calibrated in the intact condition. The range of motion curves, the intradiscal pressure and the lateral bulging under pure moments were considered for the calibration. As opposed to other FE models that include the L5-S1 disc, the model developed in this study considered the regional variations and anisotropy of the annulus as well as a realistic description of the nucleus geometry, which allowed an improved representation of experimental data during the validation process. Hence, the model can be used to analyze the stress and strain distributions in the L4-L5 and L5-S1 discs of workers performing activities such as lifting and carrying tasks.
An introduction to group representation theory
Keown, R D M
1975-01-01
In this book, we study theoretical and practical aspects of computing methods for mathematical modelling of nonlinear systems. A number of computing techniques are considered, such as methods of operator approximation with any given accuracy; operator interpolation techniques including a non-Lagrange interpolation; methods of system representation subject to constraints associated with concepts of causality, memory and stationarity; methods of system representation with an accuracy that is the best within a given class of models; methods of covariance matrix estimation;methods for low-rank mat
Yager, R.M.; Voss, C.I.; Southworth, S.
2009-01-01
A numerical representation that explicitly represents the generalized three-dimensional anisotropy of folded fractured-sedimentary rocks in a groundwater model best reproduces the salient features of the flow system in the Shenandoah Valley, USA. This conclusion results from a comparison of four alternative representations of anisotropy in which the hydraulic-conductivity tensor represents the bedrock structure as (model A) anisotropic with variable strikes and dips, (model B) horizontally anisotropic with a uniform strike, (model C) horizontally anisotropic with variable strikes, and (model D) isotropic. Simulations using the US Geological Survey groundwater flow and transport model SUTRA are based on a representation of hydraulic conductivity that conforms to bedding planes in a three-dimensional structural model of the valley that duplicates the pattern of folded sedimentary rocks. In the most general representation, (model A), the directions of maximum and medium hydraulic conductivity conform to the strike and dip of bedding, respectively, while the minimum hydraulic-conductivity direction is perpendicular to bedding. Model A produced a physically realistic flow system that reflects the underlying bedrock structure, with a flow field that is significantly different from those produced by the other three models. ?? Springer-Verlag 2009.
Hydrological processes and model representation: impact of soft data on calibration
J.G. Arnold; M.A. Youssef; H. Yen; M.J. White; A.Y. Sheshukov; A.M. Sadeghi; D.N. Moriasi; J.L. Steiner; Devendra Amatya; R.W. Skaggs; E.B. Haney; J. Jeong; M. Arabi; P.H. Gowda
2015-01-01
Hydrologic and water quality models are increasingly used to determine the environmental impacts of climate variability and land management. Due to differing model objectives and differences in monitored data, there are currently no universally accepted procedures for model calibration and validation in the literature. In an effort to develop accepted model calibration...
International Nuclear Information System (INIS)
Gao, Xiankun; Cui, Yan; Hu, Jianjun; Xu, Guangyin; Yu, Yongchang
2016-01-01
Highlights: • Lambert W-function based exact representation (LBER) is presented for double diode model (DDM). • Fitness difference between LBER and DDM is verified by reported parameter values. • The proposed LBER can better represent the I–V and P–V characteristics of solar cells. • Parameter extraction difference between LBER and DDM is validated by two algorithms. • The parameter values extracted from LBER are more accurate than those from DDM. - Abstract: Accurate modeling and parameter extraction of solar cells play an important role in the simulation and optimization of PV systems. This paper presents a Lambert W-function based exact representation (LBER) for traditional double diode model (DDM) of solar cells, and then compares their fitness and parameter extraction performance. Unlike existing works, the proposed LBER is rigorously derived from DDM, and in LBER the coefficients of Lambert W-function are not extra parameters to be extracted or arbitrary scalars but the vectors of terminal voltage and current of solar cells. The fitness difference between LBER and DDM is objectively validated by the reported parameter values and experimental I–V data of a solar cell and four solar modules from different technologies. The comparison results indicate that under the same parameter values, the proposed LBER can better represent the I–V and P–V characteristics of solar cells and provide a closer representation to actual maximum power points of all module types. Two different algorithms are used to compare the parameter extraction performance of LBER and DDM. One is our restart-based bound constrained Nelder-Mead (rbcNM) algorithm implemented in Matlab, and the other is the reported R cr -IJADE algorithm executed in Visual Studio. The comparison results reveal that, the parameter values extracted from LBER using two algorithms are always more accurate and robust than those from DDM despite more time consuming. As an improved version of DDM, the
Soares, Pedro M. M.; Cardoso, Rita M.; Miranda, Pedro M. A.; Viterbo, Pedro; Belo-Pereira, Margarida
2012-04-01
A new data set of daily gridded observations of precipitation, computed from over 400 stations in Portugal, is used to assess the performance of 12 regional climate models at 25 km resolution, from the ENSEMBLES set, all forced by ERA-40 boundary conditions, for the 1961-2000 period. Standard point error statistics, calculated from grid point and basin aggregated data, and precipitation related climate indices are used to analyze the performance of the different models in representing the main spatial and temporal features of the regional climate, and its extreme events. As a whole, the ENSEMBLES models are found to achieve a good representation of those features, with good spatial correlations with observations. There is a small but relevant negative bias in precipitation, especially in the driest months, leading to systematic errors in related climate indices. The underprediction of precipitation occurs in most percentiles, although this deficiency is partially corrected at the basin level. Interestingly, some of the conclusions concerning the performance of the models are different of what has been found for the contiguous territory of Spain; in particular, ENSEMBLES models appear too dry over Portugal and too wet over Spain. Finally, models behave quite differently in the simulation of some important aspects of local climate, from the mean climatology to high precipitation regimes in localized mountain ranges and in the subsequent drier regions.
de Smet, J.H.
1999-01-01
This thesis elaborates on the evolution of the continental upper mantle based on numerical modelling results. The descriptive and explanatory basis is formed by a numerical thermo-chemical convection model. The model evolution starts in the early Archaean about 4 billion years ago. The model follows
Smet, J.H. de
1999-01-01
This thesis elaborates on the evolution of the continental upper mantle based on numerical modelling results. The descriptive and explanatory basis is formed by a numerical thermo-chemical convection model. The model evolution starts in the early Archaean about 4 billion years ago. The model
Höning, D.; Spohn, T.
2014-12-01
By harvesting solar energy and converting it to chemical energy, photosynthetic life plays an important role in the energy budget of Earth [2]. This leads to alterations of chemical reservoirs eventually affecting the Earth's interior [4]. It further has been speculated [3] that the formation of continents may be a consequence of the evolution life. A steady state model [1] suggests that the Earth without its biosphere would evolve to a steady state with a smaller continent coverage and a dryer mantle than is observed today. We present a model including (i) parameterized thermal evolution, (ii) continental growth and destruction, and (iii) mantle water regassing and outgassing. The biosphere enhances the production rate of sediments which eventually are subducted. These sediments are assumed to (i) carry water to depth bound in stable mineral phases and (ii) have the potential to suppress shallow dewatering of the underlying sediments and crust due to their low permeability. We run a Monte Carlo simulation for various initial conditions and treat all those parameter combinations as success which result in the fraction of continental crust coverage observed for present day Earth. Finally, we simulate the evolution of an abiotic Earth using the same set of parameters but a reduced rate of continental weathering and erosion. Our results suggest that the origin and evolution of life could have stabilized the large continental surface area of the Earth and its wet mantle, leading to the relatively low mantle viscosity we observe at present. Without photosynthetic life on our planet, the Earth would be geodynamical less active due to a dryer mantle, and would have a smaller fraction of continental coverage than observed today. References[1] Höning, D., Hansen-Goos, H., Airo, A., Spohn, T., 2014. Biotic vs. abiotic Earth: A model for mantle hydration and continental coverage. Planetary and Space Science 98, 5-13. [2] Kleidon, A., 2010. Life, hierarchy, and the
Cognitive/emotional models for human behavior representation in 3D avatar simulations
Peterson, James K.
2004-08-01
Simplified models of human cognition and emotional response are presented which are based on models of auditory/ visual polymodal fusion. At the core of these models is a computational model of Area 37 of the temporal cortex which is based on new isocortex models presented recently by Grossberg. These models are trained using carefully chosen auditory (musical sequences), visual (paintings) and higher level abstract (meta level) data obtained from studies of how optimization strategies are chosen in response to outside managerial inputs. The software modules developed are then used as inputs to character generation codes in standard 3D virtual world simulations. The auditory and visual training data also enable the development of simple music and painting composition generators which significantly enhance one's ability to validate the cognitive model. The cognitive models are handled as interacting software agents implemented as CORBA objects to allow the use of multiple language coding choices (C++, Java, Python etc) and efficient use of legacy code.
DEFF Research Database (Denmark)
to the enterprises of the medium. This is the subject of Representational Machines: How photography enlists the workings of institutional technologies in search of establishing new iconic and social spaces. Together, the contributions to this edited volume span historical epochs, social environments, technological...
Kleiman, Glenn M.; Humphrey, Mary M.
While studies of college-level readers have yielded evidence both for and against the use of phonological or speech recoding in the recognition of written words, no consistent picture of when recoding occurs has yet emerged. However, one model, the adjunct access model, can account for the previous research findings. According to this model,…
An object-oriented forest landscape model and its representation of tree species
Hong S. He; David J. Mladenoff; Joel Boeder
1999-01-01
LANDIS is a forest landscape model that simulates the interaction of large landscape processes and forest successional dynamics at tree species level. We discuss how object-oriented design (OOD) approaches such as modularity, abstraction and encapsulation are integrated into the design of LANDIS. We show that using OOD approaches, model decisions (olden as model...
An Analysis of the Educational Value of Low-Fidelity Anatomy Models as External Representations
Chan, Lap Ki; Cheng, Maurice M. W.
2011-01-01
Although high-fidelity digital models of human anatomy based on actual cross-sectional images of the human body have been developed, reports on the use of physical models in anatomy teaching continue to appear. This article aims to examine the common features shared by these physical models and analyze their educational value based on the…
Tangible Models and Haptic Representations Aid Learning of Molecular Biology Concepts
Johannes, Kristen; Powers, Jacklyn; Couper, Lisa; Silberglitt, Matt; Davenport, Jodi
2016-01-01
Can novel 3D models help students develop a deeper understanding of core concepts in molecular biology? We adapted 3D molecular models, developed by scientists, for use in high school science classrooms. The models accurately represent the structural and functional properties of complex DNA and Virus molecules, and provide visual and haptic…
Lu, Wei; Yang, Qingchun; Martín, Jordi D.; Juncosa, Ricardo
2013-04-01
During the 1990s, groundwater overexploitation has resulted in seawater intrusion in the coastal aquifer of the Shenzhen city, China. Although water supply facilities have been improved and alleviated seawater intrusion in recent years, groundwater overexploitation is still of great concern in some local areas. In this work we present a three-dimensional density-dependent numerical model developed with the FEFLOW code, which is aimed at simulating the extent of seawater intrusion while including tidal effects and different groundwater pumping scenarios. Model calibration, using waterheads and reported chloride concentration, has been performed based on the data from 14 boreholes, which were monitored from May 2008 to December 2009. A fairly good fitness between the observed and computed values was obtained by a manual trial-and-error method. Model prediction has been carried out forward 3 years with the calibrated model taking into account high, medium and low tide levels and different groundwater exploitation schemes. The model results show that tide-induced seawater intrusion significantly affects the groundwater levels and concentrations near the estuarine of the Dasha river, which implies that an important hydraulic connection exists between this river and groundwater, even considering that some anti-seepage measures were taken in the river bed. Two pumping scenarios were considered in the calibrated model in order to predict the future changes in the water levels and chloride concentration. The numerical results reveal a decreased tendency of seawater intrusion if groundwater exploitation does not reach an upper bound of about 1.32 × 104 m3/d. The model results provide also insights for controlling seawater intrusion in such coastal aquifer systems.
Representation of precipitation is one of the most difficult aspects of modeling post-fire runoff and erosion and also one of the most sensitive input parameters to rainfall-runoff models. The impact of post-fire convective rainstorms, especially in semi-arid watersheds, depends on the overlap betwe...
Berry phase in Heisenberg representation
Andreev, V. A.; Klimov, Andrei B.; Lerner, Peter B.
1994-01-01
We define the Berry phase for the Heisenberg operators. This definition is motivated by the calculation of the phase shifts by different techniques. These techniques are: the solution of the Heisenberg equations of motion, the solution of the Schrodinger equation in coherent-state representation, and the direct computation of the evolution operator. Our definition of the Berry phase in the Heisenberg representation is consistent with the underlying supersymmetry of the model in the following sense. The structural blocks of the Hamiltonians of supersymmetrical quantum mechanics ('superpairs') are connected by transformations which conserve the similarity in structure of the energy levels of superpairs. These transformations include transformation of phase of the creation-annihilation operators, which are generated by adiabatic cyclic evolution of the parameters of the system.
Energy Technology Data Exchange (ETDEWEB)
Chenel, Aurélie; Mangaud, Etienne [Laboratoire de Chimie Physique, Bât 349, Université Paris-Sud, UMR 8000, F-91405 Orsay (France); Laboratoire Collisions, Agrégats, Réactivité, UMR 5589, IRSAMC, Université Paul Sabatier, F-31062 Toulouse (France); Burghardt, Irene, E-mail: michele.desouter-lecomte@u-psud.fr, E-mail: chris@irsamc.ups-tlse.fr, E-mail: burghardt@chemie.uni-frankfurt.de [Institut für Physikalische und Theoretische Chemie, Goethe Universität Frankfurt, Max-von-Laue-Str. 7, D-60438 Frankfurt am Main (Germany); Meier, Christoph, E-mail: michele.desouter-lecomte@u-psud.fr, E-mail: chris@irsamc.ups-tlse.fr, E-mail: burghardt@chemie.uni-frankfurt.de [Laboratoire Collisions, Agrégats, Réactivité, UMR 5589, IRSAMC, Université Paul Sabatier, F-31062 Toulouse (France); Desouter-Lecomte, Michèle, E-mail: michele.desouter-lecomte@u-psud.fr, E-mail: chris@irsamc.ups-tlse.fr, E-mail: burghardt@chemie.uni-frankfurt.de [Laboratoire de Chimie Physique, Bât 349, Université Paris-Sud, UMR 8000, F-91405 Orsay (France); Département de Chimie, Université de Liège, Sart Tilman, B6, B-4000 Liège (Belgium)
2014-01-28
Following the recent quantum dynamics investigation of the charge transfer at an oligothiophene-fullerene heterojunction by the multi-configuration time dependent Hartree method [H. Tamura, R. Martinazzo, M. Ruckenbauer and I. Burghardt, J. Chem. Phys. 137, 22A540 (2012)], we revisit the transfer process by a perturbative non-Markovian master equation treated by the time local auxiliary density matrix approach. We compare the efficiency of the spin-boson model calibrated by quantum chemistry with the effective mode representation. A collective mode is extracted from the spin-boson spectral density. It is weakly coupled to a residual bath of vibrational modes, allowing second-order dynamics. The electron transfer is analyzed for a sampling of inter-fragment distances showing the fine interplay of the electronic coupling and energy gap on the relaxation. The electronic coherence, expected to play a role in the process, is preserved during about 200 fs.
A Model for the representation of Speech Signals in Normal and Impaired Ears
DEFF Research Database (Denmark)
Christiansen, Thomas Ulrich
2004-01-01
hearing was modelled as a combination of outer- and inner hair cell loss. The percentage of dead inner hair cells was calculated based on a new computational method relating auditory nerve fibre thresholds to behavioural thresholds. Finally, a model of the entire auditory nerve fibre population......A model of human auditory periphery, ranging from the outer ear to the auditory nerve, was developed. The model consists of the following components: outer ear transfer function, middle ear transfer function, basilar membrane velocity, inner hair cell receptor potential, inner hair cell probability...... of neurotransmitter release and auditory nerve fibre refractoriness. The model builds on previously published models, however, parameters for basilar membrane velocity and inner hair cell probability of neurotransmitter release were successfully fitted to model data from psychophysical and physiological data...
Galeazzi, Juan M; Minini, Loredana; Stringer, Simon M
2015-01-01
Neurons that respond to visual targets in a hand-centered frame of reference have been found within various areas of the primate brain. We investigate how hand-centered visual representations may develop in a neural network model of the primate visual system called VisNet, when the model is trained on images of the hand seen against natural visual scenes. The simulations show how such neurons may develop through a biologically plausible process of unsupervised competitive learning and self-organization. In an advance on our previous work, the visual scenes consisted of multiple targets presented simultaneously with respect to the hand. Three experiments are presented. First, VisNet was trained with computerized images consisting of a realistic image of a hand and a variety of natural objects, presented in different textured backgrounds during training. The network was then tested with just one textured object near the hand in order to verify if the output cells were capable of building hand-centered representations with a single localized receptive field. We explain the underlying principles of the statistical decoupling that allows the output cells of the network to develop single localized receptive fields even when the network is trained with multiple objects. In a second simulation we examined how some of the cells with hand-centered receptive fields decreased their shape selectivity and started responding to a localized region of hand-centered space as the number of objects presented in overlapping locations during training increases. Lastly, we explored the same learning principles training the network with natural visual scenes collected by volunteers. These results provide an important step in showing how single, localized, hand-centered receptive fields could emerge under more ecologically realistic visual training conditions.
Directory of Open Access Journals (Sweden)
Juan Manuel Galeazzi
2015-12-01
Full Text Available Neurons that respond to visual targets in a hand-centred frame of reference have been found within various areas of the primate brain. We investigate how hand-centred visual representations may develop in a neural network model of the primate visual system called VisNet, when the model is trained on images of the hand seen against natural visual scenes. The simulations show how such neurons may develop through a biologically plausible process of unsupervised competitive learning and self-organisation. In an advance on our previous work, the visual scenes consisted of multiple targets presented simultaneously with respect to the hand. Three experiments are presented. First, VisNet was trained with computerized images consisting of a realistic image of a hand and and a variety of natural objects, presented in different textured backgrounds during training. The network was then tested with just one textured object near the hand in order to verify if the output cells were capable of building hand-centered representations with a single localised receptive field. We explain the underlying principles of the statistical decoupling that allows the output cells of the network to develop single localised receptive fields even when the network is trained with multiple objects. In a second simulation we examined how some of the cells with hand-centred receptive fields decreased their shape selectivity and started responding to a localised region of hand-centred space as the number of objects presented in overlapping locations during training increases. Lastly, we explored the same learning principles training the network with natural visual scenes collected by volunteers. These results provide an important step in showing how single, localised, hand-centered receptive fields could emerge under more ecologically realistic visual training conditions.
Exploring the Structure of Spatial Representations
Madl, Tamas; Franklin, Stan; Chen, Ke; Trappl, Robert; Montaldi, Daniela
2016-01-01
It has been suggested that the map-like representations that support human spatial memory are fragmented into sub-maps with local reference frames, rather than being unitary and global. However, the principles underlying the structure of these ‘cognitive maps’ are not well understood. We propose that the structure of the representations of navigation space arises from clustering within individual psychological spaces, i.e. from a process that groups together objects that are close in these spaces. Building on the ideas of representational geometry and similarity-based representations in cognitive science, we formulate methods for learning dissimilarity functions (metrics) characterizing participants’ psychological spaces. We show that these learned metrics, together with a probabilistic model of clustering based on the Bayesian cognition paradigm, allow prediction of participants’ cognitive map structures in advance. Apart from insights into spatial representation learning in human cognition, these methods could facilitate novel computational tools capable of using human-like spatial concepts. We also compare several features influencing spatial memory structure, including spatial distance, visual similarity and functional similarity, and report strong correlations between these dimensions and the grouping probability in participants’ spatial representations, providing further support for clustering in spatial memory. PMID:27347681
Exploring the Structure of Spatial Representations.
Madl, Tamas; Franklin, Stan; Chen, Ke; Trappl, Robert; Montaldi, Daniela
2016-01-01
It has been suggested that the map-like representations that support human spatial memory are fragmented into sub-maps with local reference frames, rather than being unitary and global. However, the principles underlying the structure of these 'cognitive maps' are not well understood. We propose that the structure of the representations of navigation space arises from clustering within individual psychological spaces, i.e. from a process that groups together objects that are close in these spaces. Building on the ideas of representational geometry and similarity-based representations in cognitive science, we formulate methods for learning dissimilarity functions (metrics) characterizing participants' psychological spaces. We show that these learned metrics, together with a probabilistic model of clustering based on the Bayesian cognition paradigm, allow prediction of participants' cognitive map structures in advance. Apart from insights into spatial representation learning in human cognition, these methods could facilitate novel computational tools capable of using human-like spatial concepts. We also compare several features influencing spatial memory structure, including spatial distance, visual similarity and functional similarity, and report strong correlations between these dimensions and the grouping probability in participants' spatial representations, providing further support for clustering in spatial memory.
Exploring the Structure of Spatial Representations.
Directory of Open Access Journals (Sweden)
Tamas Madl
Full Text Available It has been suggested that the map-like representations that support human spatial memory are fragmented into sub-maps with local reference frames, rather than being unitary and global. However, the principles underlying the structure of these 'cognitive maps' are not well understood. We propose that the structure of the representations of navigation space arises from clustering within individual psychological spaces, i.e. from a process that groups together objects that are close in these spaces. Building on the ideas of representational geometry and similarity-based representations in cognitive science, we formulate methods for learning dissimilarity functions (metrics characterizing participants' psychological spaces. We show that these learned metrics, together with a probabilistic model of clustering based on the Bayesian cognition paradigm, allow prediction of participants' cognitive map structures in advance. Apart from insights into spatial representation learning in human cognition, these methods could facilitate novel computational tools capable of using human-like spatial concepts. We also compare several features influencing spatial memory structure, including spatial distance, visual similarity and functional similarity, and report strong correlations between these dimensions and the grouping probability in participants' spatial representations, providing further support for clustering in spatial memory.
Modeling with a Conceptual Representation: Is It Necessary? Does It Work?
Directory of Open Access Journals (Sweden)
Rebecca C. Jordan
2017-04-01
Full Text Available In response to recent educational imperatives in the United States, modeling and systems thinking have been identified as being critical for science learning. In this paper, we investigate models in the classroom from two important perspectives: (1 from the teacher perspective to understand how teachers perceive models and use models in the classroom and (2 from the students perspective to understand how student use model-based reasoning to represent their understanding in a classroom setting. Qualitative data collected from 19 teachers who attended a professional development workshop in the northeastern United States indicate that while teachers see the value in teaching to think with models (i.e., during inquiry practices, they tend to use models mostly as communication tools in the classroom. Quantitative data collected about the modeling practices of 42 middle school students who worked collaboratively in small groups (4–5 students using a computer modeling program indicated that students tended to engage in more mechanistic and function-related thinking with time as they reasoned about a complex system. Furthermore, students had a typified trajectory of first adding and then next paring down ideas in their models. Implications for science education are discussed.
Including Overweight or Obese Students in Physical Education: A Social Ecological Constraint Model
Li, Weidong; Rukavina, Paul
2012-01-01
In this review, we propose a social ecological constraint model to study inclusion of overweight or obese students in physical education by integrating key concepts and assumptions from ecological constraint theory in motor development and social ecological models in health promotion and behavior. The social ecological constraint model proposes…
ETM documentation update – including modelling conventions and manual for software tools
DEFF Research Database (Denmark)
Grohnheit, Poul Erik
, it summarises the work done during 2013, and it also contains presentations for promotion of fusion as a future element in the electricity generation mix and presentations for the modelling community concerning model development and model documentation – in particular for TIAM collaboration workshops....
Directory of Open Access Journals (Sweden)
Yan Li
2016-02-01
Full Text Available Sparse climatic observations represent a major challenge for hydrological modeling of mountain catchments with implications for decision-making in water resources management. Employing elevation bands in the Soil and Water Assessment Tool-Sequential Uncertainty Fitting (SWAT2012-SUFI2 model enabled representation of precipitation and temperature variation with altitude in the Daning river catchment (Three Gorges Reservoir Region, China where meteorological inputs are limited in spatial extent and are derived from observations from relatively low lying locations. Inclusion of elevation bands produced better model performance for 1987–1993 with the Nash–Sutcliffe efficiency (NSE increasing by at least 0.11 prior to calibration. During calibration prediction uncertainty was greatly reduced. With similar R-factors from the earlier calibration iterations, a further 11% of observations were included within the 95% prediction uncertainty (95PPU compared to the model without elevation bands. For behavioral simulations defined in SWAT calibration using a NSE threshold of 0.3, an additional 3.9% of observations were within the 95PPU while the uncertainty reduced by 7.6% in the model with elevation bands. The calibrated model with elevation bands reproduced observed river discharges with the performance in the calibration period changing to “very good” from “poor” without elevation bands. The output uncertainty of calibrated model with elevation bands was satisfactory, having 85% of flow observations included within the 95PPU. These results clearly demonstrate the requirement to account for orographic effects on precipitation and temperature in hydrological models of mountainous catchments.
Tirado-Ramos, Alfredo; Hu, Jingkun; Lee, K P
2002-01-01
Supplement 23 to DICOM (Digital Imaging and Communications for Medicine), Structured Reporting, is a specification that supports a semantically rich representation of image and waveform content, enabling experts to share image and related patient information. DICOM SR supports the representation of textual and coded data linked to images and waveforms. Nevertheless, the medical information technology community needs models that work as bridges between the DICOM relational model and open object-oriented technologies. The authors assert that representations of the DICOM Structured Reporting standard, using object-oriented modeling languages such as the Unified Modeling Language, can provide a high-level reference view of the semantically rich framework of DICOM and its complex structures. They have produced an object-oriented model to represent the DICOM SR standard and have derived XML-exchangeable representations of this model using World Wide Web Consortium specifications. They expect the model to benefit developers and system architects who are interested in developing applications that are compliant with the DICOM SR specification.
Conchúir, Shane Ó.; Der, Bryan S.; Drew, Kevin; Kuroda, Daisuke; Xu, Jianqing; Weitzner, Brian D.; Renfrew, P. Douglas; Sripakdeevong, Parin; Borgo, Benjamin; Havranek, James J.; Kuhlman, Brian; Kortemme, Tanja; Bonneau, Richard; Gray, Jeffrey J.; Das, Rhiju
2013-01-01
The Rosetta molecular modeling software package provides experimentally tested and rapidly evolving tools for the 3D structure prediction and high-resolution design of proteins, nucleic acids, and a growing number of non-natural polymers. Despite its free availability to academic users and improving documentation, use of Rosetta has largely remained confined to developers and their immediate collaborators due to the code’s difficulty of use, the requirement for large computational resources, and the unavailability of servers for most of the Rosetta applications. Here, we present a unified web framework for Rosetta applications called ROSIE (Rosetta Online Server that Includes Everyone). ROSIE provides (a) a common user interface for Rosetta protocols, (b) a stable application programming interface for developers to add additional protocols, (c) a flexible back-end to allow leveraging of computer cluster resources shared by RosettaCommons member institutions, and (d) centralized administration by the RosettaCommons to ensure continuous maintenance. This paper describes the ROSIE server infrastructure, a step-by-step ‘serverification’ protocol for use by Rosetta developers, and the deployment of the first nine ROSIE applications by six separate developer teams: Docking, RNA de novo, ERRASER, Antibody, Sequence Tolerance, Supercharge, Beta peptide design, NCBB design, and VIP redesign. As illustrated by the number and diversity of these applications, ROSIE offers a general and speedy paradigm for serverification of Rosetta applications that incurs negligible cost to developers and lowers barriers to Rosetta use for the broader biological community. ROSIE is available at http://rosie.rosettacommons.org. PMID:23717507
Celaya, Jose R.; Saxen, Abhinav; Goebel, Kai
2012-01-01
This article discusses several aspects of uncertainty representation and management for model-based prognostics methodologies based on our experience with Kalman Filters when applied to prognostics for electronics components. In particular, it explores the implications of modeling remaining useful life prediction as a stochastic process and how it relates to uncertainty representation, management, and the role of prognostics in decision-making. A distinction between the interpretations of estimated remaining useful life probability density function and the true remaining useful life probability density function is explained and a cautionary argument is provided against mixing interpretations for the two while considering prognostics in making critical decisions.
Directory of Open Access Journals (Sweden)
Martin Gugat
2012-05-01
Full Text Available Compressible squeeze film damping is a phenomenon of great importance for micromachines. For example, for the optimal design of an electrostatically actuated micro-cantilever mass sensor that operates in air, it is essential to have a model for the system behavior that can be evaluated efficiently. An analytical model that is based upon a solution of the linearized Reynolds equation has been given by R.B. Darling. In this paper we explain how some infinite sums that appear in Darling’s model can be evaluated analytically. As an example of applications of these closed form representations, we compute an approximation for the critical frequency where the spring component of the reaction force on the microplate, due to the motion through the air, is equal to a certain given multiple of the damping component. We also show how some double series that appear in the model can be reduced to a single infinite series that can be approximated efficiently.
Assessing Argumentative Representation with Bayesian Network Models in Debatable Social Issues
Zhang, Zhidong; Lu, Jingyan
2014-01-01
This study seeks to obtain argumentation models, which represent argumentative processes and an assessment structure in secondary school debatable issues in the social sciences. The argumentation model was developed based on mixed methods, a combination of both theory-driven and data-driven methods. The coding system provided a combing point by…
A Land System representation for global assessments and land-use modeling
van Asselen, S.; Verburg, P.H.
2012-01-01
Current global scale land-change models used for integrated assessments and climate modeling are based on classifications of land cover. However, land-use management intensity and livestock keeping are also important aspects of land use, and are an integrated part of land systems. This article aims
Multi-dimensional digital human models for ergonomic analysis based on natural data representations
Moes, C.C.M.
2015-01-01
Digital human models are often used for ergonomic analysis of product designs, before physical prototypes are available. However, existing digital human models cannot be used to simultaneously: 1) consider the tissue loads and the physiological effects of the tissue loads; 2) optimise the product
A representation theory for a class of vector autoregressive models for fractional processes
DEFF Research Database (Denmark)
Johansen, Søren
2008-01-01
Based on an idea of Granger (1986), we analyze a new vector autoregressive model defined from the fractional lag operator 1-(1-L)^{d}. We first derive conditions in terms of the coefficients for the model to generate processes which are fractional of order zero. We then show that if there is a un...
Wang, Q. J.; Robertson, D. E.; Haines, C. L.
2009-02-01
Irrigation is important to many agricultural businesses but also has implications for catchment health. A considerable body of knowledge exists on how irrigation management affects farm business and catchment health. However, this knowledge is fragmentary; is available in many forms such as qualitative and quantitative; is dispersed in scientific literature, technical reports, and the minds of individuals; and is of varying degrees of certainty. Bayesian networks allow the integration of dispersed knowledge into quantitative systems models. This study describes the development, validation, and application of a Bayesian network model of farm irrigation in the Shepparton Irrigation Region of northern Victoria, Australia. In this first paper we describe the process used to integrate a range of sources of knowledge to develop a model of farm irrigation. We describe the principal model components and summarize the reaction to the model and its development process by local stakeholders. Subsequent papers in this series describe model validation and the application of the model to assess the regional impact of historical and future management intervention.
Joos, Fortunat; Bruno, Michele; Fink, Roger; Siegenthaler, Ulrich; Stocker, Thomas F.; Le Quéré, Corinne; Sarmiento, Jorge L.
1996-07-01
Establishing the link between atmospheric CO2 concentration and anthropogenic carbon emissions requires the development of complex carbon cycle models of the primary sinks, the ocean and terrestrial biosphere. Once such models have been developed, the potential exists to use pulse response functions to characterize their behaviour. However, the application of response functions based on a pulse increase in atmospheric CO2 to characterize oceanic uptake, the conventional technique, does not yield a very accurate result due to nonlinearities in the aquatic carbon chemistry. Here, we propose the use of an ocean mixed-layer pulse response function that characterizes the surface to deep ocean mixing in combination with a separate equation describing air-sea exchange. The use of a mixed-layer pulse response function avoids the problem arising from the nonlinearities of the carbon chemistry and gives therefore more accurate results. The response function is also valid for tracers other than carbon. We found that tracer uptake of the HILDA and Box-Diffusion model can be represented exactly by the new method. For the Princeton 3-D model, we find that the agreement between the complete model and its pulse substitute is better than 4% for the cumulative uptake of anthropogenic carbon for the period 1765 2300 applying the IPCC stabilization scenarios S450 and S750 and better than 2% for the simulated inventory and surface concentration of bomb-produced radiocarbon. By contrast, the use of atmospheric response functions gives deviations up to 73% for the cumulative CO2 uptake as calculated with the Princeton 3-D model. We introduce the use of a decay response function for calculating the potential carbon storage on land as a substitute for terrestrial biosphere models that describe the overturning of assimilated carbon. This, in combination with an equation describing the net primary productivity permits us to exactly characterize simple biosphere models. As the time scales of
DEFF Research Database (Denmark)
Petersson, Dag; Dahlgren, Anna; Vestberg, Nina Lager
Photography not only represents space. Space is produced photographically. Since its inception in the 19th century, photography has brought to light a vast array of represented subjects. Always situated in some spatial order, photographic representations have been operatively underpinned by social...... to the enterprises of the medium. This is the subject of Representational Machines: How photography enlists the workings of institutional technologies in search of establishing new iconic and social spaces. Together, the contributions to this edited volume span historical epochs, social environments, technological......, technical, and institutional mechanisms. Geographically, bodily, and geometrically, the camera has positioned its subjects in social structures and hierarchies, in recognizable localities, and in iconic depth constructions which, although they show remarkable variation, nevertheless belong specifically...
Personality and Cultural Modeling for Agent-Based Representation of a Terrorist Cell, Phase 1
National Research Council Canada - National Science Library
Hogan, C. M; Van Houten, Robert A; La, Nini
2003-01-01
This report describes the research into the use of personality, cultural and socio-political modeling in order to provide a robust asymmetric opponent for Military Operation in Urban Terrain training...
National Aeronautics and Space Administration — This article discusses several aspects of uncertainty represen- tation and management for model-based prognostics method- ologies based on our experience with Kalman...
Generic process model structures: towards a standard notation for abstract representations
CSIR Research Space (South Africa)
Van Der Merwe, A
2007-10-01
Full Text Available The identification of process model structures is usually complex and costly. If these structures can be reused across boundaries, this could not only benefit the internal structure of one application domain, but could also benefit organizations...
Energy Technology Data Exchange (ETDEWEB)
Xu, Tengfang [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Sathaye, Jayant [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Kramer, Klaas Jan [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
2012-07-01
Adoption of efficient end-use technologies is one of the key measures for reducing greenhouse gas (GHG) emissions. How to effectively analyze and manage the costs associated with GHG reductions becomes extremely important for the industry and policy makers around the world. Energy-climate (EC) models are often used for analyzing the costs of reducing GHG emissions for various emission-reduction measures, because an accurate estimation of these costs is critical for identifying and choosing optimal emission reduction measures, and for developing related policy options to accelerate market adoption and technology implementation. However, accuracies of assessing GHG-emission reduction costs by taking into account the adoption of energy efficiency technologies will depend on how well these end-use technologies are represented in integrated assessment models (IAM) and other energy-climate models. In this report, we first conduct a brief review of different representations of end-use technologies (mitigation measures) in various energy-climate models, followed by the problem statement, and a description of the basic concepts of quantifying the cost of conserved energy including integrating no-regrets options.
Zheng, Z.; Zhang, W.; Xu, J.
2011-12-01
As a key component of the global water cycle, runoff plays an important role in earth climate system by affecting the land surface water and energy balance. Realistic runoff parameterization within land surface model (LSM) is significant for accurate land surface modeling and numerical weather and climate prediction. Hence, optimization and refinement of runoff formulation in LSM can further improve model predictive capability of surface-to-atmosphere fluxes which influences the complex interactions between the land surface and atmosphere. Moreover, the performance of runoff simulation in LSM would essential to drought and flood prediction and warning. In this study, a new runoff parameterization named XXT (Xin'anjiang x TOPMODEL) was developed by introducing the water table depth into the soil moisture storage capacity distribution curve (SMSCC) from Xin'anjiang model for surface runoff calculation improvement and then integrating with a TOPMODEL-based groundwater scheme. Several studies had already found a strong correlation between the water table depth and land surface processes. In this runoff parameterization, the dynamic variation of surface and subsurface runoff calculation is connected in a systematic way through the change of water table depth. The XXT runoff parameterization was calibrated and validated with datasets both from observation and Weather Research & Forecasting model (WRF) outputs, the results with high Nash-efficiency coefficient indicated that it has reliable capability of runoff simulation in different climate regions. After model test, the XXT runoff parameterization is coupled with the unified Noah LSM 3.2 instead of simple water balance model (SWB) in order to alleviate the runoff simulating bias which may lead to poor energy partition and evaporation. The impact of XXT is investigated through application of a whole year (1998) simulation at surface flux site of Champaign, Illinois (40.01°N, 88.37°W). The results show that Noah
Luo, Xiangyu; Li, Hong-Yi; Leung, L. Ruby; Tesfa, Teklu K.; Getirana, Augusto; Papa, Fabrice; Hess, Laura L.
2017-03-01
In the Amazon Basin, floodplain inundation is a key component of surface water dynamics and plays an important role in water, energy and carbon cycles. The Model for Scale Adaptive River Transport (MOSART) was extended with a macroscale inundation scheme for representing floodplain inundation. The extended model, named MOSART-Inundation, was used to simulate surface hydrology of the entire Amazon Basin. Previous hydrologic modeling studies in the Amazon Basin identified and addressed a few challenges in simulating surface hydrology of this basin, including uncertainties of floodplain topography and channel geometry, and the representation of river flow in reaches with mild slopes. This study further addressed four aspects of these challenges. First, the spatial variability of vegetation-caused biases embedded in the HydroSHEDS digital elevation model (DEM) data was explicitly addressed. A vegetation height map of about 1 km resolution and a land cover dataset of about 90 m resolution were used in a DEM correction procedure that resulted in an average elevation reduction of 13.2 m for the entire basin and led to evident changes in the floodplain topography. Second, basin-wide empirical formulae for channel cross-sectional dimensions were refined for various subregions to improve the representation of spatial variability in channel geometry. Third, the channel Manning roughness coefficient was allowed to vary with the channel depth, as the effect of riverbed resistance on river flow generally declines with increasing river size. Lastly, backwater effects were accounted for to better represent river flow in mild-slope reaches. The model was evaluated against in situ streamflow records and remotely sensed Envisat altimetry data and Global Inundation Extent from Multi-Satellites (GIEMS) inundation data. In a sensitivity study, seven simulations were compared to evaluate the impacts of the five modeling aspects addressed in this study. The comparisons showed that
Maevskii, K. K.; Kinelovskii, S. A.
2017-12-01
The results of numerical modeling of thermodynamic parameters of oxides are presented by the example of periclase MgO and its mixtures under shock wave loading. The mixture of components experiencing the phase transition is investigated: quartz, SiO2, silicon nitride Si3N4, aluminum nitride AlN. The calculation results obtained by thermodynamic equilibrium component (TEC) models are compared with both the experimental data and the simulation results obtained by other authors.
Recchia, Gabriel; Jones, Michael; Sahlgren, Magnus; Kanerva, Pentti
2010-01-01
Encoding information about the order in which words typically appear has been shown to improve the performance of high-dimensional semantic space models. This requires an encoding operation capable of binding together vectors in an order-sensitive way, and efficient enough to scale to large text corpora. Although both circular convolution and random permutations have been enlisted for this purpose in semantic models, these operations have never been systematically compared. In Experiment 1 we...
Nüssli, Marc-Antoine; Jermann, Patrick; Sangin, Mirweis; Dillenbourg, Pierre
2009-01-01
This study aims to explore the possibility of using machine learning techniques to build predictive models of performance in collaborative induction tasks. More specifically, we explored how signal-level data, like eye-gaze data and raw speech may be used to build such models. The results show that such low level features have effectively some potential to predict performance in such tasks. Implications for future applications design are shortly discussed.
Directory of Open Access Journals (Sweden)
Michael eSchmuker
2011-12-01
Full Text Available The honeybee Apis mellifera has a remarkable ability to detect and locate food sources during foraging, and to associate odor cues with food rewards. In the honeybee’s olfactory system, sensory input is first processed in the antennal lobe (AL network. Uniglomerular projection neurons (PNs convey the sensory code from the AL to higher brain regions via two parallel but anatomically distinct pathways, the lateral and the medial antenno-cerebral tract (l- and m-ACT. Neurons innervating either tract show characteristic differences in odor selectivity, concentration dependence, and representation of mixtures. It is still unknown how this differential stimulus representation is achieved within the AL network. In this contribution, we use a computational network model to demonstrate that the experimentally observed features of odor coding in PNs can be reproduced by varying lateral inhibition and gain control in an otherwise unchanged AL network. We show that odor coding in the l-ACT supports detection and accurate identification of weak odor traces at the expense of concentration sensitivity, while odor coding in the m-ACT provides the basis for the computation and following of concentration gradients but provides weaker discrimination power. Both coding strategies are mutually exclusive, which creates a tradeoff between detection accuracy and sensitivity. The development of two parallel systems may thus reflect an evolutionary solution to this problem that enables honeybees to achieve both tasks during bee foraging in their natural environment, and which could inspire the development of artificial chemosensory devices for odor-guided navigation in robots.
Transverse Crack Modeling and Validation in Rotor Systems, Including Thermal Effects
Directory of Open Access Journals (Sweden)
N. Bachschmid
2003-01-01
Full Text Available This article describes a model that allows the simulation of the static behavior of a transverse crack in a horizontal rotor under the action of weight and other possible static loads and the dynamic behavior of cracked rotating shaft. The crack breathes—that is, the mechanism of the crack's opening and closing is ruled by the stress on the cracked section exerted by the external loads. In a rotor, the stresses are time-dependent and have a period equal to the period of rotation; thus, the crack periodically breathes. An original, simplified model allows cracks of various shapes to be modeled and thermal stresses to be taken into account, as they may influence the opening and closing mechanism. The proposed method was validated by using two criteria. First the crack's breathing mechanism, simulated by the model, was compared with the results obtained by a nonlinear, threedimensional finite element model calculation, and a good agreement in the results was observed. Then the proposed model allowed the development of the equivalent cracked beam. The results of this model were compared with those obtained by the three-dimensional finite element model. Also in this case, there was a good agreement in the results.
A model for firm-specific strategic wisdom : including illustrations and 49 guiding questions
van Straten, Roeland Peter
2017-01-01
This PhD thesis provides an answer to the question ‘How may one think strategically’. It does so by presenting a new prescriptive ‘Model for Firm-Specific Strategic Wisdom’. This Model aims to guide any individual strategist in his or her thinking from a state of firm-specific ‘ignorance’ to a state
Complete Loss and Thermal Model of Power Semiconductors Including Device Rating Information
DEFF Research Database (Denmark)
Ma, Ke; Bahman, Amir Sajjad; Beczkowski, Szymon
2015-01-01
models, only the electrical loadings are focused and treated as design variables, while the device rating is normally pre-defined by experience with limited design flexibility. Consequently, a more complete loss and thermal model is proposed in this paper, which takes into account not only the electrical...
Numerical models of single- and double-negative metamaterials including viscous and thermal losses
DEFF Research Database (Denmark)
Cutanda Henriquez, Vicente; Sánchez-Dehesa, José
2017-01-01
detailed understanding on how viscous and thermal losses affect the setups at different frequencies. The modeling of a simpler single-negative metamaterial also broadens this overview. Both setups have been modeled with quadratic BEM meshes. Each sample, scaled at two different sizes, has been represented...
Representation of the Great Lakes in the Coupled Model Intercomparison Project Version 5
Briley, L.; Rood, R. B.
2017-12-01
The U.S. Great Lakes play a significant role in modifying regional temperatures and precipitation, and as the lakes change in response to a warming climate (i.e., warmer surface water temperatures, decreased ice cover, etc) lake-land-atmosphere dynamics are affected. Because the lakes modify regional weather and are a driver of regional climate change, understanding how they are represented in climate models is important to the reliability of model based information for the region. As part of the Great Lakes Integrated Sciences + Assessments (GLISA) Ensemble project, a major effort is underway to evaluate the Coupled Model Intercomparison Project version (CMIP) 5 global climate models for how well they physically represent the Great Lakes and lake-effects. The CMIP models were chosen because they are a primary source of information in many products developed for decision making (i.e., National Climate Assessment, downscaled future climate projections, etc.), yet there is very little description of how well they represent the lakes. This presentation will describe the results of our investigation of if and how the Great Lakes are represented in the CMIP5 models.
Gasification of biomass in a fixed bed downdraft gasifier--a realistic model including tar.
Barman, Niladri Sekhar; Ghosh, Sudip; De, Sudipta
2012-03-01
This study presents a model for fixed bed downdraft biomass gasifiers considering tar also as one of the gasification products. A representative tar composition along with its mole fractions, as available in the literature was used as an input parameter within the model. The study used an equilibrium approach for the applicable gasification reactions and also considered possible deviations from equilibrium to further upgrade the equilibrium model to validate a range of reported experimental results. Heat balance was applied to predict the gasification temperature and the predicted values were compared with reported results in literature. A comparative study was made with some reference models available in the literature and also with experimental results reported in the literature. Finally a predicted variation of performance of the gasifier by this validated model for different air-fuel ratio and moisture content was also discussed. Copyright © 2011 Elsevier Ltd. All rights reserved.
Dunne, J. P.; John, J. G.; Stock, C. A.
2013-12-01
The world's major Eastern Boundary Currents (EBC) such as the California Current Large Marine Ecosystem (CCLME) are critically important areas for global fisheries. Computational limitations have divided past EBC modeling into two types: high resolution regional approaches that resolve the strong meso-scale structures involved, and coarse global approaches that represent the large scale context for EBCs, but only crudely resolve only the largest scales of their manifestation. These latter global studies have illustrated the complex mechanisms involved in the climate change and acidification response in these regions, with the CCLME response dominated not by local adjustments but large scale reorganization of ocean circulation through remote forcing of water-mass supply pathways. While qualitatively illustrating the limitations of regional high resolution studies in long term projection, these studies lack the ability to robustly quantify change because of the inability of these models to represent the baseline meso-scale structures of EBCs. In the present work, we compare current generation coarse resolution (one degree) and a prototype next generation high resolution (1/10 degree) Earth System Models (ESMs) from NOAA's Geophysical Fluid Dynamics Laboratory in representing the four major EBCs. We review the long-known temperature biases that the coarse models suffer in being unable to represent the timing and intensity of upwelling-favorable winds, along with lack of representation of the observed high chlorophyll and biological productivity resulting from this upwelling. In promising contrast, we show that the high resolution prototype is capable of representing not only the overall meso-scale structure in physical and biogeochemical fields, but also the appropriate offshore extent of temperature anomalies and other EBC characteristics. Results for chlorophyll were mixed; while high resolution chlorophyll in EBCs were strongly enhanced over the coarse resolution
Mondeel, Thierry D G A; Crémazy, Frédéric; Barberis, Matteo
2018-02-01
Multi-scale modeling of biological systems requires integration of various information about genes and proteins that are connected together in networks. Spatial, temporal and functional information is available; however, it is still a challenge to retrieve and explore this knowledge in an integrated, quick and user-friendly manner. We present GEMMER (GEnome-wide tool for Multi-scale Modelling data Extraction and Representation), a web-based data-integration tool that facilitates high quality visualization of physical, regulatory and genetic interactions between proteins/genes in Saccharomyces cerevisiae. GEMMER creates network visualizations that integrate information on function, temporal expression, localization and abundance from various existing databases. GEMMER supports modeling efforts by effortlessly gathering this information and providing convenient export options for images and their underlying data. GEMMER is freely available at http://gemmer.barberislab.com. Source code, written in Python, JavaScript library D3js, PHP and JSON, is freely available at https://github.com/barberislab/GEMMER. M.Barberis@uva.nl. Supplementary data are available at Bioinformatics online. © The Author(s) 2018. Published by Oxford University Press.
Shao, C G; Liu, Z Z; Wang, J F; Luo, J
2003-07-01
The L-state Potts model for rumor is the N-spin chain describing how a simple rumor transmitted by N recreant rumormongers is aggrandized. The studied rumor is represented mathematically by a simple proposition with the universal quantifier, which again is represented geometrically by a point in a proposition space. During the transmission, such a proposition is changed with the change of the rumor, which has individual number N0 at the beginning of the transmission. Correspondingly, the point expressing the proposition may start from an arbitrary site at the proposition space, and then it shifts in the space. Thus, a spin sum of the Potts model corresponds to a walk of a point in the proposition space and spin configuration's numbers is given by enumerating the corresponding walks. The concept of the lattice path in combinatorial mathematics is introduced and the exact series representation of the configuration's numbers is given. The partition function exhibits the transition of the chain and critical equivalent inverse temperature beta(c) is determined. Moreover, there is a crossover value of the individual number, N00. The model has a first-order transition when N0N00.
De Brún, Aoife; McCarthy, Mary; McKenzie, Kenneth; McGloin, Aileen
2015-01-01
This study examined the Irish media discourse on obesity by employing the Common Sense Model of Illness Representations. A media sample of 368 transcripts was compiled from newspaper articles (n = 346), radio discussions (n = 5), and online news articles (n = 17) on overweight and obesity from the years 2005, 2007, and 2009. Using the Common Sense Model and framing theory to guide the investigation, a thematic analysis was conducted on the media sample. Analysis revealed that the behavioral dimensions of diet and activity levels were the most commonly cited causes of and interventions in obesity. The advertising industry was blamed for obesity, and there were calls for increased government action to tackle the issue. Physical illness and psychological consequences of obesity were prevalent in the sample, and analysis revealed that the economy, regardless of its state, was blamed for obesity. These results are discussed in terms of expectations of audience understandings of the issue and the implications of these dominant portrayals and framings on public support for interventions. The article also outlines the value of a qualitative analytical framework that combines the Common Sense Model and framing theory in the investigation of illness narratives.
Directory of Open Access Journals (Sweden)
Nick eBouskill
2012-10-01
Full Text Available Trait-based microbial models show clear promise as tools to represent the diversity and activity of microorganisms across ecosystem gradients. These models parameterize specific traits that determine the relative fitness of an ‘organism’ in a given environment, and represent the complexity of biological systems across temporal and spatial scales. In this study we introduce a microbial community trait-based modeling framework (MicroTrait focused on nitrification (MicroTrait-N that represents the ammonia-oxidizing bacteria (AOB and ammonia-oxidizing archaea (AOA and nitrite oxidizing bacteria (NOB using traits related to enzyme kinetics and physiological properties. We used this model to predict nitrifier diversity, ammonia (NH3 oxidation rates and nitrous oxide (N2O production across pH, temperature and substrate gradients. Predicted nitrifier diversity was predominantly determined by temperature and substrate availability, the latter was strongly influenced by pH. The model predicted that transient N2O production rates are maximized by a decoupling of the AOB and NOB communities, resulting in an accumulation and detoxification of nitrite to N2O by AOB. However, cumulative N2O production (over six month simulations is maximized in a system where the relationship between AOB and NOB is maintained. When the reactions uncouple, the AOB become unstable and biomass declines rapidly, resulting in decreased NH3 oxidation and N2O production. We evaluated this model against site level chemical datasets from the interior of Alaska and accurately simulated NH3 oxidation rates and the relative ratio of AOA:AOB biomass. The predicted community structure and activity indicate (a parameterization of a small number of traits may be sufficient to broadly characterize nitrifying community structure and (b changing decadal trends in climate and edaphic conditions could impact nitrification rates in ways that are not captured by extant biogeochemical models.
A viscoplastic model including anisotropic damage for the time dependent behaviour of rock
Pellet, F.; Hajdu, A.; Deleruyelle, F.; Besnus, F.
2005-08-01
This paper presents a new constitutive model for the time dependent mechanical behaviour of rock which takes into account both viscoplastic behaviour and evolution of damage with respect to time. This model is built by associating a viscoplastic constitutive law to the damage theory. The main characteristics of this model are the account of a viscoplastic volumetric strain (i.e. contractancy and dilatancy) as well as the anisotropy of damage. The latter is described by a second rank tensor. Using this model, it is possible to predict delayed rupture by determining time to failure, in creep tests for example. The identification of the model parameters is based on experiments such as creep tests, relaxation tests and quasi-static tests. The physical meaning of these parameters is discussed and comparisons with lab tests are presented. The ability of the model to reproduce the delayed failure observed in tertiary creep is demonstrated as well as the sensitivity of the mechanical response to the rate of loading. The model could be used to simulate the evolution of the excavated damage zone around underground openings.
Energy Technology Data Exchange (ETDEWEB)
Ozolin, Y.E.; Karol, I.L. [Main Geophysical Observatory, St. Petersburg (Russian Federation); Ramaroson, R. [Office National d`Etudes et de Recherches Aerospatiales (ONERA), 92 - Chatillon (France)
1997-12-31
Box model for coupled gaseous and aqueous phases is used for sensitivity study of potential transformation of trace gases in a cloud environment. The rate of this transformation decreases with decreasing of pH in droplets, with decreasing of photodissociation rates inside the cloud and with increasing of the droplet size. Model calculations show the potential formation of H{sub 2}O{sub 2} in aqueous phase and transformation of gaseous HNO{sub 3} into NO{sub x} in a cloud. This model is applied for exploration of aircraft exhausts evolution in plume inside a cloud. (author) 10 refs.
Directory of Open Access Journals (Sweden)
Rosa Ana Salas
2013-11-01
Full Text Available We propose a modeling procedure specifically designed for a ferrite inductor excited by a waveform in time domain. We estimate the loss resistance in the core (parameter of the electrical model of the inductor by means of a Finite Element Method in 2D which leads to significant computational advantages over the 3D model. The methodology is validated for an RM (rectangular modulus ferrite core working in the linear and the saturation regions. Excellent agreement is found between the experimental data and the computational results.
Directory of Open Access Journals (Sweden)
Christopher D. Taylor
2018-01-01
Full Text Available The computational modeling of corrosion inhibitors at the level of molecular interactions has been pursued for decades, and recent developments are allowing increasingly realistic models to be developed for inhibitor–inhibitor, inhibitor–solvent and inhibitor–metal interactions. At the same time, there remains a need for simplistic models to be used for the purpose of screening molecules for proposed inhibitor performance. Herein, we apply a reductionist model for metal surfaces consisting of a metal cation with hydroxide ligands and use quantum chemical modeling to approximate the free energy of adsorption for several imidazoline class candidate corrosion inhibitors. The approximation is made using the binding energy and the partition coefficient. As in some previous work, we consider different methods for incorporating solvent and reference systems for the partition coefficient. We compare the findings from this short study with some previous theoretical work on similar systems. The binding energies for the inhibitors to the metal hydroxide clusters are found to be intermediate to the binding energies calculated in other work for bare metal vs. metal oxide surfaces. The method is applied to copper, iron, aluminum and nickel metal systems.
Representation of the Solar Capacity Value in the ReEDS Capacity Expansion Model: Preprint
Energy Technology Data Exchange (ETDEWEB)
Sigrin, B.; Sullivan, P.; Ibanez, E.; Margolis, R.
2014-08-01
An important emerging issue is the estimation of renewables' contributions to reliably meeting system demand, or their capacity value. While the capacity value of thermal generation can be estimated easily, assessment of wind and solar requires a more nuanced approach due to resource variability. Reliability-based methods, particularly, effective load-carrying capacity (ELCC), are considered to be the most robust techniques for addressing this resource variability. The Regional Energy Deployment System (ReEDS) capacity expansion model and other long-term electricity capacity planning models require an approach to estimating CV for generalized PV and system configurations with low computational and data requirements. In this paper we validate treatment of solar photovoltaic (PV) capacity value by ReEDS capacity expansion model by comparing model results to literature for a range of energy penetration levels. Results from the ReEDS model are found to compare well with both comparisons--despite not being resolved at an hourly scale.
Energy Technology Data Exchange (ETDEWEB)
McKone, T.E.; Bennett, D.H.
2002-08-01
In multimedia mass-balance models, the soil compartment is an important sink as well as a conduit for transfers to vegetation and shallow groundwater. Here a novel approach for constructing soil transport algorithms for multimedia fate models is developed and evaluated. The resulting algorithms account for diffusion in gas and liquid components; advection in gas, liquid, or solid phases; and multiple transformation processes. They also provide an explicit quantification of the characteristic soil penetration depth. We construct a compartment model using three and four soil layers to replicate with high reliability the flux and mass distribution obtained from the exact analytical solution describing the transient dispersion, advection, and transformation of chemicals in soil with fixed properties and boundary conditions. Unlike the analytical solution, which requires fixed boundary conditions, the soil compartment algorithms can be dynamically linked to other compartments (air, vegetation, ground water, surface water) in multimedia fate models. We demonstrate and evaluate the performance of the algorithms in a model with applications to benzene, benzo(a)pyrene, MTBE, TCDD, and tritium.
Directory of Open Access Journals (Sweden)
Zhenyu Wu
2018-04-01
Full Text Available Predictive maintenance plays an important role in modern Cyber-Physical Systems (CPSs and data-driven methods have been a worthwhile direction for Prognostics Health Management (PHM. However, two main challenges have significant influences on the traditional fault diagnostic models: one is that extracting hand-crafted features from multi-dimensional sensors with internal dependencies depends too much on expertise knowledge; the other is that imbalance pervasively exists among faulty and normal samples. As deep learning models have proved to be good methods for automatic feature extraction, the objective of this paper is to study an optimized deep learning model for imbalanced fault diagnosis for CPSs. Thus, this paper proposes a weighted Long Recurrent Convolutional LSTM model with sampling policy (wLRCL-D to deal with these challenges. The model consists of 2-layer CNNs, 2-layer inner LSTMs and 2-Layer outer LSTMs, with under-sampling policy and weighted cost-sensitive loss function. Experiments are conducted on PHM 2015 challenge datasets, and the results show that wLRCL-D outperforms other baseline methods.
Room acoustics modeling using a point-cloud representation of the room geometry
DEFF Research Database (Denmark)
Markovic, Milos; Olesen, Søren Krarup; Hammershøi, Dorte
2013-01-01
geometry acquisition is presented. The method exploits a depth sensor of the Kinect device that provides a point based information of a scanned room interior. After post-processing of the Kinect output data, a 3D point-cloud model of the room is obtained. Sound transmission between two selected points...... within the room is simulated using a 3D point-cloud model to define a room geometry and a discrete ray-tracing method to calculate sound propagation paths within the enclosure. Based on a 3D point-cloud room model a voxel grid is created and each voxel has been assigned certain properties....... These properties define how a ray acts when it reaches the voxel, e.g. reflects specular and attenuates according to the surface absorption or runs straight through without any attenuation. Sound propagation is simulated by a discrete ray traversal algorithm based on the uniform voxel grid. Several simulations...
Representation of Solar Capacity Value in the ReEDS Capacity Expansion Model
Energy Technology Data Exchange (ETDEWEB)
Sigrin, B. [National Renewable Energy Lab. (NREL), Golden, CO (United States); Sullivan, P. [National Renewable Energy Lab. (NREL), Golden, CO (United States); Ibanez, E. [National Renewable Energy Lab. (NREL), Golden, CO (United States); Margolis, R. [National Renewable Energy Lab. (NREL), Golden, CO (United States)
2014-03-01
An important issue for electricity system operators is the estimation of renewables' capacity contributions to reliably meeting system demand, or their capacity value. While the capacity value of thermal generation can be estimated easily, assessment of wind and solar requires a more nuanced approach due to the resource variability. Reliability-based methods, particularly assessment of the Effective Load-Carrying Capacity, are considered to be the most robust and widely-accepted techniques for addressing this resource variability. This report compares estimates of solar PV capacity value by the Regional Energy Deployment System (ReEDS) capacity expansion model against two sources. The first comparison is against values published by utilities or other entities for known electrical systems at existing solar penetration levels. The second comparison is against a time-series ELCC simulation tool for high renewable penetration scenarios in the Western Interconnection. Results from the ReEDS model are found to compare well with both comparisons, despite being resolved at a super-hourly temporal resolution. Two results are relevant for other capacity-based models that use a super-hourly resolution to model solar capacity value. First, solar capacity value should not be parameterized as a static value, but must decay with increasing penetration. This is because -- for an afternoon-peaking system -- as solar penetration increases, the system's peak net load shifts to later in the day -- when solar output is lower. Second, long-term planning models should determine system adequacy requirements in each time period in order to approximate LOLP calculations. Within the ReEDS model we resolve these issues by using a capacity value estimate that varies by time-slice. Within each time period the net load and shadow price on ReEDS's planning reserve constraint signals the relative importance of additional firm capacity.
A Two-Account Life Insurance Model for Scenario-Based Valuation Including Event Risk
DEFF Research Database (Denmark)
Jensen, Ninna Reitzel; Schomacker, Kristian Juul
2015-01-01
Using a two-account model with event risk, we model life insurance contracts taking into account both guaranteed and non-guaranteed payments in participating life insurance as well as in unit-linked insurance. Here, event risk is used as a generic term for life insurance events, such as death......, disability, etc. In our treatment of participating life insurance, we have special focus on the bonus schemes “consolidation” and “additional benefits”, and one goal is to formalize how these work and interact. Another goal is to describe similarities and differences between participating life insurance...... and unit-linked insurance. By use of a two-account model, we are able to illustrate general concepts without making the model too abstract. To allow for complicated financial markets without dramatically increasing the mathematical complexity, we focus on economic scenarios. We illustrate the use of our...
DEFF Research Database (Denmark)
Bahman, Amir Sajjad; Ma, Ke; Blaabjerg, Frede
2018-01-01
Detailed thermal dynamics of high power IGBT modules are important information for the reliability analysis and thermal design of power electronic systems. However, the existing thermal models have their limits to correctly predict these complicated thermal behavior in the IGBTs: The typically used...... thermal model based on one-dimensional RC lumps have limits to provide temperature distributions inside the device, moreover some variable factors in the real-field applications like the cooling and heating conditions of the converter cannot be adapted. On the other hand, the more advanced three......-dimensional thermal models based on Finite Element Method (FEM) need massive computations, which make the long-term thermal dynamics difficult to calculate. In this paper, a new lumped three-dimensional thermal model is proposed, which can be easily characterized from FEM simulations and can acquire the critical...
Advanced Modeling of Ramp Operations including Departure Status at Secondary Airports, Phase I
National Aeronautics and Space Administration — This project addresses three modeling elements relevant to NASA's IADS research and ATD-2 project, two related to ramp operations at primary airports and one related...
Extending the Scope of the Acculturation/Pidginization Model to Include Cognition.
Schumann, John H.
1990-01-01
Examines five cognitive models for second-language acquisition (SLA) and assesses how each might account for the Pidginized interlanguage found in the early stages of second-language acquisition. (23 references) (JL)
Umakanth, U.
2015-11-07
The aim of the study is to evaluate the performance of regional climate model (RegCM) version 4.4 over south Asian CORDEX domain to simulate seasonal mean and monsoon intraseasonal oscillations (MISOs) during Indian summer monsoon. Three combinations of Grell (G) and Emanuel (E) cumulus schemes namely, RegCM-EG, RegCM-EE and RegCM-GE have been used. The model is initialized at 1st January, 2000 for a 13-year continuous simulation at a spatial resolution of 50 km. The models reasonably simulate the seasonal mean low level wind pattern though they differ in simulating mean precipitation pattern. All models produce dry bias in precipitation over Indian land region except in RegCM-EG where relatively low value of dry bias is observed. On seasonal scale, the performance of RegCM-EG is more close to observation though it fails at intraseasonal time scales. In wave number-frequency spectrum, the observed peak in zonal wind (850 hPa) at 40–50 day scale is captured by all models with a slight change in amplitude, however, the 40–50 day peak in precipitation is completely absent in RegCM-EG. The space–time characteristics of MISOs are well captured by RegCM-EE over RegCM-GE, however it fails to show the eastward propagation of the convection across the Maritime Continent. Except RegCM-EE all other models completely underestimates the moisture advection from Equatorial Indian Ocean onto Indian land region during life-cycle of MISOs. The characteristics of MISOs are studied for strong (SM) and weak (WM) monsoon years and the differences in model performances are analyzed. The wavelet spectrum of rainfall over central India denotes that, the SM years are dominated by high frequency oscillations (period <20 days) whereas little higher periods (>30 days) along with dominated low periods (<20 days) observed during WM years. During SM, RegCM-EE is dominated with high frequency oscillations (period <20 days) whereas in WM, RegCM-EE is dominated with periods >20
CSIR Research Space (South Africa)
Garland, Rebecca M
2016-11-01
Full Text Available particles and associated transport pathways in regional climate modelling in Africa Rebecca M. Garland1,2,*, Hannah M. Horowitz3, Christien J. Engelbrecht4, Zane Dedkind1, Mary-Jane M. Bopape5, Stuart J Piketh2, and Francois A. Engelbrecht1,5 1... coast out to the Atlantic Ocean (Garstang et al., 1996; Swap et al., 2003). This latter exit pathway aligns with the stratocumulus cloud deck that forms off of the southwestern coast, and is an area of large uncertainty in modelling aerosol...
Miguel, Isabel; Valentim,