WorldWideScience

Sample records for microscopic pointed structures

  1. Templates for Deposition of Microscopic Pointed Structures

    Science.gov (United States)

    Pugel, Diane E.

    2008-01-01

    Templates for fabricating sharply pointed microscopic peaks arranged in nearly regular planar arrays can be fabricated by a relatively inexpensive technique that has recently been demonstrated. Depending on the intended application, a semiconducting, insulating, or metallic film could be deposited on such a template by sputtering, thermal evaporation, pulsed laser deposition, or any other suitable conventional deposition technique. Pointed structures fabricated by use of these techniques may prove useful as photocathodes or field emitters in plasma television screens. Selected peaks could be removed from such structures and used individually as scanning tips in atomic force microscopy or mechanical surface profiling.

  2. Optical alignment using the Point Source Microscope

    Science.gov (United States)

    Parks, Robert E.; Kuhn, William P.

    2005-08-01

    We give an example of a Point Source Microscope (PSM) and describe its uses as an aid in the alignment of optical systems including the referencing of optical to mechanical datums. The PSM is a small package (about 100x150x30 mm), including a point source of light, beam splitter, microscope objective and digital CCD camera to detect the reflected light spot. A software package in conjunction with a computer video display locates the return image in three degrees of freedom relative to an electronic spatial reference point. The PSM also includes a Koehler illumination source so it may be used as a portable microscope for ordinary imaging and the microscope can be zoomed under computer control. For added convenience, the laser diode point source can be made quite bright to facilitate initial alignment under typical laboratory lighting conditions. The PSM is particularly useful in aligning optical systems that do not have circular symmetry or are distributed in space such as off-axis systems. The PSM is also useful for referencing the centers of curvatures of optical surfaces to mechanical datums of the structure in which the optics are mounted. By removing the microscope objective the PSM can be used as an electronic autocollimator because of the infinite conjugate optical design.

  3. Scanning microscopic four-point conductivity probes

    DEFF Research Database (Denmark)

    Petersen, Christian Leth; Hansen, Torben Mikael; Bøggild, Peter

    2002-01-01

    A method for fabricating microscopic four-point probes is presented. The method uses silicon-based microfabrication technology involving only two patterning steps. The last step in the fabrication process is an unmasked deposition of the conducting probe material, and it is thus possible to select...... the conducting material either for a silicon wafer or a single probe unit. Using shadow masking photolithography an electrode spacing (pitch) down to 1.1 mum was obtained, with cantilever separation down to 200 run. Characterisation measurements have shown the microscopic probes to be mechanically very flexible...

  4. Magnetic structure of hexagonal YMnO3 and LuMnO3 from a microscopic point of view

    Science.gov (United States)

    Solovyev, I. V.; Valentyuk, M. V.; Mazurenko, V. V.

    2012-08-01

    The aim of this work is to establish a basic microscopic picture, which stands behind complex magnetic properties of hexagonal manganites. For these purposes, we consider two characteristic compounds: YMnO3 and LuMnO3, which form different magnetic structures in the ground state (P6̲3cm̲ and P6̲3c̲m, respectively). First, we construct an electronic low-energy model for the Mn 3d bands of YMnO3 and LuMnO3, and derive parameters of this model from the first-principles calculations. From the solution of this model, we conclude that, despite strong frustration effects in the hexagonal lattice, the relativistic spin-orbit interaction lifts the degeneracy of the magnetic ground state. Furthermore, the experimentally observed magnetic structures are successfully reproduced by the low-energy model. Then, we analyze this result in terms of interatomic magnetic interactions, which were computed using different types of approximations (starting from the model Hamiltonian as well as directly from the first-principles electronic structure calculations in the local-spin-density approximation). We argue that the main reason why YMnO3 and LuMnO3 tend to form different magnetic structures is related to the behavior of the single-ion anisotropy, which reflects the directional dependence of the lattice distortion: namely, the expansion and contraction of the Mn-trimers, which take place in YMnO3 and LuMnO3, respectively. On the other hand, the magnetic coupling between the planes is controlled by the next-nearest-neighbor interactions, which are less sensitive to the direction of the trimerization. In the P6̲3cm̲ structure of YMnO3, the Dzyaloshinskii-Moriya interactions lead to the spin canting out of the hexagonal plane, which is additive to the effect of the single-ion anisotropy. Finally, using the Berry-phase formalism, we evaluate the magnetic-state dependence of the ferroelectric polarization, and discuss potential applications of the latter in magnetoelectric switching

  5. Microscopic structure of liquid hydrogen

    CERN Document Server

    Zoppi, M

    2003-01-01

    Hydrogen makes the simplest molecular liquid. Nonetheless, due to several different reasons, measuring its microscopic structure has been one of the most challenging tasks in neutron diffraction experiments. The recent development of modern pulsed neutron sources triggered a renewed experimental interest which, in turn, led to new knowledge and also to a more effective use of the classic reactor-based experimental data. The contemporary development of quantum mechanical computer simulation techniques, and a critical comparison among the results of different experiments using steady and pulsed neutron sources, resulted in a quantitatively reliable solution of the problem. (topical review)

  6. Microscopic return point memory in Co/Pd multilayer films

    Energy Technology Data Exchange (ETDEWEB)

    Seu, K.A.; Su, R.; Roy, S.; Parks, D.; Shipton, E.; Fullerton, E.E.; Kevan, S.D.

    2009-10-01

    We report soft x-ray speckle metrology measurements of microscopic return point and complementary point memory in Co/Pd magnetic films having perpendicular anisotropy. We observe that the domains assemble into a common labyrinth phase with a period that varies by nearly a factor of two between initial reversal and fields near saturation. Unlike previous studies of similar systems, the ability of the film to reproduce its domain structure after magnetic cycling through saturation varies from loop to loop, from position to position on the sample, and with the part of the speckle pattern used in the metrology measurements. We report the distribution of memory as a function of field and discuss these results in terms of the reversal process.

  7. Microscopic Current Flow Patterns in Nanoscale Quantum Point Contacts

    Science.gov (United States)

    Sai, Na; Bushong, Neil; Hatcher, Ryan; di Ventra, Massimiliano

    2006-03-01

    Transport in nanoscale conductors has been studied extensively mainly using the stationary scattering approach. However, the dynamical nature of transport, and in particular, the flow patterns of the microscopic current through a nanoscale junction, have remained poorly understood. We apply a novel time-dependent transport approach [1], which combines closed and finite geometries with time-dependent density functional theory,to study current flow patterns in nanoscale quantum point contacts [2]. The results of both atomistic and jellium calculations show that surface charges form dynamically at the junction-electrode interfaces in both abrupt and adiabatic junctions. The curr ent exhibits some characteristics of a classical hydrodynamic liquid but also displays unique patterns arising from the interaction with the surface charges. We also investigate the effect of the flow velocity, charge density, and lattice structures on the electron dynamics. If time permits we also discuss the effects of the viscosity of the electron liquid [3]. Work supported by DOE (DE-FG02-05ER46204). [1] M. Di Ventra and T.N. Todorov, J. Phys. Cond. Matt. 16, 8025 (2004). [2] N. Bushong, N. Sai and, M. Di Ventra, Nano Lett. (in press). [3] N. Sai, M. Zwolak, G. Vignale, and M. Di Ventra, Phys. Rev. Lett. 94, 186810 (2005 ).

  8. The microscopic structure of the hydrogen liquids

    CERN Document Server

    Zoppi, M; Celli, M; Cuello, G J; Formisano, F; Guarini, E; Magli, R; Neumann, M

    2003-01-01

    We have measured the microscopic structure of liquid para-hydrogen by means of a neutron diffraction experiment on the D4C liquids diffractometer at Institute Laue-Langevin (Grenoble, France). This is the first direct neutron diffraction measurement of the static structure factor of hydrogen. The present determination of the microscopic structure of hydrogen is consistent with previous experimental determinations carried out on liquid deuterium and with path integral Monte Carlo simulations. The comparison with recent x-ray determinations is also satisfactory.

  9. Point-of-Care Pathology with Miniature Microscopes

    Directory of Open Access Journals (Sweden)

    Jonathan T. C. Liu

    2011-01-01

    Full Text Available Advances in optical designs are enabling the development of miniature microscopes that can examine tissue in situ for early anatomic and molecular indicators of disease, in real time, and at cellular resolution. These new devices will lead to major changes in how diseases are detected and managed, driving a shift from today's diagnostic paradigm of biopsy followed by histopathology and recommended therapy, to non-invasive point-of-care diagnosis with possible same-session definitive treatment. This shift may have major implications for the training requirements of future physicians to enable them to interpret real-time in vivo microscopic data, and will also shape the emerging fields of telepathology and telemedicine. Implementation of new technologies into clinical practice is a complex process that requires bridging gaps between clinicians, engineers and scientists. This article provides a forward-looking discussion of these issues, with a focus on malignant and pre-malignant lesions, by first highlighting some of the clinical areas where point-of-care in vivo microscopy could address unmet needs, and then by reviewing the technological challenges that are being addressed, or need to be addressed, for in vivo microscopy to become a standard clinical tool.

  10. Microscopic dynamics in liquid metals: The experimental point of view

    Science.gov (United States)

    Scopigno, Tullio; Ruocco, Giancarlo; Sette, Francesco

    2005-07-01

    The experimental results relevant for the understanding of the microscopic dynamics in liquid metals are reviewed, with special regard to the ones achieved in the last two decades. Inelastic neutron scattering played a major role since the development of neutron facilities in the 1960s. The last ten years, however, saw the development of third generation radiation sources, which opened the possibility of performing inelastic scattering with x rays, thus disclosing previously unaccessible energy-momentum regions. The purely coherent response of x rays, moreover, combined with the mixed coherent or incoherent response typical of neutron scattering, provides enormous potentialities to disentangle aspects related to the collectivity of motion from the single-particle dynamics. If the last 20years saw major experimental developments, on the theoretical side fresh ideas came up to the side of the most traditional and established theories. Beside the raw experimental results therefore models and theoretical approaches are reviewed for the description of microscopic dynamics over different length scales, from the hydrodynamic region down to the single-particle regime, walking the perilous and sometimes uncharted path of the generalized hydrodynamics extension. Approaches peculiar of conductive systems, based on the ionic plasma theory, are also considered, as well as kinetic and mode coupling theory applied to hard-sphere systems, which turn out to mimic with remarkable detail the atomic dynamics of liquid metals. Finally, cutting edge issues and open problems, such as the ultimate origin of the anomalous acoustic dispersion or the relevance of transport properties of a conductive system in ruling the ionic dynamic structure factor, are discussed.

  11. Effect of reference point selection on microscopic stress measurement using EBSD

    Energy Technology Data Exchange (ETDEWEB)

    Mikami, Yoshiki, E-mail: mikami@mapse.eng.osaka-u.ac.jp [Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871 (Japan); Oda, Kazuo [Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871 (Japan); Kamaya, Masayuki [Institute of Nuclear Safety System, Inc., 64 Sata, Mihama-cho, Mikata-gun, Fukui 919-1205 (Japan); Mochizuki, Masahito [Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871 (Japan)

    2015-10-28

    It is important to evaluate microscopic stress distributions on the order of the grain size to clarify the deformation and fracture behavior of structural materials. In this study, the microscopic stress distribution of coarse-grained austenitic stainless steel during tensile testing was measured using a method that employs cross-correlation of the electron backscatter diffraction (EBSD) pattern, and the effect of the reference point selection on the measured stress was investigated. First, parameters that characterize the quality of the EBSD pattern measurement—namely, the image quality (IQ), confidence index (CI), and Fit—and the parameter that corresponds to the extent of the plastic deformation—the kernel average misorientation (KAM)—were used to determine the reference point. It was confirmed that the value of the microscopic stress measured using the EBSD-based approach is relative to the value of the stress state of the reference point. Second, multiple reference points were determined within a grain by considering only the location, and the stress distribution in the grain was evaluated using each of the reference points. The deviation of the measured stress was calculated from the averaged value for all the measured results using a certain reference point, and its relationship to parameters such as the IQ, CI, Fit, and KAM of the reference point used was investigated. It was demonstrated that the choice of parameters did not significantly affect the evaluation of the relative stress distribution within a grain. The results of this study therefore show that the selection of the reference point does not affect the measured stress distribution, as long as the evaluation is limited to the relative stress within a grain for the selected reference point.

  12. SPY: A new scission point model based on microscopic ingredients to predict fission fragments properties

    Science.gov (United States)

    Lemaître, J.-F.; Dubray, N.; Hilaire, S.; Panebianco, S.; Sida, J.-L.

    2013-12-01

    Our purpose is to determine fission fragments characteristics in a framework of a scission point model named SPY for Scission Point Yields. This approach can be considered as a theoretical laboratory to study fission mechanism since it gives access to the correlation between the fragments properties and their nuclear structure, such as shell correction, pairing, collective degrees of freedom, odd-even effects. Which ones are dominant in final state? What is the impact of compound nucleus structure? The SPY model consists in a statistical description of the fission process at the scission point where fragments are completely formed and well separated with fixed properties. The most important property of the model relies on the nuclear structure of the fragments which is derived from full quantum microscopic calculations. This approach allows computing the fission final state of extremely exotic nuclei which are inaccessible by most of the fission model available on the market.

  13. SPY: A new scission point model based on microscopic ingredients to predict fission fragments properties

    Directory of Open Access Journals (Sweden)

    Lemaître J.-F.

    2013-12-01

    Full Text Available Our purpose is to determine fission fragments characteristics in a framework of a scission point model named SPY for Scission Point Yields. This approach can be considered as a theoretical laboratory to study fission mechanism since it gives access to the correlation between the fragments properties and their nuclear structure, such as shell correction, pairing, collective degrees of freedom, odd-even effects. Which ones are dominant in final state? What is the impact of compound nucleus structure? The SPY model consists in a statistical description of the fission process at the scission point where fragments are completely formed and well separated with fixed properties. The most important property of the model relies on the nuclear structure of the fragments which is derived from full quantum microscopic calculations. This approach allows computing the fission final state of extremely exotic nuclei which are inaccessible by most of the fission model available on the market.

  14. Microscopic structure of four body resonances

    CERN Document Server

    Delion, D S

    2002-01-01

    A microscopic approach of four body states, seen as decaying states of scattering resonances is given. The equations of motion describing cluster-like states are derived within the multi-step shell-model approach. The lowest collective two particle Eigenmodes are used as building blocks for the alpha-like states. A good agreement with the low lying states in sup 2 sup 1 sup 2 Po is obtained. The spectroscopic factor of the alpha-decay between ground states is reproduced. It is shown that only by including the continuum part of the single particle spectrum, the decay width for alpha cluster-decay processes is reproduced. The alpha-like structure of the lowest states in sup 2 sup 1 sup 2 Po is analyzed and strong high-lying resonances are predicted. A good agreement with experimental quasi-molecular states in sup 4 sup 0 Ca is obtained. (authors)

  15. Macroscopic and Microscopic Gradient Structures of Bamboo Culms

    Directory of Open Access Journals (Sweden)

    Suwat SUTNAUN

    2005-01-01

    Full Text Available This work studied the structure of bamboo culms which is naturally designed to retard the bending stress caused by a wind load. A macroscopic gradient structure (diameter, thickness and internodal length and a microscopic one (distribution of fiber of three sympodial bamboo species i.e. Tong bamboo (Dendrocalamus asper Backer., Pah bamboo (Gigantochloa bambos and Pak bamboo (Gigantochloa hasskarliana were examined. From the macroscopic point of view, the wind-load generated bending stress for the tapered hollow tube of bamboo was found to vary uniformly with height, especially at the middle of the culms. Furthermore, the macroscopic shape of bamboo culm is about 2-6 times stiffer in bending mode than one with a solid circular section for the same amount of wood material. Microscopically, the distribution of fiber in the radial direction linearly decreases from the outer surface to the inner surface in the same manner as that of the distribution of the bending stress in the radial direction. Distribution of fiber along the vertical length of bamboos at each height is proportional to the level of bending stress generated by the wind load. Both macroscopic and microscopic gradient structures of sympodial type bamboos were found to be less effective to retard the bending stress than those of monopodial type bamboo.

  16. Wall charge and potential from a microscopic point of view

    CERN Document Server

    Bronold, F X; Heinisch, R L; Marbach, J

    2012-01-01

    Macroscopic objects floating in an ionized gas (plasma walls) accumulate electrons more efficiently than ions because the influx of electrons outruns the influx of ions. The floating potential acquired by plasma walls is thus negative with respect to the plasma potential. Until now plasma walls are typically treated as perfect absorbers for electrons and ions, irrespective of the microphysics at the surface responsible for charge deposition and extraction. This crude description, sufficient for present day technological plasmas, will run into problems in solid-state based gas discharges where, with continuing miniaturization, the wall becomes an integral part of the plasma device and the charge transfer across it has to be modelled more precisely. The purpose of this paper is to review our work, where we questioned the perfect absorber model and initiated a microscopic description of the charge transfer across plasma walls, put it into perspective, and indicate directions for future research.

  17. Electrical conduction through surface superstructures measured by microscopic four-point probes

    DEFF Research Database (Denmark)

    Hasegawa, S.; Shiraki, I.; Tanabe, F.

    2003-01-01

    For in-situ measurements of the local electrical conductivity of well-defined crystal surfaces in ultra-high vacuum, we have developed two kinds of microscopic four-point probe methods. One involves a "four-tip STM prober," in which four independently driven tips of a scanning tunneling microscope...

  18. Direct measurement of surface-state conductance by microscopic four-point probe method

    DEFF Research Database (Denmark)

    Hasegawa, S.; Shiraki, I.; Tanikawa, T.

    2002-01-01

    For in situ measurements of local electrical conductivity of well defined crystal surfaces in ultrahigh vacuum, we have developed microscopic four-point probes with a probe spacing of several micrometres, installed in a scanning-electron - microscope/electron-diffraction chamber. The probe...

  19. Building Points - MO 2012 Stoddard Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Missouri Structure Points are structure points generated from a two pass look over the 2007 State 2ft imagery. Unlike the structure footprints, the building point...

  20. Building Points - MO 2012 Dunklin Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Missouri Structure Points are structure points generated from a two pass look over the 2007 State 2ft imagery. Unlike the structure footprints, the building point...

  1. Building Points - MO 2012 Scott Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Missouri Structure Points are structure points generated from a two pass look over the 2007 State 2ft imagery. Unlike the structure footprints, the building point...

  2. Building Points - MO 2012 Pemiscot Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Missouri Structure Points are structure points generated from a two pass look over the 2007 State 2ft imagery. Unlike the structure footprints, the building point...

  3. Building Points - MO 2012 New Madrid Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Missouri Structure Points are structure points generated from a two pass look over the 2007 State 2ft imagery. Unlike the structure footprints, the building point...

  4. Building Points - MO 2012 Mississippi Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Missouri Structure Points are structure points generated from a two pass look over the 2007 State 2ft imagery. Unlike the structure footprints, the building point...

  5. Microscopically derived potential energy surfaces from mostly structural considerations

    Energy Technology Data Exchange (ETDEWEB)

    Ermamatov, M.J. [Instituto de Física, Universidade Federal Fluminense, 24210-340, Niterói, Rio de Janeiro (Brazil); Institute of Nuclear Physics, Ulughbek, Tashkent 100214 (Uzbekistan); Hess, Peter O., E-mail: hess@nucleares.unam.mx [Instituto de Ciencias Nucleares, UNAM, Circuito Exterior, C.U., A.P. 70-543, 04510, Mexico D.F. (Mexico)

    2016-08-15

    A simple procedure to estimate the quadrupole Potential-Energy-Surface (PES) is presented, using mainly structural information, namely the content of the shell model space and the Pauli exclusion principle. Further microscopic properties are implicitly contained through the use of results from the Möller and Nix tables or experimental information. A mapping to the geometric potential is performed yielding the PES. The General Collective Model is used in order to obtain an estimate on the spectrum and quadrupole transitions, adjusting only the mass parameter. First, we test the conjecture on known nuclei, deriving the PES and compare them to known data. We will see that the PES approximates very well the structure expected. Having acquired a certain confidence, we predict the PES of several chain of isotopes of heavy and super-heavy nuclei and at the end we investigate the structure of nuclei in the supposed island of stability. One of the main points to show is that simple assumptions can provide already important information on the structure of nuclei outside known regions and that spectra and electromagnetic transitions can be estimated without using involved calculations and assumptions. The procedure does not allow to calculate binding energies. The method presented can be viewed as a starting point for further improvements.

  6. Integrated system for point cloud reconstruction and simulated brain shift validation using tracked surgical microscope

    Science.gov (United States)

    Yang, Xiaochen; Clements, Logan W.; Luo, Ma; Narasimhan, Saramati; Thompson, Reid C.; Dawant, Benoit M.; Miga, Michael I.

    2017-03-01

    Intra-operative soft tissue deformation, referred to as brain shift, compromises the application of current imageguided surgery (IGS) navigation systems in neurosurgery. A computational model driven by sparse data has been used as a cost effective method to compensate for cortical surface and volumetric displacements. Stereoscopic microscopes and laser range scanners (LRS) are the two most investigated sparse intra-operative imaging modalities for driving these systems. However, integrating these devices in the clinical workflow to facilitate development and evaluation requires developing systems that easily permit data acquisition and processing. In this work we present a mock environment developed to acquire stereo images from a tracked operating microscope and to reconstruct 3D point clouds from these images. A reconstruction error of 1 mm is estimated by using a phantom with a known geometry and independently measured deformation extent. The microscope is tracked via an attached tracking rigid body that facilitates the recording of the position of the microscope via a commercial optical tracking system as it moves during the procedure. Point clouds, reconstructed under different microscope positions, are registered into the same space in order to compute the feature displacements. Using our mock craniotomy device, realistic cortical deformations are generated. Our experimental results report approximately 2mm average displacement error compared with the optical tracking system. These results demonstrate the practicality of using tracked stereoscopic microscope as an alternative to LRS to collect sufficient intraoperative information for brain shift correction.

  7. Conductivity of individual particles measured by a microscopic four-point-probe method

    OpenAIRE

    Ling Sun; Jianjun Wang; Elmar Bonaccurso

    2013-01-01

    We introduce a technique for measuring the conductivity of individual hybrid metal, semiconducting core-shell and full-metal conducting particles by a microscopic four-point probe (μ-4PP) method. The four-point probe geometry allows for minimizing contact resistances between electrodes and particles. By using a focused ion beam we fabricate platinum nanoleads between four microelectrodes on a silicon chip and an individual particle, and determine the particle's conductivity via sensitive curr...

  8. Structure Identification in High-Resolution Transmission Electron Microscopic Images

    DEFF Research Database (Denmark)

    Vestergaard, Jacob Schack; Kling, Jens; Dahl, Anders Bjorholm

    2014-01-01

    A connection between microscopic structure and macroscopic properties is expected for almost all material systems. High-resolution transmission electron microscopy is a technique offering insight into the atomic structure, but the analysis of large image series can be time consuming. The present ...

  9. Microscopic Approaches to Nuclear Structure: Configuration Interaction

    Energy Technology Data Exchange (ETDEWEB)

    Ormand, W E

    2007-09-21

    The configuration interaction (CI) approach to solving the nuclear many-body problem, also known as the interacting shell model, has proven to be powerful tool in understanding the structure of nuclei. The principal criticism of past applications of the shell model is the reliance on empirical tuning to interaction matrix elements. If an accurate description of nuclei far from the valley of stability, where little or no data is available, a more fundamental approach is needed. This starts with recent ab initio approaches with effective interactions in the no-core shell model (NCSM). Using effective-field theory for guidance, fully ab initio descriptions of nuclei up to {sup 16}O with QCD based NN, NNN, and NNNN interactions will be possible within the next five years. An important task is then to determine how to use these NCSM results to develop effective interactions to describe heavier nuclei without the need to resort to an empirical retuning with every model space. Thus, it is likely that more traditional CI applications utilizing direct diagonalization and more fundamental interactions will be applicable to nuclei with perhaps up to one hundred constituents. But, these direct diagonalization CI applications will always be computationally limited due to the rapid increase in the number of configurations with particle number. Very recently, the shifted-contour method has been applied to the Auxiliary-field Monte Carlo approach to the Shell Model (AFMCSM), and preliminary applications exhibit a remarkable taming of the notorious sign problem. If the mitigation of the sign problem holds true, the AFMCSM will offer a method to compute quantum correlations to mean-field applications for just about all nuclei; giving exact results for CI model spaces that can approach 10{sup 20-25}. In these lectures, I will discuss modern applications of CI to the nuclear many-body problem that have the potential to guide nuclear structure theory into the next decade.

  10. Observation of MWCNTs with low-energy electron point source microscope

    Institute of Scientific and Technical Information of China (English)

    Yu Jie; Bai Xin; Zhang Zhao-Xiang; Zhang Geng-Min; Guo Deng-Zhu; Xue Zeng-Quan

    2006-01-01

    The low-energy electron point source (LEEPS) microscope, which creates enlarged projection images with lowenergy field emission electron beams, can be used to observe the projection image of nano-scale samples and to characterize the coherence of the field emission beam. In this paper we report the design and test operation performance of a home-made LEEPS microscope. Multi-walled carbon nanotubes (MWCNTs) synthesized by the CVD method were observed by LEEPS microscope using a conventional tungsten tip, and projection images with the magnification of up to 104 was obtained. The resolution of the acquired images is ~10 nm. A higher resolution and a larger magnification can be expected when the AC magnetic field inside the equipment is shielded and the vibration of the instrument reduced.

  11. Modelling point patterns with linear structures

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    Many observed spatial point patterns contain points placed roughly on line segments. Point patterns exhibiting such structures can be found for example in archaeology (locations of bronze age graves in Denmark) and geography (locations of mountain tops). We consider a particular class of point...... processes whose realizations contain such linear structures. Such a point process is constructed sequentially by placing one point at a time. The points are placed in such a way that new points are often placed close to previously placed points, and the points form roughly line shaped structures. We...

  12. Modelling point patterns with linear structures

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    2009-01-01

    Many observed spatial point patterns contain points placed roughly on line segments. Point patterns exhibiting such structures can be found for example in archaeology (locations of bronze age graves in Denmark) and geography (locations of mountain tops). We consider a particular class of point...... processes whose realizations contain such linear structures. Such a point process is constructed sequentially by placing one point at a time. The points are placed in such a way that new points are often placed close to previously placed points, and the points form roughly line shaped structures. We...

  13. On the Concept "Microscope": Biology Student Teachers' Cognitive Structure

    Science.gov (United States)

    Kurt, Hakan; Ekici, Gulay; Aktas, Murat; Aksu, Ozlem

    2013-01-01

    The purpose of the current study is to determine biology student teachers' cognitive structures on the concept of microscope. Qualitative research methodology has been applied in the study. The data were collected from biology student teachers. Free word association test and drawing-writing test were used to collect data. The data collected were…

  14. On the Concept "Microscope": Biology Student Teachers' Cognitive Structure

    Science.gov (United States)

    Kurt, Hakan; Ekici, Gulay; Aktas, Murat; Aksu, Ozlem

    2013-01-01

    The purpose of the current study is to determine biology student teachers' cognitive structures on the concept of microscope. Qualitative research methodology has been applied in the study. The data were collected from biology student teachers. Free word association test and drawing-writing test were used to collect data. The data collected were…

  15. Development of micro-four-point probe in a scanning tunneling microscope for in situ electrical transport measurement

    Energy Technology Data Exchange (ETDEWEB)

    Ge, Jian-Feng; Liu, Zhi-Long; Gao, Chun-Lei; Qian, Dong; Liu, Canhua, E-mail: canhualiu@sjtu.edu.cn, E-mail: jfjia@sjtu.edu.cn; Jia, Jin-Feng, E-mail: canhualiu@sjtu.edu.cn, E-mail: jfjia@sjtu.edu.cn [Key Laboratory of Artificial Structures and Quantum Control (Ministry of Education), Department of Physics and Astronomy, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240 (China)

    2015-05-15

    Electrons at surface may behave differently from those in bulk of a material. Multi-functional tools are essential in comprehensive studies on a crystal surface. Here, we developed an in situ microscopic four-point probe (4PP) transport measurement system on the basis of a scanning tunneling microscope (STM). In particular, convenient replacement between STM tips and micro-4PPs enables systematic investigations of surface morphology, electronic structure, and electrical transport property of a same sample surface. Performances of the instrument are demonstrated with high-quality STM images, tunneling spectra, and low-noise electrical I-V characteristic curves of a single-layer FeSe film grown on a conductive SrTiO{sub 3} surface.

  16. Development of micro-four-point probe in a scanning tunneling microscope for in situ electrical transport measurement.

    Science.gov (United States)

    Ge, Jian-Feng; Liu, Zhi-Long; Gao, Chun-Lei; Qian, Dong; Liu, Canhua; Jia, Jin-Feng

    2015-05-01

    Electrons at surface may behave differently from those in bulk of a material. Multi-functional tools are essential in comprehensive studies on a crystal surface. Here, we developed an in situ microscopic four-point probe (4PP) transport measurement system on the basis of a scanning tunneling microscope (STM). In particular, convenient replacement between STM tips and micro-4PPs enables systematic investigations of surface morphology, electronic structure, and electrical transport property of a same sample surface. Performances of the instrument are demonstrated with high-quality STM images, tunneling spectra, and low-noise electrical I-V characteristic curves of a single-layer FeSe film grown on a conductive SrTiO3 surface.

  17. Feature-point-extracting-based automatically mosaic for composite microscopic images

    Institute of Scientific and Technical Information of China (English)

    YIN YanSheng; ZHAO XiuYang; TIAN XiaoFeng; LI Jia

    2007-01-01

    Image mosaic is a crucial step in the three-dimensional reconstruction of composite materials to align the serial images. A novel method is adopted to mosaic two SiC/Al microscopic images with an amplification coefficient of 1000. The two images are denoised by Gaussian model, and feature points are then extracted by using Harris corner detector. The feature points are filtered through Canny edge detector. A 40x40 feature template is chosen by sowing a seed in an overlapped area of the reference image, and the homologous region in floating image is acquired automatically by the way of correlation analysis. The feature points in matched templates are used as feature point-sets. Using the transformational parameters acquired by SVD-ICP method, the two images are transformed into the universal coordinates and merged to the final mosaic image.

  18. Building Points - MO 2014 Barton Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  19. Building Points - MO 2014 Camden Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  20. Building Points - MO 2014 Dade Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  1. Building Points - MO 2014 Clark Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  2. Building Points - MO 2014 Audrain Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  3. Building Points - MO 2014 Bates Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  4. Building Points - MO 2014 Benton Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  5. Building Points - MO 2014 Butler Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  6. Building Points - MO 2014 Christian Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  7. Building Points - MO 2012 St. Francois Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed categorized points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  8. Building Points - MO 2012 St. Genevieve Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed categorized points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  9. Building Points - MO 2012 Perry Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed categorized points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  10. Building Points - MO 2012 Cape Girardeau Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed categorized points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  11. Building Points - MO 2012 Iron Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed categorized points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  12. Building Points - MO 2012 Madison Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed categorized points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  13. Building Points - MO 2012 Bollinger Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed categorized points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  14. Building Points - MO 2014 Andrew Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Staff at the Geographic Resources Center placed attributed points on all roofed structures visible at a scale of 1:2000 using MSDIS-DOQQ 2008 2-foot aerial imagery...

  15. Microscopic neural image registration based on the structure of mitochondria

    Science.gov (United States)

    Cao, Huiwen; Han, Hua; Rao, Qiang; Xiao, Chi; Chen, Xi

    2017-02-01

    Microscopic image registration is a key component of the neural structure reconstruction with serial sections of neural tissue. The goal of microscopic neural image registration is to recover the 3D continuity and geometrical properties of specimen. During image registration, various distortions need to be corrected, including image rotation, translation, tissue deformation et.al, which come from the procedure of sample cutting, staining and imaging. Furthermore, there is only certain similarity between adjacent sections, and the degree of similarity depends on local structure of the tissue and the thickness of the sections. These factors make the microscopic neural image registration a challenging problem. To tackle the difficulty of corresponding landmarks extraction, we introduce a novel image registration method for Scanning Electron Microscopy (SEM) images of serial neural tissue sections based on the structure of mitochondria. The ellipsoidal shape of mitochondria ensures that the same mitochondria has similar shape between adjacent sections, and its characteristic of broad distribution in the neural tissue guarantees that landmarks based on the mitochondria distributed widely in the image. The proposed image registration method contains three parts: landmarks extraction between adjacent sections, corresponding landmarks matching and image deformation based on the correspondences. We demonstrate the performance of our method with SEM images of drosophila brain.

  16. A general end point free energy calculation method based on microscopic configurational space coarse-graining

    CERN Document Server

    Tian, Pu

    2015-01-01

    Free energy is arguably the most important thermodynamic property for physical systems. Despite the fact that free energy is a state function, presently available rigorous methodologies, such as those based on thermodynamic integration (TI) or non-equilibrium work (NEW) analysis, involve energetic calculations on path(s) connecting the starting and the end macrostates. Meanwhile, presently widely utilized approximate end-point free energy methods lack rigorous treatment of conformational variation within end macrostates, and are consequently not sufficiently reliable. Here we present an alternative and rigorous end point free energy calculation formulation based on microscopic configurational space coarse graining, where the configurational space of a high dimensional system is divided into a large number of sufficiently fine and uniform elements, which were termed conformers. It was found that change of free energy is essentially decided by change of the number of conformers, with an error term that accounts...

  17. Conductivity of individual particles measured by a microscopic four-point-probe method.

    Science.gov (United States)

    Sun, Ling; Wang, Jianjun; Bonaccurso, Elmar

    2013-01-01

    We introduce a technique for measuring the conductivity of individual hybrid metal, semiconducting core-shell and full-metal conducting particles by a microscopic four-point probe (μ-4PP) method. The four-point probe geometry allows for minimizing contact resistances between electrodes and particles. By using a focused ion beam we fabricate platinum nanoleads between four microelectrodes on a silicon chip and an individual particle, and determine the particle's conductivity via sensitive current and voltage measurements. Up to sixteen particles can be taken up by each chip, which allows for multiple conductivity measurements by simply multiplexing the electric contacts connected to a multimeter. Although, for demonstration, we used full Au (conducting) and Ag-coated latex particles (semiconducting) of a few micrometers in diameter, the method can be applied to other types of conducting or semiconducting particles of different diameters.

  18. Reflective point-diffraction microscopic interferometer with long-term stability (Invited Paper)

    Institute of Scientific and Technical Information of China (English)

    Rongli Guo; Baoli Yao; Peng Gao; Junwei Min; Juanjuan Zheng; Tong Ye

    2011-01-01

    An on-axis phase-shifting reflective point-diffraction microscopic interferometer for quantitative phase microscopy based on Michelson architecture is proposed.A cube beamsplitter splits the object wave spectrum into two copies within two arms.Reference wave is rebuilt in one arm by low-pass filtering on the object wave frequency spectrum with a pinhole-mask mirror,and interferes with the object wave from the other arm.Polarization phase-shifting is performed and phase imaging on microscale specimens is implemented.The experimental results demonstrate that the proposed scheme has the advantage of long-term stability due to its quasi common-path geometry with full use of laser energv.%An on-axis phase-shifting reflective point-diffraction microscopic interferometer for quantitative phase microscopy based on Michelson architecture is proposed. A cube beamsplitter splits the object wave spectrum into two copies within two arms. Reference wave is rebuilt in one arm by low-pass filtering on the object wave frequency spectrum with a pinhole-mask mirror, and interferes with the object wave from the other arm. Polarization phase-shifting is performed and phase imaging on microscale specimens is implemented. The experimental results demonstrate that the proposed scheme has the advantage of long-term stability due to its quasi common-path geometry with full use of laser energy.

  19. Analysis of microscopic pore structures of rocks before and after water absorption

    Institute of Scientific and Technical Information of China (English)

    Li Dejian; Wang Guilian; Han Liqiang; Liu Peiyu; He Manchao; Yang Guoxing; Tai Qimin; Chen Cheng

    2011-01-01

    Hydrophilic characteristics of rocks are affected by their microscopic pore structures, which clearly change after water absorption. Water absorption tests and scanning electron microscopic (SEM) experiments on rock samples, located at a site in Tibet, China, were carried out. Changes of rock pore structures before and after water absorption were studied with the distribution of pore sizes and fractal characteristics of pores. The results show that surface porosities, fractal dimensions of pores and the complexity of pore structures increased because the number of new small pores produced increased or the original macropore flow channels were expanded after rocks absorbed water. There were points of inflection on their water absorption curves. After water absorption of other rocks, surface porosities and fractal dimensions of pores and complexity of pore structures decreased as the original pore flow channels became filled. Water absorption curves did not change. Surface porosity and the pore fractal dimensions of rocks have good linear relationships before and after water absorption.

  20. Investigation of structural change of purple membrane in storage by transmission electron microscope and atomic force microscope

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    The structural change of purple membrane during storage has been investigated by means of transmission electron microscope and atomic force microscope. It is found that many liposomes have spontaneously evolved from the purple membrane sheets isolated three years ago. The membrane proteins on the liposomes, bacteriorhodopsin, are still presented as trimers in 2-D hexagonal structure, which is the same as that in natural cell membrane. However, the cytoplasmic surface of purple membrane faced outside on the liposomes.

  1. The Interplay between Microscopic and Mesoscopic Structures in Complex Networks

    Science.gov (United States)

    Reichardt, Jörg; Alamino, Roberto; Saad, David

    2011-01-01

    Understanding a complex network's structure holds the key to understanding its function. The physics community has contributed a multitude of methods and analyses to this cross-disciplinary endeavor. Structural features exist on both the microscopic level, resulting from differences between single node properties, and the mesoscopic level resulting from properties shared by groups of nodes. Disentangling the determinants of network structure on these different scales has remained a major, and so far unsolved, challenge. Here we show how multiscale generative probabilistic exponential random graph models combined with efficient, distributive message-passing inference techniques can be used to achieve this separation of scales, leading to improved detection accuracy of latent classes as demonstrated on benchmark problems. It sheds new light on the statistical significance of motif-distributions in neural networks and improves the link-prediction accuracy as exemplified for gene-disease associations in the highly consequential Online Mendelian Inheritance in Man database. PMID:21829597

  2. The interplay between microscopic and mesoscopic structures in complex networks.

    Directory of Open Access Journals (Sweden)

    Jörg Reichardt

    Full Text Available Understanding a complex network's structure holds the key to understanding its function. The physics community has contributed a multitude of methods and analyses to this cross-disciplinary endeavor. Structural features exist on both the microscopic level, resulting from differences between single node properties, and the mesoscopic level resulting from properties shared by groups of nodes. Disentangling the determinants of network structure on these different scales has remained a major, and so far unsolved, challenge. Here we show how multiscale generative probabilistic exponential random graph models combined with efficient, distributive message-passing inference techniques can be used to achieve this separation of scales, leading to improved detection accuracy of latent classes as demonstrated on benchmark problems. It sheds new light on the statistical significance of motif-distributions in neural networks and improves the link-prediction accuracy as exemplified for gene-disease associations in the highly consequential Online Mendelian Inheritance in Man database.

  3. Microscopic structure and gas-gas critical line of the Ar-water system

    Energy Technology Data Exchange (ETDEWEB)

    Ricci, M.A. [Dipartimento di Fisica ' E. Amaldi' , Universita degli Studi ' Roma Tre' , Via della Vasca Navale 84, 00146 Rome (Italy)]. E-mail: riccim@fis.uniroma3.it; Mancinelli, R. [Dipartimento di Fisica ' E. Amaldi' , Universita degli Studi ' Roma Tre' , Via della Vasca Navale 84, 00146 Rome (Italy); Lu Russo, M. [ESRF, European Synchrotron Radiation Facility, 6 rue Jules Horowitz, BP 220, 38043 Grenoble (France); Botti, A. [Dipartimento di Fisica ' E. Amaldi' , Universita degli Studi ' Roma Tre' , Via della Vasca Navale 84, 00146 Rome (Italy); Bruni, F. [Dipartimento di Fisica ' E. Amaldi' , Universita degli Studi ' Roma Tre' , Via della Vasca Navale 84, 00146 Rome (Italy); Soper, A.K. [ISIS Facility, Rutherford Appleton Laboratory, Chilton, Didcot, Oxfordshire, OX11 0QX (United Kingdom)

    2006-11-15

    The dependence of the derivative of the gas-gas critical temperature on the microscopic structure of a mixture is analyzed using neutron diffraction on the Ar-water system at two solute concentrations. At low Ar concentration the critical line departs from the critical point of the solvent with negative derivative: at a microscopic level this corresponds to a repulsive solute-solvent interaction, keeping Ar atoms outside the first water-water neighboring shell. As the solute concentration increases at constant temperature and pressure, the critical temperature goes through a minimum and eventually Ar atoms enter the first neighbor water shell. At this point, no H-bonding between water molecules is visible.

  4. SPY: a new scission-point model based on microscopic inputs to predict fission fragment properties

    Energy Technology Data Exchange (ETDEWEB)

    Panebianco, Stefano; Lemaître, Jean-Francois; Sida, Jean-Luc [CEA Centre de Saclay, Gif-sur-Ivette (France); Dubray, Noëel [CEA, DAM, DIF, Arpajon (France); Goriely, Stephane [Institut d' Astronomie et d' Astrophisique, Universite Libre de Bruxelles, Brussels (Belgium)

    2014-07-01

    Despite the difficulty in describing the whole fission dynamics, the main fragment characteristics can be determined in a static approach based on a so-called scission-point model. Within this framework, a new Scission-Point model for the calculations of fission fragment Yields (SPY) has been developed. This model, initially based on the approach developed by Wilkins in the late seventies, consists in performing a static energy balance at scission, where the two fragments are supposed to be completely separated so that their macroscopic properties (mass and charge) can be considered as fixed. Given the knowledge of the system state density, averaged quantities such as mass and charge yields, mean kinetic and excitation energy can then be extracted in the framework of a microcanonical statistical description. The main advantage of the SPY model is the introduction of one of the most up-to-date microscopic descriptions of the nucleus for the individual energy of each fragment and, in the future, for their state density. These quantities are obtained in the framework of HFB calculations using the Gogny nucleon-nucleon interaction, ensuring an overall coherence of the model. Starting from a description of the SPY model and its main features, a comparison between the SPY predictions and experimental data will be discussed for some specific cases, from light nuclei around mercury to major actinides. Moreover, extensive predictions over the whole chart of nuclides will be discussed, with particular attention to their implication in stellar nucleosynthesis. Finally, future developments, mainly concerning the introduction of microscopic state densities, will be briefly discussed. (author)

  5. SPY: a new scission-point model based on microscopic inputs to predict fission fragment properties

    Science.gov (United States)

    Panebianco, Stefano; Dubray, Nöel; Goriely, Stéphane; Hilaire, Stéphane; Lemaître, Jean-François; Sida, Jean-Luc

    2014-04-01

    Despite the difficulty in describing the whole fission dynamics, the main fragment characteristics can be determined in a static approach based on a so-called scission-point model. Within this framework, a new Scission-Point model for the calculations of fission fragment Yields (SPY) has been developed. This model, initially based on the approach developed by Wilkins in the late seventies, consists in performing a static energy balance at scission, where the two fragments are supposed to be completely separated so that their macroscopic properties (mass and charge) can be considered as fixed. Given the knowledge of the system state density, averaged quantities such as mass and charge yields, mean kinetic and excitation energy can then be extracted in the framework of a microcanonical statistical description. The main advantage of the SPY model is the introduction of one of the most up-to-date microscopic descriptions of the nucleus for the individual energy of each fragment and, in the future, for their state density. These quantities are obtained in the framework of HFB calculations using the Gogny nucleon-nucleon interaction, ensuring an overall coherence of the model. Starting from a description of the SPY model and its main features, a comparison between the SPY predictions and experimental data will be discussed for some specific cases, from light nuclei around mercury to major actinides. Moreover, extensive predictions over the whole chart of nuclides will be discussed, with particular attention to their implication in stellar nucleosynthesis. Finally, future developments, mainly concerning the introduction of microscopic state densities, will be briefly discussed.

  6. SPY: a new scission-point model based on microscopic inputs to predict fission fragment properties

    Directory of Open Access Journals (Sweden)

    Panebianco Stefano

    2014-04-01

    Full Text Available Despite the difficulty in describing the whole fission dynamics, the main fragment characteristics can be determined in a static approach based on a so-called scission-point model. Within this framework, a new Scission-Point model for the calculations of fission fragment Yields (SPY has been developed. This model, initially based on the approach developed by Wilkins in the late seventies, consists in performing a static energy balance at scission, where the two fragments are supposed to be completely separated so that their macroscopic properties (mass and charge can be considered as fixed. Given the knowledge of the system state density, averaged quantities such as mass and charge yields, mean kinetic and excitation energy can then be extracted in the framework of a microcanonical statistical description. The main advantage of the SPY model is the introduction of one of the most up-to-date microscopic descriptions of the nucleus for the individual energy of each fragment and, in the future, for their state density. These quantities are obtained in the framework of HFB calculations using the Gogny nucleon-nucleon interaction, ensuring an overall coherence of the model. Starting from a description of the SPY model and its main features, a comparison between the SPY predictions and experimental data will be discussed for some specific cases, from light nuclei around mercury to major actinides. Moreover, extensive predictions over the whole chart of nuclides will be discussed, with particular attention to their implication in stellar nucleosynthesis. Finally, future developments, mainly concerning the introduction of microscopic state densities, will be briefly discussed.

  7. Point-of-care quantification of blood-borne filarial parasites with a mobile phone microscope.

    Science.gov (United States)

    D'Ambrosio, Michael V; Bakalar, Matthew; Bennuru, Sasisekhar; Reber, Clay; Skandarajah, Arunan; Nilsson, Lina; Switz, Neil; Kamgno, Joseph; Pion, Sébastien; Boussinesq, Michel; Nutman, Thomas B; Fletcher, Daniel A

    2015-05-06

    Parasitic helminths cause debilitating diseases that affect millions of people in primarily low-resource settings. Efforts to eliminate onchocerciasis and lymphatic filariasis in Central Africa through mass drug administration have been suspended because of ivermectin-associated serious adverse events, including death, in patients infected with the filarial parasite Loa loa. To safely administer ivermectin for onchocerciasis or lymphatic filariasis in regions co-endemic with L. loa, a strategy termed "test and (not) treat" has been proposed whereby those with high levels of L. loa microfilariae (>30,000/ml) that put them at risk for life-threatening serious adverse events are identified and excluded from mass drug administration. To enable this, we developed a mobile phone-based video microscope that automatically quantifies L. loa microfilariae in whole blood loaded directly into a small glass capillary from a fingerprick without the need for conventional sample preparation or staining. This point-of-care device automatically captures and analyzes videos of microfilarial motion in whole blood using motorized sample scanning and onboard motion detection, minimizing input from health care workers and providing a quantification of microfilariae per milliliter of whole blood in under 2 min. To validate performance and usability of the mobile phone microscope, we tested 33 potentially Loa-infected patients in Cameroon and confirmed that automated counts correlated with manual thick smear counts (94% specificity; 100% sensitivity). Use of this technology to exclude patients from ivermectin-based treatment at the point of care in Loa-endemic regions would allow resumption/expansion of mass drug administration programs for onchocerciasis and lymphatic filariasis in Central Africa. Copyright © 2015, American Association for the Advancement of Science.

  8. Microscopic structure and properties of wood-based foaming composites

    Institute of Scientific and Technical Information of China (English)

    Zheng WANG; Li GAO; Guilan ZHANG; Liang CHANG

    2008-01-01

    In order to reduce the density of wood-based composites without causing a deterioration of their mech-anical properties, we studied the process of manufacturing wood-based composites. A combination of polymer foaming technology and flat hot-pressing technology was used. The microscopic structure of the various wood-based composites was analyzed with a scanning electron microscope (SEM). Modulus of rupture (MOR), modulus of elasticity (MOE), impact strength, and thickness expansion rate of water sorption (TS) were all measured. The results showed that fibers loosely inter-weave, and fibers had been connected by micropore. They also showed that spaces between fibers had big micropore structure. MOR, MOE and impact strength were the high-est among three levels of ratio. When the total content of resin and foaming agent were 20% by weight, TS was higher. A hot-pressing temperature of 120℃ was optimal. At the low temperatures of 80℃, the foaming process was uncompleted. At a higher temperature, micropores burst at a certain pressure. Based on the variance analysis and maximum difference analysis, a significance test shows that the optimum conditions for the total content of resin and foaming agent is 20% by weight, with a hot pressing temperature of 120℃ for 15 min. Under these conditions, the properties of wood-based foaming composites all achieved the industry standard.

  9. Membrane Characterization by Microscopic and Scattering Methods: Multiscale Structure

    Directory of Open Access Journals (Sweden)

    Philippe Moulin

    2011-04-01

    Full Text Available Several microscopic and scattering techniques at different observation scales (from atomic to macroscopic were used to characterize both surface and bulk properties of four new flat-sheet polyethersulfone (PES membranes (10, 30, 100 and 300 kDa and new 100 kDa hollow fibers (PVDF. Scanning Electron Microscopy (SEM with “in lens” detection was used to obtain information on the pore sizes of the skin layers at the atomic scale. White Light Interferometry (WLI and Atomic Force Microscopy (AFM using different scales (for WLI: windows: 900 × 900 µm2 and 360 × 360 µm2; number of points: 1024; for AFM: windows: 50 × 50 µm2 and 5 × 5 µm2; number of points: 512 showed that the membrane roughness increases markedly with the observation scale and that there is a continuity between the different scan sizes for the determination of the RMS roughness. High angular resolution ellipsometric measurements were used to obtain the signature of each cut-off and the origin of the scattering was identified as coming from the membrane bulk.

  10. Membrane characterization by microscopic and scattering methods: multiscale structure.

    Science.gov (United States)

    Tamime, Rahma; Wyart, Yvan; Siozade, Laure; Baudin, Isabelle; Deumie, Carole; Glucina, Karl; Moulin, Philippe

    2011-04-13

    Several microscopic and scattering techniques at different observation scales (from atomic to macroscopic) were used to characterize both surface and bulk properties of four new flat-sheet polyethersulfone (PES) membranes (10, 30, 100 and 300 kDa) and new 100 kDa hollow fibers (PVDF). Scanning Electron Microscopy (SEM) with "in lens" detection was used to obtain information on the pore sizes of the skin layers at the atomic scale. White Light Interferometry (WLI) and Atomic Force Microscopy (AFM) using different scales (for WLI: windows: 900 × 900 µm2 and 360 × 360 µm2; number of points: 1024; for AFM: windows: 50 × 50 µm2 and 5 × 5 µm2; number of points: 512) showed that the membrane roughness increases markedly with the observation scale and that there is a continuity between the different scan sizes for the determination of the RMS roughness. High angular resolution ellipsometric measurements were used to obtain the signature of each cut-off and the origin of the scattering was identified as coming from the membrane bulk.

  11. Microscopic origin of the '0.7-anomaly' in quantum point contacts.

    Science.gov (United States)

    Bauer, Florian; Heyder, Jan; Schubert, Enrico; Borowsky, David; Taubert, Daniela; Bruognolo, Benedikt; Schuh, Dieter; Wegscheider, Werner; von Delft, Jan; Ludwig, Stefan

    2013-09-05

    Quantum point contacts are narrow, one-dimensional constrictions usually patterned in a two-dimensional electron system, for example by applying voltages to local gates. The linear conductance of a point contact, when measured as function of its channel width, is quantized in units of GQ = 2e(2)/h, where e is the electron charge and h is Planck's constant. However, the conductance also has an unexpected shoulder at ∼0.7GQ, known as the '0.7-anomaly', whose origin is still subject to debate. Proposed theoretical explanations have invoked spontaneous spin polarization, ferromagnetic spin coupling, the formation of a quasi-bound state leading to the Kondo effect, Wigner crystallization and various treatments of inelastic scattering. However, explicit calculations that fully reproduce the various experimental observations in the regime of the 0.7-anomaly, including the zero-bias peak that typically accompanies it, are still lacking. Here we offer a detailed microscopic explanation for both the 0.7-anomaly and the zero-bias peak: their common origin is a smeared van Hove singularity in the local density of states at the bottom of the lowest one-dimensional subband of the point contact, which causes an anomalous enhancement in the Hartree potential barrier, the magnetic spin susceptibility and the inelastic scattering rate. We find good qualitative agreement between theoretical calculations and experimental results on the dependence of the conductance on gate voltage, magnetic field, temperature, source-drain voltage (including the zero-bias peak) and interaction strength. We also clarify how the low-energy scale governing the 0.7-anomaly depends on gate voltage and interactions. For low energies, we predict and observe Fermi-liquid behaviour similar to that associated with the Kondo effect in quantum dots. At high energies, however, the similarities between the 0.7-anomaly and the Kondo effect end.

  12. Structural Fingerprinting of Nanocrystals in the Transmission Electron Microscope

    Science.gov (United States)

    Rouvimov, Sergei; Plachinda, Pavel; Moeck, Peter

    2010-03-01

    Three novel strategies for the structurally identification of nanocrystals in a transmission electron microscope are presented. Either a single high-resolution transmission electron microscopy image [1] or a single precession electron diffractogram (PED) [2] may be employed. PEDs from fine-grained crystal powders may also be utilized. Automation of the former two strategies is in progress and shall lead to statistically significant results on ensembles of nanocrystals. Open-access databases such as the Crystallography Open Database which provides more than 81,500 crystal structure data sets [3] or its mainly inorganic and educational subsets [4] may be utilized. [1] http://www.scientificjournals.org/journals 2007/j/of/dissertation.htm [2] P. Moeck and S. Rouvimov, in: {Drugs and the Pharmaceutical Sciences}, Vol. 191, 2009, 270-313 [3] http://cod.ibt.lt, http://www.crystallography.net, http://cod.ensicaen.fr, http://nanocrystallography.org, http://nanocrystallography.net, http://journals.iucr.org/j/issues/2009/04/00/kk5039/kk5039.pdf [4] http://nanocrystallography.research.pdx.edu/CIF-searchable

  13. The microscopic structure of cold aqueous methanol mixtures

    Science.gov (United States)

    Požar, Martina; Kerasidou, Ariadni; Lovrinčević, Bernarda; Zoranić, Larisa; Mijaković, Marijana; Primorac, Tomislav; Sokolić, Franjo; Teboul, Victor; Perera, Aurélien

    2016-10-01

    The evolution of the micro-segregated structure of aqueous methanol mixtures, in the temperature range 300 K-120 K, is studied with computer simulations, from the static structural point of view. The structural heterogeneity of water is reinforced at lower temperatures, as witnessed by a pre-peak in the oxygen-oxygen structure factor. Water tends to form predominantly chain-like clusters at lower temperatures and smaller concentrations. Methanol domains have essentially the same chain-like cluster structure as the pure liquid at high concentrations and becomes monomeric at smaller ones. Concentration fluctuations decrease with temperature, leading to quasi-ideal Kirkwood-Buff integrals, despite the enhanced molecular interactions, which we interpret as the signature of non-interacting segregated water and methanol clusters. This study throws a new light on the nature of the micro-heterogeneous structure of this mixture: the domain segregation is essentially based on the appearance of linear water clusters, unlike other alcohol aqueous mixtures, such as with propanol or butanol, where the water domains are more bulky.

  14. Microscopical Studies of Structural and Electronic Properties of Semiconductors

    CERN Multimedia

    2002-01-01

    The electronic and structural properties of point defects in semiconductors, e.g. radiation defects, impurities or passivating defects can excellently be studied by the hyperfine technique of Perturbed Angular Correlation (PAC). The serious limitation of this method, the small number of chemically different radioactive PAC probe atoms can be widely overcome by means of ISOLDE. Providing shortliving isotopes, which represent common dopants as well as suitable PAC probe atoms, the ISOLDE facility enables a much broader application of PAC to problems in semiconductor physics.\\\\ Using the probe atom $^{111m}$ Cd , the whole class of III-V compounds becomes accessible for PAC investigations. First successful experiments in GaAs, InP and GaP have been performed, concerning impurity complex formation and plasma induced defects. In Si and Ge, the electronic properties~-~especially their influence on acceptor-donor interaction~-~could be exemplarily st...

  15. Microscopic characterization of defect structure in RDX crystals

    NARCIS (Netherlands)

    Bouma, R.H.B.; Duvalois, W.; Heijden, A.E.D.M. van der

    2013-01-01

    Three batches of the commercial energetic material RDX, as received from various production locations and differing in sensitivity towards shock initiation, have been characterized with different microscopic techniques in order to visualize the defect content in these crystals. The RDX crystals are

  16. Characterization of quantum well structures using a photocathode electron microscope

    Science.gov (United States)

    Spencer, Michael G.; Scott, Craig J.

    1989-01-01

    Present day integrated circuits pose a challenge to conventional electronic and mechanical test methods. Feature sizes in the submicron and nanometric regime require radical approaches in order to facilitate electrical contact to circuits and devices being tested. In addition, microwave operating frequencies require careful attention to distributed effects when considering the electrical signal paths within and external to the device under test. An alternative testing approach which combines the best of electrical and optical time domain testing is presented, namely photocathode electron microscope quantitative voltage contrast (PEMQVC).

  17. Note: a simple approach to fabricate a microscopic four-point probe for conductivity measurements in ultrahigh vacuum.

    Science.gov (United States)

    Pang, Fei; Liang, Xuejin; Chen, Dongmin

    2013-07-01

    We present a simple method to fabricate microscopic four-point probe (M4PP) with spacing of 70-100 μm for conductivity measurements in ultrahigh vacuum. The probe includes four gold wires with 30 μm diameter and a 0.5 mm thickness sapphire slice as cantilever. One of the dual scanning tunneling microscope (DSTM) is replaced by M4PP. As a result, in situ transport measurement could be performed by M4PP and investigation of surface morphology by STM. Finally, we measure conductivity of 14 monolayer Bi(111) epitaxial film on n type Si which is 1.6 × 10(-3) Ω(-1)∕[larger open square].

  18. Building Points - MO 2011 Lincoln Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — MSDIS staff identified and located all ?binary? structures and compiled them into a spatial database. Annual review and maintenance of the database will occur with...

  19. Building Points - MO 2012 Revised Boone Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — MSDIS staff provided project management and worked with the Mid-MO RPC to locate "structures" within their region. MSDIS staff identified and located all “binary”...

  20. Building Points - MO 2011 Warren Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — MSDIS staff identified and located all ?binary? structures and compiled them into a spatial database. Annual review and maintenance of the database will occur with...

  1. Building Points - MO 2011 Montgomery Structure Points (SHP)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — MSDIS staff identified and located all ?binary? structures and compiled them into a spatial database. Annual review and maintenance of the database will occur with...

  2. Micro-four-point probes in a UHV scanning electron microscope for in-situ surface-conductivity measurements

    DEFF Research Database (Denmark)

    Shiraki, I.; Nagao, T.; Hasegawa, S.;

    2000-01-01

    For in-situ measurements of surface conductivity in ultrahigh vacuum (UHV), we have installed micro-four-point probes (probe spacings down to 4 mum) in a UHV scanning electron microscope (SEM) combined with scanning reflection-high-energy electron diffraction (RHEED). With the aid of piezoactuators...... for precise positioning of the probes, local conductivity of selected surface domains of well-defined superstructures could be measured during SEM and RHEED observations. It was found that the surface sensitivity of the conductivity measurements was enhanced by reducing the probe spacing, enabling...

  3. Twelve-point scale grading system of scanning electron microscopic examination to investigate subtle changes in damaged hair surface.

    Science.gov (United States)

    Lee, S Y; Choi, A R; Baek, J H; Kim, H O; Shin, M K; Koh, J S

    2016-11-01

    To assess the hair surface condition, scanning electron microscope (SEM) is commonly used and it remains an indispensable hair morphology characterization technique. Yet, the technique is criticized for having subjective viewpoints and limitations in distinguishing the appearance of cuticle layers. The aim of this study is to establish an objective classification system and also to subdivide by detailed description of damaged cuticle layers. Hair samples were collected from female subjects (n = 500) who participated in hair efficacy study and Asian hair bunches (n = 180) that were previously collected. Damage to hair was initiated by chemical, heat stress and ultraviolet irradiation. We suggested the grading criterion on a 12-point scale and compared with a wide range grading system on a 5-point scale. We evaluated other hair surface-related parameters such as hair luster-ring and combing load to verify the validity and efficacy of our new grading system. The grading criterion on our 12-point scale revealed an improved discrimination compared to the wide range grading system. Hair surface-related parameters were significantly improved after hair care product, and these tendencies were likely to be determined to be similarly improved using the 12-point scale grading system. The 12-point scale classification system was demonstrated to be a more precise standardization and appropriate evaluation method to investigate the subtle distinction of the hair shaft after hair care product application. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  4. A sequential point process model and Bayesian inference for spatial point patterns with linear structures

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    points is such that the dependent cluster point is likely to occur closely to a previous cluster point. We demonstrate the flexibility of the model for producing point patterns with linear structures, and propose to use the model as the likelihood in a Bayesian setting when analyzing a spatial point...

  5. Developments of the teaching material and the teaching tool Structure and Performance of the handmade Microscope

    OpenAIRE

    竹下, 俊治; 向, 平和

    2011-01-01

    In the present study, five types of handmade microscopes were developed for the basic tool of the biology class. They were the paste lens type, the glass bead type, the marble-magnifier type, the loupe-loupe type and the paper craft type. Most of the materials of these microscopes were able to obtain from the Do-it-yourself stores or the miscellaneous daily goods stores. The processes of making microscopes are effective teaching materials for understanding about structure and function of the ...

  6. A sequential point process model and Bayesian inference for spatial point patterns with linear structures

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    We introduce a flexible spatial point process model for spatial point patterns exhibiting linear structures, without incorporating a latent line process. The model is given by an underlying sequential point process model, i.e. each new point is generated given the previous points. Under this model...... the points can be of one of three types: a ‘background point’, an ‘independent cluster point’, or a ‘dependent cluster point’. The background and independent cluster points are thought to exhibit ‘complete spatial randomness’, while the conditional distribution of a dependent cluster point given the previous...... points is such that the dependent cluster point is likely to occur closely to a previous cluster point. We demonstrate the flexibility of the model for producing point patterns with linear structures, and propose to use the model as the likelihood in a Bayesian setting when analyzing a spatial point...

  7. Scattering Amplitudes: The Most Perfect Microscopic Structures in the Universe

    Energy Technology Data Exchange (ETDEWEB)

    Dixon, Lance J.; /CERN /SLAC

    2011-11-04

    This article gives an overview of many of the recent developments in understanding the structure of relativistic scattering amplitudes in gauge theories ranging from QCD to N = 4 super-Yang-Mills theory, as well as (super)gravity. I also provide a pedagogical introduction to some of the basic tools used to organize and illuminate the color and kinematic structure of amplitudes. This article is an invited review introducing a special issue of Journal of Physics A devoted to 'Scattering Amplitudes in Gauge Theories'.

  8. Removal of Vesicle Structures from Transmission Electron Microscope Images

    DEFF Research Database (Denmark)

    Jensen, Katrine Hommelhoff; Sigworth, Fred; Brandt, Sami Sebastian

    2015-01-01

    In this paper, we address the problem of imaging membrane proteins for single-particle cryo-electron microscopy reconstruction of the isolated protein structure. More precisely, we propose a method for learning and removing the interfering vesicle signals from the micrograph, prior to reconstruct...

  9. Ions in water: the microscopic structure of concentrated hydroxide solutions.

    Science.gov (United States)

    Imberti, S; Botti, A; Bruni, F; Cappa, G; Ricci, M A; Soper, A K

    2005-05-15

    Neutron-diffraction data on aqueous solutions of hydroxides, at solute concentrations ranging from 1 solute per 12 water molecules to 1 solute per 3 water molecules, are analyzed by means of a Monte Carlo simulation (empirical potential structure refinement), in order to determine the hydration shell of the OH- in the presence of the smaller alkali metal ions. It is demonstrated that the symmetry argument between H+ and OH- cannot be used, at least in the liquid phase at such high concentrations, for determining the hydroxide hydration shell. Water molecules in the hydration shell of K+ orient their dipole moment at about 45 degrees from the K+-water oxygen director, instead of radially as in the case of the Li+ and Na+ hydration shells. The K+-water oxygen radial distribution function shows a shallower first minimum compared to the other cation-water oxygen functions. The influence of the solutes on the water-water radial distribution functions is shown to have an effect on the water structure equivalent to an increase in the pressure of the water, depending on both ion concentration and ionic radius. The changes of the water structure in the presence of charged solutes and the differences among the hydration shells of the different cations are used to present a qualitative explanation of the observed cation mobility.

  10. Precession electron diffraction and its utility for structural fingerprinting in the transmission electron microscope

    Science.gov (United States)

    Moeck, Peter; Rouvimov, Sergei; Nicolopoulos, Stavros

    2009-09-01

    Precession electron diffraction (PED) in a transmission electron microscope (TEM) is discussed in order to illustrate its utility for structural fingerprinting of nanocrystals. While individual nanocrystals may be fingerprinted structurally from PED spot patterns, ensembles of nanocrystals may be fingerprinted from powder PED ring patterns.

  11. Microscopic structure of charge-exchange spin-isospin modes through decay measurements

    NARCIS (Netherlands)

    Harakeh, M.N.

    1998-01-01

    The study of particle decay of charge-exchange giant resonances (CEGR) furnishes information on their microscopic structure. Furthermore, gamma decay of CEGR call help to unravel their structure. For example, the gamma-decay of the Gamow-Teller (GT) resonance to the isobaric analogue state (IAS) poi

  12. Reflection of resonant light from a plane surface of an ensemble of motionless point scatters: Quantum microscopic approach

    CERN Document Server

    Kuraptsev, A S

    2016-01-01

    On the basis of general theoretical results developed previously in [JETP 112, 246 (2011)], we analyze the reflection of quasiresonant light from a plane surface of dense and disordered ensemble of motionless point scatters. Angle distribution of the scattered light is calculated both for s and p polarizations of the probe radiation. The ratio between coherent and incoherent (diffuse) components of scattered light is calculated. We analyze the contributions of scatters located at different distances from the surface and determine on this background the thickness of surface layer responsible for reflected beam generation. The inhomogeneity of dipole-dipole interaction near the surface is discussed.We study also dependence of total reflected light power on the incidence angle and compare the results of the microscopic approach with predictions of the Fresnel reflection theory. The calculations are performed for different densities of scatters and different frequencies of a probe radiation.

  13. Conductivity anisotropy helps to reveal the microscopic structure of a density wave at imperfect nesting

    Science.gov (United States)

    Grigoriev, P. D.; Kostenko, S. S.

    2015-03-01

    Superconductivity or metallic state may coexist with density wave ordering at imperfect nesting of the Fermi surface. In addition to the macroscopic spatial phase separation, there are, at least, two possible microscopic structures of such coexistence: (i) the soliton-wall phase and (ii) the ungapped Fermi-surface pockets. We show that the conductivity anisotropy allows us to distinguish these two microscopic density-wave structures. The results obtained may help to analyze the experimental observations in layered organic metals (TMTSF)2PF6, (TMTSF)2ClO4, α-(BEDT-TTF)2KHg(SCN)4 and in other compounds.

  14. Conductivity anisotropy helps to reveal the microscopic structure of a density wave at imperfect nesting

    Energy Technology Data Exchange (ETDEWEB)

    Grigoriev, P.D., E-mail: grigorev@itp.ac.ru [L.D. Landau Institute for Theoretical Physics, Chernogolovka 142432 (Russian Federation); Institut Laue-Langevin, Grenoble (France); Kostenko, S.S. [Institute of Problems of Chemical Physics, 142432 Chernogolovka (Russian Federation)

    2015-03-01

    Superconductivity or metallic state may coexist with density wave ordering at imperfect nesting of the Fermi surface. In addition to the macroscopic spatial phase separation, there are, at least, two possible microscopic structures of such coexistence: (i) the soliton-wall phase and (ii) the ungapped Fermi-surface pockets. We show that the conductivity anisotropy allows us to distinguish these two microscopic density-wave structures. The results obtained may help to analyze the experimental observations in layered organic metals (TMTSF){sub 2}PF{sub 6}, (TMTSF){sub 2}ClO{sub 4}, α-(BEDT-TTF){sub 2}KHg(SCN){sub 4} and in other compounds.

  15. Critical-Point Structure in Finite Nuclei

    CERN Document Server

    Leviatan, A

    2006-01-01

    Properties of quantum shape-phase transitions in finite nuclei are considered in the framework of the interacting boson model. Special emphasis is paid to the dynamics at the critical-point of a general first-order phase transition.

  16. Multiwalled carbon nanotubes and dispersed nanodiamond novel hybrids: Microscopic structure evolution, physical properties, and radiation resilience

    Science.gov (United States)

    Gupta, S.; Farmer, J.

    2011-01-01

    We report the structure and physical properties of novel hybrids of multiwalled carbon nanotubes (MWCNTs) and ultradispersed diamond (UDD) forming nanocomposite ensemble that were subjected to 50, 100, and 103 kGy gamma ray doses and characterized using various analytical tools to investigate hierarchical defects evolution. This work is prompted by recent work on single-walled CNTs and UDD ensemble [Gupta et al., J. Appl. Phys. 107, 104308 (2010)] where radiation-induced microscopic defects seem to be stabilized by UDD. The present experiments show similar effects where these hybrids display only a minimal structural modification under the maximum dose. Quantitative analyses of multiwavelength Raman spectra revealed lattice defects induced by irradiation assessed through the variation in prominent D, G, and 2D bands. A minimal change in the position of D, G, and 2D bands and a marginal increase in intensity of the defect-induced double resonant Raman scattered D and 2D bands are some of the implications suggesting the radiation coupling. The in-plane correlation length (La) was also determined following Tunistra-Koenig relation from the ratio of D to G band (ID/IG) besides microscopic stress. However, we also suggest the following taking into account of intrinsic defects of the constituents: (a) charge transfer arising at the interface due to the difference in electronegativity of MWCNT C sp2 and UDD core (C sp3) leading to phonon and electron energy renormalization; (b) misorientation of C sp2 at the interface of MWCNT and UDD shell (C sp2) resulting in structural disorder; (c) softening or violation of the q ˜0 selection rule leading to D band broadening and a minimal change in G band intensity; and (d) normalized intensity of D and G bands with 2D band help to distinguish defect-induced double resonance phenomena. The MWCNT when combined with nanodiamond showed a slight decrease in their conductance further affected by irradiation pointing at relatively good

  17. A sequential point process model and Bayesian inference for spatial point patterns with linear structures

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    2012-01-01

    point’ an ‘independent cluster point’ or a ‘dependent cluster point’. The background and independent cluster points are thought to exhibit ‘complete spatial randomness’, whereas the dependent cluster points are likely to occur close to previous cluster points. We demonstrate the flexibility of the model......We introduce a flexible spatial point process model for spatial point patterns exhibiting linear structures, without incorporating a latent line process. The model is given by an underlying sequential point process model. Under this model, the points can be of one of three types: a ‘background...

  18. On the Concept "Microscope": Biology Student Teachers' Cognitive Structure

    Science.gov (United States)

    Kurt, Hakan; Ekici, Gulay; Aktas, Murat; Aksu, Ozlem

    2013-01-01

    The purpose of the current study is to determine biology student teachers' cognitive structures on the concept of microscope. Qualitative research methodology has been applied in the study. The data were collected from biology student teachers. Free word association test and drawing-writing test were used to collect data. The data collected…

  19. Enhanced Strain in Functional Nanoporous Gold with a Dual Microscopic Length Scale Structure

    NARCIS (Netherlands)

    Detsi, Eric; Punzhin, Sergey; Rao, Jiancun; Onck, Patrick R.; De Hosson, Jeff Th. M.

    2012-01-01

    We have synthesized nanoporous Au with a dual microscopic length scale by exploiting the crystal structure of the alloy precursor. The synthesized mesoscopic material is characterized by stacked Au layers of submicrometer thickness. In addition, each layer displays nanoporosity through the entire bu

  20. Vegetation reconstruction of Bronze Age by using microscopic structure of charcoals

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The microscopic structure of charcoals was determined in two sites of Bronze Age, Chifeng area by using the scanning electronic microscope. The results showed that these charcoals are all timbers of Mongolian oak (Quercus mongolica). It has powerful climatic indicative significance. Based on the assemblage of pollen composition, their eco-climatic index and character of community, the vegetation reconstruction of Bronze Age was obtained. The reconstruction showed that the zonal vegetation was Mongolian oak forest and Chinese pine forest in the loess hills in the Chifeng area, which suggested that the climatic condition was warmer and wetter at that time than present time.

  1. Microscopic structures of ionic liquids 1-ethyl-3-methylimidazolium tetrafluoroborate in water probed by the relative chemical shift

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    The relative chemical shifts (△δ) △δwere put forward to investigate the microscopic structure of 1-ethyl-3-methyl-imidazolium tetrafluoroborate (EmimBF4) during the dilution process with water.The concentration-dependent △δ(C2)H-(C4)H,△δ(C2)H-(C5)H and △δ(C4)H-(C5)H were analyzed.The results reveal that the variations of the microscopic structures of three aromatic protons are inconsistent.The strength of the H-bond between water and three aromatic protons follows the order:(C2)H···O > (C4)H···O > (C5)H···O.The concentration-dependent △δ(C6)H-(C7)H and △δ(C6)H-(C8)H indicate the formation of the H-bonds of (Calkyl)H···O is impossible,and more water is located around (C6)H than around (C7)H or (C8)H.The concentration-dependent △δ(C2)H-(C4)H and △δ(C2)H-(C5)H both increase rapidly when xwater > 0.9 or so,suggesting the ionic pairs of EmimBF4 are dissociated rapidly.The turning points of concentration-dependent △δ(C2)H-(C4)H and △δ(C2)H-(C5)H indicate that some physical properties of the EmimBF4/water mixtures also change at the corresponding concentration point.The microscopic structures of EmimBF4 in water could be clearly detected by the relative chemical shifts.

  2. Imaging the Microscopic Structure of Shear Thinning and Thickening Colloidal Suspensions

    KAUST Repository

    Cheng, X.

    2011-09-01

    The viscosity of colloidal suspensions varies with shear rate, an important effect encountered in many natural and industrial processes. Although this non-Newtonian behavior is believed to arise from the arrangement of suspended particles and their mutual interactions, microscopic particle dynamics are difficult to measure. By combining fast confocal microscopy with simultaneous force measurements, we systematically investigate a suspension\\'s structure as it transitions through regimes of different flow signatures. Our measurements of the microscopic single-particle dynamics show that shear thinning results from the decreased relative contribution of entropic forces and that shear thickening arises from particle clustering induced by hydrodynamic lubrication forces. This combination of techniques illustrates an approach that complements current methods for determining the microscopic origins of non-Newtonian flow behavior in complex fluids.

  3. Lab-on-DVD: standard DVD drives as a novel laser scanning microscope for image based point of care diagnostics.

    Science.gov (United States)

    Ramachandraiah, Harisha; Amasia, Mary; Cole, Jackie; Sheard, Paul; Pickhaver, Simon; Walker, Chris; Wirta, Valtteri; Lexow, Preben; Lione, Richard; Russom, Aman

    2013-04-21

    We present a novel "Lab-on-DVD" system and demonstrate its capability for rapid and low-cost HIV diagnostics by counting CD4+ cells isolated from whole blood. We show that a commercial DVD drive can, with certain modifications, be turned into an improved DVD-based laser scanning microscope (DVD-LSM). The system consists of a multi-layered disposable polymer disc and a modified commercial DVD reader with rotational control for sample handling, temperature control for optimized bioassay, a photodiode array for detection, and software for signal processing and user interface - all the necessary components required for a truly integrated lab-on-a-chip system, with the capability to deliver high-resolution images down to 1 μm in size. Using discs modified with antibodies, we specifically captured CD4+ cells from whole blood, demonstrating single cell resolution imaging. The novel integrated DVD platform with sub-micron image resolution brings, for the first time, affordable cellular diagnostic testing to the point-of-care and should be readily applicable at resource-limited settings.

  4. A miniaturized, high frequency mechanical scanner for high speed atomic force microscope using suspension on dynamically determined points

    Energy Technology Data Exchange (ETDEWEB)

    Herfst, Rodolf; Dekker, Bert; Witvoet, Gert; Crowcombe, Will; Lange, Dorus de [Department of Optomechatronics, Netherlands Organization for Applied Scientific Research, TNO, Delft (Netherlands); Sadeghian, Hamed, E-mail: hamed.sadeghianmarnani@tno.nl, E-mail: h.sadeghianmarnani@tudelft.nl [Department of Optomechatronics, Netherlands Organization for Applied Scientific Research, TNO, Delft (Netherlands); Department of Precision and Microsystems Engineering, Delft University of Technology, Delft (Netherlands)

    2015-11-15

    One of the major limitations in the speed of the atomic force microscope (AFM) is the bandwidth of the mechanical scanning stage, especially in the vertical (z) direction. According to the design principles of “light and stiff” and “static determinacy,” the bandwidth of the mechanical scanner is limited by the first eigenfrequency of the AFM head in case of tip scanning and by the sample stage in terms of sample scanning. Due to stringent requirements of the system, simply pushing the first eigenfrequency to an ever higher value has reached its limitation. We have developed a miniaturized, high speed AFM scanner in which the dynamics of the z-scanning stage are made insensitive to its surrounding dynamics via suspension of it on specific dynamically determined points. This resulted in a mechanical bandwidth as high as that of the z-actuator (50 kHz) while remaining insensitive to the dynamics of its base and surroundings. The scanner allows a practical z scan range of 2.1 μm. We have demonstrated the applicability of the scanner to the high speed scanning of nanostructures.

  5. A miniaturized, high frequency mechanical scanner for high speed atomic force microscope using suspension on dynamically determined points.

    Science.gov (United States)

    Herfst, Rodolf; Dekker, Bert; Witvoet, Gert; Crowcombe, Will; de Lange, Dorus; Sadeghian, Hamed

    2015-11-01

    One of the major limitations in the speed of the atomic force microscope (AFM) is the bandwidth of the mechanical scanning stage, especially in the vertical (z) direction. According to the design principles of "light and stiff" and "static determinacy," the bandwidth of the mechanical scanner is limited by the first eigenfrequency of the AFM head in case of tip scanning and by the sample stage in terms of sample scanning. Due to stringent requirements of the system, simply pushing the first eigenfrequency to an ever higher value has reached its limitation. We have developed a miniaturized, high speed AFM scanner in which the dynamics of the z-scanning stage are made insensitive to its surrounding dynamics via suspension of it on specific dynamically determined points. This resulted in a mechanical bandwidth as high as that of the z-actuator (50 kHz) while remaining insensitive to the dynamics of its base and surroundings. The scanner allows a practical z scan range of 2.1 μm. We have demonstrated the applicability of the scanner to the high speed scanning of nanostructures.

  6. Sub-diffuse structured light imaging provides macroscopic maps of microscopic tissue structure (Conference Presentation)

    Science.gov (United States)

    Kanick, Stephen C.

    2016-03-01

    The onset and progression of cancer introduces changes to the intra-cellular ultrastructural components and to the morphology of the extracellular matrix. While previous work has shown that localized scatter imaging is sensitive to pathology-induced differences in these aspects of tissue microstructure, wide adaptation this knowledge for surgical guidance is limited by two factors. First, the time required to image with confocal-level localization of the remission signal can be substantial. Second, localized (i.e. sub-diffuse) scatter remission intensity is influenced interchangeably by parameters that define scattering frequency and anisotropy. This similarity relationship must be carefully considered in order to obtain unique estimates of biomarkers that define either the scatter density or features that describe the distribution (e.g. shape, size, and orientation) of scatterers. This study presents a novel approach that uses structured light imaging to address both of these limitations. Monte Carlo data were used to model the reflectance intensity over a wide range of spatial frequencies, reduced scattering coefficients, absorption coefficients, and a metric of the scattering phase function that directly maps to the fractal dimension of scatter sizes. The approach is validated in tissue-simulating phantoms constructed with user-tuned scattering phase functions. The validation analysis shows that the phase function can be described in the presence of different scatter densities or background absorptions. Preliminary data from clinical tissue specimens show quantitative images of both the scatter density and the tissue fractal dimension for various tissue types and pathologies. These data represent a novel wide-field quantitative approach to mapping microscopic structural biomarkers that cannot be obtained with standard diffuse imaging. Implications for the use of this approach to assess surgical margins will be discussed.

  7. Microscopic surface structure of C/SiC composite mirrors for space cryogenic telescopes

    CERN Document Server

    Enya, Keigo; Kaneda, Hidehiro; Onaka, Takashi; Ozaki, Tuyoshi; Kume, Masami

    2007-01-01

    We report on the microscopic surface structure of carbon-fiber-reinforced silicon carbide (C/SiC) composite mirrors that have been improved for the Space Infrared Telescope for Cosmology and Astrophysics (SPICA) and other cooled telescopes. The C/SiC composite consists of carbon fiber, silicon carbide, and residual silicon. Specific microscopic structures are found on the surface of the bare C/SiC mirrors after polishing. These structures are considered to be caused by the different hardness of those materials. The roughness obtained for the bare mirrors is 20 nm rms for flat surfaces and 100 nm rms for curved surfaces. It was confirmed that a SiSiC slurry coating is effective in reducing the roughness to 2 nm rms. The scattering properties of the mirrors were measured at room temperature and also at 95 K. No significant change was found in the scattering properties through cooling, which suggests that the microscopic surface structure is stable with changes in temperature down to cryogenic values. The C/SiC ...

  8. Fixed Points on Abstract Structures without the Equality Test

    DEFF Research Database (Denmark)

    Korovina, Margarita

    2002-01-01

    The aim of this talk is to present a study of definability properties of fixed points of effective operators on abstract structures without the equality test. The question of definability of fixed points of -operators on abstract structures with equality was first studied by Gandy, Barwise, Mosch...

  9. Scanning electron microscopic structure of the prismatic layer in the Bivalvia

    Institute of Scientific and Technical Information of China (English)

    Iwao KOBAYASHI

    2008-01-01

    The shell structure of the Bivalvia has been observed with the use of optical and electron microscopes since the early 1900's. The prismatic structure is one of the more attractive shell structures in bivalved mollusks. This structure is composed of the aggregation of polygonal prisms arranged densely. Each prism is made of small calcite crystallites arranged perpendicular to a growth shell surface. Organic materials, named organic sheaths, accumulate around prisms and stain well with heamatox-ylin-eosin.The Bivalvia, which make prismatic structures, are divided into two groups. One group has the inner shell layer made up of a nacreous structure, and the other has the inner shell layer made up of a foliated structure. The aragonite prismatic layer and the prismatic layer are clo-sely related to each other, as is the aragonite prismatic layer to the composite prismatic one.

  10. What structural length scales can be detected by the spectral variance of a microscope image?

    OpenAIRE

    Cherkezyan, Lusik; Subramanian, Hariharan; Backman, Vadim

    2014-01-01

    A spectroscopic microscope, configured to detect interference spectra of backscattered light in the far zone, quantifies the statistics of refractive-index (RI) distribution via the spectral variance (Σ̃2) of the acquired bright-field image. Its sensitivity to subtle structural changes within weakly scattering, label-free media at subdiffraction scales shows great promise in fields from material science to medical diagnostics. We further investigate the length-scale sensitivity of Σ̃ and reve...

  11. Direct proton decay and microscopic structure of the spin-dipole resonance in Bi-208

    NARCIS (Netherlands)

    Akimune, H; Daito, [No Value; Fujita, Y; Fujiwara, M; Harakeh, MN; Janecke, J; Yosoi, M

    2000-01-01

    The microscopic structure of the spin-dipole resonance (SDR) at E-x = 21.1 MeV in Bi-208 has been investigated in the Pb-208(He-3,t)Bi-208 reaction at E(He-3) = 450 MeV and very forward scattering angles. Protons emitted due to the decay of the SDR were measured in solid-state detectors in coinciden

  12. Point Contacts in Modeling Conducting 2D Planar Structures

    CERN Document Server

    Thiel, David V; Hettenhausen, Jan; Lewis, Andrew

    2015-01-01

    Use of an optimization algorithm to improve performance of antennas and electromagnetic structures usually ends up in planar unusual shapes. Using rectangular conducting elements the proposed structures sometimes have connections with only one single point in common between two neighboring areas. The single point connections (point crossing) can affect the electromagnetic performance of the structure. In this letter, we illustrate the influence of point crossing on dipole and loop antennas using MoM, FDTD, and FEM solvers. Current distribution, radiation pattern, and impedance properties for different junctions are different. These solvers do not agree in the modeling of the point crossing junctions which is a warning about uncertainty in using such junctions. However, solvers agree that a negligible change in the junction would significantly change the antenna performance. We propose that one should consider both bridging and chamfering of the conflicting cells to find optimized structures. This reduces the ...

  13. Rheo-Raman microscope: Tracking molecular structures as a function of deformation and temperature

    Science.gov (United States)

    Plog, Jan P.; Meyer, Matt; De Vito, Francesca; Soergel, Fritz; Kotula, Anthony

    2016-05-01

    The Rheo-Raman Microscope combines rheology, Raman spectroscopy and polarization light microscopy and provides comprehensive insight into a material's bulk as well as micro structural properties under well defined and reproducible conditions such as temperature or shear profiles. The simultaneous acquisition with three independent analytical methods is advantageous for investigation of structural changes occurring for example in gelation, melting or crystallization. Details of this hyphenated instrumentation as well as selected results including temperature induced melting of a polymer emulsion and crystallization of a polymer melt are presented in this contribution.

  14. 3D modelling of microscopic structure of ring‑porous wood

    Directory of Open Access Journals (Sweden)

    R. Neugebauer

    2009-01-01

    Full Text Available Nowadays many scientific 3D models of wood are available. These models are suitable only for simulation of physical fields movements in wood but not for educational purposes especially demonstration of microscopic structure of wood.3D structure of ring-porous hardwood species was created. European ash (Faraxinus excelsior L. was selected due to its relatively simple wood structure than other wood species within ring-porous group. The model was created by manual modelling process in Rhinoceros 4.0 that is a software for visualization and modelling. Microslides were prepared from sample of ash to take micro photos that were used as a visual source for modelling. Beside these pictures made by authors of this paper other microphotos from wood anatomy publications were used. Created 3D model of ash is a VRML object (Virtual Reality Modelling Language. This format is available to viewing and presentation with severe freeware VRML browsers. These VRML browsers are available as a plug-in for standard internet browsers or as standalone VRML browsers. The model is useful for studying and teaching microscopic structure of ring‑porous hardwood species. It was created such a way to be as exact copy of original anatomical structure of ash wood as possible. The paper may be used as a cue for other authors to create their own 3D models of different wood kinds.

  15. Fabrication of grating-like polystyrene latex monolayer structure as three-dimensional calibration standards for scanning probe microscope

    Institute of Scientific and Technical Information of China (English)

    Zhu Guo-Dong; Zeng Zhi-Gang; Guo Zhang; Du Qiang-Guo; Yan Xue-Jian

    2009-01-01

    This paper illuminates the preparation of grating-like polystyrene latex monolayer structure, which can minimize the effects of the size deviation of spheres and the defect transfer on the accuracy as calibration samples for micro-scopes. The latex films are grown on freshly cleaved mica substrates by vertical deposition method. The concentration dependence of the structure and the topography of latex films is characterized by optical microscope, ultraviolet-visible transmission spectrum and scanning probe microscope. The origination of such a grating-like structure is also discussed.

  16. A miniaturized, high frequency mechanical scanner for high speed atomic force microscope using suspension on dynamically determined points

    NARCIS (Netherlands)

    Herfst, R.W.; Dekker, A.; Witvoet, G.; Crowcombe, W.E.; Lange, T.J. de; Sadeghian Marnani, H.

    2015-01-01

    One of the major limitations in the speed of the atomic force microscope (AFM) is the bandwidth of the mechanical scanning stage, especially in the vertical (z) direction. According to the design principles of “light and stiff” and “static determinacy,” the bandwidth of the mechanical scanner is

  17. A miniaturized, high frequency mechanical scanner for high speed atomic force microscope using suspension on dynamically determined points

    NARCIS (Netherlands)

    Herfst, R.W.; Dekker, A.; Witvoet, G.; Crowcombe, W.E.; Lange, T.J. de; Sadeghian Marnani, H.

    2015-01-01

    One of the major limitations in the speed of the atomic force microscope (AFM) is the bandwidth of the mechanical scanning stage, especially in the vertical (z) direction. According to the design principles of “light and stiff” and “static determinacy,” the bandwidth of the mechanical scanner is lim

  18. 3D mechanical measurements with an atomic force microscope on 1D structures

    DEFF Research Database (Denmark)

    Kallesøe, Christian; Larsen, Martin Benjamin Barbour Spanget; Bøggild, Peter;

    2012-01-01

    We have developed a simple method to characterize the mechanical properties of three dimensional nanostructures, such as nanorods standing up from a substrate. With an atomic force microscope the cantilever probe is used to deflect a horizontally aligned nanorod at different positions along...... the nanorod, using the apex of the cantilever itself rather than the tip normally used for probing surfaces. This enables accurate determination of nanostructures' spring constant. From these measurements, Young's modulus is found on many individual nanorods with different geometrical and material structures...... in a short time. Based on this method Young's modulus of carbon nanofibers and epitaxial grown III-V nanowires has been determined....

  19. A microscopic, non-equilibrium, statistical field theory for cosmic structure formation

    Science.gov (United States)

    Bartelmann, Matthias; Fabis, Felix; Berg, Daniel; Kozlikin, Elena; Lilow, Robert; Viermann, Celia

    2016-04-01

    Building upon the recent pioneering work by Mazenko and by Das and Mazenko, we develop a microscopic, non-equilibrium, statistical field theory for initially correlated canonical ensembles of classical microscopic particles obeying Hamiltonian dynamics. Our primary target is cosmic structure formation, where initial Gaussian correlations in phase space are believed to be set by inflation. We give an exact expression for the generating functional of this theory and work out suitable approximations. We specify the initial correlations by a power spectrum and derive general expressions for the correlators of the density and the response field. We derive simple closed expressions for the lowest-order contributions to the nonlinear cosmological power spectrum, valid for arbitrary wave numbers. We further calculate the bispectrum expected in this theory within these approximations and the power spectrum of cosmic density fluctuations to first order in the gravitational interaction, using a recent improvement of the Zel’dovich approximation. We show that, with a modification motivated by the adhesion approximation, the nonlinear growth of the density power spectrum found in numerical simulations of cosmic structure evolution is reproduced well to redshift zero and for arbitrary wave numbers even within first-order perturbation theory. Our results present the first fully analytic calculation of the nonlinear power spectrum of cosmic structures.

  20. Refinement of the crystal structures of biomimetic weddellites produced by microscopic fungus Aspergillus niger

    Science.gov (United States)

    Rusakov, A. V.; Frank-Kamenetskaya, O. V.; Gurzhiy, V. V.; Zelenskaya, M. S.; Izatulina, A. R.; Sazanova, K. V.

    2014-05-01

    The single-crystal structures of four biomimetic weddellites CaC2O4 · (2 + x)H2O with different contents of zeolitic water ( x = 0.10-0.24 formula units) produced by the microscopic fungus Aspergillus niger were refined from X-ray diffraction data ( R = 0.029-0.038). The effect of zeolitic water content on the structural stability of weddellite was analyzed. The parameter a was shown to increase with increasing x due to the increase in the distance between water molecules along this direction. The water content and structural parameters of the synthesized weddellites are similar to those of weddellites from biofilms and kidney stones.

  1. Challenging nuclear structure models through a microscopic description of proton inelastic scattering off 208Pb

    Science.gov (United States)

    Dupuis, M.; Karataglidis, S.; Bauge, E.; Delaroche, J.-P.; Gogny, D.

    2008-07-01

    Differential cross sections from fully microscopic calculations of inelastic proton scattering off 208Pb are compared to experimental scattering data for incident proton energies between 65 and 201 MeV. The required nucleon-nucleus interactions were formed by folding nuclear structure information with a reliable nucleon-nucleon effective interaction that has no adjustable parameter. The absence of phenomenological normalisation in our approach offers the possibility to interpret with confidence the calculated results in terms of the quality of the underlying nuclear structure description: a feature that had been reserved, until recently, to the electron probe. We have used this method to investigate the effect of long range correlations embedded in excited states on calculated inelastic observables and demonstrate the sensitivity of nucleon scattering predictions to details of the nuclear structure.

  2. Fixed Points on Abstract Structures without the Equality Test

    DEFF Research Database (Denmark)

    Korovina, Margarita V.

    2002-01-01

    In this paper we present a study of definability properties of fixed points of effective operators on abstract structures without the equality test. In particular we prove that Gandy theorem holds for abstract structures. This provides a useful tool for dealing with recursive definitions using -f...

  3. Ultrasonic nonlinear guided wave inspection of microscopic damage in a composite structure

    Science.gov (United States)

    Zhang, Li; Borigo, Cody; Owens, Steven; Lissenden, Clifford; Rose, Joseph; Hakoda, Chris

    2017-02-01

    Sudden structural failure is a severe safety threat to many types of military and industrial composite structures. Because sudden structural failure may occur in a composite structure shortly after macroscale damage initiates, reliable early diagnosis of microdamage formation in the composite structure is critical to ensure safe operation and to reduce maintenance costs. Ultrasonic guided waves have been widely used for long-range defect detection in various structures. When guided waves are generated under certain excitation conditions, in addition to the traditional linear wave mode (known as the fundamental harmonic wave mode), a number of nonlinear higher-order harmonic wave modes are also be generated. Research shows that the nonlinear parameters of a higher-order harmonic wave mode could have excellent sensitivity to microstructural changes in a material. In this work, we successfully employed a nonlinear guided wave structural health monitoring (SHM) method to detect microscopic impact damage in a 32-layer carbon/epoxy fiber-reinforced composite plate. Our effort has demonstrated that, utilizing appropriate transducer design, equipment, excitation signals, and signal processing techniques, nonlinear guided wave parameter measurements can be reliably used to monitor microdamage initiation and growth in composite structures.

  4. In situ observation of surface structures of cardiovascular endothelial cells with atomic force microscope

    Institute of Scientific and Technical Information of China (English)

    Tong Yin; Jin Luo; YaMin Ma; Xiao-Long Ji; Yu-Sheng Zhao; Shi-Wen Wang

    2009-01-01

    Objective To observe the surface structures of cardiovascular endothelial cells in situ with atomic force microscope (AFM). Methods Fresh aorta and aortic valve were dissected from 10 healthy male New Zealand white rabbits. Before fixed in 1% formaldehyde, the fresh tissues were washed in the buffer phosphate solution. Under general microscope, the fixed aorta or valve was spread on the double side stick tape which had already been stuck on the glass slide. The intima of aorta or the aorta side of valve was towards upside. Then the specimen was dried under 37 degrees centigrade in an attemperator and was washed with pure water. After dried again, the specimen was loaded on the platform ofNanoScope llla AFM and was scanned in tapping mode with the scanning speed of 0.5 HZ. Results The surface structures of endothelial cell on the fixed and dried tissue could be obsserved clearly in situ with AFM. Aortic endothclial cells were large, branched and arranged sparsely and parallel to the direction of blood flow, whereas endothelial cells on aorta valve surface were small, less branched and arranged intensively and vertical to the direction of blood flow. When the scanning range was dwindled, granular ultra-structures could be observed on the surface of endothelial cells, and, as the scanning range was dwindled further, fissure and convolution could be seen on the surface of granules from aortic endothelial cells. Centre cavity and surrounding swelling volcano-like structure could be seen on the surface of granules from endothelial cells of aortic valve. Conclusions It's feasible to observe the surface ultra-structures of cardiovascular endothelial cells in situ with AFM and morphological information provided by A FM might be of clinical value in future histopathological diagnosis.

  5. Nonequilibrium structure and dynamics in a microscopic model of thin-film active gels

    Science.gov (United States)

    Head, D. A.; Briels, W. J.; Gompper, Gerhard

    2014-03-01

    In the presence of adenosine triphosphate, molecular motors generate active force dipoles that drive suspensions of protein filaments far from thermodynamic equilibrium, leading to exotic dynamics and pattern formation. Microscopic modeling can help to quantify the relationship between individual motors plus filaments to organization and dynamics on molecular and supramolecular length scales. Here, we present results of extensive numerical simulations of active gels where the motors and filaments are confined between two infinite parallel plates. Thermal fluctuations and excluded-volume interactions between filaments are included. A systematic variation of rates for motor motion, attachment, and detachment, including a differential detachment rate from filament ends, reveals a range of nonequilibrium behavior. Strong motor binding produces structured filament aggregates that we refer to as asters, bundles, or layers, whose stability depends on motor speed and differential end detachment. The gross features of the dependence of the observed structures on the motor rate and the filament concentration can be captured by a simple one-filament model. Loosely bound aggregates exhibit superdiffusive mass transport, where filament translocation scales with lag time with nonunique exponents that depend on motor kinetics. An empirical data collapse of filament speed as a function of motor speed and end detachment is found, suggesting a dimensional reduction of the relevant parameter space. We conclude by discussing the perspectives of microscopic modeling in the field of active gels.

  6. Martian Microscope

    Science.gov (United States)

    2004-01-01

    The microscopic imager (circular device in center) is in clear view above the surface at Meridiani Planum, Mars, in this approximate true-color image taken by the panoramic camera on the Mars Exploration Rover Opportunity. The image was taken on the 9th sol of the rover's journey. The microscopic imager is located on the rover's instrument deployment device, or arm. The arrow is pointing to the lens of the instrument. Note the dust cover, which flips out to the left of the lens, is open. This approximated color image was created using the camera's violet and infrared filters as blue and red.

  7. Martian Microscope

    Science.gov (United States)

    2004-01-01

    The microscopic imager (circular device in center) is in clear view above the surface at Meridiani Planum, Mars, in this approximate true-color image taken by the panoramic camera on the Mars Exploration Rover Opportunity. The image was taken on the 9th sol of the rover's journey. The microscopic imager is located on the rover's instrument deployment device, or arm. The arrow is pointing to the lens of the instrument. Note the dust cover, which flips out to the left of the lens, is open. This approximated color image was created using the camera's violet and infrared filters as blue and red.

  8. A new statistical scission-point model fed with microscopic ingredients to predict fission fragments distributions; Developpement d'un nouveau modele de point de scission base sur des ingredients microscopiques

    Energy Technology Data Exchange (ETDEWEB)

    Heinrich, S

    2006-07-01

    Nucleus fission process is a very complex phenomenon and, even nowadays, no realistic models describing the overall process are available. The work presented here deals with a theoretical description of fission fragments distributions in mass, charge, energy and deformation. We have reconsidered and updated the B.D. Wilking Scission Point model. Our purpose was to test if this statistic model applied at the scission point and by introducing new results of modern microscopic calculations allows to describe quantitatively the fission fragments distributions. We calculate the surface energy available at the scission point as a function of the fragments deformations. This surface is obtained from a Hartree Fock Bogoliubov microscopic calculation which guarantee a realistic description of the potential dependence on the deformation for each fragment. The statistic balance is described by the level densities of the fragment. We have tried to avoid as much as possible the input of empirical parameters in the model. Our only parameter, the distance between each fragment at the scission point, is discussed by comparison with scission configuration obtained from full dynamical microscopic calculations. Also, the comparison between our results and experimental data is very satisfying and allow us to discuss the success and limitations of our approach. We finally proposed ideas to improve the model, in particular by applying dynamical corrections. (author)

  9. Lidar point cloud representation of canopy structure for biomass estimation

    Science.gov (United States)

    Neuenschwander, A. L.; Krofcheck, D. J.; Litvak, M. E.

    2014-12-01

    Laser mapping systems (lidar) have become an essential remote sensing tool for determining local and regional estimates of biomass. Lidar data (possibly in conjunction with optical imagery) can be used to segment the landscape into either individual trees or clusters of trees. Canopy characteristics (i.e. max, mean height) for a segmented tree are typically derived from a rasterized canopy height model (CHM) and subsequently used in a regression model to estimate biomass. The process of rasterizing the lidar point cloud into a CHM, however, reduces the amount information about the tree structure. Here, we compute statistics for each segmented tree from the raw lidar point cloud rather than a rasterized CHM. Working directly from the lidar point cloud enables a more accurate representation of the canopy structure. Biomass estimates from the point cloud method are compared against biomass estimates derived from a CHM for a Juniper savanna in New Mexico.

  10. Structure investigation of Cellobiohydrolase I from Trichoderma pseudokoningii S38 with a scanning tunneling microscope

    Science.gov (United States)

    Zhang, Y. Z.; Liu, J.; Gao, P. J.; Ma, L. P.; Shi, D. X.; Pang, S. J.

    Cellobiohydrolase I (CBH I) was isolated from a cellulolytic fungal strain Trichoderma pseudokoningii S38, and its ultrastructure was investigated with a scanning tunneling microscope (STM). The STM images showed that the shape of intact CBH I was tadpole-like, consisting of a big head and a long tail. It could be deduced that the head domain was the core protein for the catalytic function, and the long tail was the cellulose binding domain for substrate binding. Thus, for this enzyme molecule, functional differentiation is reflected in the structure peculiarities. This is the first direct observation of the three-dimensional structure of intact CBH I from real space at nanometer scale. The functional mechanism is also discussed.

  11. Maximum probability domains for the analysis of the microscopic structure of liquids

    CERN Document Server

    Agostini, Federica; Savin, Andreas; Vuilleumier, Rodolphe

    2014-01-01

    We introduce the concept of maximum probability domains, developed in the context of the analysis of electronic densities, in the study of the microscopic spatial structures of liquids. The idea of locating a particle in a three dimensional region, by determining the domain where the probability of finding that, and only that, particle is maximum, gives an interesting characterisation of the local structure of the liquid. The optimisation procedure, required for the search of the domain of maximum probability, is carried out by the implementation of the level set method. Some results for few case studies are presented. In particular by looking at liquid water at different densities or at the solvation shells of Na$^+$ always in liquid water.

  12. Scanning electron microscopic observations of fibrous structure of cemento-dentinal junction in healthy teeth.

    Science.gov (United States)

    Pratebha, B; Jaikumar, N D; Sudhakar, R

    2014-01-01

    The cemento-dentinal junction (CDJ) is a structural and biologic link between cementum and dentin present in the roots of teeth. Conflicting reports about the origin, structure and composition of this layer are present in literature. The width of this junctional tissue is reported to be about 2-4 μm with adhesion of cementum and dentin by proteoglycans and by collagen fiber intermingling. The objective of this study is to observe and report the fibrous architecture of the CDJ of healthy tooth roots. A total of 15 healthy teeth samples were collected, sectioned into halves, demineralized in 5% ethylenediaminetetraacetic acid, processed using NaOH maceration technique and observed under a scanning electron microscope. The CDJ appeared to be a fibril poor groove with a width of 2-4 µm. Few areas of collagen fiber intermingling could be appreciated. A detailed observation of these tissues has been presented.

  13. A nitrogen-vacancy spin based molecular structure microscope using multiplexed projection reconstruction

    CERN Document Server

    Lazariev, Andrii

    2015-01-01

    Methods and techniques to measure and image beyond the state-of-the-art have always been influential in propelling basic science and technology. Because current technologies are venturing into nanoscopic and molecular-scale fabrication, atomic-scale measurement techniques are inevitable. One such emerging sensing method uses the spins associated with nitrogen-vacancy (NV) defects in diamond. The uniqueness of this NV sensor is its atomic size and ability to perform precision sensing under ambient conditions conveniently using light and microwaves (MW). These advantages have unique applications in nanoscale sensing and imaging of magnetic fields from nuclear spins in single biomolecules. During the last few years, several encouraging results have emerged towards the realization of an NV spin-based molecular structure microscope. Here, we present a projection-reconstruction method that retrieves the three-dimensional structure of a single molecule from the nuclear spin noise signatures. We validate this method ...

  14. Study on the Structure of C-Phycocyanin in Spirulina platensis with Scanning Tunneling Microscope.

    Science.gov (United States)

    Zhang, Yu-Zhong; Shi, Dong-Xia; Zhou, Bai-Cheng; Zeng, Cheng-Kui; Pang, Shi-Jin

    1997-01-01

    The C-phycocyanin (C-PC) trimmer was isolated from the blue-green alga Spirulina platensis, and scanning tunneling microscope (STM) was used to investigate its structure. High resolution STM images of C-PC were obtained. From the STM images, it could be observed that the C-PC molecules were disk-like in shape and the subunits of C-PC arranged in ring-like pattern with a channel in the center. After filter treatment, the folding of the polypeptide chains could be seen clearly. This is the first time to observe directly the topography of phycobiliprotein, and the results showed STM to be a powerful tool for the structural study of phycobiliproteins.

  15. ON THE MICROSCOPIC AND MACROSCOPIC ASPECTS OF NUCLEAR STRUCTURE WITH APPLICATIONS TO SUPERHEAVY NUCLEI

    Energy Technology Data Exchange (ETDEWEB)

    Tsang, Chin-Fu.

    1969-05-22

    The thesis is concerned with the relation between a microscopic approach and a macroscopic approach to the study of the nuclear binding energy as a function of neutron number, proton number and nuclear deformations. First of all we give a general discussion of the potential energy of a system which can be divided into a bulk region and a thin skin layer. We find that this energy can be written down in the usual liquid drop type of expression, i.e., in terms of the volume, the surface area and other macroscopic properties of the system. The discussion is illustrated by a study of noninteracting particles in an orthorhombic potential well with zero potential inside and infinite potential outside. The total energy is calculated both exactly (a microscopic approach) and also from a liquid drop type of expression (a macroscopic approach). It turns out that the latter approach reproduces the smooth average of the exact results very well. We next make a digression to study the saddle point shapes of a charged conducting drop on a pure liquid drop model. We compare the properties of a conducting drop with those of a drop whose charges are distributed uniformly throughout its volume. The latter is the usual model employed in the study of nuclear fission. We also determined some of the more important symmetric saddle point shapes. In the last part of the thesis we generalize a method due to Strutinski to synthesize a microscopic approach (the Nilsson model) and a macroscopic approach (the liquid drop model). The results are applied to realistic nuclei. The possible occurrence of shape isomers comes as a natural consequence of the present calculation. Their trends as a function of neutron and proton members are discussed and the results are tabulated. We also work out the stabilities of the predicted superheavy nuclei with proton number around 114 and neutron number around 184 and 196. Some of these nuclei appear to have extremely long life times. The possible experimental

  16. Effect of point defects and disorder on structural phase transitions

    Energy Technology Data Exchange (ETDEWEB)

    Toulouse, J.

    1997-06-01

    Since the beginning in 1986, the object of this project has been Structural Phase Transitions (SPT) in real as opposed to ideal materials. The first stage of the study has been centered around the role of Point Defects in SPT`s. Our intent was to use the previous knowledge we had acquired in the study of point defects in non-transforming insulators and apply it to the study of point defects in insulators undergoing phase transitions. In non-transforming insulators, point defects, in low concentrations, marginally affect the bulk properties of the host. It is nevertheless possible by resonance or relaxation methods to study the point defects themselves via their local motion. In transforming solids, however, close to a phase transition, atomic motions become correlated over very large distances; there, even point defects far removed from one another can undergo correlated motions which may strongly affect the transition behavior of the host. Near a structural transition, the elastic properties win be most strongly affected so as to either raise or decrease the transition temperature, prevent the transition from taking place altogether, or simply modify its nature and the microstructure or domain structure of the resulting phase. One of the well known practical examples is calcium-stabilized zirconia in which the high temperature cubic phase is stabilized at room temperature with greatly improved mechanical properties.

  17. X(5) Critical-Point Structure in a Finite System

    CERN Document Server

    Leviatan, A

    2005-01-01

    X(5) is a paradigm for the structure at the critical point of a particular first-order phase transition for which the intrinsic energy surface has two degenerate minima separated by a low barrier. For a finite system, we show that the dynamics at such a critical point can be described by an effective deformation determined by minimizing the energy surface after projection onto angular momentum zero, and combined with two-level mixing. Wave functions of a particular analytic form are used to derive estimates for energies and quadrupole rates at the critical point.

  18. Expert Segmentation for the Extraction of Biomedical Structures in Microscopical Images

    Science.gov (United States)

    Botto, A.; Casali, Anna Maria; Dellepiane, Silvana G.; Ghilino, G.; Vernazza, Gianni L.

    1989-05-01

    To overcome the typical difficulties for the extraction of biomedical structures in microscopical images, a knowledge-based system has been designed with the aim of performing a model-driven segmentation towards automatic structure recognition. The work deals with the characterization of cell populations in human embryonal and foetal organs, in particular blood vessels and nervous cells. By using a-priori known description (in linguistic form) about the structures to be detected, a thresholding segmentation is initially used for locating darker pixels (markers). Then gradient extraction, region-growing, or other techniques are invoked around the area bounding markers. The computation of some specific attributes of the analyzed areas drives the recognition process allowing to maintain regions where structures are detected, and discard regions where structure presence is not verified. The segmentation and recognition process is controlled by a production system whose rules are activated on the basis of the input data, the progressive results, and the information (provided by the user) about the structures to be localized. Some results are presented to the user, obtained by changing processing parameters. They correspond to recognized maps with different reliability factors.

  19. Transmission positron microscopes

    Energy Technology Data Exchange (ETDEWEB)

    Doyama, Masao [Teikyo University of Science and Technology, Uenohara, Yamanashi 409-0193 (Japan)]. E-mail: doyama@ntu.ac.jp; Kogure, Yoshiaki [Teikyo University of Science and Technology, Uenohara, Yamanashi 409-0193 (Japan); Inoue, Miyoshi [Teikyo University of Science and Technology, Uenohara, Yamanashi 409-0193 (Japan); Kurihara, Toshikazu [Institute of Materials Structure Science (IMSS), High Energy Accelerator, Research Organization (KEK), Ohno 1-1, Tsukuba, Ibaraki 305-0801 (Japan); Yoshiie, Toshimasa [Reactor Research Institute, Kyoto University, Noda, Kumatori, Osaka 590-0451 (Japan); Oshima, Ryuichiro [Research Institute for Advanced Science and Technology, Osaka Prefecture University (Japan); Matsuya, Miyuki [Electron Optics Laboratory (JEOL) Ltd., Musashino 3-1-2, Akishima 196-0021 (Japan)

    2006-02-28

    Immediate and near-future plans for transmission positron microscopes being built at KEK, Tsukuba, Japan, are described. The characteristic feature of this project is remolding a commercial electron microscope to a positron microscope. A point source of electrons kept at a negative high voltage is changed to a point source of positrons kept at a high positive voltage. Positional resolution of transmission microscopes should be theoretically the same as electron microscopes. Positron microscopes utilizing trapping of positrons have always positional ambiguity due to the diffusion of positrons.

  20. High-speed infrared thermography for the measurement of microscopic boiling parameters on micro- and nano-structured surfaces

    Energy Technology Data Exchange (ETDEWEB)

    Park, Youngjae; Kim, Hyungdae [Kyung Hee Univ., Yongin (Korea, Republic of); Kim, Hyungmo [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of); Kim, Joonwon [POSTECH, Pohang (Korea, Republic of)

    2014-10-15

    Micro- and nano-scale structures on boiling surfaces can enhance nucleate boiling heat transfer coefficient (HTC) and critical heat flux (CHF). A few studies were conducted to explain the enhancements of HTC and CHF using the microscopic boiling parameters. Quantitative measurements of microscopic boiling parameters are needed to understand the physical mechanism of the boiling heat transfer augmentation on structured surfaces. However, there is no existing experimental techniques to conveniently measure the boiling parameters on the structured surfaces because of the small (structured surfaces. The visualization results are analyzed to obtain the microscopic boiling parameters. Finally, quantitative microscopic boiling parameters are used to interpret the enhancement of HTC and CHF. In this study, liquid-vapor phase distributions of each surface were clearly visualized by IR thermography during the nucleate boiling phenomena. From the visualization results, following microscopic boiling parameters were quantitatively measured by image processing. - Number density of dry patch, NDP IR thermography technique was demonstrated by nucleate pool boiling experiments with M- and N surfaces. The enhancement of HTC and CHF could be explained by microscopic boiling parameters.

  1. Constraints on Stress Components at the Internal Singular Point of an Elastic Compound Structure

    Science.gov (United States)

    Pestrenin, V. M.; Pestrenina, I. V.

    2017-03-01

    The classical analytical and numerical methods for investigating the stress-strain state (SSS) in the vicinity of a singular point consider the point as a mathematical one (having no linear dimensions). The reliability of the solution obtained by such methods is valid only outside a small vicinity of the singular point, because the macroscopic equations become incorrect and microscopic ones have to be used to describe the SSS in this vicinity. Also, it is impossible to set constraint or to formulate solutions in stress-strain terms for a mathematical point. These problems do not arise if the singular point is identified with the representative volume of material of the structure studied. In authors' opinion, this approach is consistent with the postulates of continuum mechanics. In this case, the formulation of constraints at a singular point and their investigation becomes an independent problem of mechanics for bodies with singularities. This method was used to explore constraints at an internal singular point (representative volume) of a compound wedge and a compound rib. It is shown that, in addition to the constraints given in the classical approach, there are also constraints depending on the macroscopic parameters of constituent materials. These constraints turn the problems of deformable bodies with an internal singular point into nonclassical ones. Combinations of material parameters determine the number of additional constraints and the critical stress state at the singular point. Results of this research can be used in the mechanics of composite materials and fracture mechanics and in studying stress concentrations in composite structural elements.

  2. Evaluation of Microscopic Structural Changes of XLPE Sheets due to Thermal Deterioration

    Science.gov (United States)

    Kurihara, Takashi; Takahashi, Toshihiro; Dohi, Kenji; Homma, Hiroya; Okamoto, Tatsuki

    Cross-linked polyethylene (XLPE) sheets were thermally deteriorated in atmospheric air at 180°C for at most 100 hours, and microscopic structural changes due to oxidation such as material density, crystallinity, gel fraction and free volumes were evaluated by the Archimedes' technique, the X-ray diffraction method, the gel fraction measurement and the positron annihilation technique, respectively. As a result, it was found that the crystallinity and free volumes decreased after about 40 hours of heating on the upper surface of XLPE sheets where air supply was sufficient during heating and oxidation degree was high. However, on the lower surface that contacted with a metal plate during heating and was less oxidized, changes of crystallinity and free volumes were small after 40 hours of heating. When the crystallinity and free volumes decreased, the material density increased. It was also found that the gel fraction increased at 100 hours of heating. The observation results of cross-sections of XLPE sheets by the transmission electron microscope showed that lamella crystals disappeared after 40 hours of heating especially near the upper surface of XLPE sheets and agree with the change of the crystallinity. Then, the relationships between the material density, the crystallinity and free volumes in the cases of crystalline polymers such as polyethylene without deterioration and XLPE thermally deteriorated at 180°C were discussed.

  3. Crossing points in the electronic band structure of vanadium oxide

    Directory of Open Access Journals (Sweden)

    Keshav N. Shrivastava

    2010-03-01

    Full Text Available The electronic band structures of several models of vanadium oxide are calculated. In the models 1-3, every vanadium atom is connected to 4 oxygen atoms and every oxygen atom is connected to 4 vanadium atoms. In model 1, a=b=c 2.3574 Å; in model 2, a= 4.7148 Å, b= 2.3574 Å and c= 2.3574 Å; and in model 3, a= 4.7148 Å, b= 2.3574 Å and c= 4.7148 Å. In the models 4-6, every vanadium atom is connected to 4 oxygen atoms and every oxygen atom is connected to 2 vanadium atoms. In model 4, a=b= 4.551 Å and c= 2.851 Å; in model 5, a=b=c= 3.468 Å; and in model 6, a=b=c= 3.171 Å. We have searched for a crossing point in the band structure of all the models. In model 1 there is a point at which five bands appear to meet but the gap is 7.3 meV. In model 2 there is a crossing point between G and F points and there is a point between F and Q with the gap ≈ 3.6608 meV. In model 3, the gap is very small, ~ 10-5 eV. In model 4, the gap is 5.25 meV. In model 5, the gap between Z and G points is 2.035 meV, and in model 6 the gap at Z point is 4.3175 meV. The crossing point in model 2 looks like one line is bent so that the supersymmetry is broken. When pseudopotentials are replaced by a full band calculation, the crossing point changes into a gap of 2.72 x 10-4 eV.

  4. Microscopic dynamics of water around unfolded structures of barstar at room temperature

    Energy Technology Data Exchange (ETDEWEB)

    Pal, Somedatta; Chakraborty, Kaushik; Khatua, Prabir; Bandyopadhyay, Sanjoy, E-mail: sanjoy@chem.iitkgp.ernet.in [Molecular Modeling Laboratory, Department of Chemistry, Indian Institute of Technology, Kharagpur 721302 (India)

    2015-02-07

    The breaking of the native structure of a protein and its influences on the dynamic response of the surrounding solvent is an important issue in protein folding. In this work, we have carried out atomistic molecular dynamics simulations to unfold the protein barstar at two different temperatures (400 K and 450 K). The two unfolded forms obtained at such high temperatures are further studied at room temperature to explore the effects of nonuniform unfolding of the protein secondary structures along two different pathways on the microscopic dynamical properties of the surface water molecules. It is demonstrated that though the structural transition of the protein in general results in less restricted water motions around its segments, but there are evidences of formation of new conformational motifs upon unfolding with increasingly confined environment around them, thereby resulting in further restricted water mobility in their hydration layers. Moreover, it is noticed that the effects of nonuniform unfolding of the protein segments on the relaxation times of the protein–water (PW) and the water–water (WW) hydrogen bonds are correlated with hindered hydration water motions. However, the kinetics of breaking and reformation of such hydrogen bonds are found to be influenced differently at the interface. It is observed that while the effects of unfolding on the PW hydrogen bond kinetics seem to be minimum, but the kinetics involving the WW hydrogen bonds around the protein segments exhibit noticeably heterogeneous characteristics. We believe that this is an important observation, which can provide valuable insights on the origin of heterogeneous influence of unfolding of a protein on the microscopic properties of its hydration water.

  5. Algorithms and Data Structures for Strings, Points and Integers

    DEFF Research Database (Denmark)

    Vind, Søren Juhl

    This dissertation presents our research in the broad area of algorithms and data structures. More specifically, we show solutions for the following problems related to strings, points and integers. Results hold on the Word RAM and we measure space in w-bit words. Compressed Fingerprints. The Karp...

  6. Non-equilibrium structure and dynamics in a microscopic model of thin film active gels

    CERN Document Server

    Head, D A; Gompper, G

    2013-01-01

    In the presence of ATP, molecular motors generate active force dipoles that drive suspensions of protein filaments far from thermodynamic equilibrium, leading to exotic dynamics and pattern formation. Microscopic modelling can help to quantify the relationship between individual motors plus filaments to the large-wavelength properties represented by "hydrodynamic" models. Here we present results of extensive numerical simulations of active gels where the motors and filaments are confined between two infinite parallel plates. Thermal fluctuations and excluded-volume interactions between filaments are included. A systematic variation of rates for motor motion, attachment and detachment, including a differential detachment rate from filament ends, reveals a range of non-equilibrium behaviour. Strong motor binding produces structured filament aggregates that we refer to as asters, bundles or layers, whose stability depends on motor speed and differential end-detachment. The gross features of the dependence of the...

  7. Bright-field Nanoscopy: Visualizing Nano-structures with Localized Optical Contrast Using a Conventional Microscope

    CERN Document Server

    Suran, Swathi; Raghavan, Srinivasan; Varma, Manoj M

    2015-01-01

    Most methods for optical visualization beyond the diffraction limit rely on fluorescence emission by molecular tags. Here, we report a method for visualization of nanostructures down to a few nanometers using a conventional bright-field microscope without requiring additional molecular tags such as fluorophores. The technique, Bright-field Nanoscopy, is based on the strong thickness dependent color of ultra-thin germanium on an optically thick gold film. We demonstrate the visualization of grain boundaries in chemical vapour deposited single layer graphene and the detection of single 40 nm Ag nanoparticles. We estimate a size detection limit of about 2 nm using this technique. In addition to visualizing nano-structures, this technique can be used to probe fluid phenomena at the nanoscale, such as transport through 2D membranes. We estimated the water transport rate through a 1 nm thick polymer film using this technique, as an illustration. Further, the technique can also be extended to study the transport of ...

  8. Simple structured illumination microscope setup with high acquisition speed by using a spatial light modulator

    CERN Document Server

    Förster, Ronny; Jost, Aurélie; Kielhorn, Martin; Wicker, Kai; Heintzmann, Rainer

    2014-01-01

    We describe a two-beam interference structured illumination fluorescence microscope. The novelty of the presented system lies in its simplicity. A programmable electro-optical spatial light modulator in an intermediate image plane enables precise and rapid control of the excitation pattern in the specimen. The contrast of the projected light pattern is strongly influenced by the polarization state of the light entering the high NA objective. To achieve high contrast, we use a segmented polarizer. Furthermore, a mask with six holes blocks unwanted components in the spatial frequency spectrum of the illumination grating. Both these passive components serve their purpose in a simpler and almost as efficient way as active components. We demonstrate a lateral resolution of 114.2 +- 9.5 nm at a frame rate of 7.6 fps per reconstructed 2D slice.

  9. Microscopic model for the neutron dynamic structure factor of solid methane in phase II

    Energy Technology Data Exchange (ETDEWEB)

    Shin Yunchang, E-mail: yunchang.shin@yale.ed [Department of Physics, Indiana University Bloomington, IN 47408 (United States); Department of Physics, Yale University, New Haven, CT 06520 (United States); Mike Snow, W.; Liu, C.Y.; Lavelle, C.M.; Baxter, David V. [Department of Physics, Indiana University Bloomington, IN 47408 (United States)

    2010-08-21

    We have constructed a microscopic model for the neutron dynamic structure factor S(Q,{omega}) of solid methane in phase II. We expect this model to apply for neutron energies below 1 eV at pressures near 1 bar and temperatures below 20 K where methane possesses both free rotation and hindered rotation modes of the tetrahedral molecules in the unit cell. The model treats the motions of molecular translations, intra-molecular vibrations and the free and hindered rotations of methane molecule as independent. Total scattering cross-sections calculated from the model agree with the cross-section measurements for incident neutron energies of 0.5 meV-1 eV. The effective density of states is extracted from the model. We also present the quantitative calculation of the separate contributions of the two different rotational modes to the inelastic cross-section for different methane temperatures in phase II.

  10. Microscopic quantum structure of black hole and vacuum versus quantum statistical origin of gravity

    CERN Document Server

    Wang, Shun-Jin

    2012-01-01

    The Planckon densely piled model of vacuum is proposed. Based on it, the microscopic quantum structure of Schwarzschild black hole and quantum statistical origin of its gravity are studied. It is shown that thermodynamic temperature equilibrium and mechanical acceleration balance make the space-time of the black hole horizon singular and Casimir effect works inside the horizon. This effect makes the inside vacuum have less zero fluctuation energy than the outside vacuum, and a temperature difference as well as gravity as thermal pressure are created. A dual relation between inside and outside regions of the black hole is found. By dual relation, an attractor behaviour of the horizon surface is unveiled. Outside horizon, there exist thermodynamic non-equilibrium and mechanical non-balance which lead to outward centrifugal energy flow and inward gravitation energy flow, their compensation establishes local equilibrium. The lost vacuum energy in negative gravitation potential regions has been removed to the blac...

  11. Simple structured illumination microscope setup with high acquisition speed by using a spatial light modulator.

    Science.gov (United States)

    Förster, Ronny; Lu-Walther, Hui-Wen; Jost, Aurélie; Kielhorn, Martin; Wicker, Kai; Heintzmann, Rainer

    2014-08-25

    We describe a two-beam interference structured illumination fluorescence microscope. The novelty of the presented system lies in its simplicity. A programmable spatial light modulator (ferroelectric LCoS) in an intermediate image plane enables precise and rapid control of the excitation pattern in the specimen. The contrast of the projected light pattern is strongly influenced by the polarization state of the light entering the high NA objective. To achieve high contrast, we use a segmented polarizer. Furthermore, a mask with six holes blocks unwanted components in the spatial frequency spectrum of the illumination grating. Both these passive components serve their purpose in a simpler and almost as efficient way as active components. We demonstrate a lateral resolution of 114.2 ± 9.5 nm at a frame rate of 7.6 fps per reconstructed 2D slice.

  12. The Asymmetrical Structure of Golgi Apparatus Membranes Revealed by In situ Atomic Force Microscope

    Science.gov (United States)

    Xu, Haijiao; Su, Weiheng; Cai, Mingjun; Jiang, Junguang; Zeng, Xianlu; Wang, Hongda

    2013-01-01

    The Golgi apparatus has attracted intense attentions due to its fascinating morphology and vital role as the pivot of cellular secretory pathway since its discovery. However, its complex structure at the molecular level remains elusive due to limited approaches. In this study, the structure of Golgi apparatus, including the Golgi stack, cisternal structure, relevant tubules and vesicles, were directly visualized by high-resolution atomic force microscope. We imaged both sides of Golgi apparatus membranes and revealed that the outer leaflet of Golgi membranes is relatively smooth while the inner membrane leaflet is rough and covered by dense proteins. With the treatment of methyl-β-cyclodextrin and Triton X-100, we confirmed the existence of lipid rafts in Golgi apparatus membrane, which are mostly in the size of 20 nm –200 nm and appear irregular in shape. Our results may be of significance to reveal the structure-function relationship of the Golgi complex and pave the way for visualizing the endomembrane system in mammalian cells at the molecular level. PMID:23613878

  13. The asymmetrical structure of Golgi apparatus membranes revealed by in situ atomic force microscope.

    Science.gov (United States)

    Xu, Haijiao; Su, Weiheng; Cai, Mingjun; Jiang, Junguang; Zeng, Xianlu; Wang, Hongda

    2013-01-01

    The Golgi apparatus has attracted intense attentions due to its fascinating morphology and vital role as the pivot of cellular secretory pathway since its discovery. However, its complex structure at the molecular level remains elusive due to limited approaches. In this study, the structure of Golgi apparatus, including the Golgi stack, cisternal structure, relevant tubules and vesicles, were directly visualized by high-resolution atomic force microscope. We imaged both sides of Golgi apparatus membranes and revealed that the outer leaflet of Golgi membranes is relatively smooth while the inner membrane leaflet is rough and covered by dense proteins. With the treatment of methyl-β-cyclodextrin and Triton X-100, we confirmed the existence of lipid rafts in Golgi apparatus membrane, which are mostly in the size of 20 nm -200 nm and appear irregular in shape. Our results may be of significance to reveal the structure-function relationship of the Golgi complex and pave the way for visualizing the endomembrane system in mammalian cells at the molecular level.

  14. The asymmetrical structure of Golgi apparatus membranes revealed by in situ atomic force microscope.

    Directory of Open Access Journals (Sweden)

    Haijiao Xu

    Full Text Available The Golgi apparatus has attracted intense attentions due to its fascinating morphology and vital role as the pivot of cellular secretory pathway since its discovery. However, its complex structure at the molecular level remains elusive due to limited approaches. In this study, the structure of Golgi apparatus, including the Golgi stack, cisternal structure, relevant tubules and vesicles, were directly visualized by high-resolution atomic force microscope. We imaged both sides of Golgi apparatus membranes and revealed that the outer leaflet of Golgi membranes is relatively smooth while the inner membrane leaflet is rough and covered by dense proteins. With the treatment of methyl-β-cyclodextrin and Triton X-100, we confirmed the existence of lipid rafts in Golgi apparatus membrane, which are mostly in the size of 20 nm -200 nm and appear irregular in shape. Our results may be of significance to reveal the structure-function relationship of the Golgi complex and pave the way for visualizing the endomembrane system in mammalian cells at the molecular level.

  15. MICROSCOPIC STRUCTURE AND MORPHOMETRIC PARAMETERS OF EUROPEAN CATFISH (SILURIS GLANIS L. SPLEEN

    Directory of Open Access Journals (Sweden)

    O. Dunaevskaya

    2016-03-01

    Full Text Available Purpose. Study of the microscopic structure and morphometric parameters of European catfish spleen. Methodology. For the study, we used the spleen of clinically healthy age-2 European catfish (Silurus glanis L.. We determined the absolute and relative weight of the organ or the index of spleen development. For the histological studies, pieces of the material were preserved in 10-12 % cooled neutral formalin solution, with subsequent filling in paraffin. Paraffin sections were prepared using a sledge microtome, with a thickness of no more than 10 microns. To determine the cell and tissue morphology under light microscopy, we the staining of histological sections with hematoxylin and eosin. Determination of spleen linear dimensions, morphometric measurements were carried out using the "Master of Morphology". Quantitative parameters were analyzed in "Statistica 6.0". Findings. European catfish spleen corresponded to general regularities of fish spleen structure: we identified support-contractile apparatus, white and red pulp and inherent cellular composition. Peculiarities of the microscopic structure of this organ in European catfish is underdevelopment of radial trabeculae, poor development of periarterial lymphoid sheaths, absence of the differentiation to zones in lymphoid nodules. The most developed was red pulp (70.82 ± 10.76%, the least developed — support-contractile apparatus (7.04 ± 0.65%. The base of the white pulp (22.14 ± 6.61% is lymphoid nodules without propagation center. The support-contractile apparatus of the spleen, which includes capsule and trabecular system, is developed unevenly. E.g., the capsule thickness in different parts of the body is not the same, the biggest thickness is in porta, where it attains 21.85 ± 7.44 micrometers, its relative area is 3.06 ± 0.32%. Relative area of the trabecular system is 3.98 ± 2.57%, the most developed are vascular trabeculae. Originality. We found the peculiarities of spleen

  16. A nitrogen-vacancy spin based molecular structure microscope using multiplexed projection reconstruction

    Science.gov (United States)

    Lazariev, Andrii; Balasubramanian, Gopalakrishnan

    2015-01-01

    Methods and techniques to measure and image beyond the state-of-the-art have always been influential in propelling basic science and technology. Because current technologies are venturing into nanoscopic and molecular-scale fabrication, atomic-scale measurement techniques are inevitable. One such emerging sensing method uses the spins associated with nitrogen-vacancy (NV) defects in diamond. The uniqueness of this NV sensor is its atomic size and ability to perform precision sensing under ambient conditions conveniently using light and microwaves (MW). These advantages have unique applications in nanoscale sensing and imaging of magnetic fields from nuclear spins in single biomolecules. During the last few years, several encouraging results have emerged towards the realization of an NV spin-based molecular structure microscope. Here, we present a projection-reconstruction method that retrieves the three-dimensional structure of a single molecule from the nuclear spin noise signatures. We validate this method using numerical simulations and reconstruct the structure of a molecular phantom β-cyclodextrin, revealing the characteristic toroidal shape. PMID:26370514

  17. Nanoimaging and ultra structure of Entamoeba histolytica and its pseudopods by using atomic force microscope

    Science.gov (United States)

    Joshi, Narahari V.; Medina, Honorio; Urdaneta, H.; Barboza, J.

    2000-04-01

    Nan-imaging of Entamoeba histolytica was carried out by using Atomic Force Microscope (AFM). The structure of the nucleus, endoplasm and ectoplasm were studied separately. The diameter of the nucleus in living E. histolytica was found to be of the order of 10 micrometers which is slightly higher than the earlier reported value. The presence of karysome was detected in the nucleus. Well-organized patterns of chromatoid bodies located within the endoplasm, were detected and their repetitive patterns were examined. The organized structure was also extended within the ectoplasm. The dimensions and form of the organization suggest that chromatic bodies are constituted with ribosomes ordered in the form of folded sheet. Such structures were found to be absent in non-living E. histolytica. AFM images were also captured just in the act when ameba was extending its pseudopods. Alteration in the ultrastructure caused during the process of extension was viewed. Well marked canals of width 694.05 nm. And height 211.05 nm are clearly perceptible towards the direction of the pseudopods. 3D images are presented to appreciate the height variation, which can not be achieved by conventional well-established techniques such as electron microscopy.

  18. A nitrogen-vacancy spin based molecular structure microscope using multiplexed projection reconstruction

    Science.gov (United States)

    Lazariev, Andrii; Balasubramanian, Gopalakrishnan

    2015-09-01

    Methods and techniques to measure and image beyond the state-of-the-art have always been influential in propelling basic science and technology. Because current technologies are venturing into nanoscopic and molecular-scale fabrication, atomic-scale measurement techniques are inevitable. One such emerging sensing method uses the spins associated with nitrogen-vacancy (NV) defects in diamond. The uniqueness of this NV sensor is its atomic size and ability to perform precision sensing under ambient conditions conveniently using light and microwaves (MW). These advantages have unique applications in nanoscale sensing and imaging of magnetic fields from nuclear spins in single biomolecules. During the last few years, several encouraging results have emerged towards the realization of an NV spin-based molecular structure microscope. Here, we present a projection-reconstruction method that retrieves the three-dimensional structure of a single molecule from the nuclear spin noise signatures. We validate this method using numerical simulations and reconstruct the structure of a molecular phantom β-cyclodextrin, revealing the characteristic toroidal shape.

  19. Microscopic Structures of Endosperms Before and After Gelatinization in Rice Varieties with Varied Grain Quality

    Institute of Scientific and Technical Information of China (English)

    YANG Ze-min; WANG Wei-jin; LAN Sheng-yin; XU Zhen-xiu; ZHOU Zhu-qing; WANG Meng

    2003-01-01

    The microscopic structures of the endosperm of indica rice varieties with different quality be-fore and after gelatinization were observed using scanning electron microscope. The results showed that the de-gree of gelatinization varied in different parts of the grain and in different varieties under the same experimen-tal conditions. The gelatinization of dorsal side was the most complete. Its cells were decomposed totally intopuff-like or flocculent materials. The ventral side gelatinized less thoroughly, appearing agglomerate and somecell frames were still visible. The middle part gelatinized most incompletely and the cells were still integrated.Evident differences in gelatinization were observed among different varieties, the dorsal, ventral and middleparts of high quality varieties gelatinized more thoroughly than those of the corresponding parts of low qualityvarieties respectively. An obvious concavity often appeared in the middle of the cross-section of the low qualitygrains while the cross-section of high quality grains was normally flat. The same phenomenon was noted whencomparing the early maturing indica rice and the late maturing indica rice. Varietal difference of gelatiniza-tion in dorsal sides was not as distinct as in middle parts and ventral sides. The difference among dorsal side,middle part and ventral side in gelatinization was greater in low quality grains than that of high quality grains.In addition, a lot of ruptured cells were observed in the cross-section of high quality rice, while few of themcould be found in the low quality rice. Apparently, the number of ruptured cells is positively correlated withrice quality. Quality of rice grain also has positive correlation with the rate of water absorption and extension. Highrates of water absorption and extension lead to better gelatinization of rice grain, and hence indicate good quality.

  20. Microscopic Polyangiitis

    Science.gov (United States)

    ... are here: Home / Types of Vasculitis / Microscopic Polyangiitis Microscopic Polyangiitis First Description Who gets Microscopic Polyangiitis (the “ ... differences as to justify separate classifications. Who gets Microscopic Polyangiitis? A typical patient MPA can affect individuals ...

  1. Laser beam scanning microscope and piezoresponse force microscope studies on domain structured in 001-, 110-, and 111-oriented NaNbO3 films

    Science.gov (United States)

    Yamazoe, Seiji; Kohori, Akihiro; Sakurai, Hiroyuki; Kitanaka, Yuuki; Noguchi, Yuji; Miyayama, Masaru; Wada, Takahiro

    2012-09-01

    NaNbO3 (NN) films were epitaxially grown on SrRuO3/(001), (110), and (111)SrTiO3 substrates, and these NN films were characterized by a laser beam scanning microscope and a piezoresponse force microscope. The 001-oriented NN film had antiferroelectric 90° domains with 100 and 010 polarization axes and 90° domain walls exhibiting piezoresponse. The piezoresponding domain walls would be induced by ferroelasticity. On the other hand, the 110- and 111-oriented NN films possessed 60° domains. The 60° domains of 110-oriented NN film were constructed by antiferroelectric 11¯0 domain and piezoresponding {101} and {011} domains. In the case of 111-oriented NN, three kinds of 60° domains (11¯0 and 01¯1, 01¯1 and 101¯, and 101¯ and 11¯0) were observed. The fine domains with piezoresponse were also observed in the mixed region with the three 60° domains. From the stress measurement, we found that the difference in the domain structure of 001-, 110-, and 111-oriented NN films depends not only on the orientation direction but also on the stress from the substrate. Moreover, the stress and the induction of the piezoelectric domain also influence the dielectric behavior.

  2. Post-Structural Methodology at the Quilting Point: Intercultural Encounters.

    Science.gov (United States)

    Gillett, Grant

    Lacan's quilting point connects a network of signifiers with the lived world as a place of voices, memory, and adaptation "seen in" the mirror of language. Crossing cultures can obscure the ways we make sense of the world. Some planes of signification, in aiming to be universal in their knowledge (such as the natural sciences), try to track objects and events independent of our thoughts about them and the ways that signifiers may slide past each other. However, cross-structural comparison and the analysis of cross cultural encounters cannot treat its objects of interest that way. Thus we need a theory and methodology that effectively connects the multilayered discourses of subjectivities from diverse cultures and allows triangulation between them in relation to points of shared experience. At such points we need a critical attitude to our own framework and an openness to the uneasy reflective equilibrium that uncovers assumptions and modes of thinking that will hamper us. Quilting points are such points where different discourses converge on a single event or set of events so as to mark "vertical" connections allowing tentative alignments between ways of meaning so that we can begin to build real cross-cultural understanding.

  3. On the correlation between microscopic structural heterogeneity and embrittlement behavior in metallic glasses.

    Science.gov (United States)

    Li, Weidong; Gao, Yanfei; Bei, Hongbin

    2015-10-05

    In order to establish a relationship between microstructure and mechanical properties, we systematically annealed a Zr-based bulk metallic glass (BMG) at 100 ~ 300 °C and measured their mechanical and thermal properties. The as-cast BMG exhibits some ductility, while the increase of annealing temperature and time leads to the transition to a brittle behavior that can reach nearly-zero fracture energy. The differential scanning calorimetry did not find any significant changes in crystallization temperature and enthalpy, indicating that the materials still remained fully amorphous. Elastic constants measured by ultrasonic technique vary only slightly with respect to annealing temperature and time, which does obey the empirical relationship between Poisson's ratio and fracture behavior. Nanoindentation pop-in tests were conducted, from which the pop-in strength mapping provides a "mechanical probe" of the microscopic structural heterogeneities in these metallic glasses. Based on stochastically statistic defect model, we found that the defect density decreases with increasing annealing temperature and annealing time and is exponentially related to the fracture energy. A ductile-versus-brittle behavior (DBB) model based on the structural heterogeneity is developed to identify the physical origins of the embrittlement behavior through the interactions between these defects and crack tip.

  4. Ultra-structural hair alterations in Friedreich's ataxia: A scanning electron microscopic investigation.

    Science.gov (United States)

    Turkmenoglu, F Pinar; Kasirga, U Baran; Celik, H Hamdi

    2015-08-01

    Friedreich's ataxia (FRDA) is an autosomal recessive inherited disorder involving progressive damage to the central and peripheral nervous systems and cardiomyopathy. FRDA is caused by the silencing of the FXN gene and reduced levels of the encoded protein, frataxin. Frataxin is a mitochondrial protein that functions primarily in iron-sulfur cluster synthesis. Skin disorders including hair abnormalities have previously been reported in patients with mitochondrial disorders. However, to our knowledge, ultra-structural hair alterations in FRDA were not demonstrated. The purpose of this study was to determine ultra-structural alterations in the hairs of FRDA patients as well as carriers. Hair specimen from four patients, who are in different stages of the disease, and two carriers were examined by scanning electron microscope. Thin and weak hair follicles with absence of homogeneities on the cuticular surface, local damages of the cuticular layer, cuticular fractures were detected in both carriers and patients, but these alterations were much more prominent in the hair follicles of patients. In addition, erosions on the surface of the cuticle and local deep cavities just under the cuticular level were observed only in patients. Indistinct cuticular pattern, pores on the cuticular surface, and presence of concavities on the hair follicle were also detected in patients in later stages of the disease. According to our results, progression of the disease increased the alterations on hair structure. We suggest that ultra-structural alterations observed in hair samples might be due to oxidative stress caused by deficient frataxin expression in mitochondria. © 2015 Wiley Periodicals, Inc.

  5. Microscopic and macroscopic characterization of the charging effects in SiC/Si nanocrystals/SiC sandwiched structures.

    Science.gov (United States)

    Xu, Jie; Xu, Jun; Wang, Yuefei; Cao, Yunqing; Li, Wei; Yu, Linwei; Chen, Kunji

    2014-02-07

    Microscopic charge injection into the SiC/Si nanocrystals/SiC sandwiched structures through a biased conductive AFM tip is subsequently characterized by both electrostatic force microscopy and Kelvin probe force microscopy (KPFM). The charge injection and retention characteristics are found to be affected by not only the band offset at the Si nanocrystals/SiC interface but also the doping type of the Si substrate. On the other hand, capacitance-voltage (C-V) measurements investigate the macroscopic charging effect of the sandwiched structures with a thicker SiC capping layer, where the charges are injected from the Si substrates. The calculated macroscopic charging density is 3-4 times that of the microscopic one, and the possible reason is the underestimation of the microscopic charging density caused by the averaging effect and detection delay in the KPFM measurements.

  6. Laser Control of Self-Organization Process in Microscopic Region and Fabrication of Fine Microporous Structure

    Directory of Open Access Journals (Sweden)

    Yukimasa Matsumura

    2012-01-01

    Full Text Available We present a controlling technique of microporous structure by laser irradiation during self-organization process. Self-organization process is fabrication method of microstructure. Polymer solution was dropped on the substrate at high humid condition. Water in air appears dropping air temperature below the dew point. The honeycomb structure with regularly aligned pores on the film was fabricated by attaching water droplets onto the solution surface. We demonstrate that it was possible to prevent forming pores at the region of laser irradiation and flat surface was fabricated. We also demonstrated that a combination structure with two pore sizes and flat surface was produced by a single laser-pulse irradiation. Our method is a unique microfabrication processing technique that combines the advantages of bottom-up and top-down techniques. This method is a promising technique that can be applied to produce for photonic crystals, biological cell culturing, surface science and electronics fields, and so forth.

  7. Atomic force microscopic study on topological structures of pBR322 DNA

    Institute of Scientific and Technical Information of China (English)

    张平城; 白春礼; 成英俊; 方晔; 王中怀; 黄熙泰

    1996-01-01

    Plasmid pBR322 DNA (0.5mg/mL) isolated from Escherichia coli HB101 was suspended in Tris-HCl-EDTA (1 mol/L - 0.1 mol/L, pH8.5); then a drop of the above solution was deposited on freshly cleaved mica substrate. After adsorption for about 1 min, the sample was stained with phosphotungstic acid. The residua] solution was removed with a piece of filter paper. Afterwards the sample was imaged with a home-made atomic force microscope (AFM) in air. The AFM images of pBR322 DNA with a molecular resolution have been obtained. These images show that pBR322 DNA exists in several different topological structures: (i) relaxed circular DNA with a different diameter; (ii) supercondensed DNA with different particle sizes; (iii) dimeric catenane connected by one relaxed circular molecule and another dose-compacted molecule which might be either supercoiled or intramolecular knotted form; (iv) oligomeric catenane with multiple irregular molecules in which DNA is interlocked into a complex oligomer; (v) possibly-existing

  8. Lipid memberane:inelastic deformation of surface structure by an atomic force microscope

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The stability of the 1,2-Dioleoyl-sn-Glycero-3-[phospho-rac-1-Glycerol-Na] liposome in the liquid crystalline state have been investigated using an atomic force microscope(AFM),We have observed the inelastic deformation of the sample surface,The AFM tip causes persistent deformation of the surface of the lipid membrane,in which some of the lipid molecules are eventually pushed or dragged by the AFM tip.The experiment shows how the surface structure of the lipid membrane can be created by the interaction between the AFM tip and lipid membrane.When the operating force exceeds 10-8N,it leads to large deformations of the surface.A squareregion of about 1×1um2 is created by the scanning probe on the surface,When the operating force is between 10-11N and 10-8N,it can image the topography of the surface of the lipid membrane.The stability of the sample is related to the concentration of the medium in which the sample is prepared.

  9. Lipid membrane: inelastic deformation of surface structure by an atomic force microscope

    Institute of Scientific and Technical Information of China (English)

    张静; 孙润广

    2002-01-01

    The stability of the 1,2-Dioleoyl-sn-Glycero-3-[phospho-rac-1-Glycerol-Na] liposome in the liquid crystalline statehave been investigated using an atomic force microscope (AFM). We have observed the inelastic deformation of thesample surface. The AFM tip causes persistent deformation of the surface of the lipid membrane, in which some of thelipid molecules are eventually pushed or dragged by the AFM tip. The experiment shows how the surface structure ofthe lipid membrane can be created by the interaction between the AFM tip and lipid membrane. When the operatingforce exceeds 10-8 N, it leads to large deformations of the surface. A square region of about 1×1μm2 is created by thescanning probe on the surface. When the operating force is between 10-11N and 10-8N, it can image the topographyof the surface of the lipid membrane. The stability of the sample is related to the concentration of the medium in whichthe sample is prepared.

  10. The microscopic investigation of structures of moving flux lines by neutron and muon techniques

    Indian Academy of Sciences (India)

    E M Forgan; D Charalambous; P G Kealey

    2002-05-01

    We have used a variety of microscopic techniques to reveal the structure and motion of flux line arrangements, when the flux lines in low c type II superconductors are caused to move by a transport current. Using small-angle neutron scattering by the flux line lattice (FLL), we are able to demonstrate directly the alignment by motion of the nearest-neighbor FLL direction. This tends to be parallel to the direction of flux line motion, as had been suspected from two-dimensional simulations. We also see the destruction of the ordered FLL by plastic flow and the bending of flux lines. Another technique that our collaboration has employed is the direct measurement of flux line motion, using the ultra-high-resolution spectroscopy of the neutron spin-echo technique to observe the energy change of neutrons diffracted by moving flux lines. The muon spin rotation (SR) technique gives the distribution of values of magnetic field within the FLL. We have recently succeeded in performing SR measurements while the FLL is moving. Such measurements give complementary information about the local speed and orientation of the FLL motion. We conclude by discussing the possible application of this technique to thin film superconductors.

  11. STUDY ON STRUCTURE OF SINGULAR POINTS OF LAMINAR FLAME SYSTEM

    Institute of Scientific and Technical Information of China (English)

    WANG Xiu-e; YIN Xian-jun

    2005-01-01

    Under some certain assumptions, the physical model of the air combustion system was simplified to a laminar flame system. The mathematical model of the laminar flame system, which was built according to thermodynamics theory and the corresponding conservative laws, was studied. With the aid of qualitative theory and method of ordinary differential equations, the location of singular points on the Rayleigh curves is determined,the qualitative structure and the stability of the singular points of the laminar flame system,which are located in the areas of deflagration and detonation, are given for different parameter values and uses of combustion. The phase portraits of the laminar flame system in the reaction-stagnation enthalpy and combustion velocity-stagnation enthalpy planes are shown in the corresponding figures.

  12. A three-photon microscope with adaptive optics for deep-tissue in vivo structural and functional brain imaging

    Science.gov (United States)

    Tao, Xiaodong; Lu, Ju; Lam, Tuwin; Rodriguez, Ramiro; Zuo, Yi; Kubby, Joel

    2017-02-01

    We developed a three-photon adaptive optics add-on to a commercial two-photon laser scanning microscope. We demonstrated its capability for structural and functional imaging of neurons labeled with genetically encoded red fluorescent proteins or calcium indicators deep in the living mouse brain with cellular and subcellular resolution.

  13. Structural Analysis: Shape Information via Points-To Computation

    CERN Document Server

    Marron, Mark

    2012-01-01

    This paper introduces a new hybrid memory analysis, Structural Analysis, which combines an expressive shape analysis style abstract domain with efficient and simple points-to style transfer functions. Using data from empirical studies on the runtime heap structures and the programmatic idioms used in modern object-oriented languages we construct a heap analysis with the following characteristics: (1) it can express a rich set of structural, shape, and sharing properties which are not provided by a classic points-to analysis and that are useful for optimization and error detection applications (2) it uses efficient, weakly-updating, set-based transfer functions which enable the analysis to be more robust and scalable than a shape analysis and (3) it can be used as the basis for a scalable interprocedural analysis that produces precise results in practice. The analysis has been implemented for .Net bytecode and using this implementation we evaluate both the runtime cost and the precision of the results on a num...

  14. Structure of the magnetopause current layer at the subsolar point

    Energy Technology Data Exchange (ETDEWEB)

    Okuda, H.

    1991-12-01

    A one-dimensional electromagnetic particle simulation model developed for the magnetopause current layer between the shocked solar wind and the dipole magnetic field at the subsolar point has been extended to include the interplanetary magnetic field (IMF) in the solar wind. Interaction of the solar wind with the vacuum dipole field as well as the dipole field filled with a low density magnetospheric plasma are studied. It is found that the width and the structure of the magnetopause current layer differ markedly depending on the direction of the IMF. When the IMF is pointing southward, the current layer between the solar wind and the dipole field is narrow and the magnetic field has a single ramp structure caused by the reflection of the solar wind at that point. The current layer becomes several times wider and the magnetic field developes a multiple ramp structure when the IMF is northward. This broadening of the current layer is caused by the multiple reflection of the solar wind by the magnetic field. For the northward IMF, the magnetic field does not change its sign across the current layer so that the E {times} B drift of the solar wind electrons remains the same direction while for the southward IMF, it reverses the sign. This results in a single reflection of the solar wind for the southward IMF and multiple reflections for the northward IMF. When a low density mangetospheric plasma is present in the dipole magnetic field, a small fraction of the solar wind ions are found to penetrate into the dipole magnetic field beyond the reflection point of the solar wind electrons. The width of the ion current layer is of the order of the solar wind ion gyroradius, however, the current associated with the ions remains much smaller than the electron current so long as the density of the magnetospheric plasma is much smaller than the density of the solar wind. Comparisons of our simulation results with the magnetopause crossing near the subsolar point are provided.

  15. Identification of Fragile Microscopic Structures during Mineral Transformations in Wet Supercritical CO2

    Energy Technology Data Exchange (ETDEWEB)

    Arey, Bruce W.; Kovarik, Libor; Qafoku, Odeta; Wang, Zheming; Hess, Nancy J.; Felmy, Andrew R.

    2013-04-01

    In this study we examine the nature of highly fragile reaction products that form in low water content super critical carbon dioxide (scCO2) using a combination of scanning electron microscopy/focus ion beam (SEM/FIB), confocal Raman spectroscopy, helium ion microscopy (HeIM), and transmission electron microscopy (TEM). HeIM images show these precipitates to be fragile rosettes that can readily decompose even under slight heating from an electron beam. Using the TEM revealed details on the interfacial structure between the newly formed surface precipitates and the underlying initial solid phases. The detailed microscopic analysis revealed that the growth of the precipitates either followed a tip growth mechanism with precipitates forming directly on the forsterite surface if the initial solid was non-porous (natural forsterite) or growth from the surface of the precipitates where fluid was conducted through the porous (nanoforsterite) agglomerates to the growth center. The mechanism of formation of the hydrated/hydroxylated magnesium carbonate compound (HHMC) phases offers insight into the possible mechanisms of carbonate mineral formation from scCO2 solutions which has recently received a great deal of attention as the result of the potential for CO2 to act as an atmospheric greenhouse gas and impact overall global warming. The techniques used here to examine these fragile structures an also be used to examine a wide range of fragile material surfaces. SEM and FIB technologies have now been brought together in a single instrument, which represents a powerful combination for the studies in biological, geological and materials science.

  16. Microscopic origin of the 1.3 G(0) conductance observed in oxygen-doped silver quantum point contacts.

    Science.gov (United States)

    Tu, Xingchen; Wang, Minglang; Sanvito, Stefano; Hou, Shimin

    2014-11-21

    Besides the peak at one conductance quantum, G0, two additional features at ∼0.4 G0 and ∼1.3 G0 have been observed in the conductance histograms of silver quantum point contacts at room temperature in ambient conditions. In order to understand such feature, here we investigate the electronic transport and mechanical properties of clean and oxygen-doped silver atomic contacts by employing the non-equilibrium Green's function formalism combined with density functional theory. Our calculations show that, unlike clean Ag single-atom contacts showing a conductance of 1 G0, the low-bias conductance of oxygen-doped Ag atomic contacts depends on the number of oxygen impurities and their binding configuration. When one oxygen atom binds to an Ag monatomic chain sandwiched between two Ag electrodes, the low-bias conductance of the junction always decreases. In contrast, when the number of oxygen impurities is two and the O-O axis is perpendicular to the Ag-Ag axis, the transmission coefficients at the Fermi level are, respectively, calculated to be 1.44 for the junction with Ag(111) electrodes and 1.24 for that with Ag(100) electrodes, both in good agreement with the measured value of ∼1.3 G0. The calculated rupture force (1.60 nN for the junction with Ag(111) electrodes) is also consistent with the experimental value (1.66 ± 0.09 nN), confirming that the measured ∼1.3 G0 conductance should originate from Ag single-atom contacts doped with two oxygen atoms in a perpendicular configuration.

  17. Microscopic origin of the 1.3 G0 conductance observed in oxygen-doped silver quantum point contacts

    KAUST Repository

    Tu, Xingchen

    2014-11-21

    © 2014 AIP Publishing LLC. Besides the peak at one conductance quantum, G0, two additional features at ∼0.4 G0 and ∼1.3 G0 have been observed in the conductance histograms of silver quantum point contacts at room temperature in ambient conditions. In order to understand such feature, here we investigate the electronic transport and mechanical properties of clean and oxygen-doped silver atomic contacts by employing the non-equilibrium Green\\'s function formalism combined with density functional theory. Our calculations show that, unlike clean Ag single-atom contacts showing a conductance of 1 G0, the low-bias conductance of oxygen-doped Ag atomic contacts depends on the number of oxygen impurities and their binding configuration. When one oxygen atom binds to an Ag monatomic chain sandwiched between two Ag electrodes, the low-bias conductance of the junction always decreases. In contrast, when the number of oxygen impurities is two and the O-O axis is perpendicular to the Ag-Ag axis, the transmission coefficients at the Fermi level are, respectively, calculated to be 1.44 for the junction with Ag(111) electrodes and 1.24 for that with Ag(100) electrodes, both in good agreement with the measured value of ∼1.3 G0. The calculated rupture force (1.60 nN for the junction with Ag(111) electrodes) is also consistent with the experimental value (1.66 ± 0.09 nN), confirming that the measured ∼1.3 G0 conductance should originate from Ag single-atom contacts doped with two oxygen atoms in a perpendicular configuration.

  18. Nonequilibrium structure and dynamics in a microscopic model of thin-film active gels

    NARCIS (Netherlands)

    Head, D.A.; Briels, W.J.; Gompper, G.

    2014-01-01

    In the presence of adenosine triphosphate, molecular motors generate active force dipoles that drive suspensions of protein filaments far from thermodynamic equilibrium, leading to exotic dynamics and pattern formation. Microscopic modeling can help to quantify the relationship between individual mo

  19. The structure of three-dimensional magnetic neutral points

    Science.gov (United States)

    Parnell, C. E.; Smith, J. M.; Neukirch, T.; Priest, E. R.

    1996-03-01

    The local configurations of three-dimensional magnetic neutral points are investigated by a linear analysis about the null. It is found that the number of free parameters determining the arrangement of field lines is four. The configurations are first classified as either potential or non-potential. Then the non-potential cases are subdivided into three cases depending on whether the component of current parallel to the spine is less than, equal to or greater than a threshold current; therefore there are three types of linear non-potential null configurations (a radial null, a critical spiral and a spiral). The effect of the four free parameters on the system is examined and it is found that only one parameter categorizes the potential configurations, whilst two parameters are required if current is parallel to the spine. However, all four parameters are needed if there is current both parallel and perpendicular to the spine axis. The magnitude of the current parallel to the spine determines whether the null has spiral, critical spiral or radial field lines whilst the current perpendicular to the spine affects the inclination of the fan plane to the spine. A simple method is given to determine the basic structure of a null given M the matrix which describes the local linear structure about a null point.

  20. Hierarchical object parsing from structured noisy point clouds.

    Science.gov (United States)

    Barbu, Adrian

    2013-07-01

    Object parsing and segmentation from point clouds are challenging tasks because the relevant data is available only as thin structures along object boundaries or other features, and is corrupted by large amounts of noise. To handle this kind of data, flexible shape models are desired that can accurately follow the object boundaries. Popular models such as active shape and active appearance models (AAMs) lack the necessary flexibility for this task, while recent approaches such as the recursive compositional models make model simplifications to obtain computational guarantees. This paper investigates a hierarchical Bayesian model of shape and appearance in a generative setting. The input data is explained by an object parsing layer which is a deformation of a hidden principal component analysis (PCA) shape model with Gaussian prior. The paper also introduces a novel efficient inference algorithm that uses informed data-driven proposals to initialize local searches for the hidden variables. Applied to the problem of object parsing from structured point clouds such as edge detection images, the proposed approach obtains state-of-the-art parsing errors on two standard datasets without using any intensity information.

  1. Control-structure interaction in precision pointing servo loops

    Science.gov (United States)

    Spanos, John T.

    1989-01-01

    The control-structure interaction problem is addressed via stability analysis of a generic linear servo loop model. With the plant described by the rigid body mode and a single elastic mode, structural flexibility is categorized into one of three types: (1) appendage, (2) in-the-loop minimum phase, and (3) in-the-loop nonminimum phase. Closing the loop with proportional-derivative (PD) control action and introducing sensor roll-off dynamics in the feedback path, stability conditions are obtained. Trade studies are conducted with modal frequency, modal participation, modal damping, loop bandwidth, and sensor bandwidth treated as free parameters. Results indicate that appendage modes are most likely to produce instability if they are near the sensor rolloff, whereas in-the-loop modes are most dangerous near the loop bandwidth. The main goal of this paper is to provide a fundamental understanding of the control-structure interaction problem so that it may benefit the design of complex spacecraft and pointing system servo loops. In this framework, the JPL Pathfinder gimbal pointer is considered as an example.

  2. Fixed point sensitivity analysis of interacting structured populations.

    Science.gov (United States)

    Barabás, György; Meszéna, Géza; Ostling, Annette

    2014-03-01

    Sensitivity analysis of structured populations is a useful tool in population ecology. Historically, methodological development of sensitivity analysis has focused on the sensitivity of eigenvalues in linear matrix models, and on single populations. More recently there have been extensions to the sensitivity of nonlinear models, and to communities of interacting populations. Here we derive a fully general mathematical expression for the sensitivity of equilibrium abundances in communities of interacting structured populations. Our method yields the response of an arbitrary function of the stage class abundances to perturbations of any model parameters. As a demonstration, we apply this sensitivity analysis to a two-species model of ontogenetic niche shift where each species has two stage classes, juveniles and adults. In the context of this model, we demonstrate that our theory is quite robust to violating two of its technical assumptions: the assumption that the community is at a point equilibrium and the assumption of infinitesimally small parameter perturbations. Our results on the sensitivity of a community are also interpreted in a niche theoretical context: we determine how the niche of a structured population is composed of the niches of the individual states, and how the sensitivity of the community depends on niche segregation.

  3. Point Defect Phenomena of Crystalline Structure in Some Common Structural Materials

    Institute of Scientific and Technical Information of China (English)

    RUAN Yu-Zhong; WU Ren-Ping; YU Yan

    2005-01-01

    The existence and its movement rule of crystalline structure defect are closely related to the diffusion, solid phase reaction, sintering, phase transformation as well as the physical and chemical properties of materials. Point defect theory has been widely applied in material mineralization research, unfavorable transformation controlling, material modification,the research and development of new materials and so on. Point defect theory is one of the important theories for new material research and development. Herein we mainly discuss the application of point defect theory in some structural material researches.

  4. Microscopic structured light 3D profilometry: Binary defocusing technique vs. sinusoidal fringe projection

    Science.gov (United States)

    Li, Beiwen; Zhang, Song

    2017-09-01

    This paper compares the binary defocusing technique with conventional sinusoidal fringe projection under two different 3D microscopic profilometry systems: (1) both camera and projector use telecentric lenses and (2) only camera uses a telecentric lens. Our simulation and experiments found that the binary defocusing technique is superior to the traditional sinusoidal fringe projection method by improving the measurement resolution approximately 19%. Finally, by taking the speed advantage of the binary defocusing technique, we presented a high-speed (500 Hz) and high-resolution (1600×1200) 3D microscopic profilometry system that could reach kHz.

  5. Imaging of Tissue Micro-Structures using a Multi-Modal Microscope Design

    Energy Technology Data Exchange (ETDEWEB)

    Demos, S G; Lieber, C A; Lin, B; Ramsamooj, R

    2005-08-12

    We investigate a microscope design that offers high signal sensitivity and hyperspectral imaging capabilities and allows for implementation of various optical imaging approaches while its operational complexity is minimized. This system utilizes long working distance microscope objectives that enable for off-axis illumination of the tissue thereby allowing for excitation at any optical wavelength and nearly eliminating spectral noise from the optical elements. Preliminary studies using human and animal tissues demonstrate the feasibility of this approach for real-time imaging of intact tissue microstructures using autofluorescence and light scattering imaging methods.

  6. Imaging of Tissue Micro-Structures using a Multi-Modal Microscope Design

    Energy Technology Data Exchange (ETDEWEB)

    Demos, S G; Lieber, C A; Lin, B; Ramsamooj, R

    2005-08-12

    We investigate a microscope design that offers high signal sensitivity and hyperspectral imaging capabilities and allows for implementation of various optical imaging approaches while its operational complexity is minimized. This system utilizes long working distance microscope objectives that enable for off-axis illumination of the tissue thereby allowing for excitation at any optical wavelength and nearly eliminating spectral noise from the optical elements. Preliminary studies using human and animal tissues demonstrate the feasibility of this approach for real-time imaging of intact tissue microstructures using autofluorescence and light scattering imaging methods.

  7. Wave-Structure Interactions on Point Absorbers - an experimental study

    DEFF Research Database (Denmark)

    Jakobsen, Morten Møller

    used in the case studies is a pitching point absorber (Wavestar). The central part of the thesis deals with the challenges, choices, and experi- ences gained during the Ph.D. The more in-depth technical details and results are presented in peer-reviewed publications and technical reports. The chal...... models. Using a modification by Faltinsen to take into account the relative motion of the device, the contributions from drag, excitation and body motion are determined. 2: Determining the peak pressure on the surface on the device during extreme events and in freak conditions. A great deal of work has...... been done to determine peak pressures on mono-piles worldwide, but only very little on spherical structures. In order to shed more light on the wave induced loads on a hemisphere the peak pressures are measured with the traditional drop test and during impact of so-called freak waves. 3: Implementation...

  8. 半导体表面电学特性微观四点探针测试技术研究进展%Latest development of electrical characterization of semicondutor surface by microscopic four-point probe technique

    Institute of Scientific and Technical Information of China (English)

    李建昌; 王永; 简晓慧; 巴德纯

    2011-01-01

    四探针法是材料学及半导体行业电学表征的常用方法.随着微电子器件尺度持续减小,新型纳米材料研究不断深入,须将探针间距控制到亚微米及其以下范畴才能获得更高的空间分辨率和表面灵敏度.近年来研究人员借助显微技术开发出两类微观四点探针测试系统,即整体式微观四点探针和独立四点扫描隧道显微镜探针系统,随着现代微加工技术的发展,当前探针间距已缩小到几十纳米范围.本文综述了微观四点探针技术近年来的研究进展,主要包括测试理论、系统结构与探针制备.其中,特别详述了涉及探针制备的方法、技术及所面临问题,并展望了微观四点探针研究的发展方向,并给出了一些具体建议.%Four-point probe characterization is a usual method for studying the electrical properties of solids and thin films. The distance between tip and sample in four-point probe technique has to be reduced to sub-micro scale at least in order to obtain expected surface sensitivity and spatial resolution. Therefore, microscopic four-point probes (M4PPs) need to be combined with some microscopy techniques. Two types of M4PPs have been developed in the past few years, which are monolithic micro-four-point probes and four-point scanning tunneling microscopy probes. In this paper, we review the latest development of M4PPs from aspects of system construction, probe structure and test theories. The approaches of probe preparation are discussed in detail. Probe life and sample surface damage are another two big challenges for the microscopic four-point probe technique. To deal with such problems, flexible cantilevers can be used as the probe by keeping a certain angle to the sample surface.

  9. Microscopic Cluster Models: application to the structure of the {sup 16}B nucleus

    Energy Technology Data Exchange (ETDEWEB)

    Dufour, M [IPHC Bat27, IN2P3-CNRS/Universite de Strasbourg BP28, F-67037 Strasbourg Cedex 2 (France); Descouvemont, P, E-mail: marianne.dufour@iphc.cnrs.fr [Physique Nucleaire Theorique et Physique Mathematique, C.P. 229, Universite Libre de Bruxelles (ULB), B 1050 Brussels (Belgium)

    2011-09-16

    General aspects of microscopic cluster models based on the combination of the Generator-Coordinate-Method and of the R-matrix method are presented. The adequacy of such methods to describe the physics of exotic light nuclei is illustrated with the unbound {sup 16}B nucleus.

  10. Microscopic Structure of a Vortex Line in a Dilute Superfluid Fermi Gas

    DEFF Research Database (Denmark)

    Nygaard, Nicolai; Bruun, G. M.; Clark, C. W.;

    2003-01-01

    The microscopic properties of a single vortex in a dilute superfluid Fermi gas at zero temperature are examined within the framework of self-consistent Bogoliubov–de Gennes theory. Using only physical parameters as input, we study the pair potential, the density, the energy, and the current...

  11. Two-neutron overlap functions for {sup 6}He from a microscopic structure model.

    Energy Technology Data Exchange (ETDEWEB)

    Brida, I.; Nunes, F. M. (Physics); (Michigan State Univ.)

    2010-12-01

    A fully antisymmetrized microscopic model is developed for light two-neutron halo nuclei using a hyper-spherical basis to describe halo regions. The many-body wavefunction is optimized variationally. The model is applied to {sup 6}He bound by semi realistic Minnesota nucleon-nucleon forces. The two-neutron separation energy and the radius of the halo are reproduced in agreement with experiment. Antisymmetrization effects between {sup 4}He and halo neutrons are found to be crucial for binding of {sup 6}He. We also properly extract two-neutron overlap functions and find that there is a significant increase of 30%-70% in their normalization due to microscopic effects as compared to the results of three-body models.

  12. Two-neutron overlap functions for {sup 6}He from a microscopic structure model

    Energy Technology Data Exchange (ETDEWEB)

    Brida, I., E-mail: brida@anl.go [NSCL and Department of Physics and Astronomy, Michigan State University, East Lansing, MI 48824 (United States); Physics Division, Argonne National Laboratory, Argonne, IL 60439 (United States); Nunes, F.M. [NSCL and Department of Physics and Astronomy, Michigan State University, East Lansing, MI 48824 (United States)

    2010-12-01

    A fully antisymmetrized microscopic model is developed for light two-neutron halo nuclei using a hyper-spherical basis to describe halo regions. The many-body wavefunction is optimized variationally. The model is applied to {sup 6}He bound by semi realistic Minnesota nucleon-nucleon forces. The two-neutron separation energy and the radius of the halo are reproduced in agreement with experiment. Antisymmetrization effects between {sup 4}He and halo neutrons are found to be crucial for binding of {sup 6}He. We also properly extract two-neutron overlap functions and find that there is a significant increase of 30%-70% in their normalization due to microscopic effects as compared to the results of three-body models.

  13. Electrochemical Deposition of Metal Nano-Disk Structures Using the Scanning Tunneling Microscope

    Science.gov (United States)

    1994-07-13

    of Discharge For a Nanometer-Scale Ag/Cu Galvanic Cell . Metal particles, prepared by the technique described above, are ideally suited to...Figure 6, essentially constitutes a macroscopic model for the nanometer-scale galvanic cell shown in the STM image of Figure 4. Copper and silver wires...Scanning Tunneling Microscope’, Appl. Phys. Lett., 60, 1181-1183. (14) Li, W.; Virtanen, J. A.; Penner, R. M., (1992) ’A Nanometer-Scale Galvanic Cell ’, J

  14. ANALYSIS AND CHARACTERIZATION OF MICROSCOPIC MORPHOLOGY AND ORIENTATION STRUCTURE OF POLYANILINE POLYMERIZED IN A CONSTANT MAGNETIC FIELD

    Institute of Scientific and Technical Information of China (English)

    Li Ma; Wei Lu; Ke-long Huang; Meng-yu Gan; Chao Chen; Jun Yan

    2009-01-01

    Conductive polyaniline (Pan-M and Pan-O) doped with dodecylbenzene sulfonic acid (DBSA) was synthesized by using emulsion polymerization method in the presence of a constant magnetic field (0.4 T) and the absence of magnetic field, respectively. The effects of magnetic field on the microscopic morphology and orientation structure of Pan were generally analyzed and characterized by using transmission electron microscope (TEM), X-ray diffraction (XRD) and through the conductivity anisotropy of unit resistance of the Pan/PVA(polyvinyl alcohol) composite film. The results showed that, compared with Pan-O, Pan-M had higher crystallinity and more obvious microscopic orientation structure: its particles were arranged orderly and piled into many banded aggregates with a certain length/diameter ratio, after magnetization treatment, it demonstrated a high degree of consistent orientation; Pan-M/PVA composite films showed conductivity anisotropy after magnetization in the film-forming process. The results all fully confirmed that Pan prepared in a magnetic field condition had a high degree of orientation.

  15. Microscopic resolution imaging and proteomics correlation at histogeographically identical location: point by point correlation between ex vivo tissue imaging with high field MRI and multiplex tissue immunoblotting for proteomics profiling

    Science.gov (United States)

    Matsuda, Kant M.; Chung, Joon-Yong; Ylaya, Kris; Dodd, Stephen; Fukunaga, Masaki; Hewitt, Stephen M.

    2010-03-01

    Histopathologic correlation is an essential component for validation of the radiological findings. There has been significant advancement in medical imaging technologies, including molecular imaging, such that, it is essential to establish the system beyond histopathologic correlation, to protein profiling that can be correlated with imaging at anatomically identical manner for accurate examination. Recently, a novel technology for proteomic profiling has been established, called "multiplex tissue immunoblotting (MTIB)" which can offer studying multiple protein expression from a single histology slide. Therefore, we attempted to establish the system to obtain an identical plane between high resolution imaging and histopathology at microscopic level so that proteomic profiling can be readily performed using MTIB. A variety of tissues were obtained from autopsy materials and initially scanned with high field MRI (14T) ex vivo along with the marker for tissue orientation. The histology slides were prepared from post-scanned tissue under the marker-guidance in order to obtain an identical plane with high resolution imaging. Subsequently, MTIB was carried out to study expression of proteins of interest and point by point correlation with high resolution imaging was performed at histogeographically identical manner.

  16. Atomic force microscopic study of the structure of high-density polyethylene deformed in liquid medium by crazing mechanism.

    Science.gov (United States)

    Bagrov, D V; Yarysheva, A Y; Rukhlya, E G; Yarysheva, L M; Volynskii, A L; Bakeev, N F

    2014-02-01

    A procedure has been developed for the direct atomic force microscopic (AFM) examination of the native structure of high-density polyethylene (HDPE) deformed in an adsorption-active liquid medium (AALM) by the crazing mechanism. The AFM investigation has been carried out in the presence of a liquid medium under conditions preventing deformed films from shrinkage. Deformation of HDPE in AALM has been shown to proceed through the delocalized crazing mechanism and result in the development of a fibrillar-porous structure. The structural parameters of the crazed polymer have been determined. The obtained AFM images demonstrate a nanosized nonuniformity of the deformation and enable one to observe the structural rearrangements that take place in the deformed polymer after removal of the liquid medium and stress relaxation. A structural similarity has been revealed between HDPE deformed in the AALM and hard elastic polymers.

  17. Structural variability of E. coli thioredoxin captured in the crystal structures of single-point mutants

    Science.gov (United States)

    Noguera, Martín E.; Vazquez, Diego S.; Ferrer-Sueta, Gerardo; Agudelo, William A.; Howard, Eduardo; Rasia, Rodolfo M.; Manta, Bruno; Cousido-Siah, Alexandra; Mitschler, André; Podjarny, Alberto; Santos, Javier

    2017-02-01

    Thioredoxin is a ubiquitous small protein that catalyzes redox reactions of protein thiols. Additionally, thioredoxin from E. coli (EcTRX) is a widely-used model for structure-function studies. In a previous paper, we characterized several single-point mutants of the C-terminal helix (CTH) that alter global stability of EcTRX. However, spectroscopic signatures and enzymatic activity for some of these mutants were found essentially unaffected. A comprehensive structural characterization at the atomic level of these near-invariant mutants can provide detailed information about structural variability of EcTRX. We address this point through the determination of the crystal structures of four point-mutants, whose mutations occurs within or near the CTH, namely L94A, E101G, N106A and L107A. These structures are mostly unaffected compared with the wild-type variant. Notably, the E101G mutant presents a large region with two alternative traces for the backbone of the same chain. It represents a significant shift in backbone positions. Enzymatic activity measurements and conformational dynamics studies monitored by NMR and molecular dynamic simulations show that E101G mutation results in a small effect in the structural features of the protein. We hypothesize that these alternative conformations represent samples of the native-state ensemble of EcTRX, specifically the magnitude and location of conformational heterogeneity.

  18. [Membrana interossea antebrachii--a common ligament of the radius-ulna joint. II: Submacroscopic and microscopic structure].

    Science.gov (United States)

    Küsswetter, W; Schmid, K

    1979-10-01

    The membrana interossea natebrachii was investigated submacroscopically and microscopically in human cadaveric specimens. Stereomicroscopical and histological investigations under polarized and non-polarized light were performed. Due to the textological structure and due to its osseous insertion the membrana interossea antebrachii represents in its middle and proximal part all morphological features of an interosseous ligament with uniform direction of its fibers. In this middle and proximal part the membrana interossea has to be regarded as a strong ligament coordinating both radioulnar joints which act by the cardan shaft of the forearm as a functional unit.

  19. Microscopic structure of high-spin vibrational states in superdeformed A=190 nuclei

    Energy Technology Data Exchange (ETDEWEB)

    Nakatsukasa, Takashi [Chalk River Labs., Ontario (Canada); Matsuyanagi, Kenichi [Kyoto Univ. (Japan); Mizutori, Shoujirou [Oak Ridge National Lab., TN (United States)] [and others

    1996-12-31

    Microscopic RPA calculations based on the cranked shell model are performed to investigate the quadrupole and octupole correlations for excited superdeformed (SD) bands in even-even A=190 nuclei. The K = 2 octupole vibrations are predicted to be the lowest excitation modes at zero rotational frequency. The Coriolis coupling at finite frequency produces different effects depending on the neutron and proton number of nucleus. The calculations also indicate that some collective excitations may produce moments of inertia almost identical to those of the yrast SD band. An interpretation of the observed excited bands invoking the octupole vibrations is proposed, which suggests those octupole vibrations may be prevalent in even-even SD A=190 nuclei.

  20. Microscopic observation of carrier-transport dynamics in quantum-structure solar cells using a time-of-flight technique

    Energy Technology Data Exchange (ETDEWEB)

    Toprasertpong, Kasidit; Fujii, Hiromasa; Sugiyama, Masakazu; Nakano, Yoshiaki [School of Engineering, The University of Tokyo, Bunkyo-ku, Tokyo 113-0032 (Japan); Kasamatsu, Naofumi; Kada, Tomoyuki; Asahi, Shigeo; Kita, Takashi [Graduate School of Engineering, Kobe University, Nada-ku, Kobe 657-8501 (Japan); Wang, Yunpeng; Watanabe, Kentaroh [Research Center for Advanced Science and Technology, The University of Tokyo, Meguro-ku, Tokyo 153-8904 (Japan)

    2015-07-27

    In this study, we propose a carrier time-of-flight technique to evaluate the carrier transport time across a quantum structure in an active region of solar cells. By observing the time-resolved photoluminescence signal with a quantum-well probe inserted under the quantum structure at forward bias, the carrier transport time can be efficiently determined at room temperature. The averaged drift velocity shows linear dependence on the internal field, allowing us to estimate the quantum structure as a quasi-bulk material with low effective mobility containing the information of carrier dynamics. We show that this direct and real-time observation is more sensitive to carrier transport than other conventional techniques, providing better insights into microscopic carrier transport dynamics to overcome a device design difficulty.

  1. Building Points - Montana Structures/Addresses Framework - Web Service

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Map service for the Montana Structures MSDI Framework. The service will only display at scales of 1:100,000 or larger. Structures are grouped into general categories...

  2. Building Points - Montana Structures/Addresses Framework - Web Service

    Data.gov (United States)

    NSGIC State | GIS Inventory — Map service for the Montana Structures MSDI Framework. The service will only display at scales of 1:100,000 or larger. Structures are grouped into general categories...

  3. Microscope basics.

    Science.gov (United States)

    Sluder, Greenfield; Nordberg, Joshua J

    2013-01-01

    This chapter provides information on how microscopes work and discusses some of the microscope issues to be considered in using a video camera on the microscope. There are two types of microscopes in use today for research in cell biology-the older finite tube-length (typically 160mm mechanical tube length) microscopes and the infinity optics microscopes that are now produced. The objective lens forms a magnified, real image of the specimen at a specific distance from the objective known as the intermediate image plane. All objectives are designed to be used with the specimen at a defined distance from the front lens element of the objective (the working distance) so that the image formed is located at a specific location in the microscope. Infinity optics microscopes differ from the finite tube-length microscopes in that the objectives are designed to project the image of the specimen to infinity and do not, on their own, form a real image of the specimen. Three types of objectives are in common use today-plan achromats, plan apochromats, and plan fluorite lenses. The concept of mounting video cameras on the microscope is also presented in the chapter. Copyright © 2003 Elsevier Inc. All rights reserved.

  4. Realization of the Lepton Flavor Structure from Point Interactions

    CERN Document Server

    Fujimoto, Yukihiro; Sakamoto, Makoto; Takahashi, Ryo

    2014-01-01

    We investigate a 5d gauge theory on $S^1$ with point interactions. The point interactions describe extra boundary conditions and provide three generations, the charged lepton mass hierarchy, the lepton flavor mixing and tiny degenerated neutrino masses after choosing suitable boundary conditions and parameters. The existence of the restriction in the flavor mixing, which appears from the configuration of the extra dimension, is one of the features of this model. Tiny Yukawa couplings for the neutrinos also appears without the see-saw mechanism nor symmetries in our model. The magnitude of CP violation in the leptons can be a prediction and is consistent with the current experimental data.

  5. Microscopic structure and interaction analysis for supercritical carbon dioxide-ethanol mixtures: a Monte Carlo simulation study.

    Science.gov (United States)

    Xu, Wenhao; Yang, Jichu; Hu, Yinyu

    2009-04-01

    Configurational-bias Monte Carlo simulations in the isobaric-isothermal ensemble using the TraPPE-UA force field were performed to study the microscopic structures and molecular interactions of mixtures containing supercritical carbon dioxide (scCO(2)) and ethanol (EtOH). The binary vapor-liquid coexisting curves were calculated at 298.17, 333.2, and 353.2 K and are in excellent agreement with experimental results. For the first time, three important interactions, i.e., EtOH-EtOH hydrogen bonding, EtOH-CO(2) hydrogen bonding, and EtOH-CO(2) electron donor-acceptor (EDA) bonding, in the mixtures were fully analyzed and compared. The EtOH mole fraction, temperature, and pressure effect on the three interactions was investigated and then explained by the competition of interactions between EtOH and CO(2) molecules. Analysis of the microscopic structures indicates a strong preference for the formation of EtOH-CO(2) hydrogen-bonded tetramers and pentamers at higher EtOH compositions. The distribution of aggregation sizes and types shows that a very large EtOH-EtOH hydrogen-bonded network exists in the mixtures, while only linear EtOH-CO(2) hydrogen-bonded and EDA-bonded dimers and trimers are present. Further analysis shows that EtOH-CO(2) EDA complex is more stable than the hydrogen-bonded one.

  6. Water-Structure Interactions on a Point Absorber

    DEFF Research Database (Denmark)

    Jakobsen, Morten Møller

    been the primary catalyst to more successful work later and may be helpful to others working in laboratory. The purpose of the experiments is to examine the wave and current induced loads on a floating point absorber (wave energy converter). Wave energy converters are used in ocean- or costal regions...

  7. Microwave Microscope

    Data.gov (United States)

    Federal Laboratory Consortium — FUNCTION: Makes ultra-high-resolution field measurements. The Microwave Microscope (MWM) has been used in support of several NRL experimental programs involving sea...

  8. Microscopic Structure of Shocks and Antishocks in the ASEP Conditioned on Low Current

    Science.gov (United States)

    Belitsky, V.; Schütz, G. M.

    2013-07-01

    We study the time evolution of the ASEP on a one-dimensional torus with L sites, conditioned on an atypically low current up to a finite time t. For a certain one-parameter family of initial measures with a shock we prove that the shock position performs a biased random walk on the torus and that the measure seen from the shock position remains invariant. We compute explicitly the transition rates of the random walk. For the large scale behavior this result suggests that there is an atypically low current such that the optimal density profile that realizes this current is a hyperbolic tangent with a traveling shock discontinuity. For an atypically low local current across a single bond of the torus we prove that a product measure with a shock at an arbitrary position and an antishock at the conditioned bond remains a convex combination of such measures at all times which implies that the antishock remains microscopically stable under the locally conditioned dynamics. We compute the coefficients of the convex combinations.

  9. Micropore Structure Representation of Sandstone in Petroleum Reservoirs Using an Atomic Force Microscope

    Institute of Scientific and Technical Information of China (English)

    BAI Yong-Qiang; ZHU Xing; WU Jun-Zheng; BAI Wen-Guang

    2011-01-01

    @@ The pore structure of sandstone in an oil reservoir is investigated using atomic force microscopy(AFM).At nanoscale resolution,AFM images of sandstone show us the fine structure.The real height data of images display the three-dimensional space structure of sandstone effectively.The three-dimensional analysis results show that the AFM images of sandstone have unique characteristics that,like fingerprints,can identify different structural properties of sandstones.The results demonstrate that AFM is an effective method used to represent original sandstone in petroleum reservoirs,and may help geologists to appreciate the sandstone in oil reservoirs fully.

  10. Manipulation of adsorbed atoms and creation of new structures on room-temperature surfaces with a scanning tunneling microscope.

    Science.gov (United States)

    Whitman, L J; Stroscio, J A; Dragoset, R A; Celotta, R J

    1991-03-01

    A general method of manipulating adsorbed atoms and molecules on room-temperature surfaces with the use of a scanning tunneling microscope is described. By applying an appropriate voltage pulse between the sample and probe tip, adsorbed atoms can be induced to diffuse into the region beneath the tip. The field-induced diffusion occurs preferentially toward the tip during the voltage pulse because of the local potential energy gradient arising from the interaction of the adsorbate dipole moment with the electric field gradient at the surface. Depending upon the surface and pulse parameters, cesium (Cs) structures from one nanometer to a few tens of nanometers across have been created in this way on the (110) surfaces of gallium arsenide (GaAs) and indium antimonide (InSb), including structures that do not naturally occur.

  11. Three-dimensional periodic dielectric structures having photonic Dirac points

    Energy Technology Data Exchange (ETDEWEB)

    Bravo-Abad, Jorge; Joannopoulos, John D.; Soljacic, Marin

    2015-06-02

    The dielectric, three-dimensional photonic materials disclosed herein feature Dirac-like dispersion in quasi-two-dimensional systems. Embodiments include a face-centered cubic (fcc) structure formed by alternating layers of dielectric rods and dielectric slabs patterned with holes on respective triangular lattices. This fcc structure also includes a defect layer, which may comprise either dielectric rods or a dielectric slab with patterned with holes. This defect layer introduces Dirac cone dispersion into the fcc structure's photonic band structure. Examples of these fcc structures enable enhancement of the spontaneous emission coupling efficiency (the .beta.-factor) over large areas, contrary to the conventional wisdom that the .beta.-factor degrades as the system's size increases. These results enable large-area, low-threshold lasers; single-photon sources; quantum information processing devices; and energy harvesting systems.

  12. Confocal scanning laser microscopic study of the RDX defect structure in deformed polymer-bonded explosives

    NARCIS (Netherlands)

    Heijden, A.E.D.M. van der; Bouma, R.H.B.

    2016-01-01

    The influence of an explosion-driven deformation on the defect structure in RDX crystals embedded in a polymer-bonded explosive was investigated by means of confocal scanning laser microscopy. The images were compared to the defect structure in the as-received RDX grades, embedded

  13. Microscopic study of the structure of the Steel Ni-based Alloy: Hastelloy G35 Alloy

    Science.gov (United States)

    Sabir, F.; Ben Lenda, O.; Saissi, S.; Marbouh, K.; Tyouke, B.; Zerrouk, L.; Ibnlfassi, A.; Ouzaouit, K.; Elmadani, S.

    2017-03-01

    The study of the influence of heat treatment on changes of mechanical and structural properties of Steel Ni-based Alloy is a highly interdisciplinary topic at the interface of the physical chemistry of metallic materials, which also helps in environmental and economic protection.After heat treatment, the structural and micro-structural studies for the different transformation temperature led to identify phases formed and the morphology. This work has been carried out using different techniques: X-ray diffraction, optical microscopy and scanning electron microscopy.

  14. Crystal Structure of CD155 and Electron Microscopic Studies of Its Complexes with Polioviruses

    National Research Council Canada - National Science Library

    Ping Zhang; Steffen Mueller; Marc C. Morais; Carol M. Bator; Valorie D. Bowman; Susan Hafenstein; Eckard Wimmer; Michael G. Rossmann

    2008-01-01

    .... These structures show that, compared with human rhinoviruses, the virus-receptor interactions for PVs have a greater dependence on hydrophobic interactions, as might be required for a virus that can...

  15. Surface imaging microscope

    Science.gov (United States)

    Rogala, Eric W.; Bankman, Isaac N.

    2008-04-01

    The three-dimensional shapes of microscopic objects are becoming increasingly important for battlespace CBRNE sensing. Potential applications of microscopic 3D shape observations include characterization of biological weapon particles and manufacturing of micromechanical components. Aerosol signatures of stand-off lidar systems, using elastic backscatter or polarization, are dictated by the aerosol particle shapes and sizes that must be well characterized in the lab. A low-cost, fast instrument for 3D surface shape microscopy will be a valuable point sensor for biological particle sensing applications. Both the cost and imaging durations of traditional techniques such as confocal microscopes, atomic force microscopes, and electron scanning microscopes are too high. We investigated the feasibility of a low-cost, fast interferometric technique for imaging the 3D surface shape of microscopic objects at frame rates limited only by the camera in the system. The system operates at two laser wavelengths producing two fringe images collected simultaneously by a digital camera, and a specialized algorithm we developed reconstructs the surface map of the microscopic object. The current implementation assembled to test the concept and develop the new 3D reconstruction algorithm has 0.25 micron resolution in the x and y directions, and about 0.1 micron accuracy in the z direction, as tested on a microscopic glass test object manufactured with etching techniques. We describe the interferometric instrument, present the reconstruction algorithm, and discuss further development.

  16. Molecular, mesoscopic and microscopic structure evolution during amylase digestion of maize starch granules.

    Science.gov (United States)

    Shrestha, Ashok K; Blazek, Jaroslav; Flanagan, Bernadine M; Dhital, Sushil; Larroque, Oscar; Morell, Matthew K; Gilbert, Elliot P; Gidley, Michael J

    2012-09-01

    Cereal starch granules with high (>50%) amylose content are a promising source of nutritionally desirable resistant starch, i.e. starch that escapes digestion in the small intestine, but the structural features responsible are not fully understood. We report the effects of partial enzyme digestion of maize starch granules on amylopectin branch length profiles, double and single helix contents, gelatinisation properties, crystallinity and lamellar periodicity. Comparing results for three maize starches (27, 57, and 84% amylose) that differ in both structural features and amylase-sensitivity allows conclusions to be drawn concerning the rate-determining features operating under the digestion conditions used. All starches are found to be digested by a side-by-side mechanism in which there is no major preference during enzyme attack for amylopectin branch lengths, helix form, crystallinity or lamellar organisation. We conclude that the major factor controlling enzyme susceptibility is granule architecture, with shorter length scales not playing a major role as inferred from the largely invariant nature of numerous structural measures during the digestion process (XRD, NMR, SAXS, DSC, FACE). Results are consistent with digestion rates being controlled by restricted diffusion of enzymes within densely packed granular structures, with an effective surface area for enzyme attack determined by external dimensions (57 or 84% amylose - relatively slow) or internal channels and pores (27% amylose - relatively fast). Although the process of granule digestion is to a first approximation non-discriminatory with respect to structure at molecular and mesoscopic length scales, secondary effects noted include (i) partial crystallisation of V-type helices during digestion of 27% amylose starch, (ii) preferential hydrolysis of long amylopectin branches during the early stage hydrolysis of 27% and 57% but not 84% amylose starches, linked with disruption of lamellar repeating structure

  17. Best Entry Points for Structured Document Retrieval - Part I: Characteristics

    DEFF Research Database (Denmark)

    Reid, Jane; Lalmas, Mounia; Finesilver, Karen

    2006-01-01

    Structured document retrieval makes use of document components as the basis of the retrieval process, rather than complete documents. The inherent relationships between these components make it vital to support users' natural browsing behaviour in order to offer effective and efficient access...

  18. Molecular dynamics simulations of microscopic structure of ultra strong shock waves in dense helium

    Science.gov (United States)

    Liu, Hao; Kang, Wei; Zhang, Qi; Zhang, Yin; Duan, Huilin; He, X. T.

    2016-12-01

    Hydrodynamic properties and structure of strong shock waves in classical dense helium are simulated using non-equilibrium molecular dynamics methods. The shock speed in the simulation reaches 100 km/s and the Mach number is over 250, which are close to the parameters of shock waves in the implosion process of inertial confinement fusion. The simulations show that the high-Mach-number shock waves in dense media have notable differences from weak shock waves or those in dilute gases. These results will provide useful information on the implosion process, especially the structure of strong shock wave front, which remains an open question in hydrodynamic simulations.

  19. Size structure, not metabolic scaling rules, determines fisheries reference points

    DEFF Research Database (Denmark)

    Andersen, Ken Haste; Beyer, Jan

    2015-01-01

    that even though small species have a higher productivity than large species their resilience towards fishing is lower than expected from metabolic scaling rules. Further, we show that the fishing mortality leading to maximum yield per recruit is an ill-suited reference point. The theory can be used...... these empirical relations is lacking. Here, we combine life-history invariants, metabolic scaling and size-spectrum theory to develop a general size- and trait-based theory for demography and recruitment of exploited fish stocks. Important concepts are physiological or metabolic scaled mortalities and flux...... of individuals or their biomass to size. The theory is based on classic metabolic relations at the individual level and uses asymptotic size W∞ as a trait. The theory predicts fundamental similarities and differences between small and large species in vital rates and response to fishing. The central result...

  20. Microscopic theories of the structure and glassy dynamics of ultra-dense hard sphere fluids

    Science.gov (United States)

    Jadrich, Ryan; Schweizer, Kenneth

    2013-03-01

    We construct a new thermodynamically self-consistent integral equation theory (IET) for the equilibrium metastable fluid structure of monodisperse hard spheres that incorporates key features of the jamming transition. A two Yukawa generalized mean spherical IET closure for the direct correlation function tail is employed to model the distinctive short and long range contributions for highly compressed fluids. The exact behavior of the contact value of the radial distribution function (RDF) and isothermal compressibility are enforced, as well as an approximate theory for the RDF contact derivative. Comparison of the theoretical results for the real and Fourier space structure with nonequilibrium jammed simulations reveals many similarities, but also differences as expected. The new structural theory is used as input into the nonlinear Langevin equation (NLE) theory of activated single particle dynamics to study the alpha relaxation time, and good agreement with recent experiments and simulations is found. We demonstrate it is crucial to accurately describe the very high wave vector Fourier space to reliably extract the dynamical predictions of NLE theory, and structural precursors of jamming play an important role in determining entropic barriers.

  1. [State of the microscopic and crystalline structures, the microhardness and mineral saturation of human bone tissue after prolonged space flight].

    Science.gov (United States)

    Gazenko, O G; Prokhonchukov, A A; Panikarovskiĭ, V V; Tigranian, R A; Kolesnik, A G

    1977-01-01

    The bone tissue removed by autopsy from the crewmembers of the orbital station Salyut-1 after their 23-day space flight was investigated histologically, crystallographically, biophysically and biochemically. The comprehensive studies showed good correlation of the parameters studied. The microscopic and crystalline structures of bone tissue of every skeletal bone tested (ox calcis, frmoral epiphysis and diaphysis, vertebrae, ribs, sternum) did not differ from the normal. The data were in agreement with the parameters of bone microhardness and mineralization which also remained within the normal limits. No pathological changes in the above parameters were noted. Greater packing of the crystal lattice, increased microhardness and mineralization of bone tissue can be attributed to the effect of exercises.

  2. Finite-size effects in the microscopic structure of a hard-sphere fluid in a narrow cylindrical pore.

    Science.gov (United States)

    Román, F L; White, J A; González, A; Velasco, S

    2006-04-21

    We examine the microscopic structure of a hard-sphere fluid confined to a small cylindrical pore by means of Monte Carlo simulation. In order to analyze finite-size effects, the simulations are carried out in the framework of different statistical mechanics ensembles. We find that the size effects are specially relevant in the canonical ensemble where noticeable differences are found with the results in the grand canonical ensemble (GCE) and the isothermal isobaric ensemble (IIE) which, in most situations, remain very close to the infinite system results. A customary series expansion in terms of fluctuations of either the number of particles (GCE) or the inverse volume (IIE) allows us to connect with the results of the canonical ensemble.

  3. New aspects of the structure of human hair on the basis of optical microscopic observations of disassembled hair parts.

    Science.gov (United States)

    Yamauchi, Asao; Yamauchi, Kiyoshi

    2015-01-01

    Infant' and adult' scalp hair fibers were disassembled to various cellular components and blocks by chemical and enzymatic treatments, followed by random scission with rapidly rotating cutters. The hair fibers were also fractured by the use of a vise. The optical microscopic inspection of these specimens led to the discovery of many previously unknown structures in the hair shaft. In particular, a cuticular cell (Cu) was found to take a trowel-like shape consisting of a part with a blade-like shape (CuB) and a part with a handle-like shape (CuH), where CuB overlapped one another and fused partially to build the honeycomb-like structure on a large cuticular thin plate (CuP). Whereas CuH was closely similar to the cortical cell in dimensions and richness of macrofibrils (Mf). It was considered that human hair is stabilized structurally and physicochemically by the presence of the honeycomb-like structure, the CuP and the Mf.

  4. Synchrotron radiation and structure biology. From the instrumentation view point

    Energy Technology Data Exchange (ETDEWEB)

    Sakabe, N. [Tsukuba Univ., Ibaraki (Japan). Inst. of Applied Biochemistry

    1996-12-31

    Structure Biology is based on a three dimensional macromolecule structures, the most of which are studied by x-ray crystal structure analysis. Synchrotron radiation X-rays are quite strong, tunable, very parallel and pico-second order bunch and are very suitable for diffraction data collection of macromolecular crystals. To collect accurate data at high resolution from large unit cell protein crystals using SR, we made screenless large Weissenberg cameras with imaging plates at the PF. 146 research projects using this data collection system were running in 1995. They include 51 projects from 11 overseas countries. Recently we have developed user-friendly type Weissenberg camera for the structure biology project of TARA (Tsukuba Advanced Research Alliance), and installed it at BL6B of the PF. Cylindrical cassette radius of this new camera is 575.7mm and two large format (400x800mm) imaging plates (IP) can be fixed into the cassette by suction from back side. However, the system is not automatic and manual tasks to be performed are heavy. Therefore an automation of the system is very urgent to maintain accuracy and resolution. We are now developing a high accuracy, high resolution and high speed automated data collection system. This fully automated system consists of a camera, an IP reader equipped with 8 reading heads, an IP eraser, and a cassette transportation mechanism. In the new system, one imaging plate is fixed inside of a movable cylindrical cassette. The cassette presenting 16 rectangular holes, direct beam injection of i.e. 1.0A X-rays would produce 8 images of data at 2.6A resolutions. As 2 cassettes can be used simultaneously on the cassette transportation system, one cassette is being read while the other one is being exposed, therefore completely removing the reading bottleneck problem. This system therefore permits to use the radiation with the maximum of efficiency, and reduce the manpower necessary for data recording. (author)

  5. Microscopic Structure of Rabbit Hair%家兔绒毛的显微结构研究

    Institute of Scientific and Technical Information of China (English)

    郭天芬; 王欣荣; 李维红; 牛春娥

    2012-01-01

    [目的]了解家兔绒毛的显微形态结构,[方法]选择具有典型特征的单根家兔绒毛,从尖部到根部对其进行显微结构观察,并检测其纤维直径.[结果]家兔绒毛的毛尖由鳞片层和皮质层组成,无髓质层;中部一般由鳞片层、皮质层和髓质层组成;根部无髓质层,鳞片层呈麦穗状.这是家兔绒毛的特性,可用于与其他动物纤维的比较研究及种类鉴别.兔毛具有发达的髓质层,纤维直径与髓腔列数成正相关.绒毛一般为单列,粗毛为多列.单根兔绒的尖部最细,中部变粗,根部又变细,且各部分直径差异较大,外形生长特性呈纺锤形.[结论]利用生物显微镜法鉴别不同动物毛皮及其产品种类是较为客观、简便的方法.%[ Objective ] The paper was to explore the microscopic structure of rabbit hair. [ Method ] Single rabbit hair with typical features was selected to observe its microscopic structure from tip to root, and its fiber diameter was also measured. [Result] The rabbit hair tip was constituted by scale layer and cortical layer, without medullary layer; the middle part was generally constituted by scale layer, cortical layer and medullary layer; the root had no medullary layer, and the scale layer was wheatear-shaped. This was the property of rabbit hair, which could be used for comparative studies with other animal fiber and species identification. Rabbit hair had developed medullary layer, and fiber diameter was positively related to column number of medullary cavity. The hair generally was single column, and coarse hair was multi-column. Single rabbit hair was the finest in the tip, coarse in the middle and tapering in the root. The diameter difference of various parts was large, the external growth characteristics was spindle-shaped. [Conclusion] Using biological microscope method to identify different animal fur and product species is more objective and simple.

  6. Microscopic structure and properties changes of cassava stillage residue pretreated by mechanical activation.

    Science.gov (United States)

    Liao, Zhengda; Huang, Zuqiang; Hu, Huayu; Zhang, Yanjuan; Tan, Yunfang

    2011-09-01

    This study has focused on the pretreatment of cassava stillage residue (CSR) by mechanical activation (MA) using a self-designed stirring ball mill. The changes in surface morphology, functional groups and crystalline structure of pretreated CSR were examined by using scanning electron microscopy (SEM), Fourier transform infrared (FTIR) spectroscopy and X-ray diffraction (XRD) under reasonable conditions. The results showed that MA could significantly damage the crystal structure of CSR, resulting in the variation of surface morphology, the increase of amorphous region ratio and hydrogen bond energy, and the decrease in crystallinity and crystalline size. But no new functional groups generated during milling, and the crystal type of cellulose in CSR still belonged to cellulose I after MA.

  7. Effects of molecular structure on microscopic heat transport in chain polymer liquids

    Energy Technology Data Exchange (ETDEWEB)

    Matsubara, Hiroki, E-mail: matsubara@microheat.ifs.tohoku.ac.jp; Kikugawa, Gota; Ohara, Taku [Institute of Fluid Science, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai 980-8577 (Japan); Bessho, Takeshi; Yamashita, Seiji [Higashifuji Technical Center, Toyota Motor Corporation, 1200 Mishuku, Susono, Shizuoka 410-1193 (Japan)

    2015-04-28

    In this paper, we discuss the molecular mechanism of the heat conduction in a liquid, based on nonequilibrium molecular dynamics simulations of a systematic series of linear- and branched alkane liquids, as a continuation of our previous study on linear alkane [T. Ohara et al., J. Chem. Phys. 135, 034507 (2011)]. The thermal conductivities for these alkanes in a saturated liquid state at the same reduced temperature (0.7T{sub c}) obtained from the simulations are compared in relation to the structural difference of the liquids. In order to connect the thermal energy transport characteristics with molecular structures, we introduce the new concept of the interatomic path of heat transfer (atomistic heat path, AHP), which is defined for each type of inter- and intramolecular interaction. It is found that the efficiency of intermolecular AHP is sensitive to the structure of the first neighbor shell, whereas that of intramolecular AHP is similar for different alkane species. The dependence of thermal conductivity on different lengths of the main and side chain can be understood from the natures of these inter- and intramolecular AHPs.

  8. Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses.

    Science.gov (United States)

    Zhang, Ping; Mueller, Steffen; Morais, Marc C; Bator, Carol M; Bowman, Valorie D; Hafenstein, Susan; Wimmer, Eckard; Rossmann, Michael G

    2008-11-25

    When poliovirus (PV) recognizes its receptor, CD155, the virus changes from a 160S to a 135S particle before releasing its genome into the cytoplasm. CD155 is a transmembrane protein with 3 Ig-like extracellular domains, D1-D3, where D1 is recognized by the virus. The crystal structure of D1D2 has been determined to 3.5-A resolution and fitted into approximately 8.5-A resolution cryoelectron microscopy reconstructions of the virus-receptor complexes for the 3 PV serotypes. These structures show that, compared with human rhinoviruses, the virus-receptor interactions for PVs have a greater dependence on hydrophobic interactions, as might be required for a virus that can inhabit environments of different pH. The pocket factor was shown to remain in the virus during the first recognition stage. The present structures, when combined with earlier mutational investigations, show that in the subsequent entry stage the receptor moves further into the canyon when at a physiological temperature, thereby expelling the pocket factor and separating the viral subunits to form 135S particles. These results provide a detailed analysis of how a nonenveloped virus can enter its host cell.

  9. Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Ping; Mueller, Steffen; Morais, Marc C.; Bator, Carol M.; Bowman, Valorie D.; Hafenstein, Susan; Wimmer, Eckard; Rossmann, Michael G. (SBU); (Purdue)

    2010-11-02

    When poliovirus (PV) recognizes its receptor, CD155, the virus changes from a 160S to a 135S particle before releasing its genome into the cytoplasm. CD155 is a transmembrane protein with 3 Ig-like extracellular domains, D1-D3, where D1 is recognized by the virus. The crystal structure of D1D2 has been determined to 3.5-{angstrom} resolution and fitted into {approx}8.5-{angstrom} resolution cryoelectron microscopy reconstructions of the virus-receptor complexes for the 3 PV serotypes. These structures show that, compared with human rhinoviruses, the virus-receptor interactions for PVs have a greater dependence on hydrophobic interactions, as might be required for a virus that can inhabit environments of different pH. The pocket factor was shown to remain in the virus during the first recognition stage. The present structures, when combined with earlier mutational investigations, show that in the subsequent entry stage the receptor moves further into the canyon when at a physiological temperature, thereby expelling the pocket factor and separating the viral subunits to form 135S particles. These results provide a detailed analysis of how a nonenveloped virus can enter its host cell.

  10. Analyzing Jennie Gerhardt by A Point of Structuralism

    Institute of Scientific and Technical Information of China (English)

    杨雪梅

    2016-01-01

    Jennie Gerhardt is an American realistic fiction and is Theodore Dreiser’s second long novel after Sister Carrie published. Theodore Dreiser is a pioneer of American realism and a naturalist so that his works are all almost related to people’s life in America, for example, The Financier, The Titan, The“Genius”, An American Tragedy and so on, these all reflect the real life of America through some stories. And how to use American structuralism to decode this story, which is a core of this paper.

  11. Industrial safety of pressure vessels - structural integrity point of view

    Directory of Open Access Journals (Sweden)

    Sedmak Aleksandar

    2016-01-01

    Full Text Available This paper presents different aspects of pressure vessel safety in the scope of industrial safety, focused to the chemical industry. Quality assurance, including application of PED97/23 has been analysed first, followed shortly by the risk assessment and in details by the structural integrity approach, which has been illustrated with three case studies. One important conclusion, following such an approach, is that so-called water proof testing can actually jeopardize integrity of a pressure vessel instead of proving it. [Projekat Ministarstva nauke Republike Srbije, br. TR 174004 i br. TR 33044

  12. Structure of a fluid interface near the critical point

    Science.gov (United States)

    Schmidt, James W.

    1988-01-01

    The structure of the liquid-liquid interface of three very different mixtures (carbon disulfide + methanol, methanol + cyclohexane + deuterated cyclohexane, and nitrobenzene + n-decane) has been studied using ellipsometry in the reduced temperature range between 0.0009 and 0.042. Although the elliptical thickness varies by an order of magnitude between these mixtures, the data from all three mixtures can be scaled to the same universal constant by a combined mean-field plus capillary-wave model of the interface. The universal constant determined experimentally is significantly less than the theoretical value.

  13. Microscopic Calculation of the Inclusive Electron Scattering Structure Function in 16O

    Science.gov (United States)

    Mihaila, Bogdan; Heisenberg, Jochen H.

    2000-02-01

    We calculate the charge form factor and the longitudinal structure function for 16O and compare with the available experimental data, up to a momentum transfer of 4 fm-1. The ground-state correlations are generated using the coupled-cluster [ exp\\(S\\)] method, together with the realistic v18 NN interaction and the Urbana IX three-nucleon interaction. Center-of-mass corrections are dealt with by adding a center-of-mass Hamiltonian to the usual internal Hamiltonian, and by means of a many-body expansion for the computation of the observables measured in the center-of-mass system.

  14. Microscopic calculation of the inclusive electron scattering structure function in O-16

    CERN Document Server

    Mihaila, B; Mihaila, Bogdan; Heisenberg, Jochen

    2000-01-01

    We calculate the charge form factor and the longitudinal structure function for $^{16}$O and compare with the available experimental data, up to a momentum transfer of 4 fm$^{-1}$. The ground state correlations are generated using the coupled cluster [exp(S}] method, together with the realistic v-18 NN interaction and the Urbana IX three-nucleon interaction. Center-of-mass corrections are dealt with by adding a center-of-mass Hamiltonian to the usual internal Hamiltonian, and by means of a many-body expansion for the computation of the observables measured in the center-of-mass system.

  15. Investigation of band structure of {sup 103,105}Rh using microscopic computational technique

    Energy Technology Data Exchange (ETDEWEB)

    Kumar, Amit, E-mail: akbcw2@gmail.com [Research Scholar, Department of Physics and Electronics, University of Jammu, Jammu-180006 (India); Singh, Suram, E-mail: suramsingh@gmail.com [Assistant Professor, Department of Physics Govt. Degree College, Kathua-184142 (India); Bharti, Arun, E-mail: arunbharti-2003@yahoo.co.in [Professor, Department of Physics and Electronics, University of Jammu, Jammu-180006 (India)

    2015-08-28

    The high-spin structure in {sup 61}Cu nucleus is studied in terms of effective two body interaction. In order to take into account the deformed BCS basis, the basis states are expanded in terms of the core eigenfunctions. Yrast band with some other bands havew been obtained and back-bending in moment of inertia has also been calculated and compared with the available experimental data for {sup 61}Cu nucleus. On comparing the available experimental as well as other theoretical data, it is found that the treatment with PSM provides a satisfactory explanation of the available data.

  16. Structural deteriorations of the human peritoneum during laparoscopic cholecystectomy. A transmission electron microscopic study.

    Science.gov (United States)

    Tarhan, Omer Ridvan; Barut, Ibrahim; Ozogul, Candan; Bozkurt, Serkan; Baykara, Basak; Bulbul, Mahmut

    2013-08-01

    In previous studies, changes in the surface of the peritoneum during laparoscopic surgery are well defined. Nevertheless, almost all of these studies were performed on rodents via scanning electron microscopy. In the present study, structural alterations of the mesothelial cells of peritoneum were examined during laparoscopic cholecystectomy using transmission electron microscopy. Twenty patients with symptomatic cholelithiasis were included in the study. Peritoneal biopsy was performed immediately after CO2 pneumoperitoneum creation and at the end of surgery just before gallbladder removal. Biopsies were taken from the right upper quadrant, i.e., apart from operative manipulation. Peritoneal sample cross-sections were compared using transmission electron microscopy. The carbon dioxide pneumoperitoneum during laparoscopic cholecystectomy caused deteriorations of the peritoneal mesothelium. Apoptosis were developed in mesothelial cells. Bulging of mesothelial cells, irregular cell junctions, focal intercellular clefts, apical cell membrane degeneration, deep nuclear invaginations, and lipid droplets in the cytoplasm of the mesothelial cells were other remarkable findings. Mesothelial edema also was determined. As seen in previous studies, basement membrane nudity appeared after carbon dioxide pneumoperitoneum could be attributable to mesothelial cell apoptosis, deterioration of the cell structure, and cell organelles.

  17. [Scanning microscopical observations on the foregut structures o mosquitoes and their role for the ingestion of microfilariae (author's transl)].

    Science.gov (United States)

    Buse, E; Kuhlow, F

    1979-12-01

    Experiments on the transmission of Brugia malayi by various mosquitoes had shown that microfilariae ingested by some species were badly damaged when they reached the stomach, but were much less hurt in others. The structures of the foregut likely to cause these injuries, were investigated and documented by scanning microscope techniques. In Anopheles albimanus, A. arabiensis, A. stephensi and A. pharoensis which have well developed armatures the microfilariae showed a high rate of destruction. In A. stroparvus as well as in Aedes aegypti, Ae. togoi and Culex fatigans in which these structures are missing or poorly developed the larvae were much less affected. From the size, shape and position of the different papillae, spines, rods and cones observed it can be concluded and confirmed that the pharyngeal armature (buccopharyngeal bar) will be by far the most important structure responsible for the injuries of the microfilariae. However, it appears that the characteristics of different filaria species can play an important role in preventing such damages.

  18. Determination of the structure of $^{31}$Ne by full-microscopic framework

    CERN Document Server

    Minomo, Kosho; Kimura, Masaaki; Ogata, Kazuyuki; Shimizu, Yoshifumi R; Yahiro, Masanobu

    2011-01-01

    We perform the first quantitative analysis of the reaction cross sections of $^{28-32}$Ne by $^{12}$C at 240 MeV/nucleon, using the double-folding model (DFM) with the Melbourne $g$-matrix and the deformed projectile density calculated by the antisymmetrized molecular dynamics (AMD). To describe the tail of the last neutron of $^{31}$Ne, we adopt the resonating group method (RGM) combined with AMD. The theoretical prediction excellently reproduce the measured cross sections of $^{28-32}$Ne with no adjustable parameters. The ground state properties of $^{31}$Ne, i.e., strong deformation and a halo structure with spin-parity $3/2_{}^-$, are clarified.

  19. Microscopic structure of deformed and superdeformed collective bands in rotating nuclei

    Science.gov (United States)

    Kvasil, J.; Iudice, N. Lo; Andreozzi, F.; Knapp, F.; Porrino, A.

    2007-03-01

    We investigate in self-consistent cranked Nilsson plus quasiparticle random-phase approximation the structure of Hg190,192,194 in their evolution from normal to superdeformation and from low to high rotational frequencies. The analysis of the energy levels suggests a splitting of few normally deformed bands into two or more branches. The investigation of the dynamical moments of inertia supports the octupole character of the low-lying negative parity superdeformed bands, in agreement with previous theoretical predictions and experimental findings. As a more direct confirm of their octupole nature, we obtain strong E1 transitions linking those bands to the yrast superdeformed band, in agreement with experiments. A similar result is shown to hold also for Dy152. Like in Dy152, the collectivity of the low-lying scissors mode gets enhanced with the onset of superdeformation.

  20. Microscopic dynamics of structural transition in iron with a nanovoid under shock loading

    Energy Technology Data Exchange (ETDEWEB)

    Shao, J L; Duan, S Q; He, A M; Wang, P; Qin, C S, E-mail: shao_jianli@iapcm.ac.c [Institute of Applied Physics and Computational Mathematics, Beijing 100088 (China)

    2010-09-08

    The shock-induced bcc (body-centered cubic) to hcp (hexagonal-closed packing) transition in iron containing a nanovoid was investigated by molecular dynamics simulations with a shock-front absorbing boundary condition. The results demonstrate the transition time induced by a nanovoid reduces exponentially with increasing shock pressure, which indicates a similar law to the recent experimental observations. Micromorphology evolution of hcp nuclei is presented by the atomic centrosymmetry parameter. A flaky growth pattern along the {l_brace}111{r_brace} planes is observed, while the system finally forms into a laminar structure along the {l_brace}110{r_brace} planes. Furthermore, the atomic mechanical path through the transition is analyzed in detail. It is found that the transformed atoms do cross a shear pressure barrier and then show an over-relaxation of pressure, while their potential increases to a much higher value than bcc atoms.

  1. Structure and Decay at Rapid Proton Capture Waiting Points

    Science.gov (United States)

    Hove, D.; Garrido, E.; Jensen, A. S.; Fynbo, H. O. U.; Fedorov, D. V.; Zinner, N. T.

    2017-01-01

    We investigate the region of the nuclear chart around A ˜eq 70 from a three-body perspective, where we compute reaction rates for the radiative capture of two protons. One key quantity is here the photon dissociation cross section for the inverse process where two protons are liberated from the borromean nucleus by photon bombardment. We find a number of peaks at low photon energy in this cross section where each peak is located at the energy corresponding to population of a three-body resonance. Thus, for these energies the decay or capture processes proceed through these resonances. However, the next step in the dissociation process still has the option of following several paths, that is either sequential decay by emission of one proton at a time with an intermediate two-body resonance as stepping stone, or direct decay into the continuum of both protons simultaneously. The astrophysical reaction rate is obtained by folding of the cross section as function of energy with the occupation probability for a Maxwell-Boltzmann temperature distribution. The reaction rate is then a function of temperature, and of course depending on the underlying three-body bound state and resonance structures. We show that a very simple formula at low temperature reproduces the elaborate numerically computed reaction rate.

  2. Influence of the membrane structure plan shape on the displacements under point load

    Directory of Open Access Journals (Sweden)

    Milošević Vuk S.

    2016-01-01

    Full Text Available Deformations of membrane structures under external loads are much more prominent compared to other structures and structural materials. External area loads cause large displacements and redistribution of internal tension forces. Point loads have a less significant impact on changes of internal forces, but a more significant role in creation of local deformations. Previous researches have shown the influence of position and intensity of point loads on the deformations of membrane structures. The aim of this research is to investigate the influence of plan shape of the membrane structure on the displacements under point load. The influence of rhombic shaped plans with different diagonal lengths and ratios is explored. The research is conducted on numerical models in the specialized software Sofistik. Models are loaded with point loads in the point where diagonals intersect and the results are compared.

  3. Mitochondrial structure in steroid-producing cells: three-dimensional reconstruction of human Leydig cell mitochondria by electron microscopic tomography.

    Science.gov (United States)

    Prince, Frederick P; Buttle, Karolyn F

    2004-05-01

    Mitochondria of human Leydig cells were reconstructed in three dimension utilizing the technique of electron microscopic tomography to obtain a better understanding of the topology of the internal membrane system and the relationship of these cristae to the inner boundary membrane (IBM). Cristae structure, in many respects, is consistent with previous tomographic studies from typical mitochondria, i.e., mitochondria from nonsteroid-producing cells. Cristae are diverse in form, with well-defined lamellar cristae interconnected to pleomorphic and tubular regions. Occasional fenestrations are present in the lamellar regions. Also consistent with other mitochondria studied by tomography, the openings of the cristae to the IBM (referred to as crista junctions) are roughly circular or elliptical and approximately 20-25 nm in diameter. Morphological contact sites between the outer mitochondrial membrane and IBM are also present. Cristae membranes in these steroid-producing mitochondria are often found in close proximity to the IBM. Unique to steroid-producing mitochondria is a form of the cristae in which multiple lamellae are in very close apposition, previously defined as the lamellar association. Tomographic reconstructions of the lamellar association reveal that these well-organized membranes also open to the IBM via crista junctions. These regions of closely apposed lamellar cristae are also interconnected and display small tubular extensions from the lamellae. The current study is the first electron microscopic tomography study of mitochondria from steroid-producing cells. The results show the cristae interconnect to form an extensive internal membrane system, which is perhaps better termed the cristae compartment. This internal membrane system is notable due to the high surface area with few small openings to the IBM. Such a morphology is more analogous to the thylakoid membrane system of chloroplasts than the long-standing view of mitochondrial cristae. The

  4. Hyperspectral confocal microscope.

    Science.gov (United States)

    Sinclair, Michael B; Haaland, David M; Timlin, Jerilyn A; Jones, Howland D T

    2006-08-20

    We have developed a new, high performance, hyperspectral microscope for biological and other applications. For each voxel within a three-dimensional specimen, the microscope simultaneously records the emission spectrum from 500 nm to 800 nm, with better than 3 nm spectral resolution. The microscope features a fully confocal design to ensure high spatial resolution and high quality optical sectioning. Optical throughput and detection efficiency are maximized through the use of a custom prism spectrometer and a backside thinned electron multiplying charge coupled device (EMCCD) array. A custom readout mode and synchronization scheme enable 512-point spectra to be recorded at a rate of 8300 spectra per second. In addition, the EMCCD readout mode eliminates curvature and keystone artifacts that often plague spectral imaging systems. The architecture of the new microscope is described in detail, and hyperspectral images from several specimens are presented.

  5. Feedback under the microscope: thermodynamic structure and AGN driven shocks in M87

    CERN Document Server

    Million, E T; Simionescu, A; Allen, S W; Nulsen, P E J; Fabian, A C; Bohringer, H; Sanders, J S

    2010-01-01

    (abridged) Using a deep Chandra exposure (574 ks), we present high-resolution thermodynamic maps created from the spectra of $\\sim$16,000 independent regions, each with $\\sim$1,000 net counts. The excellent spatial resolution of the thermodynamic maps reveals the dramatic and complex temperature, pressure, entropy and metallicity structure of the system. Excluding the 'X-ray arms', the diffuse cluster gas at a given radius is strikingly isothermal. This suggests either that the ambient cluster gas, beyond the arms, remains relatively undisturbed by AGN uplift, or that conduction in the intracluster medium (ICM) is efficient along azimuthal directions. We confirm the presence of a thick ($\\sim$40 arcsec or $\\sim$3 kpc) ring of high pressure gas at a radius of $\\sim$180 arcsec ($\\sim$14 kpc) from the central AGN. We verify that this feature is associated with a classical shock front, with an average Mach number M = 1.25. Another, younger shock-like feature is observed at a radius of $\\sim$40 arcsec ($\\sim$3 kpc...

  6. Microscopic structure and dynamics of LiBF4 solutions in cyclic and linear carbonates.

    Science.gov (United States)

    Postupna, O O; Kolesnik, Y V; Kalugin, O N; Prezhdo, O V

    2011-12-15

    Motivated by development of lithium-ion batteries, we study the structure and dynamics of LiBF(4) in pure and mixed solvents with various salt concentrations. For this purpose, we have developed force field models for ethylene carbonate, propylene carbonate, dimethyl carbonate, and dimethoxyethane. We find that Li(+) is preferentially solvated by the cyclic and more polar component of the mixtures, as the electrostatic interaction overcomes possible steric hindrances. The cation coordination number decreases from 6 to 5 with increasing salt concentration due to formation of ion-pairs. The uniform decline of the diffusion coefficients of the two ions is disrupted at mixture compositions that perturb the ion-pair interaction. We show that the Stokes' model of diffusion can be applied to the very small Li(+) ion, provided that the size of the first solvation shell is properly taken into consideration. The strong coordination of the ions by the polar, cyclic components of the solvent mixtures established in our simulations suggests that the less polar linear component can be optimized in order to reduce electrolyte viscosity and to achieve high electrical conductivity.

  7. Microscopic structure and reorientation kinetics of B-H complexes in silicon

    Science.gov (United States)

    Noya, José C.; Herrero, Carlos P.; Ramírez, Rafael

    1997-12-01

    Structural and dynamical properties of hydrogen and deuterium in boron-doped silicon have been studied by the path-integral Monte Carlo method as a function of temperature in the range between 30 and 400 K. The Si-Si and Si-B interactions were modeled by Stillinger-Weber-type potentials, and the Si-H and B-H interactions were parametrized by following the results of earlier pseudopotential-density-functional calculations for this system. Impurity energy, nuclei delocalization, and lattice relaxation are analyzed, the latter resulting to be mass dependent. The reorientation rate of the complex is obtained from quantum transition-state theory. A break in the slope of the Arrhenius plot for the jump rate of hydrogen is obtained at T~60 K, indicating a crossover from thermally activated quasiclassical motion over a barrier to thermally assisted quantum tunneling, in good agreement with previous experimental results. For deuterium, this deviation from an Arrhenius law is found at T~35 K. Both the impurity and the host nuclei are treated quantum mechanically, and it is shown that the defect complex undergoing quantum tunneling consists of hydrogen, boron, and the nearest silicon atoms.

  8. Quaternary and secondary structural imaging of a human hair by a VSFG-detected IR super-resolution microscope

    Energy Technology Data Exchange (ETDEWEB)

    Sakai, Makoto, E-mail: makotos@res.titech.ac.jp [Chemical Resources Laboratory, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503 (Japan); Kikuchi, Katsuya [Chemical Resources Laboratory, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503 (Japan); Fujii, Masaaki, E-mail: mfujii@res.titech.ac.jp [Chemical Resources Laboratory, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503 (Japan)

    2013-06-20

    Highlights: ► IR super-resolution image of cross section of a human black hair were measured. ► For the amide III band, human hair gave strong VSFG signals at the cortex area. ► Distribution of α-helix based quaternary structure of keratin proteins was observed. ► The VSFG signal disappeared completely when the amide I band was monitored. ► The α-helix of keratin proteins is well aligned along the axial direction in hair. - Abstract: IR super-resolution images of cross sections of a human black hair were measured by using a home-made vibrational sum-frequency generation (VSFG) detected IR microscope in the 6–9 μm region with a sub-micrometer spatial resolution. For the amide III band, the sample gave clear strong signals at the cortex area. This enabled us to measure the distribution of intermediate filaments, which have an α-helix based quaternary structure of keratin proteins in the hair. On the other hand, the VSFG signal disappeared completely when the amide I band was monitored by the same polarization of incident light. From the polarization dependence of VSFG, it is concluded that the α-helix of keratin proteins are well aligned along the axial direction in human hair.

  9. Microscopic Effects of Shock Metamorphism in Crystalline Rocks Correlated With Shock Induced Changes in Density, Haughton Impact Structure

    Science.gov (United States)

    Singleton, A. C.; Osinski, G.; Moser, D.

    2009-05-01

    Asteroid and comet impacts are an important geological process on all solid planetary bodies, including Earth, and involve pressures and temperatures that may reach several hundred GPa and several thousand K [1] over very limited spatial and temporal scales. This results in shock metamorphism and alters the target material on both megascopic and microscopic scales [2]. Many shock metamorphic features are unique to hypervelocity impact environments and are, therefore, diagnostic of such an event [1,2]. Of particular interest for this study is the effect of hypervelocity impact on the density of the target material. In the case of crystalline target rocks, shock metamorphism results in an increase of pore space and impact induced fractures which act to decrease the density. The Haughton impact structure is a well-preserved late Eocene (39 ± 2 Ma) complex impact structure, situated near the western end of Devon Island (75°22'N, 89°41'W) [3]. The geology of the area consists of a sedimentary sequence unconformably overlying crystalline Precambrian gneisses of the Canadian Shield. Since the impact, Devon Island has remained tectonically stable and Haughton remains well-preserved despite being subjected to several glaciations. The excellent preservation of the structure is largely due to the primarily cold and relatively dry environment that has existed in the Arctic since the Eocene [3]. Samples of crystalline material were collected from 36 sites within the impact breccia unit of the Haughton impact structure. These samples display a wide range of density and physical appearance. The type of shock effect(s) created depends upon the pressures and temperatures involved as well as the composition, density and material's location in the target. The samples found in the Haughton impact structure show a wide range of shock effects and thus were exposed to a variety of different conditions likely due to their in-situ positions relative to the impact. Polished thin sections

  10. Microscopic colitis

    DEFF Research Database (Denmark)

    Münch, A; Aust, D; Bohr, Jakob

    2012-01-01

    Microscopic colitis (MC) is an inflammatory bowel disease presenting with chronic, non-bloody watery diarrhoea and few or no endoscopic abnormalities. The histological examination reveals mainly two subtypes of MC, lymphocytic or collagenous colitis. Despite the fact that the incidence in MC has...... been rising over the last decades, research has been sparse and our knowledge about MC remains limited. Specialists in the field have initiated the European Microscopic Colitis Group (EMCG) with the primary goal to create awareness on MC. The EMCG is furthermore a forum with the intention to promote...

  11. Local structures in ionic liquids probed and characterized by microscopic thermal diffusion monitored with picosecond time-resolved Raman spectroscopy.

    Science.gov (United States)

    Yoshida, Kyousuke; Iwata, Koichi; Nishiyama, Yoshio; Kimura, Yoshifumi; Hamaguchi, Hiro-o

    2012-03-14

    Vibrational cooling rate of the first excited singlet (S(1)) state of trans-stilbene and bulk thermal diffusivity are measured for seven room temperature ionic liquids, C(2)mimTf(2)N, C(4)mimTf(2)N, C(4)mimPF(6), C(5)mimTf(2)N, C(6)mimTf(2)N, C(8)mimTf(2)N, and bmpyTf(2)N. Vibrational cooling rate measured with picosecond time-resolved Raman spectroscopy reflects solute-solvent and solvent-solvent energy transfer in a microscopic solvent environment. Thermal diffusivity measured with the transient grating method indicates macroscopic heat conduction capability. Vibrational cooling rate of S(1) trans-stilbene is known to have a good correlation with bulk thermal diffusivity in ordinary molecular liquids. In the seven ionic liquids studied, however, vibrational cooling rate shows no correlation with thermal diffusivity; the observed rates are similar (0.082 to 0.12 ps(-1) in the seven ionic liquids and 0.08 to 0.14 ps(-1) in molecular liquids) despite large differences in thermal diffusivity (5.4-7.5 × 10(-8) m(2) s(-1) in ionic liquids and 8.0-10 × 10(-8) m(2) s(-1) in molecular liquids). This finding is consistent with our working hypothesis that there are local structures characteristically formed in ionic liquids. Vibrational cooling rate is determined by energy transfer among solvent ions in a local structure, while macroscopic thermal diffusion is controlled by heat transfer over boundaries of local structures. By using "local" thermal diffusivity, we are able to simulate the vibrational cooling kinetics observed in ionic liquids with a model assuming thermal diffusion in continuous media. The lower limit of the size of local structure is estimated with vibrational cooling process observed with and without the excess energy. A quantitative discussion with a numerical simulation shows that the diameter of local structure is larger than 10 nm. If we combine this lower limit, 10 nm, with the upper limit, 100 nm, which is estimated from the transparency (no light

  12. Critical behavior and microscopic structure of charged AdS black holes via an alternative phase space

    Directory of Open Access Journals (Sweden)

    Amin Dehyadegari

    2017-05-01

    Full Text Available It has been argued that charged Anti-de Sitter (AdS black holes have similar thermodynamic behavior as the Van der Waals fluid system, provided one treats the cosmological constant as a thermodynamic variable (pressure in an extended phase space. In this paper, we disclose the deep connection between charged AdS black holes and Van der Waals fluid system from an alternative point of view. We consider the mass of an AdS black hole as a function of square of the charge Q2 instead of the standard Q, i.e. M=M(S,Q2,P. We first justify such a change of view mathematically and then ask if a phase transition can occur as a function of Q2 for fixed P. Therefore, we write the equation of state as Q2=Q2(T,Ψ where Ψ (conjugate of Q2 is the inverse of the specific volume, Ψ=1/v. This allows us to complete the analogy of charged AdS black holes with Van der Waals fluid system and derive the phase transition as well as critical exponents of the system. We identify a thermodynamic instability in this new picture with real analogy to Van der Waals fluid with physically relevant Maxwell construction. We therefore study the critical behavior of isotherms in Q2–Ψ diagram and deduce all the critical exponents of the system and determine that the system exhibits a small–large black hole phase transition at the critical point (Tc,Qc2,Ψc. This alternative view is important as one can imagine such a change for a given single black hole i.e. acquiring charge which induces the phase transition. Finally, we disclose the microscopic properties of charged AdS black holes by using thermodynamic geometry. Interestingly, we find that scalar curvature has a gap between small and large black holes, and this gap becomes exceedingly large as one moves away from the critical point along the transition line. Therefore, we are able to attribute the sudden enlargement of the black hole to the strong repulsive nature of the internal constituents at the phase transition.

  13. Structural Alterations of the Glomerular Wall And Vessels in Early Stages of Diabetes Mellitus: Light and Transmission Electron Microscopic Study

    Directory of Open Access Journals (Sweden)

    Dkhil MA

    2007-01-01

    Full Text Available Objective: The capillary changes at the initial stage of diabetes may show an angioarchitecture clearly different from those of later stages and,/or very severe glomerular change. However, the onset of alterations in the early phases is unclear. This study attempts to determine the functional and structural alterations of the glomerular wall and vesicles in the early stage of diabetes.Material and Methods: Twenty-five adult rats were used in this study. They were divided into two groups: the first group of five was used as a control .The second group of 20 (the experimental group was injected intraperitoneally by a single dose of streptozotocin to induce hyperglycemia. Rats were sacrificed after ten days, two months, and four months.Five rats at two months of age with hyperglycemia were treated with insulin for eight weeks. Renal tissues were prepared by routine technique for light and transmission electron microscopic evaluation. Results: By light microscopy after ten days of induced hyperglycemia, there were no structural modifications detected either in renal glomerular fine vessels or in the glomerular basement membrane of the glomerular capillaries. After two months, there was a moderate glomerular enlargement and dilatation of glomerular capillaries, afferent, and efferent arterioles. After four months, glomerular basement membrane thickening was the only structural alteration observed. Recovery of the glomerular alterations was observed after two months of treatment with insulin. Conclusion: In early stages of diabetes mellitus in rats, there was an increase in the diameter of glomerular vessels. In later stages of the disease, the reverse was seen, but insulin treatment had a positive role in reversing these changes in the study subjects.

  14. Automatic Generation of Structural Building Descriptions from 3D Point Cloud Scans

    DEFF Research Database (Denmark)

    Ochmann, Sebastian; Vock, Richard; Wessel, Raoul

    2013-01-01

    scans to derive high-level architectural entities like rooms and doors. Starting with a registered 3D point cloud, we probabilistically model the affiliation of each measured point to a certain room in the building. We solve the resulting clustering problem using an iterative algorithm that relies......We present a new method for automatic semantic structuring of 3D point clouds representing buildings. In contrast to existing approaches which either target the outside appearance like the facade structure or rather low-level geometric structures, we focus on the building’s interior using indoor...

  15. Microscopic Structure of Mouth Parts Sensillae in the Fifth Instar Larvae of Eri Silkworm, Philosamia ricini (Lepidoptera: Saturniidae

    Directory of Open Access Journals (Sweden)

    M. V. Chamat

    2013-06-01

    Full Text Available Scanning electron microscopic studies revealed the presence of various types of sensillae on the mouth parts of Vthinstar larva of Philosamia ricini. The mouth parts of P. ricini belong to chewing types and composed of labrum, mandible, labium and maxilla. The three pair of long and short trichoid sensilla present on dorsal side around the groove of labrum. Dorso lateral margine of labrum consist of two pairs of sensilla trichoidea I and II (ST-I, II. On lateral side of mandible, ST-I and sensilla chaetica (SCH are scattered while, some campaniform sensilla (CS are present on the base of teeth. The sensilla trichoidea with or without basal ring present on maxillary palp in association with sensilla basiconica. The tip of palp contain sensilla styloconica while, short microtrichia, sensilla baiconica and sensilla styloconica observed on the stipes. Labial palp are tough and stout containing large and short trichoid sensilla. Various minute slite-like structures arranged in V shaped pattern, partially separated basal ring from bulbus base ST-I of labial palp. On the ventral side of mentum two layer of microtrichia MT-I and MT-II are overlapped each other. In the Vth instar larvae of P. ricini, spinneret bulges out from prementum and bears a pair of horns on the tip.

  16. Microscopic colitis.

    Science.gov (United States)

    Ianiro, Gianluca; Cammarota, Giovanni; Valerio, Luca; Annicchiarico, Brigida Eleonora; Milani, Alessandro; Siciliano, Massimo; Gasbarrini, Antonio

    2012-11-21

    Microscopic colitis may be defined as a clinical syndrome, of unknown etiology, consisting of chronic watery diarrhea, with no alterations in the large bowel at the endoscopic and radiologic evaluation. Therefore, a definitive diagnosis is only possible by histological analysis. The epidemiological impact of this disease has become increasingly clear in the last years, with most data coming from Western countries. Microscopic colitis includes two histological subtypes [collagenous colitis (CC) and lymphocytic colitis (LC)] with no differences in clinical presentation and management. Collagenous colitis is characterized by a thickening of the subepithelial collagen layer that is absent in LC. The main feature of LC is an increase of the density of intra-epithelial lymphocytes in the surface epithelium. A number of pathogenetic theories have been proposed over the years, involving the role of luminal agents, autoimmunity, eosinophils, genetics (human leukocyte antigen), biliary acids, infections, alterations of pericryptal fibroblasts, and drug intake; drugs like ticlopidine, carbamazepine or ranitidine are especially associated with the development of LC, while CC is more frequently linked to cimetidine, non-steroidal antiinflammatory drugs and lansoprazole. Microscopic colitis typically presents as chronic or intermittent watery diarrhea, that may be accompanied by symptoms such as abdominal pain, weight loss and incontinence. Recent evidence has added new pharmacological options for the treatment of microscopic colitis: the role of steroidal therapy, especially oral budesonide, has gained relevance, as well as immunosuppressive agents such as azathioprine and 6-mercaptopurine. The use of anti-tumor necrosis factor-α agents, infliximab and adalimumab, constitutes a new, interesting tool for the treatment of microscopic colitis, but larger, adequately designed studies are needed to confirm existing data.

  17. Microscopic colitis

    Institute of Scientific and Technical Information of China (English)

    Gianluca Ianiro; Giovanni Cammarota; Luca Valerio; Brigida Eleonora Annicchiarico; Alessandro Milani; Massimo Siciliano; Antonio Gasbarrini

    2012-01-01

    Microscopic colitis may be defined as a clinical syndrome,of unknown etiology,consisting of chronic watery diarrhea,with no alterations in the large bowel at the endoscopic and radiologic evaluation.Therefore,a definitive diagnosis is only possible by histological analysis.The epidemiological impact of this disease has become increasingly clear in the last years,with most data coming from Western countries.Microscopic colitis includes two histological subtypes [collagenous colitis (CC) and lymphocytic colitis (LC)] with no differences in clinical presentation and management.Collagenous colitis is characterized by a thickening of the subepithelial collagen layer that is absent in LC.The main feature of LC is an increase of the density of intra-epitll lial lymphocytes in the surface epithelium.A number of pathogenetic theories have been proposed over the years,involving the role of luminal agents,autoimmunity,eosinophils,genetics (human leukocyte antigen),biliary acids,infections,alterations of pericryptal fibroblasts,and drug intake; drugs like ticlopidine,carbamazepine or ranitidine are especially associated with the development of LC,while CC is more frequently linked to cimetidine,non-steroidal antiinflammatory drugs and lansoprazole.Microscopic colitis typically presents as chronic or intermittent watery diarrhea,that may be accompanied by symptoms such as abdominal pain,weight loss and incontinence.Recent evidence has added new pharmacological options for the treatment of microscopic colitis:the role of steroidal therapy,especially oral budesonide,has gained relevance,as well as immunosuppressive agents such as azathioprine and 6-mercaptopurine.The use of anti-tumor necrosis factor-α agents,infliximab and adalimumab,constitutes a new,interesting tool for the treatment of microscopic colitis,but larger,adequately designed studies are needed to confirm existing data.

  18. Diagnostic Performance of Endoscopic and Microscopic Procedures for Identifying Different Middle Ear Structures and Remaining Disease in Patients with Chronic Otitis Media: A Prospective Cohort Study.

    Directory of Open Access Journals (Sweden)

    Farhad Farahani

    Full Text Available The diagnostic performance of endoscopic and microscopic procedures for detecting diseases of the middle ear in patients with chronic otitis media (COM has rarely been investigated. This study was conducted to compare the performance of these procedures for identifying middle ear structures and their associated diseases in COM patients.In this prospective cohort study, 58 patients with chronic COM, who were candidates for tympanoplasty with or without a mastoidectomy, were enrolled. Before the surgical intervention, the middle ear was examined via an operating microscope and then through an endoscope to identify the middle ear structures as well as diseases associated with the middle ear.The patients were 15 years of age or older. The anatomical parts of the middle ear - the epitympanic, posterior mesotympanic, and hypotympanic structures - were more visible through an endoscope than through a microscope. In addition, the various segments of the mesotympanum, oval window, round window, and Eustachian tube were more visible via endoscopy. The post-operative endoscopic reevaluation of the middle ear revealed that a cholesteatoma had remained in four of 13 patients after surgery.According to the results of this study, in cases in which there is poor visibility with the operating microscope or the surgeon suspects remaining disease within the middle ear, endoscopy could be utilized to improve the evaluation of more hidden middle ear pits and structures, particularly if there is a potentially recrudescent pathology.

  19. Electronic structure and microscopic charge-transport properties of a new-type diketopyrrolopyrrole-based material.

    Science.gov (United States)

    Huang, Jin-Dou; Li, Wen-Liang; Wen, Shu-Hao; Dong, Bin

    2015-04-15

    Recently, diketopyrrolopyrrole (DPP)-based materials have attracted much interest due to their promising performance as a subunit in organic field effect transistors. Using density functional theory and charge-transport models, we investigated the electronic structure and microscopic charge transport properties of the cyanated bithiophene-functionalized DPP molecule (compound 1). First, we analyzed in detail the partition of the total relaxation (polaron) energy into the contributions from each vibrational mode and the influence of bond-parameter variations on the local electron-vibration coupling of compound 1, which well explains the effects of different functional groups on internal reorganization energy (λ). Then, we investigated the structural and electronic properties of compound 1 in its isolated molecular state and in the solid state form, and further simulated the angular resolution anisotropic mobility for both electron- and hole-transport using two different simulation methods: (i) the mobility orientation function proposed in our previous studies (method 1); and (ii) the master equation approach (method 2). The calculated electron-transfer mobility (0.00003-0.784 cm(2) V(-1) s(-1) from method 1 and 0.02-2.26 cm(2) V(-1) s(-1) from method 2) matched reasonably with the experimentally reported value (0.07-0.55 cm(2) V(-1) s(-1) ). To the best of our knowledge, this is the first time that the transport parameters of compound 1 were calculated in the context of band model and hopping models, and both calculation results suggest that the intrinsic hole mobility is higher than the corresponding intrinsic electron mobility. Our calculation results here will be instructive to further explore the potential of other higher DPP-containing quinoidal small molecules.

  20. Generating Free-Form Grid Truss Structures from 3D Scanned Point Clouds

    Directory of Open Access Journals (Sweden)

    Hui Ding

    2017-01-01

    Full Text Available Reconstruction, according to physical shape, is a novel way to generate free-form grid truss structures. 3D scanning is an effective means of acquiring physical form information and it generates dense point clouds on surfaces of objects. However, generating grid truss structures from point clouds is still a challenge. Based on the advancing front technique (AFT which is widely used in Finite Element Method (FEM, a scheme for generating grid truss structures from 3D scanned point clouds is proposed in this paper. Based on the characteristics of point cloud data, the search box is adopted to reduce the search space in grid generating. A front advancing procedure suit for point clouds is established. Delaunay method and Laplacian method are used to improve the quality of the generated grids, and an adjustment strategy that locates grid nodes at appointed places is proposed. Several examples of generating grid truss structures from 3D scanned point clouds of seashells are carried out to verify the proposed scheme. Physical models of the grid truss structures generated in the examples are manufactured by 3D print, which solidifies the feasibility of the scheme.

  1. Change Analysis in Structural Laser Scanning Point Clouds: The Baseline Method.

    Science.gov (United States)

    Shen, Yueqian; Lindenbergh, Roderik; Wang, Jinhu

    2016-12-24

    A method is introduced for detecting changes from point clouds that avoids registration. For many applications, changes are detected between two scans of the same scene obtained at different times. Traditionally, these scans are aligned to a common coordinate system having the disadvantage that this registration step introduces additional errors. In addition, registration requires stable targets or features. To avoid these issues, we propose a change detection method based on so-called baselines. Baselines connect feature points within one scan. To analyze changes, baselines connecting corresponding points in two scans are compared. As feature points either targets or virtual points corresponding to some reconstructable feature in the scene are used. The new method is implemented on two scans sampling a masonry laboratory building before and after seismic testing, that resulted in damages in the order of several centimeters. The centres of the bricks of the laboratory building are automatically extracted to serve as virtual points. Baselines connecting virtual points and/or target points are extracted and compared with respect to a suitable structural coordinate system. Changes detected from the baseline analysis are compared to a traditional cloud to cloud change analysis demonstrating the potential of the new method for structural analysis.

  2. Measuring the cardinal point of lens using a travelling microscope%用移测显微镜测量平凸透镜的基点

    Institute of Scientific and Technical Information of China (English)

    卢杰; 韩力; 曲延吉

    2014-01-01

    The radius of curvature of plano-convex lens was measured with interferometry .The refractive index of convex lens was measured with the method of apparent depth .The basic formula was used to calculate the focal length and the cardinal point .%用干涉法测量平凸透镜的曲率半径,用视深法测量其折射率,通过基本公式计算得出透镜的焦距和基点。

  3. Structures of magnetic null points in reconnection diffusion region: Cluster observations

    Institute of Scientific and Technical Information of China (English)

    HU YunHui; R.NAKAMURA; W.BAUMJOHANN; H.R'EME; C.M.CARR; DENG XiaoHua; ZHOU Meng; TANG RongXin; ZHAO Hui; FU Song; SU ZhiWen; WANG JingFang; YUAN ZhiGang

    2008-01-01

    Magnetic reconnection is a very important and fundamental plasma process in transferring energy from magnetic field into plasma. Previous theory, numerical simulations and observations mostly concen-trate on 2-dimensional (2D) model; however, magnetic reconnection is a 3-dimensional (3D) nonlinear process in nature. The properties of reconnection in 3D and its associated singular structure have not been resolved completely. Here we investigate the structures and characteristics of null points inside the reconnection diffusion region by introducing the discretized Poincaré index through Gauss integral and using magnetic field data with high resolution from the four satellites of Cluster mission. We esti-mate the velocity and trajectory of null points by calculating its position in different times, and compare and discuss the observations with different reconnection models with null points based on character-istics of electric current around null points.

  4. Robotic autopositioning of the operating microscope.

    Science.gov (United States)

    Oppenlander, Mark E; Chowdhry, Shakeel A; Merkl, Brandon; Hattendorf, Guido M; Nakaji, Peter; Spetzler, Robert F

    2014-06-01

    Use of the operating microscope has become pervasive since its introduction to the neurosurgical world. Neuronavigation fused with the operating microscope has allowed accurate correlation of the focal point of the microscope and its location on the downloaded imaging study. However, the robotic ability of the Pentero microscope has not been utilized to orient the angle of the microscope or to change its focal length to hone in on a predefined target. To report a novel technology that allows automatic positioning of the operating microscope onto a set target and utilization of a planned trajectory, either determined with the StealthStation S7 by using preoperative imaging or intraoperatively with the microscope. By utilizing the current motorized capabilities of the Zeiss OPMI Pentero microscope, a robotic autopositioning feature was developed in collaboration with Surgical Technologies, Medtronic, Inc. (StealthStation S7). The system is currently being tested at the Barrow Neurological Institute. Three options were developed for automatically positioning the microscope: AutoLock Current Point, Align Parallel to Plan, and Point to Plan Target. These options allow the microscope to pivot around the lesion, hover in a set plane parallel to the determined trajectory, or rotate and point to a set target point, respectively. Integration of automatic microscope positioning into the operative workflow has potential to increase operative efficacy and safety. This technology is best suited for precise trajectories and entry points into deep-seated lesions.

  5. Electron-microscopic analysis of ground elder (Aegopodium podagraria L.) lectin: evidence for a new type of supra-molecular protein structure.

    Science.gov (United States)

    Leurentop, L; Verbelen, J P; Peumans, W J

    1987-09-01

    The lectin of ground elder (Aegopodium podagraria L.) was investigated electron-microscopically after negative staining with uranyl salts. Affinity-purified preparations of this glycoprotein were highly heteromorphous as they contained small particles approximately 4.6 nm in diameter and very large particles of different shapes. Among the latter, circular and helicoidal structures were the most regular in appearance. The circles were 9.3 nm in diameter, whereas the helices were 9 nm or 20 nm in diameter and up to 60 nm in length. After photographic enhancement, pictures of the molecules indicated that both the larger structures and the small particles could be obtained in pure forms by gel filtration of the lectin on Sepharose 4B. Since the former were the only constituents of the excluded fraction (Mr>5000000), whereas they were totally absent in the fraction eluting with an apparent molecular weight of about 500000, these supra-molecular structures revealed by the electron microscope cannot be artefacts generated during preparation of the lectin for electron-microscopic observation.

  6. Enabling low-noise null-point scanning thermal microscopy by the optimization of scanning thermal microscope probe through a rigorous theory of quantitative measurement

    Science.gov (United States)

    Hwang, Gwangseok; Chung, Jaehun; Kwon, Ohmyoung

    2014-11-01

    The application of conventional scanning thermal microscopy (SThM) is severely limited by three major problems: (i) distortion of the measured signal due to heat transfer through the air, (ii) the unknown and variable value of the tip-sample thermal contact resistance, and (iii) perturbation of the sample temperature due to the heat flux through the tip-sample thermal contact. Recently, we proposed null-point scanning thermal microscopy (NP SThM) as a way of overcoming these problems in principle by tracking the thermal equilibrium between the end of the SThM tip and the sample surface. However, in order to obtain high spatial resolution, which is the primary motivation for SThM, NP SThM requires an extremely sensitive SThM probe that can trace the vanishingly small heat flux through the tip-sample nano-thermal contact. Herein, we derive a relation between the spatial resolution and the design parameters of a SThM probe, optimize the thermal and electrical design, and develop a batch-fabrication process. We also quantitatively demonstrate significantly improved sensitivity, lower measurement noise, and higher spatial resolution of the fabricated SThM probes. By utilizing the exceptional performance of these fabricated probes, we show that NP SThM can be used to obtain a quantitative temperature profile with nanoscale resolution independent of the changing tip-sample thermal contact resistance and without perturbation of the sample temperature or distortion due to the heat transfer through the air.

  7. Microscopic Structure of Rabbit Hair%家兔绒毛的显微结构研究

    Institute of Scientific and Technical Information of China (English)

    郭天芬; 王欣荣; 李维红; 牛春娥

    2012-01-01

    [Objective] The paper was to explore the microscopic structure of rabbit hair. [Method] Single rabbit hair with typical features was selected to observe its mi- croscopic structure from tip to root, and its fiber diameter was also measured. [Result] The rabbit hair tip was constituted by scale layer and cortical layer, without medullary layer; the middle part was generally constituted by scale layer, cortical layer and medullary layer; the root had no medullary layer, and the scale layer was wheatear-shaped. This was the property of rabbit hair, which could be used for comparative studies with other animal fiber and species identification. Rabbit hair had developed medullary layer, and fiber diameter was positively related to column number of medullary cavity. The hair generally was single column, and coarse hair was multi-column. Single rabbit hair was the finest in the tip, coarse in the middle and tapering in the root. The diameter difference of various parts was large, and the ex- ternal growth characteristics was spindle-shaped. [Conclusion] Using biological micro- scope method to identify different animal fur and product species is more objective and simple.%[目的]了解家兔绒毛的显微形态结构,[方法]选择其有典型特征的单根家兔绒毛,从尖部到根部对其进行显微结构观察,并检测其纤维直径。[结果]家兔绒毛的毛尖由鳞片层和皮质层组成,无髓质层;中部一般由鳞片层、皮质层和髓质层组成;根部无髓质层,鳞片层呈麦穗状。这是家兔绒毛的特性,可用于与其他动物纤维的比较研究及种类鉴别。兔毛具有发达的髓质层,纤维直径与髓腔列数成正相关。绒毛一般为单列,粗毛为多列。单根兔绒的尖郎最细,中部变粗,根部又变细,且各部分直径差异较大,外形生长特性呈纺锤形。[结论]利用生物显微镜法鉴别不同动物毛皮及其产品种类是较为客观、简便的。

  8. Multiple unpinned Dirac points in group-Va single-layers with phosphorene structure

    Science.gov (United States)

    Lu, Yunhao; Zhou, Di; Chang, Guoqing; Guan, Shan; Chen, Weiguang; Jiang, Yinzhu; Jiang, Jianzhong; Wang, Xue-Sen; Yang, Shengyuan A.; Feng, Yuan Ping; Kawazoe, Yoshiyuki; Lin, Hsin

    2016-06-01

    Emergent Dirac fermion states underlie many intriguing properties of graphene, and the search for them constitutes one strong motivation to explore two-dimensional (2D) allotropes of other elements. Phosphorene, the ultrathin layers of black phosphorous, has been a subject of intense investigations recently, and it was found that other group-Va elements could also form 2D layers with similar puckered lattice structure. Here, by a close examination of their electronic band structure evolution, we discover two types of Dirac fermion states emerging in the low-energy spectrum. One pair of (type-I) Dirac points is sitting on high-symmetry lines, while two pairs of (type-II) Dirac points are located at generic k-points, with different anisotropic dispersions determined by the reduced symmetries at their locations. Such fully-unpinned (type-II) 2D Dirac points are discovered for the first time. In the absence of spin-orbit coupling (SOC), we find that each Dirac node is protected by the sublattice symmetry from gap opening, which is in turn ensured by any one of three point group symmetries. The SOC generally gaps the Dirac nodes, and for the type-I case, this drives the system into a quantum spin Hall insulator phase. We suggest possible ways to realise the unpinned Dirac points in strained phosphorene.

  9. Study of structural break points in global and hemispheric temperature series by piecewise regression

    Science.gov (United States)

    Werner, Rolf; Valev, Dimitar; Danov, Dimitar; Guineva, Veneta

    2015-12-01

    The study of climate trends taking into consideration possible structural changes is important for understanding climate development characterized by a stochastic trend or by a determined one. In the paper global and hemisphere temperature anomalies are modeled by piecewise linear regression and break points in the temperature evolution are found. It was demonstrated that the used method allowed finding of breaks characterized by long time trends (low frequency processes) as well as abrupt changes (fast frequency processes). The obtained break points for slow temperature change are close to the ones found by other authors however additional conditions (as segment length, gradient and others) are not used here. The results for higher break point numbers are like the ones of step slope models. It was demonstrated that the successive phases of warming and cooling and most of the break points subdividing these periods in the Northern Hemisphere are introduced by the Atlantic multidecadal oscillation. Because the strong quasi periodicity of the Atlantic multidecadal oscillation the authors recommend the removal of its influence on the temperature from the temperature series before studies of trends or structural changes. The Northern Hemisphere temperature data after the removal of the Atlantic multidecadal oscillation influence show structures like the Southern Hemisphere temperatures. Model selection by the Schwarz-Bayesian Information Criterion developed by Liu, Wu and Zidek (LWZ criterion) shows that models with only one break point are to be preferred.

  10. Robust CPD Algorithm for Non-Rigid Point Set Registration Based on Structure Information.

    Science.gov (United States)

    Peng, Lei; Li, Guangyao; Xiao, Mang; Xie, Li

    2016-01-01

    Recently, the Coherent Point Drift (CPD) algorithm has become a very popular and efficient method for point set registration. However, this method does not take into consideration the neighborhood structure information of points to find the correspondence and requires a manual assignment of the outlier ratio. Therefore, CPD is not robust for large degrees of degradation. In this paper, an improved method is proposed to overcome the two limitations of CPD. A structure descriptor, such as shape context, is used to perform the auxiliary calculation of the correspondence, and the proportion of each GMM component is adjusted by the similarity. The outlier ratio is formulated in the EM framework so that it can be automatically calculated and optimized iteratively. The experimental results on both synthetic data and real data demonstrate that the proposed method described here is more robust to deformation, noise, occlusion, and outliers than CPD and other state-of-the-art algorithms.

  11. Determination of the structure of active region magnetic fields in the singular point problem

    Science.gov (United States)

    Kulikova, G. N.; Molodenskij, M. M.; Filippov, B. P.

    1990-02-01

    The solution to the inverse problem of active region magnetic field structure using fibril orientation is examined, focusing on the case where the field of the direction of the vector tau has singular points. In this case, the integrating factor for the field line equation in the z = 0 plane cannot be solved using the method of Kulikova et al. (1989). However, model representations of the field produce a solution which is accurate up to a factor common to the total distribution of the case. Nodes, foci, and saddle points are observed in the chromosphere. It is suggested that these singular points play an important role in constructing the large-scale structure of the magnetic field. Also, it is shown that the small-scale field is associated with surface currents. Good agreement is found between calculations and measurements of the longitudinal field on the photosphere of the active region HR 16862-16864.

  12. Development of olfactory epithelium and associated structures in the green iguana, Iguana iguana—light and scanning electron microscopic study

    OpenAIRE

    Olga Sapoznikov; Petr Cizek; Frantisek Tichy

    2016-01-01

    The ontogenesis of the nasal cavity has been described in many mammalian species. The situation is different with reptiles, despite the fact that they have become relatively common as pets. In this study we focused on the ontogenesis of the olfactory epithelium, as well as other types of epithelia in the nasal cavity of pre-hatched green iguanas (Iguana iguana). Collection of samples began from day 67 of incubation and continued every four days until hatching. Microscopic examination revealed...

  13. Subharmonic energy-gap structure and heating effects in superconducting niobium point contacts

    DEFF Research Database (Denmark)

    Flensberg, K.; Hansen, Jørn Bindslev

    1989-01-01

    We present experimental data of the temperature-dependent subharmonic energy-gap structure (SGS) in the current-voltage (I-V) curves of superconducting niobium point contacts. The observed SGS is modified by heating effects. We construct a model of the quasiparticle conductance of metallic...

  14. The Development of the High-Resolution Transmission Electron Microscope (HRTEM) Combined with AFM for Simultaneous Observation of Structure and Force of the Nanocontact

    Science.gov (United States)

    Shibata, Sakiko; Tanishiro, Yasumasa; Kondo, Yukihito; Minoda, Hiroki; Takayanagi, Kunio

    2004-03-01

    A high-resolution transmission electron microscope combined with an atomic force microscope (HRTEM-AFM) has been developed. It enables us to observe mechanical force and atomic structure of nanowires formed at the nanocontact simultaneously. And the self-sensing piezoresistive cantilever is used as an AFM probe in the HRTEM-AFM. It has high spatial resolution of 0.2nm and high force sensitivity of sub-nN. The HRTEM has also ability to work on ultra high vacuum(UHV) which is necessary to keep the nanocontact clean. The present system could never be developed without total redesigning of the goniometer stage of UHV-TEM which operates at 10-8 Pa.

  15. Particle Formation from Pulsed Laser Irradiation of SootAggregates studied with scanning mobility particle sizer, transmissionelectron microscope and near-edge x-ray absorption fine structure.

    Energy Technology Data Exchange (ETDEWEB)

    Michelsen, Hope A.; Tivanski, Alexei V.; Gilles, Mary K.; vanPoppel, Laura H.; Dansson, Mark A.; Buseck, Peter R.; Buseck, Peter R.

    2007-02-20

    We investigated the physical and chemical changes induced in soot aggregates exposed to laser radiation using a scanning mobility particle sizer, a transmission electron microscope, and a scanning transmission x-ray microscope to perform near-edge x-ray absorption fine structure spectroscopy. Laser-induced nanoparticle production was observed at fluences above 0.12 J/cm(2) at 532 nm and 0.22 J/cm(2) at 1064 nm. Our results indicate that new particle formation proceeds via (1) vaporization of small carbon clusters by thermal or photolytic mechanisms, followed by homogeneous nucleation, (2) heterogeneous nucleation of vaporized carbon clusters onto material ablated from primary particles, or (3) both processes.

  16. 'Sub-atomic' resolution of non-contact atomic force microscope images induced by a heterogeneous tip structure: a density functional theory study.

    Science.gov (United States)

    Campbellová, Anna; Ondráček, Martin; Pou, Pablo; Pérez, Rubén; Klapetek, Petr; Jelínek, Pavel

    2011-07-22

    A Si adatom on a Si(111)-(7 × 7) reconstructed surface is a typical atomic feature that can rather easily be imaged by a non-contact atomic force microscope (nc-AFM) and can be thus used to test the atomic resolution of the microscope. Based on our first principles density functional theory (DFT) calculations, we demonstrate that the structure of the termination of the AFM tip plays a decisive role in determining the appearance of the adatom image. We show how the AFM image changes depending on the tip-surface distance and the composition of the atomic apex at the end of the tip. We also demonstrate that contaminated tips may give rise to image patterns displaying so-called 'sub-atomic' features even in the attractive force regime.

  17. Characterization of process-induced damage in Cu/low-k interconnect structure by microscopic infrared spectroscopy with polarized infrared light

    Science.gov (United States)

    Seki, Hirofumi; Hashimoto, Hideki; Ozaki, Yukihiro

    2016-09-01

    Microscopic Fourier-transform infrared (FT-IR) spectra are measured for a Cu/low-k interconnect structure using polarized IR light for different widths of low-k spaces and Cu lines, and for different heights of Cu lines, on Si substrates. Although the widths of the Cu line and the low-k space are 70 nm each, considerably smaller than the wavelength of the IR light, the FT-IR spectra of the low-k film were obtained for the Cu/low-k interconnect structure. A suitable method was established for measuring the process-induced damage in a low-k film that was not detected by the TEM-EELS (Transmission Electron Microscope-Electron Energy-Loss Spectroscopy) using microscopic IR polarized light. Based on the IR results, it was presumed that the FT-IR spectra mainly reflect the structural changes in the sidewalls of the low-k films for Cu/low-k interconnect structures, and the mechanism of generating process-induced damage involves the generation of Si-OH groups in the low-k film when the Si-CH3 bonds break during the fabrication processes. The Si-OH groups attract moisture and the OH peak intensity increases. It was concluded that the increase in the OH groups in the low-k film is a sensitive indicator of low-k damage. We achieved the characterization of the process-induced damage that was not detected by the TEM-EELS and speculated that the proposed method is applicable to interconnects with line and space widths of 70 nm/70 nm and on shorter scales of leading edge devices. The location of process-induced damage and its mechanism for the Cu/low-k interconnect structure were revealed via the measurement method.

  18. Address Points, Address Points centered on structure, Published in 2013, 1:2400 (1in=200ft) scale, Portage County.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Address Points dataset, published at 1:2400 (1in=200ft) scale, was produced all or in part from Orthoimagery information as of 2013. It is described as 'Address...

  19. General point dipole theory for periodic metasurfaces: magnetoelectric scattering lattices coupled to planar photonic structures

    CERN Document Server

    Chen, Yuntian

    2015-01-01

    We study semi-analytically the light emission and absorption properties of arbitrary stratified photonic structures with embedded two-dimensional magnetoelectric point scattering lattices, as used in recent plasmon-enhanced LEDs and solar cells. By employing dyadic Green's function for the layered structure in combination with Ewald lattice summation to deal with the particle lattice, we develop an efficient method to study the coupling between planar 2D scattering lattices of plasmonic, or metamaterial point particles, coupled to layered structures. Using the `array scanning method' we deal with localized sources. Firstly, we apply our method to light emission enhancement of dipole emitters in slab waveguides, mediated by plasmonic lattices. We benchmark the array scanning method against a reciprocity-based approach to find that the calculated radiative rate enhancement in k-space below the light cone shows excellent agreement. Secondly, we apply our method to study absorption-enhancement in thin-film solar ...

  20. Thermodynamic and real-space structural evidence of a 2D critical point in phospholipid monolayers

    DEFF Research Database (Denmark)

    Nielsen, Lars K.; Bjørnholm, Thomas; Mouritsen, Ole G.

    2007-01-01

    The two-dimensional phase diagram of phospholipid monolayers at air-water interfaces has been constructed from Langmuir compression isotherms. The coexistence region between the solid and fluid phases of the monolayer ends at the critical temperature of the transition. The small-scale lateral...... structure of the monolayers has been imaged by atomic force microscopy in the nm to mu m range at distinct points in the phase diagram. The lateral structure is immobilized by transferring the monolayer from an air-water interface to a solid mica support using Langmuir-Blodgett techniques. A transfer...... a critical point. The critical behavior inferred from the thermodynamic as well as the structural data is found to be consistent with the 2D Ising universality class. Additional results are presented demonstrating the presence of striped phases and coexisting domains in binary mixtures....

  1. The microscopic structure of $\\pi NN$, $\\pi N\\Delta$ and $\\pi\\Delta\\Delta$ vertices in a hybrid constituent quark model

    CERN Document Server

    Jung, Ju-Hyun

    2016-01-01

    We present a microscopic description of the strong $\\pi NN$, $\\pi N\\Delta$ and $\\pi\\Delta\\Delta$ vertices. Our starting point is a constituent-quark model supplemented by an additional $3q\\pi$ non-valence component. In the spirit of chiral constituent-quark models, quarks are allowed to emit and reabsorb a pion. This multichannel system is treated in a relativistically invariant way within the framework of point-form quantum mechanics. Starting with a common $SU(6)$ spin-flavor-symmetric wave function for $N$ and $\\Delta$, we calculate the strength of the $\\pi NN$, $\\pi N\\Delta$ and $\\pi\\Delta\\Delta$ couplings and the corresponding vertex form factors. Our results are in accordance with phenomenological fits of these quantities that have been obtained within purely hadronic multichannel models for baryon resonances.

  2. Band warping, band non-parabolicity, and Dirac points in electronic and lattice structures

    Science.gov (United States)

    Resca, Lorenzo; Mecholsky, Nicholas A.; Pegg, Ian L.

    2017-10-01

    We illustrate at a fundamental level the physical and mathematical origins of band warping and band non-parabolicity in electronic and vibrational structures. We point out a robust presence of pairs of topologically induced Dirac points in a primitive-rectangular lattice using a p-type tight-binding approximation. We analyze two-dimensional primitive-rectangular and square Bravais lattices with implications that are expected to generalize to more complex structures. Band warping is shown to arise at the onset of a singular transition to a crystal lattice with a larger symmetry group, which allows the possibility of irreducible representations of higher dimensions, hence band degeneracy, at special symmetry points in reciprocal space. Band warping is incompatible with a multi-dimensional Taylor series expansion, whereas band non-parabolicities are associated with multi-dimensional Taylor series expansions to all orders. Still band non-parabolicities may merge into band warping at the onset of a larger symmetry group. Remarkably, while still maintaining a clear connection with that merging, band non-parabolicities may produce pairs of conical intersections at relatively low-symmetry points. Apparently, such conical intersections are robustly maintained by global topology requirements, rather than any local symmetry protection. For two p-type tight-binding bands, we find such pairs of conical intersections drifting along the edges of restricted Brillouin zones of primitive-rectangular Bravais lattices as lattice constants vary relatively to each other, until these conical intersections merge into degenerate warped bands at high-symmetry points at the onset of a square lattice. The conical intersections that we found appear to have similar topological characteristics as Dirac points extensively studied in graphene and other topological insulators, even though our conical intersections have none of the symmetry complexity and protection afforded by the latter more

  3. Two-step Structural Design of Mesh Antennas for High Beam Pointing Accuracy

    Science.gov (United States)

    Zhang, Shuxin; Du, Jingli; Wang, Wei; Zhang, Xinghua; Zong, Yali

    2017-05-01

    A well-designed reflector surface with high beam pointing accuracy in electromagnetic performance is of practical significance to the space application of cable mesh reflector antennas. As for space requirements, circular polarizations are widely used in spaceborne antennas, which usually lead to a beam shift for offset reflectors and influence the beam pointing accuracy. A two-step structural design procedure is proposed to overcome the beam squint phenomenon for high beam pointing accuracy design of circularly polarized offset cable mesh reflectors. A simple structural optimal design and an integrated structural electromagnetic optimization are combined to alleviate the beam squint effect of circular polarizations. It is implemented by cable pretension design and adjustment to shape the offset cable mesh surface. Besides, in order to increase the efficiency of integrated optimization, an update Broyden-Fletcher-Goldfarb-Shanno (BFGS) Hessian matrix is employed in the optimization iteration with sequential quadratic programming. A circularly polarized offset cable mesh reflector is utilized to show the feasibility and effectiveness of the proposed procedure. A high beam pointing accuracy in order of 0.0001º of electromagnetic performance is achieved.

  4. CREATING PRODUCT MODELS FROM POINT CLOUD OF CIVIL STRUCTURES BASED ON GEOMETRIC SIMILARITY

    Directory of Open Access Journals (Sweden)

    N. Hidaka

    2015-05-01

    Full Text Available The existing civil structures must be maintained in order to ensure their expected lifelong serviceability. Careful rehabilitation and maintenance planning plays a significant role in that effort. Recently, construction information modelling (CIM techniques, such as product models, are increasingly being used to facilitate structure maintenance. Using this methodology, laser scanning systems can provide point cloud data that are used to produce highly accurate and dense representations of civil structures. However, while numerous methods for creating a single surface exist, part decomposition is required in order to create product models consisting of more than one part. This research aims at the development of a surface reconstruction system that utilizes point cloud data efficiently in order to create complete product models. The research proposes using the application of local shape matching to the input point clouds in order to define a set of representative parts. These representative parts are then polygonized and copied to locations where the same types of parts exist. The results of our experiments show that the proposed method can efficiently create product models using input point cloud data.

  5. MULTISEASONAL TREE CROWN STRUCTURE MAPPING WITH POINT CLOUDS FROM OTS QUADROCOPTER SYSTEMS

    Directory of Open Access Journals (Sweden)

    S. Hese

    2017-08-01

    Full Text Available OTF (Off The Shelf quadro copter systems provide a cost effective (below 2000 Euro, flexible and mobile platform for high resolution point cloud mapping. Various studies showed the full potential of these small and flexible platforms. Especially in very tight and complex 3D environments the automatic obstacle avoidance, low copter weight, long flight times and precise maneuvering are important advantages of these small OTS systems in comparison with larger octocopter systems. This study examines the potential of the DJI Phantom 4 pro series and the Phantom 3A series for within-stand and forest tree crown 3D point cloud mapping using both within stand oblique imaging in different altitude levels and data captured from a nadir perspective. On a test site in Brandenburg/Germany a beach crown was selected and measured with 3 different altitude levels in Point Of Interest (POI mode with oblique data capturing and deriving one nadir mosaic created with 85/85 % overlap using Drone Deploy automatic mapping software. Three different flight campaigns were performed, one in September 2016 (leaf-on, one in March 2017 (leaf-off and one in May 2017 (leaf-on to derive point clouds from different crown structure and phenological situations – covering the leaf-on and leafoff status of the tree crown. After height correction, the point clouds where used with GPS geo referencing to calculate voxel based densities on 50 × 10 × 10 cm voxel definitions using a topological network of chessboard image objects in 0,5 m height steps in an object based image processing environment. Comparison between leaf-off and leaf-on status was done on volume pixel definitions comparing the attributed point densities per volume and plotting the resulting values as a function of distance to the crown center. In the leaf-off status SFM (structure from motion algorithms clearly identified the central stem and also secondary branch systems. While the penetration into the

  6. A formalism for scattering of complex composite structures. II. Distributed reference points

    DEFF Research Database (Denmark)

    Svaneborg, Carsten; Pedersen, Jan Skov

    2012-01-01

    Recently we developed a formalism for the scattering from linear and acyclic branched structures build of mutually non-interacting sub-units.[C. Svaneborg and J. S. Pedersen, J. Chem. Phys. 136, 104105 (2012)] We assumed each sub-unit has reference points associated with it. These are well defined...... positions where sub-units can be linked together. In the present paper, we generalize the formalism to the case where each reference point can represent a distribution of potential link positions. We also present a generalized diagrammatic representation of the formalism. Scattering expressions required...

  7. Point and line geologic structure information in "Structure, outcrop, and subcrop of the geologic structure information for the Arapahoe and Laramie-Fox Hills aquifers.

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This digital geospatial data set consists of points and lines representing symbolization of geologic structure information for the Arapahoe and Laramie-Fox Hills...

  8. An ArcGIS approach to include tectonic structures in point data regionalization.

    Science.gov (United States)

    Darsow, Andreas; Schafmeister, Maria-Theresia; Hofmann, Thilo

    2009-01-01

    Point data derived from drilling logs must often be regionalized. However, aquifers may show discontinuous surface structures, such as the offset of an aquitard caused by tectonic faults. One main challenge has been to incorporate these structures into the regionalization process of point data. We combined ordinary kriging and inverse distance weighted (IDW) interpolation to account for neotectonic structures in the regionalization process. The study area chosen to test this approach is the largest porous aquifer in Austria. It consists of three basins formed by neotectonic events and delimited by steep faults with a vertical offset of the aquitard up to 70 m within very short distances. First, ordinary kriging was used to incorporate the characteristic spatial variability of the aquitard location by means of a variogram. The tectonic faults could be included into the regionalization process by using breaklines with buffer zones. All data points inside the buffer were deleted. Last, IDW was performed, resulting in an aquitard map representing the discontinuous surface structures. This approach enables one to account for such surfaces using the standard software package ArcGIS; therefore, it could be adopted in many practical applications.

  9. Realization of a novel Ag/SnO2 electrical contact material with microscopic fiber-like structure

    Institute of Scientific and Technical Information of China (English)

    Chen Lawson; Liu Weili; Tian Hui

    2013-01-01

    According to the principle that fiber-like arrangement of reinforcing particles SnO2 paralleling to the direction of current is propitious to the electrical and mechanical performance of the electrical contact materials,we proposed and reported a novel precursor route used to prepare Ag/SnO2 electrical contact material with fiberlike arrangement of reinforcing nanoparticles.The mechanism for the formation of fiber-like arrangement of reinforcing nanoparticles in Ag/SnO2 electrical contact material was also discussed.The as-prepared samples were characterized by means of scanning electron microscope (SEM),optical microscope (OM),energy-dispersive X-ray spectroscopy (EDX),MHV2000 microhardness test,and double bridge tester.The analysis showed that the as-prepared Ag/SnO2 electrical contact material with fiber-like arrangement of reinforcing nanoparticles exhibits a high elongation of 24 %,a particularly low electrical resistivity of 2.08 μ-Ω.cm,and low arcing energy,and thus has considerable technical,economical and environmental benefits.

  10. A Quantitative Structure Property Relationship for Prediction of Flash Point of Alkanes Using Molecular Connectivity Indices

    Institute of Scientific and Technical Information of China (English)

    Morteza Atabati; Reza Emamalizadeh

    2013-01-01

    Many structure-property/activity studies use graph theoretical indices,which are based on the topological properties of a molecule viewed as a graph.Since topological indices can be derived directly from the molecular structure without any experimental effort,they provide a simple and straightforward method for property prediction.In this work the flash point of alkanes was modeled by a set of molecular connectivity indices (x),modified molecular connectivity indices (mx(1)h) and valance molecular connectivity indices (mxv),with mxv calculated using the hydrogen perturbation.A stepwise Multiple Linear Regression (MLR) method was used to select the best indices.The predicted flash points are in good agreement with the experimental data,with the average absolute deviation 4.3 K.

  11. A formalism for scattering of complex composite structures. II. Distributed reference points.

    Science.gov (United States)

    Svaneborg, Carsten; Pedersen, Jan Skov

    2012-04-21

    Recently, we developed a formalism for the scattering from linear and acyclic branched structures build of mutually non-interacting sub-units. [C. Svaneborg and J. S. Pedersen, J. Chem. Phys. 136, 104105 (2012)] We assumed each sub-unit has reference points associated with it. These are well-defined positions where sub-units can be linked together. In the present paper, we generalize the formalism to the case where each reference point can represent a distribution of potential link positions. We also present a generalized diagrammatic representation of the formalism. Scattering expressions required to model rods, polymers, loops, flat circular disks, rigid spheres, and cylinders are derived, and we use them to illustrate the formalism by deriving the generic scattering expression for micelles and bottle-brush structures and show how the scattering is affected by different choices of potential link positions and sub-unit choices.

  12. Structure of the correlation function at the accumulation points of the logistic map

    Science.gov (United States)

    Karamanos, K.; Mistakidis, I. S.; Mistakidis, S. I.

    2017-03-01

    The correlation function of the trajectory exactly at the Feigenbaum point of the logistic map is investigated and checked by numerical experiments. Taking advantage of recent closed analytical results on the symbol-to-symbol correlation function of the generating partition, we are in position to justify the deep algorithmic structure of the correlation function apart from numerical constants. A generalization is given for arbitrary $m\\cdot 2^{\\infty}$ Feigenbaum attractors.

  13. Structural Vector Description and Estimation of Normal Boiling Points for 66 Aromatic Hydrocarbons

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    A molecular vector-type descriptor containing 6 variables is used to describe the structure of aromatic hydrocarbons (AHs) and relate to normal boiling points (bp) of AHs. The correlation coefficient (R) between the estimated bp and experimental bp is 0.9988 and the root mean square error (RMS) is 7.907° C for 66 AHs. The RMS obtained by cross-validation is 9.131° C, which implies the relationship model having good prediction ability.

  14. Analysis of tree stand horizontal structure using random point field methods

    Directory of Open Access Journals (Sweden)

    O. P. Sekretenko

    2015-06-01

    Full Text Available This paper uses the model approach to analyze the horizontal structure of forest stands. The main types of models of random point fields and statistical procedures that can be used to analyze spatial patterns of trees of uneven and even-aged stands are described. We show how modern methods of spatial statistics can be used to address one of the objectives of forestry – to clarify the laws of natural thinning of forest stand and the corresponding changes in its spatial structure over time. Studying natural forest thinning, we describe the consecutive stages of modeling: selection of the appropriate parametric model, parameter estimation and generation of point patterns in accordance with the selected model, the selection of statistical functions to describe the horizontal structure of forest stands and testing of statistical hypotheses. We show the possibilities of a specialized software package, spatstat, which is designed to meet the challenges of spatial statistics and provides software support for modern methods of analysis of spatial data. We show that a model of stand thinning that does not consider inter-tree interaction can project the size distribution of the trees properly, but the spatial pattern of the modeled stand is not quite consistent with observed data. Using data of three even-aged pine forest stands of 25, 55, and 90-years old, we demonstrate that the spatial point process models are useful for combining measurements in the forest stands of different ages to study the forest stand natural thinning.

  15. Microscopic annealing process and its impact on superconductivity in T'-structure electron-doped copper oxides.

    Science.gov (United States)

    Kang, Hye Jung; Dai, Pengcheng; Campbell, Branton J; Chupas, Peter J; Rosenkranz, Stephan; Lee, Peter L; Huang, Qingzhen; Li, Shiliang; Komiya, Seiki; Ando, Yoichi

    2007-03-01

    High-transition-temperature superconductivity arises in copper oxides when holes or electrons are doped into the CuO(2) planes of their insulating parent compounds. Whereas hole doping quickly induces metallic behaviour and superconductivity in many cuprates, electron doping alone is insufficient in materials such as R(2)CuO(4) (R is Nd, Pr, La, Ce and so on), where it is necessary to anneal an as-grown sample in a low-oxygen environment to remove a tiny amount of oxygen in order to induce superconductivity. Here we show that the microscopic process of oxygen reduction repairs Cu deficiencies in the as-grown materials and creates oxygen vacancies in the stoichiometric CuO(2) planes, effectively reducing disorder and providing itinerant carriers for superconductivity. The resolution of this long-standing materials issue suggests that the fundamental mechanism for superconductivity is the same for electron- and hole-doped copper oxides.

  16. Development of olfactory epithelium and associated structures in the green iguana, Iguana iguana—light and scanning electron microscopic study

    Directory of Open Access Journals (Sweden)

    Olga Sapoznikov

    2016-12-01

    Full Text Available The ontogenesis of the nasal cavity has been described in many mammalian species. The situation is different with reptiles, despite the fact that they have become relatively common as pets. In this study we focused on the ontogenesis of the olfactory epithelium, as well as other types of epithelia in the nasal cavity of pre-hatched green iguanas (Iguana iguana. Collection of samples began from day 67 of incubation and continued every four days until hatching. Microscopic examination revealed that significant morphological changes in the nasal cavity began approximately at day 91 of ontogenesis. Approximately at this same stage, the nasal cavity epithelium began to differentiate. The cavity was divided into two compartments by a cartilaginous disc. The ventral compartment bulged rostrally and eventually opened up into the external environment. Three clearly demarcated areas of epithelium in the nasal cavity were visible at day 107.

  17. Imaging of intracellular spherical lamellar structures and tissue gross morphology by a focused ion beam/scanning electron microscope (FIB/SEM)

    Energy Technology Data Exchange (ETDEWEB)

    Drobne, Damjana [Department of Biology, University of Ljubljana, Vecna pot 111, SI-1000 Ljubljana (Slovenia)], E-mail: damjana.drobne@bf.uni-lj.si; Milani, Marziale [Materials Science Department, University of Milano-Bicocca, Via Cozzi 53, I-20125 Milano (Italy); Leser, Vladka [Department of Biology, University of Ljubljana, Vecna pot 111, SI-1000 Ljubljana (Slovenia); Tatti, Francesco [FEI Italia, Via Cervi 40, I-00139 Roma (Italy); Zrimec, Alexis [Institute of Physical Biology, Velika Loka 90, SI-1290 Grosuplje (Slovenia); Znidarsic, Nada; Kostanjsek, Rok; Strus, Jasna [Department of Biology, University of Ljubljana, Vecna pot 111, SI-1000 Ljubljana (Slovenia)

    2008-06-15

    We report the use of a focused ion beam/scanning electron microscope (FIB/SEM) for simultaneous investigation of digestive gland epithelium gross morphology and ultrastructure of multilamellar intracellular structures. Digestive glands of a terrestrial isopod (Porcellio scaber, Isopoda, Crustacea) were examined by FIB/SEM and by transmission electron microscopy (TEM). The results obtained by FIB/SEM and by TEM are comparable and complementary. The FIB/SEM shows the same ultrastructural complexity of multilamellar intracellular structures as indicated by TEM. The term lamellar bodies was used for the multillamellar structures in the digestive glands of P. scaber due to their structural similarity to the lamellar bodies found in vertebrate lungs. Lamellar bodies in digestive glands of different animals vary in their abundance, and number as well as the thickness of concentric lamellae per lamellar body. FIB/SEM revealed a connection between digestive gland gross morphological features and the structure of lamellar bodies. Serial slicing and imaging of cells enables easy identification of the contact between a lamellar body and a lipid droplet. There are frequent reports of multilamellar intracellular structures in different vertebrate as well as invertebrate cells, but laminated cellular structures are still poorly known. The FIB/SEM can significantly contribute to the structural knowledge and is always recommended when a link between gross morphology and ultrastrucutre is investigated, especially when cells or cellular inclusions have a dynamic nature due to normal, stressed or pathological conditions.

  18. Complete N-point superstring disk amplitude II. Amplitude and hypergeometric function structure

    Energy Technology Data Exchange (ETDEWEB)

    Mafra, Carlos R., E-mail: crmafra@aei.mpg.de [Max-Planck-Institut für Gravitationsphysik, Albert-Einstein-Institut, 14476 Potsdam (Germany); Kavli Institute for Theoretical Physics, University of California, Santa Barbara, CA 93106 (United States); Schlotterer, Oliver, E-mail: olivers@mppmu.mpg.de [Kavli Institute for Theoretical Physics, University of California, Santa Barbara, CA 93106 (United States); Max-Planck-Institut für Physik, Werner-Heisenberg-Institut, 80805 München (Germany); Stieberger, Stephan, E-mail: stephan.stieberger@mpp.mpg.de [Kavli Institute for Theoretical Physics, University of California, Santa Barbara, CA 93106 (United States); Max-Planck-Institut für Physik, Werner-Heisenberg-Institut, 80805 München (Germany)

    2013-08-21

    Using the pure spinor formalism in part I (Mafra et al., preprint [1]) we compute the complete tree-level amplitude of N massless open strings and find a striking simple and compact form in terms of minimal building blocks: the full N-point amplitude is expressed by a sum over (N−3)! Yang–Mills partial subamplitudes each multiplying a multiple Gaussian hypergeometric function. While the former capture the space–time kinematics of the amplitude the latter encode the string effects. This result disguises a lot of structure linking aspects of gauge amplitudes as color and kinematics with properties of generalized Euler integrals. In this part II the structure of the multiple hypergeometric functions is analyzed in detail: their relations to monodromy equations, their minimal basis structure, and methods to determine their poles and transcendentality properties are proposed. Finally, a Gröbner basis analysis provides independent sets of rational functions in the Euler integrals.

  19. Distortion-free single point imaging of multi-layered composite sandwich panel structures.

    Science.gov (United States)

    Marble, Andrew E; Mastikhin, Igor V; MacGregor, Rod P; Akl, Mohamad; LaPlante, Gabriel; Colpitts, Bruce G; Lee-Sullivan, Pearl; Balcom, Bruce J

    2004-05-01

    The results of a magnetic resonance imaging (MRI) investigation concerning the effects of an aluminum honeycomb sandwich panel on the B1 and B0 fields and on subsequent image quality are presented. Although the sandwich panel structure, representative of an aircraft composite material, distorts B0 and attenuates B1, distortion-free imaging is possible using single point (constant time) imaging techniques. A new expression is derived for the error caused by gradient field distortion due to the heterogeneous magnetic susceptibility within a sample and this error is shown not to cause geometric distortion in the image. The origin of the B0 distortion in the sample under investigation was also examined. The graphite-epoxy 'skin' of the panel is the principal source of the B0 distortion. Successful imaging of these structures sets the stage for the development of methods for detecting moisture ingress and degradation within composite sandwich structures.

  20. Fast Magnetoacoustic Waves in a Fan Structure Above a Coronal Magnetic Null Point

    Science.gov (United States)

    Mészárosová, H.; Dudík, J.; Karlický, M.; Madsen, F. R. H.; Sawant, H. S.

    2013-04-01

    We analyze the 26 November 2005 solar radio event observed interferometrically at frequencies of 244 and 611 MHz by the Giant Metrewave Radio Telescope (GMRT) in Pune, India. These observations are used to make interferometric maps of the event at both frequencies with the time cadence of 1 s from 06:50 to 07:12 UT. These maps reveal several radio sources. The light curves of these sources show that only two sources at 244 MHz and 611 MHz are well correlated in time. The EUV flare is more localized with flare loops located rather away from the radio sources. Using SoHO/MDI observations and potential magnetic field extrapolation we demonstrate that both the correlated sources are located in the fan structure of magnetic field lines starting from a coronal magnetic null point. Wavelet analysis of the light curves of the radio sources detects tadpoles with periods in the range P=10 - 83 s. These wavelet tadpoles indicate the presence of fast magnetoacoustic waves that propagate in the fan structure of the coronal magnetic null point. We estimate the plasma parameters in the studied radio sources and find them consistent with the presented scenario involving the coronal magnetic null point.

  1. Structure Based Thermostability Prediction Models for Protein Single Point Mutations with Machine Learning Tools.

    Science.gov (United States)

    Jia, Lei; Yarlagadda, Ramya; Reed, Charles C

    2015-01-01

    Thermostability issue of protein point mutations is a common occurrence in protein engineering. An application which predicts the thermostability of mutants can be helpful for guiding decision making process in protein design via mutagenesis. An in silico point mutation scanning method is frequently used to find "hot spots" in proteins for focused mutagenesis. ProTherm (http://gibk26.bio.kyutech.ac.jp/jouhou/Protherm/protherm.html) is a public database that consists of thousands of protein mutants' experimentally measured thermostability. Two data sets based on two differently measured thermostability properties of protein single point mutations, namely the unfolding free energy change (ddG) and melting temperature change (dTm) were obtained from this database. Folding free energy change calculation from Rosetta, structural information of the point mutations as well as amino acid physical properties were obtained for building thermostability prediction models with informatics modeling tools. Five supervised machine learning methods (support vector machine, random forests, artificial neural network, naïve Bayes classifier, K nearest neighbor) and partial least squares regression are used for building the prediction models. Binary and ternary classifications as well as regression models were built and evaluated. Data set redundancy and balancing, the reverse mutations technique, feature selection, and comparison to other published methods were discussed. Rosetta calculated folding free energy change ranked as the most influential features in all prediction models. Other descriptors also made significant contributions to increasing the accuracy of the prediction models.

  2. Automatic registration of Iphone images to LASER point clouds of the urban structures using shape features

    Science.gov (United States)

    Sirmacek, B.; Lindenbergh, R. C.; Menenti, M.

    2013-10-01

    Fusion of 3D airborne laser (LIDAR) data and terrestrial optical imagery can be applied in 3D urban modeling and model up-dating. The most challenging aspect of the fusion procedure is registering the terrestrial optical images on the LIDAR point clouds. In this article, we propose an approach for registering these two different data from different sensor sources. As we use iPhone camera images which are taken in front of the interested urban structure by the application user and the high resolution LIDAR point clouds of the acquired by an airborne laser sensor. After finding the photo capturing position and orientation from the iPhone photograph metafile, we automatically select the area of interest in the point cloud and transform it into a range image which has only grayscale intensity levels according to the distance from the image acquisition position. We benefit from local features for registering the iPhone image to the generated range image. In this article, we have applied the registration process based on local feature extraction and graph matching. Finally, the registration result is used for facade texture mapping on the 3D building surface mesh which is generated from the LIDAR point cloud. Our experimental results indicate possible usage of the proposed algorithm framework for 3D urban map updating and enhancing purposes.

  3. Structure Based Thermostability Prediction Models for Protein Single Point Mutations with Machine Learning Tools.

    Directory of Open Access Journals (Sweden)

    Lei Jia

    Full Text Available Thermostability issue of protein point mutations is a common occurrence in protein engineering. An application which predicts the thermostability of mutants can be helpful for guiding decision making process in protein design via mutagenesis. An in silico point mutation scanning method is frequently used to find "hot spots" in proteins for focused mutagenesis. ProTherm (http://gibk26.bio.kyutech.ac.jp/jouhou/Protherm/protherm.html is a public database that consists of thousands of protein mutants' experimentally measured thermostability. Two data sets based on two differently measured thermostability properties of protein single point mutations, namely the unfolding free energy change (ddG and melting temperature change (dTm were obtained from this database. Folding free energy change calculation from Rosetta, structural information of the point mutations as well as amino acid physical properties were obtained for building thermostability prediction models with informatics modeling tools. Five supervised machine learning methods (support vector machine, random forests, artificial neural network, naïve Bayes classifier, K nearest neighbor and partial least squares regression are used for building the prediction models. Binary and ternary classifications as well as regression models were built and evaluated. Data set redundancy and balancing, the reverse mutations technique, feature selection, and comparison to other published methods were discussed. Rosetta calculated folding free energy change ranked as the most influential features in all prediction models. Other descriptors also made significant contributions to increasing the accuracy of the prediction models.

  4. An optimized structure on FPGA of key point description in SIFT algorithm

    Science.gov (United States)

    Xu, Chenyu; Peng, Jinlong; Zhu, En; Zou, Yuxin

    2015-12-01

    SIFT algorithm is one of the most significant and effective algorithms to describe the features of image in the field of image matching. To implement SIFT algorithm to hardware environment is apparently considerable and difficult. In this paper, we mainly discuss the realization of Key Point Description in SIFT algorithm, along with Matching process. In Key Point Description, we have proposed a new method of generating histograms, to avoid the rotation of adjacent regions and insure the rotational invariance. In Matching, we replace conventional Euclidean distance with Hamming distance. The results of the experiments fully prove that the structure we propose is real-time, accurate, and efficient. Future work is still needed to improve its performance in harsher conditions.

  5. N-point statistics of large-scale structure in the Zel'dovich approximation

    Energy Technology Data Exchange (ETDEWEB)

    Tassev, Svetlin, E-mail: tassev@astro.princeton.edu [Department of Astrophysical Sciences, Princeton University, 4 Ivy Lane, Princeton, NJ 08544 (United States)

    2014-06-01

    Motivated by the results presented in a companion paper, here we give a simple analytical expression for the matter n-point functions in the Zel'dovich approximation (ZA) both in real and in redshift space (including the angular case). We present numerical results for the 2-dimensional redshift-space correlation function, as well as for the equilateral configuration for the real-space 3-point function. We compare those to the tree-level results. Our analysis is easily extendable to include Lagrangian bias, as well as higher-order perturbative corrections to the ZA. The results should be especially useful for modelling probes of large-scale structure in the linear regime, such as the Baryon Acoustic Oscillations. We make the numerical code used in this paper freely available.

  6. A Matérn model of the spatial covariance structure of point rain rates

    KAUST Repository

    Sun, Ying

    2014-07-15

    It is challenging to model a precipitation field due to its intermittent and highly scale-dependent nature. Many models of point rain rates or areal rainfall observations have been proposed and studied for different time scales. Among them, the spectral model based on a stochastic dynamical equation for the instantaneous point rain rate field is attractive, since it naturally leads to a consistent space–time model. In this paper, we note that the spatial covariance structure of the spectral model is equivalent to the well-known Matérn covariance model. Using high-quality rain gauge data, we estimate the parameters of the Matérn model for different time scales and demonstrate that the Matérn model is superior to an exponential model, particularly at short time scales.

  7. Multi critical point structure for chiral phase transition induce by charge neutrality and vector interaction

    CERN Document Server

    Zhang, Zhao

    2010-01-01

    The combined effect of the repulsive vector interaction and the positive electric chemical potential on the chiral phase transition is investigated by considering neutral color superconductivity. Under the charge-neutrality constraint, the chiral condensate, diquark condensate and quark number densities are obtained in two-plus-one-flavor Nambu-Jona-Lasinio model with the so called Kobayashi-Maskawa-'t Hooft term. We demonstrate that multiple chiral critical-point structures always exist in the Nambu-Jona-Lasinio model within the self-consistent mean-field approximation, and that the number of chiral critical points can vary from zero to four, which is dependent on the magnitudes of vector interaction and the diquark coupling.

  8. Three-dimensional fine structure of the organization of microtubules in neurite varicosities by ultra-high voltage electron microscope tomography.

    Science.gov (United States)

    Nishida, Tomoki; Yoshimura, Ryoichi; Endo, Yasuhisa

    2017-06-23

    Neurite varicosities are highly specialized compartments that are involved in neurotransmitter/ neuromodulator release and provide a physiological platform for neural functions. However, it remains unclear how microtubule organization contributes to the form of varicosity. Here, we examine the three-dimensional structure of microtubules in varicosities of a differentiated PC12 neural cell line using ultra-high voltage electron microscope tomography. Three-dimensional imaging showed that a part of the varicosities contained an accumulation of organelles that were separated from parallel microtubule arrays. Further detailed analysis using serial sections and whole-mount tomography revealed microtubules running in a spindle shape of swelling in some other types of varicosities. These electron tomographic results showed that the structural diversity and heterogeneity of microtubule organization supported the form of varicosities, suggesting that a different distribution pattern of microtubules in varicosities is crucial to the regulation of varicosities development.

  9. Temperature dependence of the microscopic structure and density anomaly of the SPC/E and TIP4P-Ew water models. Molecular dynamics simulation results

    Directory of Open Access Journals (Sweden)

    E. Galicia-Andrés

    2015-03-01

    Full Text Available We have investigated temperature trends of the microscopic structure of the SPC/E and TIP4P-Ew water models in terms of the pair distribution functions, coordination numbers, the average number of hydrogen bonds, the distribution of bonding states of a single molecule as well as the angular distribution of molecules by using the constant pressure molecular dynamics simulations. The evolution of the structure is put in correspondence with the dependence of water density on high temperatures down to the region of temperatures where the system becomes supercooled. It is shown that the fraction of molecules with three and four bonds determine the maximum density for both models. Moreover, the temperature dependence of the dielectric constant is obtained and analyzed.

  10. Structural and textural characteristics of slate and its response to the point load test

    Directory of Open Access Journals (Sweden)

    Ana Mladenovič

    2006-12-01

    Full Text Available From the geomechanical point of view slate is considered to be one of more trying rock varieties. The results of research have shown close relationship between structural, textural and mineralogical characteristics on the one hand, and its strength and resistance to point loads on the other hand. Its weakened zones are the result of anisotropy. They develop mainly due to dynamo-metamorphosis of the primary mudstone, resulting in the formation of the secondary slaty cleavage, with a pronounced preferred orientation of the hyllosilicates. Low strength is the consequence of the weak Van der Waals chemical bond between individual packets of the internal crystal structure of the sheet minerals, particularly sericite. Bedding and microfolds with a crenulated structure and partial preferred orientation of sheet minerals, as well as directions that are weakened with sigmoidal shear deformations as the predecessors of microfaults, also result in significant but less problematicanisotropy. Thin lepidoblastic lamina, in apparently massive sandy metasiltstone beds in the slate represent discontinuities, which have a decisive influence on the reduction of their strength.

  11. Automated Voxel Model from Point Clouds for Structural Analysis of Cultural Heritage

    Science.gov (United States)

    Bitelli, G.; Castellazzi, G.; D'Altri, A. M.; De Miranda, S.; Lambertini, A.; Selvaggi, I.

    2016-06-01

    In the context of cultural heritage, an accurate and comprehensive digital survey of a historical building is today essential in order to measure its geometry in detail for documentation or restoration purposes, for supporting special studies regarding materials and constructive characteristics, and finally for structural analysis. Some proven geomatic techniques, such as photogrammetry and terrestrial laser scanning, are increasingly used to survey buildings with different complexity and dimensions; one typical product is in form of point clouds. We developed a semi-automatic procedure to convert point clouds, acquired from laserscan or digital photogrammetry, to a filled volume model of the whole structure. The filled volume model, in a voxel format, can be useful for further analysis and also for the generation of a Finite Element Model (FEM) of the surveyed building. In this paper a new approach is presented with the aim to decrease operator intervention in the workflow and obtain a better description of the structure. In order to achieve this result a voxel model with variable resolution is produced. Different parameters are compared and different steps of the procedure are tested and validated in the case study of the North tower of the San Felice sul Panaro Fortress, a monumental historical building located in San Felice sul Panaro (Modena, Italy) that was hit by an earthquake in 2012.

  12. Development of quantitative structure property relationships for predicting the melting point of energetic materials.

    Science.gov (United States)

    Morrill, Jason A; Byrd, Edward F C

    2015-11-01

    The accurate prediction of the melting temperature of organic compounds is a significant problem that has eluded researchers for many years. The most common approach used to develop predictive models entails the derivation of quantitative structure-property relationships (QSPRs), which are multivariate linear relationships between calculated quantities that are descriptors of molecular or electronic features and a property of interest. In this report the derivation of QSPRs to predict melting temperatures of energetic materials based on descriptors calculated using the AM1 semiempirical quantum mechanical method are described. In total, the melting points and experimental crystal structures of 148 energetic materials were analyzed. Principal components analysis was performed in order to assess the relative importance and roles of the descriptors in our QSPR models. Also described are the results of k means cluster analysis, performed in order to identify natural groupings within our study set of structures. The QSPR models resulting from these analyses gave training set R(2) values of 0.6085 (RMSE = ± 15.7 °C) and 0.7468 (RMSE = ± 13.2 °C). The test sets for these clusters had R(2) values of 0.9428 (RMSE = ± 7.0 °C) and 0.8974 (RMSE = ± 8.8 °C), respectively. These models are among the best melting point QSPRs yet published for energetic materials. Copyright © 2015 Elsevier Inc. All rights reserved.

  13. Structure and energy of point defects in TiC: An ab initio study

    Science.gov (United States)

    Sun, Weiwei; Ehteshami, Hossein; Korzhavyi, Pavel A.

    2015-04-01

    We employ first-principles calculations to study the atomic and electronic structure of various point defects such as vacancies, interstitials, and antisites in the stoichiometric as well as slightly off-stoichiometric Ti1 -cCc (including both C-poor and C-rich compositions, 0.49 ≤c ≤0.51 ). The atomic structure analysis has revealed that both interstitial and antisite defects can exist in split conformations involving dumbbells. To characterize the electronic structure changes caused by a defect, we introduce differential density of states (dDOS) defined as a local perturbation of the density of states (DOS) on the defect site and its surrounding relative to the perfect TiC. This definition allows us to identify the DOS peaks characteristic of the studied defects in several conformations. So far, characteristic defect states have been discussed only in connection with carbon vacancies. Here, in particular, we have identified dDOS peaks of carbon interstitials and dumbbells, which can be used for experimental detection of such defects in TiC. The formation energies of point defects in TiC are derived in the framework of a grand-canonical formalism. Among the considered defects, carbon vacancies and interstitials are shown to have, respectively, the lowest and the second-lowest formation energies. Their formation energetics are consistent with the thermodynamic data on the phase stability of nonstoichiometric TiC. A cluster type of point defect is found to be next in energy, a titanium [100] dumbbell terminated by two carbon vacancies.

  14. Points or vectors? The polar structure of disclinations in active and passive nematics

    Science.gov (United States)

    Giomi, Luca; Vromans, Arthur

    Topological defects play a pivotal role in the physics of liquid crystals and represent one of the most prominent and well studied aspects of mesophases. While in two-dimensional nematics, disclinations are traditionally treated as point-like objects, recent experimental studies on active nematics have suggested that half-strength disclinations might in fact posses a polar structure. In this talk I will provide a precise definition of polarity for half-strength nematic disclinations, introduce a simple and robust method to calculate this quantity from experimental and numerical data and investigate how the orientational properties of active and passive half-strength disclinations affect their dynamics.

  15. Weak Uniform Normal Structure and Fixed Points of Asymptotically Regular Semigroups

    Institute of Scientific and Technical Information of China (English)

    Lu Chuan ZENG

    2004-01-01

    Let X be a Banach space with a weak uniform normal structure and C a non-empty convexweakly compact subset of X. Under some suitable restriction, we prove that every asymptoticallyregular semigroup T = {T(t): t ∈ S} of selfmappings on C satisfyinglim inf |‖T(t)‖| < WCS(X)S(∈)t→∞has a common fixed point, where WCS(X) is the weakly convergent sequence coefficient of X, and |‖T(t) ‖ | is the exact Lipschitz constant of T(t).

  16. Les structures argumentatives de la locution adverbiale polyvalente jusqu’à un certain point

    Directory of Open Access Journals (Sweden)

    Constanze Armbrecht

    2011-07-01

    Full Text Available Dans cet article nous esquissons les structures argumentatives possibles activées par l’emploi de la locution adverbiale polyfonctionnelle – quantitative et modale – jusqu’à un certain point (JCP sur un corpus de 287 occurrences tirées du Monde. Nous montrerons quels avantages le locuteur peut retirer de l’emploi de la locution pour structurer son argumentation. Jusqu’à un certain point permet, en effet, une forme d’argumentation apparentée aux emplois du mais dit d’argumentation, connecteur auquel JCP s’associe souvent. Alors que les valeurs modales ne permettent pas à JCP de construire des cadres de discours, sa portée sémantique peut organiser le discours au-delà de la phrase. Celui-ci est ainsi présenté comme argumentant en faveur de (emploi plus rare ou contre (emploi le plus fréquent les conclusions à tirer des propos modifiés par la locution.This paper sketches out possible argumentation structures that are activated by the use of the adverbial jusqu’à un certain point as found in a corpus of examples taken from Le Monde. It is in fact a multifunctional adverbial with both quantificational and modal properties. We show what benefit a writer may gain in using the adverbial in order to structure his or her argumentation. Jusqu’à un certain point allows one to argue in a way similar to that when using the so-called mais d’argumentation, and it is easily combined with this connector. While its modal properties will not allow it to form frames for discourse, its semantic scope can organize discourse beyond the sentence. This discourse is thus presented as either arguing in favor of (rarely or in opposition to (most frequently the conclusions that can be drawn from the proposition modified by the adverbial.

  17. The Bi-directional Moving Structures in a Coronal Bright Point

    CERN Document Server

    Li, Dong; Su, Yingna

    2016-01-01

    We report the bi-directional moving structures in a coronal bright point (CBP) on 2015 July 14. It is observed by the Atmospheric Imaging Assembly (AIA) onboard Solar Dynamics Observatory (SDO). This CBP has a lifetime of about 10 minutes, and a curved shape. The observations show that many bright structures are moving intermittently outward from the CBP brightness core. Such moving structures are clearly seen at AIA 171, 193, 211, 131, 94, 335 and 304 A, slit-jaw (SJI) 1330 and 1400 A. In order to analyze these moving structures, the CBP is cut along the moving direction with a curved slit from the AIA and SJI images. Then we can obtain the time-distance slices, including the intensity and intensity-derivative diagrams, from which, the moving structures are recognized as the oblique streaks, and they are characterized by the bi-direction, simultaneity, symmetry, and periodicity. The average speed is around 300 km/s, while the typically period is about 90 s. All these features (including the bi-directional fl...

  18. VERTICAL PROJECTION EFFICIENCY OF PIVOT POINTS USING ELECTRONIC TACHEOMETER DURING CONSTRUCTION OF BUILDINGS AND STRUCTURES

    Directory of Open Access Journals (Sweden)

    M. S. Nesterenok

    2014-01-01

    Full Text Available The paper shows that functional limitation of zenith devices and introduction of modern high-accuracy electronic tacheometers should lead to substitution of the mentioned devices for tacheometers in geodesic works concerning vertical projection of pivot points of the constructed buildings and structures. However the electronic tacheometer has not been considered in the function of a zenith device in ТКП 45-1.03-26-2006.Special experiemnts and practical works executed by UE “Geokart” has proved that in accordance with its design the electronic tacheometer equipped with a compensator for small inclinations and zenith prism attachment for ocular can be applied as a vertical projection device while setting sighting line of a telescope in a fixed vertical position. Corresponding experiments have been carried out for multi-storied building of business centre located in the M. Tank Street in Minsk in order to obtain comparative characteristics of vertical projection accuracy with the help of tacheometer TOPCON GPT 7501 and zenith device PZL-100. An initial point of the staked grid has been situated at the elevation ±0,0 м, standard graph elevation has been equal to +49,5 м (concrete slab of the 14th floor, projection height referred to the device has been equal to Н = 47,8 м. Both devices have been set on the same stand using a purpose made adaptive device in order to exclude centering errors. Deviation in position of final projection points on the standard graph which were obtained with the help of two devices has been equal to 1.2 mm, that testifies practical equal accuracy of the zenith device and tacheometer for vertical projection function.Additional advantage of the electronic tacheometer in comparison with special vertical projection devi ces lies in the fact that in the case of a certain misalignment of geodesic openings in intermediate floors ta- cheometer deviating from the vertical makes it possible to carry out initial point

  19. Atomically resolved structural determination of graphene and its point defects via extrapolation assisted phase retrieval

    Energy Technology Data Exchange (ETDEWEB)

    Latychevskaia, Tatiana; Fink, Hans-Werner [Physics Department, University of Zurich, Winterthurerstrasse 190, 8057 Zurich (Switzerland)

    2015-01-12

    Previously reported crystalline structures obtained by an iterative phase retrieval reconstruction of their diffraction patterns seem to be free from displaying any irregularities or defects in the lattice, which appears to be unrealistic. We demonstrate here that the structure of a nanocrystal including its atomic defects can unambiguously be recovered from its diffraction pattern alone by applying a direct phase retrieval procedure not relying on prior information of the object shape. Individual point defects in the atomic lattice are clearly apparent. Conventional phase retrieval routines assume isotropic scattering. We show that when dealing with electrons, the quantitatively correct transmission function of the sample cannot be retrieved due to anisotropic, strong forward scattering specific to electrons. We summarize the conditions for this phase retrieval method and show that the diffraction pattern can be extrapolated beyond the original record to even reveal formerly not visible Bragg peaks. Such extrapolated wave field pattern leads to enhanced spatial resolution in the reconstruction.

  20. Numerical renormalization group for impurity quantum phase transitions: structure of critical fixed points

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Hyun-Jung [Theoretische Physik III, Elektronische Korrelationen und Magnetismus, Institut fuer Physik, Universitaet Augsburg, D-86135 Augsburg (Germany); Bulla, Ralf [Theoretische Physik III, Elektronische Korrelationen und Magnetismus, Institut fuer Physik, Universitaet Augsburg, D-86135 Augsburg (Germany); Vojta, Matthias [Institut fuer Theorie der Kondensierten Materie, Universitaet Karlsruhe, D-76128 Karlsruhe (Germany)

    2005-11-02

    The numerical renormalization group method is used to investigate zero-temperature phase transitions in quantum impurity systems, in particular in the particle-hole symmetric soft-gap Anderson model. The model displays two stable phases whose fixed points can be built up of non-interacting single-particle states. In contrast, the quantum phase transitions turn out to be described by interacting fixed points, and their excitations cannot be described in terms of free particles. We show that the structure of the many-body spectrum of these critical fixed points can be understood using renormalized perturbation theory close to certain values of the bath exponents which play the role of critical dimensions. Contact is made with perturbative renormalization group calculations for the soft-gap Anderson and Kondo models. A complete description of the quantum critical many-particle spectra is achieved using suitable marginal operators; technically this can be understood as epsilon-expansion for full many-body spectra.

  1. Numerical renormalization group for impurity quantum phase transitions: structure of critical fixed points

    Science.gov (United States)

    Lee, Hyun-Jung; Bulla, Ralf; Vojta, Matthias

    2005-11-01

    The numerical renormalization group method is used to investigate zero-temperature phase transitions in quantum impurity systems, in particular in the particle-hole symmetric soft-gap Anderson model. The model displays two stable phases whose fixed points can be built up of non-interacting single-particle states. In contrast, the quantum phase transitions turn out to be described by interacting fixed points, and their excitations cannot be described in terms of free particles. We show that the structure of the many-body spectrum of these critical fixed points can be understood using renormalized perturbation theory close to certain values of the bath exponents which play the role of critical dimensions. Contact is made with perturbative renormalization group calculations for the soft-gap Anderson and Kondo models. A complete description of the quantum critical many-particle spectra is achieved using suitable marginal operators; technically this can be understood as epsilon-expansion for full many-body spectra.

  2. Classical integrability for three-point functions: cognate structure at weak and strong couplings

    Energy Technology Data Exchange (ETDEWEB)

    Kazama, Yoichi [Research Center for Mathematical Physics, Rikkyo University,Toshima-ku, Tokyo 171-8501 (Japan); Quantum Hadron Physics Laboratory, RIKEN Nishina Center, Wako 351-0198 (Japan); Institute of Physics, University of Tokyo, Komaba, Meguro-ku, Tokyo 153-8902 (Japan); Komatsu, Shota [Perimeter Institute for Theoretical Physics,31 Caroline Street North, Waterloo, Ontario, N2L 2Y5 (Canada); Nishimura, Takuya [Institute of Physics, University of Tokyo, Komaba, Meguro-ku, Tokyo 153-8902 (Japan)

    2016-10-10

    In this paper, we develop a new method of computing three-point functions in the SU(2) sector of the N=4 super Yang-Mills theory in the semi-classical regime at weak coupling, which closely parallels the strong coupling analysis. The structure threading two disparate regimes is the so-called monodromy relation, an identity connecting the three-point functions with and without the insertion of the monodromy matrix. We shall show that this relation can be put to use directly for the semi-classical regime, where the dynamics is governed by the classical Landau-Lifshitz sigma model. Specifically, it reduces the problem to a set of functional equations, which can be solved once the analyticity in the spectral parameter space is specified. To determine the analyticity, we develop a new universal logic applicable at both weak and strong couplings. As a result, compact semi-classical formulas are obtained for a general class of three-point functions at weak coupling including the ones whose semi-classical behaviors were not known before. In addition, the new analyticity argument applied to the strong coupling analysis leads to a modification of the integration contour, producing the results consistent with the recent hexagon bootstrap approach. This modification also makes the Frolov-Tseytlin limit perfectly agree with the weak coupling form.

  3. Infrared behavior and fixed-point structure in the compactified Ginzburg--Landau model

    CERN Document Server

    Linhares, C A; Souza, M L

    2011-01-01

    We consider the Euclidean $N$-component Ginzburg--Landau model in $D$ dimensions, of which $d$ ($d\\leq D$) of them are compactified. As usual, temperature is introduced through the mass term in the Hamiltonian. This model can be interpreted as describing a system in a region of the $D$-dimensional space, limited by $d$ pairs of parallel planes, orthogonal to the coordinates axis $x_1,\\,x_2,\\,...,\\,x_d$. The planes in each pair are separated by distances $L_1,\\;L_2,\\; ...,\\,L_d$. For $D=3$, from a physical point of view, the system can be supposed to describe, in the cases of $d=1$, $d=2$, and $d=3$, respectively, a superconducting material in the form of a film, of an infinitely long wire having a retangular cross-section and of a brick-shaped grain. We investigate in the large-$N$ limit the fixed-point structure of the model, in the absence or presence of an external magnetic field. An infrared-stable fixed point is found, whether of not an external magnetic field is applied, but for different ranges of valu...

  4. Classical Integrability for Three-point Functions: Cognate Structure at Weak and Strong Couplings

    CERN Document Server

    Kazama, Y; Nishimura, T

    2016-01-01

    In this paper, we develop a new method of computing three-point functions in the SU(2) sector of the $\\mathcal{N}=4$ super Yang-Mills theory in the semi-classical regime at weak coupling, which closely parallels the strong coupling analysis. The structure threading two disparate regimes is the so-called monodromy relation, an identity connecting the three-point functions with and without the insertion of the monodromy matrix. We shall show that this relation can be put to use directly for the semi-classical regime, where the dynamics is governed by the classical Landau-Lifshitz sigma model. Specifically, it reduces the problem to a set of functional equations, which can be solved once the analyticity in the spectral parameter space is specified. To determine the analyticity, we develop a new universal logic applicable at both weak and strong couplings. As a result, compact semi-classical formulas are obtained for a general class of three-point functions at weak coupling including the ones whose semi-classical...

  5. Quantifying structural uncertainty on fault networks using a marked point process within a Bayesian framework

    Science.gov (United States)

    Aydin, Orhun; Caers, Jef Karel

    2017-08-01

    Faults are one of the building-blocks for subsurface modeling studies. Incomplete observations of subsurface fault networks lead to uncertainty pertaining to location, geometry and existence of faults. In practice, gaps in incomplete fault network observations are filled based on tectonic knowledge and interpreter's intuition pertaining to fault relationships. Modeling fault network uncertainty with realistic models that represent tectonic knowledge is still a challenge. Although methods that address specific sources of fault network uncertainty and complexities of fault modeling exists, a unifying framework is still lacking. In this paper, we propose a rigorous approach to quantify fault network uncertainty. Fault pattern and intensity information are expressed by means of a marked point process, marked Strauss point process. Fault network information is constrained to fault surface observations (complete or partial) within a Bayesian framework. A structural prior model is defined to quantitatively express fault patterns, geometries and relationships within the Bayesian framework. Structural relationships between faults, in particular fault abutting relations, are represented with a level-set based approach. A Markov Chain Monte Carlo sampler is used to sample posterior fault network realizations that reflect tectonic knowledge and honor fault observations. We apply the methodology to a field study from Nankai Trough & Kumano Basin. The target for uncertainty quantification is a deep site with attenuated seismic data with only partially visible faults and many faults missing from the survey or interpretation. A structural prior model is built from shallow analog sites that are believed to have undergone similar tectonics compared to the site of study. Fault network uncertainty for the field is quantified with fault network realizations that are conditioned to structural rules, tectonic information and partially observed fault surfaces. We show the proposed

  6. A study on the effect of crack in concrete structure in the point of radiation shielding

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Chang-Min; Lee, Yoon-Hee; Lee, Kun-Jai [KAIST, Daejeon (Korea, Republic of); Cho, Cheon-Hyung; Choi, Byung-Il; Lee, Heung-Young [Nuclear Environment Technology Institute, Daejeon (Korea, Republic of)

    2005-11-15

    The saturation of South Korea's at-reactor (AR) spent fuel storage pools has created a necessity for additional spent fuel storage capacity. Because the South Korean government has a plan to increase the number of nuclear power plants to 27 units by 2016, the increase of spent nuclear fuel generation will be accelerated. Because there is no concrete plan for spent unclear fuel permanent disposal, the Korea hydraulic nuclear power company is planning to construct dry storage facility. Spent nuclear fuel from CANDU type nuclear power plant will be stored in MACSTOR-400 composed by reinforced concrete. Because it is new model, it has to be licensed. Life time estimation is needed for licensing. Deterioration of reinforced concrete structure is currently of great concern for life time estimation. The most significant form of deterioration is reinforcement corrosion that gives rise to crack the concrete structure. In this study, in order to estimate the life time of MACSTOR, the tendency of crack creation, propagation and the effect of crack in concrete structure against radiation shielding are investigated. Crack creation and propagation depends on concrete cover thickness and c/d ratio. The surface dose rate at the concrete shield in MACSTOR is simulated by MCNP code about several cases. Generally in the case of point source, surface dose rate depends on shape, width and length of crack. In the case of MACSTOR-400, It is estimated that crack is not dominant factor in the point of radiation shielding in less than 0.4mm of crack width. Above results will be helpful to estimate the life time of concrete structure as radiation shield.

  7. Cluster magnetic field observations in the magnetosheath: four-point measurements of mirror structures

    Directory of Open Access Journals (Sweden)

    E. A. Lucek

    Full Text Available The Cluster spacecraft have returned the first simultaneous four-point measurements of the magnetosheath. We present an analysis of data recorded on 10 November 2000, when the four spacecrafts observed an interval of strong mirrorlike activity. Correlation analysis between spacecraft pairs is used to examine the scale size of the mirror structures in three dimensions. Two examples are presented which suggest that the scale size of mirror structures is ~ 1500–3000 km along the flow direction, and shortest along the magnetopause normal (< 600 km, which, in this case, is approximately perpendicular to both the mean magnetic field and the magnetosheath flow vector. Variations on scales of ~ 750–1000 km are found along the maximum variance direction. The level of correlation in this direction, however, and the time lag observed, are found to be variable. These first results suggest that variations occur on scales of the order of the spacecraft separation ( ~ 1000 km in at least two directions, but analysis of further examples and a statistical survey of structures observed with different magnetic field orientations and tetrahedral configurations will enable us to describe more fully the size and orientation of mirror structures.

    Key words. Magnetosphenic physics (magnetosheath; plasma waves and instabilities

  8. Automated Reconstruction of Historic Roof Structures from Point Clouds - Development and Examples

    Science.gov (United States)

    Pöchtrager, M.; Styhler-Aydın, G.; Döring-Williams, M.; Pfeifer, N.

    2017-08-01

    The analysis of historic roof constructions is an important task for planning the adaptive reuse of buildings or for maintenance and restoration issues. Current approaches to modeling roof constructions consist of several consecutive operations that need to be done manually or using semi-automatic routines. To increase efficiency and allow the focus to be on analysis rather than on data processing, a set of methods was developed for the fully automated analysis of the roof constructions, including integration of architectural and structural modeling. Terrestrial laser scanning permits high-detail surveying of large-scale structures within a short time. Whereas 3-D laser scan data consist of millions of single points on the object surface, we need a geometric description of structural elements in order to obtain a structural model consisting of beam axis and connections. Preliminary results showed that the developed methods work well for beams in flawless condition with a quadratic cross section and no bending. Deformations or damages such as cracks and cuts on the wooden beams can lead to incomplete representations in the model. Overall, a high degree of automation was achieved.

  9. Microscopic and mesoscopic structural features of an activated carbon sample, prepared from sorghum via activation by phosphoric acid

    Energy Technology Data Exchange (ETDEWEB)

    Temleitner, László [SPring-8, JASRI, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5198 (Japan); Pusztai, László, E-mail: pusztai.laszlo@wigner.mta.hu [Institute for Solid State Physics and Optics, Wigner Research Centre for Physics, Hungarian Academy of Sciences, P.O. Box 49, H-1525 Budapest (Hungary); Rubio-Arroyo, Manuel F.; Aguilar-López, Sergio [Instituto de Quimica, UNAM, Circuito Exterior S/N, Ciudad Universitaria, Coyoacán, México D.F. 04510 (Mexico); Klimova, Tatiana [Facultad de Quimica, UNAM, Edif. E, Ciudad Universitaria, Coyoacán, México D.F. 04510 (Mexico); Pizio, Orest [Instituto de Quimica, UNAM, Circuito Exterior S/N, Ciudad Universitaria, Coyoacán, México D.F. 04510 (Mexico)

    2012-12-15

    Graphical abstract: Display Omitted Highlights: ► Preparation of a new activated carbon sample from sorghum. ► Characterization by adsorption/desorption methods. ► Determination of the structure by synchrotron X-ray diffraction. ► The sample is amorphous and contains distorted graphene fragments. ► A characteristic nanoscale distance is established from the radial distribution function. -- Abstract: An acidic chemical activation procedure has been used for preparing activated carbon with a surface area exceeding 1000 m{sup 2}/g from sorghum. In order to reveal structural features, synchrotron X-ray diffraction measurements have been performed. The structure of the material has been characterized by the total scattering structure factor and the radial distribution function describing short-range arrangement of atoms at distances of the order of a few atomic diameters as well as correlations at a longer scale, of the order of nanometers. The atomic arrangement has been found to be consistent with that of amorphous graphite-like carbon. As far as the mesoscopic structure is concerned, the presence of a characteristic distance is suggested on the basis of the clear nanometer scale oscillations of the radial distribution function, which distance may be assigned as the mesopore size in the material. It is suggested that the approach devized here may later be applied routinely for other activated carbon samples, too, for characterizing atomic and nanoscale order simultaneously.

  10. On the relation between the microscopic structure and the sound velocity anomaly in elemental melts of groups IV, V, VI

    CERN Document Server

    Greenberg, Yaron; Caspi, El'ad N; Beuneu, Brigitte; Dariel, Moshe P; Makov, Guy

    2010-01-01

    The sound velocity of some liquid elements of groups IV, V and VI, as reported in the literature, displays anomalous features that set them apart from other liquid metals. In an effort to determine a possible common origin of these anomalies, extensive neutron diffraction measurements of liquid Bi and Sb were carried out over a wide temperature range. The structure factors of liquid Sb and Bi were determined as a function of temperature. The structure of the two molten metals was carefully analyzed with respect to peak locations, widths and coordination number in their respective radial distribution function. The width of the peaks in the radial distribution function were not found to increase and even decreased within a certain temperature range. This anomalous temperature dependence of the peak widths correlates with the anomalous temperature dependence of the sound velocity. This correlation may be accounted for by increasing rigidity of the liquid structure with temperature. A phenomenological correlation...

  11. Evaluation of the interactions between polymeric chains and surfaces with different structures performed by an atomic force microscope

    Directory of Open Access Journals (Sweden)

    Oréfice Rodrigo Lambert

    1998-01-01

    Full Text Available Interactions between polymers and inorganic surfaces are present in a series of phenomena involving processes such as coagulation and deffloculation of ceramic powder and adsorption of organic macromolecules on the surface of implants, among others. In this work, Atomic Force Microscopy (AFM was modified to allow the evaluation of interactions between polymeric chains and inorganic surfaces (silica with different structures. Polymers (sulfonated polysulfone were grafted onto AFM cantilevers. AFM force-distance curves were obtained for this modified tip against a series of substrates produced by depositing silica films on silicon wafers. The structure of the silica layer was modified by employing heat treatments at different temperatures. The results showed that the interactions between polymer and surfaces are dependent on the structure of the surfaces. Penetration of the polymeric chains can occur through a soft gel layer (substrates treated at low temperature, 110 °C. For surfaces with dense silica layers, the results showed that not only the concentration of hydroxy groups but also their spatial distribution along the surfaces are important in defining the magnitude of interactions between polymers and surfaces. A model involving a molecular recognition process, in which interactions are maximized for inorganic surfaces with structures that can match the chemical architecture of the polymer, was then used to explain the obtained results.

  12. Spatial frequency analysis of high-density lipoprotein and iron-oxide nanoparticle transmission electron microscope image structure for pattern recognition in heterogeneous fields

    Science.gov (United States)

    Russell, Stewart; Nguyen, Thien An; Torres, Clyde Rey; Bhagroo, Stephen; Russell, Milo J.; Alfano, Robert R.

    2014-01-01

    The optical spatial frequencies of tumor interstitial fluid (TIF) are investigated. As a concentrated colloidal suspension of interacting native nanoparticles, the TIF can develop internal ordering under shear stress that may hinder delivery of antitumor agents within tumors. A systematic method is presented to characterize the TIF nanometer-scale microstructure in a model suspension of superparamagnetic iron-oxide nanoparticles and reconstituted high-density lipoprotein by Fourier spatial frequency (FSF) analysis so as to differentiate between jammed and fluid structural features in static transmission electron microscope images. The FSF method addresses one obstacle faced in achieving quantitative dosimetry to neoplastic tissue, that of detecting these nanoscale barriers to transport, such as would occur in the extravascular space immediately surrounding target cells.

  13. The microscopic structure of charge density waves in underdoped YBa2Cu3O6.54 revealed by X-ray diffraction

    DEFF Research Database (Denmark)

    Forgan, E.M.; Blackburn, E.; Holmes, A.T.;

    2015-01-01

    Charge density wave (CDW) order appears throughout the underdoped high-temperature cuprate superconductors, but the underlying symmetry breaking and the origin of the CDW remain unclear. We use X-ray diffraction to determine the microscopic structure of the CDWs in an archetypical cuprate YBa2Cu3O6...... with broken symmetry observed in scanning tunnelling microscopy and soft X-ray measurements........54 at its superconducting transition temperature ∼60 K. We find that the CDWs in this material break the mirror symmetry of the CuO2 bilayers. The ionic displacements in the CDWs have two components, which are perpendicular and parallel to the CuO2 planes, and are out of phase with each other. The planar...

  14. Freeze-fracture electron microscopic and low temperature x-ray scattering studies of the effect of cryofixation upon serum low density lipoprotein structure.

    Science.gov (United States)

    Aggerbeck, L P; Gulik-Krzywicki, T

    1982-06-01

    We report here a correlated X-ray diffraction and freeze-fracture electron microscope study of the effects of several cryofixation procedures upon human serum low density lipoprotein (LDL2) structure. Only when the LDL2 solutions contained 75%, by weight, glycerol were the room temperature and post cryofixation low temperature LDL2 X-ray scattering curves indistinguishable from one another. Other cryofixation procedures, slow or rapid, with or without glycerol, resulted in differences between the room temperature and low temperature LDL2 X-ray scattering curves, in part due to the effect of quenching upon the solvent. Freeze-etching electron microscopy of the slowly cryofixed LDL2 showed marked aggregation of the particles and an unusual morphological appearance. In contrast, after rapid cryofixation or cryofixation in the presence of glycerol, freeze-etch electron microscopy revealed well-isolated particles which had a knobby morphology. The results demonstrate that under certain conditions (in the presence of 75% glycerol) cryofixation results in minimal, if any, structural alteration of, at least, the LDL2 lipid moiety. Further, this study underlines the more general conclusion that any high resolution structural study employing a cryofixation step must be interpreted with caution and the effect of cryofixation upon the sample structure need be evaluated by independent means.

  15. Microscopic characterization of changes in the structure of KCo/CeO{sub 2} catalyst used in the steam reforming of ethanol

    Energy Technology Data Exchange (ETDEWEB)

    Słowik, Grzegorz, E-mail: Grzegorz.Slowik@poczta.umcs.lublin.pl; Greluk, Magdalena; Machocki, Andrzej

    2016-04-15

    The cobalt catalyst with a support of CeO{sub 2} and potassium promoted (KCo/CeO{sub 2}) was prepared by an impregnation method and used in the steam reforming of ethanol (SRE). The catalyst was characterized in its initial oxide form and after its work in the SRE by electron microscopy and EDS methods. Microscopic characterization of the catalyst allowed for identification of the active phase (in Co{sub 3}O{sub 4} form) and the CeO{sub 2} support phase (O-terminated), existing in the fresh catalyst, and also the active phase (at various forms, Co and CoO), support phase as well as various carbonaceous phases in the used catalyst. STEM-EDS studies allowed to determine the distribution of constituent elements in the catalyst before reaction and besides of them - also carbon deposit after the SRE. Microscopic studies of used catalyst proved that it was largely covered with carbonaceous deposit which was the main reason of deactivation of the catalyst. Carbon deposit growing during the reaction causes destruction of the support and the active phase into smaller particles which are sunked in the carbonaceous structures. - Highlights: • CeO{sub 2} and K promoter do not prevent cobalt catalyst from carbon formation in the SRE. • Carbon deposit was present in three forms: fibrous, encapsulates, partly surrounding. • Two types of carbon deposit structures: amorphous and hexagonal graphite were found. • Metallic cobalt and ceria support crystallites are present with K in fibrous carbon. • Cobalt active phase is present under SRE conditions as metallic Co and CoO.

  16. Macro- and microscopic spectral-polarization characteristics of the structure of normal and abnormally located chordae tendianeae of left ventricular

    Science.gov (United States)

    Malyk, Yu. Yu.; Prydij, O. G.; Zymnyakov, D. A.; Alonova, M. V.; Ushakova, O. V.

    2013-12-01

    The morphological peculiarities of TS mitral valve of the heart of man in normal and abnormal spaced strings of the left ventricle and the study of their structural features depending on the location was studied. There are given the results of comparative statistics, correlation and fractal study population Mueller-matrix images (MMI) of healthy and abnormal (early forms that are not diagnosed by histological methods) BT normal and abnormally located tendon strings left ventricle of the human heart. Abnormalities in the structure of the wings, tendon strings (TS), mastoid muscle (MM) in inconsistencies elements and harmonized operation of all valve complex shown in the features of the polarization manifestations of it laser images.

  17. Electron microscopic and solution X-ray scattering observations on the structure of hepatitis B surface antigen

    Energy Technology Data Exchange (ETDEWEB)

    Aggerbeck, L.P.; Peterson, D.L.

    1985-02-01

    The structure of the small, spherical hepatitis B surface antigen was studied by negative staining, freeze-fracture and freeze-etching electron microscopy and solution X-ray scattering techniques. The protein appears to be organized at the surface into a small number of morphological subunits which display two- and threefold axes of symmetry. The mean particle size was 18.3 nm by negative staining and 19.6 nm by freeze-fracture electron microscopy. The diameter of the individual subunits was about 7.5 nm with an intersubunit distance of about 10.0 nm. The lipid is distributed more homogeneously. Some heterogeneity of the particle structure is apparent which may be due to a slightly variable lipid-protein composition or incomplete or defective particle formation.

  18. The interplay between tissue plasminogen activator domains and fibrin structures in the regulation of fibrinolysis: kinetic and microscopic studies.

    Science.gov (United States)

    Longstaff, Colin; Thelwell, Craig; Williams, Stella C; Silva, Marta M C G; Szabó, László; Kolev, Krasimir

    2011-01-13

    Regulation of tissue-type plasminogen activator (tPA) depends on fibrin binding and fibrin structure. tPA structure/function relationships were investigated in fibrin formed by high or low thrombin concentrations to produce a fine mesh and small pores, or thick fibers and coarse structure, respectively. Kinetics studies were performed to investigate plasminogen activation and fibrinolysis in the 2 types of fibrin, using wild-type tPA (F-G-K1-K2-P, F and K2 binding), K1K1-tPA (F-G-K1-K1-P, F binding), and delF-tPA (G-K1-K2-P, K2 binding). There was a trend of enzyme potency of tPA > K1K1-tPA > delF-tPA, highlighting the importance of the finger domain in regulating activity, but the differences were less apparent in fine fibrin. Fine fibrin was a better surface for plasminogen activation but more resistant to lysis. Scanning electron and confocal microscopy using orange fluorescent fibrin with green fluorescent protein-labeled tPA variants showed that tPA was strongly associated with agglomerates in coarse but not in fine fibrin. In later lytic stages, delF-tPA-green fluorescent protein diffused more rapidly through fibrin in contrast to full-length tPA, highlighting the importance of finger domain-agglomerate interactions. Thus, the regulation of fibrinolysis depends on the starting nature of fibrin fibers and complex dynamic interaction between tPA and fibrin structures that vary over time.

  19. Intrinsic point defects in zinc oxide. Modeling of structural, electronic, thermodynamic and kinetic properties

    Energy Technology Data Exchange (ETDEWEB)

    Erhart, P.

    2006-07-01

    The present dissertation deals with the modeling of zinc oxide on the atomic scale employing both quantum mechanical as well as atomistic methods. The first part describes quantum mechanical calculations based on density functional theory of intrinsic point defects in ZnO. To begin with, the geometric and electronic structure of vacancies and oxygen interstitials is explored. In equilibrium oxygen interstitials are found to adopt dumbbell and split interstitial configurations in positive and negative charge states, respectively. Semi-empirical self-interaction corrections allow to improve the agreement between the experimental and the calculated band structure significantly; errors due to the limited size of the supercells can be corrected by employing finite-size scaling. The effect of both band structure corrections and finite-size scaling on defect formation enthalpies and transition levels is explored. Finally, transition paths and barriers for the migration of zinc as well as oxygen vacancies and interstitials are determined. The results allow to interpret diffusion experiments and provide a consistent basis for developing models for device simulation. In the second part an interatomic potential for zinc oxide is derived. To this end, the Pontifix computer code is developed which allows to fit analytic bond-order potentials. The code is subsequently employed to obtain interatomic potentials for Zn-O, Zn-Zn, and O-O interactions. To demonstrate the applicability of the potentials, simulations on defect production by ion irradiation are carried out. (orig.)

  20. Structural asymmetry in the magnesium channel CorA points to sequential allosteric regulation.

    Science.gov (United States)

    Pfoh, Roland; Li, Angela; Chakrabarti, Nilmadhab; Payandeh, Jian; Pomès, Régis; Pai, Emil F

    2012-11-13

    Magnesium ions (Mg(2+)) are essential for life, but the mechanisms regulating their transport into and out of cells remain poorly understood. The CorA-Mrs2-Alr1 superfamily of Mg(2+) channels represents the most prevalent group of proteins enabling Mg(2+) ions to cross membranes. Thermotoga maritima CorA (TmCorA) is the only member of this protein family whose complete 3D fold is known. Here, we report the crystal structure of a mutant in the presence and absence of divalent ions and compare it with previous divalent ion-bound TmCorA structures. With Mg(2+) present, this structure shows binding of a hydrated Mg(2+) ion to the periplasmic Gly-Met-Asn (GMN) motif, revealing clues of ion selectivity in this unique channel family. In the absence of Mg(2+), TmCorA displays an unexpected asymmetric conformation caused by radial and lateral tilts of protomers that leads to bending of the central, pore-lining helix. Molecular dynamics simulations support these movements, including a bell-like deflection. Mass spectrometric analysis confirms that major proteolytic cleavage occurs within a region that is selectively exposed by such a bell-like bending motion. Our results point to a sequential allosteric model of regulation, where intracellular Mg(2+) binding locks TmCorA in a symmetric, transport-incompetent conformation and loss of intracellular Mg(2+) causes an asymmetric, potentially influx-competent conformation of the channel.

  1. What do we know about the structure of human thymic Hassall's corpuscles? A histochemical, immunohistochemical, and electron microscopic study.

    Science.gov (United States)

    Mikušová, Renáta; Mešťanová, Veronika; Polák, Štefan; Varga, Ivan

    2017-05-01

    Hassall's corpuscles are the most prominent structures in the human thymus. However, relatively few analyses have been performed to determine their function and cellular origins during development. In this study, we evaluated the cellular microenvironment of human thymic Hassall's corpuscles using histochemistry, immunohistochemistry, and transmission electron microscopy. We examined 95 human thymic tissue samples, which were perioperatively obtained from children undergoing cardiac surgery. To characterize the complex cellular microenvironment of human thymic corpuscles, we used a panel of 14 different antibodies to identify discrete cell types. We also utilized various histochemical methods (PAS reaction, alcian blue staining, alkaline phosphatase and acid phosphatase activity staining, von Kossa staining of calcified particles) and transmission electron microscopy to visualize these structures. Considerable variation in the sizes, shapes, and numbers of Hassall's corpuscles was observed, even amongst children of the same age. Inside the largest Hassall's corpuscles, cystic dilatation with an accumulation of cellular debris was found. These morphological observations might be associated with disruptions in the formation, migration, or differentiation of cardiac neural crest cells, which are essential for heart and thymus development. Immunohistochemical staining and electron microscopy revealed that Hassall's corpuscles resemble other types of stratified squamous epithelia. Most Hassall's corpuscles are heterocellular, consisting of thymic epithelial cells, macrophages, interdigitating dendritic cells, myoid cells, and, occasionally, mast cells and lymphocytes. To explore the potential functions of Hassall's corpuscles, we found that the concentrations of B-lymphocytes and BCL2-positive lymphocytes suggested a role in regulation of lymphopoiesis. We also found that these structures do not originate from the perivascular epithelium as previously proposed, nor

  2. Motif based hierarchical random graphs: structural properties and critical points of an Ising model

    CERN Document Server

    Kotorowicz, M; 10.5488/CMP.14.13801

    2011-01-01

    A class of random graphs is introduced and studied. The graphs are constructed in an algorithmic way from five motifs which were found in [Milo R., Shen-Orr S., Itzkovitz S., Kashtan N., Chklovskii D., Alon U., Science, 2002, 298, 824-827]. The construction scheme resembles that used in [Hinczewski M., A. Nihat Berker, Phys. Rev. E, 2006, 73, 066126], according to which the short-range bonds are non-random, whereas the long-range bonds appear independently with the same probability. A number of structural properties of the graphs have been described, among which there are degree distributions, clustering, amenability, small-world property. For one of the motifs, the critical point of the Ising model defined on the corresponding graph has been studied.

  3. Electronic structure of point defects in rutile TiO[sub 2

    Energy Technology Data Exchange (ETDEWEB)

    Yu, N.; Halley, J.W. (School of Physics and Astronomy, University of Minnesota, Minneapolis, Minnesota 55455 (United States))

    1995-02-15

    We present results of a computation of the electronic structure of point defects in reduced rutile using a semiempirical self-consistent method. Calculations on models of both titanium interstitials and oxygen vacancies are reported. We find donor levels in the range 0.7--0.8 eV for isolated defects in each case. The defects have an effective screening radius of less than 5 A. We also report results on clusters of defects. These suggest that a model in which the screening charges of multiple defects are added would be quite accurate for systems with multiple defects. Comparison of our results with infrared experiments suggests the presence of defect clustering in nearly stoichiometric rutile, as proposed earlier on the basis of other experiments.

  4. Factorization of 3-point static structure functions in 3D Yukawa liquids

    CERN Document Server

    Magyar, Peter; Kalman, Gabor J; Golden, Kenneth I; Donko, Zoltan

    2016-01-01

    In many-body systems the convolution approximation states that the 3-point static structure function, $S^{(3)}(\\textbf{k}_{1},\\textbf{k}_{2})$, can approximately be "factorized" in terms of the 2-point counterpart, $S^{(2)}(\\textbf{k}_{1})$. We investigate the validity of this approximation in 3-dimensional strongly-coupled Yukawa liquids: the factorization is tested for specific arrangements of the wave vectors $\\textbf{k}_{1}$ and $\\textbf{k}_{2}$, with molecular dynamics simulations. With the increase of the coupling parameter we find a breakdown of factorization, of which a notable example is the appearance of negative values of $S^{(3)}(\\textbf{k}_{1},\\textbf{k}_{2})$, whereas the approximate factorized form is restricted to positive values. These negative values -- based on the quadratic Fluctuation-Dissipation Theorem -- imply that the quadratic part of the density response of the system changes sign with wave number. Our simulations that incorporate an external potential energy perturbation clearly co...

  5. Experimental assessment of post-processed kinematic Precise Point Positioning method for structural health monitoring

    Directory of Open Access Journals (Sweden)

    Cemal Ozer Yigit

    2016-01-01

    Full Text Available Monitoring the response of engineering structures, such as tall buildings, tower and large-scale bridges, under severe loading conditions, such as strong earthquake or wind storm, is an important requirement to verify their design and construction and to evaluate structural condition and reliability. In the last two decades, high-rate real-time or post-processed kinematic differential Global Positioning System (DGPS has been widely used in dynamic displacement measurements of civil engineering structures. In recent years, interest has increased for Precise Point Positioning (PPP due to its capability to generate positioning solutions as accurate as DGPS. In this study, the potential of post-processed kinematic PPP in terms of monitoring dynamic displacement response of a structure has been explored based on free damped oscillation events obtained from a model structure, which is able to vibrate in the fundamental and higher modes of vibration. A number of experiments have been carried out and five events, each of which is different character, have been selected to compare PPP results with DPGS results in the time and frequency domain. The results clearly demonstrate that the PPP method, like the DGPS method, offers great potential for the measurement of horizontal and vertical dynamic movement of structures. The impact of a short period (one minute of observation length on the result of the kinematic PPP method was also investigated in terms of sensing the dynamic movement of a structure. Twenty selected one-minute data-sets extracted from a one-hour original data-set were processed by Canadian spatial reference system PPP and each one-minute PPP solution was compared with the corresponding segment obtained from the one-hour PPP solution. The results show that the one-minute PPP solution is able to extract the fundamental natural frequency of the oscillation in the horizontal and vertical component just like the one-hour PPP solution after the

  6. Modeling of cerebral oxygen transport based on in vivo microscopic imaging of microvascular network structure, blood flow and oxygenation

    Directory of Open Access Journals (Sweden)

    Louis Gagnon

    2016-08-01

    Full Text Available Oxygen is delivered to brain tissue by a dense network of microvessels, which actively control cerebral blood flow (CBF through vasodilation and contraction in response to changing levels of neural activity. Understanding these network-level processes is immediately relevant for (1 interpretation of functional Magnetic Resonance Imaging (fMRI signals, and (2 investigation of neurological diseases in which a deterioration of neurovascular and neuro-metabolic physiology contributes to motor and cognitive decline. Experimental data on the structure, flow and oxygen levels of microvascular networks are needed, together with theoretical methods to integrate this information and predict physiologically relevant properties that are not directly measurable. Recent progress in optical imaging technologies for high-resolution in vivo measurement of the cerebral microvascular architecture, blood flow, and oxygenation enables construction of detailed computational models of cerebral hemodynamics and oxygen transport based on realistic three-dimensional microvascular networks. In this article, we review state-of-the-art optical microscopy technologies for quantitative in vivo imaging of cerebral microvascular structure, blood flow and oxygenation, and theoretical methods that utilize such data to generate spatially resolved models for blood flow and oxygen transport. These bottom-up models are essential for the understanding of the processes governing brain oxygenation in normal and disease states and for eventual translation of the lessons learned from animal studies to humans.

  7. Role of biaxial strain and microscopic ordering for structural and electronic properties of InxGa1 -xN

    Science.gov (United States)

    Cui, Ying; Lee, Sangheon; Freysoldt, Christoph; Neugebauer, Jörg

    2015-08-01

    The structural and electronic properties of InxGa1 -xN alloys are studied as a function of c -plane biaxial strain and In ordering by density functional theory with the Heyd-Scuseria-Ernzerhof (HSE) hybrid functional. A nonlinear variation of the c lattice parameter with In content is observed in biaxial strain and should be taken into account when deducing In content from interplanar distances. From compressive to tensile strain, the character of the top valence-band state changes, leading to a nonlinear variation of the band gap in InxGa1 -xN . Interestingly, the well-known bowing of the InxGa1 -xN band gap is largely removed for alloys grown strictly coherently on GaN, while the actual values for band gaps at x minor role for lattice constants but may induce changes of the band gap up to 0.15 eV.

  8. Differences in compact bone tissue microscopic structure between adult humans (Homo sapiens) and Assam macaques (Macaca assamensis).

    Science.gov (United States)

    Nganvongpanit, Korakot; Phatsara, Manussabhorn; Settakorn, Jongkolnee; Mahakkanukrauh, Pasuk

    2015-09-01

    This study investigated the osteon structure of adult humans and Assam macaques, which served as a nonhuman primate model, to find an adequate key for species identification. Samples of compact bone from humans (n=5) and Assam macaques (n=5) - including humerus (n=20), radius (n=20), ulna (n=20), femur (n=20), tibia (n=20) and fibula (n=20) - were processed using conventional histological techniques. 100 secondary osteons from each sample were evaluated under light microscopy. Parameter measurements included: diameter, perimeter and area of Haversian canal and osteon; distance between centers of Haversian canals; and ratio between diameter of Haversian canal and osteon. Four parameters, including diameters and areas of Haversian canal and osteon, demonstrated significantly higher (P<0.05) values in humans than in Assam macaques. Therefore, compact bone microstructure could thus be used as a potential tool to differentiate human and nonhuman primates.

  9. Growth parameter effect on the electronic structure of the quantum points in InGaAs/GaAs heterostructures

    CERN Document Server

    Tonkikh, A A; Polyakov, N K; Tsyrlin, G E; Volovik, B V; Cherkashin, N; Ustinov, V M

    2002-01-01

    The optical and structural properties of the heterostructures with the quantum points in the InAs/GaAs system in the InGaAs solid solution are studied with application of various methodologies for sputtering from the molecular beams: the molecular-beam epitaxy submonolayer migration stimulated epitaxy. The photoluminescence spectra maxima in the studied samples are within the interval of 1.18-1.32 mu m. The growth parameters effect on the quantum points electron structure is identified

  10. Fast magnetoacoustic waves in a fan structure above the coronal magnetic null point

    CERN Document Server

    Meszarosova, H; Karlicky, M; Madsen, F R H; Sawant, H S

    2013-01-01

    We analyze the 26 November 2005 solar radio event observed interferometrically at frequencies of 244 and 611 MHz by the Giant Metrewave Radio Telescope (GMRT) in Pune, India. These observations are used to make interferometric maps of the event at both frequencies with the time cadence of 1 s from 06:50 to 07:12 UT. These maps reveal several radio sources. The light curves of these sources show that only two sources at 244 MHz and 611 MHz are well correlated in time. The EUV flare is more localized with flare loops located rather away from the radio sources. Using the SoHO/MDI observations and potential magnetic field extrapolation we demonstrate that both the correlated sources are located in the fan structure of magnetic field lines starting from a coronal magnetic null point. Wavelet analysis of the light curves of the radio sources detects tadpoles with periods in the range P = 10-83 s. These wavelet tadpoles indicate the presence of fast magnetoacoustic waves that propagate in the fan structure of the co...

  11. Characteristics of X-point Lobe Structures in Single-Null Discharges on MAST

    CERN Document Server

    Harrison, J R; Chapman, I T; Cahyna, P; Liu, Yueqiang; Nardon, E; Thornton, A J

    2013-01-01

    Lobe structures due to the application of resonant magnetic perturbations (RMPs) have been observed using wide-angle imaging of light from He1+ ions in the vicinity of the lower X-point in MAST. The data presented are from lower single-null discharges where RMPs of toroidal mode number, n, of 4 and 6 were applied. It has been found that, above a threshold value, the lobe structures extend radially, linearly with the coil current, both in L-mode and H-mode. It is observed that after the application of the RMP, as the toroidal rotation in the confined plasma decreases, the lobes extend radially, suggesting the plasma is less effectively screening the RMP field. Comparing the imaging data with results from vacuum modelling shows that this technique can accurately predict the number and poloidal location of the lobes, but over-estimates their radial extent. More accurate estimates of the extent of the lobes can be made by accounting for plasma screening of the RMP field. Qualitative agreement between simulation a...

  12. Structural and Optical Properties of Point Defects in α-SiO2 Cluster

    Science.gov (United States)

    Liu, Meng; Lu, Peng-Fei; Yang, Yang; Wu, Li-Yuan; Su, Rui; Chen, Jun

    2015-08-01

    First-principles methods based on the density functional theory (DFT) are used in order to calculate the structural and optical properties of α-SiO2 cluster with the non-bridging oxygen hole centers (NBOHC) and NBOHC-E' defects. We clarify the stable structure of the NBOHC-E' point defects for the first time using the functional B3LYP, which is also tested to investigate the influence of electronic properties. The calculation is carried out for cluster configurations extracted from supercell. The results of optical absorption peak for Si2O7H6 and Si5O16H12 with NBOHC-E' defects are found at 2.66 eV, which is higher than the often observed OA peak at 2.0 eV for the NBOHC defect in α-SiO2. The overall absorption spectra are in qualitative agreement with the experiment. Supported by the National Basic Research Program of China (973 Program) under Grant No. 2014CB643900, the Open Fund of IPOC (BUPT), the Open Program of State Key Laboratory of Functional Materials for Informatics, and the National Natural Science Foundation of China under Grant No. 61440061

  13. Using Interior Point Method Optimization Techniques to Improve 2- and 3-Dimensional Models of Earth Structures

    Science.gov (United States)

    Zamora, A.; Gutierrez, A. E.; Velasco, A. A.

    2014-12-01

    2- and 3-Dimensional models obtained from the inversion of geophysical data are widely used to represent the structural composition of the Earth and to constrain independent models obtained from other geological data (e.g. core samples, seismic surveys, etc.). However, inverse modeling of gravity data presents a very unstable and ill-posed mathematical problem, given that solutions are non-unique and small changes in parameters (position and density contrast of an anomalous body) can highly impact the resulting model. Through the implementation of an interior-point method constrained optimization technique, we improve the 2-D and 3-D models of Earth structures representing known density contrasts mapping anomalous bodies in uniform regions and boundaries between layers in layered environments. The proposed techniques are applied to synthetic data and gravitational data obtained from the Rio Grande Rift and the Cooper Flat Mine region located in Sierra County, New Mexico. Specifically, we improve the 2- and 3-D Earth models by getting rid of unacceptable solutions (those that do not satisfy the required constraints or are geologically unfeasible) given the reduction of the solution space.

  14. Relative diversity and community structure analysis of rumen protozoa according to T-RFLP and microscopic methods.

    Science.gov (United States)

    Tymensen, Lisa; Barkley, Cindy; McAllister, Tim A

    2012-01-01

    Protozoa are common inhabitants of the rumen where they play roles in host nutrition and methanogenesis. Knowledge of how changes in the composition of protozoa communities affect these processes is limited in part due to a lack of efficient methods for protozoa community analysis. In this study, a terminal-restriction fragment length polymorphism (T-RFLP) assay targeting the 18S rRNA gene was developed for comparative analysis of rumen protozoa communities. Comparison of diversity and structure of protozoa communities from hay-fed versus silage/grain-fed cattle via T-RFLP analysis yielded similar overall results to microscopy analysis. According to both methods, Entodinium spp. were more abundant in the silage/grain-fed cattle and protozoa diversity (as calculated using the Shannon index) was higher for the hay-fed cattle due to greater species evenness. Type B protozoa were more prevalent in the hay-fed cattle, whereas Type A protozoa were more prevalent in the silage/grain-fed cattle. Analysis of similarity (ANOSIM) indicated that the protozoa communities from hay-fed and silage/grain-fed cattle were different, and multivariate analysis indicated that pen mates (i.e., cattle fed the same diet and housed together) tended to have similar protozoa communities types. In summary, we present a T-RFLP method for analyzing rumen protozoa communities which complements traditional microscopy approaches but has the advantage of being amenable to high-throughput. Copyright © 2011. Published by Elsevier B.V.

  15. Preffered Competence Structure of University Graduates: Russian Employers‘ Point of View

    Directory of Open Access Journals (Sweden)

    Anna Svirina

    2016-05-01

    Full Text Available Purpose of the article: The article examines preffered structure of competences from Russian employers’s point of view in order to provide universities with the knowledge on how graduates‘ skills are viewed by the main customers. Methodology/methods: The article is based on factor analysis of competences which are derived from the questionnaire which was distributed to Russian enterprises (mainly meduim sized manufacturing enterprises. The questionnaires were gathered from management of the companies, and evaluated by factor analysis using varimax method. Significance of the findings is confirmed by the level of Cronbach alpha. Scientific aim: The scientific aim of the article is to define the main competences of university graduates as they are seen by employers. The paper also aims to define whether the structure of preffered competences differs alone the timeline, i.e. do employers evaluate their requirements in past, present and future differently. Findings: In the article it is revealed that preferred structure of competences university graduates should possess evolves overtime, and that employers have lower understanding of their needs and requirments for the future. Second, it appeared that the most signigicant graduates‘ competences are systemic thinking and professional skills, but the other factors may only be considered moderator of these skills in future. Finally, multidisciplinary skills appear to gain significance along the timeline of the study, so employers are looking for multidisciplinary skills for the future as a response for existing high turbulence. Conclusions: The main limitations of the study are small sample and focus on mid-Russian meduim enterprises, which are mainly manufacturing. The study has distinct applications to practice by defining the most significant graduates‘ competences from employers‘ perspective, and to theory by proposing evolution paths for competence significance.

  16. Science 101: How Does an Electron Microscope Work?

    Science.gov (United States)

    Robertson, Bill

    2013-01-01

    Contrary to popular opinion, electron microscopes are not used to look at electrons. They are used to look for structure in things that are too small to observe with an optical microscope, or to obtain images that are magnified much more than is obtainable with an optical microscope. To understand how electron microscopes work, it will help to go…

  17. Science 101: How Does an Electron Microscope Work?

    Science.gov (United States)

    Robertson, Bill

    2013-01-01

    Contrary to popular opinion, electron microscopes are not used to look at electrons. They are used to look for structure in things that are too small to observe with an optical microscope, or to obtain images that are magnified much more than is obtainable with an optical microscope. To understand how electron microscopes work, it will help to go…

  18. Hominid cranial bone structure: a histological study of Omo 1 specimens from Ethiopia using different microscopic techniques.

    Science.gov (United States)

    Bartsiokas, Antonis

    2002-05-01

    The microstructure of a hominid cranial vault has not previously been studied to determine its tissue histology, and differences in comparison with that of modern humans. We selected the parietals of Omo-Kibish 1, regarded as one of the oldest (about 130,000 years old) anatomically modern humans, and Omo 1 (Howell), which is a very recent human (about 2,000 years old)-both from the same area of Ethiopia. A combination of macrophotography, polarizing microscopy in the incident and transmission illumination mode, and confocal laser scanning microscopy (CLSM) was employed to examine thin sections, as well as polished and unpolished block faces of unembedded bone fragments, to minimize specimen destruction as much as possible. The methods enabled remarkably detailed information on bone microstructure and remodeling to be gleaned from tiny fragments of bone. The best method for examining fossilized human bones was shown to be that of incident light microscopy, which was the least destructive while producing the most amount of information. Unless the above methods are used, bone-filling minerals, such as calcite, can cause erroneous estimations of bone thickness, as observations with the naked eye or even a magnifying glass cannot determine the limit between the cortex and the diploe. This is particularly important for sciences such as paleoanthropology, in which, for instance, a thick cranial bone of Homo erectus may be confused with a pathological one of H. sapiens and vice versa. Cross sections of parietal bones revealed differences between Omo-Kibish 1 and Omo 1 (Howell) in diploic histology and in the relative thickness between the cortex and diploe, with the former specimen having an H. erectus ratio despite its H. sapiens gross anatomy. Omo-Kibish 1 may still retain some affinities with H. erectus despite its being classified as H. sapiens. Newly described histological structures, such as the reverse type II osteons, the multicanalled osteons, and the

  19. The microscopic structure of charge density waves in underdoped YBa2Cu3O6.54 revealed by X-ray diffraction

    Science.gov (United States)

    Forgan, E. M.; Blackburn, E.; Holmes, A. T.; Briffa, A. K. R.; Chang, J.; Bouchenoire, L.; Brown, S. D.; Liang, Ruixing; Bonn, D.; Hardy, W. N.; Christensen, N. B.; Zimmermann, M. V.; Hücker, M.; Hayden, S. M.

    2015-12-01

    Charge density wave (CDW) order appears throughout the underdoped high-temperature cuprate superconductors, but the underlying symmetry breaking and the origin of the CDW remain unclear. We use X-ray diffraction to determine the microscopic structure of the CDWs in an archetypical cuprate YBa2Cu3O6.54 at its superconducting transition temperature ~60 K. We find that the CDWs in this material break the mirror symmetry of the CuO2 bilayers. The ionic displacements in the CDWs have two components, which are perpendicular and parallel to the CuO2 planes, and are out of phase with each other. The planar oxygen atoms have the largest displacements, perpendicular to the CuO2 planes. Our results allow many electronic properties of the underdoped cuprates to be understood. For instance, the CDWs will lead to local variations in the electronic structure, giving an explicit explanation of density-wave states with broken symmetry observed in scanning tunnelling microscopy and soft X-ray measurements.

  20. The microscopic structure of charge density waves in underdoped YBa2Cu3O6.54 revealed by X-ray diffraction.

    Science.gov (United States)

    Forgan, E M; Blackburn, E; Holmes, A T; Briffa, A K R; Chang, J; Bouchenoire, L; Brown, S D; Liang, Ruixing; Bonn, D; Hardy, W N; Christensen, N B; Zimmermann, M V; Hücker, M; Hayden, S M

    2015-12-09

    Charge density wave (CDW) order appears throughout the underdoped high-temperature cuprate superconductors, but the underlying symmetry breaking and the origin of the CDW remain unclear. We use X-ray diffraction to determine the microscopic structure of the CDWs in an archetypical cuprate YBa2Cu3O6.54 at its superconducting transition temperature ∼ 60 K. We find that the CDWs in this material break the mirror symmetry of the CuO2 bilayers. The ionic displacements in the CDWs have two components, which are perpendicular and parallel to the CuO2 planes, and are out of phase with each other. The planar oxygen atoms have the largest displacements, perpendicular to the CuO2 planes. Our results allow many electronic properties of the underdoped cuprates to be understood. For instance, the CDWs will lead to local variations in the electronic structure, giving an explicit explanation of density-wave states with broken symmetry observed in scanning tunnelling microscopy and soft X-ray measurements.

  1. Structural development of an Archean Orogen, Western Point Lake, Northwest Territories

    Science.gov (United States)

    Kusky, Timothy M.

    1991-08-01

    The Point Lake orogen in the central Archean Slave Province of northwestern Canada preserves more than 10 km of structural relief through an eroded antiformal thrust stack and deeper anastomosing midcrustal mylonites. Fault restoration along a 25 km long transect requires a minimum of 69 km slip and 53 km horizontal shortening. In the western part of the orogen the basal decollement places mafic plutonic/volcanic rocks over an ancient tonalitic gneiss complex. Ten kilometers to the east in the Keskarrah Bay area, slices of gneiss unroofed on brittle thrusts shed molasse into several submerged basins. Conglomerates and associated thinly bedded sedimentary rocks are interpreted as channel, levee, and overbank facies of this thrust-related sedimentary fan system. The synorogenic erosion surface at the base of the conglomerate truncates premetamorphic or early metamorphic thrust faults formed during foreland propagation, while other thrusts related to hinterland-progressing imbrication displace this unconformity. Tightening of synorogenic depositional troughs resulted in the conglomerates' present localization in synclines to the west of associated thrust faults and steepening of structural dips. Eastern parts of the orogen consist of isoclinally folded graywackes composed largely of Mutti and Ricci-Lucchi turbidite facies B, C, and D, interpreted as submarine fan deposits eroded from a distant volcanic arc. Thrust faults in the metasedimentary terrane include highly disrupted slate horizons with meter-scale duplex structures, and recrystallized calcmylonites exhibiting sheath folds and boudin trains with very large interboudin distances. The sequence of fabric development and the overall geometry of this metasedimentary terrane strongly resembles younger forearc accretionary prisms. Conditions of deformation along the thrusts parallel the regional metamorphic zonation: amphibolite facies in the basal decollement through greenschist facies shear zones to cataclastic

  2. Microscopic origin of magnetoresistance

    Directory of Open Access Journals (Sweden)

    Christian Heiliger

    2006-11-01

    Full Text Available Tunneling magnetoresistance is one of the basic effects of spintronics with the potential for applications in sensors and IT, where the spin degree of freedom of electrons is exploited. Successful application requires control of the materials and processes involved on the atomic scale. To support experimental developments, predict new materials, and optimize the effect, first-principle electronic structure calculations based on density functional theory are the most powerful tool. The method gives an insight into the microscopic origin of spin-dependent tunneling. The main components of a planar tunnel junction – barrier, leads, and their interface – and their specific role for tunneling magnetoresistance are discussed for one of the standard systems, Fe/MgO/Fe.

  3. Quantization and anomalous structures in the conductance of Si/SiGe quantum point contacts

    Science.gov (United States)

    von Pock, J. F.; Salloch, D.; Qiao, G.; Wieser, U.; Hackbarth, T.; Kunze, U.

    2016-04-01

    Quantum point contacts (QPCs) are fabricated on modulation-doped Si/SiGe heterostructures and ballistic transport is studied at low temperatures. We observe quantized conductance with subband separations up to 4 meV and anomalies in the first conductance plateau at 4e2/h. At a temperature of T = 22 mK in the linear transport regime, a weak anomalous kink structure arises close to 0.5(4e2/h), which develops into a distinct plateau-like structure as temperature is raised up to T = 4 K. Under magnetic field parallel to the wire up to B = 14 T, the anomaly evolves into the Zeeman spin-split level at 0.5(4e2/h), resembling the "0.7 anomaly" in GaAs/AlGaAs QPCs. Additionally, a zero-bias anomaly (ZBA) is observed in nonlinear transport spectroscopy. At T = 22 mK, a parallel magnetic field splits the ZBA peak up into two peaks. At B = 0, elevated temperatures lead to similar splitting, which differs from the behavior of ZBAs in GaAs/AlGaAs QPCs. Under finite dc bias, the differential resistance exhibits additional plateaus approximately at 0.8(4e2/h) and 0.2(4e2/h) known as "0.85 anomaly" and "0.25 anomaly" in GaAs/AlGaAs QPCs. Unlike the first regular plateau at 4e2/h, the 0.2(4e2/h) plateau is insensitive to dc bias voltage up to at least VDS = 80 mV, in-plane magnetic fields up to B = 15 T, and to elevated temperatures up to T = 25 K. We interpret this effect as due to pinching off one of the reservoirs close to the QPC. We do not see any indication of lifting of the valley degeneracy in our samples.

  4. Predicting Flash Point of Organosilicon Compounds Using Quantitative Structure Activity Relationship Approach

    Directory of Open Access Journals (Sweden)

    Chen-Peng Chen

    2014-01-01

    Full Text Available The flash point (FP of a compound is the primary property used in the assessment of fire hazards for flammable liquids and is amongst the crucial information that people handling flammable liquids must possess as far as industrial safety is concerned. In this work, the FPs of 236 organosilicon compounds were collected and used to construct a quantitative structure activity relationship (QSAR model for predicting their FPs. The CODESSA PRO software was adopted to calculate the required molecular descriptors, and 350 molecular descriptors were developed for each compound. A modified stepwise regression algorithm was applied to choose descriptors that were highly correlated with the FP of organosilicon compounds. The proposed model was a linear regression model consisting of six descriptors. This 6-descriptor model gave an R2 value of 0.9174, QLOO2 value of 0.9106, and Q2 value of 0.8989. The average fitting error and the average predictive error were found to be of 10.34 K and 11.22 K, respectively, and the average fitting error in percentage and the average predictive error in percentage were found to be of 3.30 and 3.60%, respectively. Compared with the known reproducibility of FP measurement using standard test method, these predicted results were of a satisfactory precision.

  5. The analytic structure of conformal blocks and the generalized Wilson-Fisher fixed points

    Science.gov (United States)

    Gliozzi, Ferdinando; Guerrieri, Andrea L.; Petkou, Anastasios C.; Wen, Congkao

    2017-04-01

    We describe in detail the method used in our previous work arXiv:1611.10344 https://arxiv.org/abs/1611.10344 to study the Wilson-Fisher critical points nearby generalized free CFTs, exploiting the analytic structure of conformal blocks as functions of the conformal dimension of the exchanged operator. Our method is equivalent to the mechanism of conformal multiplet recombination set up by null states. We compute, to the first non-trivial order in the ɛ-expansion, the anomalous dimensions and the OPE coefficients of infinite classes of scalar local operators using just CFT data. We study single-scalar and O( N)-invariant theories, as well as theories with multiple deformations. When available we agree with older results, but we also produce a wealth of new ones. Unitarity and crossing symmetry are not used in our approach and we are able to apply our method to non-unitary theories as well. Some implications of our results for the study of the non-unitary theories containing partially conserved higher-spin currents are briefly mentioned.

  6. The effect of point mutations on structure and mechanical properties of collagen-like fibril: A molecular dynamics study

    Energy Technology Data Exchange (ETDEWEB)

    Marlowe, Ashley E.; Singh, Abhishek; Yingling, Yaroslava G., E-mail: yara_yingling@ncsu.edu

    2012-12-01

    Understanding sequence dependent mechanical and structural properties of collagen fibrils is important for the development of artificial biomaterials for medical and nanotechnological applications. Moreover, point mutations are behind many collagen associated diseases, including Osteogenesis Imperfecta (OI). We conducted a combination of classical and steered atomistic molecular dynamics simulations to examine the effect of point mutations on structure and mechanical properties of short collagen fibrils which include mutations of glycine to alanine, aspartic acid, cysteine, and serine or mutations of hydroxyproline to arginine, asparagine, glutamine, and lysine. We found that all mutations disrupt structure and reduce strength of the collagen fibrils, which may affect the hierarchical packing of the fibrils. The glycine mutations were more detrimental to mechanical strength of the fibrils (WT > Ala > Ser > Cys > Asp) than that of hydroxyproline (WT > Arg > Gln > Asn > Lys). The clinical outcome for glycine mutations agrees well with the trend in reduction of fibril's tensile strength predicted by our simulations. Overall, our results suggest that the reduction in mechanical properties of collagen fibrils may be used to predict the clinical outcome of mutations. Highlights: Black-Right-Pointing-Pointer All mutations disrupt structure and bonding pattern and reduce strength of the collagen fibrils. Black-Right-Pointing-Pointer Gly based mutations are worst to mechanical integrity of fibrils than that of Hyp. Black-Right-Pointing-Pointer Lys and Arg mutations most dramatically destabilize collagen fibril properties. Black-Right-Pointing-Pointer Clinical outcome of mutations may be related to the reduced mechanical properties of fibrils.

  7. Simulations of optical microscope images

    Science.gov (United States)

    Germer, Thomas A.; Marx, Egon

    2006-03-01

    The resolution of an optical microscope is limited by the optical wavelengths used. However, there is no fundamental limit to the sensitivity of a microscope to small differences in any of a feature's dimensions. That is, those limits are determined by such things as the sensitivity of the detector array, the quality of the optical system, and the stability of the light source. The potential for using this nearly unbounded sensitivity has sparked interest in extending optical microscopy to the characterization of sub-wavelength structures created by photolithography and using that characterization for process control. In this paper, an analysis of the imaging of a semiconductor grating structure with an optical microscope will be presented. The analysis includes the effects of partial coherence in the illumination system, aberrations of both the illumination and the collection optics, non-uniformities in the illumination, and polarization. It can thus model just about any illumination configuration imaginable, including Koehler illumination, focused (confocal) illumination, or dark-field illumination. By propagating Jones matrices throughout the system, polarization control at the back focal planes of both illumination and collection can be investigated. Given a detailed characterization of the microscope (including aberrations), images can be calculated and compared to real data, allowing details of the grating structure to be determined, in a manner similar to that found in scatterometry.

  8. Nanometer scale correlation of optical and structural properties of individual InGaN/GaN nanorods by scanning transmission electron microscope cathodoluminescence

    Energy Technology Data Exchange (ETDEWEB)

    Mueller, Marcus; Schmidt, Gordon; Veit, Peter; Petzold, Silke; Bertram, Frank; Christen, Juergen [Institute of Experimental Physics, Otto-von-Guericke-University Magdeburg (Germany); Albert, Steven; Bengoechea-Encabo, Ana Maria; Sanchez-Garcia, Miguel Angel; Calleja, Enrique [ISOM e Departamento de Ingenieria Electronica, Universidad Politecnica de Madrid (Spain)

    2013-07-01

    A potential benefit of nanorods as light emitters, aside from their very high crystal quality, relies on better light extraction efficiency as compared to thin films, because of the high surface to volume ratio. In this study we present a direct nano-scale correlation of the optical properties with the actual crystalline structure of ordered InGaN/GaN nanorods using low temperature cathodoluminescence spectroscopy in a scanning transmission electron microscope (STEM-CL). Direct comparison of the high-angle annular dark field image with the simultaneously recorded panchromatic CL mapping at 15 K reveals a weak luminescence from the bottom GaN layer. We observe the highest CL intensity in the middle of the InGaN region. The spectral position of the InGaN emission shifts continuously red from the GaN/InGaN interface (λ=409 nm) to the NR top (λ=446 nm) due to lattice pulling effects and InGaN partial decomposition. Additionally, optical active basal stacking faults in the GaN layer emitting at 366 nm can be found.

  9. Microscopic Phase-field Simulation of Competition Mechanism Between L12 and D022 Structure in Ni-Cr-Al Alloy

    Institute of Scientific and Technical Information of China (English)

    Zhong CHU; Zheng CHEN; Yongxin WANG; Yanli LU; Yongsheng LI

    2006-01-01

    Simulations are performed on temporal evolution of atom morphology and ordering parameters of Ni-14.5Cr-16.5 Al alloy during early precipitation process at different temperatures based on microscopic phase-field theory; the relationship between precipitation sequence and mechanism of L12 and D022 structure and precipitation temperature are illuminated. The nonstoichiometric ordered L12 phases appear first with congruent ordering+spinodal decomposition mechanism which is then followed by precipitation of D022 phases at ordering domain boundaries of L12 phases by spinodal decomposition mechanism at 1073 K and 1223 K. The nonstoichiometric L12 phases transform to stoichiometric ordering phases gradually. The incubation period of L12 and D022 phases is shorter at 1073 K than that 1223 K, and growth speed is higher at 1073 K. At 1373 K, L12 and D022 phases appear simultaneously by non-classical nucleation and growth mechanism. After that the particles of D022 phases diminish and disappear gradually; L12 phases grow and single L12 phases are remained at last.

  10. Cryoelectron Microscopic Structures of Eukaryotic Translation Termination Complexes Containing eRF1-eRF3 or eRF1-ABCE1

    Directory of Open Access Journals (Sweden)

    Anne Preis

    2014-07-01

    Full Text Available Termination and ribosome recycling are essential processes in translation. In eukaryotes, a stop codon in the ribosomal A site is decoded by a ternary complex consisting of release factors eRF1 and guanosine triphosphate (GTP-bound eRF3. After GTP hydrolysis, eRF3 dissociates, and ABCE1 can bind to eRF1-loaded ribosomes to stimulate peptide release and ribosomal subunit dissociation. Here, we present cryoelectron microscopic (cryo-EM structures of a pretermination complex containing eRF1-eRF3 and a termination/prerecycling complex containing eRF1-ABCE1. eRF1 undergoes drastic conformational changes: its central domain harboring the catalytically important GGQ loop is either packed against eRF3 or swung toward the peptidyl transferase center when bound to ABCE1. Additionally, in complex with eRF3, the N-terminal domain of eRF1 positions the conserved NIKS motif proximal to the stop codon, supporting its suggested role in decoding, yet it appears to be delocalized in the presence of ABCE1. These results suggest that stop codon decoding and peptide release can be uncoupled during termination.

  11. Study of the Protective Effects of Quince (Cydonia Oblonga Leaf Extract on the Histologic Structure and Microscopic Indices of Spermatogenesis Following Induction of Diabetes in Adult Rats

    Directory of Open Access Journals (Sweden)

    Davoud Kianifard

    2016-11-01

    Full Text Available Various types of infertility are associated with uncontrolled hyperglycemia. Development of oxidative stress is one the most important factors in the alteration of spermatogenesis in diabetic conditions. Testicular tissue is one of the sensitive organs to environmental damages. Natural antioxidants are considered as preventive and therapeutic strategies in cases of diabetic side effects. Cydonia oblonga leaf extract contains natural antioxidant compounds. The flavonoid compounds of the quince have strong antioxidant and immune-regulatory effects. According to little data about the protective effects of cydonia oblonga leaf extract on the structural alterations of testicular tissue following induction of diabetes, in this study protective aspects of this extract on the diabetic reproductive alteration were evaluated. Cydonia oblonga leaf extract was gavaged in two doses of 250 and 500 mg/kg. The number of 56 adult rats were divided into seven groups consisted of control, extract treated control groups, diabetic, extract treated diabetic groups and metformin treated diabetic group. Eight weeks after induction of diabetes, the body and testicular weight were measured and microscopic and histomorphometric studies were done on tissue samples. In control groups, the administration of extract was not any effect on histomorphometric parameters. In extract treated diabetic groups, the mean of body weight, histologic parameters and spermatogenesis indices were improved in comparison to non-treated diabetic group. The results of this study showed that, natural antioxidant such as cydonia oblonga leaf extract in some degrees could be effective in reduction of hyperglycemic side effects on target organs.

  12. Structural alignment of proteins by a novel TOPOFIT method, as a superimposition of common volumes at a topomax point

    Science.gov (United States)

    Ilyin, Valentin A.; Abyzov, Alexej; Leslin, Chesley M.

    2004-01-01

    Similarity of protein structures has been analyzed using three-dimensional Delaunay triangulation patterns derived from the backbone representation. It has been found that structurally related proteins have a common spatial invariant part, a set of tetrahedrons, mathematically described as a common spatial subgraph volume of the three-dimensional contact graph derived from Delaunay tessellation (DT). Based on this property of protein structures, we present a novel common volume superimposition (TOPOFIT) method to produce structural alignments. Structural alignments usually evaluated by a number of equivalent (aligned) positions (Ne) with corresponding root mean square deviation (RMSD). The superimposition of the DT patterns allows one to uniquely identify a maximal common number of equivalent residues in the structural alignment. In other words, TOPOFIT identifies a feature point on the RMSD Ne curve, a topomax point, until which the topologies of two structures correspond to each other, including backbone and interresidue contacts, whereas the growing number of mismatches between the DT patterns occurs at larger RMSD (Ne) after the topomax point. It has been found that the topomax point is present in all alignments from different protein structural classes; therefore, the TOPOFIT method identifies common, invariant structural parts between proteins. The alignments produced by the TOPOFIT method have a good correlation with alignments produced by other current methods. This novel method opens new opportunities for the comparative analysis of protein structures and for more detailed studies on understanding the molecular principles of tertiary structure organization and functionality. The TOPOFIT method also helps to detect conformational changes, topological differences in variable parts, which are particularly important for studies of variations in active/ binding sites and protein classification. PMID:15215530

  13. 钙质砂颗粒内孔隙的结构特征分析%Microscopic characterization of intra-pore structures of calcareous sands

    Institute of Scientific and Technical Information of China (English)

    朱长歧; 陈海洋; 孟庆山; 汪稔

    2014-01-01

    钙质砂是一种碳酸钙含量达50%以上的海洋生物成因的颗粒状材料。从微观结构上来看,钙质砂颗粒棱角度高、形状不规则、强度低、易破碎,且颗粒含有内孔隙。内孔隙的存在深刻影响着钙质砂的压缩、剪切和破碎等力学性能。利用激光技术对南沙群岛永暑礁环礁泻湖的未胶结钙质砂颗粒进行飞秒切割,通过光学显微镜探查并获取了颗粒的内孔隙图像,借助MATLAB图像处理软件,对钙质砂颗粒的内孔隙进行了定量分析。结果表明:较大颗粒钙质砂的内孔隙断面孔隙度相对较大,小孔隙数量较多,而大孔隙所占空间则较大;对于1 mm以上的钙质砂,缝隙状内孔隙含量远低于等轴或不等轴孔隙,等轴与不等轴内孔数量大致相等。%Calcareous sands are consisted of marine biogenic granular materials with carbonate content often greater than 50%. From the microscopic viewpoint, calcareous sand grains demonstrate highly angular and irregular in shapes and contain intra-pores. This unique intra-pore structure of calcareous sand particle is prone to crush under stress. Therefore, the calcareous sand has a relatively low strength. The intra-pore structure has a significant effect on the geotechnical properties of calcareous sands. Calcareous sand samples from the lagoon of Yongshu Reef atoll, Nansha Islands, were cut by femtosecond laser for the optical microscopic studies. The intra-pore structures were quantitatively analyzed throughout the MATLAB digital image process tool. The results indicate that, larger porosity can be found on the breakage section of larger size calcareous sand and a larger number of small pores with small total volume are in the intra-pore structure. For sand grains with a size greater than one millimeter, the number of slit shape intra-pores is far less than the number of intra-voids with equiaxed or unequal axed pores. The amount of the equiaxed and

  14. Foldscope: Origami-Based Paper Microscope

    Science.gov (United States)

    Cybulski, James S.; Clements, James; Prakash, Manu

    2014-01-01

    Here we describe an ultra-low-cost origami-based approach for large-scale manufacturing of microscopes, specifically demonstrating brightfield, darkfield, and fluorescence microscopes. Merging principles of optical design with origami enables high-volume fabrication of microscopes from 2D media. Flexure mechanisms created via folding enable a flat compact design. Structural loops in folded paper provide kinematic constraints as a means for passive self-alignment. This light, rugged instrument can survive harsh field conditions while providing a diversity of imaging capabilities, thus serving wide-ranging applications for cost-effective, portable microscopes in science and education. PMID:24940755

  15. Foldscope: origami-based paper microscope.

    Directory of Open Access Journals (Sweden)

    James S Cybulski

    Full Text Available Here we describe an ultra-low-cost origami-based approach for large-scale manufacturing of microscopes, specifically demonstrating brightfield, darkfield, and fluorescence microscopes. Merging principles of optical design with origami enables high-volume fabrication of microscopes from 2D media. Flexure mechanisms created via folding enable a flat compact design. Structural loops in folded paper provide kinematic constraints as a means for passive self-alignment. This light, rugged instrument can survive harsh field conditions while providing a diversity of imaging capabilities, thus serving wide-ranging applications for cost-effective, portable microscopes in science and education.

  16. Foldscope: Origami-based paper microscope

    CERN Document Server

    Cybulski, James; Prakash, Manu

    2014-01-01

    Here we describe an ultra-low-cost origami-based approach for large-scale manufacturing of microscopes, specifically demonstrating brightfield, darkfield, and fluorescence microscopes. Merging principles of optical design with origami enables high-volume fabrication of microscopes from 2D media. Flexure mechanisms created via folding enable a flat compact design. Structural loops in folded paper provide kinematic constraints as a means for passive self-alignment. This light, rugged instrument can survive harsh field conditions while providing a diversity of imaging capabilities, thus serving wide-ranging applications for cost-effective, portable microscopes in science and education.

  17. In situ microscopic studies on the structures and phase behaviors of SF/PEG films using solid-state NMR and Raman imaging.

    Science.gov (United States)

    Chen, Congheng; Yao, Ting; Tu, Sidong; Xu, Weijie; Han, Yi; Zhou, Ping

    2016-06-28

    In order to overcome the drawbacks of silk fibroin (SF)-based materials, SF has been blended with some polymers. Before using the blend material, understanding of the structures and phase behaviors of the blend is thought to be essential. In this study, solid-state (13)C CP-MAS NMR and Raman imaging techniques were used to study the structures and phase behaviors of blends of SF with polyethylene glycol (PEG) at a molecular weight that varied from 2 to 20 kDa and a blend ratio of SF/PEG from 95/5 to 70/30 (w/w%) at the molecular and microscopic levels. It is found that the conformational transition of SF to the β-sheet increased as the PEG content increased, while the amount of the formed β-sheet conformers was decreased as the PEG molecular weight increased for a given content. It is also observed that SF was incompatible with PEG to some extent. The phase separation into "sea" and "island" domains took place in the SF/PEG blend films. SF was dominantly present in the "sea" domain, while PEG in the "island" domains. The conformation of SF in the interface between SF and PEG was changed to the β-sheet, while that in the protein-rich domain remained in the random coil and/or helix conformation. These observations suggest that the specifically expected materials, for example, the silk-based microspheres or scaffold materials can be manufactured by controlling the molecular weight and content of PEG in the blend system.

  18. Phase structure, critical points and susceptibilities in Nambu-Jona-Lasinio type models

    CERN Document Server

    De Sousa, C A; Ruivo, M C

    2008-01-01

    We investigate the chiral phase transition at finite temperature and chemical potential within SU(2) and SU(3) Nambu-Jona-Lasinio type models. The behavior of the baryon number susceptibility and the specific heat, in the vicinity of the critical end point, is studied. The class of the critical points is analyzed by calculating critical exponents.

  19. Cryogenic immersion microscope

    Science.gov (United States)

    Le Gros, Mark; Larabell, Carolyn A.

    2010-12-14

    A cryogenic immersion microscope whose objective lens is at least partially in contact with a liquid reservoir of a cryogenic liquid, in which reservoir a sample of interest is immersed is disclosed. When the cryogenic liquid has an index of refraction that reduces refraction at interfaces between the lens and the sample, overall resolution and image quality are improved. A combination of an immersion microscope and x-ray microscope, suitable for imaging at cryogenic temperatures is also disclosed.

  20. Analytical Electron Microscope

    Data.gov (United States)

    Federal Laboratory Consortium — The Titan 80-300 is a transmission electron microscope (TEM) equipped with spectroscopic detectors to allow chemical, elemental, and other analytical measurements to...

  1. Microscopic versus macroscopic calculation of dielectric nanospheres

    Science.gov (United States)

    Kühn, M.; Kliem, H.

    2008-12-01

    The issue of nanodielectrics has recently become an important field of interest. The term describes nanometric dielectrics, i. e. dielectric materials with structural dimensions typically smaller than 100 run. In contrast to the behaviour of a bulk material the nanodielectrics can behave completely different. With shrinking dimensions the surface or rather boundary effects outweigh the volume effects. This leads to a different observable physics at the nanoscale. A crucial point is the question whether a continuum model for the calculation of dielectric properties is still applicable for these nanomaterials. In order to answer this question we simulated dielectric nanospheres with a microscopic local field method and compared the results to the macroscopic mean field theory.

  2. The Shengli I Point Bar on the Yellow River Delta: Three-Dimensional Structures and Their Evolution

    Institute of Scientific and Technical Information of China (English)

    钟建华; 沈晓华; 倪晋仁; 王冠民; 温志峰; 王夕宾; 王海桥; 李理; 吴孔友; 李勇; 洪梅

    2002-01-01

    Point bars are well developed on the Yellow River delta, among which the Shengli I point bar is the mosttypical. The point bar, being about 4 km in length and several tens to more than 100 meters in width, is located on the southside of the Shengli Bridge in Kenli County, Dongying, Shandong. It is a typical fine-grained point bar with silt, which ispredominant, some clay and minor plant debris and clay boulders. The Shengli I point bar has complicated 3-D structures.Firstly, in a plane view, it comprises mainly eight sedimentary units, bar edge, bar ridge, bar platform, bar plain, bar channel,bar gully, bar pond and bar bay, developing side by side and superimposed one by one in a complex way. Secondly, itsvertical structures are very complex due to the partial superimposition of the 8 sedimentary units. Besides hydatogenesis, veryintensive wind erosion, eolian, ice and meltwater actions are also visible on the Shengli I point bar. The complex form is madeeven more complicated because of the above co-actions.

  3. Heterogeneity-corrected vs -uncorrected critical structure maximum point doses in breast balloon brachytherapy

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Leonard, E-mail: kimlh@umdnj.edu [Department of Radiation Oncology, Cancer Institute of New Jersey, Robert Wood Johnson Medical School, University of Medicine and Dentistry of New Jersey, New Brunswick, NJ (United States); Narra, Venkat; Yue, Ning [Department of Radiation Oncology, Cancer Institute of New Jersey, Robert Wood Johnson Medical School, University of Medicine and Dentistry of New Jersey, New Brunswick, NJ (United States)

    2013-07-01

    Recent studies have reported potentially clinically meaningful dose differences when heterogeneity correction is used in breast balloon brachytherapy. In this study, we report on the relationship between heterogeneity-corrected and -uncorrected doses for 2 commonly used plan evaluation metrics: maximum point dose to skin surface and maximum point dose to ribs. Maximum point doses to skin surface and ribs were calculated using TG-43 and Varian Acuros for 20 patients treated with breast balloon brachytherapy. The results were plotted against each other and fit with a zero-intercept line. Max skin dose (Acuros) = max skin dose (TG-43) ⁎ 0.930 (R{sup 2} = 0.995). The average magnitude of difference from this relationship was 1.1% (max 2.8%). Max rib dose (Acuros) = max rib dose (TG-43) ⁎ 0.955 (R{sup 2} = 0.9995). The average magnitude of difference from this relationship was 0.7% (max 1.6%). Heterogeneity-corrected maximum point doses to the skin surface and ribs were proportional to TG-43-calculated doses. The average deviation from proportionality was 1%. The proportional relationship suggests that a different metric other than maximum point dose may be needed to obtain a clinical advantage from heterogeneity correction. Alternatively, if maximum point dose continues to be used in recommended limits while incorporating heterogeneity correction, institutions without this capability may be able to accurately estimate these doses by use of a scaling factor.

  4. Heterogeneity-corrected vs -uncorrected critical structure maximum point doses in breast balloon brachytherapy.

    Science.gov (United States)

    Kim, Leonard; Narra, Venkat; Yue, Ning

    2013-01-01

    Recent studies have reported potentially clinically meaningful dose differences when heterogeneity correction is used in breast balloon brachytherapy. In this study, we report on the relationship between heterogeneity-corrected and -uncorrected doses for 2 commonly used plan evaluation metrics: maximum point dose to skin surface and maximum point dose to ribs. Maximum point doses to skin surface and ribs were calculated using TG-43 and Varian Acuros for 20 patients treated with breast balloon brachytherapy. The results were plotted against each other and fit with a zero-intercept line. Max skin dose (Acuros) = max skin dose (TG-43) * 0.930 (R(2) = 0.995). The average magnitude of difference from this relationship was 1.1% (max 2.8%). Max rib dose (Acuros) = max rib dose (TG-43) * 0.955 (R(2) = 0.9995). The average magnitude of difference from this relationship was 0.7% (max 1.6%). Heterogeneity-corrected maximum point doses to the skin surface and ribs were proportional to TG-43-calculated doses. The average deviation from proportionality was 1%. The proportional relationship suggests that a different metric other than maximum point dose may be needed to obtain a clinical advantage from heterogeneity correction. Alternatively, if maximum point dose continues to be used in recommended limits while incorporating heterogeneity correction, institutions without this capability may be able to accurately estimate these doses by use of a scaling factor.

  5. Mailing microscope slides

    Science.gov (United States)

    Many insects feed agriculturally important crops, trees, and ornamental plants and cause millions of dollars of damage annually. Identification for some of these require the preparation of a microscope slide for examination. There are times when a microscope slide may need to be sent away to a speci...

  6. The structure of fixed-point tensor network states characterizes the patterns of long-range entanglement

    Science.gov (United States)

    Luo, Zhu-Xi; Lake, Ethan; Wu, Yong-Shi

    2017-07-01

    The algebraic structure of representation theory naturally arises from 2D fixed-point tensor network states, and conceptually formulates the pattern of long-range entanglement realized in such states. In 3D, the same underlying structure is also shared by Turaev-Viro state-sum topological quantum field theory (TQFT). We show that a 2D fixed-point tensor network state arises naturally on the boundary of the 3D manifold on which the TQFT is defined, and the fact that exactly the same information is needed to construct either the tensor network or the TQFT is made explicit in a form of holography. Furthermore, the entanglement of the fixed-point states leads to an emergence of pregeometry in the 3D TQFT bulk. We further extend these ideas to the case where an additional global on-site unitary symmetry is imposed on the tensor network states.

  7. Structured Spatio-temporal shot-noise Cox point process models, with a view to modelling forest fires

    DEFF Research Database (Denmark)

    Møller, Jesper; Diaz-Avalos, Carlos

    2010-01-01

    Spatio-temporal Cox point process models with a multiplicative structure for the driving random intensity, incorporating covariate information into temporal and spatial components, and with a residual term modelled by a shot-noise process, are considered. Such models are flexible and tractable...

  8. Structured spatio-temporal shot-noise Cox point process models, with a view to modelling forest fires

    DEFF Research Database (Denmark)

    Møller, Jesper; Diaz-Avalos, Carlos

    Spatio-temporal Cox point process models with a multiplicative structure for the driving random intensity, incorporating covariate information into temporal and spatial components, and with a residual term modelled by a shot-noise process, are considered. Such models are flexible and tractable...

  9. Understanding and caring for an operating microscope

    Directory of Open Access Journals (Sweden)

    Ismael Cordero

    2014-04-01

    Full Text Available An operating or surgical microscope is an optical instrument that provides the surgeon with a stereoscopic, high quality magnified and illuminated image of the small structures in the surgical area.

  10. Structure of the RNA polymerase core-binding domain of sigma(54) reveals a likely conformational fracture point.

    Science.gov (United States)

    Hong, Eunmi; Doucleff, Michaeleen; Wemmer, David E

    2009-07-03

    Transcription initiation by bacterial sigma(54)-RNA polymerase requires a conformational change of the holopolymerase-DNA complex, driven by an enhancer-binding protein. Although structures of the core polymerase and the more common sigma(70) factor have been determined, little is known about the structure of the sigma(54) variant. We report here the structure of an Aquifex aeolicus sigma(54) domain (residues 69-198), which binds core RNA polymerase. The structure is composed of two distinct subdomains held together by a small, conserved hydrophobic interface that appears to act as a fracture point in the structure. The N-terminal, four-helical subdomain has a negative surface and conserved residues that likely contact the core polymerase, while the C-terminal, three-helical bundle has a strongly positive patch that could contact DNA. Sequence conservation indicates that these structural features are conserved and are important for the role of sigma(54) in the polymerase complex.

  11. Recent Advances in Optimal Design of Structures from a Reliability Point of View

    DEFF Research Database (Denmark)

    Thoft-Christensen, Palle; Sørensen, John Dalsgaard

    1987-01-01

    Structural optimisation and structural reliability theory are considered. Both of these areas have developed during the last two decades from being of purely theoretical interest to areas useful in practical design. The main elements of structural reliability theory are described in the second......-Christensen and Baker[4] and Madsen et al.[5]. Next a heuristic method, the so-called ß-unzipping method[6] is mentioned. This method can be used to estimate the reliability of a structural system if some modelling assumptions are fulfilled. In the third section some elements of structural optimisation theory...

  12. N-point Statistics of Large-Scale Structure in the Zel'dovich Approximation

    OpenAIRE

    Tassev, Svetlin

    2013-01-01

    Motivated by the results presented in a companion paper, here we give a simple analytical expression for the matter n-point functions in the Zel'dovich approximation (ZA) both in real and in redshift space (including the angular case). We present numerical results for the 2-dimensional redshift-space correlation function, as well as for the equilateral configuration for the real-space 3-point function. We compare those to the tree-level results. Our analysis is easily extendable to include La...

  13. Remarks on the complex branch points in pi-N scattering amplitude and the multiple poles structure of resonances

    CERN Document Server

    Yang, Shin Nan

    2011-01-01

    A simple heuristic argument to understand the existence of branch points in the unphysical sheet for pi-N scattering amplitude is presented. It is based on a hypothesis that the singularity structure of the pi-N scattering amplitude is a smooth varying function of the pion mass. We find that, in general, multiple poles structure of a resonance is a direct mathematical consequence when additional Riemann surface is included in the study and the two-pole structure found to correspond to the Roper resonance is a good example.

  14. Octupolar out-of-plane magnetic field structure generation during collisionless magnetic reconnection in a stressed X-point collapse

    Energy Technology Data Exchange (ETDEWEB)

    Graf von der Pahlen, J.; Tsiklauri, D. [School of Physics and Astronomy, Queen Mary University of London, London E1 4NS (United Kingdom)

    2014-06-15

    The out-of-plane magnetic field, generated by fast magnetic reconnection, during collisionless, stressed X-point collapse, was studied with a kinetic, 2.5D, fully electromagnetic, relativistic particle-in-cell numerical code, using both closed (flux conserving) and open boundary conditions on a square grid. It was discovered that the well known quadrupolar structure in the out-of-plane magnetic field gains four additional regions of opposite magnetic polarity, emerging near the corners of the simulation box, moving towards the X-point. The emerging, outer, magnetic field structure has opposite polarity to the inner quadrupolar structure, leading to an overall octupolar structure. Using Ampere's law and integrating electron and ion currents, defined at grid cells, over the simulation domain, contributions to the out-of-plane magnetic field from electron and ion currents were determined. The emerging regions of opposite magnetic polarity were shown to be the result of ion currents. Magnetic octupolar structure is found to be a signature of X-point collapse, rather than tearing mode, and factors relating to potential discoveries in experimental scenarios or space-craft observations are discussed.

  15. Real-time microscopic phase-shifting profilometry.

    Science.gov (United States)

    Van der Jeught, Sam; Soons, Joris A M; Dirckx, Joris J J

    2015-05-20

    A real-time microscopic profilometry system based on digital fringe projection and parallel programming has been developed and experimentally tested. Structured light patterns are projected onto an object through one pathway of a stereoscopic operation microscope. The patterns are deformed by the shape of the object and are then recorded with a high-speed CCD camera placed in the other pathway of the microscope. As the optical pathways of both arms are separated and reach the same object point at a relative angle, the recorded patterns allow the full-field object height variations to be calculated and the three-dimensional shape to be reconstructed by employing standard triangulation techniques. Applying proper hardware triggering, the projector-camera system is synchronized to capture up to 120 unique deformed line patterns per second. Using standard four-step phase-shifting profilometry techniques and applying graphics processing unit programming for fast phase wrapping, scaling, and visualization, we demonstrate the capability of the proposed system to generate 30 microscopic height maps per second. This allows the qualitative depth perception of the stereomicroscope operator to be enhanced by live quantitative height measurements with depth resolutions in the micrometer range.

  16. Efficient Structure-Aware Selection Techniques for 3D Point Cloud Visualizations with 2DOF Input

    NARCIS (Netherlands)

    Yu, Lingyun; Efstathiou, Konstantinos; Isenberg, Petra; Isenberg, Tobias

    2012-01-01

    Data selection is a fundamental task in visualization because it serves as a pre-requisite to many follow-up interactions. Efficient spatial selection in 3D point cloud datasets consisting of thousands or millions of particles can be particularly challenging. We present two new techniques, TeddySele

  17. Efficient Structure-Aware Selection Techniques for 3D Point Cloud Visualizations with 2DOF Input

    NARCIS (Netherlands)

    Yu, Lingyun; Efstathiou, Konstantinos; Isenberg, Petra; Isenberg, Tobias

    2012-01-01

    Data selection is a fundamental task in visualization because it serves as a pre-requisite to many follow-up interactions. Efficient spatial selection in 3D point cloud datasets consisting of thousands or millions of particles can be particularly challenging. We present two new techniques,

  18. Fine structure of point defects and soliton decay in nematic liquid crystals

    OpenAIRE

    Penzenstadler, E.; Trebin, H. -R.

    1989-01-01

    On the basis of Landau-de Gennes-theory it is demonstrated that point defects in nematic liquid crystals may have a biaxial nonsingular core. From this result a critical diameter is derived for linear topological solitons in nematics. Solitons of smaller diameter can relax to the uniform nematic state without energy barrier via an intermediate biaxial phase.

  19. [Microscopic colitis: update 2014].

    Science.gov (United States)

    Burgmann, Konstantin; Fraga, Montserrat; Schoepfer, Alain M; Yun, Pu

    2014-09-03

    Microscopic colitis, which includes lymphocytic colitis and collagenous colitis, represents a frequent cause of chronic watery diarrhea especially in the elderly population. Several medications, such as nonsteroidal antiinflammatory drugs, proton pump inhibitors or antidepressants, as well as cigarette smoking have been recognized as risk factors for microscopic colitis. The diagnosis of microscopic colitis is based on a macroscopically normal ileo-colonoscopy and several biopsies from the entire colon, which demonstrate the pathognomonic histopathologic findings. Therapy is mainly based on the use of budesonide. Other medications, such as mesalazine, cholestyramine and bismuth, have been evaluated as well but the evidence is less solid.

  20. Live-cell tracking using SIFT features in DIC microscopic videos.

    Science.gov (United States)

    Jiang, Richard M; Crookes, Danny; Luo, Nie; Davidson, Michael W

    2010-09-01

    In this paper, a novel motion-tracking scheme using scale-invariant features is proposed for automatic cell motility analysis in gray-scale microscopic videos, particularly for the live-cell tracking in low-contrast differential interference contrast (DIC) microscopy. In the proposed approach, scale-invariant feature transform (SIFT) points around live cells in the microscopic image are detected, and a structure locality preservation (SLP) scheme using Laplacian Eigenmap is proposed to track the SIFT feature points along successive frames of low-contrast DIC videos. Experiments on low-contrast DIC microscopic videos of various live-cell lines shows that in comparison with principal component analysis (PCA) based SIFT tracking, the proposed Laplacian-SIFT can significantly reduce the error rate of SIFT feature tracking. With this enhancement, further experimental results demonstrate that the proposed scheme is a robust and accurate approach to tackling the challenge of live-cell tracking in DIC microscopy.

  1. A randomized Mirror-Prox method for solving structured large-scale matrix saddle-point problems

    CERN Document Server

    Baes, Michel; Nemirovski, Arkadi

    2011-01-01

    In this paper, we derive a randomized version of the Mirror-Prox method for solving some structured matrix saddle-point problems, such as the maximal eigenvalue minimization problem. Deterministic first-order schemes, such as Nesterov's Smoothing Techniques or standard Mirror-Prox methods, require the exact computation of a matrix exponential at every iteration, limiting the size of the problems they can solve. Our method allows us to use stochastic approximations of matrix exponentials. We prove that our randomized scheme decreases significantly the complexity of its deterministic counterpart for large-scale matrix saddle-point problems. Numerical experiments illustrate and confirm our theoretical results.

  2. A Lidar Point Cloud Based Procedure for Vertical Canopy Structure Analysis And 3D Single Tree Modelling in Forest.

    Science.gov (United States)

    Wang, Yunsheng; Weinacker, Holger; Koch, Barbara

    2008-06-12

    A procedure for both vertical canopy structure analysis and 3D single tree modelling based on Lidar point cloud is presented in this paper. The whole area of research is segmented into small study cells by a raster net. For each cell, a normalized point cloud whose point heights represent the absolute heights of the ground objects is generated from the original Lidar raw point cloud. The main tree canopy layers and the height ranges of the layers are detected according to a statistical analysis of the height distribution probability of the normalized raw points. For the 3D modelling of individual trees, individual trees are detected and delineated not only from the top canopy layer but also from the sub canopy layer. The normalized points are resampled into a local voxel space. A series of horizontal 2D projection images at the different height levels are then generated respect to the voxel space. Tree crown regions are detected from the projection images. Individual trees are then extracted by means of a pre-order forest traversal process through all the tree crown regions at the different height levels. Finally, 3D tree crown models of the extracted individual trees are reconstructed. With further analyses on the 3D models of individual tree crowns, important parameters such as crown height range, crown volume and crown contours at the different height levels can be derived.

  3. Calculation of condition indices for road structures using a deduct points method

    CSIR Research Space (South Africa)

    Roux, MP

    2016-07-01

    Full Text Available The DER-rating method has been adopted as the national standard for the rating of road structures. This method is defects-based and involves the rating of defects on the various inspections items of road structures in terms of degree (D), extent (E...

  4. Four point probe structures with buried electrodes for the electrical characterization of ultrathin conducting films

    NARCIS (Netherlands)

    Groenland, A.W.; Wolters, R.A.M.; Kovalgin, A.Y.; Schmitz, J.

    2009-01-01

    Test structures for the electrical characterization of ultrathin conductive (ALD) films are presented based on buried electrodes on which the ultrathin film is deposited. This work includes test structure design and fabrication, and the electrical characterization of ALD TiN films down to 4 nm. It i

  5. Microscopic features of moving traffic jams

    CERN Document Server

    Kerner, B S; Klenov, S L; Rehborn, H; Hiller, Andreas; Kerner, Boris S.; Klenov, Sergey L.; Rehborn, Hubert

    2005-01-01

    Empirical and numerical microscopic features of moving traffic jams are presented. Based on a single vehicle data analysis, it is found that within wide moving jams, i.e., between the upstream and downstream jam fronts there is a complex microscopic spatiotemporal structure. This jam structure consists of alternations of regions in which traffic flow is interrupted and flow states of low speeds associated with "moving blanks" within the jam. Empirical features of the moving blanks are found. Based on microscopic models in the context of three-phase traffic theory, physical reasons for moving blanks emergence within wide moving jams are disclosed. Structure of moving jam fronts is studied based in microscopic traffic simulations. Non-linear effects associated with moving jam propagation are numerically investigated and compared with empirical results.

  6. Gelation on the microscopic scale

    Science.gov (United States)

    Oppong, Felix K.; Coussot, P.; de Bruyn, John R.

    2008-08-01

    Particle-tracking methods are used to study gelation in a colloidal suspension of Laponite clay particles. We track the motion of small fluorescent polystyrene spheres added to the suspension, and obtain the micron-scale viscous and elastic moduli of the material from their mean-squared displacement. The fluorescent spheres move subdiffusively due to the microstructure of the suspension, with the diffusive exponent decreasing from close to one at early times to near zero as the material gels. The particle-tracking data show that the system becomes more heterogeneous on the microscopic scale as gelation proceeds. We also determine the bulk-scale moduli using small-amplitude oscillatory shear rheometry. Both the macroscopic and microscopic moduli increase with time, and on both scales we observe a transition from a primarily viscous fluid to an elastic gel. We find that the gel point, determined as the time at which the viscous and elastic moduli are equal, is length-scale dependent—gelation occurs earlier on the bulk scale than on the microscopic scale.

  7. VERTICAL VEGETATION STRUCTURE ANALYSIS AND HYDRAULIC ROUGHNESS DETERMINATION USING DENSE ALS POINT CLOUD DATA - A VOXEL BASED APPROACH

    Directory of Open Access Journals (Sweden)

    M. Vetter

    2012-09-01

    Full Text Available In this contribution the complexity of the vertical vegetation structure, based on dense airborne laser scanning (ALS point cloud data (25 echoes/m2 , is analyzed to calculate vegetation roughness for hydraulic applications. Using the original 3D ALS point cloud, three levels of abstractions are derived (cells, voxels and connections to analyze ALS data based on a 1×1 m2 raster over the whole data set. A voxel structure is used to count the echoes in predefined detrended height levels within each cell. In general, it is assumed that the number of voxels containing echoes is an indicator for elevated objects and consequently for increased roughness. Neighboring voxels containing at least one data point are merged together to connections. An additional height threshold is applied to connect vertical neighboring voxels with a certain distance in between. Thus, the connections indicate continuous vegetation structures. The height of the surface near or lowest connection is an indicator for hydrodynamic roughness coefficients. For cells, voxels and connections the laser echoes are counted within the structure and various statistical measures are calculated. Based on these derived statistical parameters a rule-based classification is developed by applying a decision tree to assess vegetation types. Roughness coefficient values such as Manning's n are estimated, which are used as input for 2D hydrodynamic-numerical modeling. The estimated Manning’s values from the ALS point cloud are compared with a traditional Manning's map. Finally, the effect of these two different Manning's n maps as input on the 2D hydraulics are quantified by calculating a height difference model of the inundated depth maps. The results show the large potential of using the entire vertical vegetation structure for hydraulic roughness estimation.

  8. Study on wood structure of Dalbergia odorifera by scanning electron microscope%扫描电镜下降香黄檀木材构造的研究

    Institute of Scientific and Technical Information of China (English)

    吕金阳; 罗建举

    2014-01-01

    利用扫描电镜对降香黄檀Dalbergia odorifera T. Chen木材的组织构造进行了系统分析,重点分析了不同类型细胞的纹孔的典型特征。降香黄檀木材导管壁上的纹孔为互列式,附物非常丰富;轴向薄壁细胞壁上为单纹孔,个体较大而数量较小,成组聚集分布,3~5个一组呈猫爪或花瓣状。木材纵切面上,轴向薄壁组织中常见似“分室含晶细胞”,但经X-射线能谱仪分析表明,这种“分室含晶细胞”中的块状物并不是传统认为的草酸钙等无机盐物质,其主要组成元素为碳和氧,由此可初步认定这种似“分室含晶细胞”中的块状物为树胶类物质。%The wood structure of Dalbergia odorifera T. Chen was systematically analyzed with the scanning electron micro-scope, the typical characteristics of the wood pits of different type woods were earnestly analyzed. It was found that the wood pits on the vessel wall of Dalbergia odorifera wood presented in the form of inter-row, the attached materials were very rich; the pits on the axial parenchyma cell walls belong to single pits with larger body but less in number compared to the vessel pits, they aggregated into groups of 3~5 and looked like cat’s paws or petals;on the longitudinal sections, something like“compartment crystal cells”in axial parenchyma was commonly found, but the lumps in the“compartment crystal cells”are not inorganic salts such as calcium oxalate, as traditionally recognized. The results of X-ray energy dispersive spectroscopy analysis show that the composition elements of the lumps were mainly carbon and oxygen. According to this, it may be concluded that the lumps in the“compartment crystal cells”belong to the gum substances.

  9. Analytical invariant manifolds near unstable points and the structure of chaos

    CERN Document Server

    Efthymiopoulos, C; Katsanikas, M

    2014-01-01

    It is known that the asymptotic invariant manifolds around an unstable periodic orbit in conservative systems can be represented by convergent series (Cherry 1926, Moser 1956, 1958, Giorgilli 2001). The unstable and stable manifolds intersect at an infinity of homoclinic points, generating a complicated homoclinic tangle. In the case of simple mappings it was found (Da Silva Ritter et al. 1987) that the domain of convergence of the formal series extends to infinity along the invariant manifolds. This allows in practice to study the homoclinic tangle using only series. However in the case of Hamiltonian systems, or mappings with a finite analyticity domain,the convergence of the series along the asymptotic manifolds is also finite. Here, we provide numerical indications that the convergence does not reach any homoclinic points. We discuss in detail the convergence problem in various cases and we find the degree of approximation of the analytical invariant manifolds to the real (numerical) manifolds as i) the o...

  10. Fixed point structure of the conformal factor field in quantum gravity

    Science.gov (United States)

    Dietz, Juergen A.; Morris, Tim R.; Slade, Zoë H.

    2016-12-01

    The O (∂2) background-independent flow equations for conformally reduced gravity are shown to be equivalent to flow equations naturally adapted to scalar field theory with a wrong-sign kinetic term. This sign change is shown to have a profound effect on the renormalization group properties, broadly resulting in a continuum of fixed points supporting both a discrete and a continuous eigenoperator spectrum, the latter always including relevant directions. The properties at the Gaussian fixed point are understood in particular depth, but also detailed studies of the local potential approximation, and the full O (∂2) approximation are given. These results are related to evidence for asymptotic safety found by other authors.

  11. Microscopic approach to polaritons

    DEFF Research Database (Denmark)

    Skettrup, Torben

    1981-01-01

    contrary to experimental experience. In order to remove this absurdity the semiclassical approach must be abandoned and the electromagnetic field quantized. A simple microscopic polariton model is then derived. From this the wave function for the interacting exciton-photon complex is obtained...... of light of the crystal. The introduction of damping smears out the excitonic spectra. The wave function of the polariton, however, turns out to be very independent of damping up to large damping values. Finally, this simplified microscopic polariton model is compared with the exact solutions obtained...... for the macroscopic polariton model by Hopfield. It is seen that standing photon and exciton waves must be included in an exact microscopic polariton model. However, it is concluded that for practical purposes, only the propagating waves are of importance and the simple microscopic polariton wave function derived...

  12. Scanning Auger Electron Microscope

    Data.gov (United States)

    Federal Laboratory Consortium — A JEOL model 7830F field emission source, scanning Auger microscope. Specifications / Capabilities: Ultra-high vacuum (UHV), electron gun range from 0.1 kV to 25 kV,...

  13. The Correlation Confocal Microscope

    CERN Document Server

    Simon, D S

    2010-01-01

    A new type of confocal microscope is described which makes use of intensity correlations between spatially correlated beams of light. It is shown that this apparatus leads to significantly improved transverse resolution.

  14. Scanning Auger Electron Microscope

    Data.gov (United States)

    Federal Laboratory Consortium — A JEOL model 7830F field emission source, scanning Auger microscope.Specifications / Capabilities:Ultra-high vacuum (UHV), electron gun range from 0.1 kV to 25 kV,...

  15. The end-point and course detection of plasma-chemical reactions on semiconductor structures

    Energy Technology Data Exchange (ETDEWEB)

    Janca, J. (Universita J.E. Purkyne, Brno, Czechoslovakia); Konecny, Z. (TESLA Roznov, n.p., Roznov pod Radhostem, Czechoslovakia)

    1980-01-01

    The end point and courses of the photoresist removal oxygen plasma by RF were determined by optical emission and mass spectrometry. The spectroscopic analysis shows large changes in CO and N2 molecular spectra the time dependencies of mass spectra are similar to optical spectroscopy results, but the interpretation is more complicated. This study demonstrates a process monitoring system which automatically detects and signals the completion of etching processes from etched wafers.

  16. Microscopic colitis: a review.

    Science.gov (United States)

    Farrukh, A; Mayberry, J F

    2014-12-01

    In recent years, microscopic colitis has been increasingly diagnosed. This review was carried out to evaluate demographic factors for microscopic colitis and to perform a systematic assessment of available treatment options. Relevant publications up to December 2013 were identified following searches of PubMed and Google Scholar using the key words 'microscopic colitis', 'collagenous colitis' and 'lymphocytic colitis'. Two-hundred and forty-eight articles were identified. The term microscopic colitis includes lymphocytic colitis and collagenous colitis. Both have common clinical symptoms but are well defined histopathologically. The clinical course is usually benign, but serious complications, including death, may occur. A peak incidence from 60 to 70 years of age with a female preponderance is observed. Although most cases are idiopathic, associations with autoimmune disorders, such as coeliac disease and hypothyroidism, as well as with exposure to nonsteroidal anti-inflammatory drugs and proton-pump inhibitors, have been observed. The incidence and prevalence of microscopic colitis is rising and good-quality epidemiological research is needed. Treatment is currently largely based on anecdotal evidence and on results from limited clinical trials of budesonide. Long-term follow-up of these patients is not well established. The review synthesizes work on the definition of microscopic colitis and the relationship between collagenous and lymphocytic colitis. It reviews the international epidemiology and work on aetiology. In addition, it critically considers the efficacy of a range of treatments. Colorectal Disease © 2014 The Association of Coloproctology of Great Britain and Ireland.

  17. Canals - CANALS_HISTORIC_STRUCTURES_IN: Historic Canal Structures in Indiana (Bernardin-Lochmueller & Associates, Point Shapefile)

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Data depicts the locations of historic structures associated with the Wabash-Erie, Central, and Whitewater Canals constructed in Indiana in from 1830-1870. Canal...

  18. ON THE STRUCTURES OF RANDOM MEASURE AND POINT PROCESS CONVOLUTION SEMIGROUPS

    Institute of Scientific and Technical Information of China (English)

    HEYUANJIANG

    1996-01-01

    Let D be a convolution semigroup of random measures or point processes on a locally compact second countable T2 space. There is a topological isomorphism from D into a subsemigroup of product topological semigroup (R+, +)N. D is a sequentially stable and D-separableZH-semigroup, as well as a metrizable, stable and normable Hun semigroup, so it has the corresponding properties. In particular the author has a new and simple proof by ZH-semigroupapproach or Hun semigroup approach to show that D has property ILID (an infinitesimal arraylimit is infinitely divisible), and know the Bairn types which some subsets of D belong in.

  19. Comment on ``Infrared Fixed Point Structure in Minimal Supersymmetric Standard Model with Baryon and Lepton Number Violation"

    OpenAIRE

    Mambrini, Y.; Moultaka, G.

    2001-01-01

    We reconsider the Infrared Quasi Fixed Points which were studied recently in the literature in the context of the Baryon and Lepton number violating Minimal Supersymmetric Standard Model (hep-ph/0011274). The complete analysis requires further care and reveals more structure than what was previously shown. The formalism we develop here is quite general, and can be readily applied to a large class of models.

  20. Distributed primal–dual interior-point methods for solving tree-structured coupled convex problems using message-passing

    DEFF Research Database (Denmark)

    Khoshfetrat Pakazad, Sina; Hansson, Anders; Andersen, Martin S.;

    2016-01-01

    In this paper, we propose a distributed algorithm for solving coupled problems with chordal sparsity or an inherent tree structure which relies on primal–dual interior-point methods. We achieve this by distributing the computations at each iteration, using message-passing. In comparison to existing...... distributed algorithms for solving such problems, this algorithm requires far fewer iterations to converge to a solution with high accuracy. Furthermore, it is possible to compute an upper-bound for the number of required iterations which, unlike existing methods, only depends on the coupling structure...... in the problem. We illustrate the performance of our proposed method using a set of numerical examples....

  1. Quantum points in YBa sub 2 Cu sub 3 O sub 6 sub + sub x films with tetragonal structure

    CERN Document Server

    Okunev, V D; Isaev, V A; Klimov, A; Lewandowski, S J

    2002-01-01

    The evidence of presence of clusters with metallic conductivity in the YBa sub 2 Cu sub 3 O sub 6 sub + sub x epitaxial films with the tetragonal structure (x < 0.4) is presented. In spite of the dielectric properties of the samples the areas of absorption by free charge carriers are identified in their optical spectra. The availability of metallic clusters, which at low temperatures are transformed in quantum points, responsible for the rho(T) = const sections on the resistance temperature dependences, is proved by the data of the X-ray structural analysis

  2. Steady distribution structure of point defects near crystal-melt interface under pulling stop of CZ Si crystal

    Science.gov (United States)

    Abe, T.; Takahashi, T.; Shirai, K.

    2017-02-01

    In order to reveal a steady distribution structure of point defects of no growing Si on the solid-liquid interface, the crystals were grown at a high pulling rate, which Vs becomes predominant, and the pulling was suddenly stopped. After restoring the variations of the crystal by the pulling-stop, the crystals were then left in prolonged contact with the melt. Finally, the crystals were detached and rapidly cooled to freeze point defects and then a distribution of the point defects of the as-grown crystals was observed. As a result, a dislocation loop (DL) region, which is formed by the aggregation of interstitials (Is), was formed over the solid-liquid interface and was surrounded with a Vs-and-Is-free recombination region (Rc-region), although the entire crystals had been Vs rich in the beginning. It was also revealed that the crystal on the solid-liquid interface after the prolonged contact with the melt can partially have a Rc-region to be directly in contact with the melt, unlike a defect distribution of a solid-liquid interface that has been growing. This experimental result contradicts a hypothesis of Voronkov's diffusion model, which always assumes the equilibrium concentrations of Vs and Is as the boundary condition for distribution of point defects on the growth interface. The results were disscussed from a qualitative point of view of temperature distribution and thermal stress by the pulling-stop.

  3. Structures of parasitic CDPK domains point to a common mechanism of activation

    Energy Technology Data Exchange (ETDEWEB)

    Wernimont, Amy K.; Amani, Merhnaz; Qiu, Wei; Pizarro, Juan C.; Artz, Jennifer D.; Lin, Yu-Hui; Lew, Jocelyn; Hutchinson, Ashley; Hui, Raymond (Toronto)

    2011-11-23

    We recently determined the first structures of inactivated and calcium-activated calcium-dependent protein kinases (CDPKs) from Apicomplexa. Calcium binding triggered a large conformational change that constituted a new mechanism in calcium signaling and a novel EF-hand fold (CAD, for CDPK activation domain). Thus we set out to determine if this mechanism was universal to all CDPKs. We solved additional CDPK structures, including one from the species Plasmodium. We highlight the similarities in sequence and structure across apicomplexan and plant CDPKs, and strengthen our observations that this novel mechanism could be universal to canonical CDPKs. Our new structures demonstrate more detailed steps in the mechanism of calcium activation and possible key players in regulation. Residues involved in making the largest conformational change are the most conserved across Apicomplexa, leading us to propose that the mechanism is indeed conserved. CpCDPK3{_}CAD and PfCDPK{_}CAD were captured at a possible intermediate conformation, lending insight into the order of activation steps. PfCDPK3{_}CAD adopts an activated fold, despite having an inactive EF-hand sequence in the N-terminal lobe. We propose that for most apicomplexan CDPKs, the mode of activation will be similar to that seen in our structures, while specific regulation of the inactive and active forms will require further investigation.

  4. The Effect of Large-Scale Structure on the SDSS Galaxy Three-Point Correlation Function

    CERN Document Server

    Nichol, R C; Blanton, M; Brinkmann, J; Connolly, A J; Csabai, I; Gardner, J P; Gray, A J; Jain, B; Kayo, I; Kulkarni, G; Marin, F; Miller, C J; Moore, A W; Pope, A; Pun, J; Schneider, D; Schneider, J; Sheth, R K; Suto, Y; Szalay, A S; Szapudi, I; Wechsler, R H; Zehavi, I

    2006-01-01

    We present measurements of the normalised redshift-space three-point correlation function (Q_z) of galaxies from the Sloan Digital Sky Survey (SDSS) main galaxy sample. We have applied our "npt" algorithm to both a volume-limited (36738 galaxies) and magnitude-limited sample (134741 galaxies) of SDSS galaxies, and find consistent results between the two samples, thus confirming the weak luminosity dependence of Q_z recently seen by other authors. We compare our results to other Q_z measurements in the literature and find it to be consistent within the full jack-knife error estimates. However, we find these errors are significantly increased by the presence of the ``Sloan Great Wall'' (at z ~ 0.08) within these two SDSS datasets, which changes the 3-point correlation function (3PCF) by 70% on large scales (s>=10h^-1 Mpc). If we exclude this supercluster, our observed Q_z is in better agreement with that obtained from the 2dFGRS by other authors, thus demonstrating the sensitivity of these higher-order correlat...

  5. Calculation of the High-Temperature Point Defects Structure in Te-Rich CdTe

    Science.gov (United States)

    Dai, Shujun; Wang, Tao; Liu, Huimin; He, Yihui; Jie, Wanqi

    2016-10-01

    A thermodynamic equilibrium model for CdTe annealed under Te vapor is established, in which possible point defects and a defect reaction existing in undoped and In-doped Te-rich CdTe crystals are taken into consideration. Independent point defects, such as VCd, Cdi, and Tei, as well as defect complexes, namely TeCd-VCd (B complex), {Te}_{{Cd}}^{2 + } - {V}_{{Cd}}^{2 - } (D complex), {In}_{{Cd}}^{ + } - {V}_{{Cd}}^{ - } (A-center) and Tei-VCd (TeCd), are discussed based on the defect chemistry theory. More specially, the mass action law and quasi-chemical equations are used to calculate defects concentration and Fermi level in undoped and doped CdTe crystals with different indium concentrations. It is found that the Fermi level is controlled by a {V}_{{Cd}}^{2 - } , TeCd, and B/D-complex in undoped crystal. The concentration of VCd drops down in an obvious manner and that of TeCd rises for doped crystal with increasing [In].

  6. An Optimized Structure on FPGA of Key Point Detection in SIFT Algorithm

    Directory of Open Access Journals (Sweden)

    Xu Chenyu

    2016-01-01

    Full Text Available SIFT algorithm is the most efficient and powerful algorithm to describe the features of images and it has been applied in many fields. In this paper, we propose an optimized method to realize the hardware implementation of the SIFT algorithm. We mainly discuss the structure of Data Generation here. A pipeline architecture is introduced to accelerate this optimized system. Parameters’ setting and approximation’s controlling in different image qualities and hardware resources are the focus of this paper. The results of experiments fully prove that this structure is real-time and effective, and provide consultative opinion to meet the different situations.

  7. Best Entry Points for Structured Document Retrieval - Part II: Types, Usage and Effectiveness

    DEFF Research Database (Denmark)

    Reid, Jane; Lalmas, Mounia; Finesilver, Karen

    2006-01-01

    Structured document retrieval makes use of document components as the basis of the retrieval process, rather than complete documents. The inherent relationships between these components make it vital to support users' natural browsing behaviour in order to offer effective and efficient access...... and effectiveness in real information search tasks....

  8. Investigation of point triangulation methods for optimality and performance in Structure from Motion systems

    DEFF Research Database (Denmark)

    an overview of existing triangulation methods with emphasis on performance versus optimality, and will suggest a fast triangulation algorithm based on linear constraints. The structure and camera motion estimation in a SFM system is based on the minimization of some norm of the reprojection error between...

  9. Development of an ultrasound microscope combined with optical microscope for multiparametric characterization of a single cell.

    Science.gov (United States)

    Arakawa, Mototaka; Shikama, Joe; Yoshida, Koki; Nagaoka, Ryo; Kobayashi, Kazuto; Saijo, Yoshifumi

    2015-09-01

    Biomechanics of the cell has been gathering much attention because it affects the pathological status in atherosclerosis and cancer. In the present study, an ultrasound microscope system combined with optical microscope for characterization of a single cell with multiple ultrasound parameters was developed. The central frequency of the transducer was 375 MHz and the scan area was 80 × 80 μm with up to 200 × 200 sampling points. An inverted optical microscope was incorporated in the design of the system, allowing for simultaneous optical observations of cultured cells. Two-dimensional mapping of multiple ultrasound parameters, such as sound speed, attenuation, and acoustic impedance, as well as the thickness, density, and bulk modulus of specimen/cell under investigation, etc., was realized by the system. Sound speed and thickness of a 3T3-L1 fibroblast cell were successfully obtained by the system. The ultrasound microscope system combined with optical microscope further enhances our understanding of cellular biomechanics.

  10. A comparison of interest point and region detectors on structured, range and texture images

    DEFF Research Database (Denmark)

    Kazmi, Wajahat; Andersen, Hans Jørgen

    2015-01-01

    )) and corner based detectors (such as Hessian and Harris with both Affine/Laplace variants, SURF with determinant of Hessian based corners and SIFT with difference of Gaussians) acquired more than 90% mean average precision, whereas on range images, homogeneous region detector did not work well. TLR offered...... and textured images. It is also shown that in a bi-channel approach, combining surface and edge regions (MSER and TLR) boosts the overall performance. Among the descriptors, SIFT and SURF generally offer higher performance but low dimensional descriptors such as Steerable Filters follow closely.......This article presents an evaluation of the image retrieval and classification potential of local features. Several affine invariant region and scale invariant interest point detectors in combination with well known descriptors were evaluated. Tests on building, range and texture databases were...

  11. A Modal Model to Simulate Typical Structural Dynamic Nonlinearity [PowerPoint

    Energy Technology Data Exchange (ETDEWEB)

    Mayes, Randall L.; Pacini, Benjamin Robert; Roettgen, Dan

    2016-01-01

    Some initial investigations have been published which simulate nonlinear response with almost traditional modal models: instead of connecting the modal mass to ground through the traditional spring and damper, a nonlinear Iwan element was added. This assumes that the mode shapes do not change with amplitude and there are no interactions between modal degrees of freedom. This work expands on these previous studies. An impact experiment is performed on a structure which exhibits typical structural dynamic nonlinear response, i.e. weak frequency dependence and strong damping dependence on the amplitude of vibration. Use of low level modal test results in combination with high level impacts are processed using various combinations of modal filtering, the Hilbert Transform and band-pass filtering to develop response data that are then fit with various nonlinear elements to create a nonlinear pseudo-modal model. Simulations of forced response are compared with high level experimental data for various nonlinear element assumptions.

  12. Characterization of Piezoresistive PEDOT:PSS Pressure Sensors with Inter-Digitated and Cross-Point Electrode Structures

    Directory of Open Access Journals (Sweden)

    Jer-Chyi Wang

    2015-01-01

    Full Text Available The piezoresistive characteristics of poly(3,4-ethylenedioxythiophene:polystyrene sulfonate (PEDOT:PSS pressure sensors with inter-digitated (IDE and cross-point electrode (CPE structures have been investigated. A small variation of the resistance of the pressure sensors with IDE without bottom indium-tin-oxide (b-ITO film and with CPE structures was observed owing to the single carrier-conducting pathway. For the IDE pressure sensors with b-ITO, the piezoresistive characteristics at low and high pressure were similar to those of the pressure sensors with IDE without b-ITO and with CPE structures, respectively, leading to increased piezoresistive pressure sensitivity as the PEDOT:PSS film thickness decreased. A maximum sensitivity of more than 42 kΩ/Pa was achieved. When the normal pressure was applied, the increased number of conducting points or the reduced distance between the PEDOT oligomers within the PEDOT:PSS film resulted in a decrease of the resistance. The piezoresistive pressure sensors with a single carrier-conducting pathway, i.e., IDE without b-ITO and CPE structures, exhibited a small relaxation time and a superior reversible operation, which can be advantageous for fast piezoresistive response applications.

  13. Moments of structure functions for $N_f=2$ near the physical point

    CERN Document Server

    Bali, G S; Gläßle, B; Göckeler, M; Najjar, J; Rödl, R; Schäfer, A; Schiel, R; Sternbeck, A; Söldner, W

    2013-01-01

    We report on our on-going study of the lower moments of iso-vector polarised and unpolarised structure functions, $g_A$ and $\\langle x\\rangle_{u-d}$, respectively, and the iso-vector scalar and tensor charge, for $N_f=2$ non-perturbatively improved clover fermions. With pion masses which go down to about 150 MeV, we investigate finite volume effects and excited state contributions.

  14. Disturbed subsurface microbial communities follow equivalent trajectories despite different structural starting points

    Energy Technology Data Exchange (ETDEWEB)

    Handley, Kim M.; Wrighton, Kelly C.; Miller, Christopher S.; Wilkins, Michael J.; Kantor, Rose S.; Thomas, Brian C.; Williams, Kenneth H.; Gilbert, Jack A.; Long, Philip E.; Banfield, Jillian F.

    2015-03-01

    We explored the impact of the starting community composition and structure on ecosystem response to perturbations using organic carbon amendment experiments. Subsurface sediment was partitioned into flow-through columns, and the microbial communities were initially stimulated in situ by addition of acetate as a carbon and electron donor source. This drove community richness and evenness down, and pushed the system into a new biogeochemical state characterized by iron reduction. Reconstructed near-full-length 16S rRNA gene sequence analysis indicated a concomitant enrichment of Desulfuromonadales, Comamonadaceae and Bacteroidetes lineages. After 10 to 12 days, acetate was exchange for lactate in a subset of columns. Following the clear onset of sulfate reduction (35 days after acetate-amendment), acetate was substituted for lactate in additional columns. Acetatestimulated communities differed markedly during each biogeochemical regime and at each lactate-switch. Regardless, however, of when communities were switched to lactate, they followed comparable trajectories with respect to composition and structure, with convergence evident one week after each switch, and marked after one month of lactate amendment. During sulfate reduction all treatments were enriched in Firmicutes and a number of species likely involved in sulfate reduction (notably Desulfobulbus, Desulfosporosinus, Desulfitobacterium and Desulfotomaculum). Lactate treatments were distinguished by substantially lower relative abundances of Desulfotomaculum and Bacteroidetes, and enrichments of Psychrosinus and Clostridiales species. Results imply that the structure of the starting community was not significant in controlling organism selection in community succession.

  15. Superlensing Microscope Objective Lens

    CERN Document Server

    Yan, Bing; Parker, Alan; Lai, Yukun; Thomas, John; Yue, Liyang; Monks, James

    2016-01-01

    Conventional microscope objective lenses are diffraction limited, which means that they cannot resolve features smaller than half the illumination wavelength. Under white light illumination, such resolution limit is about 250-300 nm for an ordinary microscope. In this paper, we demonstrate a new superlensing objective lens which has a resolution of about 100 nm, offering at least two times resolution improvement over conventional objectives in resolution. This is achieved by integrating a conventional microscope objective lens with a superlensing microsphere lens using a 3D printed lens adaptor. The new objective lens was used for label-free super-resolution imaging of 100 nm-sized engineering and biological samples, including a Blu-ray disc sample, semiconductor chip and adenoviruses. Our work creates a solid base for developing a commercially-viable superlens prototype, which has potential to transform the field of optical microscopy and imaging.

  16. Integrated elastic microscope device

    Science.gov (United States)

    Lee, W. M.; Wright, D.; Watkins, R.; Cen, Zi

    2015-03-01

    The growing power of imaging and computing power of smartphones is creating the possibility of converting your smartphone into a high power pocket microscopy system. High quality miniature microscopy lenses attached to smartphone are typically made with glass or plastics that can only be produce at low cost with high volume. To revise the paradigm of microscope lenses, we devised a simple droplet lens fabrication technique that which produces low cost and high performance lens. Each lens is integrated into thin 3-D printed holder with complimentary light emitted diode (LEDs) that clips onto majority of smartphones. The integrated device converts a smartphone into a high power optical microscope/dermatoscope at around $2. This low cost device has wide application in a multitude of practical uses such as material inspection, dermascope and educational microscope.

  17. A multi-scale point of view on the structure-property relationships of A15 superconductors

    Institute of Scientific and Technical Information of China (English)

    Yanlong Ding; Min Pan; Shuiquan Deng; Yong Zhao

    2014-01-01

    Nb3Sn and other A15 members have been widely applied in nuclear power, nuclear magnetic reso-nance, and high-energy particle accelerators for their high critical current density (Jc) and upper critical field (Bc2). There have been comprehensive and intensive studies on the applications, the fundamental lattice dynamic and electronic properties, etc., of A15 superconductors. Various reviews on the preparations, structures, and properties have already been written in the last few years. Nevertheless, on account of the large amount of existing facts and views, a coherent view on the relations between the structures and properties has not appeared to unify the facts. This article sketches a multi-scale point of view on the relations between the multi-scale structures and the corresponding properties.

  18. Bulk and interfacial molecular structure near liquid-liquid critical points

    Energy Technology Data Exchange (ETDEWEB)

    Manzanares-Papayanopoulos, Emilio

    2000-09-01

    Critical behaviour occurs when two coexisting phases merge identity without abrupt change in physical properties. The detail of this behaviour is nowadays considered universal, being dominated by the divergence of the correlation length {xi}. Following this universality, the detailed behaviour can be studied experimentally using any convenient system. For that reason, the study of fluids, and in particular fluid mixtures, offers a useful platform since critical behaviour in such systems can often be studied at convenient temperatures and pressures. Although criticality is a consequence of the divergence of {xi}, and so in a sense is a large-scale phenomenon, nevertheless it has an influence on events at molecular level. This aspect of criticality has received relatively little study compared to the enormous effort expended over the past thirty years in elucidating the macroscopic or phenomenological aspects of criticality. The signature of criticality at molecular level is the central theme running through this research.The aim of the work described in this thesis was to investigate the surface and transport properties of near-critical binary liquid mixtures. The surface properties mainly concerned the adsorption and wetting behaviour at the vapour-liquid and liquid-solid interfaces. The transport property studied was the shear viscosity at bulk or macroscopic level and the corresponding property at molecular or microscopic level, the micro viscosity. The work presented in this thesis comprises the experimental measurements and the theoretical interpretations drawn from the results. The experimental work was varied, using both classical and modern techniques. The theoretical interpretation was used as directed towards validating and comparing the results of the experimental programme with the predictions of the current classical critical-state theories. The systems investigated have been mostly alkane + perfluoroalkane mixtures or mixtures with very similar

  19. Structure and Dynamics of Isolated Internetwork Ca II H Bright Points Observed by Sunrise

    CERN Document Server

    Jafarzadeh, S; Feller, A; Lagg, A; Pietarila, A; Danilovic, S; Riethmüller, T L; Pillet, V Martínez

    2012-01-01

    We aim to improve our picture of the low chromosphere in the quiet-Sun internetwork by investigating the intensity, horizontal velocity, size and lifetime variations of small bright points (BPs; diameter smaller than 0.3 arcsec) observed in the Ca II H 3968 {\\AA} passband along with their magnetic field parameters, derived from photospheric magnetograms. Several high-quality time series of disc-centre, quiet-Sun observations from the Sunrise balloon-borne solar telescope, with spatial resolution of around 100 km on the solar surface, have been analysed to study the dynamics of BPs observed in the Ca II H passband and their dependence on the photospheric vector magnetogram signal. Parameters such as horizontal velocity, diameter, intensity and lifetime histograms of the isolated internetwork and magnetic Ca II H BPs were determined. Mean values were found to be 2.2 km/s, 0.2 arcsec (150 km), 1.48 average Ca II H quiet-Sun and 673 sec, respectively. Interestingly, the brightness and the horizontal velocity of B...

  20. Electron microscope studies

    Energy Technology Data Exchange (ETDEWEB)

    Crewe, A.V.; Kapp, O.H.

    1992-07-01

    This is a report covering the research performed in the Crewe laboratory between 1964 and 1992. Because of limitations of space we have provided relatively brief summaries of the major research directions of the facility during these years. A complete bibliography has been included and we have referenced groups of pertinent publications at the beginning of each section. This report summarizes our efforts to develop better electron microscopes and chronicles many of the experimental programs, in materials science and biology, that acted both as a stimulus to better microscope design and also as a testing ground for many instrumental innovations.

  1. Organic Crystal Engineering of Thermosetting Cyanate Ester Monomers: Influence of Structure on Melting Point

    Science.gov (United States)

    2016-05-27

    heating baseline does show a modest non - linearity due to its nearness to the onset of the wide melting peak. Because we elected not to use heating...Guenthner, Sean M. Ramirez , Michael D. Ford, Denisse Soto, Jerry A. Boatz, Kamran B. Ghiassi and Joseph M. Mabry 5d. PROJECT NUMBER 5e. TASK...longer Si-C bonds for C-C bonds in the monomer chemical structure results in the “unlocking” of new degrees of freedom in non -interlocking molecules

  2. Got Point Clouds: Characterizing Canopy Structure With Active and Passive Sensors

    Science.gov (United States)

    Popescu, S. C.; Malambo, L.; Sheridan, R.; Putman, E.; Murray, S.; Rooney, W.; Rajan, N.

    2016-12-01

    Unmanned Aerial Systems (UAS) provide the means to acquire highly customized aerial data at local scale with a multitude of sensors. UAS allow us to obtain affordably repeated observations of canopy structure for agricultural and natural resources applications by using passive optical sensors, such as cameras and photogrammetric techniques, and active sensors, such as lidar (Light Detection and Ranging). The objectives of this presentation are to: (1) offer a brief overview of UAS used for agriculture and natural resources studies, (2) describe experiences in conducting agriculture phenotyping and forest vegetation measurements, and (3) give details on the methodology developed for image and lidar data processing for characterizing the three dimensional structure of plant canopies. The UAS types used for this purpose included rotary platforms, such as quadcopters, hexacopters, and octocopters, with a payload capacity of up to 19 lbs. The sensors that collected data over two crop seasons include multispectral cameras in the visible color spectrum and near infrared, and UAS-lidar. For ground reference data we used terrestrial lidar scanners and field measurements. Results comparing UAS and terrestrial measurements show high correlation and open new areas of scientific investigation of crop canopies previously not possible with affordable techniques.

  3. Current Structure and Non-Ideal Behavior at Magnetic Null Points in the Turbulent Magnetosheath

    Science.gov (United States)

    Wendel, D. E.; Adrian, M. L.

    2012-12-01

    The Poincaré index indicates the Cluster spacecraft tetrahedron entraps a number of magnetic nulls during an encounter with the turbulent magnetosheath. Previous researchers have found evidence for reconnection at one of the many filamentary current layers observed by Cluster in this region. We find that many of the entrained nulls are also associated with strong currents. We dissect the current structure of a pair of spiral nulls that may be topologically connected. At both nulls, we find a strong current along the spine, accompanied by a modest current perpendicular to the spine that tilts the axis of the spine toward the fan plane. At least one of the nulls manifests a non-ideal rotational flow pattern in the fan plane that is consistent with torsional spine reconnection as predicted by theory. These results emphasize the importance of examining the magnetic topology in interpreting the nature of currents and reconnection in three-dimensional turbulence.

  4. The Structure of n-Point One-Loop Open Superstring Amplitudes

    CERN Document Server

    Mafra, Carlos R

    2014-01-01

    In this article we present the worldsheet integrand for one-loop amplitudes in maximally supersymmetric superstring theory involving any number n of massless open string states. The polarization dependence is organized into the same BRST invariant kinematic combinations which also govern the leading string correction to tree level amplitudes. The dimensions of the bases for both the kinematics and the associated worldsheet integrals is found to be the unsigned Stirling number S_3^{n-1} of first kind. We explain why the same combinatorial structures govern on the one hand finite one-loop amplitudes of equal helicity states in pure Yang Mills theory and on the other hand the color tensors at quadratic alpha prime order of the color dressed tree amplitude.

  5. Vibration Characteristics of a Building Structure from a Natural Frequency Point of View

    Directory of Open Access Journals (Sweden)

    Katsumi Kurita

    2015-05-01

    Full Text Available To investigate vibration characteristics of the building, the natural frequency of the building was estimated using microtoremor and strong motion. In case estimated using microtoremor data, the natural frequency was 2.40Hz in the minor axis of the building. However, in case estimated using strong motion data, the average of them was 2.28Hz that is lower than that of microtremor. From a time series analysis on strong motion data, the natural frequency indicates high value before the part of principal motion, it drops to a lower on the part of principal motion. And it goes back with the decreasing acceleration amplitude of motion. It means that the natural frequency of the structure depends on the peak acceleration amplitude. Therefore, it is difficult to evaluate a health index only using the change of the natural frequency estimated by strong motion data. It means that it needs to use another parameter together.

  6. Microscopic plasma Hamiltonian

    Science.gov (United States)

    Peng, Y.-K. M.

    1974-01-01

    A Hamiltonian for the microscopic plasma model is derived from the Low Lagrangian after the dual roles of the generalized variables are taken into account. The resulting Hamilton equations are shown to agree with the Euler-Lagrange equations of the Low Lagrangian.

  7. Microscope on Mars

    Science.gov (United States)

    2004-01-01

    This image taken at Meridiani Planum, Mars by the panoramic camera on the Mars Exploration Rover Opportunity shows the rover's microscopic imager (circular device in center), located on its instrument deployment device, or 'arm.' The image was acquired on the ninth martian day or sol of the rover's mission.

  8. Microscope on Mars

    Science.gov (United States)

    2004-01-01

    This image taken at Meridiani Planum, Mars by the panoramic camera on the Mars Exploration Rover Opportunity shows the rover's microscopic imager (circular device in center), located on its instrument deployment device, or 'arm.' The image was acquired on the ninth martian day or sol of the rover's mission.

  9. Segmentation of planar surfaces in LiDAR point clouds of an electrical substation by exploring the structure of points neighbourhood

    Science.gov (United States)

    Arastounia, M.; Lichti, D. D.

    2014-06-01

    According to the Department of Energy of the USA, today's electrical distribution system is 97.97% reliable. However, power outages and interruptions still impact many people. Many power outages are caused by animals coming into contact with the conductive elements of the electrical substations. This can be prevented by covering the conductive electrical objects with insulating materials. The design of these custom-built insulating covers requires a 3D as-built plan of the substation. This research aims to develop automated methods to create such a 3D as-built plan using terrestrial LiDAR data for which objects first need to be recognized in the LiDAR point clouds. This paper reports on the application of a new algorithm for the segmentation of planar surfaces found at electrical substations. The proposed approach is a region growing method that aggregates points based on their proximity to each other and their neighbourhood dispersion direction. PCA (principal components analysis) is also employed to segment planar surfaces in the electrical substation. In this research two different laser scanners, Leica HDS 6100 and Faro Focus3D, were utilized to scan an electrical substation in Airdrie, a city located in north of Calgary, Canada. In this research, three subsets incorporating one subset of Leica dataset with approximately 1.7 million points and two subsets of the Faro dataset with 587 and 79 thousand points were utilized. The performance of our proposed method is compared with the performance of PCA by performing check point analysis and investigation of computational speed. Both methods managed to detect a great proportion of planar points (about 70%). However, the proposed method slightly outperformed PCA. 95% of the points that were segmented by both methods as planar points did actually lie on a planar surface. This exhibits the high ability of both methods to identify planar points. The results also indicate that the computational speed of our method is

  10. Vertically aligned nanostructure scanning probe microscope tips

    Science.gov (United States)

    Guillorn, Michael A.; Ilic, Bojan; Melechko, Anatoli V.; Merkulov, Vladimir I.; Lowndes, Douglas H.; Simpson, Michael L.

    2006-12-19

    Methods and apparatus are described for cantilever structures that include a vertically aligned nanostructure, especially vertically aligned carbon nanofiber scanning probe microscope tips. An apparatus includes a cantilever structure including a substrate including a cantilever body, that optionally includes a doped layer, and a vertically aligned nanostructure coupled to the cantilever body.

  11. Current structure and nonideal behavior at magnetic null points in the turbulent magnetosheath

    Science.gov (United States)

    Wendel, D. E.; Adrian, M. L.

    2013-04-01

    The Poincaré index indicates that the Cluster spacecraft tetrahedron entraps a number of 3-D magnetic nulls during an encounter with the turbulent magnetosheath. Previous researchers have found evidence for reconnection at one of the many filamentary current layers observed by Cluster in this region. We find that many of the entrained nulls are also associated with strong currents. We dissect the current structure of a pair of spiral nulls that may be topologically connected. At both nulls, we find a strong current along the spine, accompanied by a somewhat more modest current perpendicular to the spine that tilts the fan toward the axis of the spine. The current along the fan is comparable to the that along the spine. At least one of the nulls manifests a rotational flow pattern in the fan plane that is consistent with torsional spine reconnection as predicted by theory. These results emphasize the importance of examining the magnetic topology in interpreting the nature of currents and reconnection in 3-D turbulence.

  12. Structural stability of human protein tyrosine phosphatase ρ catalytic domain: effect of point mutations.

    Directory of Open Access Journals (Sweden)

    Alessandra Pasquo

    Full Text Available Protein tyrosine phosphatase ρ (PTPρ belongs to the classical receptor type IIB family of protein tyrosine phosphatase, the most frequently mutated tyrosine phosphatase in human cancer. There are evidences to suggest that PTPρ may act as a tumor suppressor gene and dysregulation of Tyr phosphorylation can be observed in diverse diseases, such as diabetes, immune deficiencies and cancer. PTPρ variants in the catalytic domain have been identified in cancer tissues. These natural variants are nonsynonymous single nucleotide polymorphisms, variations of a single nucleotide occurring in the coding region and leading to amino acid substitutions. In this study we investigated the effect of amino acid substitution on the structural stability and on the activity of the membrane-proximal catalytic domain of PTPρ. We expressed and purified as soluble recombinant proteins some of the mutants of the membrane-proximal catalytic domain of PTPρ identified in colorectal cancer and in the single nucleotide polymorphisms database. The mutants show a decreased thermal and thermodynamic stability and decreased activation energy relative to phosphatase activity, when compared to wild- type. All the variants show three-state equilibrium unfolding transitions similar to that of the wild- type, with the accumulation of a folding intermediate populated at ~4.0 M urea.

  13. Current Structure and Nonideal Behavior at Magnetic Null Points in the Turbulent Magnetosheath

    Science.gov (United States)

    Wendel, D. E.; Adrian, M. L.

    2013-01-01

    The Poincaré index indicates that the Cluster spacecraft tetrahedron entraps a number of 3-D magnetic nulls during an encounter with the turbulent magnetosheath. Previous researchers have found evidence for reconnection at one of the many filamentary current layers observed by Cluster in this region. We find that many of the entrained nulls are also associated with strong currents. We dissect the current structure of a pair of spiral nulls that may be topologically connected. At both nulls, we find a strong current along the spine, accompanied by a somewhat more modest current perpendicular to the spine that tilts the fan toward the axis of the spine. The current along the fan is comparable to the that along the spine. At least one of the nulls manifests a rotational flow pattern in the fan plane that is consistent with torsional spine reconnection as predicted by theory. These results emphasize the importance of examining the magnetic topology in interpreting the nature of currents and reconnection in 3-D turbulence.

  14. In vivo observation of age-related structural changes of dermal collagen in human facial skin using collagen-sensitive second harmonic generation microscope equipped with 1250-nm mode-locked Cr:Forsterite laser

    Science.gov (United States)

    Yasui, Takeshi; Yonetsu, Makoto; Tanaka, Ryosuke; Tanaka, Yuji; Fukushima, Shu-ichiro; Yamashita, Toyonobu; Ogura, Yuki; Hirao, Tetsuji; Murota, Hiroyuki; Araki, Tsutomu

    2013-03-01

    In vivo visualization of human skin aging is demonstrated using a Cr:Forsterite (Cr:F) laser-based, collagen-sensitive second harmonic generation (SHG) microscope. The deep penetration into human skin, as well as the specific sensitivity to collagen molecules, achieved by this microscope enables us to clearly visualize age-related structural changes of collagen fiber in the reticular dermis. Here we investigated intrinsic aging and/or photoaging in the male facial skin. Young subjects show dense distributions of thin collagen fibers, whereas elderly subjects show coarse distributions of thick collagen fibers. Furthermore, a comparison of SHG images between young and elderly subjects with and without a recent life history of excessive sun exposure show that a combination of photoaging with intrinsic aging significantly accelerates skin aging. We also perform image analysis based on two-dimensional Fourier transformation of the SHG images and extracted an aging parameter for human skin. The in vivo collagen-sensitive SHG microscope will be a powerful tool in fields such as cosmeceutical sciences and anti-aging dermatology.

  15. Comprehension of argument structure and semantic roles: evidence from English-learning children and the forced-choice pointing paradigm.

    Science.gov (United States)

    Noble, Claire H; Rowland, Caroline F; Pine, Julian M

    2011-07-01

    Research using the intermodal preferential looking paradigm (IPLP) has consistently shown that English-learning children aged 2 can associate transitive argument structure with causal events. However, studies using the same methodology investigating 2-year-old children's knowledge of the conjoined agent intransitive and semantic role assignment have reported inconsistent findings. The aim of the present study was to establish at what age English-learning children have verb-general knowledge of both transitive and intransitive argument structure using a new method: the forced-choice pointing paradigm. The results suggest that young 2-year-olds can associate transitive structures with causal (or externally caused) events and can use transitive structure to assign agent and patient roles correctly. However, the children were unable to associate the conjoined agent intransitive with noncausal events until aged 3;4. The results confirm the pattern from previous IPLP studies and indicate that children may develop the ability to comprehend different aspects of argument structure at different ages. The implications for theories of language acquisition and the nature of the language acquisition mechanism are discussed.

  16. Designs for a Quantum Electron Microscope

    CERN Document Server

    Kruit, Pieter; Kim, Chung-Soo; Yang, Yujia; Manfrinato, Vitor R; Hammer, Jacob; Thomas, Sebastian; Weber, Philipp; Klopfer, Brannon; Kohstall, Christoph; Juffmann, Thomas; Kasevich, Mark A; Hommelhoff, Peter; Berggren, Karl K

    2015-01-01

    One of the astounding consequences of quantum mechanics is that it allows the detection of a target using an incident probe, with only a low probability of interaction of the probe and the target. This 'quantum weirdness' could be applied in the field of electron microscopy to generate images of beam-sensitive specimens with substantially reduced damage to the specimen. A reduction of beam-induced damage to specimens is especially of great importance if it can enable imaging of biological specimens with atomic resolution. Following a recent suggestion that interaction-free measurements are possible with electrons, we now analyze the difficulties of actually building an atomic resolution interaction-free electron microscope, or "quantum electron microscope". A quantum electron microscope would require a number of unique components not found in conventional transmission electron microscopes. These components include a coherent electron-beam splitter or two-state-coupler, and a resonator structure to allow each ...

  17. A pragmatic guide to multiphoton microscope design.

    Science.gov (United States)

    Young, Michael D; Field, Jeffrey J; Sheetz, Kraig E; Bartels, Randy A; Squier, Jeff

    2015-06-30

    Multiphoton microscopy has emerged as a ubiquitous tool for studying microscopic structure and function across a broad range of disciplines. As such, the intent of this paper is to present a comprehensive resource for the construction and performance evaluation of a multiphoton microscope that will be understandable to the broad range of scientific fields that presently exploit, or wish to begin exploiting, this powerful technology. With this in mind, we have developed a guide to aid in the design of a multiphoton microscope. We discuss source selection, optical management of dispersion, image-relay systems with scan optics, objective-lens selection, single-element light-collection theory, photon-counting detection, image rendering, and finally, an illustrated guide for building an example microscope.

  18. Microscopic instability in recurrent neural networks

    Science.gov (United States)

    Yamanaka, Yuzuru; Amari, Shun-ichi; Shinomoto, Shigeru

    2015-03-01

    In a manner similar to the molecular chaos that underlies the stable thermodynamics of gases, a neuronal system may exhibit microscopic instability in individual neuronal dynamics while a macroscopic order of the entire population possibly remains stable. In this study, we analyze the microscopic stability of a network of neurons whose macroscopic activity obeys stable dynamics, expressing either monostable, bistable, or periodic state. We reveal that the network exhibits a variety of dynamical states for microscopic instability residing in a given stable macroscopic dynamics. The presence of a variety of dynamical states in such a simple random network implies more abundant microscopic fluctuations in real neural networks which consist of more complex and hierarchically structured interactions.

  19. The Structure of the Solar Core: an Observer's Point of View

    Science.gov (United States)

    Appourchaux, T.

    Since the beginning of helioseismology, most of the internal and dynamics structure of the Sun has been revealed or so we thought. The last island where our powerful tools start to fail is the solar core, where nuclear reactions take place. With the advent of SOHO and GONG, we have now a quality of helioseismic data without precedence that should enable us to understand better the physics of the deepest solar regions. This goal can be partially achieved by measuring low-degree rotational splitting of p-modes, and by detecting the elusive g-modes. In a first part, I will review the fitting techniques that are being used for inferring the rotational splittings of low-degree p-modes. I will particularly focus on Fourier spectra fitting developped by Schou (1992) and refined by Appourchaux et al (1998). I will show how one can visualize from the data, the leakage matrix and how one can clean the data from the mode leakages. I will give examples of systematic errors introduced by the leakage matrix and by modes of aliasing degrees. I will also compare the Fourier spectra fitting technique to others techniques that use power spectra. I will give some recent results from SOHO and GONG. In a second part, I will report on the progress of the Phoebus group for detecting g-modes. The Phoebus group is composed of team members of BiSON, VIRGO and SOI/MDI. I will summarize some of the techniques we used for finding g-modes, and how one can use those for finding low-order low-frequency p-modes. I will, most probably, not report on g-mode detection but most likely stress that the future ahead of us is brighter than ever.

  20. [Remote Slit Lamp Microscope Consultation System Based on Web].

    Science.gov (United States)

    Chen, Junfa; Zhuo, Yong; Liu, Zuguo; Chen, Yanping

    2015-11-01

    To realize the remote operation of the slit lamp microscope for department of ophthalmology consultation, and visual display the real-time status of remote slit lamp microscope, a remote slit lamp microscope consultation system based on B/S structure is designed and implemented. Through framing the slit lamp microscope on the website system, the realtime acquisition and transmission of remote control and image data is realized. The three dimensional model of the slit lamp microscope is established and rendered on the web by using WebGL technology. The practical application results can well show the real-time interactive of the remote consultation system.

  1. An innovative approach in microscopic endodontics

    Science.gov (United States)

    Mittal, Sunandan; Kumar, Tarun; Sharma, Jyotika; Mittal, Shifali

    2014-01-01

    The introduction of the dental operating microscope was a turning point in the history of dentistry. It triggered a rapid transition from the conventional world of macro-dentistry to the precise, detailed world of micro-dentistry. However, working at these higher-power magnifications brings the clinician into the realm where even slight hand movements are disruptive. Physiologic hand tremor is a problem resulting in difficulty in mouth mirror placement. Hence, in this paper, a new instrument was designed to overcome the drawback of hand tremors during microscopic endodontics. PMID:24944459

  2. An innovative approach in microscopic endodontics

    Directory of Open Access Journals (Sweden)

    Sunandan Mittal

    2014-01-01

    Full Text Available The introduction of the dental operating microscope was a turning point in the history of dentistry. It triggered a rapid transition from the conventional world of macro-dentistry to the precise, detailed world of micro-dentistry. However, working at these higher-power magnifications brings the clinician into the realm where even slight hand movements are disruptive. Physiologic hand tremor is a problem resulting in difficulty in mouth mirror placement. Hence, in this paper, a new instrument was designed to overcome the drawback of hand tremors during microscopic endodontics.

  3. Correlation analysis of couple optical paths for microstereovision with stereo light microscope

    Institute of Scientific and Technical Information of China (English)

    WANG Yuezong; LI Desheng; YU Yaping

    2007-01-01

    A micro stereovision system with a stereo light microscope (SLM) has been applied in micromanipulation systems.There is a coupling connection between two optical paths of a stereo light microscope.The coupling intension corresponds with two factors:the structure of an SLM and the position of an object point in the view of an SLM.In this paper,a correlation function is proposed to describe the coupling intension between the couple optical paths of an SLM.The quantified results are applied to the error analysis of the imaging model.Experiments show that the correlation of the optical paths of a common main objective of stereo light microscope (CMO-SLM) is little more than that of a G-SLM,and the error must be considered when a pinhole imaging model is used to analyze its correlation.

  4. Anisotropic Contrast Optical Microscope

    CERN Document Server

    Peev, D; Kananizadeh, N; Wimer, S; Rodenhausen, K B; Herzinger, C M; Kasputis, T; Pfaunmiller, E; Nguyen, A; Korlacki, R; Pannier, A; Li, Y; Schubert, E; Hage, D; Schubert, M

    2016-01-01

    An optical microscope is described that reveals contrast in the Mueller matrix images of a thin, transparent or semi-transparent specimen located within an anisotropic object plane (anisotropic filter). The specimen changes the anisotropy of the filter and thereby produces contrast within the Mueller matrix images. Here we use an anisotropic filter composed of a semi-transparent, nanostructured thin film with sub-wavelength thickness placed within the object plane. The sample is illuminated as in common optical microscopy but the light is modulated in its polarization using combinations of linear polarizers and phase plate (compensator) to control and analyze the state of polarization. Direct generalized ellipsometry data analysis approaches permit extraction of fundamental Mueller matrix object plane images dispensing with the need of Fourier expansion methods. Generalized ellipsometry model approaches are used for quantitative image analyses. We demonstrate the anisotropic contrast optical microscope by mea...

  5. Femtosecond scanning tunneling microscope

    Energy Technology Data Exchange (ETDEWEB)

    Taylor, A.J.; Donati, G.P.; Rodriguez, G.; Gosnell, T.R.; Trugman, S.A.; Some, D.I.

    1998-11-01

    This is the final report of a three-year, Laboratory Directed Research and Development (LDRD) project at the Los Alamos National Laboratory (LANL). By combining scanning tunneling microscopy with ultrafast optical techniques we have developed a novel tool to probe phenomena on atomic time and length scales. We have built and characterized an ultrafast scanning tunneling microscope in terms of temporal resolution, sensitivity and dynamic range. Using a novel photoconductive low-temperature-grown GaAs tip, we have achieved a temporal resolution of 1.5 picoseconds and a spatial resolution of 10 nanometers. This scanning tunneling microscope has both cryogenic and ultra-high vacuum capabilities, enabling the study of a wide range of important scientific problems.

  6. Microscopic Halftone Image Segmentation

    Institute of Scientific and Technical Information of China (English)

    WANG Yong-gang; YANG Jie; DING Yong-sheng

    2004-01-01

    Microscopic halftone image recognition and analysis can provide quantitative evidence for printing quality control and fault diagnosis of printing devices, while halftone image segmentation is one of the significant steps during the procedure. Automatic segmentation on microscopic dots by the aid of the Fuzzy C-Means (FCM) method that takes account of the fuzziness of halftone image and utilizes its color information adequately is realized. Then some examples show the technique effective and simple with better performance of noise immunity than some usual methods. In addition, the segmentation results obtained by the FCM in different color spaces are compared, which indicates that the method using the FCM in the f1f2f3 color space is superior to the rest.

  7. Color Laser Microscope

    Science.gov (United States)

    Awamura, D.; Ode, T.; Yonezawa, M.

    1987-04-01

    A color laser microscope utilizing a new color laser imaging system has been developed for the visual inspection of semiconductors. The light source, produced by three lasers (Red; He-Ne, Green; Ar, Blue; He-Cd), is deflected horizontally by an AOD (Acoustic Optical Deflector) and vertically by a vibration mirror. The laser beam is focused in a small spot which is scanned over the sample at high speed. The light reflected back from the sample is reformed to contain linear information by returning to the original vibration mirror. The linear light is guided to the CCD image sensor where it is converted into a video signal. Individual CCD image sensors are used for each of the three R, G, or B color image signals. The confocal optical system with its laser light source yields a color TV monitor image with no flaring and a much sharper resolution than that of the conventional optical microscope. The AOD makes possible a high speed laser scan and a NTSC or PAL TV video signal is produced in real time without any video memory. Since the light source is composed of R, G, and B laser beams, color separation superior to that of white light illumination is achieved. Because of the photometric linearity of the image detector, the R, G, and B outputs of the system are most suitably used for hue analysis. The CCD linear image sensors in the optical system produce no geometrical distortion, and good color registration is available principally. The output signal can be used for high accuracy line width measuring. The many features of the color laser microscope make it ideally suited for the visual inspection of semiconductor processing. A number of these systems have already been installed in such a capacity. The Color Laser Microscope can also be a very useful tool for the fields of material engineering and biotechnology.

  8. Microscopic enteritis: Bucharest consensus.

    Science.gov (United States)

    Rostami, Kamran; Aldulaimi, David; Holmes, Geoffrey; Johnson, Matt W; Robert, Marie; Srivastava, Amitabh; Fléjou, Jean-François; Sanders, David S; Volta, Umberto; Derakhshan, Mohammad H; Going, James J; Becheanu, Gabriel; Catassi, Carlo; Danciu, Mihai; Materacki, Luke; Ghafarzadegan, Kamran; Ishaq, Sauid; Rostami-Nejad, Mohammad; Peña, A Salvador; Bassotti, Gabrio; Marsh, Michael N; Villanacci, Vincenzo

    2015-03-07

    Microscopic enteritis (ME) is an inflammatory condition of the small bowel that leads to gastrointestinal symptoms, nutrient and micronutrient deficiency. It is characterised by microscopic or sub-microscopic abnormalities such as microvillus changes and enterocytic alterations in the absence of definite macroscopic changes using standard modern endoscopy. This work recognises a need to characterize disorders with microscopic and submicroscopic features, currently regarded as functional or non-specific entities, to obtain further understanding of their clinical relevance. The consensus working party reviewed statements about the aetiology, diagnosis and symptoms associated with ME and proposes an algorithm for its investigation and treatment. Following the 5(th) International Course in Digestive Pathology in Bucharest in November 2012, an international group of 21 interested pathologists and gastroenterologists formed a working party with a view to formulating a consensus statement on ME. A five-step agreement scale (from strong agreement to strong disagreement) was used to score 21 statements, independently. There was strong agreement on all statements about ME histology (95%-100%). Statements concerning diagnosis achieved 85% to 100% agreement. A statement on the management of ME elicited agreement from the lowest rate (60%) up to 100%. The remaining two categories showed general agreement between experts on clinical presentation (75%-95%) and pathogenesis (80%-90%) of ME. There was strong agreement on the histological definition of ME. Weaker agreement on management indicates a need for further investigations, better definitions and clinical trials to produce quality guidelines for management. This ME consensus is a step toward greater recognition of a significant entity affecting symptomatic patients previously labelled as non-specific or functional enteropathy.

  9. Microscopic Theory of Supercapacitors

    Science.gov (United States)

    Skinner, Brian Joseph

    As new energy technologies are designed and implemented, there is a rising demand for improved energy storage devices. At present the most promising class of these devices is the electric double-layer capacitor (EDLC), also known as the supercapacitor. A number of recently created supercapacitors have been shown to produce remarkably large capacitance, but the microscopic mechanisms that underlie their operation remain largely mysterious. In this thesis we present an analytical, microscopic-level theory of supercapacitors, and we explain how such large capacitance can result. Specifically, we focus on four types of devices that have been shown to produce large capacitance. The first is a capacitor composed of a clean, low-temperature two-dimensional electron gas adjacent to a metal gate electrode. Recent experiments have shown that such a device can produce capacitance as much as 40% larger than that of a conventional plane capacitor. We show that this enhanced capacitance can be understood as the result of positional correlations between electrons and screening by the gate electrode in the form of image charges. Thus, the enhancement of the capacitance can be understood primarily as a classical, electrostatic phenomenon. Accounting for the quantum mechanical properties of the electron gas provides corrections to the classical theory, and these are discussed. We also present a detailed numerical calculation of the capacitance of the system based on a calculation of the system's ground state energy using the variational principle. The variational technique that we develop is broadly applicable, and we use it here to make an accurate comparison to experiment and to discuss quantitatively the behavior of the electrons' correlation function. The second device discussed in this thesis is a simple EDLC composed of an ionic liquid between two metal electrodes. We adopt a simple description of the ionic liquid and show that for realistic parameter values the capacitance

  10. Virtual pinhole confocal microscope

    Energy Technology Data Exchange (ETDEWEB)

    George, J.S.; Rector, D.M.; Ranken, D.M. [Los Alamos National Lab., NM (United States). Biophysics Group; Peterson, B. [SciLearn Inc. (United States); Kesteron, J. [VayTech Inc. (United States)

    1999-06-01

    Scanned confocal microscopes enhance imaging capabilities, providing improved contrast and image resolution in 3-D, but existing systems have significant technical shortcomings and are expensive. Researchers at Los Alamos National Laboratory have developed a novel approach--virtual pinhole confocal microscopy--that uses state of the art illumination, detection, and data processing technologies to produce an imager with a number of advantages: reduced cost, faster imaging, improved efficiency and sensitivity, improved reliability and much greater flexibility. Work at Los Alamos demonstrated proof of principle; prototype hardware and software have been used to demonstrate technical feasibility of several implementation strategies. The system uses high performance illumination, patterned in time and space. The authors have built functional confocal imagers using video display technologies (LCD or DLP) and novel scanner based on a micro-lens array. They have developed a prototype system for high performance data acquisition and processing, designed to support realtime confocal imaging. They have developed algorithms to reconstruct confocal images from a time series of spatially sub-sampled images; software development remains an area of active development. These advances allow the collection of high quality confocal images (in fluorescence, reflectance and transmission modes) with equipment that can inexpensively retrofit to existing microscopes. Planned future extensions to these technologies will significantly enhance capabilities for microscopic imaging in a variety of applications, including confocal endoscopy, and confocal spectral imaging.

  11. Thimble microscope system

    Science.gov (United States)

    Kamal, Tahseen; Rubinstein, Jaden; Watkins, Rachel; Cen, Zijian; Kong, Gary; Lee, W. M.

    2016-12-01

    Wearable computing devices, e.g. Google Glass, Smart watch, embodies the new human design frontier, where technology interfaces seamlessly with human gestures. During examination of any subject in the field (clinic, surgery, agriculture, field survey, water collection), our sensory peripherals (touch and vision) often go hand-in-hand. The sensitivity and maneuverability of the human fingers are guided with tight distribution of biological nerve cells, which perform fine motor manipulation over a range of complex surfaces that is often out of sight. Our sight (or naked vision), on the other hand, is generally restricted to line of sight that is ill-suited to view around corner. Hence, conventional imaging methods are often resort to complex light guide designs (periscope, endoscopes etc) to navigate over obstructed surfaces. Using modular design strategies, we constructed a prototype miniature microscope system that is incorporated onto a wearable fixture (thimble). This unique platform allows users to maneuver around a sample and take high resolution microscopic images. In this paper, we provide an exposition of methods to achieve a thimble microscopy; microscope lens fabrication, thimble design, integration of miniature camera and liquid crystal display.

  12. Microscopic features of moving traffic jams.

    Science.gov (United States)

    Kerner, Boris S; Klenov, Sergey L; Hiller, Andreas; Rehborn, Hubert

    2006-04-01

    Empirical and numerical microscopic features of moving traffic jams are presented. Based on a single vehicle data analysis, it is found that within wide moving jams, i.e., between the upstream and downstream jam fronts there is a complex microscopic spatiotemporal structure. This jam structure consists of alternations of regions in which traffic flow is interrupted and flow states of low speeds associated with "moving blanks" within the jam. Moving blanks within a wide moving jam resemble electron holes in the valence band of semiconductors: As the moving blanks that propagate upstream appear due to downstream vehicle motion within the jam, so appearance of electron holes moving with the electric field results from electron motion against the electric field in the valence band of semiconductors. Empirical features of moving blanks are found. Based on microscopic models in the context of the Kerner's three-phase traffic theory, physical reasons for moving blanks emergence within wide moving jams are disclosed. Microscopic nonlinear effects of moving jam emergence, propagation, and dissolution as well as a diverse variety of hysteresis effects in freeway traffic associated with phase transitions and congested traffic propagation are numerically investigated. Microscopic structure of moving jam fronts is numerically studied and compared with empirical results.

  13. Electron microscope studies

    Energy Technology Data Exchange (ETDEWEB)

    Crewe, A.V.; Kapp, O.H.

    1991-06-01

    This year our laboratory has continued to make progress in the design of electron-optical systems, in the study of structure-function relationships of large multi-subunit proteins, in the development of new image processing software and in achieving a workable sub-angstrom STEM. We present an algebraic approach to the symmetrical Einzel (unipotential) lens wherein we simplify the analysis by specifying a field shape that meets some preferred set of boundary or other conditions and then calculate the fields. In a second study we generalize this approach to study of three element electrostatic lenses of which the symmetrical Einzel lens is a particular form. The purpose is to develop a method for assisting in the design of a lens for a particular purpose. In our biological work we study a stable and functional dodecameric complex of globin chains from the hemoglobin of Lumbricus terrestris. This is a complex lacking the linker'' subunit first imaged in this lab and required for maintenance of the native structure. In addition, we do a complete work-up on the hemoglobin of the marine polychaete Eudistylia vancouverii demonstrating the presence of a hierarchy of globin complexes. We demonstrate stable field-emission in the sub-angstrom STEM and the preliminary alignment of the beam. We continue our exploration of a algorithms for alignment of sequences of protein and DNA. Our computer facilities now include four second generation RISC workstations and we continue to take increasing advantage of the floating-point and graphical performance of these devices.

  14. Sharp Tips on the Atomic Force Microscope

    Science.gov (United States)

    2008-01-01

    This image shows the eight sharp tips of the NASA's Phoenix Mars Lander's Atomic Force Microscope, or AFM. The AFM is part of Phoenix's Microscopy, Electrochemistry, and Conductivity Analyzer, or MECA. The microscope maps the shape of particles in three dimensions by scanning them with one of the tips at the end of a beam. For the AFM image taken, the tip at the end of the upper right beam was used. The tip pointing up in the enlarged image is the size of a smoke particle at its base, or 2 microns. This image was taken with a scanning electron microscope before Phoenix launched on August 4, 2007. The AFM was developed by a Swiss-led consortium in collaboration with Imperial College London. The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by NASA's Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin Space Systems, Denver.

  15. Modifizierte objective structured practical examination (OSPE als Leistungskontrolle im Kurs der Mikroskopischen Anatomie an der Universität Ulm [A modified objective structured practical examination (OSPE for medical student assessment in microscopic anatomy at Ulm University, Germany

    Directory of Open Access Journals (Sweden)

    Boeckers, Anja

    2006-11-01

    Full Text Available [english] In 2005 we introduced a modified objective structured examination (OSPE to assess practical capabilities in the course of microscopical anatomy for medical students at Ulm university. This test was intended to change and improve the working behaviour of students with respect to active participation during the course hours. During the OSPE examination the students had to examine 8 different tissue slides and pinpoint on substructures in a given time. The results were checked and documented by the supervisors in a standardized manner. The practical course and the novel examination procedure were subsequently evaluated by the students. The OSPE showed to be a practical, well accepted and personal ressources saving instrument for student assessment. The test showed a positive influence on student behaviour. [german] Im Sommersemster 2005 wurde an der Universität Ulm eine modifizierte objective practical examination als Erfolgskontrolle der mikroskopisch anatomischen Fähigkeiten von Medizinstundenten eingeführt. Dieser Test sollte als ein integrierendes Instrument, die vorhandenen Lehrangebote auf die Prüfung orientiert sinnvoll miteinander verknüpfen, und dadurch die Motivation zum eigenständigen Lern- und praktischen Arbeitsverhalten während der Kurszeiten erhöhen. In der Prüfung wurden den Studierenden 8 unterschiedliche histologische Schnittbild-präparate vorgelegt, in denen je eine Substruktur in einer vorgegeben Zeit bezeichnet werden sollte. Die Ergebnisse wurden vom Prüfer in standardisierter Weise kontrolliert und dokumentiert. Anschließend wurden der praktische Kurs der mikroskopischen Anatomie sowie die neue Prüfungsart von den Studierenden evaluiert. Zusammenfassend konnte gezeigt werden, dass ein OSPE in der mikroskopischen Anatomie einfach zu organisieren und praktikabel durchführbar ist. Es gelang durch die Einführung der OSPE-Prüfung in der mikroskopischen Anatomie unter Schonung der personellen Ressourcen

  16. Types of Sandstone Reservoir Diagenetic Facies and Microscopic Pore Structure Characteristics of Chang 8 1 Reservoir in Huaqing Oilfield%华庆油田长81储层成岩相类型及微观孔隙结构特征

    Institute of Scientific and Technical Information of China (English)

    任大忠; 孙卫; 魏虎; 周树勋; 张一果; 张茜

    2014-01-01

    In order to characterize the diagenetic facies and microscopic pore structure characteristics of low/ul-tra-low permeability sandstone reservoir in Chang 8 1 segments of Huaqing Oilfield,this paper discusses the dia-genetic process,cement type of each diagenetic facies,pore evolution,the effect of pore structure on the physi-cal property and fluid seepage characteristics.On the background of reservoir sedimentary characteristics,the test analysis methods are used and the testing oil exploration results for dynamic data validation is made,such as,physical property,casting lamella,scanning electron microscope (SEM),conventional pressure mercury, image pore,X-ray diffraction,oil-water relative permeability.Establishing the reservoir evolution frame in time and space:deposition (sedimentary facies)-diagenesis (diagenetic facies)-pore evolution are the controls of microscopic pore structure of reservoir physical property and seepage characteristics.Different diagenetic facies type have both constructive and destructive dual effects,specificing in the degrees of differences of compaction, cementation,function,dissolution.The qualitative analysis and quantitative description of indoor experiment of diagenetic facies microscopic pore structure have a consistency with testing for oil exploration results and experi-mental data.It is pointed out that the diagenetic facies and microscopic pore structure characteristics of this kind of reservoir can predict and evaluate favorable space.Chang 81 reservoir underwater distributary channel micro-facies with chlorite lining edge residual pore-dissolution phase combination of intergranular pore development is the most favorable reservoir belt.Pore of forced compaction-carbonate +illite cementation facies association is damaged too seriously to be an invalid reservoir zone.%为探讨华庆油田长81储层成岩相类型及相内微观孔隙结构特征,在储层沉积特征背景上,开展物性、铸体薄片、扫描电镜、

  17. Analysis on enhanced depth of field for integral imaging microscope.

    Science.gov (United States)

    Lim, Young-Tae; Park, Jae-Hyeung; Kwon, Ki-Chul; Kim, Nam

    2012-10-08

    Depth of field of the integral imaging microscope is studied. In the integral imaging microscope, 3-D information is encoded as a form of elemental images Distance between intermediate plane and object point decides the number of elemental image and depth of field of integral imaging microscope. From the analysis, it is found that depth of field of the reconstructed depth plane image by computational integral imaging reconstruction is longer than depth of field of optical microscope. From analyzed relationship, experiment using integral imaging microscopy and conventional microscopy is also performed to confirm enhanced depth of field of integral imaging microscopy.

  18. 红外显微镜-单点模式区分指甲油的研究%Studies on Determination of Nail Polish by FTIR Microscope-single Point Mode

    Institute of Scientific and Technical Information of China (English)

    张金庄; 吕丹

    2015-01-01

    该研究建立了一种利用显微红外技术检验指甲油成分的方法,对市面上常见的几种指甲油进行了分析检验。不同品牌同种颜色的指甲油或同种品牌相近颜色指甲油组成成分及配比不同,在红外谱图中其红外吸收峰的个数、位置、强度及形状存在差异,这为指甲油的显微红外技术检验提供了检验依据。研究结果表明,显微红外技术方法可以对不同品牌同种颜色的指甲油进行区分,也可以对同种品牌相近颜色的指甲油进行区分。该方法分析速度快,灵敏度高,所需样品量小,是一种较为理想的检验指甲油技术方法。%This paper introduces the method of using single point mode of FTIR microscopy to analyze several common different brand nail polishes on the market. Different composition and ratio shown in the same color nail polish of different brand of or the similar color the same brand lead to the difference in number, location and intensity and shape on FTIR absorption peaks. So, it provides the basis for distinguishing the nail polish by using FTIR microscopy technology. The results show that the same color nail polish of different brand or the similar color of the same brand can be distinguished by using FTIR microscopy technology, which is an ideal method to distinguish nail polish for its features of rapidity, sensitivity and small dosage.

  19. Standardization of phaseolus vulgaris valves by macro- and microscopic characteristics

    Directory of Open Access Journals (Sweden)

    Анна Ігорівна Крюкова

    2016-03-01

    Full Text Available During the last years on the Ukrainian pharmaceutical market a tendency to increase the range of the national herbal remedies is observed. Native flora herbs, having a sufficient resource base, deserve special attention and are characterized by a number of economic benefits for manufacturers. The implementation of herbal remedies in medical practice is accompanied by the necessity to improve the quality control of herbal material and to develop normative documents. Macro- and microscopy analysis becomes important at standardization of herbal material especially cut and powdered.Aim. The aim of our work was to carry out macro- and microscopy research of Phaseolus vulgaris and to determine its diagnostic morphologic and anatomic features.Methods. The conventional research methods in pharmacognosy have been used; photomicrography has been taken by using microscope MC-10 and Samsung PL 50 camera.Results. As a result of research, the microscopic diagnostic characteristics for Phaseolus vulgaris valves have been proposed, e.g.: the valves are elongated, straight, navicular or grooved, twisted to some extent; the external surface is smooth or slightly undulating, mat, pale yellow or yellow; the internal surface is shiny, white or yellowish-white. Sometimes carpophore (stalk may occur. The microscopic diagnostic features have been determined and offered, e.g.: cells of outer epidermis are pentagonal and hexagonal, with plicated cuticle; stomata are surrounded by 3–4 subsidiary narrow cells, additionally surrounded by 5–6 narrow cells; cover trichomes and glandular trichomes are elongated, pointed and unbranched; xylem vessels and tracheids; non-bundled structure stalk fragments with pericyclic sclerenchyma and secretory cells in the phloem.Conclusion. Research on determination of the macro- and microscopic characteristics of Phaseolus vulgaris valves has been carried out. The diagnostic morphological and anatomic elements in herbal material have

  20. The optics of microscope image formation.

    Science.gov (United States)

    Wolf, David E

    2013-01-01

    Although geometric optics gives a good understanding of how the microscope works, it fails in one critical area, which is explaining the origin of microscope resolution. To accomplish this, one must consider the microscope from the viewpoint of physical optics. This chapter describes the theory of the microscope-relating resolution to the highest spatial frequency that a microscope can collect. The chapter illustrates how Huygens' principle or construction can be used to explain the propagation of a plane wave. It is shown that this limit increases with increasing numerical aperture (NA). As a corollary to this, resolution increases with decreasing wavelength because of how NA depends on wavelength. The resolution is higher for blue light than red light. Resolution is dependent on contrast, and the higher the contrast, the higher the resolution. This last point relates to issues of signal-to-noise and dynamic range. The use of video and new digital cameras has necessitated redefining classical limits such as those of Rayleigh's criterion. Copyright © 2007 Elsevier Inc. All rights reserved.

  1. Control of optical and electrical properties of nanosheets by the chemical structure of the turning point in a foldable polymer

    Science.gov (United States)

    Ikeda, Taichi; Tamura, Hiroyuki; Sakurai, Tsuneaki; Seki, Shu

    2016-07-01

    Oligomers of tetra(ethylene glycol)-disubstituted phenyl-capped bithiophene (Ph2TPh) linked by catechol and resorcinol were prepared. Catechol and resorcinol link the monomers via the ortho- and meta-positions of the benzene ring, respectively, and function as turning points in the folding process of the polymer. It was confirmed that the ortho-linked 8mer (o-8mer) and meta-linked 8mer (m-8mer) could form nanosheets through the self-assembly of folded polymers in o-dichlorobenzene. We confirmed that the arrangement of thiophene units inside the nanosheets was controllable by changing the chemical structure of the turning point. The different arrangements of the Ph2TPh units led to changes in other physical properties such as UV-Vis absorption, nanosheet thickness and charge carrier transport. The absorption spectrum of the o-8mer nanosheets suggested that the Ph2TPh units are arranged vertical to the lateral direction of the nanosheets. On the other hand, the Ph2TPh units in the m-8mer nanosheets were considered to have a tilted orientation. The change in the Ph2TPh tilt angle inside the nanosheets was supported by the different thicknesses of the o-8mer and m-8mer nanosheets. The relationship between the absorption spectrum and Ph2TPh unit arrangement was discussed based on the DFT calculation. Intrinsic charge carrier transport properties were evaluated by a noncontact microwave-based method. The o-8mer nanosheets showed higher conductivity than the m-8mer and triazole-linked-8mer nanosheets. The lifetime of charge carriers in the nanosheet was longer than that in the lamellar structure of the drop-cast film.Oligomers of tetra(ethylene glycol)-disubstituted phenyl-capped bithiophene (Ph2TPh) linked by catechol and resorcinol were prepared. Catechol and resorcinol link the monomers via the ortho- and meta-positions of the benzene ring, respectively, and function as turning points in the folding process of the polymer. It was confirmed that the ortho-linked 8mer (o

  2. (5,5 BN nanotubes -- Dioxin interactions: Influence of Point Defect on the Structural and the Electronic Properties

    Directory of Open Access Journals (Sweden)

    A. Rodríguez Juárez

    2014-04-01

    Full Text Available The influence of dioxin on the structural and the electronic properties of (5,5 boron nitride nanotubes are reported in this work. Both, the ends and the surface at different sites and orientations are considered in the study. The density functional theory within the Perdew-Wang approximation together the doubly polarized base is employed. The dioxin is mainly adsorbed on the nanotube surface increasing its solubility and dispersion. A reduction on the reactivity and on the work function is also observed, important properties in the devices design. No changes are observed when the compose system is immerse in water. At the same time, point defects and carbon atom impurities improve the field emission.

  3. Fixed-point structure and effective fractional dimensionality for O(N ) models with long-range interactions

    Science.gov (United States)

    Defenu, Nicoló; Trombettoni, Andrea; Codello, Alessandro

    2015-11-01

    We study, by renormalization group methods, O (N ) models with interactions decaying as power law with exponent d +σ . When only the long-range momentum term pσ is considered in the propagator, the critical exponents can be computed from those of the corresponding short-range O (N ) models at an effective fractional dimension Deff. Neglecting wave function renormalization effects the result for the effective dimension is Deff=2/d σ , which turns to be exact in the spherical model limit (N →∞ ) . Introducing a running wave function renormalization term the effective dimension becomes instead Deff=(2/-ηSR)d σ . The latter result coincides with the one found using standard scaling arguments. Explicit results in two and three dimensions are given for the exponent ν . We propose an improved method to describe the full theory space of the models where both short- and long-range propagator terms are present and no a priori choice among the two in the renormalization group flow is done. The eigenvalue spectrum of the full theory for all possible fixed points is drawn and a full description of the fixed-point structure is given, including multicritical long-range universality classes. The effective dimension is shown to be only approximate, and the resulting error is estimated.

  4. Calculation and structural analysis for the rigidity of air spindle in the single point diamond turning lathe

    Science.gov (United States)

    An, Chenhui; Xu, Qiao; Zhang, Feihu; Zhang, Jianfeng

    2007-12-01

    Ultra-precision machining for optical lens is a key subject in the field of modern optics machining, the focus of which is the higher demands for profile precision and surface roughness. As a kind of deterministic machining, the single point diamond turning lathe is widely used in the optical field, thus higher stabilization for the turning lathe is required with small amplitude of vibrations in a broad frequency-domain. The single point diamond turning lathe now boast its various forms both at home and abroad, and the vertical flying cutting milling style is an important branch. This kind of lathe is characterized with low guide rail velocity and main errors of this part are the alignment error of guide rail, the disturbance evolved by driving components, and the low velocity crawl. Such errors are presented as low-frequency profile error on the workpiece surface, and often relate to the guide rail velocity. The rotate speed of the spindle is higher comparatively, and the system is composed as a vibration element with mass, air-rigidity, air-damping and the periodicity impact vibration. As a result, this vibration can copy to the work piece by the tool nose in machining process, so we must manage to reduce the vibration for high machining precision. This paper is to deduce the proper dynamic parameter for reducing the spindle vibration and optimize the spindle structure via dynamic calculation for the diamond turning lathes used and bring forward the reformative idea for the lathes.

  5. Optimal Constraints on Local Primordial Non-Gaussianity from the Two-Point Statistics of Large-Scale Structure

    CERN Document Server

    Hamaus, Nico; Desjacques, Vincent

    2011-01-01

    One of the main signatures of primordial non-Gaussianity of the local type is a scale-dependent correction to the bias of large-scale structure tracers such as galaxies or clusters, whose amplitude depends on the bias of the tracers itself. The dominant source of noise in the power spectrum of the tracers is caused by sampling variance on large scales (where the non-Gaussian signal is strongest) and shot noise arising from their discrete nature. Recent work has argued that one can avoid sampling variance by comparing multiple tracers of different bias, and suppress shot noise by optimally weighting halos of different mass. Here we combine these ideas and investigate how well the signatures of non-Gaussian fluctuations in the primordial potential can be extracted from the two-point correlations of halos and dark matter. On the basis of large $N$-body simulations with local non-Gaussian initial conditions and their halo catalogs we perform a Fisher matrix analysis of the two-point statistics. Compared to the st...

  6. Assessment of Forest Structure Using Two UAV Techniques: A Comparison of Airborne Laser Scanning and Structure from Motion (SfM Point Clouds

    Directory of Open Access Journals (Sweden)

    Luke Wallace

    2016-03-01

    Full Text Available This study investigates the potential of unmanned aerial vehicles (UAVs to measure and monitor structural properties of forests. Two remote sensing techniques, airborne laser scanning (ALS and structure from motion (SfM were tested to capture three-dimensional structural information from a small multi-rotor UAV platform. A case study is presented through the analysis of data collected from a 30 × 50 m plot in a dry sclerophyll eucalypt forest with a spatially varying canopy cover. The study provides an insight into the capabilities of both technologies for assessing absolute terrain height, the horizontal and vertical distribution of forest canopy elements, and information related to individual trees. Results indicate that both techniques are capable of providing information that can be used to describe the terrain surface and canopy properties in areas of relatively low canopy closure. However, the SfM photogrammetric technique underperformed ALS in capturing the terrain surface under increasingly denser canopy cover, resulting in point density of less than 1 ground point per m2 and mean difference from ALS terrain surface of 0.12 m. This shortcoming caused errors that were propagated into the estimation of canopy properties, including the individual tree height (root mean square error of 0.92 m for ALS and 1.30 m for SfM. Differences were also seen in the estimates of canopy cover derived from the SfM (50% and ALS (63% pointclouds. Although ALS is capable of providing more accurate estimates of the vertical structure of forests across the larger range of canopy densities found in this study, SfM was still found to be an adequate low-cost alternative for surveying of forest stands.

  7. Estimation of Minimal Breakdown Point in a GaP Plasma Structure and Discharge Features in Air and Argon Media

    Science.gov (United States)

    Kurt, H. Hilal; Tanrıverdi, Evrim

    2016-08-01

    We present gas discharge phenomena in argon and air media using a gallium phosphide (GaP) semiconductor and metal electrodes. The system has a large-diameter ( D) semiconductor and a microscaled adjustable interelectrode gap ( d). Both theoretical and experimental findings are discussed for a direct-current (dc) electric field ( E) applied to this structure with parallel-plate geometry. As one of the main parameters, the pressure p takes an adjustable value from 0.26 kPa to 101 kPa. After collection of experimental data, a new theoretical formula is developed to estimate the minimal breakdown point of the system as a function of p and d. It is proven that the minimal breakdown point in the semiconductor and metal electrode system differs dramatically from that in metal and metal electrode systems. In addition, the surface charge density σ and spatial electron distribution n e are calculated theoretically. Current-voltage characteristics (CVCs) demonstrate that there exist certain negative differential resistance (NDR) regions for small interelectrode separations (i.e., d = 50 μm) and low and moderate pressures between 3.7 kPa and 13 kPa in Ar medium. From the difference of currents in CVCs, the bifurcation of the discharge current is clarified for an applied voltage U. Since the current differences in NDRs have various values from 1 μA to 7.24 μA for different pressures, the GaP semiconductor plasma structure can be used in microwave diode systems due to its clear NDR region.

  8. Pre-lithification structures, deformation mechanisms, and fabric ellipsoids in slumped turbidites from the Pigeon Point Formation, California

    Science.gov (United States)

    Paterson, Scott R.; Tobisch, Othmar T.

    1993-06-01

    Paterson, S.R. and Tobisch, O.T. 1993. Pre-lithification structures, deformation mechanisms, and fabric ellipsoids in slumped turbidites from the Pigeon Point Formation, California. Tectonophysics, 222: 135-149. Quantitative fabric, structural, and microstructural analyses of pre-lithification folds, foliations, and lineations formed by slumping of turbidite sequences in the Cretaceous Pigeon Point Formation, California, provide a useful comparison with strain and microstructures developed in lithified and tectonically deformed turbidites. Our results indicate the following: (1) multiple generations of folds, cleavages, and lineations can develop prior to any post-lithification tectonic deformation (2) individual grains in sandstones have variable axial ratios, but the ratios and orientations of large populations of grains define fabric ellipsoids with small axial ratios ( ave. = 1.25:1.13:1) (3) phyllosilicate grains define moderate flattening fabrics (reflecting 20-40% shortening or volume loss), with the intensity of alignment partly controlled by the percent of quartz and feldspar grains (4) the fabric ellipsoids in sand-rich layers largely reflect deposition and slumping: pre- and post-slump compactions did not occur, in sand-rich units but did align clay particles in mud-siltstone units, and (5) intra-grain microstructures in quartz and feldspar (e.g., undulose extinction, subgrains) are inherited or recycled features rather than representing effects of post-lithification strains. Our data also suggest that prelithification slumping occurred by pervasive grain rotation and grain boundary sliding in saturated sands with some local movement of material along bedding horizons. A likely model for the folding and associated fabrics is that buckling and fold-hinge flattening drove fluid expulsion, which in turn caused local grain-scale realignment, transposition of bedding, and the development of an axial planar cleavage in the hinge zones. Continued fluid flow was

  9. Nanosecond electron microscopes

    Science.gov (United States)

    Bostanjoglo; Elschner; Mao; Nink; Weingartner

    2000-04-01

    Combining electron optics, fast electronics and pulsed lasers, a transmission and a photoelectron emission microscope were built, which visualize events in thin films and on surfaces with a time resolution of several nanoseconds. The high-speed electron microscopy is capable to track fast laser-induced processes in metals below the ablation threshold, which are difficult to detect by other imaging techniques. The material response to nano- and femtosecond laser pulses was found to be very different. It was dominated by thermo/chemocapillary flow and chemical reactions in the case of nanosecond pulses, and by mechanical deformations and non-thermal electron emission after a femtosecond pulse.

  10. Atomic Force Microscope

    Energy Technology Data Exchange (ETDEWEB)

    Day, R.D.; Russell, P.E.

    1988-12-01

    The Atomic Force Microscope (AFM) is a recently developed instrument that has achieved atomic resolution imaging of both conducting and non- conducting surfaces. Because the AFM is in the early stages of development, and because of the difficulty of building the instrument, it is currently in use in fewer than ten laboratories worldwide. It promises to be a valuable tool for obtaining information about engineering surfaces and aiding the .study of precision fabrication processes. This paper gives an overview of AFM technology and presents plans to build an instrument designed to look at engineering surfaces.

  11. Recent Opportunity Microscopic Imager Results

    Science.gov (United States)

    Herkenhoff, K. E.; Arvidson, R. E.; Jolliff, B. L.; Yingst, R.; Team, A.

    2013-12-01

    Opportunity arrived at exposures of Endeavour crater rim rocks in August 2011, on a hill dubbed 'Cape York.' These rocks have been the goal of exploration by Opportunity for the past few years because spectral evidence for phyllosilicates was observed at this location in orbital remote sensing data. As Opportunity circum¬navigated Cape York, the Microscopic Imager (MI) was used to examine the fine-scale textures of various soils and rocky outcrops. As reported previously, Opportunity discovered multiple bright linear features along the western periphery of Cape York that have been interpreted as veins of Ca sulfate deposited in fractures within the bedrock of Cape York. Opportunity then explored the northern and eastern sides of Cape York, including the area around 'Matijevic Hill' that shows evidence for phyllosilicates in CRISM data acquired from the Mars Reconnaissance Orbiter. One of the first outcrops examined near Matijevic Hill, dubbed 'Kirkwood,' is dominated by millimeter-size spherules. Unlike the hematite-rich concretions observed by Opportunity on Meridiani Planum, the aggregated 'newberries' in the Kirkwood exposure display internal structure and resistant rims. Compositionally, the spherule-rich rock is very similar to a nearby spherule-poor outcrop dubbed 'Whitewater Lake.' Thus these spherules have a more basalt-like composition compared to the hematite-rich concretions of the Burns Formation. The origin of the Kirkwood outcrop is uncertain, but the setting on the rim of the 22-km diameter Endeavour crater suggests that perhaps impact melting was involved in lapilli formation, possibly followed by mobilization and sorting in the ejecta blanket. Alternatively, the newberries may be diagenetic iron oxide concretions that are less well cemented than the 'blueberries' of the younger sulfate-rich Burns Formation. The Whitewater Lake outcrops contain the phyllosilicate phases observed from orbit, and are the oldest materials yet investigated by

  12. Hydrogeology of the Point Lookout Sandstone in the San Juan structural basin, New Mexico, Colorado, Arizona and Utah

    Science.gov (United States)

    Craigg, Steven D.; Dam, W.L.; Kernodle, J.M.; Thorn, C.R.; Levings, G.W.

    1990-01-01

    This report is one in a series resulting from the U.S. Geological Survey's Regional Aquifer-System Analysis (RASA) study of the San Juan structural basin that began in October 1984. Previous reports in the series describe the hydrogeology of the Dakota Sandstone (Craigg and others, 1989), Morrison Formation (Dam and others, 1990), Gallup Sandstone (Kernodle and others, 1989), Menefee Formation (Levings and others, 1990), and Cliff House Sandstone (Thorn and others, 1990), in the San Juan structural basin. The purposes of the RASA (Welder, 1986) are to: (1) Define and evaluate the aquifer system; (2) assess the effects of past, present, and potential ground-water use on aquifers and streams; and (3) determine the availability and quality of ground water. This report summarizes information on the geology and the occurrence and quality of water in the Point Lookout Sandstone, one of the primary water-bearing units in the regional aquifer system. Data used in this report were collected during the study or were derived from existing records in the U.S. Geological Survey's computerized National Water Information System (NWIS) data base, the Petroleum Information Corporation's database, and the Dwight's ENERGYDATA Inc. BRIN data base. Although all data available for the Point Lookout Sandstone were considered in formulating the discussions in the text, not all those data could be plotted on the illustrations. The San Juan structural basin is in New Mexico, Colorado, Arizona, and Utah and has an area of about 21,600 square miles (fig. 1). The structural basin is about 140 miles wide and about 200 miles long. The study area is that part of the structural basin that contains rocks of Triassic or younger age and, therefore, is less areally extensive than the structural basin. Triassic through Tertiary sedimentary rocks are emphasized in this study because the major aquifers in the basin are present in these rocks. The study area is about 140 miles wide (about the same as the

  13. Formative Assessment Probes: Representing Microscopic Life

    Science.gov (United States)

    Keeley, Page

    2011-01-01

    This column focuses on promoting learning through assessment. The author discusses the formative assessment probe "Pond Water," which reveals how elementary children will often apply what they know about animal structures to newly discovered microscopic organisms, connecting their knowledge of the familiar to the unfamiliar through…

  14. Electron microscope phase enhancement

    Science.gov (United States)

    Jin, Jian; Glaeser, Robert M.

    2010-06-15

    A microfabricated electron phase shift element is used for modifying the phase characteristics of an electron beam passing though its center aperture, while not affecting the more divergent portion of an incident beam to selectively provide a ninety-degree phase shift to the unscattered beam in the back focal plan of the objective lens, in order to realize Zernike-type, in-focus phase contrast in an electron microscope. One application of the element is to increase the contrast of an electron microscope for viewing weakly scattering samples while in focus. Typical weakly scattering samples include biological samples such as macromolecules, or perhaps cells. Preliminary experimental images demonstrate that these devices do apply a ninety degree phase shift as expected. Electrostatic calculations have been used to determine that fringing fields in the region of the scattered electron beams will cause a negligible phase shift as long as the ratio of electrode length to the transverse feature-size aperture is about 5:1. Calculations are underway to determine the feasibility of aspect smaller aspect ratios of about 3:1 and about 2:1.

  15. Forensic Scanning Electron Microscope

    Science.gov (United States)

    Keeley, R. H.

    1983-03-01

    The scanning electron microscope equipped with an x-ray spectrometer is a versatile instrument which has many uses in the investigation of crime and preparation of scientific evidence for the courts. Major applications include microscopy and analysis of very small fragments of paint, glass and other materials which may link an individual with a scene of crime, identification of firearms residues and examination of questioned documents. Although simultaneous observation and chemical analysis of the sample is the most important feature of the instrument, other modes of operation such as cathodoluminescence spectrometry, backscattered electron imaging and direct x-ray excitation are also exploited. Marks on two bullets or cartridge cases can be compared directly by sequential scanning with a single beam or electronic linkage of two instruments. Particles of primer residue deposited on the skin and clothing when a gun is fired can be collected on adhesive tape and identified by their morphology and elemental composition. It is also possible to differentiate between the primer residues of different types of ammunition. Bullets may be identified from the small fragments left behind as they pass through the body tissues. In the examination of questioned documents the scanning electron microscope is used to establish the order in which two intersecting ink lines were written and to detect traces of chemical markers added to the security inks on official documents.

  16. Spill-point analysis and structural trapping capacity in saline aquifers using MRST-co2lab

    Science.gov (United States)

    Møll Nilsen, Halvor; Lie, Knut-Andreas; Møyner, Olav; Andersen, Odd

    2015-02-01

    Geological carbon storage represents a substantial challenge for the subsurface geosciences. Knowledge of the subsurface can be captured in a quantitative form using computational methods developed within petroleum production. However, to provide good estimates of the likely outcomes over thousands of years, traditional 3D simulation methods should be combined with other techniques developed specifically to study large-scale, long-term migration problems, e.g., in basin modeling. A number of such methods have been developed as a separate module in the open-source Matlab Reservoir Simulation Toolbox (MRST). In this paper, we present a set of tools provided by this module, consisting of geometrical and percolation type methods for computing structural traps and spill paths below a sealing caprock. Using concepts from water management, these tools can be applied on large-scale aquifer models to quickly estimate potential for structural trapping, determine spill paths from potential injection points, suggest optimal injection locations, etc. We demonstrate this by a series of examples applied on publicly available datasets. The corresponding source code is provided along with the examples.

  17. Dynamical and anharmonic effects on the electron-phonon coupling and the zero-point renormalization of the band structure

    Science.gov (United States)

    Antonius, Gabriel; Poncé, Samuel; Lantagne-Hurtubise, Étienne; Auclair, Gabriel; Côté, Michel; Gonze, Xavier

    2015-03-01

    The electron-phonon coupling in solids renormalizes the band structure, reducing the band gap by several tenths of an eV in light-atoms semiconductors. Using the Allen-Heine-Cardona theory (AHC), we compute the zero-point renormalization (ZPR) as well as the quasiparticle lifetimes of the full band structure in diamond, BN, LiF and MgO. We show how dynamical effects can be included in the AHC theory, and still allow for the use of a Sternheimer equation to avoid the summation over unoccupied bands. The convergence properties of the electron-phonon coupling self-energy with respect to the Brillouin zone sampling prove to be strongly affected by dynamical effects. We complement our study with a frozen-phonon approach, which reproduces the static AHC theory, but also allows to probe the phonon wavefunctions at finite displacements and include anharmonic effects in the self-energy. We show that these high-order components tend to reduce the strongest electron-phonon coupling elements, which affects significantly the band gap ZPR.

  18. Fluorescence, pigment and microscopic characterization of Bering Sea phytoplankton community structure and photosynthetic competency in the presence of a Cold Pool during summer

    Science.gov (United States)

    Goes, Joaquim I.; Gomes, Helga do Rosario; Haugen, Elin M.; McKee, Kali T.; D'Sa, Eurico J.; Chekalyuk, Alexander M.; Stoecker, Diane K.; Stabeno, Phyllis J.; Saitoh, Sei-Ichi; Sambrotto, Raymond N.

    2014-11-01

    Spectral fluorescence measurements of phytoplankton chlorophyll a (Chl a), phytoplankton phycobilipigments and variable fluorescence (Fv/Fm), are utilized with High Performance Liquid Chromatography (HPLC) estimates of phytoplankton pigments and microscopic cells counts to construct a comprehensive picture of summer-time phytoplankton communities and their photosynthetic competency in the eastern Bering Sea shelf. Although the Bering Sea was ice-free during our study, the exceptionally cold winter that preceded the summer of 2008 when our cruise took place, facilitated the formation of a "Cold Pool" (<2 °C) and its entrapment at depth in the northern middle shelf. The presence of a strong pycnocline over the entire middle and outer shelves restricted inorganic nutrient fluxes into the surface waters resulting in phytoplankton populations that were photo-physiologically stressed due to nutrient limitation. Elevated Chl a concentrations recorded in the Green Belt along the shelf edge of the Bering Sea, were due to Phaeocystis pouchetii and nano-sized cryptophytes. Although inorganic nutrients were not limiting in the Green Belt, Fv/Fm values were low in all probability due to iron limitation. Phytoplankton communities in the low biomass surface waters of the middle shelf were comprised of prasinophytes, haptophytes, cryptophytes and diatoms. In the northern part of the middle shelf, a sinking bloom made up of the centric diatoms Chaeotoceros socialis, Thalassiosira nordenskioeldii and Porosira glacialis was located above the Cold Pool. The high biomass associated with this senescent bloom and its accretion above the pycnocline, suggests that the Cold Pool acts as a barrier, preventing sinking phytoplankton from reaching the bottom where they can become available to benthic organisms. We further posit that if summer-time storms are not energetic enough and the Cold Pool is not eroded, its presence facilitates the transfer of the large spring phytoplankton bloom to

  19. The effect of Er:YAG laser irradiation on the scanning electron microscopic structure and surface roughness of various implant surfaces: an in vitro study.

    Science.gov (United States)

    Shin, Seung-Il; Min, Hyung-Ki; Park, Bo-Hyun; Kwon, Young-Hyuk; Park, Joon-Bong; Herr, Yeek; Heo, Seong-Joo; Chung, Jong-Hyuk

    2011-11-01

    The purpose of this study was to evaluate the surface roughness (R(a)) and microscopic change to irradiated dental implant surfaces in vitro and ultimately to determine the proper pulse energy power and application time for the clinical use of Er:YAG lasers. Anodic oxidized surface implants and sand-blasted, large-grit, and acid-etched (SLA) surface implants were used. Each experimental group of implant surfaces included ten implants. Nine implants were used for the laser irradiation test groups and one for the control group. Each test group was equally divided into three subgroups by irradiated pulse energy power. Using an Er:YAG laser, each subgroup of anodic oxidized surface implants was split into 60-, 100-, and 140-mJ/pulse groups, with each subgroup of SLA surface implants irradiated with a 100-, 140-, or 180-mJ/pulse. Three implants in every test subgroup were respectively irradiated for 1, 1.5, and 2 min. The R(a) values for each specimen were recorded and every specimen was observed by SEM. Irradiation by Er:YAG laser led to a decrease in implant surface roughness that was not statistically significant. In anodic oxidized surfaces, the oxidized layer peeled off of the surface, and cracks appeared on implant surfaces in the 100- and 140-mJ/pulse subgroups. However, with SLA surfaces, no significant change in surface texture could be found on any implant surface in the 100- and 140-mJ/pulse subgroups. The melting and fusion phenomena of implant surfaces were observed with all application times with 180 mJ/pulse irradiation. The SLA implant surfaces are stable with laser intensities of less than 140 mJ/pulse and an irradiation time of less than 2 min. The anodic oxidized surfaces were not stable with laser intensities of 100 mJ/pulse when an Er:YAG laser was used to detoxify implant surfaces.

  20. Control over structure-specific flexibility improves anatomical accuracy for point-based deformable registration in bladder cancer radiotherapy

    Energy Technology Data Exchange (ETDEWEB)

    Wognum, S.; Chai, X.; Hulshof, M. C. C. M.; Bel, A. [Department of Radiotherapy, Academic Medical Center, Meiberdreef 9, 1105 AZ Amsterdam (Netherlands); Bondar, L.; Zolnay, A. G.; Hoogeman, M. S. [Department of Radiation Oncology, Daniel den Hoed Cancer Center, Erasmus Medical Center, Groene Hilledijk 301, 3075 EA Rotterdam (Netherlands)

    2013-02-15

    Purpose: Future developments in image guided adaptive radiotherapy (IGART) for bladder cancer require accurate deformable image registration techniques for the precise assessment of tumor and bladder motion and deformation that occur as a result of large bladder volume changes during the course of radiotherapy treatment. The aim was to employ an extended version of a point-based deformable registration algorithm that allows control over tissue-specific flexibility in combination with the authors' unique patient dataset, in order to overcome two major challenges of bladder cancer registration, i.e., the difficulty in accounting for the difference in flexibility between the bladder wall and tumor and the lack of visible anatomical landmarks for validation. Methods: The registration algorithm used in the current study is an extension of the symmetric-thin plate splines-robust point matching (S-TPS-RPM) algorithm, a symmetric feature-based registration method. The S-TPS-RPM algorithm has been previously extended to allow control over the degree of flexibility of different structures via a weight parameter. The extended weighted S-TPS-RPM algorithm was tested and validated on CT data (planning- and four to five repeat-CTs) of five urinary bladder cancer patients who received lipiodol injections before radiotherapy. The performance of the weighted S-TPS-RPM method, applied to bladder and tumor structures simultaneously, was compared with a previous version of the S-TPS-RPM algorithm applied to bladder wall structure alone and with a simultaneous nonweighted S-TPS-RPM registration of the bladder and tumor structures. Performance was assessed in terms of anatomical and geometric accuracy. The anatomical accuracy was calculated as the residual distance error (RDE) of the lipiodol markers and the geometric accuracy was determined by the surface distance, surface coverage, and inverse consistency errors. Optimal parameter values for the flexibility and bladder weight