Global and Kinetic MHD Simulation by the Gpic-MHD Code
Hiroshi NAITOU; Yusuke YAMADA; Kenji KAJIWARA; Wei-li LEE; Shinji TOKUDA; Masatoshi YAGI
2011-01-01
In order to implement large-scale and high-beta tokamak simulation, a new algorithm of the electromagnetic gyrokinetic PIC （particle-in-cell） code was proposed and installed on the Gpic-MHD code [Gyrokinetic PIC code for magnetohydrodynamic （MHD） simulation]. In the new algorithm, the vorticity equation and the generalized Ohm＇s law along the magnetic field are derived from the basic equations of the gyrokinetic Vlasov, Poisson, and Ampere system and are used to describe the spatio-temporal evolution of the field quantities of the electrostatic potential φ and the longitudinal component of the vector potential Az. The basic algorithm is equivalent to solving the reduced-MHD-type equations with kinetic corrections, in which MHD physics related to Alfven modes are well described. The estimation of perturbed electron pressure from particle dynamics is dominant, while the effects of other moments are negligible. Another advantage of the algorithm is that the longitudinal induced electric field, ETz = -δAz/δt, is explicitly estimated by the generalized Ohm＇s law and used in the equations of motion. Furthermore, the particle velocities along the magnetic field are used （vz-formulation） instead of generalized momentums （pz-formulation）, hence there is no problem of ＇cancellation＇, which would otherwise appear when Az is estimated from the Ampere＇s law in the pz-formulation. The successful simulation of the collisionless internal kink mode by the new Gpic-MHD with realistic values of the large-scale and high-beta tokamaks revealed the usefulness of the new algorithm.
Divergence-free MHD Simulations with the HERACLES Code
Vides J.
2013-12-01
Full Text Available Numerical simulations of the magnetohydrodynamics (MHD equations have played a significant role in plasma research over the years. The need of obtaining physical and stable solutions to these equations has led to the development of several schemes, all requiring to satisfy and preserve the divergence constraint of the magnetic field numerically. In this paper, we aim to show the importance of maintaining this constraint numerically. We investigate in particular the hyperbolic divergence cleaning technique applied to the ideal MHD equations on a collocated grid and compare it to the constrained transport technique that uses a staggered grid to maintain the property. The methods are implemented in the software HERACLES and several numerical tests are presented, where the robustness and accuracy of the different schemes can be directly compared.
Relativistic modeling capabilities in PERSEUS extended MHD simulation code for HED plasmas
Hamlin, Nathaniel D., E-mail: nh322@cornell.edu [438 Rhodes Hall, Cornell University, Ithaca, NY, 14853 (United States); Seyler, Charles E., E-mail: ces7@cornell.edu [Cornell University, Ithaca, NY, 14853 (United States)
2014-12-15
We discuss the incorporation of relativistic modeling capabilities into the PERSEUS extended MHD simulation code for high-energy-density (HED) plasmas, and present the latest hybrid X-pinch simulation results. The use of fully relativistic equations enables the model to remain self-consistent in simulations of such relativistic phenomena as X-pinches and laser-plasma interactions. By suitable formulation of the relativistic generalized Ohm’s law as an evolution equation, we have reduced the recovery of primitive variables, a major technical challenge in relativistic codes, to a straightforward algebraic computation. Our code recovers expected results in the non-relativistic limit, and reveals new physics in the modeling of electron beam acceleration following an X-pinch. Through the use of a relaxation scheme, relativistic PERSEUS is able to handle nine orders of magnitude in density variation, making it the first fluid code, to our knowledge, that can simulate relativistic HED plasmas.
Frutos-Alfaro, Francisco
2015-01-01
A program to generate codes in Fortran and C of the full Magnetohydrodynamic equations is shown. The program used the free computer algebra system software REDUCE. This software has a package called EXCALC, which is an exterior calculus program. The advantage of this program is that it can be modified to include another complex metric or spacetime. The output of this program is modified by means of a LINUX script which creates a new REDUCE program to manipulate the MHD equations to obtain a code that can be used as a seed for a MHD code for numerical applications. As an example, we present part of output of our programs for Cartesian coordinates and how to do the discretization.
Extension of the MURaM radiative MHD code for coronal simulations
Rempel, Matthias
2016-01-01
We present a new version of the MURaM radiative MHD code that allows for simulations spanning from the upper convection zone into the solar corona. We implemented the relevant coronal physics in terms of optically thin radiative loss, field aligned heat conduction and an equilibrium ionization equation of state. We artificially limit the coronal Alfv{\\'e}n and heat conduction speeds to computationally manageable values using an approximation to semi-relativistic MHD with an artificially reduced speed of light (Boris correction). We present example solutions ranging from quiet to active Sun in order to verify the validity of our approach. We quantify the role of numerical diffusivity for the effective coronal heating. We find that the (numerical) magnetic Prandtl number determines the ratio of resistive to viscous heating and that owing to the very large magnetic Prandtl number of the solar corona, heating is expected to happen predominantly through viscous dissipation. We find that reasonable solutions can be...
Laser-Plasma Modeling Using PERSEUS Extended-MHD Simulation Code for HED Plasmas
Hamlin, Nathaniel; Seyler, Charles
2016-10-01
We discuss the use of the PERSEUS extended-MHD simulation code for high-energy-density (HED) plasmas in modeling laser-plasma interactions in relativistic and nonrelativistic regimes. By formulating the fluid equations as a relaxation system in which the current is semi-implicitly time-advanced using the Generalized Ohm's Law, PERSEUS enables modeling of two-fluid phenomena in dense plasmas without the need to resolve the smallest electron length and time scales. For relativistic and nonrelativistic laser-target interactions, we have validated a cycle-averaged absorption (CAA) laser driver model against the direct approach of driving the electromagnetic fields. The CAA model refers to driving the radiation energy and flux rather than the fields, and using hyperbolic radiative transport, coupled to the plasma equations via energy source terms, to model absorption and propagation of the radiation. CAA has the advantage of not requiring adequate grid resolution of each laser wavelength, so that the system can span many wavelengths without requiring prohibitive CPU time. For several laser-target problems, we compare existing MHD results to extended-MHD results generated using PERSEUS with the CAA model, and examine effects arising from Hall physics. This work is supported by the National Nuclear Security Administration stewardship sciences academic program under Department of Energy cooperative agreements DE-FOA-0001153 and DE-NA0001836.
Extension of the MURaM Radiative MHD Code for Coronal Simulations
Rempel, M.
2017-01-01
We present a new version of the MURaM radiative magnetohydrodynamics (MHD) code that allows for simulations spanning from the upper convection zone into the solar corona. We implement the relevant coronal physics in terms of optically thin radiative loss, field aligned heat conduction, and an equilibrium ionization equation of state. We artificially limit the coronal Alfvén and heat conduction speeds to computationally manageable values using an approximation to semi-relativistic MHD with an artificially reduced speed of light (Boris correction). We present example solutions ranging from quiet to active Sun in order to verify the validity of our approach. We quantify the role of numerical diffusivity for the effective coronal heating. We find that the (numerical) magnetic Prandtl number determines the ratio of resistive to viscous heating and that owing to the very large magnetic Prandtl number of the solar corona, heating is expected to happen predominantly through viscous dissipation. We find that reasonable solutions can be obtained with values of the reduced speed of light just marginally larger than the maximum sound speed. Overall this leads to a fully explicit code that can compute the time evolution of the solar corona in response to photospheric driving using numerical time steps not much smaller than 0.1 s. Numerical simulations of the coronal response to flux emergence covering a time span of a few days are well within reach using this approach.
Frutos-Alfaro, Francisco; Carboni-Mendez, Rodrigo
2015-01-01
A program to generate codes in Fortran and C of the full Magnetohydrodynamic equations is shown. The program used the free computer algebra system software REDUCE. This software has a package called EXCALC, which is an exterior calculus program. The advantage of this program is that it can be modified to include another complex metric or spacetime. The output of this program is modified by means of a LINUX script which creates a new REDUCE program to manipulate the MHD equations to obtain a c...
Reuter, K.; Jenko, F.; Forest, C. B.; Bayliss, R. A.
2008-08-01
A parallel implementation of a nonlinear pseudo-spectral MHD code for the simulation of turbulent dynamos in spherical geometry is reported. It employs a dual domain decomposition technique in both real and spectral space. It is shown that this method shows nearly ideal scaling going up to 128 CPUs on Beowulf-type clusters with fast interconnect. Furthermore, the potential of exploiting single precision arithmetic on standard x86 processors is examined. It is pointed out that the MHD code thereby achieves a maximum speedup of 1.7, whereas the validity of the computations is still granted. The combination of both measures will allow for the direct numerical simulation of highly turbulent cases ( 1500
Large Scale Earth’s Bow Shock with Northern IMF as Simulated by PIC Code in Parallel with MHD Model
Suleiman Baraka
2016-06-01
In this paper, we propose a 3D kinetic model (particle-in-cell, PIC) for the description of the large scale Earth’s bow shock. The proposed version is stable and does not require huge or extensive computer resources. Because PIC simulations work with scaled plasma and field parameters, we also propose to validate our code by comparing its results with the available MHD simulations under same scaled solar wind (SW) and (IMF) conditions. We report new results from the two models. In both codes the Earth’s bow shock position is found to be $\\approx 14.8 R_{{\\rm E}}$ along the Sun–Earth line, and $\\approx 29 R_{{\\rm E}}$ on the dusk side. Those findings are consistent with past in situ observations. Both simulations reproduce the theoretical jump conditions at the shock. However, the PIC code density and temperature distributions are inflated and slightly shifted sunward when compared to the MHD results. Kinetic electron motions and reflected ions upstream may cause this sunward shift. Species distributions in the foreshock region are depicted within the transition of the shock (measured $\\approx$2$c/\\omega_{pi}$ for $ \\Theta_{Bn}=90^{\\circ}$ and $M_{{\\rm MS}} = 4.7 $) and in the downstream. The size of the foot jump in the magnetic field at the shock is measured to be ($1.7 c/ \\omega_{pi} $). In the foreshocked region, the thermal velocity is found equal to 213 km $s^{−1}$ at $15R_{{\\rm E}}$ and is equal to $63 km s^{-1}$ at $12 R_{{\\rm E}}$ (magnetosheath region). Despite the large cell size of the current version of the PIC code, it is powerful to retain macrostructure of planets magnetospheres in very short time, thus it can be used for pedagogical test purposes. It is also likely complementary with MHD to deepen our understanding of the large scale magnetosphere.
Large Scale Earth's Bow Shock with Northern IMF as simulated by PIC code in parallel with MHD model
Baraka, Suleiman M
2016-01-01
In this paper, we propose a 3D kinetic model (Particle-in-Cell PIC ) for the description of the large scale Earth's bow shock. The proposed version is stable and does not require huge or extensive computer resources. Because PIC simulations work with scaled plasma and field parameters, we also propose to validate our code by comparing its results with the available MHD simulations under same scaled Solar wind ( SW ) and ( IMF ) conditions. We report new results from the two models. In both codes the Earth's bow shock position is found to be ~14.8 RE along the Sun-Earth line, and ~ 29 RE on the dusk side. Those findings are consistent with past in situ observations. Both simulations reproduce the theoretical jump conditions at the shock. However, the PIC code density and temperature distributions are inflated and slightly shifted sunward when compared to the MHD results. Kinetic electron motions and reflected ions upstream may cause this sunward shift. Species distributions in the foreshock region are depicted...
A New Code for Numerical Simulation of MHD Astrophysical Flows With Chemistry
Kulikov, Igor; Protasov, Viktor
2016-01-01
The new code for numerical simulation of magnetic hydrodynamical astrophysical flows with consideration of chemical reactions is given in the paper. At the heart of the code - the new original low-dissipation numerical method based on a combination of operator splitting approach and piecewise-parabolic method on the local stencil. The details of the numerical method are described; the main tests and the scheme of parallel implementation are shown. The chemodynamics of the hydrogen while the turbulent formation of molecular clouds is modeled.
M. Schüssler
Full Text Available Two aspects of solar MHD are discussed in relation to the work of the MHD simulation group at KIS. Photospheric magneto-convection, the nonlinear interaction of magnetic field and convection in a strongly stratified, radiating fluid, is a key process of general astrophysical relevance. Comprehensive numerical simulations including radiative transfer have significantly improved our understanding of the processes and have become an important tool for the interpretation of observational data. Examples of field intensification in the solar photosphere ('convective collapse' are shown. The second line of research is concerned with the dynamics of flux tubes in the convection zone, which has far-reaching implications for our understanding of the solar dynamo. Simulations indicate that the field strength in the region where the flux is stored before erupting to form sunspot groups is of the order of 10^{5} G, an order of magnitude larger than previous estimates based on equipartition with the kinetic energy of convective flows.
Key words. Solar physics · astrophysics and astronomy (photosphere and chromosphere; stellar interiors and dynamo theory; numerical simulation studies.
Passive stabilization in a linear MHD stability code
Todd, A.M.M.
1980-03-01
Utilizing a Galerkin procedure to calculate the vacuum contribution to the ideal MHD Lagrangian, the implementation of realistic boundary conditions are described in a linear stability code. The procedure permits calculation of the effect of arbitrary conducting structure on ideal MHD instabilities, as opposed to the prior use of an encircling shell. The passive stabilization of conducting coils on the tokamak vertical instability is calculated within the PEST code and gives excellent agreement with 2-D time dependent simulations of PDX.
Marx, Alain; Lütjens, Hinrich
2017-03-01
A hybrid MPI/OpenMP parallel version of the XTOR-2F code [Lütjens and Luciani, J. Comput. Phys. 229 (2010) 8130] solving the two-fluid MHD equations in full tokamak geometry by means of an iterative Newton-Krylov matrix-free method has been developed. The present work shows that the code has been parallelized significantly despite the numerical profile of the problem solved by XTOR-2F, i.e. a discretization with pseudo-spectral representations in all angular directions, the stiffness of the two-fluid stability problem in tokamaks, and the use of a direct LU decomposition to invert the physical pre-conditioner at every Krylov iteration of the solver. The execution time of the parallelized version is an order of magnitude smaller than the sequential one for low resolution cases, with an increasing speedup when the discretization mesh is refined. Moreover, it allows to perform simulations with higher resolutions, previously forbidden because of memory limitations.
Resistive MHD jet simulations with large resistivity
Cemeljic, Miljenko; Vlahakis, Nektarios; Tsinganos, Kanaris
2009-01-01
Axisymmetric resistive MHD simulations for radially self-similar initial conditions are performed, using the NIRVANA code. The magnetic diffusivity could occur in outflows above an accretion disk, being transferred from the underlying disk into the disk corona by MHD turbulence (anomalous turbulent diffusivity), or as a result of ambipolar diffusion in partially ionized flows. We introduce, in addition to the classical magnetic Reynolds number Rm, which measures the importance of resistive effects in the induction equation, a new number Rb, which measures the importance of the resistive effects in the energy equation. We find two distinct regimes of solutions in our simulations. One is the low-resistivity regime, in which results do not differ much from ideal-MHD solutions. In the high-resistivity regime, results seem to show some periodicity in time-evolution, and depart significantly from the ideal-MHD case. Whether this departure is caused by numerical or physical reasons is of considerable interest for nu...
3D MHD Simulations of Tokamak Disruptions
Woodruff, Simon; Stuber, James
2014-10-01
Two disruption scenarios are modeled numerically by use of the CORSICA 2D equilibrium and NIMROD 3D MHD codes. The work follows the simulations of pressure-driven modes in DIII-D and VDEs in ITER. The aim of the work is to provide starting points for simulation of tokamak disruption mitigation techniques currently in the CDR phase for ITER. Pressure-driven instability growth rates previously observed in simulations of DIIID are verified; Halo and Hiro currents produced during vertical displacements are observed in simulations of ITER with implementation of resistive walls in NIMROD. We discuss plans to exercise new code capabilities and validation.
The CHEASE code for toroidal MHD equilibria
Luetjens, H. [Ecole Polytechnique, 91 - Palaiseau (France). Centre de Physique Theorique; Bondeson, A. [Chalmers Univ. of Technology, Goeteborg (Sweden). Inst. for Electromagnetic Field Theory and Plasma Physics; Sauter, O. [ITER-San Diego, La Jolla, CA (United States)
1996-03-01
CHEASE solves the Grad-Shafranov equation for the MHD equilibrium of a Tokamak-like plasma with pressure and current profiles specified by analytic forms or sets of data points. Equilibria marginally stable to ballooning modes or with a prescribed fraction of bootstrap current can be computed. The code provides a mapping to magnetic flux coordinates, suitable for MHD stability calculations or global wave propagation studies. The code computes equilibrium quantities for the stability codes ERATO, MARS, PEST, NOVA-W and XTOR and for the global wave propagation codes LION and PENN. The two-dimensional MHD equilibrium (Grad-Shafranov) equation is solved in variational form. The discretization uses bicubic Hermite finite elements with continuous first order derivates for the poloidal flux function {Psi}. The nonlinearity of the problem is handled by Picard iteration. The mapping to flux coordinates is carried out with a method which conserves the accuracy of the cubic finite elements. The code uses routines from the CRAY libsci.a program library. However, all these routines are included in the CHEASE package itself. If CHEASE computes equilibrium quantities for MARS with fast Fourier transforms, the NAG library is required. CHEASE is written in standard FORTRAN-77, except for the use of the input facility NAMELIST. CHEASE uses variable names with up to 8 characters, and therefore violates the ANSI standard. CHEASE transfers plot quantities through an external disk file to a plot program named PCHEASE using the UNIRAS or the NCAR plot package. (author) figs., tabs., 34 refs.
MAGNETOHYDRODYNAMIC EQUATIONS (MHD GENERATION CODE
Francisco Frutos Alfaro
2017-04-01
Full Text Available A program to generate codes in Fortran and C of the full magnetohydrodynamic equations is shown. The program uses the free computer algebra system software REDUCE. This software has a package called EXCALC, which is an exterior calculus program. The advantage of this program is that it can be modified to include another complex metric or spacetime. The output of this program is modified by means of a LINUX script which creates a new REDUCE program to manipulate the magnetohydrodynamic equations to obtain a code that can be used as a seed for a magnetohydrodynamic code for numerical applications. As an example, we present part of the output of our programs for Cartesian coordinates and how to do the discretization.
Linear MHD stability studies with the STARWALL code
Merkel, P
2015-01-01
The STARWALL/CAS3D/OPTIM code package is a powerful tool to study the linear MHD stability of 3D, ideal equilibria in the presence of multiply-connected ideal and/or resistive conducting structures, and their feedback stabilization by external currents. Robust feedback stabilization of resistive wall modes can be modelled with the OPTIM code. Resistive MHD studies are possible combining STARWALL with the linear, resistive 2D CASTOR code as well as nonlinear MHD simulations combining STARWALL with the JOREK code. In the present paper, a detailed description of the STARWALL code is given and some of its applications are presented to demonstrate the methods used. Conducting structures are treated in the thin wall approximation and depending on their complexity they are discretized by a spectral method or by triangular finite elements. As an example, a configuration is considered consisting of an ideal plasma surrounded by a vacuum domain containing a resistive wall and bounded by an external wall. Ideal linear M...
Advances in Simulation of Wave Interactions with Extended MHD Phenomena
Batchelor, Donald B [ORNL; D' Azevedo, Eduardo [ORNL; Bateman, Glenn [ORNL; Bernholdt, David E [ORNL; Bonoli, P. [Massachusetts Institute of Technology (MIT); Bramley, Randall B [ORNL; Breslau, Joshua [ORNL; Elwasif, Wael R [ORNL; Foley, S. [Indiana University; Jaeger, Erwin Frederick [ORNL; Jardin, S. C. [Princeton Plasma Physics Laboratory (PPPL); Klasky, Scott A [ORNL; Kruger, Scott E [ORNL; Ku, Long-Poe [ORNL; McCune, Douglas [Princeton Plasma Physics Laboratory (PPPL); Ramos, J. [Massachusetts Institute of Technology (MIT); Schissel, David P [ORNL; Schnack, Dalton D [ORNL
2009-01-01
The Integrated Plasma Simulator (IPS) provides a framework within which some of the most advanced, massively-parallel fusion modeling codes can be interoperated to provide a detailed picture of the multi-physics processes involved in fusion experiments. The presentation will cover four topics: (1) recent improvements to the IPS, (2) application of the IPS for very high resolution simulations of ITER scenarios, (3) studies of resistive and ideal MHD stability in tokamak discharges using IPS facilities, and (4) the application of RF power in the electron cyclotron range of frequencies to control slowly growing MHD modes in tokamaks and initial evaluations of optimized location for RF power deposition.
Advances in Simulation of Wave Interaction with Extended MHD Phenomena
Batchelor, Donald B [ORNL; Abla, Gheni [ORNL; D' Azevedo, Ed F [ORNL; Bateman, Glenn [Lehigh University, Bethlehem, PA; Bernholdt, David E [ORNL; Berry, Lee A [ORNL; Bonoli, P. [Massachusetts Institute of Technology (MIT); Bramley, R [Indiana University; Breslau, Joshua [ORNL; Chance, M. [Princeton Plasma Physics Laboratory (PPPL); Chen, J. [Princeton Plasma Physics Laboratory (PPPL); Choi, M. [General Atomics; Elwasif, Wael R [ORNL; Foley, S. [Indiana University; Fu, GuoYong [Princeton Plasma Physics Laboratory (PPPL); Harvey, R. W. [CompX, Del Mar, CA; Jaeger, Erwin Frederick [ORNL; Jardin, S. C. [Princeton Plasma Physics Laboratory (PPPL); Jenkins, T [University of Wisconsin; Keyes, David E [Columbia University; Klasky, Scott A [ORNL; Kruger, Scott [Tech-X Corporation; Ku, Long-Poe [Princeton Plasma Physics Laboratory (PPPL); Lynch, Vickie E [ORNL; McCune, Douglas [Princeton Plasma Physics Laboratory (PPPL); Ramos, J. [Massachusetts Institute of Technology (MIT); Schissel, D. [General Atomics; Schnack, [University of Wisconsin; Wright, J. [Massachusetts Institute of Technology (MIT)
2009-01-01
The Integrated Plasma Simulator (IPS) provides a framework within which some of the most advanced, massively-parallel fusion modeling codes can be interoperated to provide a detailed picture of the multi-physics processes involved in fusion experiments. The presentation will cover four topics: 1) recent improvements to the IPS, 2) application of the IPS for very high resolution simulations of ITER scenarios, 3) studies of resistive and ideal MHD stability in tokamk discharges using IPS facilities, and 4) the application of RF power in the electron cyclotron range of frequencies to control slowly growing MHD modes in tokamaks and initial evaluations of optimized location for RF power deposition.
Advances in simulation of wave interactions with extended MHD phenomena
Batchelor, D; D' Azevedo, E; Bernholdt, D E; Berry, L; Elwasif, W; Jaeger, E [Oak Ridge National Laboratory (United States); Abla, G; Choi, M [General Atomics (United States); Bateman, G [Lehigh University (United States); Bonoli, P [Plasma Science and Fusion Center, Massachusetts Institute of Technology (United States); Bramley, R; Foley, S [Indiana University (United States); Breslau, J; Chance, M; Chen, J; Fu, G; Jardin, S [Princeton Plasma Physics Laboratory (United States); Harvey, R [CompX International (United States); Jenkins, T [University of Wisconsin (United States); Keyes, D, E-mail: batchelordb@ornl.go [Columbia University (United States)
2009-07-01
The Integrated Plasma Simulator (IPS) provides a framework within which some of the most advanced, massively-parallel fusion modeling codes can be interoperated to provide a detailed picture of the multi-physics processes involved in fusion experiments. The presentation will cover four topics: 1) recent improvements to the IPS, 2) application of the IPS for very high resolution simulations of ITER scenarios, 3) studies of resistive and ideal MHD stability in tokamk discharges using IPS facilities, and 4) the application of RF power in the electron cyclotron range of frequencies to control slowly growing MHD modes in tokamaks and initial evaluations of optimized location for RF power deposition.
Modified NASA-Lewis Chemical Equilibrium Code for MHD applications
Sacks, R. A.; Geyer, H. K.; Grammel, S. J.; Doss, E. D.
1979-12-01
A substantially modified version of the NASA-Lewis Chemical Equilibrium Code has recently been developed. The modifications were designed to extend the power and convenience of the Code as a tool for performing combustor analysis for MHD systems studies. This report describes the effect of the programming details from a user point of view, but does not describe the Code in detail.
Global MHD simulations of Neptune's magnetosphere
Mejnertsen, L.; Eastwood, J. P.; Chittenden, J. P.; Masters, A.
2016-08-01
A global magnetohydrodynamic (MHD) simulation has been performed in order to investigate the outer boundaries of Neptune's magnetosphere at the time of Voyager 2's flyby in 1989 and to better understand the dynamics of magnetospheres formed by highly inclined planetary dipoles. Using the MHD code Gorgon, we have implemented a precessing dipole to mimic Neptune's tilted magnetic field and rotation axes. By using the solar wind parameters measured by Voyager 2, the simulation is verified by finding good agreement with Voyager 2 magnetometer observations. Overall, there is a large-scale reconfiguration of magnetic topology and plasma distribution. During the "pole-on" magnetospheric configuration, there only exists one tail current sheet, contained between a rarefied lobe region which extends outward from the dayside cusp, and a lobe region attached to the nightside cusp. It is found that the tail current always closes to the magnetopause current system, rather than closing in on itself, as suggested by other models. The bow shock position and shape is found to be dependent on Neptune's daily rotation, with maximum standoff being during the pole-on case. Reconnection is found on the magnetopause but is highly modulated by the interplanetary magnetic field (IMF) and time of day, turning "off" and "on" when the magnetic shear between the IMF and planetary fields is large enough. The simulation shows that the most likely location for reconnection to occur during Voyager 2's flyby was far from the spacecraft trajectory, which may explain the relative lack of associated signatures in the observations.
Simulation of wave interactions with MHD
Batchelor, D; Bernholdt, D; Berry, L; Elwasif, W; Jaeger, E; Keyes, D; Klasky, S [Oak Ridge National Laboratory, Oak Ridge, TN 37331 (United States); Alba, C; Choi, M [General Atomics, San Diego, CA 92186 (United States); Bateman, G [Lehigh University, Bethlehem, PA 18015 (United States); Bonoli, P [Plasma Science and Fusion Center, MTT, Cambridge, MA 02139 (United States); Bramley, R [Indiana University, Bloomington, IN 47405 (United States); Breslau, J; Chance, M; Chen, J; Fu, G; Jardin, S [Princeton Plasma Physics Laboratory, Princeton, NJ 08543 (United States); Harvey, R [CompX, Del Mar, CA 92014 (United States); Jenkins, T [University of Wisconsin, Madison, WI 53706 (United States); Kruger, S [Tech-X, Boulder, CO 80303 (United States)], E-mail: batchelordb@ornl.gov (and others)
2008-07-15
The broad scientific objectives of the SWIM (Simulation 01 Wave Interaction with MHD) project are twofold: (1) improve our understanding of interactions that both radio frequency (RF) wave and particle sources have on extended-MHD phenomena, and to substantially improve our capability for predicting and optimizing the performance of burning plasmas in devices such as ITER: and (2) develop an integrated computational system for treating multiphysics phenomena with the required flexibility and extensibility to serve as a prototype for the Fusion Simulation Project. The Integrated Plasma Simulator (IPS) has been implemented. Presented here are initial physics results on RP effects on MHD instabilities in tokamaks as well as simulation results for tokamak discharge evolution using the IPS.
Simulation of wave interactions with MHD
Batchelor, Donald B [ORNL; Abla, G [General Atomics, San Diego; Bateman, Glenn [Lehigh University, Bethlehem, PA; Bernholdt, David E [ORNL; Berry, Lee A [ORNL; Bonoli, P. [Massachusetts Institute of Technology (MIT); Bramley, R [Indiana University; Breslau, J. [Princeton Plasma Physics Laboratory (PPPL); Chance, M. [Princeton Plasma Physics Laboratory (PPPL); Chen, J. [Princeton Plasma Physics Laboratory (PPPL); Choi, M. [General Atomics; Elwasif, Wael R [ORNL; Fu, GuoYong [Princeton Plasma Physics Laboratory (PPPL); Harvey, R. W. [CompX, Del Mar, CA; Jaeger, Erwin Frederick [ORNL; Jardin, S. C. [Princeton Plasma Physics Laboratory (PPPL); Jenkins, T [University of Wisconsin; Keyes, David E [Columbia University; Klasky, Scott A [ORNL; Kruger, Scott [Tech-X Corporation; Ku, Long-Poe [Princeton Plasma Physics Laboratory (PPPL); Lynch, Vickie E [ORNL; McCune, Douglas [Princeton Plasma Physics Laboratory (PPPL); Ramos, J. [Massachusetts Institute of Technology (MIT); Schissel, D. [General Atomics; Schnack, [University of Wisconsin; Wright, J. [Massachusetts Institute of Technology (MIT)
2008-07-01
The broad scientific objectives of the SWIM (Simulation of Wave Interaction with MHD) project are twofold: (1) improve our understanding of interactions that both radio frequency (RF) wave and particle sources have on extended-MHD phenomena, and to substantially improve our capability for predicting and optimizing the performance of burning plasmas in devices such as ITER: and (2) develop an integrated computational system for treating multiphysics phenomena with the required flexibility and extensibility to serve as a prototype for the Fusion Simulation Project. The Integrated Plasma Simulator (IPS) has been implemented. Presented here are initial physics results on RF effects on MHD instabilities in tokamaks as well as simulation results for tokamak discharge evolution using the IPS.
MHD simulations on an unstructured mesh
Strauss, H.R. [New York Univ., NY (United States); Park, W.; Belova, E.; Fu, G.Y. [Princeton Univ., NJ (United States). Plasma Physics Lab.; Longcope, D.W. [Univ. of Montana, Missoula, MT (United States); Sugiyama, L.E. [Massachusetts Inst. of Tech., Cambridge, MA (United States)
1998-12-31
Two reasons for using an unstructured computational mesh are adaptivity, and alignment with arbitrarily shaped boundaries. Two codes which use finite element discretization on an unstructured mesh are described. FEM3D solves 2D and 3D RMHD using an adaptive grid. MH3D++, which incorporates methods of FEM3D into the MH3D generalized MHD code, can be used with shaped boundaries, which might be 3D.
Simulation of MHD collimation from differential rotation
Carey, Christopher
2005-10-01
Recent observations indicate that astrophysical outflows from active galactic nuclei are permeated with helical magnetic fields[1]. The most promising theory for the formation of the magnetic configurations in these magnetically driven jets is the coiling of an initial seed field by the differential rotation of the accretion disk surrounding the central object. We have begun simulations that are relevant to these Poynting jets using the NIMROD code[2]. To simulate dynamics on length scales that are significantly larger than the accretion disk, the non-relativistic MHD equations are evolved on a hemispherical logarithmic mesh. The accretion disk is treated as a condition on the lower boundary by applying a Keplerian velocity to the azimuthal component of the fluid velocity and a prescribed flux of mass through the boundary. The magnetic field configuration is initialized to a dipole like field. Formation of a jet outflow is observed later in time. The initial field is coiled up and collimated, driving a large current density on the axis of symmetry. Slipping of magnetic field lines due to non-ideal effects has been investigated. 1. Asada K. et. al., Pub. of the Astr. Soc. of Japan, 54, L39-L43, 2002 2. Sovinec C. et. al., J. Comp. Phys., 195, 355-386, 2004
Pseudo-reconnection in MHD numerical simulation
无
2000-01-01
A class of pseudo-reconnections caused by a shifted mesh in magnetohydrodynamics (MHD) simulations is reported. In terms of this mesh system, some non-physical results may be obtained in certain circumstances, e.g. magnetic reconnection occurs without resistivity. After comparison, another kind of mesh is strongly recommended.
On the measurements of numerical viscosity and resistivity in Eulerian MHD codes
Rembiasz, Tomasz; Cerdá-Durán, Pablo; Aloy, Miguel-Ángel; Müller, Ewald
2016-01-01
We propose a simple ansatz for estimating the value of the numerical resistivity and the numerical viscosity of any Eulerian MHD code. We test this ansatz with the help of simulations of the propagation of (magneto)sonic waves, Alfven waves, and the tearing mode instability using the MHD code Aenus. By comparing the simu- lation results with analytical solutions of the resistive-viscous MHD equations and an empirical ansatz for the growth rate of tearing modes we measure the numerical viscosity and resistivity of Aenus. The comparison shows that the fast-magnetosonic speed and wavelength are the characteristic velocity and length, respectively, of the aforementioned (relatively simple) systems. We also determine the dependance of the numerical viscosity and resistivity on the time integration method, the spatial reconstruction scheme and (to a lesser extent) the Riemann solver employed in the simulations. From the measured results we infer the numerical resolution (as a function of the spatial reconstruction ...
Inductive ionospheric solver for magnetospheric MHD simulations
H. Vanhamäki
2011-01-01
Full Text Available We present a new scheme for solving the ionospheric boundary conditions required in magnetospheric MHD simulations. In contrast to the electrostatic ionospheric solvers currently in use, the new solver takes ionospheric induction into account by solving Faraday's law simultaneously with Ohm's law and current continuity. From the viewpoint of an MHD simulation, the new inductive solver is similar to the electrostatic solvers, as the same input data is used (field-aligned current [FAC] and ionospheric conductances and similar output is produced (ionospheric electric field. The inductive solver is tested using realistic, databased models of an omega-band and westward traveling surge. Although the tests were performed with local models and MHD simulations require a global ionospheric solution, we may nevertheless conclude that the new solution scheme is feasible also in practice. In the test cases the difference between static and electrodynamic solutions is up to ~10 V km^{−1} in certain locations, or up to 20-40% of the total electric field. This is in agreement with previous estimates. It should also be noted that if FAC is replaced by the ground magnetic field (or ionospheric equivalent current in the input data set, exactly the same formalism can be used to construct an inductive version of the KRM method originally developed by Kamide et al. (1981.
Inductive ionospheric solver for magnetospheric MHD simulations
Vanhamäki, H.
2011-01-01
We present a new scheme for solving the ionospheric boundary conditions required in magnetospheric MHD simulations. In contrast to the electrostatic ionospheric solvers currently in use, the new solver takes ionospheric induction into account by solving Faraday's law simultaneously with Ohm's law and current continuity. From the viewpoint of an MHD simulation, the new inductive solver is similar to the electrostatic solvers, as the same input data is used (field-aligned current [FAC] and ionospheric conductances) and similar output is produced (ionospheric electric field). The inductive solver is tested using realistic, databased models of an omega-band and westward traveling surge. Although the tests were performed with local models and MHD simulations require a global ionospheric solution, we may nevertheless conclude that the new solution scheme is feasible also in practice. In the test cases the difference between static and electrodynamic solutions is up to ~10 V km-1 in certain locations, or up to 20-40% of the total electric field. This is in agreement with previous estimates. It should also be noted that if FAC is replaced by the ground magnetic field (or ionospheric equivalent current) in the input data set, exactly the same formalism can be used to construct an inductive version of the KRM method originally developed by Kamide et al. (1981).
CAFE: A NEW RELATIVISTIC MHD CODE
Lora-Clavijo, F. D.; Cruz-Osorio, A. [Instituto de Astronomía, Universidad Nacional Autónoma de México, AP 70-264, Distrito Federal 04510, México (Mexico); Guzmán, F. S., E-mail: fdlora@astro.unam.mx, E-mail: aosorio@astro.unam.mx, E-mail: guzman@ifm.umich.mx [Instituto de Física y Matemáticas, Universidad Michoacana de San Nicolás de Hidalgo. Edificio C-3, Cd. Universitaria, 58040 Morelia, Michoacán, México (Mexico)
2015-06-22
We introduce CAFE, a new independent code designed to solve the equations of relativistic ideal magnetohydrodynamics (RMHD) in three dimensions. We present the standard tests for an RMHD code and for the relativistic hydrodynamics regime because we have not reported them before. The tests include the one-dimensional Riemann problems related to blast waves, head-on collisions of streams, and states with transverse velocities, with and without magnetic field, which is aligned or transverse, constant or discontinuous across the initial discontinuity. Among the two-dimensional (2D) and 3D tests without magnetic field, we include the 2D Riemann problem, a one-dimensional shock tube along a diagonal, the high-speed Emery wind tunnel, the Kelvin–Helmholtz (KH) instability, a set of jets, and a 3D spherical blast wave, whereas in the presence of a magnetic field we show the magnetic rotor, the cylindrical explosion, a case of Kelvin–Helmholtz instability, and a 3D magnetic field advection loop. The code uses high-resolution shock-capturing methods, and we present the error analysis for a combination that uses the Harten, Lax, van Leer, and Einfeldt (HLLE) flux formula combined with a linear, piecewise parabolic method and fifth-order weighted essentially nonoscillatory reconstructors. We use the flux-constrained transport and the divergence cleaning methods to control the divergence-free magnetic field constraint.
CAFE: A New Relativistic MHD Code
Lora-Clavijo, F D; Guzman, F S
2014-01-01
We present CAFE, a new independent code designed to solve the equations of Relativistic ideal Magnetohydrodynamics (RMHD) in 3D. We present the standard tests for a RMHD code and for the Relativistic Hydrodynamics (RMD) regime since we have not reported them before. The tests include the 1D Riemann problems related to blast waves, head-on collision of streams and states with transverse velocities, with and without magnetic field, which is aligned or transverse, constant or discontinuous across the initial discontinuity. Among the 2D tests, without magnetic field we include the 2D Riemann problem, the high speed Emery wind tunnel, the Kelvin-Helmholtz instability test and a set of jets, whereas in the presence of a magnetic field we show the magnetic rotor, the cylindrical explosion and the Kelvin-Helmholtz instability. The code uses High Resolution Shock Capturing methods and as a standard set up we present the error analysis with a simple combination that uses the HLLE flux formula combined with linear, PPM ...
CAFE: A New Relativistic MHD Code
Lora-Clavijo, F. D.; Cruz-Osorio, A.; Guzmán, F. S.
2015-06-01
We introduce CAFE, a new independent code designed to solve the equations of relativistic ideal magnetohydrodynamics (RMHD) in three dimensions. We present the standard tests for an RMHD code and for the relativistic hydrodynamics regime because we have not reported them before. The tests include the one-dimensional Riemann problems related to blast waves, head-on collisions of streams, and states with transverse velocities, with and without magnetic field, which is aligned or transverse, constant or discontinuous across the initial discontinuity. Among the two-dimensional (2D) and 3D tests without magnetic field, we include the 2D Riemann problem, a one-dimensional shock tube along a diagonal, the high-speed Emery wind tunnel, the Kelvin-Helmholtz (KH) instability, a set of jets, and a 3D spherical blast wave, whereas in the presence of a magnetic field we show the magnetic rotor, the cylindrical explosion, a case of Kelvin-Helmholtz instability, and a 3D magnetic field advection loop. The code uses high-resolution shock-capturing methods, and we present the error analysis for a combination that uses the Harten, Lax, van Leer, and Einfeldt (HLLE) flux formula combined with a linear, piecewise parabolic method and fifth-order weighted essentially nonoscillatory reconstructors. We use the flux-constrained transport and the divergence cleaning methods to control the divergence-free magnetic field constraint.
Porting a Hall MHD Code to a Graphic Processing Unit
Dorelli, John C.
2011-01-01
We present our experience porting a Hall MHD code to a Graphics Processing Unit (GPU). The code is a 2nd order accurate MUSCL-Hancock scheme which makes use of an HLL Riemann solver to compute numerical fluxes and second-order finite differences to compute the Hall contribution to the electric field. The divergence of the magnetic field is controlled with Dedner?s hyperbolic divergence cleaning method. Preliminary benchmark tests indicate a speedup (relative to a single Nehalem core) of 58x for a double precision calculation. We discuss scaling issues which arise when distributing work across multiple GPUs in a CPU-GPU cluster.
A Fast MHD Code for Gravitationally Stratified Media using Graphical Processing Units: SMAUG
M. K. Griffiths; V. Fedun; R.Erdélyi
2015-03-01
Parallelization techniques have been exploited most successfully by the gaming/graphics industry with the adoption of graphical processing units (GPUs), possessing hundreds of processor cores. The opportunity has been recognized by the computational sciences and engineering communities, who have recently harnessed successfully the numerical performance of GPUs. For example, parallel magnetohydrodynamic (MHD) algorithms are important for numerical modelling of highly inhomogeneous solar, astrophysical and geophysical plasmas. Here, we describe the implementation of SMAUG, the Sheffield Magnetohydrodynamics Algorithm Using GPUs. SMAUG is a 1–3D MHD code capable of modelling magnetized and gravitationally stratified plasma. The objective of this paper is to present the numerical methods and techniques used for porting the code to this novel and highly parallel compute architecture. The methods employed are justified by the performance benchmarks and validation results demonstrating that the code successfully simulates the physics for a range of test scenarios including a full 3D realistic model of wave propagation in the solar atmosphere.
Coupled simulation of kinetic pedestal growth and MHD ELM crash
Park, G [Courant Institute of Mathematical Sciences, New York University (United States); Cummings, J [California Institute of Technology (United States); Chang, C S [Courant Institute of Mathematical Sciences, New York University (United States); Podhorszki, N [Univ. California at Davis (United States); Klasky, S [ORNL (United States); Ku, S [Courant Institute of Mathematical Sciences, New York University (United States); Pankin, A [Lehigh Univ. (United States); Samtaney, R [Princeton Plasma Physics Laboratory (United States); Shoshani, A [LBNL (United States); Snyder, P [General Atomics (United States); Strauss, H [Courant Institute of Mathematical Sciences, New York University (United States); Sugiyama, L [MIT (United States)
2007-07-15
Edge pedestal height and the accompanying ELM crash are critical elements of ITER physics yet to be understood and predicted through high performance computing. An entirely self-consistent first principles simulation is being pursued as a long term research goal, and the plan is planned for completion in time for ITER operation. However, a proof-of-principle work has already been established using a computational tool that employs the best first principles physics available at the present time. A kinetic edge equilibrium code XGC0, which can simulate the neoclassically dominant pedestal growth from neutral ionization (using a phenomenological residual turbulence diffusion motion superposed upon the neoclassical particle motion) is coupled to an extended MHD code M3D, which can perform the nonlinear ELM crash. The stability boundary of the pedestal is checked by an ideal MHD linear peeling-ballooning code, which has been validated against many experimental data sets for the large scale (type I) ELMs onset boundary. The coupling workflow and scientific results to be enabled by it are described.
MHD simulation studies of z-pinch shear flow stabilization
Paraschiv, I.; Bauer, B. S.; Sotnikov, V. I.; Makhin, V.; Siemon, R. E.
2003-10-01
The development of the m=0 instability in a z-pinch in the presence of sheared plasma flows is investigated with the aid of a two-dimensional magnetohydrodynamic (MHD) simulation code (MHRDR). The linear growth rates are compared to the results obtained by solving the ideal MHD linearized equations [1] and to the results obtained using a 3D hybrid simulation code [2]. The instability development is followed into the nonlinear regime where its growth and saturation are examined. [1] V.I. Sotnikov, I. Paraschiv, V. Makhin, B.S. Bauer, J.-N. Leboeuf, and J.M. Dawson, "Linear analysis of sheared flow stabilization of global magnetohydrodynamic instabilities based on the Hall fluid mode", Phys. Plasmas 9, 913 (2002). [2] V.I. Sotnikov, V. Makhin, B.S. Bauer, P. Hellinger, P. Travnicek, V. Fiala, J.-N. Leboeuf, "Hybrid Simulations of Current-Carrying Instabilities in Z-pinch Plasmas with Sheared Axial Flow", AIP Conference Proceedings, Volume 651, Dense Z-Pinches: 5th International Conference on Dense Z-Pinches, edited by J. Davis et al., page 396, June 2002.
Understanding Accretion Disks through Three Dimensional Radiation MHD Simulations
Jiang, Yan-Fei
I study the structures and thermal properties of black hole accretion disks in the radiation pressure dominated regime. Angular momentum transfer in the disk is provided by the turbulence generated by the magneto-rotational instability (MRI), which is calculated self-consistently with a recently developed 3D radiation magneto-hydrodynamics (MHD) code based on Athena. This code, developed by my collaborators and myself, couples both the radiation momentum and energy source terms with the ideal MHD equations by modifying the standard Godunov method to handle the stiff radiation source terms. We solve the two momentum equations of the radiation transfer equations with a variable Eddington tensor (VET), which is calculated with a time independent short characteristic module. This code is well tested and accurate in both optically thin and optically thick regimes. It is also accurate for both radiation pressure and gas pressure dominated flows. With this code, I find that when photon viscosity becomes significant, the ratio between Maxwell stress and Reynolds stress from the MRI turbulence can increase significantly with radiation pressure. The thermal instability of the radiation pressure dominated disk is then studied with vertically stratified shearing box simulations. Unlike the previous results claiming that the radiation pressure dominated disk with MRI turbulence can reach a steady state without showing any unstable behavior, I find that the radiation pressure dominated disks always either collapse or expand until we have to stop the simulations. During the thermal runaway, the heating and cooling rates from the simulations are consistent with the general criterion of thermal instability. However, details of the thermal runaway are different from the predictions of the standard alpha disk model, as many assumptions in that model are not satisfied in the simulations. We also identify the key reasons why previous simulations do not find the instability. The thermal
The 3D MHD code GOEMHD3 for large-Reynolds-number astrophysical plasmas
Skála, J; Büchner, J; Rampp, M
2014-01-01
The numerical simulation of turbulence and flows in almost ideal, large-Reynolds-number astrophysical plasmas motivates the implementation of almost conservative MHD computer codes. They should efficiently calculate, use highly parallelized schemes scaling well with large numbers of CPU cores, allows to obtain a high grid resolution over large simulation domains and which can easily be adapted to new computer architectures as well as to new initial and boundary conditions, allow modular extensions. The new massively parallel simulation code GOEMHD3 enables efficient and fast simulations of almost ideal, large-Reynolds-number astrophysical plasma flows, well resolved and on huge grids covering large domains. Its abilities are validated by major tests of ideal and weakly dissipative plasma phenomena. The high resolution ($2048^3$ grid points) simulation of a large part of the solar corona above an observed active region proved the excellent parallel scalability of the code using more than 30.000 processor cores...
On the Measurements of Numerical Viscosity and Resistivity in Eulerian MHD Codes
Rembiasz, Tomasz; Obergaulinger, Martin; Cerdá-Durán, Pablo; Aloy, Miguel-Ángel; Müller, Ewald
2017-06-01
We propose a simple ansatz for estimating the value of the numerical resistivity and the numerical viscosity of any Eulerian MHD code. We test this ansatz with the help of simulations of the propagation of (magneto)sonic waves, Alfvén waves, and the tearing mode (TM) instability using the MHD code Aenus. By comparing the simulation results with analytical solutions of the resistive-viscous MHD equations and an empirical ansatz for the growth rate of TMs, we measure the numerical viscosity and resistivity of Aenus. The comparison shows that the fast magnetosonic speed and wavelength are the characteristic velocity and length, respectively, of the aforementioned (relatively simple) systems. We also determine the dependence of the numerical viscosity and resistivity on the time integration method, the spatial reconstruction scheme and (to a lesser extent) the Riemann solver employed in the simulations. From the measured results, we infer the numerical resolution (as a function of the spatial reconstruction method) required to properly resolve the growth and saturation level of the magnetic field amplified by the magnetorotational instability in the post-collapsed core of massive stars. Our results show that it is most advantageous to resort to ultra-high-order methods (e.g., the ninth-order monotonicity-preserving method) to tackle this problem properly, in particular, in three-dimensional simulations.
Intensity contrast from MHD simulations and from HINODE observations
Afram, N; Solanki, S K; Schuessler, M; Lagg, A; Voegler, A
2010-01-01
Changes in the solar surface area covered by small-scale magnetic elements are thought to cause long-term changes in the solar spectral irradiance, which are important for determining the impact on Earth's climate. To study the effect of small-scale magnetic elements on total and spectral irradiance, we derive their contrasts from 3-D MHD simulations of the solar atmosphere. Such calculations are necessary since measurements of small-scale flux tube contrasts are confined to a few wavelengths and suffer from scattered light and instrument defocus, even for space observations. To test the contrast calculations, we compare rms contrasts from simulations with those obtained with the broad-band filter imager mounted on the Solar Optical Telescope (SOT) onboard the Hinode satellite and also analyse centre-to-limb variations (CLV). The 3-D MHD simulations include the interaction between convection and magnetic flux tubes. They have been run with non-grey radiative transfer using the MURaM code. Simulations have an ...
Li, Xujing; Zheng, Weiying
2016-10-01
A new parallel code based on discontinuous Galerkin (DG) method for hyperbolic conservation laws on three dimensional unstructured meshes is developed recently. This code can be used for simulations of MHD equations, which are very important in magnetic confined plasma research. The main challenges in MHD simulations in fusion include the complex geometry of the configurations, such as plasma in tokamaks, the possibly discontinuous solutions and large scale computing. Our new developed code is based on three dimensional unstructured meshes, i.e. tetrahedron. This makes the code flexible to arbitrary geometries. Second order polynomials are used on each element and HWENO type limiter are applied. The accuracy tests show that our scheme reaches the desired three order accuracy and the nonlinear shock test demonstrate that our code can capture the sharp shock transitions. Moreover, One of the advantages of DG compared with the classical finite element methods is that the matrices solved are localized on each element, making it easy for parallelization. Several simulations including the kink instabilities in toroidal geometry will be present here. Chinese National Magnetic Confinement Fusion Science Program 2015GB110003.
Nonlinear evolution of parallel propagating Alfven waves: Vlasov - MHD simulation
Nariyuki, Y; Kumashiro, T; Hada, T
2009-01-01
Nonlinear evolution of circularly polarized Alfv\\'en waves are discussed by using the recently developed Vlasov-MHD code, which is a generalized Landau-fluid model. The numerical results indicate that as far as the nonlinearity in the system is not so large, the Vlasov-MHD model can validly solve time evolution of the Alfv\\'enic turbulence both in the linear and nonlinear stages. The present Vlasov-MHD model is proper to discuss the solar coronal heating and solar wind acceleration by Alfve\\'n waves propagating from the photosphere.
A new MHD code with adaptive mesh refinement and parallelization for astrophysics
Jiang, R.-L.; Fang, C.; Chen, P.-F.
2012-08-01
A new code, named MAP, is written in FORTRAN language for magnetohydrodynamics (MHD) simulations with the adaptive mesh refinement (AMR) and Message Passing Interface (MPI) parallelization. There are several optional numerical schemes for computing the MHD part, namely, modified Mac Cormack Scheme (MMC), Lax-Friedrichs scheme (LF), and weighted essentially non-oscillatory (WENO) scheme. All of them are second-order, two-step, component-wise schemes for hyperbolic conservative equations. The total variation diminishing (TVD) limiters and approximate Riemann solvers are also equipped. A high resolution can be achieved by the hierarchical block-structured AMR mesh. We use the extended generalized Lagrange multiplier (EGLM) MHD equations to reduce the non-divergence free error produced by the scheme in the magnetic induction equation. The numerical algorithms for the non-ideal terms, e.g., the resistivity and the thermal conduction, are also equipped in the code. The details of the AMR and MPI algorithms are described in the paper.
MHD Simulation of the Inner-Heliospheric Magnetic Field
Wiengarten, T; Fichtner, H; Cameron, R; Jiang, J; Kissmann, R; Scherer, K; 10.1029/2012JA018089
2013-01-01
Maps of the radial magnetic field at a heliocentric distance of ten solar radii are used as boundary conditions in the MHD code CRONOS to simulate a 3D inner-heliospheric solar wind emanating from the rotating Sun out to 1 AU. The input data for the magnetic field are the result of solar surface flux transport modelling using observational data of sunspot groups coupled with a current sheet source surface model. Amongst several advancements, this allows for higher angular resolution than that of comparable observational data from synoptic magnetograms. The required initial conditions for the other MHD quantities are obtained following an empirical approach using an inverse relation between flux tube expansion and radial solar wind speed. The computations are performed for representative solar minimum and maximum conditions, and the corresponding state of the solar wind up to the Earths orbit is obtained. After a successful comparison of the latter with observational data, they can be used to drive outer-helio...
3D MHD disruptions simulations of tokamaks plasmas
Paccagnella, Roberto; Strauss, Hank; Breslau, Joshua
2008-11-01
Tokamaks Vertical Displacement Events (VDEs) and disruptions simulations in toroidal geometry by means of a single fluid visco-resistive magneto-hydro-dynamic (MHD) model are presented in this paper. The plasma model, implemented in the M3D code [1], is completed with the presence of a 2D homogeneous wall with finite resistivity. This allows the study of the relatively slowly growing magneto-hydro-dynamical perturbation, the resistive wall mode (RWM), which is, in this work, the main drive of the disruptions. Amplitudes and asymmetries of the halo currents pattern at the wall are also calculated and comparisons with tokamak experimental databases and predictions for ITER are given. [1] W. Park, E.V. Belova, G.Y. Fu, X.Z. Tang, H.R. Strauss, L.E. Sugiyama, Phys. Plasmas 6 (1999) 1796.
Realistic radiative MHD simulation of a solar flare
Rempel, Matthias D.; Cheung, Mark; Chintzoglou, Georgios; Chen, Feng; Testa, Paola; Martinez-Sykora, Juan; Sainz Dalda, Alberto; DeRosa, Marc L.; Viktorovna Malanushenko, Anna; Hansteen, Viggo H.; De Pontieu, Bart; Carlsson, Mats; Gudiksen, Boris; McIntosh, Scott W.
2017-08-01
We present a recently developed version of the MURaM radiative MHD code that includes coronal physics in terms of optically thin radiative loss and field aligned heat conduction. The code employs the "Boris correction" (semi-relativistic MHD with a reduced speed of light) and a hyperbolic treatment of heat conduction, which allow for efficient simulations of the photosphere/corona system by avoiding the severe time-step constraints arising from Alfven wave propagation and heat conduction. We demonstrate that this approach can be used even in dynamic phases such as a flare. We consider a setup in which a flare is triggered by flux emergence into a pre-existing bipolar active region. After the coronal energy release, efficient transport of energy along field lines leads to the formation of flare ribbons within seconds. In the flare ribbons we find downflows for temperatures lower than ~5 MK and upflows at higher temperatures. The resulting soft X-ray emission shows a fast rise and slow decay, reaching a peak corresponding to a mid C-class flare. The post reconnection energy release in the corona leads to average particle energies reaching 50 keV (500 MK under the assumption of a thermal plasma). We show that hard X-ray emission from the corona computed under the assumption of thermal bremsstrahlung can produce a power-law spectrum due to the multi-thermal nature of the plasma. The electron energy flux into the flare ribbons (classic heat conduction with free streaming limit) is highly inhomogeneous and reaches peak values of about 3x1011 erg/cm2/s in a small fraction of the ribbons, indicating regions that could potentially produce hard X-ray footpoint sources. We demonstrate that these findings are robust by comparing simulations computed with different values of the saturation heat flux as well as the "reduced speed of light".
Toth, G.; Daldorff, L. K. S.; Jia, X.; Gombosi, T. I.; Lapenta, G.
2014-12-01
We have recently developed a new modeling capability to embed theimplicit Particle-in-Cell (PIC) model iPIC3D into the BATS-R-USmagnetohydrodynamic model. The PIC domain can cover the regions wherekinetic effects are most important, such as reconnection sites. TheBATS-R-US code, on the other hand, can efficiently handle the rest ofthe computational domain where the MHD or Hall MHD description issufficient. As one of the very first applications of the MHD-EPICalgorithm (Daldorff et al. 2014, JCP, 268, 236) we simulate theinteraction between Jupiter's magnetospheric plasma with Ganymede'smagnetosphere, where the separation of kinetic and global scalesappears less severe than for the Earth's magnetosphere. Because theexternal Jovian magnetic field remains in an anti-parallel orientationwith respect to Ganymede's intrinsic magnetic field, magneticreconnection is believed to be the major process that couples the twomagnetospheres. As the PIC model is able to describe self-consistentlythe electron behavior, our coupled MHD-EPIC model is well suited forinvestigating the nature of magnetic reconnection in thisreconnection-driven mini-magnetosphere. We will compare the MHD-EPICsimulations with pure Hall MHD simulations and compare both modelresults with Galileo plasma and magnetic field measurements to assess therelative importance of ion and electron kinetics in controlling theconfiguration and dynamics of Ganymede's magnetosphere.
Nabert, Christian; Othmer, Carsten; Glassmeier, Karl-Heinz
2017-05-01
The interaction of the solar wind with a planetary magnetic field causes electrical currents that modify the magnetic field distribution around the planet. We present an approach to estimating the planetary magnetic field from in situ spacecraft data using a magnetohydrodynamic (MHD) simulation approach. The method is developed with respect to the upcoming BepiColombo mission to planet Mercury aimed at determining the planet's magnetic field and its interior electrical conductivity distribution. In contrast to the widely used empirical models, global MHD simulations allow the calculation of the strongly time-dependent interaction process of the solar wind with the planet. As a first approach, we use a simple MHD simulation code that includes time-dependent solar wind and magnetic field parameters. The planetary parameters are estimated by minimizing the misfit of spacecraft data and simulation results with a gradient-based optimization. As the calculation of gradients with respect to many parameters is usually very time-consuming, we investigate the application of an adjoint MHD model. This adjoint MHD model is generated by an automatic differentiation tool to compute the gradients efficiently. The computational cost for determining the gradient with an adjoint approach is nearly independent of the number of parameters. Our method is validated by application to THEMIS (Time History of Events and Macroscale Interactions during Substorms) magnetosheath data to estimate Earth's dipole moment.
A novel code for numerical 3-D MHD studies of CME expansion
J. Kleimann
2009-03-01
Full Text Available A recent third-order, essentially non-oscillatory central scheme to advance the equations of single-fluid magnetohydrodynamics (MHD in time has been implemented into a new numerical code. This code operates on a 3-D Cartesian, non-staggered grid, and is able to handle shock-like gradients without producing spurious oscillations.
To demonstrate the suitability of our code for the simulation of coronal mass ejections (CMEs and similar heliospheric transients, we present selected results from test cases and perform studies of the solar wind expansion during phases of minimum solar activity. We can demonstrate convergence of the system into a stable Parker-like steady state for both hydrodynamic and MHD winds. The model is subsequently applied to expansion studies of CME-like plasma bubbles, and their evolution is monitored until a stationary state similar to the initial one is achieved. In spite of the model's (current simplicity, we can confirm the CME's nearly self-similar evolution close to the Sun, thus highlighting the importance of detailed modelling especially at small heliospheric radii.
Additionally, alternative methods to implement boundary conditions at the coronal base, as well as strategies to ensure a solenoidal magnetic field, are discussed and evaluated.
Magnetohydrodynamic Simulation Code CANS+: Assessments and Applications
Matsumoto, Yosuke; Kudoh, Yuki; Kawashima, Tomohisa; Matsumoto, Jin; Takahashi, Hiroyuki R; Minoshima, Takashi; Zenitani, Seiji; Miyoshi, Takahiro; Matsumoto, Ryoji
2016-01-01
We present a new magnetohydrodynamic (MHD) simulation code with the aim of providing accurate numerical solutions to astrophysical phenomena where discontinuities, shock waves, and turbulence are inherently important. The code implements the HLLD approximate Riemann solver, the fifth-order-monotonicity-preserving interpolation scheme, and the hyperbolic divergence cleaning method for a magnetic field. This choice of schemes significantly improved numerical accuracy and stability, and saved computational costs in multidimensional problems. Numerical tests of one- and two-dimensional problems showed the advantages of using the high-order scheme by comparing with results from a standard second-order TVD scheme. The present code enabled us to explore long-term evolution of a three-dimensional global accretion disk, in which compressible MHD turbulence saturated at much higher levels via the magneto-rotational instability than that given by the second-order scheme owing to the adoption of the high-resolution, nume...
Application of ADER Scheme in MHD Simulation
ZHANG Yanyan; FENG Xueshang; JIANG Chaowei; ZHOU Yufen
2012-01-01
The Arbitrary accuracy Derivatives Riemann problem method（ADER） scheme is a new high order numerical scheme based on the concept of finite volume integration,and it is very easy to be extended up to any order of space and time accuracy by using a Taylor time expansion at the cell interface position.So far the approach has been applied successfully to flow mechanics problems.Our objective here is to carry out the extension of multidimensional ADER schemes to multidimensional MHD systems of conservation laws by calculating several MHD problems in one and two dimensions： （ⅰ） Brio-Wu shock tube problem,（ⅱ） Dai-Woodward shock tube problem,（ⅲ） Orszag-Tang MHD vortex problem.The numerical results prove that the ADER scheme possesses the ability to solve MHD problem,remains high order accuracy both in space and time,keeps precise in capturing the shock.Meanwhile,the compared tests show that the ADER scheme can restrain the oscillation and obtain the high order non-oscillatory result.
Skála, J.; Baruffa, F.; Büchner, J.; Rampp, M.
2015-08-01
Context. The numerical simulation of turbulence and flows in almost ideal astrophysical plasmas with large Reynolds numbers motivates the implementation of magnetohydrodynamical (MHD) computer codes with low resistivity. They need to be computationally efficient and scale well with large numbers of CPU cores, allow obtaining a high grid resolution over large simulation domains, and be easily and modularly extensible, for instance, to new initial and boundary conditions. Aims: Our aims are the implementation, optimization, and verification of a computationally efficient, highly scalable, and easily extensible low-dissipative MHD simulation code for the numerical investigation of the dynamics of astrophysical plasmas with large Reynolds numbers in three dimensions (3D). Methods: The new GOEMHD3 code discretizes the ideal part of the MHD equations using a fast and efficient leap-frog scheme that is second-order accurate in space and time and whose initial and boundary conditions can easily be modified. For the investigation of diffusive and dissipative processes the corresponding terms are discretized by a DuFort-Frankel scheme. To always fulfill the Courant-Friedrichs-Lewy stability criterion, the time step of the code is adapted dynamically. Numerically induced local oscillations are suppressed by explicit, externally controlled diffusion terms. Non-equidistant grids are implemented, which enhance the spatial resolution, where needed. GOEMHD3 is parallelized based on the hybrid MPI-OpenMP programing paradigm, adopting a standard two-dimensional domain-decomposition approach. Results: The ideal part of the equation solver is verified by performing numerical tests of the evolution of the well-understood Kelvin-Helmholtz instability and of Orszag-Tang vortices. The accuracy of solving the (resistive) induction equation is tested by simulating the decay of a cylindrical current column. Furthermore, we show that the computational performance of the code scales very
FOI-PERFECT code: 3D relaxation MHD modeling and Applications
Wang, Gang-Hua; Duan, Shu-Chao; Comutational Physics Team Team
2016-10-01
One of the challenges in numerical simulations of electromagnetically driven high energy density (HED) systems is the existence of vacuum region. FOI-PERFECT code adopts a full relaxation magnetohydrodynamic (MHD) model. The electromagnetic part of the conventional model adopts the magnetic diffusion approximation. The vacuum region is approximated by artificially increasing the resistivity. On one hand the phase/group velocity is superluminal and hence non-physical in the vacuum region, on the other hand a diffusion equation with large diffusion coefficient can only be solved by implicit scheme which is difficult to be parallelized and converge. A better alternative is to solve the full electromagnetic equations. Maxwell's equations coupled with the constitutive equation, generalized Ohm's law, constitute a relaxation model. The dispersion relation is given to show its transition from electromagnetic propagation in vacuum to resistive MHD in plasma in a natural way. The phase and group velocities are finite for this system. A better time stepping is adopted to give a 3rd full order convergence in time domain without the stiff relaxation term restriction. Therefore it is convenient for explicit & parallel computations. Some numerical results of FOI-PERFECT code are also given. Project supported by the National Natural Science Foundation of China (Grant No. 11571293) And Foundation of China Academy of Engineering Physics (Grant No. 2015B0201023).
High fidelity studies of exploding foil initiator bridges, Part 3: ALEGRA MHD simulations
Neal, William; Garasi, Christopher
2017-01-01
Simulations of high voltage detonators, such as Exploding Bridgewire (EBW) and Exploding Foil Initiators (EFI), have historically been simple, often empirical, one-dimensional models capable of predicting parameters such as current, voltage, and in the case of EFIs, flyer velocity. Experimental methods have correspondingly generally been limited to the same parameters. With the advent of complex, first principles magnetohydrodynamic codes such as ALEGRA and ALE-MHD, it is now possible to simulate these components in three dimensions, and predict a much greater range of parameters than before. A significant improvement in experimental capability was therefore required to ensure these simulations could be adequately verified. In this third paper of a three part study, the experimental results presented in part 2 are compared against 3-dimensional MHD simulations. This improved experimental capability, along with advanced simulations, offer an opportunity to gain a greater understanding of the processes behind the functioning of EBW and EFI detonators.
3D MHD Simulations of Spheromak Compression
Stuber, James E.; Woodruff, Simon; O'Bryan, John; Romero-Talamas, Carlos A.; Darpa Spheromak Team
2015-11-01
The adiabatic compression of compact tori could lead to a compact and hence low cost fusion energy system. The critical scientific issues in spheromak compression relate both to confinement properties and to the stability of the configuration undergoing compression. We present results from the NIMROD code modified with the addition of magnetic field coils that allow us to examine the role of rotation on the stability and confinement of the spheromak (extending prior work for the FRC). We present results from a scan in initial rotation, from 0 to 100km/s. We show that strong rotational shear (10km/s over 1cm) occurs. We compare the simulation results with analytic scaling relations for adiabatic compression. Work performed under DARPA grant N66001-14-1-4044.
Benchmarking a hybrid MHD/kinetic code with C-2 experimental data
Magee, Richard; Clary, Ryan; Dettrick, Sean; Korepanov, Sergey; Onofri, Marco; Smirnov, Artem; TAE Team
2013-10-01
The C-2 device creates field-reversed configuration (FRC) plasmas via the dynamic merging of two compact toroids and heated with neutral beams. Simulations of these plasmas are performed with Q2D - a hybrid MHD/Monte Carlo code that evolves the plasma according to the resistive MHD equations and treats the neutral beam injected fast ions as a minority kinetic species. Recent Q2D runs have resulted in testable predictions, namely that the axial profile of the fast ions is double-peaked, and charge-exchange neutrals are localized in pitch-angle. In some simulations, the fast particle population can induce magnetic fluctuations. These fluctuations are largest in the radial component, have a characteristic frequency approximately equal to the fast ion bounce frequency (f ~ 150 kHz), and a broad k spectrum. These fluctuations have the beneficial effect of smoothing out the double-peaked axial fast ion density profile, resulting in an increased fast ion density at the mid-plane. We will present results from a benchmarking study to quantitatively compare the results of Q2D runs to existing C-2 experimental data.
Further validation of liquid metal MHD code for unstructured grid based on OpenFOAM
Feng, Jingchao; Chen, Hongli, E-mail: hlchen1@ustc.edu.cn; He, Qingyun; Ye, Minyou
2015-11-15
Highlights: • Specific correction scheme has been adopted to revise the calculating result for non-orthogonal meshes. • The developed MHD code based on OpenFOAM platform has been validated by benchmark cases under uniform and non-uniform magnetic field in round and rectangular ducts. • ALEX experimental results have been used to validate the MHD code based on OpenFOAM. - Abstract: In fusion liquid metal blankets, complex geometries involving contractions, expansions, bends, manifolds are very common. The characteristics of liquid metal flow in these geometries are significant. In order to extend the magnetohydrodynamic (MHD) solver developed on OpenFOAM platform to be applied in the complex geometry, the MHD solver based on unstructured meshes has been implemented. The adoption of non-orthogonal correction techniques in the solver makes it possible to process the non-orthogonal meshes in complex geometries. The present paper focused on the validation of the code under critical conditions. An analytical solution benchmark case and two experimental benchmark cases were conducted to validate the code. Benchmark case I is MHD flow in a circular pipe with arbitrary electric conductivity of the walls in a uniform magnetic field. Benchmark cases II and III are experimental cases of 3D laminar steady MHD flow under fringing magnetic field. In all these cases, the numerical results match well with the benchmark cases.
MHD Simulations of the Plasma Flow in the Magnetic Nozzle
Smith, T. E. R.; Keidar, M.; Sankaran, K.; olzin, K. A.
2013-01-01
The magnetohydrodynamic (MHD) flow of plasma through a magnetic nozzle is simulated by solving the governing equations for the plasma flow in the presence of an static magnetic field representing the applied nozzle. This work will numerically investigate the flow and behavior of the plasma as the inlet plasma conditions and magnetic nozzle field strength are varied. The MHD simulations are useful for addressing issues such as plasma detachment and to can be used to gain insight into the physical processes present in plasma flows found in thrusters that use magnetic nozzles. In the model, the MHD equations for a plasma, with separate temperatures calculated for the electrons and ions, are integrated over a finite cell volume with flux through each face computed for each of the conserved variables (mass, momentum, magnetic flux, energy) [1]. Stokes theorem is used to convert the area integrals over the faces of each cell into line integrals around the boundaries of each face. The state of the plasma is described using models of the ionization level, ratio of specific heats, thermal conductivity, and plasma resistivity. Anisotropies in current conduction due to Hall effect are included, and the system is closed using a real-gas equation of state to describe the relationship between the plasma density, temperature, and pressure.A separate magnetostatic solver is used to calculate the applied magnetic field, which is assumed constant for these calculations. The total magnetic field is obtained through superposition of the solution for the applied magnetic field and the self-consistently computed induced magnetic fields that arise as the flowing plasma reacts to the presence of the applied field. A solution for the applied magnetic field is represented in Fig. 1 (from Ref. [2]), exhibiting the classic converging-diverging field pattern. Previous research was able to demonstrate effects such as back-emf at a super-Alfvenic flow, which significantly alters the shape of the
Lattice Boltzmann Large Eddy Simulation Model of MHD
Flint, Christopher
2016-01-01
The work of Ansumali \\textit{et al.}\\cite{Ansumali} is extended to Two Dimensional Magnetohydrodynamic (MHD) turbulence in which energy is cascaded to small spatial scales and thus requires subgrid modeling. Applying large eddy simulation (LES) modeling of the macroscopic fluid equations results in the need to apply ad-hoc closure schemes. LES is applied to a suitable mesoscopic lattice Boltzmann representation from which one can recover the MHD equations in the long wavelength, long time scale Chapman-Enskog limit (i.e., the Knudsen limit). Thus on first performing filter width expansions on the lattice Boltzmann equations followed by the standard small Knudsen expansion on the filtered lattice Boltzmann system results in a closed set of MHD turbulence equations provided we enforce the physical constraint that the subgrid effects first enter the dynamics at the transport time scales. In particular, a multi-time relaxation collision operator is considered for the density distribution function and a single rel...
FARGO3D: A new GPU-oriented MHD code
Benítez-Llambay, Pablo
2016-01-01
We present the FARGO3D code, recently publicly released. It is a magnetohydrodynamics code developed with special emphasis on protoplanetary disks physics and planet-disk interactions, and parallelized with MPI. The hydrodynamics algorithms are based on finite difference upwind, dimensionally split methods. The magnetohydrodynamics algorithms consist of the constrained transport method to preserve the divergence-free property of the magnetic field to machine accuracy, coupled to a method of characteristics for the evaluation of electromotive forces and Lorentz forces. Orbital advection is implemented, and an N-body solver is included to simulate planets or stars interacting with the gas. We present our implementation in detail and present a number of widely known tests for comparison purposes. One strength of FARGO3D is that it can run on both "Graphical Processing Units" (GPUs) or "Central Processing unit" (CPUs), achieving large speed up with respect to CPU cores. We describe our implementation choices, whi...
Coupled Kinetic-MHD Simulations of Divertor Heat Load with ELM Perturbations
Cummings, Julian; Chang, C. S.; Park, Gunyoung; Sugiyama, Linda; Pankin, Alexei; Klasky, Scott; Podhorszki, Norbert; Docan, Ciprian; Parashar, Manish
2010-11-01
The effect of Type-I ELM activity on divertor plate heat load is a key component of the DOE OFES Joint Research Target milestones for this year. In this talk, we present simulations of kinetic edge physics, ELM activity, and the associated divertor heat loads in which we couple the discrete guiding-center neoclassical transport code XGC0 with the nonlinear extended MHD code M3D using the End-to-end Framework for Fusion Integrated Simulations, or EFFIS. In these coupled simulations, the kinetic code and the MHD code run concurrently on the same massively parallel platform and periodic data exchanges are performed using a memory-to-memory coupling technology provided by EFFIS. The M3D code models the fast ELM event and sends frequent updates of the magnetic field perturbations and electrostatic potential to XGC0, which in turn tracks particle dynamics under the influence of these perturbations and collects divertor particle and energy flux statistics. We describe here how EFFIS technologies facilitate these coupled simulations and discuss results for DIII-D, NSTX and Alcator C-Mod tokamak discharges.
Direct numerical simulations of helical dynamo action: MHD and beyond
D. O. Gómez
2004-01-01
Full Text Available Magnetohydrodynamic dynamo action is often invoked to explain the existence of magnetic fields in several astronomical objects. In this work, we present direct numerical simulations of MHD helical dynamos, to study the exponential growth and saturation of magnetic fields. Simulations are made within the framework of incompressible flows and using periodic boundary conditions. The statistical properties of the flow are studied, and it is found that its helicity displays strong spatial fluctuations. Regions with large kinetic helicity are also strongly concentrated in space, forming elongated structures. In dynamo simulations using these flows, we found that the growth rate and the saturation level of magnetic energy and magnetic helicity reach an asymptotic value as the Reynolds number is increased. Finally, extensions of the MHD theory to include kinetic effects relevant in astrophysical environments are discussed.
EVIDENCE OF ACTIVE MHD INSTABILITY IN EULAG-MHD SIMULATIONS OF SOLAR CONVECTION
Lawson, Nicolas; Strugarek, Antoine; Charbonneau, Paul, E-mail: nicolas.laws@gmail.ca, E-mail: strugarek@astro.umontreal.ca, E-mail: paulchar@astro.umontreal.ca [Département de Physique, Université de Montréal, C.P. 6128 Succ. Centre-ville, Montréal, Qc H3C 3J7 (Canada)
2015-11-10
We investigate the possible development of magnetohydrodynamical instabilities in the EULAG-MHD “millennium simulation” of Passos and Charbonneau. This simulation sustains a large-scale magnetic cycle characterized by solar-like polarity reversals taking place on a regular multidecadal cadence, and in which zonally oriented bands of strong magnetic fields accumulate below the convective layers, in response to turbulent pumping from above in successive magnetic half-cycles. Key aspects of this simulation include low numerical dissipation and a strongly sub-adiabatic fluid layer underlying the convectively unstable layers corresponding to the modeled solar convection zone. These properties are conducive to the growth and development of two-dimensional instabilities that are otherwise suppressed by stronger dissipation. We find evidence for the action of a non-axisymmetric magnetoshear instability operating in the upper portions of the stably stratified fluid layers. We also investigate the possibility that the Tayler instability may be contributing to the destabilization of the large-scale axisymmetric magnetic component at high latitudes. On the basis of our analyses, we propose a global dynamo scenario whereby the magnetic cycle is driven primarily by turbulent dynamo action in the convecting layers, but MHD instabilities accelerate the dissipation of the magnetic field pumped down into the overshoot and stable layers, thus perhaps significantly influencing the magnetic cycle period. Support for this scenario is found in the distinct global dynamo behaviors observed in an otherwise identical EULAG-MHD simulations, using a different degree of sub-adiabaticity in the stable fluid layers underlying the convection zone.
An MHD Code for the Study of Magnetic Structures in the Solar Wind
Allred, J. C.; MacNeice, P. J.
2015-01-01
We have developed a 2.5D MHD code designed to study how the solar wind influences the evolution of transient events in the solar corona and inner heliosphere. The code includes thermal conduction, coronal heating and radiative cooling. Thermal conduction is assumed to be magnetic field-aligned in the inner corona and transitions to a collisionless formulation in the outer corona. We have developed a stable method to handle field-aligned conduction around magnetic null points. The inner boundary is placed in the upper transition region, and the mass flux across the boundary is determined from 1D field-aligned characteristics and a 'radiative energy balance' condition. The 2.5D nature of this code makes it ideal for parameter studies not yet possible with 3D codes. We have made this code publicly available as a tool for the community. To this end we have developed a graphical interface to aid in the selection of appropriate options and a graphical interface that can process and visualize the data produced by the simulation. As an example, we show a simulation of a dipole field stretched into a helmet streamer by the solar wind. Plasmoids periodically erupt from the streamer, and we perform a parameter study of how the frequency and location of these eruptions changed in response to different levels of coronal heating. As a further example, we show the solar wind stretching a compact multi-polar flux system. This flux system will be used to study breakout coronal mass ejections in the presence of the solar wind.
FARGO3D: A NEW GPU-ORIENTED MHD CODE
Benitez-Llambay, Pablo [Instituto de Astronomía Teórica y Experimental, Observatorio Astronónomico, Universidad Nacional de Córdoba. Laprida 854, X5000BGR, Córdoba (Argentina); Masset, Frédéric S., E-mail: pbllambay@oac.unc.edu.ar, E-mail: masset@icf.unam.mx [Instituto de Ciencias Físicas, Universidad Nacional Autónoma de México (UNAM), Apdo. Postal 48-3,62251-Cuernavaca, Morelos (Mexico)
2016-03-15
We present the FARGO3D code, recently publicly released. It is a magnetohydrodynamics code developed with special emphasis on the physics of protoplanetary disks and planet–disk interactions, and parallelized with MPI. The hydrodynamics algorithms are based on finite-difference upwind, dimensionally split methods. The magnetohydrodynamics algorithms consist of the constrained transport method to preserve the divergence-free property of the magnetic field to machine accuracy, coupled to a method of characteristics for the evaluation of electromotive forces and Lorentz forces. Orbital advection is implemented, and an N-body solver is included to simulate planets or stars interacting with the gas. We present our implementation in detail and present a number of widely known tests for comparison purposes. One strength of FARGO3D is that it can run on either graphical processing units (GPUs) or central processing units (CPUs), achieving large speed-up with respect to CPU cores. We describe our implementation choices, which allow a user with no prior knowledge of GPU programming to develop new routines for CPUs, and have them translated automatically for GPUs.
Gas Core Reactor Numerical Simulation Using a Coupled MHD-MCNP Model
Kazeminezhad, F.; Anghaie, S.
2008-01-01
Analysis is provided in this report of using two head-on magnetohydrodynamic (MHD) shocks to achieve supercritical nuclear fission in an axially elongated cylinder filled with UF4 gas as an energy source for deep space missions. The motivation for each aspect of the design is explained and supported by theory and numerical simulations. A subsequent report will provide detail on relevant experimental work to validate the concept. Here the focus is on the theory of and simulations for the proposed gas core reactor conceptual design from the onset of shock generations to the supercritical state achieved when the shocks collide. The MHD model is coupled to a standard nuclear code (MCNP) to observe the neutron flux and fission power attributed to the supercritical state brought about by the shock collisions. Throughout the modeling, realistic parameters are used for the initial ambient gaseous state and currents to ensure a resulting supercritical state upon shock collisions.
A New MHD Code with Adaptive Mesh Refinement and Parallelization for Astrophysics
Jiang, R L; Chen, P F
2012-01-01
A new code, named MAP, is written in Fortran language for magnetohydrodynamics (MHD) calculation with the adaptive mesh refinement (AMR) and Message Passing Interface (MPI) parallelization. There are several optional numerical schemes for computing the MHD part, namely, modified Mac Cormack Scheme (MMC), Lax-Friedrichs scheme (LF) and weighted essentially non-oscillatory (WENO) scheme. All of them are second order, two-step, component-wise schemes for hyperbolic conservative equations. The total variation diminishing (TVD) limiters and approximate Riemann solvers are also equipped. A high resolution can be achieved by the hierarchical block-structured AMR mesh. We use the extended generalized Lagrange multiplier (EGLM) MHD equations to reduce the non-divergence free error produced by the scheme in the magnetic induction equation. The numerical algorithms for the non-ideal terms, e.g., the resistivity and the thermal conduction, are also equipped in the MAP code. The details of the AMR and MPI algorithms are d...
MHD (Magnetohydrodynamic) Simulation of a Comet Magnetosphere.
1984-04-12
University Code 2628 (20 copies) New York, New York 10027 DTIC (2 copies) ATTN: R. Taussig R.A. Cross University of Alaska Geophysical Institute...Technology Croup Temerin, Michael Space Science Dept. Space Science Lab. Building 1-1, Room 1170 University of California One Space Park Berkeley...Minneapolis, MN 55455 Schulz, Michael Aerospace Corp. A6/2451, P.O. lox 92957 Los Angeles, California 90009 Shavhan, Stanley Dept. of Physics
Newtonian CAFE: a new ideal MHD code to study the solar atmosphere
González-Avilés, J. J.; Cruz-Osorio, A.; Lora-Clavijo, F. D.; Guzmán, F. S.
2015-12-01
We present a new code designed to solve the equations of classical ideal magnetohydrodynamics (MHD) in three dimensions, submitted to a constant gravitational field. The purpose of the code centres on the analysis of solar phenomena within the photosphere-corona region. We present 1D and 2D standard tests to demonstrate the quality of the numerical results obtained with our code. As solar tests we present the transverse oscillations of Alfvénic pulses in coronal loops using a 2.5D model, and as 3D tests we present the propagation of impulsively generated MHD-gravity waves and vortices in the solar atmosphere. The code is based on high-resolution shock-capturing methods, uses the Harten-Lax-van Leer-Einfeldt (HLLE) flux formula combined with Minmod, MC, and WENO5 reconstructors. The divergence free magnetic field constraint is controlled using the Flux Constrained Transport method.
Newtonian CAFE: a new ideal MHD code to study the solar atmosphere
Gonzalez-Aviles, J J; Lora-Clavijo, F D; Guzman, F S
2015-01-01
We present a new code designed to solve the equations of classical ideal magneto-hydrodynamics (MHD) in three dimensions, submitted to a constant gravitational field. The purpose of the code centers on the analysis of solar phenomena within the photosphere-corona region. We present 1D and 2D standard tests to demonstrate the quality of the numerical results obtained with our code. As solar tests we present the transverse oscillations of Alfvenic pulses in coronal loops using a 2.5D model, and as 3D tests we present the propagation of impulsively generated MHD-gravity waves and vortices in the solar atmosphere. The code is based on high-resolution shock-capturing methods, uses the HLLE flux formula combined with Minmod, MC and WENO5 reconstructors. The divergence free magnetic field constraint is controlled using the Flux Constrained Transport method.
Simulations of MHD flows with moving interfaces
Gerbeau, J F; Le Bris, C
2003-01-01
We report on the numerical simulation of a two-fluid magnetohydrodynamics problem arising in the industrial production of aluminium. The motion of the two non-miscible fluids is modeled through the incompressible Navier-Stokes equations coupled with the Maxwell equations. Stabilized finite elements techniques and an arbitrary Lagrangian-Eulerian formulation (for the motion of the interface separating the two fluids) are used in the numerical simulation. With a view to justifying our strategy, details on the numerical analysis of the problem, with a special emphasis on conservation and stability properties and on the surface tension discretization, as well as results on tests cases are provided. Examples of numerical simulations of the industrial case are eventually presented.
Comparisons of Cosmological MHD Galaxy Cluster Simulations to Radio Observations
Xu, Hao; Murgia, Matteo; Li, Hui; Collins, David C; Norman, Michael L; Cen, Renyue; Feretti, Luigina; Giovannini, Gabriele
2012-01-01
Radio observations of galaxy clusters show that there are $\\mu$G magnetic fields permeating the intra-cluster medium (ICM), but it is hard to accurately constrain the strength and structure of the magnetic fields without the help of advanced computer simulations. We present qualitative comparisons of synthetic VLA observations of simulated galaxy clusters to radio observations of Faraday Rotation Measure (RM) and radio halos. The cluster formation is modeled using adaptive mesh refinement (AMR) magneto-hydrodynamic (MHD) simulations with the assumption that the initial magnetic fields are injected into the ICM by active galactic nuclei (AGNs) at high redshift. In addition to simulated clusters in Xu et al. (2010, 2011), we present a new simulation with magnetic field injections from multiple AGNs. We find that the cluster with multiple injection sources is magnetized to a similar level as in previous simulations with a single AGN. The RM profiles from simulated clusters, both $|RM|$ and the dispersion of RM (...
A numerical code for a three-dimensional magnetospheric MHD equilibrium model
Voigt, G.-H.
1992-01-01
Two dimensional and three dimensional MHD equilibrium models were begun for Earth's magnetosphere. The original proposal was motivated by realizing that global, purely data based models of Earth's magnetosphere are inadequate for studying the underlying plasma physical principles according to which the magnetosphere evolves on the quasi-static convection time scale. Complex numerical grid generation schemes were established for a 3-D Poisson solver, and a robust Grad-Shafranov solver was coded for high beta MHD equilibria. Thus, the effects were calculated of both the magnetopause geometry and boundary conditions on the magnetotail current distribution.
FTE Dependence on IMF Orientation and Presence of Hall Physics in Global MHD Simulations
Maynard, K. M.; Germaschewski, K.; Lin, L.; Raeder, J.
2013-12-01
Flux Transfer Events (FTEs) are poleward traveling flux ropes that form in the dayside magnetopause and represent significant coupling of the solar wind to the magnetosphere during times of southward IMF. In the 35 years since their discovery, FTEs have been extensively observed and modeled; however, there is still no consensus on their generation mechanism. Previous modeling efforts have shown that FTE occurrence and size depend on the resistivity model that is used in simulations and the structure of X-lines in the magnetopause. We use Hall OpenGGCM, a global Hall-MHD code, to study the formation and propagation of FTEs in the dayside magnetopause using synthetic solar wind conditions. We examine large scale FTE structure and nearby magnetic separators for a range of IMF clock angles and dipole tilts. In addition, we investigate how FTE formation and recurrence rate depends on the presence of the Hall term in the generalized Ohm's law compared with resistive MHD.
One year in the Earth's magnetosphere: A global MHD simulation and spacecraft measurements
Facsko, G; Zivkovic, T; Palin, L; Kallio, E; Agren, K; Opgenoorth, H; Tanskanen, E I; Milan, S E
2016-01-01
The response of the Earth's magnetosphere to changing solar wind conditions are studied with a 3D Magnetohydrodynamic (MHD) model. One full year (155 Cluster orbits) of the Earth's magnetosphere is simulated using Grand Unified Magnetosphere Ionosphere Coupling simulation (GUMICS-4) magnetohydrodynamic code. Real solar wind measurements are given to the code as input to create the longest lasting global magnetohydrodynamics simulation to date. The applicability of the results of the simulation depends critically on the input parameters used in the model. Therefore, the validity and the variance of the OMNIWeb data is first investigated thoroughly using Cluster measurement close to the bow shock. The OMNIWeb and the Cluster data were found to correlate very well before the bow shock. The solar wind magnetic field and plasma parameters are not changed significantly from the $L_1$ Lagrange point to the foreshock, therefore the OMNIWeb data is appropriate input to the GUMICS-4. The Cluster SC3 footprints are dete...
Hayek, W; Carlsson, M; Trampedach, R; Collet, R; Gudiksen, B V; Hansteen, V H; Leenaarts, J
2010-01-01
We present the implementation of a radiative transfer solver with coherent scattering in the new BIFROST code for radiative magneto-hydrodynamical (MHD) simulations of stellar surface convection. The code is fully parallelized using MPI domain decomposition, which allows for large grid sizes and improved resolution of hydrodynamical structures. We apply the code to simulate the surface granulation in a solar-type star, ignoring magnetic fields, and investigate the importance of coherent scattering for the atmospheric structure. A scattering term is added to the radiative transfer equation, requiring an iterative computation of the radiation field. We use a short-characteristics-based Gauss-Seidel acceleration scheme to compute radiative flux divergences for the energy equation. The effects of coherent scattering are tested by comparing the temperature stratification of three 3D time-dependent hydrodynamical atmosphere models of a solar-type star: without scattering, with continuum scattering only, and with bo...
Stabilization of the SIESTA MHD Equilibrium Code Using Rapid Cholesky Factorization
Hirshman, S. P.; D'Azevedo, E. A.; Seal, S. K.
2016-10-01
The SIESTA MHD equilibrium code solves the discretized nonlinear MHD force F ≡ J X B - ∇p for a 3D plasma which may contain islands and stochastic regions. At each nonlinear evolution step, it solves a set of linearized MHD equations which can be written r ≡ Ax - b = 0, where A is the linearized MHD Hessian matrix. When the solution norm | x| is small enough, the nonlinear force norm will be close to the linearized force norm | r| 0 obtained using preconditioned GMRES. In many cases, this procedure works well and leads to a vanishing nonlinear residual (equilibrium) after several iterations in SIESTA. In some cases, however, | x|>1 results and the SIESTA code has to be restarted to obtain nonlinear convergence. In order to make SIESTA more robust and avoid such restarts, we have implemented a new rapid QR factorization of the Hessian which allows us to rapidly and accurately solve the least-squares problem AT r = 0, subject to the condition | x|QR method is based on a pairwise row factorization of the tri-diagonal Hessian. It provides a complete Cholesky factorization while preserving the memory allocation of A. This work was supported by the U.S. D.O.E. contract DE-AC05-00OR22725.
PROPERTIES OF UMBRAL DOTS AS MEASURED FROM THE NEW SOLAR TELESCOPE DATA AND MHD SIMULATIONS
Kilcik, A.; Yurchyshyn, V. B.; Abramenko, V.; Goode, P. R.; Cao, W. [Big Bear Solar Observatory, Big Bear City, CA 92314 (United States); Rempel, M. [High Altitude Observatory, NCAR, Boulder, CO 80307-3000 (United States); Kitai, R.; Watanabe, H. [Kwasan and Hida Observatories, Kyoto University, Kyoto 607-8417 (Japan)
2012-02-01
We studied bright umbral dots (UDs) detected in a moderate size sunspot and compared their statistical properties to recent MHD models. The study is based on high-resolution data recorded by the New Solar Telescope at the Big Bear Solar Observatory and three-dimensional (3D) MHD simulations of sunspots. Observed UDs, living longer than 150 s, were detected and tracked in a 46 minute long data set, using an automatic detection code. A total of 1553 (620) UDs were detected in the photospheric (low chromospheric) data. Our main findings are (1) none of the analyzed UDs is precisely circular, (2) the diameter-intensity relationship only holds in bright umbral areas, and (3) UD velocities are inversely related to their lifetime. While nearly all photospheric UDs can be identified in the low chromospheric images, some small closely spaced UDs appear in the low chromosphere as a single cluster. Slow-moving and long-living UDs seem to exist in both the low chromosphere and photosphere, while fast-moving and short-living UDs are mainly detected in the photospheric images. Comparison to the 3D MHD simulations showed that both types of UDs display, on average, very similar statistical characteristics. However, (1) the average number of observed UDs per unit area is smaller than that of the model UDs, and (2) on average, the diameter of model UDs is slightly larger than that of observed ones.
3D MHD simulation of polarized emission in SN 1006
Schneiter, E M; Reynoso, E M; Esquivel, A; De Colle, F
2015-01-01
We use three dimensional magnetohydrodynamic (MHD) simulations to model the supernova remnant SN 1006. From our numerical results, we have carried out a polarization study, obtaining synthetic maps of the polarized intensity, the Stokes parameter $Q$, and the polar-referenced angle, which can be compared with observational results. Synthetic maps were computed considering two possible particle acceleration mechanisms: quasi-parallel and quasi-perpendicular. The comparison of synthetic maps of the Stokes parameter $Q$ maps with observations proves to be a valuable tool to discern unambiguously which mechanism is taking place in the remnant of SN 1006, giving strong support to the quasi-parallel model.
Progress on accelerated calculation of 3D MHD equilibrium with the PIES code
Raburn, Daniel; Reiman, Allan; Monticello, Donald
2016-10-01
Continuing progress has been made in accelerating the 3D MHD equilibrium code, PIES, using an external numerical wrapper. The PIES code (Princeton Iterative Equilibrium Solver) is capable of calculating 3D MHD equilibria with islands. The numerical wrapper has been demonstrated to greatly improve the rate of convergence in numerous cases corresponding to equilibria in the TFTR device where magnetic islands are present; the numerical wrapper makes use of a Jacobian-free Newton-Krylov solver along with adaptive preconditioning and a sophisticated subspace-restricted Levenberg backtracking algorithm. The wrapper has recently been improved by automation which combines the preexisting backtracking algorithm with insights gained from the stability of the Picard algorithm traditionally used with PIES. Improved progress logging and stopping criteria have also been incorporated in to the numerical wrapper.
WhiskyMHD: Numerical Code for General Relativistic Magnetohydrodynamics
Baiotti, Luca; Giacomazzo, Bruno; Hawke, Ian; et al.
2010-10-01
Whisky is a code to evolve the equations of general relativistic hydrodynamics (GRHD) and magnetohydrodynamics (GRMHD) in 3D Cartesian coordinates on a curved dynamical background. It was originally developed by and for members of the EU Network on Sources of Gravitational Radiation and is based on the Cactus Computational Toolkit. Whisky can also implement adaptive mesh refinement (AMR) if compiled together with Carpet. Whisky has grown from earlier codes such as GR3D and GRAstro_Hydro, but has been rewritten to take advantage of some of the latest research performed here in the EU. The motivation behind Whisky is to compute gravitational radiation waveforms for systems that involve matter. Examples would include the merger of a binary system containing a neutron star, which are expected to be reasonably common in the universe and expected to produce substantial amounts of radiation. Other possible sources are given in the projects list.
On the characterization of magnetic reconnection in global MHD simulations
T. V. Laitinen
2006-11-01
Full Text Available The conventional definition of reconnection rate as the electric field parallel to an x-line is problematic in global MHD simulations for several reasons: the x-line itself may be hard to find in a non-trivial geometry such as at the magnetopause, and the lack of realistic resistivity modelling leaves us without reliable non-convective electric field. In this article we describe reconnection characterization methods that avoid those problems and are practical to apply in global MHD simulations. We propose that the reconnection separator line can be identified as the region where magnetic field lines of different topological properties meet, rather than by local considerations. The global convection associated with reconnection is then quantified by calculating the transfer of mass, energy or magnetic field across the boundary of closed and open field line regions. The extent of the diffusion region is determined from the destruction of electromagnetic energy, given by the divergence of the Poynting vector. Integrals of this energy conversion provide a way to estimate the total reconnection efficiency.
MHD Simulations of Core Collapse Supernovae with Cosmos++
Akiyama, Shizuka
2010-01-01
We performed 2D, axisymmetric, MHD simulations with Cosmos++ in order to examine the growth of the magnetorotational instability (MRI) in core--collapse supernovae. We have initialized a non--rotating 15 solar mass progenitor, infused with differential rotation and poloidal magnetic fields. The collapse of the iron core is simulated with the Shen EOS, and the parametric Ye and entropy evolution. The wavelength of the unstable mode in the post--collapse environment is expected to be only ~ 200 m. In order to achieve the fine spatial resolution requirement, we employed remapping technique after the iron core has collapsed and bounced. The MRI unstable region appears near the equator and angular momentum and entropy are transported outward. Higher resolution remap run display more vigorous overturns and stronger transport of angular momentum and entropy. Our results are in agreement with the earlier work by Akiyama et al. (2003) and Obergaulinger et al. (2009).
Blanket-relevant liquid metal MHD channel flows: Data base and optimization simulation development
Evtushenko, I.A.; Kirillov, I.R.; Sidorenkov, S.I. [D.V. Efremov Inst. of Electrophysical Apparatus, St Petersburg (Russian Federation)
1995-12-31
The problems of generalization and integration of test, theoretical and design data relevant to liquid metal (LM) blanket are discussed in present work. First results on MHD data base and LM blanket optimization codes are presented.
Final Report: "Large-Eddy Simulation of Anisotropic MHD Turbulence"
Zikanov, Oleg
2008-06-23
To acquire better understanding of turbulence in flows of liquid metals and other electrically conducting fluids in the presence of steady magnetic fields and to develop an accurate and physically adequate LES (large-eddy simulation) model for such flows. The scientific objectives formulated in the project proposal have been fully completed. Several new directions were initiated and advanced in the course of work. Particular achievements include a detailed study of transformation of turbulence caused by the imposed magnetic field, development of an LES model that accurately reproduces this transformation, and solution of several fundamental questions of the interaction between the magnetic field and fluid flows. Eight papers have been published in respected peer-reviewed journals, with two more papers currently undergoing review, and one in preparation for submission. A post-doctoral researcher and a graduate student have been trained in the areas of MHD, turbulence research, and computational methods. Close collaboration ties have been established with the MHD research centers in Germany and Belgium.
Sunspot Modeling: From Simplified Models to Radiative MHD Simulations
Rolf Schlichenmaier
2011-09-01
Full Text Available We review our current understanding of sunspots from the scales of their fine structure to their large scale (global structure including the processes of their formation and decay. Recently, sunspot models have undergone a dramatic change. In the past, several aspects of sunspot structure have been addressed by static MHD models with parametrized energy transport. Models of sunspot fine structure have been relying heavily on strong assumptions about flow and field geometry (e.g., flux-tubes, "gaps", convective rolls, which were motivated in part by the observed filamentary structure of penumbrae or the necessity of explaining the substantial energy transport required to maintain the penumbral brightness. However, none of these models could self-consistently explain all aspects of penumbral structure (energy transport, filamentation, Evershed flow. In recent years, 3D radiative MHD simulations have been advanced dramatically to the point at which models of complete sunspots with sufficient resolution to capture sunspot fine structure are feasible. Here overturning convection is the central element responsible for energy transport, filamentation leading to fine-structure and the driving of strong outflows. On the larger scale these models are also in the progress of addressing the subsurface structure of sunspots as well as sunspot formation. With this shift in modeling capabilities and the recent advances in high resolution observations, the future research will be guided by comparing observation and theory.
Alfvén ionization in an MHD-gas interactions code
Wilson, A. D.; Diver, D. A.
2016-07-01
A numerical model of partially ionized plasmas is developed in order to capture their evolving ionization fractions as a result of Alfvén ionization (AI). The mechanism of, and the parameter regime necessary for, AI is discussed and an expression for the AI rate based on fluid parameters, from a gas-MHD model, is derived. This AI term is added to an existing MHD-gas interactions' code, and the result is a linear, 2D, two-fluid model that includes momentum transfer between charged and neutral species as well as an ionization rate that depends on the velocity fields of both fluids. The dynamics of waves propagating through such a partially ionized plasma are investigated, and it is found that AI has a significant influence on the fluid dynamics as well as both the local and global ionization fraction.
Kitiashvili, I N; Goode, P R; Kosovichev, A G; Lele, S K; Mansour, N N; Wray, A A; Yurchyshyn, V B
2012-01-01
Turbulent properties of the quiet Sun represent the basic state of surface conditions, and a background for various processes of solar activity. Therefore understanding of properties and dynamics of this `basic' state is important for investigation of more complex phenomena, formation and development of observed phenomena in the photosphere and atmosphere. For characterization of the turbulent properties we compare kinetic energy spectra on granular and sub-granular scales obtained from infrared TiO observations with the New Solar Telescope (Big Bear Solar Observatory) and from 3D radiative MHD numerical simulations ('SolarBox' code). We find that the numerical simulations require a high spatial resolution with 10 - 25 km grid-step in order to reproduce the inertial (Kolmogorov) turbulence range. The observational data require an averaging procedure to remove noise and potential instrumental artifacts. The resulting kinetic energy spectra show a good agreement between the simulations and observations, opening...
Formation and collimation of relativistic MHD jets - simulations and radio maps
Fendt, Christian; Sheikhnezami, Somayeh
2013-01-01
We present results of magnetohydrodynamic (MHD) simulations of jet formation and propagation, discussing a variety of astrophysical setups. In the first approach we consider simulations of relativistic MHD jet formation, considering jets launched from the surface of a Keplerian disk, demonstrating numerically - for the first time - the self-collimating ability of relativistic MHD jets. We obtain Lorentz factors up to about 10 while acquiring a high degree of collimation of about 1 degree. We then present synchrotron maps calculated from the intrinsic jet structure derived from the MHD jet formation simulation. We finally present (non-relativistic) MHD simulations of jet lauching, treating the transition between accretion and ejection. These setups include a physical magnetic diffusivity which is essential for loading the accretion material onto the outflow. We find relatively high mass fluxes in the outflow, of the order of 20-40 % of the accretion rate.
A discontinuous Galerkin method for solving the fluid and MHD equations in astrophysical simulations
Mocz, Philip; Sijacki, Debora; Hernquist, Lars
2013-01-01
A discontinuous Galerkin (DG) method suitable for large-scale astrophysical simulations on Cartesian meshes as well as arbitrary static and moving Voronoi meshes is presented. Most major astrophysical fluid dynamics codes use a finite volume (FV) approach. We demonstrate that the DG technique offers distinct advantages over FV formulations on both static and moving meshes. The DG method is also easily generalized to higher than second-order accuracy without requiring the use of extended stencils to estimate derivatives (thereby making the scheme highly parallelizable). We implement the technique in the AREPO code for solving the fluid and the magnetohydrodynamic (MHD) equations. By examining various test problems, we show that our new formulation provides improved accuracy over FV approaches of the same order, and reduces post-shock oscillations and artificial diffusion of angular momentum. In addition, the DG method makes it possible to represent magnetic fields in a locally divergence-free way, improving th...
MHD Remote Numerical Simulations: Evolution of Coronal Mass Ejections
Hernandez-Cervantes, L; Gonzalez-Ponce, A R
2008-01-01
Coronal mass ejections (CMEs) are solar eruptions into interplanetary space of as much as a few billion tons of plasma, with embedded magnetic fields from the Sun's corona. These perturbations play a very important role in solar--terrestrial relations, in particular in the spaceweather. In this work we present some preliminary results of the software development at the Universidad Nacional Autonoma de Mexico to perform Remote MHD Numerical Simulations. This is done to study the evolution of the CMEs in the interplanetary medium through a Web-based interface and the results are store into a database. The new astrophysical computational tool is called the Mexican Virtual Solar Observatory (MVSO) and is aimed to create theoretical models that may be helpful in the interpretation of observational solar data.
MHD simulations with resistive wall and magnetic separatrix
Strauss, H. R.; Pletzer, A.; Park, W.; Jardin, S.; Breslau, J.; Sugiyama, L.
2004-12-01
A number of problems in resistive MHD magnetic fusion simulations describe plasmas with three regions: the core, the halo region, and the resistive boundary. Treating these problems requires maintenance of an adequate resistivity contrast between the core and halo. This can be helped by the presence of a magnetic separatrix, which in any case is required for reasons of realistic modeling. An appropriate mesh generation capability is also needed to include the halo region when a separatrix is present. Finally a resistive wall boundary condition is required, to allow both two dimensional and three dimensional magnetic perturbations to penetrate the wall. Preliminary work is presented on halo current simulations in ITER. The first step is the study of VDE (vertical displacement event) instabilities. The growth rate is consistent with scaling inversely proportional to the resistive wall penetration time. The simulations have resistivity proportional to the -3/2 power of the temperature. Simulations have been done with resistivity contrast between the plasma core and wall of 1000 times, to model the vacuum region between the core and resistive shell. Some 3D simulations are shown of disruptions competing with VDEs. Toroidal peaking factors are up to about 3.
Proposal of a brand-new gyrokinetic algorithm for global MHD simulation
Naitou, Hiroshi; Kobayashi, Kenichi; Hashimoto, Hiroki; Andachi, Takehisa; Lee, Wei-Li; Tokuda, Shinji; Yagi, Masatoshi
2009-11-01
A new algorithm for the gyrokinetic PIC code is proposed. The basic equations are energy conserving and composed of (1) the gyrokinetic Vlasov (GKV) equation, (2) the Vortex equation, and (3) the generalized Ohm's law along the magnetic field. Equation (2) is used to advance electrostatic potential in time. Equation (3) is used to advance longitudinal component of vector potential in time as well as estimating longitudinal induced electric field to accelerate charged particles. The particle information is used to estimate pressure terms in equation (3). The idea was obtained in the process of reviewing the split-weight-scheme formalism. This algorithm was incorporated in the Gpic-MHD code. Preliminary results for the m=1/n=1 internal kink mode simulation in the cylindrical geometry indicate good energy conservation, quite low noise due to particle discreteness, and applicability to larger spatial scale and higher beta regimes. The advantage of new Gpic-MHD is that the lower order moments of the GKV equation are estimated by the moment equation while the particle information is used to evaluate the second order moment.
Nonlinear excitation of low-n harmonics in reduced MHD simulations of edge-localized modes
Krebs, Isabel; Lackner, Karl; Guenter, Sibylle
2013-01-01
Nonlinear simulations of the early ELMphase based on a typical type-I ELMy ASDEX Upgrade discharge have been carried out using the reduced MHD code JOREK. The analysis is focused on the evolution of the toroidal Fourier spectrum. It is found that during the nonlinear evolution, linearly subdominant low-n Fourier components, in particular the n = 1, grow to energies comparable with linearly dominant harmonics. A simple model is developed, based on the idea that energy is transferred among the toroidal harmonics via second order nonlinear interaction. The simple model reproduces and explains very well the early nonlinear evolution of the toroidal spectrum in the JOREK simulations. Furthermore, it is shown for the n = 1 harmonic, that its spatial structure changes significantly during the transition from linear to nonlinearly driven growth. The rigidly growing structure of the linearly barely unstable n = 1 reaches far into the plasma core. In contrast, the nonlinearly driven n = 1 has a rigidly growing structur...
LFSC - Linac Feedback Simulation Code
Ivanov, Valentin; /Fermilab
2008-05-01
The computer program LFSC (
CosmosDG: An hp-adaptive Discontinuous Galerkin Code for Hyper-resolved Relativistic MHD
Anninos, Peter; Bryant, Colton; Fragile, P. Chris; Holgado, A. Miguel; Lau, Cheuk; Nemergut, Daniel
2017-08-01
We have extended Cosmos++, a multidimensional unstructured adaptive mesh code for solving the covariant Newtonian and general relativistic radiation magnetohydrodynamic (MHD) equations, to accommodate both discrete finite volume and arbitrarily high-order finite element structures. The new finite element implementation, called CosmosDG, is based on a discontinuous Galerkin (DG) formulation, using both entropy-based artificial viscosity and slope limiting procedures for the regularization of shocks. High-order multistage forward Euler and strong-stability preserving Runge-Kutta time integration options complement high-order spatial discretization. We have also added flexibility in the code infrastructure allowing for both adaptive mesh and adaptive basis order refinement to be performed separately or simultaneously in a local (cell-by-cell) manner. We discuss in this report the DG formulation and present tests demonstrating the robustness, accuracy, and convergence of our numerical methods applied to special and general relativistic MHD, although we note that an equivalent capability currently also exists in CosmosDG for Newtonian systems.
MHD Simulations of Magnetospheric Accretion, Ejection and Plasma-field Interaction
Romanova M. M.
2014-01-01
Full Text Available We review recent axisymmetric and three-dimensional (3D magnetohydrodynamic (MHD numerical simulations of magnetospheric accretion, plasma-field interaction and outflows from the disk-magnetosphere boundary.
Simulated annealing for three-dimensional low-beta reduced MHD equilibria in cylindrical geometry
Furukawa, M
2016-01-01
Simulated annealing (SA) is applied for three-dimensional (3D) equilibrium calculation of ideal, low-beta reduced MHD in cylindrical geometry. The SA is based on the theory of Hamiltonian mechanics. The dynamical equation of the original system, low-beta reduced MHD in this study, is modified so that the energy changes monotonically while preserving the Casimir invariants in the artificial dynamics. An equilibrium of the system is given by an extremum of the energy, therefore SA can be used as a method for calculating ideal MHD equilibrium. Previous studies demonstrated that the SA succeeds to lead to various MHD equilibria in two dimensional rectangular domain. In this paper, the theory is applied to 3D equilibrium of ideal, low-beta reduced MHD. An example of equilibrium with magnetic islands, obtained as a lower energy state, is shown. Several versions of the artificial dynamics are developed that can effect smoothing.
The MHD simulations of 3D magnetic reconnection near null point of magnetic configurations
Bulanov, S.V. [Institute of General Physics, Russian Academy of Sciences, Moscow (Russian Federation); Echkina, E.Yu; Inovenkov, I.N.; Pichushkin, V.V. [Moscow State University, Moscow (Russian Federation); Pegoraro, F. [Dipartimento di Fisica dell' Universit' a di Pisa and INFM (Italy)
2000-07-01
We investigate 3D plasma flow in the vicinities of critical points of magnetic configurations. The study is based on the analysis of exact self-similar solution of the MHD equations and 3D computer simulations. Both the analytical solution and 3D MHD simulations demonstrate appearance of singular distribution of the electric current density near the magnetic field separatrix surfaces of the form of the current and vortex sheets. (author)
Cheung, M. C.; Schüssler, M.; Moreno-Insertis, F.; Tarbell, T. D.
2007-12-01
With high angular resolution, high temporal cadence and a stable point spread function, the Solar Optical Telescope (SOT) onboard the Hinode satellite is the ideal instrument for the study of magnetic flux emergence and its manifestations on the solar surface. In this presentation, we focus on the development of ephemeral regions and small active regions. In many instances, SOT has been able to capture the entire emergence process from beginning to end: i.e. from the initial stages of flux appearance in granule interiors, through the intermediate stages of G-band bright point formation, and finally to the coalescence of small vertical flux elements to form pores. To investigate the physics of the flux emergence process, we performed 3D numerical MHD simulations with the MURaM code. The models are able to reproduce, and help us explain, various observational signatures of magnetic flux emergence.
Current systems of coronal loops in 3D MHD simulations
Warnecke, Jörn; Bingert, Sven; Peter, Hardi
2016-01-01
We study the magnetic field and current structure associated with a coronal loop. Through this we investigate to what extent the assumptions of a force-free magnetic field break down. We analyse a three-dimensional MHD model of the solar corona in an emerging active region with the focus on the structure of the forming coronal loops. The lower boundary of this simulation is taken from a model of an emerging active region. As a consequence of the emerging magnetic flux a coronal loop formes self-consistently. We investigate the current density along magnetic field lines inside (and outside) this loop and study the magnetic and plasma properties in and around this loop. The loop is defined as the bundle of field lines that coincides with enhanced emission in extreme UV. We find that the total current along the emerging loop changes its sign from being antiparallel to parallel to the magnetic field. Around the loop the currents form a complex non-force-free helical structure. This is directly related to a bipola...
Relativistic MHD Simulations of Poynting Flux-Driven Jets
Guan, Xiaoyue; Li, Shengtai
2013-01-01
Relativistic, magnetized jets are observed to propagate to very large distances in many Active Galactic Nuclei (AGN). We use 3D relativistic MHD (RMHD) simulations to study the propagation of Poynting flux-driven jets in AGN. These jets are assumed already being launched from the vicinity ($\\sim 10^3$ gravitational radii) of supermassive black holes. Jet injections are characterized by a model described in Li et al. (2006) and we follow the propagation of these jets to ~ parsec scales. We find that these current-carrying jets are always collimated and mildly relativistic. When $\\alpha$, the ratio of toroidal-to-poloidal magnetic flux injection, is large the jet is subject to non-axisymmetric current-driven instabilities (CDI) which lead to substantial dissipation and reduced jet speed. However, even with the presence of instabilities, the jet is not disrupted and will continue to propagate to large distances. We suggest that the relatively weak impact by the instability is due to the nature of the instability...
Global 3D MHD Simulations of Waves in Accretion Discs
Romanova M.M.
2013-04-01
Full Text Available We discuss results of the first global 3D MHD simulations of warp and density waves in accretion disks excited by a rotating star with a misaligned dipole magnetic field. A wide range of cases are considered. We find for example that if the star’s magnetosphere corotates approximately with the inner disk, then a strong one-arm bending wave or warp forms. The warp corotates with the star and has a maximum amplitude (|zw|/r ~ 0.3 between the corotation radius and the radius of the vertical resonance. If the magnetosphere rotates more slowly than the inner disk, then a bending wave is excited at the disk-magnetosphere boundary, but it does not form a large-scale warp. In this case the angular rotation of the disk [Ω(r] has a maximum as a function of r so that there is an inner region where dΩ/dr > 0. In this region we observe radially trapped density waves in approximate agreement with the theoretical prediction of a Rossby wave instability in this region.
2012-02-28
Engineering, 2010. 8 Roth, T., “ Modeling and Numerical Simulations of Pulse Detonation Engines with MHD Thrust Augmentation”, M.S. thesis, Department of...throat, at time 2.3ms. Results are shown for the PDE (blow-down model ) with and without MHD generation in the region between 0.4 and 0.8m from the...down model ) for different values of the exit- to-throat area ratio and for different altitudes, without MHD generation and without the presence of the
HADES, A Radiographic Simulation Code
Aufderheide, M.B.; Slone, D.M.; Schach von Wittenau, A.E.
2000-08-18
We describe features of the HADES radiographic simulation code. We begin with a discussion of why it is useful to simulate transmission radiography. The capabilities of HADES are described, followed by an application of HADES to a dynamic experiment recently performed at the Los Alamos Neutron Science Center. We describe quantitative comparisons between experimental data and HADES simulations using a copper step wedge. We conclude with a short discussion of future work planned for HADES.
Simulation of three-dimensional nonideal MHD flow at high magnetic Reynolds number
无
2010-01-01
A conservative TVD scheme is adopted to solve the equations governing the three-dimensional flow of a nonideal compressible conducting fluid in a magnetic field.The eight-wave equations for magnetohydrodynamics(MHD) are proved to be a non-strict hyperbolic system,therefore it is difficult to develop its eigenstructure.Powell developed a new set of equations which cannot be numerically simulated by conservative TVD scheme directly due to its non-conservative form.A conservative TVD scheme augmented with a new set of eigenvectors is proposed in the paper.To validate this scheme,1-D MHD shock tube,unsteady MHD Rayleigh problem and steady MHD Hartmann problem for different flow conditions are simulated.The simulated results are in good agreement with the existing analytical results.So this scheme can be used to effectively simulate high-conductivity fluids such as cosmic MHD problem and hypersonic MHD flow over a blunt body,etc.
潘卫; 陈燎原; 董家齐; 沈勇; 张锦华
2009-01-01
将理想全二维磁流体(MHD)稳定性数值代码GATO成功移植到HL-2A高性能计算系统,并用其模拟研究了HL-2A装置一次典型弹丸注入实验的等离子体的理想MHD稳定性.利用HL-2A装置第4050次放电的实验数据,应用EFIT代码重建了几个时间片的平衡位形,然后应用GATO代码对每个平衡位形的MHD稳定性进行了计算.通过对结果进行分析比较得出初步结论,由于弹丸注入而造成的反剪切位形的致稳作用,可以提高等离子体的约束性能.
3D MHD Simulations of Laser Plasma Guiding in Curved Magnetic Field
Roupassov, S.; Rankin, R.; Tsui, Y.; Capjack, C.; Fedosejevs, R.
1999-11-01
The guiding and confinement of laser produced plasma in a curved magnetic field has been investigated numerically. These studies were motivated by experiments on pulsed laser deposition of diamond-like films [1] in which a 1kG magnetic field in a curved solenoid geometry was utilized to steer a carbon plasma around a curved trajectory and thus to separate it from unwanted macroparticles produced by the laser ablation. The purpose of the modeling was to characterize the plasma dynamics during the propagation through the magnetic guide field and to investigate the effect of different magnetic field configurations. A 3D curvilinear ADI code developed on the basis of an existing Cartesian code [2] was employed to simulate the underlying resistive one-fluid MHD model. Issues such as large regions of low background density and nonreflective boundary conditions were addressed. Results of the simulations in a curved guide field will be presented and compared to experimental results. [1] Y.Y. Tsui, D. Vick and R. Fedosejevs, Appl. Phys. Lett. 70 (15), pp. 1953-57, 1997. [2] R. Rankin, and I. Voronkov, in "High Performance Computing Systems and Applications", pp. 59-69, Kluwer AP, 1998.
Global simulations of protoplanetary disks with net magnetic flux. I. Non-ideal MHD case
Béthune, William; Lesur, Geoffroy; Ferreira, Jonathan
2017-04-01
Context. The planet-forming region of protoplanetary disks is cold, dense, and therefore weakly ionized. For this reason, magnetohydrodynamic (MHD) turbulence is thought to be mostly absent, and another mechanism has to be found to explain gas accretion. It has been proposed that magnetized winds, launched from the ionized disk surface, could drive accretion in the presence of a large-scale magnetic field. Aims: The efficiency and the impact of these surface winds on the disk structure is still highly uncertain. We present the first global simulations of a weakly ionized disk that exhibits large-scale magnetized winds. We also study the impact of self-organization, which was previously demonstrated only in non-stratified models. Methods: We perform numerical simulations of stratified disks with the PLUTO code. We compute the ionization fraction dynamically, and account for all three non-ideal MHD effects: ohmic and ambipolar diffusions, and the Hall drift. Simplified heating and cooling due to non-thermal radiation is also taken into account in the disk atmosphere. Results: We find that disks can be accreting or not, depending on the configuration of the large-scale magnetic field. Magnetothermal winds, driven both by magnetic acceleration and heating of the atmosphere, are obtained in the accreting case. In some cases, these winds are asymmetric, ejecting predominantly on one side of the disk. The wind mass loss rate depends primarily on the average ratio of magnetic to thermal pressure in the disk midplane. The non-accreting case is characterized by a meridional circulation, with accretion layers at the disk surface and decretion in the midplane. Finally, we observe self-organization, resulting in axisymmetric rings of density and associated pressure "bumps". The underlying mechanism and its impact on observable structures are discussed.
Krause, M.; M. Camenzind
2001-01-01
In the present paper, we examine the convergence behavior and inter-code reliability of astrophysical jet simulations in axial symmetry. We consider both, pure hydrodynamic jets and jets with a dynamically significant magnetic field. The setups were chosen to match the setups of two other publications, and recomputed with the MHD code NIRVANA. We show that NIRVANA and the two other codes give comparable, but not identical results. We find that some global properties of a hydrodynamical jet si...
Simulation of three-dimensional nonideal MHD flow at low magnetic Reynolds number
LU HaoYu; LEE ChunHian
2009-01-01
A numerical procedure based on a five-wave model associated with non-ideal,low magnetic Reynolds number magnetohydrodynamic(MHD)flows was developed.It is composed of an entropy conditioned scheme for solving the non-homogeneous Navier-Stokes equations,in conjunction with an SOR method for solving the elliptic equation governing the electrical potential of flow field.To validate the developed procedure,two different test cases were used which included MHD Rayleigh problem and MHD Hartmann problem.The simulations were performed under the assumption of low magnetic Reynolds number.The simulated results were found to be in good agreement with the closed form analytical solutions deduced in the present study,showing that the present algorithm could simulate engineering MHD flow at low magnetic Reynolds number effectively.In the end,a flow field between a pair of segmented electrodes in a three dimensional MHD channel was simulated using the present algorithm with and without including Hall effects.Without the introduction of Hall effects,no distortion was observed in the current and potential lines.By taking the Hall effects into account,the potential lines distorted and clustered at the upstream and downstream edges of the cathode and anode,respectively.
Comparison of solar photospheric bright points between SUNRISE observations and MHD simulations
Riethmüller, T L; Berdyugina, S V; Schüssler, M; Pillet, V Mart\\'\\inez; Feller, A; Gandorfer, A; Hirzberger, J
2014-01-01
Bright points (BPs) in the solar photosphere are radiative signatures of magnetic elements described by slender flux tubes located in the darker intergranular lanes. They contribute to the ultraviolet (UV) flux variations over the solar cycle and hence may influence the Earth's climate. Here we combine high-resolution UV and spectro-polarimetric observations of BPs by the SUNRISE observatory with 3D radiation MHD simulations. Full spectral line syntheses are performed with the MHD data and a careful degradation is applied to take into account all relevant instrumental effects of the observations. It is demonstrated that the MHD simulations reproduce the measured distributions of intensity at multiple wavelengths, line-of-sight velocity, spectral line width, and polarization degree rather well. Furthermore, the properties of observed BPs are compared with synthetic ones. These match also relatively well, except that the observations display a tail of large and strongly polarized BPs not found in the simulation...
Cosmic-ray pitch-angle scattering in imbalanced MHD turbulence simulations
Weidl, Martin S; Teaca, Bogdan; Schlickeiser, Reinhard
2015-01-01
Pitch-angle scattering rates for cosmic-ray particles in magnetohydrodynamic (MHD) simulations with imbalanced turbulence are calculated for fully evolving electromagnetic turbulence. We compare with theoretical predictions derived from the quasilinear theory of cosmic-ray diffusion for an idealized slab spectrum and demonstrate how cross helicity affects the shape of the pitch-angle diffusion coefficient. Additional simulations in evolving magnetic fields or static field configurations provide evidence that the scattering anisotropy in imbalanced turbulence is not primarily due to coherence with propagating Alfven waves, but an effect of the spatial structure of electric fields in cross-helical MHD turbulence.
Integrated Physics Advances in Simulation of Wave Interactions with Extended MHD Phenomena
Batchelor, Donald B [ORNL; D' Azevedo, Eduardo [ORNL; Bateman, Glenn [Lehigh University, Bethlehem, PA; Bernholdt, David E [ORNL; Berry, Lee A [ORNL; Bonoli, P. [Massachusetts Institute of Technology (MIT); Bramley, R [Indiana University; Breslau, J. [Princeton Plasma Physics Laboratory (PPPL); Chance, M. [Princeton Plasma Physics Laboratory (PPPL); Chen, J. [Princeton Plasma Physics Laboratory (PPPL); Choi, M. [General Atomics; Elwasif, Wael R [ORNL; Fu, GuoYong [Princeton Plasma Physics Laboratory (PPPL); Harvey, R. W. [CompX, Del Mar, CA; Houlberg, Wayne A [ORNL; Jaeger, Erwin Frederick [ORNL; Jardin, S. C. [Princeton Plasma Physics Laboratory (PPPL); Keyes, David E [Columbia University; Klasky, Scott A [ORNL; Kruger, Scott [Tech-X Corporation; Ku, Long-Poe [Princeton Plasma Physics Laboratory (PPPL); McCune, Douglas [Princeton Plasma Physics Laboratory (PPPL); Schissel, D. [General Atomics; Schnack, D. [University of Wisconsin; Wright, J. C. [Massachusetts Institute of Technology (MIT)
2007-06-01
The broad scientific objectives of the SWIM (Simulation of Wave Interaction with MHD) project are: (A) To improve our understanding of interactions that both RF wave and particle sources have on extended-MHD phenomena, and to substantially improve our capability for predicting and optimizing the performance of burning plasmas in devices such as ITER: and (B) To develop an integrated computational system for treating multi-physics phenomena with the required flexibility and extensibility to serve as a prototype for the Fusion Simulation Project (FSP).
Integrated physics advances in simulation of wave interactions with extended MHD phenomena
Batchelor, D B [ORNL (United States); D' Azevedo, E [ORNL (United States); Bateman, G [Lehigh (United States)] (and others)
2007-07-15
The broad scientific objectives of the SWIM (Simulation of Wave Interaction with MHD) project are: (A) To improve our understanding of interactions that both RF wave and particle sources have on extended-MHD phenomena, and to substantially improve our capability for predicting and optimizing the performance of burning plasmas in devices such as ITER: and (B) To develop an integrated computational system for treating multi-physics phenomena with the required flexibility and extensibility to serve as a prototype for the Fusion Simulation Project (FSP)
Nakamura, Y.; Matsumoto, T.; Wakatani, M. [Kyoto Univ. (Japan). Plasma Physics Lab.; Galkin, S.A.; Drozdov, V.V.; Martynov, A.A.; Poshekhonov, Yu.Yu. [Keldysh Institute of Applied Mathematics, Moscow (Russian Federation); Ichiguchi, K. [National Institute for Fusion Science, Nagoya (Japan); Garcia, L. [Universidad Carlos III de Madrid (Spain); Carreras, B.A. [Oak Ridge National Lab., TN (United States)] [and others
1995-04-01
A particular configuration of the LHD stellarator with an unusually flat pressure profile has been chosen to be a test case for comparison of the MHD stability property predictions of different three-dimensional and averaged codes for the purpose of code comparison and validation. In particular, two relatively localized instabilities, the fastest growing modes with toroidal mode number n = 2 and n = 3 were studied using several different codes, with the good agreement that has been found providing justification for the use of any of them for equilibria of the type considered.
Attempts to Simulate Anisotropies of Solar Wind Fluctuations Using MHD with a Turning Magnetic Field
Ghosh, Sanjoy; Roberts, D. Aaron
2010-01-01
We examine a "two-component" model of the solar wind to see if any of the observed anisotropies of the fields can be explained in light of the need for various quantities, such as the magnetic minimum variance direction, to turn along with the Parker spiral. Previous results used a 3-D MHD spectral code to show that neither Q2D nor slab-wave components will turn their wave vectors in a turning Parker-like field, and that nonlinear interactions between the components are required to reproduce observations. In these new simulations we use higher resolution in both decaying and driven cases, and with and without a turning background field, to see what, if any, conditions lead to variance anisotropies similar to observations. We focus especially on the middle spectral range, and not the energy-containing scales, of the simulation for comparison with the solar wind. Preliminary results have shown that it is very difficult to produce the required variances with a turbulent cascade.
Spicule-like structures observed in 3D realistic MHD simulations
Martinez-Sykora, J; De Pontieu, B; Carlsson, M
2009-01-01
We analyze features that resemble type i spicules in two different 3D numerical simulations in which we include horizontal magnetic flux emergence in a computational domain spanning the upper layers of the convection zone to the lower corona. The two simulations differ mainly in the preexisting ambient magnetic field strength and in the properties of the inserted flux tube. We use the Oslo Staggered Code (OSC) to solve the full MHD equations with non-grey and non-LTE radiative transfer and thermal conduction along the magnetic field lines. We find a multitude of features that show a spatiotemporal evolution that is similar to that observed in type i spicules, which are characterized by parabolic height vs. time profiles, and are dominated by rapid upward motion at speeds of 10-30 km/s, followed by downward motion at similar velocities. We measured the parameters of the parabolic profile of the spicules and find similar correlations between the parameters as those found in observations. The values for height (...
Wareing, C J; Falle, S A E G; Van Loo, S
2016-01-01
We have used the AMR hydrodynamic code, MG, to perform 3D MHD simulations of the formation of clumpy and filamentary structure in a thermally unstable medium. A stationary thermally unstable spherical diffuse cloud with uniform density in pressure equilibrium with low density surroundings was seeded with random density variations and allowed to evolve. A range of magnetic field strengths threading the cloud have been explored, from beta=0.1 to beta=1.0 to the zero magnetic field case (beta=infinity), where beta is the ratio of thermal pressure to magnetic pressure. Once the density inhomogeneities had developed to the point where gravity started to become important, self-gravity was introduced to the simulation. With no magnetic field, clumps form within the cloud with aspect ratios of around unity, whereas in the presence of a relatively strong field (beta=0.1) these become filaments, then evolve into interconnected corrugated sheets that are predominantly perpendicular to the magnetic field. With magnetic a...
Extragalactic jets with helical magnetic fields: relativistic MHD simulations
Keppens, R; van der Holst, B; Casse, F
2008-01-01
Extragalactic jets are inferred to harbor dynamically important, organized magnetic fields which presumably aid in the collimation of the relativistic jet flows. We here explore by means of grid-adaptive, high resolution numerical simulations the morphology of AGN jets pervaded by helical field and flow topologies. We concentrate on morphological features of the bow shock and the jet beam behind the Mach disk, for various jet Lorentz factors and magnetic field helicities. We investigate the influence of helical magnetic fields on jet beam propagation in overdense external medium. We use the AMRVAC code, employing a novel hybrid block-based AMR strategy, to compute ideal plasma dynamics in special relativity. The helicity of the beam magnetic field is effectively transported down the beam, with compression zones in between diagonal internal cross-shocks showing stronger toroidal field regions. In comparison with equivalent low-relativistic jets which get surrounded by cocoons with vortical backflows filled by ...
Forced Reconnection in the Near Magnetotail: Onset and Energy Conversion in PIC and MHD Simulations
Birn, J.; Hesse, Michael
2014-01-01
Using two-dimensional particle-in-cell (PIC) together with magnetohydrodynamic (MHD) Q1 simulations of magnetotail dynamics, we investigate the evolution toward onset of reconnection and the subsequent energy transfer and conversion. In either case, reconnection onset is preceded by a driven phase, during which magnetic flux is added to the tail at the high-latitude boundaries, followed by a relaxation phase, during which the configuration continues to respond to the driving. The boundary deformation leads to the formation of thin embedded current sheets, which are bifurcated in the near tail, converging to a single sheet farther out in the MHD simulations. The thin current sheets in the PIC simulation are carried by electrons and are associated with a strong perpendicular electrostatic field, which may provide a connection to parallel potentials and auroral arcs and an ionospheric signal even prior to the onset of reconnection. The PIC simulation very well satisfies integral entropy conservation (intrinsic to ideal MHD) during this phase, supporting ideal ballooning stability. Eventually, the current intensification leads to the onset of reconnection, the formation and ejection of a plasmoid, and a collapse of the inner tail. The earthward flow shows the characteristics of a dipolarization front: enhancement of Bz, associated with a thin vertical electron current sheet in the PIC simulation. Both MHD and PIC simulations show a dominance of energy conversion from incoming Poynting flux to outgoing enthalpy flux, resulting in heating of the inner tail. Localized Joule dissipation plays only a minor role.
Constrained Transport vs. Divergence Cleanser Options in Astrophysical MHD Simulations
Lindner, Christopher C.; Fragile, P.
2009-01-01
In previous work, we presented results from global numerical simulations of the evolution of black hole accretion disks using the Cosmos++ GRMHD code. In those simulations we solved the magnetic induction equation using an advection-split form, which is known not to satisfy the divergence-free constraint. To minimize the build-up of divergence error, we used a hyperbolic cleanser function that simultaneously damped the error and propagated it off the grid. We have since found that this method produces qualitatively and quantitatively different behavior in high magnetic field regions than results published by other research groups, particularly in the evacuated funnels of black-hole accretion disks where Poynting-flux jets are reported to form. The main difference between our earlier work and that of our competitors is their use of constrained-transport schemes to preserve a divergence-free magnetic field. Therefore, to study these differences directly, we have implemented a constrained transport scheme into Cosmos++. Because Cosmos++ uses a zone-centered, finite-volume method, we can not use the traditional staggered-mesh constrained transport scheme of Evans & Hawley. Instead we must implement a more general scheme; we chose the Flux-CT scheme as described by Toth. Here we present comparisons of results using the divergence-cleanser and constrained transport options in Cosmos++.
Computer Code for Nanostructure Simulation
Filikhin, Igor; Vlahovic, Branislav
2009-01-01
Due to their small size, nanostructures can have stress and thermal gradients that are larger than any macroscopic analogue. These gradients can lead to specific regions that are susceptible to failure via processes such as plastic deformation by dislocation emission, chemical debonding, and interfacial alloying. A program has been developed that rigorously simulates and predicts optoelectronic properties of nanostructures of virtually any geometrical complexity and material composition. It can be used in simulations of energy level structure, wave functions, density of states of spatially configured phonon-coupled electrons, excitons in quantum dots, quantum rings, quantum ring complexes, and more. The code can be used to calculate stress distributions and thermal transport properties for a variety of nanostructures and interfaces, transport and scattering at nanoscale interfaces and surfaces under various stress states, and alloy compositional gradients. The code allows users to perform modeling of charge transport processes through quantum-dot (QD) arrays as functions of inter-dot distance, array order versus disorder, QD orientation, shape, size, and chemical composition for applications in photovoltaics and physical properties of QD-based biochemical sensors. The code can be used to study the hot exciton formation/relation dynamics in arrays of QDs of different shapes and sizes at different temperatures. It also can be used to understand the relation among the deposition parameters and inherent stresses, strain deformation, heat flow, and failure of nanostructures.
The intensity contrast of solar granulation: comparing Hinode SP results with MHD simulations
Danilovic, S.; Gandorfer, A.; Lagg, A.; SchÜssler, M.; Solanki, S.K.; Vögler, A.; Katsukawa, Y.; Tsuneta, S.
2008-01-01
Context. The contrast of granulation is an important quantity characterizing solar surface convection. Aims. We compare the intensity contrast at 630 nm, observed using the Spectro-Polarimeter (SP) aboard the Hinode satellite, with the 3D radiative MHD simulations of Vögler & Schüssler (2007, A&A, 4
Numerical simulation study of disk MHD generator for nonequilibrium plasma (NPG) system
Tsunoda, Kazumi [Shibaura Institute of Technology, Tokyo (Japan); Harada, Nob [Nagaoka Univ. of Technology (Japan)
1995-12-31
Design and performance prediction of a disk-shaped magnetohydrodynamic (MHD) generator, which is applied to the nonequilibrium plasma generator (NPG) system, have been carried out by means of a quasi-one-dimensional numerical simulation. The calculations have been performed for generator with constant height which is planned to be used for NPG-MHD disk generator pulse power demonstration. A maximum enthalpy extraction ratio obtained from the present calculation reached up to 20%, and, in this case, the electron temperature of working plasma fluctuated in the unstable regime against ionization instability. Taking into account this phenomenon, in order to obtain much higher generator performance, the MHD channel, in which electron temperature was kept at 5000 K, was designed. With this channel, enthalpy extraction ratio of 40% and output power of 7.2 MW were achieved without major modification of the supersonic nozzle, the inlet swirl vanes and the configuration of magnet system.
Monte Carlo simulation code modernization
CERN. Geneva
2015-01-01
The continual development of sophisticated transport simulation algorithms allows increasingly accurate description of the effect of the passage of particles through matter. This modelling capability finds applications in a large spectrum of fields from medicine to astrophysics, and of course HEP. These new capabilities however come at the cost of a greater computational intensity of the new models, which has the effect of increasing the demands of computing resources. This is particularly true for HEP, where the demand for more simulation are driven by the need of both more accuracy and more precision, i.e. better models and more events. Usually HEP has relied on the "Moore's law" evolution, but since almost ten years the increase in clock speed has withered and computing capacity comes in the form of hardware architectures of many-core or accelerated processors. To harness these opportunities we need to adapt our code to concurrent programming models taking advantages of both SIMD and SIMT architectures. Th...
MHD simulations of radiative jets from young stellar objects: Halpha emission
De Colle, F; Colle, Fabio De; Raga, Alejandro
2005-01-01
We study the H$\\alpha$ emission from jets using two-dimensional axisymmetrical simulations. We compare the emission obtained from hydrodynamic (HD) simulations with that obtained from magnetohydrodynamics (MHD) simulations. The magnetic field is supposed to be present in the jet only, and with a toroidal configuration. The simulations have time-dependent ejection velocities and different intensities for the initial magnetic field. The results show an increase in the H$\\alpha$ emission along the jet for the magnetized cases with respect to the HD case. The increase in the emission is due to a better collimation of the jet in the MHD case, and to a small increase in the shock velocity. These results could have important implications for the interpretation of the observations of jets from young stellar objects.
Magnetic fields in protoplanetary disks: from MHD simulations to ALMA observations
Bertrang, Gesa H -M; Wolf, Sebastian
2016-01-01
Magnetic fields significantly influence the evolution of protoplanetary disks and the formation of planets, following the predictions of numerous magnetohydrodynamic (MHD) simulations. However, these predictions are yet observationally unconstrained. To validate the predictions on the influence of magnetic fields on protoplanetary disks, we apply 3D radiative transfer simulations of the polarized emission of aligned aspherical dust grains that directly link 3D global non-ideal MHD simulations to ALMA observations. Our simulations show that it is feasible to observe the predicted toroidal large-scale magnetic field structures, not only in the ideal observations but also with high-angular resolution ALMA observations. Our results show further that high angular resolution observations by ALMA are able to identify vortices embedded in outer magnetized disk regions.
Magnetic fields in protoplanetary discs: from MHD simulations to ALMA observations
Bertrang, G. H.-M.; Flock, M.; Wolf, S.
2017-01-01
Magnetic fields significantly influence the evolution of protoplanetary discs and the formation of planets, following the predictions of numerous magnetohydrodynamic (MHD) simulations. However, these predictions are yet observationally unconstrained. To validate the predictions on the influence of magnetic fields on protoplanetary discs, we apply 3D radiative transfer simulations of the polarized emission of aligned aspherical dust grains that directly link 3D global non-ideal MHD simulations to Atacama Large Millimeter/submillimeter Array (ALMA) observations. Our simulations show that it is feasible to observe the predicted toroidal large-scale magnetic field structures, not only in the ideal observations but also with high-angular resolution ALMA observations. Our results show further that high-angular resolution observations by ALMA are able to identify vortices embedded in outer magnetized disc regions.
Comparison of empirical magnetic field models and global MHD simulations: The near-tail currents
Pulkkinen, T. I.; Baker, D. N.; Walker, R. J.; Raeder, J.; Ashour-Abdalla, M.
1995-01-01
The tail currents predicted by empirical magnetic field models and global MHD simulations are compared. It is shown that the near-Earth currents obtained from the MHD simulations are much weaker than the currents predicted by the Tsyganenko models, primarily because the ring current is not properly represented in the simulations. On the other hand, in the mid-tail and distant tail the lobe field strength predicted by the simulations is comparable to what is observed at about 50 R(sub E) distance, significantly larger than the very low lobe field values predicted by the Tsyganenko models at that distance. Ways to improve these complementary approaches to model the actual magnetospheric configuration are discussed.
Hirshman, S. P.; Shafer, M. W.; Seal, S. K.; Canik, J. M.
2016-04-01
> The SIESTA magnetohydrodynamic (MHD) equilibrium code has been used to compute a sequence of ideally stable equilibria resulting from numerical variation of the helical resonant magnetic perturbation (RMP) applied to an axisymmetric DIII-D plasma equilibrium. Increasing the perturbation strength at the dominant , resonant surface leads to lower MHD energies and increases in the equilibrium island widths at the (and sidebands) surfaces, in agreement with theoretical expectations. Island overlap at large perturbation strengths leads to stochastic magnetic fields which correlate well with the experimentally inferred field structure. The magnitude and spatial phase (around the dominant rational surfaces) of the resonant (shielding) component of the parallel current are shown to change qualitatively with the magnetic island topology.
Direct numerical simulation of dynamo transition for nonhelical MHD
Nath, Dinesh; Verma, Mahendra K [Department of Physics, Indian Institute of Technology Kanpur, Kanpur 208016 (India); Lessinnes, Thomas; Carati, Daniele [Physique Statistique et Plasmas, Universite Libre de Bruxellers, B-1050 Bruxelles (Belgium); Sarris, Ioannis [Department of Mechanical and Industrial Engineering, University of Thessaly, Volos (Greece)
2010-02-01
Pseudospectral Direct Numerical Simulation (DNS) has been performed to simulate dynamo transition for nonhelical magnetohydrodynamics turbulence. The numerical results are compared with a recent low-dimensional model [Verma et al. [13
Boss, Alan P
2013-01-01
Magnetic fields are important contributers to the dynamics of collapsing molecular cloud cores, and can have a major effect on whether collapse results in a single protostar or fragmentation into a binary or multiple protostar system. New models are presented of the collapse of magnetic cloud cores using the adaptive mesh refinement (AMR) code Enzo2.0. The code was used to calculate the ideal magnetohydrodynamics (MHD) of initially spherical, uniform density and rotation clouds with density perturbations, i.e., the Boss and Bodenheimer (1979) standard isothermal test case for three dimensional (3D) hydrodynamics (HD) codes. After first verifying that Enzo reproduces the binary fragmentation expected for the non-magnetic test case, a large set of models was computed with varied initial magnetic field strengths and directions with respect to the cloud core axis of rotation (parallel or perpendicular), density perturbation amplitudes, and equations of state. Three significantly different outcomes resulted: (1) c...
SOLAR WIND TURBULENCE FROM MHD TO SUB-ION SCALES: HIGH-RESOLUTION HYBRID SIMULATIONS
Franci, Luca; Verdini, Andrea; Landi, Simone [Dipartimento di Fisica e Astronomia, Università di Firenze, Largo E. Fermi 2, I-50125 Firenze (Italy); Matteini, Lorenzo [Department of Physics, Imperial College London, London SW7 2AZ (United Kingdom); Hellinger, Petr [Astronomical Institute, AS CR, Bocni II/1401, CZ-14100 Prague (Czech Republic)
2015-05-10
We present results from a high-resolution and large-scale hybrid (fluid electrons and particle-in-cell protons) two-dimensional numerical simulation of decaying turbulence. Two distinct spectral regions (separated by a smooth break at proton scales) develop with clear power-law scaling, each one occupying about a decade in wavenumbers. The simulation results simultaneously exhibit several properties of the observed solar wind fluctuations: spectral indices of the magnetic, kinetic, and residual energy spectra in the magnetohydrodynamic (MHD) inertial range along with a flattening of the electric field spectrum, an increase in magnetic compressibility, and a strong coupling of the cascade with the density and the parallel component of the magnetic fluctuations at sub-proton scales. Our findings support the interpretation that in the solar wind, large-scale MHD fluctuations naturally evolve beyond proton scales into a turbulent regime that is governed by the generalized Ohm’s law.
MHD simulations of three-dimensional Resistive Reconnection in a cylindrical plasma column
Striani, Edoardo; Vaidya, Bhargav; Bodo, Gianluigi; Ferrari, Attilio
2016-01-01
Magnetic reconnection is a plasma phenomenon where a topological rearrangement of magnetic field lines with opposite polarity results in dissipation of magnetic energy into heat, kinetic energy and particle acceleration. Such a phenomenon is considered as an efficient mechanism for energy release in laboratory and astrophysical plasmas. An important question is how to make the process fast enough to account for observed explosive energy releases. The classical model for steady state magnetic reconnection predicts reconnection times scaling as $S^{1/2}$ (where $S$ is the Lundquist number) and yields times scales several order of magnitude larger than the observed ones. Earlier two-dimensional MHD simulations showed that for large Lundquist number the reconnection time becomes independent of $S$ ("fast reconnection" regime) due to the presence of the secondary tearing instability that takes place for $S \\gtrsim 1 \\times 10^4$. We report on our 3D MHD simulations of magnetic reconnection in a magnetically confin...
3D simulations of fluctuation spectra in the hall-MHD plasma.
Shaikh, Dastgeer; Shukla, P K
2009-01-30
Turbulent spectral cascades are investigated by means of fully three-dimensional (3D) simulations of a compressible Hall-magnetohydrodynamic (H-MHD) plasma in order to understand the observed spectral break in the solar wind turbulence spectra in the regime where the characteristic length scales associated with electromagnetic fluctuations are smaller than the ion gyroradius. In this regime, the results of our 3D simulations exhibit that turbulent spectral cascades in the presence of a mean magnetic field follow an omnidirectional anisotropic inertial-range spectrum close to k(-7/3). The latter is associated with the Hall current arising from nonequal electron and ion fluid velocities in our 3D H-MHD plasma model.
Reactive transport codes for subsurface environmental simulation
Steefel, C.I.; Appelo, C.A.J.; Arora, B.; Kalbacher, D.; Kolditz, O.; Lagneau, V.; Lichtner, P.C.; Mayer, K.U.; Meeussen, J.C.L.; Molins, S.; Moulton, D.; Shao, D.; Simunek, J.; Spycher, N.; Yabusaki, S.B.; Yeh, G.T.
2015-01-01
A general description of the mathematical and numerical formulations used in modern numerical reactive transport codes relevant for subsurface environmental simulations is presented. The formulations are followed by short descriptions of commonly used and available subsurface simulators that conside
Takase, Haruhiko [Japan Atomic Energy Research Inst., Naka, Ibaraki (Japan). Naka Fusion Research Establishment; Senda, Ikuo
1999-04-01
A Toroidally Symmetric Plasma Simulation (TSPS) code has been developed for investigating the position and shape control on tokamak plasmas. The analyses of three-dimensional eddy currents on the conducting components around the plasma and the two-dimensional magneto-hydrodynamic (MHD) equilibrium are taken into account in this code. The code can analyze the plasma position and shape control during the minor disruption in which the deformation of plasma is not negligible. Using the ITER (International Thermonuclear Experimental Reactor) parameters, some examples of calculations are shown in this paper. (author)
3D simulations of disc-winds extending radially self-similar MHD models
Stute, Matthias; Vlahakis, Nektarios; Tsinganos, Kanaris; Mignone, Andrea; Massaglia, Silvano
2014-01-01
Disc-winds originating from the inner parts of accretion discs are considered as the basic component of magnetically collimated outflows. The only available analytical MHD solutions to describe disc-driven jets are those characterized by the symmetry of radial self-similarity. However, radially self-similar MHD jet models, in general, have three geometrical shortcomings, (i) a singularity at the jet axis, (ii) the necessary assumption of axisymmetry, and (iii) the non-existence of an intrinsic radial scale, i.e. the jets formally extend to radial infinity. Hence, numerical simulations are necessary to extend the analytical solutions towards the axis, by solving the full three-dimensional equations of MHD and impose a termination radius at finite radial distance. We focus here on studying the effects of relaxing the (ii) assumption of axisymmetry, i.e. of performing full 3D numerical simulations of a disc-wind crossing all magnetohydrodynamic critical surfaces. We compare the results of these runs with previou...
Linear Simulations of the Cylindrical Richtmyer-Meshkov Instability in Hydrodynamics and MHD
Gao, Song
2013-05-01
The Richtmyer-Meshkov instability occurs when density-stratified interfaces are impulsively accelerated, typically by a shock wave. We present a numerical method to simulate the Richtmyer-Meshkov instability in cylindrical geometry. The ideal MHD equations are linearized about a time-dependent base state to yield linear partial differential equations governing the perturbed quantities. Convergence tests demonstrate that second order accuracy is achieved for smooth flows, and the order of accuracy is between first and second order for flows with discontinuities. Numerical results are presented for cases of interfaces with positive Atwood number and purely azimuthal perturbations. In hydrodynamics, the Richtmyer-Meshkov instability growth of perturbations is followed by a Rayleigh-Taylor growth phase. In MHD, numerical results indicate that the perturbations can be suppressed for sufficiently large perturbation wavenumbers and magnetic fields.
3-D Simulations of MHD Jets - The Stability Problem
Nakamura, M; Nakamura, Masanori; Meier, David L.
2003-01-01
Non-relativistic three-dimensional magnetohydrodynamic simulations of Poynting-flux-dominated (PFD) jets are presented. Our study focuses on the propagation of strongly magnetized hypersonic but sub-Alfv\\'enic flow ($C_{\\rm s}^2 1$), driven in large part by the radial component of the Lorentz force.
A comparative study on 3-D solar wind structure observed by Ulysses and MHD simulation
FENG Xueshang; XIANG Changqing; ZHONG Dingkun; FAN Quanlin
2005-01-01
During Ulysses' first rapid pole-to-pole transit from September 1994 to June 1995, its observations showed that middle- or high-speed solar winds covered all latitudes except those between -20° and +20° near the ecliptic plane,where the velocity was 300-450 km/s. At poleward 40°,however, only fast solar winds at the speed of 700-870 km/s were observed. In addition, the transitions from low-speed wind to high-speed wind or vice versa were abrupt. In this paper, the large-scale structure of solar wind observed by Ulysses near solar minimum is simulated by using the three-dimensional numerical MHD model. The model combines TVD Lax-Friedrich scheme and MacCormack Ⅱ scheme and decomposes the calculation region into two regions: one from 1 to 22 Rs and the other from 18 Rs to 1 AU.Based on the observations of the solar photospheric magnetic field and an addition of the volumetric heating to MHD equations, the large-scale solar wind structure mentioned above is reproduced by using the three-dimensional MHD model and the numerical results are roughly consistent with Ulysses' observations. Our simulation shows that the initial magnetic field topology and the addition of volume heating may govern the bimodal structure of solar wind observed by Ulysses and also demonstrates that the three-dimensional MHD numerical model used here is efficient in modeling the large-scale solar wind structure.
Cosmological MHD simulations of cluster formation with anisotropic thermal conduction
Ruszkowski, M; Bruggen, M; Parrish, I; Oh, S Peng
2010-01-01
(abridged) The ICM has been suggested to be buoyantly unstable in the presence of magnetic field and anisotropic thermal conduction. We perform first cosmological simulations of galaxy cluster formation that simultaneously include magnetic fields, radiative cooling and anisotropic thermal conduction. In isolated and idealized cluster models, the magnetothermal instability (MTI) tends to reorient the magnetic fields radially. Using cosmological simulations of the Santa Barbara cluster we detect radial bias in the velocity and magnetic fields. Such radial bias is consistent with either the inhomogeneous radial gas flows due to substructures or residual MTI-driven field rearangements that are expected even in the presence of turbulence. Although disentangling the two scenarios is challenging, we do not detect excess bias in the runs that include anisotropic thermal conduction. The anisotropy effect is potentially detectable via radio polarization measurements with LOFAR and SKA and future X-ray spectroscopic stu...
Shen, Fang; Zhang, Jie; Hess, Phillip; Wang, Yuming; Feng, Xueshang; Cheng, Hongze; Yang, Yi
2015-01-01
The dynamic process of coronal mass ejections (CMEs) in the heliosphere provides us the key information for evaluating CMEs' geo-effectiveness and improving the accurate prediction of CME induced Shock Arrival Time (SAT) at the Earth. We present a data constrained three dimensional (3D) magnetohydrodynamic (MHD) simulation of the evolution of the CME in a realistic ambient solar wind for the July 12-16, 2012 event by using the 3D COIN-TVD MHD code. A detailed comparison of the kinematic evolution of the CME between the observations and the simulation is carried out, including the usage of the time-elongation maps from the perspectives of both Stereo A and Stereo B. In this case study, we find that our 3D COIN-TVD MHD model, with the magnetized plasma blob as the driver, is able to re-produce relatively well the real 3D nature of the CME in morphology and their evolution from the Sun to Earth. The simulation also provides a relatively satisfactory comparison with the in-situ plasma data from the Wind spacecraf...
Global MHD modeling of resonant ULF waves: Simulations with and without a plasmasphere
Claudepierre, S. G.; Toffoletto, F. R.; Wiltberger, M.
2016-01-01
We investigate the plasmaspheric influence on the resonant mode coupling of magnetospheric ultralow frequency (ULF) waves using the Lyon-Fedder-Mobarry (LFM) global magnetohydrodynamic (MHD) model. We present results from two different versions of the model, both driven by the same solar wind conditions: one version that contains a plasmasphere (the LFM coupled to the Rice Convection Model, where the Gallagher plasmasphere model is also included) and another that does not (the stand-alone LFM). We find that the inclusion of a cold, dense plasmasphere has a significant impact on the nature of the simulated ULF waves. For example, the inclusion of a plasmasphere leads to a deeper (more earthward) penetration of the compressional (azimuthal) electric field fluctuations, due to a shift in the location of the wave turning points. Consequently, the locations where the compressional electric field oscillations resonantly couple their energy into local toroidal mode field line resonances also shift earthward. We also find, in both simulations, that higher-frequency compressional (azimuthal) electric field oscillations penetrate deeper than lower frequency oscillations. In addition, the compressional wave mode structure in the simulations is consistent with a radial standing wave oscillation pattern, characteristic of a resonant waveguide. The incorporation of a plasmasphere into the LFM global MHD model represents an advance in the state of the art in regard to ULF wave modeling with such simulations. We offer a brief discussion of the implications for radiation belt modeling techniques that use the electric and magnetic field outputs from global MHD simulations to drive particle dynamics.
Global MHD modeling of resonant ULF waves: Simulations with and without a plasmasphere.
Claudepierre, S G; Toffoletto, F R; Wiltberger, M
2016-01-01
We investigate the plasmaspheric influence on the resonant mode coupling of magnetospheric ultralow frequency (ULF) waves using the Lyon-Fedder-Mobarry (LFM) global magnetohydrodynamic (MHD) model. We present results from two different versions of the model, both driven by the same solar wind conditions: one version that contains a plasmasphere (the LFM coupled to the Rice Convection Model, where the Gallagher plasmasphere model is also included) and another that does not (the stand-alone LFM). We find that the inclusion of a cold, dense plasmasphere has a significant impact on the nature of the simulated ULF waves. For example, the inclusion of a plasmasphere leads to a deeper (more earthward) penetration of the compressional (azimuthal) electric field fluctuations, due to a shift in the location of the wave turning points. Consequently, the locations where the compressional electric field oscillations resonantly couple their energy into local toroidal mode field line resonances also shift earthward. We also find, in both simulations, that higher-frequency compressional (azimuthal) electric field oscillations penetrate deeper than lower frequency oscillations. In addition, the compressional wave mode structure in the simulations is consistent with a radial standing wave oscillation pattern, characteristic of a resonant waveguide. The incorporation of a plasmasphere into the LFM global MHD model represents an advance in the state of the art in regard to ULF wave modeling with such simulations. We offer a brief discussion of the implications for radiation belt modeling techniques that use the electric and magnetic field outputs from global MHD simulations to drive particle dynamics.
Yang, H.; Bhattacharjee, A.; Forbes, T. G.
2008-12-01
It has long been suggested that eruptive phenomena such as coronal mass ejections, prominence eruptions, and large flares might be caused by a loss of equilibrium in a coronal flux rope (Van Tend and Kuperus, 1978). Forbes et al. (1994) developed an analytical two-dimensional model in which eruptions occur due to a catastrophic loss of equilibrium and relaxation to a lower-energy state containing a thin current sheet. Magnetic reconnection then intervenes dynamically, leading to the release of magnetic energy and expulsion of a plasmoid. We have carried out high-Lundquist-number simulations to test the loss-of equilibrium mechanism, and demonstrated that it does indeed occur in the quasi-ideal limit. We have studied the subsequent dynamical evolution of the system in resistive and Hall MHD models for single as well as multiple arcades. The typical parallel electric fields are super-Dreicer, which makes it necessary to include collisionless effects via a generalized Ohm's law. It is shown that the nature of the local dissipation mechanism has a significant effect on the global geometry and dynamics of the magnetic configuration. The presence of Hall currents is shown to alter the length of the current sheet and the jets emerging from the reconnection site, directed towards the chromosphere. Furthermore, Hall MHD effects break certain symmetries of resistive MHD dynamics, and we explore their observational consequences.
Klimas, A. J.; Uritsky, V.; Vassiliadis, D.; Baker, D. N.
2005-01-01
Loading and consequent unloading of magnetic flux is an essential element of the substorm cycle in Earth's magnetotail. We are unaware of an available global MHD magnetospheric simulation model that includes a loading- unloading cycle in its behavior. Given the central role that MHD models presently play in the development of our understanding of magnetospheric dynamics, and given the present plans for the central role that these models will play in ongoing space weather prediction programs, it is clear that this failure must be corrected. A 2-dimensional numerical driven current-sheet model has been developed that incorporates an idealized current- driven instability with a resistive MHD system. Under steady loading, the model exhibits a global loading- unloading cycle. The specific mechanism for producing the loading-unloading cycle will be discussed. It will be shown that scale-free avalanching of electromagnetic energy through the model, from loading to unloading, is carried by repetitive bursts of localized reconnection. Each burst leads, somewhat later, to a field configuration that is capable of exciting a reconnection burst again. This process repeats itself in an intermittent manner while the total field energy in the system falls. At the end of an unloading interval, the total field energy is reduced to well below that necessary to initiate the next unloading event and, thus, a loading-unloading cycle results. It will be shown that, in this model, it is the topology of bursty localized reconnection that is responsible for the appearance of the loading-unloading cycle.
You’re Cut Off: HD and MHD Simulations of Truncated Accretion Disks
Hogg, J. Drew; Reynolds, Christopher S.
2017-01-01
Truncated accretion disks are commonly invoked to explain the spectro-temporal variability from accreting black holes in both small systems, i.e. state transitions in galactic black hole binaries (GBHBs), and large systems, i.e. low-luminosity active galactic nuclei (LLAGNs). In the canonical truncated disk model of moderately low accretion rate systems, gas in the inner region of the accretion disk occupies a hot, radiatively inefficient phase, which leads to a geometrically thick disk, while the gas in the outer region occupies a cooler, radiatively efficient phase that resides in the standard geometrically thin disk. Observationally, there is strong empirical evidence to support this phenomenological model, but a detailed understanding of the disk behavior is lacking. We present well-resolved hydrodynamic (HD) and magnetohydrodynamic (MHD) numerical models that use a toy cooling prescription to produce the first sustained truncated accretion disks. Using these simulations, we study the dynamics, angular momentum transport, and energetics of a truncated disk in the two different regimes. We compare the behaviors of the HD and MHD disks and emphasize the need to incorporate a full MHD treatment in any discussion of truncated accretion disk evolution.
A Resistive MHD Simulation of the Shear Flow Effects on the Structure of Reconnection Layer
SUN Xiaoxia; WANG Chunhua; LIN Yu; WANG Xiaogang
2007-01-01
By using a one-dimensional resistive magnetohydrodynamic (MHD) model, the Rie-mann problem is solved numerically for the structure of the reconnection layer under a sheared flow along the anti-parallel magnetic field components. The simulation is carried out for general cases with symmetric or asymmetric plasma densities and magnetic fields on the two sides of the initial current sheet, and cases with or without a guide magnetic field, as in various space and fusion plasmas. The generation of MHD discontinuities in the reconnection layer is discussed, including time-dependent intermediate shocks, intermediate shocks, slow shocks, slow expansion waves, and the contact discontinuity. It is shown that the structure of the reconnection layer is significantly affected by the presence of the shear flow. For an initial symmetric current sheet, the symmetry condition is altered due to the shear flow. For cases with an asymmetric initial current sheet, as at the Earth's magnetopause, the strengths of MHD discontinuities change significantly with the shear flow speed. Moreover, the general results for the reconnection layers in the outflow regions on either side of the X line are discussed systematically for the first time.
Numerical Simulations of Driven Supersonic Relativistic MHD Turbulence
Zrake, Jonathan; 10.1063/1.3621748
2011-01-01
Models for GRB outflows invoke turbulence in relativistically hot magnetized fluids. In order to investigate these conditions we have performed high-resolution three-dimensional numerical simulations of relativistic magneto-hydrodynamical (RMHD) turbulence. We find that magnetic energy is amplified to several percent of the total energy density by turbulent twisting and folding of magnetic field lines. Values of epsilon_B near 1% are thus naturally expected. We study the dependence of saturated magnetic field energy fraction as a function of Mach number and relativistic temperature. We then present power spectra of the turbulent kinetic and magnetic energies. We also present solenoidal (curl-like) and dilatational (divergence-like) power spectra of kinetic energy. We propose that relativistic effects introduce novel couplings between these spectral components. The case we explore in most detail is for equal amounts of thermal and rest mass energy, corresponding to conditions after collisions of shells with re...
Photon Scattering in 3D Radiative MHD Simulations
Hayek, Wolfgang
2009-09-01
Recent results from 3D time-dependent radiative hydrodynamic simulations of stellar atmospheres are presented, which include the effects of coherent scattering in the radiative transfer treatment. Rayleigh scattering and electron scattering are accounted for in the source function, requiring an iterative solution of the transfer equation. Opacities and scattering coefficients are treated in the multigroup opacity approximation. The impact of scattering on the horizontal mean temperature structure is investigated, which is an important diagnostic for model atmospheres, with implications for line formation and stellar abundance measurements. We find that continuum scattering is not important for the atmosphere of a metal-poor Sun with metailicity [Fe/H] = -3.0, similar to the previously investigated photosphere at solar metallicity.
Broderick, Avery E
2010-01-01
For the first time it has become possible to compare global 3D general relativistic magnetohydrodynamic (GRMHD) jet formation simulations directly to very-long baseline interferometric multi-frequency polarization observations of the pc-scale structure of active galactic nucleus (AGN) jets. Unlike the jet emission, which requires post hoc modeling of the non-thermal electrons, the Faraday rotation measures (RMs) depend primarily upon simulated quantities and thus provide a robust way in which to confront simulations with observations. We compute RM distributions of 3D global GRMHD jet formation simulations, with which we explore the dependence upon model and observational parameters, emphasizing the signatures of structures generic to the theory of MHD jets. With typical parameters, we find that it is possible to reproduce the observed magnitudes and many of the structures found in AGN jet RMs, including the presence of transverse RM gradients. In our simulations the RMs are generated within a smooth extensio...
2D-simulation of stationary MHD flows in the ducts of rectangular cross-section
Khalzov, Ivan; Ilgisonis, Victor
2005-10-01
The numerical code for a calculation of 2D stationary MHD flows of incompressible conducting viscous fluids (liquid metals) in straight and circular ducts of rectangular cross-section is developed. The flows are driven by the electrical current perpendicular both to the duct axis and to the external magnetic field. The code generalizes the well-known iterative Gauss-Seidel method for the case of systems of elliptic equations. The algorithm developed allows us to carry out the calculations of stationary flows in a wide range of Hartmann (Ha=110^3) and Reynolds (Re=110^6) numbers. The numerical results are presented for the experimental device, which is under construction in Russia.
MHD Simulations of a Moving Subclump with Heat Conduction
Asai, N; Matsumoto, R; Asai, Naoki; Fukuda, Naoya; Matsumoto, Ryoji
2004-01-01
High resolution observations of cluster of galaxies by Chandra have revealed the existence of an X-ray emitting comet-like galaxy C153 in the core of cluster of galaxies A2125. The galaxy C153 moving fast in the cluster core has a distinct X-ray tail on one side, obviously due to ram pressure stripping, since the galaxy C153 crossed the central region of A2125. The X-ray emitting plasma in the tail is substantially cooler than the ambient plasma. We present results of two-dimensional magnetohydrodynamic simulations of the time evolution of a subclump like C153 moving in magnetized intergalactic matter. Anisotropic heat conduction is included. We found that the magnetic fields are essential for the existence of the cool X-ray tail, because in non-magnetized plasma the cooler subclump tail is heated up by isotropic heat conduction from the hot ambient plasma and does not form such a comet-like tail.
MRI-driven Accretion onto Magnetized stars: Axisymmetric MHD Simulations
Romanova, Marina M; Koldoba, Alexander V; Lovelace, Richard V E
2011-01-01
We present the first results of a global axisymmetric simulation of accretion onto rotating magnetized stars from a turbulent, MRI-driven disk. The angular momentum is transported outward by the magnetic stress of the turbulent flow with a rate corresponding to a Shakura-Sunyaev viscosity parameter alpha\\approx 0.01-0.04. The result of the disk-magnetosphere interaction depends on the orientation of the poloidal field in the disk relative to that of the star at the disk-magnetosphere boundary. If fields have the same polarity, then the magnetic flux is accumulated at the boundary and blocks the accretion which leads to the accumulation of matter at the boundary. Subsequently, this matter accretes to the star in outburst before accumulating again. Hence, the cycling, `bursty' accretion is observed. If the disc and stellar fields have opposite polarity, then the field reconnection enhances the penetration of the disk matter towards the deeper field lines of the magnetosphere. However, the magnetic stress at the...
MHD simulation of solar wind and multiple coronal mass ejections with internal magnetic flux ropes
Shiota, Daiko
2017-08-01
Solar wind and CMEs are the main drivers of various types of space weather disturbance. The profile of IMF Bz is the most important parameter for space weather forecasts because various magnetospheric disturbances are caused by the southward IMF brought on the Earth. Recently, we have developed MHD simulation of the solar wind, including a series of multiple CMEs with internal spheromak-type magnetic fields on the basis of observations of photospheric magnetic fields and coronal images. The MHD simulation is therefore capable of predicting the time profile of the IMF at the Earth, in relation to the passage of a magnetic cloud within a CME. In order to evaluate the current ability of our simulation, we demonstrate a test case: the propagation and interaction process of multiple CMEs associated with the highly complex active region NOAA 10486 in October to November 2003. The results of a simulation successfully reproduced the arrival at the Earth’s position of a large amount of southward magnetic flux, which is capable of causing an intense magnetic storm, and provided an implication of the observed complex time profile of the solar wind parameters at the Earth as a result of the interaction of a few specific CMEs.
3D MHD VDE and disruptions simulations of tokamaks plasmas including some ITER scenarios
Paccagnella, R.; Strauss, H. R.; Breslau, J.
2009-03-01
Tokamaks vertical displacement events (VDEs) and disruptions simulations in toroidal geometry by means of a single fluid visco-resistive magneto-hydro-dynamic (MHD) model are presented in this paper. The plasma model is completed with the presence of a 2D wall with finite resistivity which allows the study of the relatively slowly growing magnetic perturbation, the resistive wall mode (RWM), which is, in this paper, the main drive of the disruption evolution. Amplitudes and asymmetries of the halo currents pattern at the wall are also calculated and comparisons with tokamak experimental databases and predictions for ITER are given.
Wexler, David B.; Hollweg, Joseph V.; Jensen, Elizabeth; Lionello, Roberto; Macneice, Peter J.; Coster, Anthea J.
2017-08-01
Study of coronal MHD wave energetics relies upon accurate representation of plasma particle number densities (ne) and magnetic field strengths. In the lower corona, these parameters are obtained indirectly, and typically presented as empirical equations as a function of heliocentric radial distance (solar offset, SO). The development of coronal global models using synoptic solar surface magnetogram inputs has provided refined characterization of the coronal plasma organization and magnetic field. We present a cross-analysis between a MHD thermodynamic simulation and Faraday rotation (FR) observations over SO 1.63-1.89 solar radii (Rs) near solar minimum. MESSENGER spacecraft radio signals with a line of sight (LOS) passing through the lower corona were recorded in dual polarization using the Green Bank Telescope in November 2009. Polarization position angle changes were obtained from Stokes parameters. The magnetic field vector (B) and ne along the LOS were obtained from a MHD thermodynamic simulation provided by the Community Coordinated Modeling Center. The modeled FR was computed as the integrated product of ne and LOS-aligned B component. The observations over the given SO range yielded an FR change of 7 radians. The simulation reproduced this change when the modeled ne was scaled up by 2.8x, close to values obtained using the Allen-Baumbach equation. No scaling of B from the model was necessary. A refined fit to the observations was obtained when the observationally based total electron content (TEC) curves were introduced. Changes in LOS TEC were determined from radio frequency shifts as the signal passed to successively lower electron concentrations during egress. A good fit to the observations was achieved with an offset of 7e21 m-2 added. Back-calculating ne along the LOS from the TEC curves, we found that the equivalent ne scaling compared to the model output was higher by a factor of 3. The combination of solar surface magnetogram-based MHD coronal
Inertial Current Generators of Poynting Flux in MHD Simulations of Black Hole Ergospheres
Punsly, B
2005-01-01
This Letter investigates the physics that is responsible for creating the current system that supports the outgoing Poynting flux emanating from the ergosphere of a rotating black hole in the limit that the magnetic energy density greatly exceeds the plasma rest mass density (magnetically dominated limit). The underlying physics is derived from published three-dimensional simulations that obey the general relativistic equations of perfect magnetohydrodynamics (MHD). It is found that the majority of the Poynting flux emitted from the magnetically dominated regions of the ergosphere has a source associated with inertial effects outside of the event horizon.
Kawasaki, Akira; Kubota, Kenichi; Funaki, Ikkoh; Okuno, Yoshihiro
2016-09-01
Steady-state and self-field magnetoplasmadynamic (MPD) thruster, which utilizes high-intensity direct-current (DC) discharge, is one of the prospective candidates of future high-power electric propulsion devices. In order to accurately assess the thrust performance and the electrode temperature, input electric power and wall heat flux must correctly be evaluated where electrostatic sheaths formed in close proximity of the electrodes affect these quantities. Conventional model simulates only plasma flows occurring in MPD thrusters with the absence of electrostatic sheath consideration. Therefore, this study extends the conventional model to a coupled magnetohydrodynamic (MHD) and thermal model by incorporating the phenomena relevant to the electrostatic sheaths. The sheaths are implemented as boundary condition of the MHD model on the walls. This model simulated the operation of the 100-kW-class thruster at discharge current ranging from 6 to 10 kA with argon propellant. The extended model reproduced the discharge voltages and wall heat load which are consistent with past experimental results. In addition, the simulation results indicated that cathode sheath voltages account for approximately 5-7 V subject to approximately 20 V of discharge voltages applied between the electrodes. This work was supported by JSPS KAKENHI Grant Numbers 26289328 and 15J10821.
MHD simulations of three-dimensional resistive reconnection in a cylindrical plasma column
Striani, E.; Mignone, A.; Vaidya, B.; Bodo, G.; Ferrari, A.
2016-11-01
Magnetic reconnection is a plasma phenomenon where a topological rearrangement of magnetic field lines with opposite polarity results in dissipation of magnetic energy into heat, kinetic energy and particle acceleration. Such a phenomenon is considered as an efficient mechanism for energy release in laboratory and astrophysical plasmas. An important question is how to make the process fast enough to account for observed explosive energy releases. The classical model for steady state magnetic reconnection predicts reconnection times scaling as S1/2 (where S is the Lundquist number) and yields time-scales several order of magnitude larger than the observed ones. Earlier two-dimensional MHD simulations showed that for large Lundquist number the reconnection time becomes independent of S (`fast reconnection' regime) due to the presence of the secondary tearing instability that takes place for S ≳ 1 × 104. We report on our 3D MHD simulations of magnetic reconnection in a magnetically confined cylindrical plasma column under either a pressure balanced or a force-free equilibrium and compare the results with 2D simulations of a circular current sheet. We find that the 3D instabilities acting on these configurations result in a fragmentation of the initial current sheet in small filaments, leading to enhanced dissipation rate that becomes independent of the Lundquist number already at S ≃ 1 × 103.
Kubota, Y.; Nagatsuma, T.; Den, M.; Tanaka, T.; Fujita, S.
2015-12-01
We are developing a real-time numerical simulator for the solar-wind-magnetosphere-ionosphere coupling system using next generation magnetosphere-ionosphere coupling global MHD simulation called REPPU (REProduce Plasma Universe) code. The feature of simulation has an advanced robustness to strong solar wind case because a triangular grid is used, which is able to calculate in the uniform accuracy over the whole region. Therefore we can simulate extreme event such as the Bastille day storm. The resolution is 7682 grids in the horizontal direction and 240 grids in the radial direction. The inner boundary of the simulation box is set at 2.6 Re. We investigate the reproduction of the magnetosphere-ionosphere coupling simulation in strong solar wind case. Therefore we compared the simulation results with the observation of the Bastille day storm event (2000/7/15), in which the solar wind velocity is above 1000 km/s and the value of Bz reached -60 nT. Especially, we focus the cross polar cap potential (CPCP) saturation and time variation because the CPCP represents the value of magnetospheric - ionospheric convection strength via region 1 current. The CPCP depends on solar wind electric field, dynamic pressure and ionospheric conductivity [Siscoe et al., 2002; Kivelson et al., 2008]. The model of Kivelson et al. [2008] shows a good reproduction to the CPCP variation. However their study assumes that the ionospheric conductivity is constant. The conductivity in our simulation of the Bastille day event is varied by the auroral activity. In this lecture, we discuss the effect of both the auroral conductance and solar EUV-driven conductance to CPCP saturation.
The stellar atmosphere simulation code Bifrost. Code description and validation
Gudiksen, B. V.; Carlsson, M.; Hansteen, V. H.; Hayek, W.; Leenaarts, J.; Martínez-Sykora, J.
2011-07-01
Context. Numerical simulations of stellar convection and photospheres have been developed to the point where detailed shapes of observed spectral lines can be explained. Stellar atmospheres are very complex, and very different physical regimes are present in the convection zone, photosphere, chromosphere, transition region and corona. To understand the details of the atmosphere it is necessary to simulate the whole atmosphere since the different layers interact strongly. These physical regimes are very diverse and it takes a highly efficient massively parallel numerical code to solve the associated equations. Aims: The design, implementation and validation of the massively parallel numerical code Bifrost for simulating stellar atmospheres from the convection zone to the corona. Methods: The code is subjected to a number of validation tests, among them the Sod shock tube test, the Orzag-Tang colliding shock test, boundary condition tests and tests of how the code treats magnetic field advection, chromospheric radiation, radiative transfer in an isothermal scattering atmosphere, hydrogen ionization and thermal conduction. Results.Bifrost completes the tests with good results and shows near linear efficiency scaling to thousands of computing cores.
Deng, Wei [Los Alamos National Laboratory
2015-07-21
The question of the energy composition of the jets/outflows in high-energy astrophysical systems, e.g. GRBs, AGNs, is taken up first: Matter-flux-dominated (MFD), σ < 1, and/or Poynting-flux-dominated (PFD), σ >1? The standard fireball IS model and dissipative photosphere model are MFD, while the ICMART (Internal-Collision-induced MAgnetic Reconnection and Turbulence) model is PFD. Motivated by ICMART model and other relevant problems, such as “jets in a jet” model of AGNs, the author investigates the models from the EMF energy dissipation efficiency, relativistic outflow generation, and σ evolution points of view, and simulates collisions between high-σ blobs to mimic the situation of the interactions inside the PFD jets/outflows by using a 3D SRMHD code which solves the conservative form of the ideal MHD equations. σ_{b,f} is calculated from the simulation results (threshold = 1). The efficiency obtained from this hybrid method is similar to the efficiency got from the energy evolution of the simulations (35.2%). Efficiency is nearly σ independent, which is also confirmed by the hybrid method. σ_{b,i} - σ_{b,f} provides an interesting linear relationship. Results of several parameter studies of EMF energy dissipation efficiency are shown.
Kinetic cascade beyond MHD of solar wind turbulence in two-dimensional hybrid simulations
Verscharen, Daniel; Motschmann, Uwe; Müller, Joachim
2012-01-01
The nature of solar wind turbulence in the dissipation range at scales much smaller than the large MHD scales remains under debate. Here a two-dimensional model based on the hybrid code abbreviated as A.I.K.E.F. is presented, which treats massive ions as particles obeying the kinetic Vlasov equation and massless electrons as a neutralizing fluid. Up to a certain wavenumber in the MHD regime, the numerical system is initialized by assuming a superposition of isotropic Alfv\\'en waves with amplitudes that follow the empirically confirmed spectral law of Kolmogorov. Then turbulence develops and energy cascades into the dispersive spectral range, where also dissipative effects occur. Under typical solar wind conditions, weak turbulence develops as a superposition of normal modes in the kinetic regime. Spectral analysis in the direction parallel to the background magnetic field reveals a cascade of left-handed Alfv\\'en/ion-cyclotron waves up to wave vectors where their resonant absorption sets in, as well as a cont...
Ju, Wenhua; Zhu, Zhaohuan
2016-01-01
We present results from the first global 3D MHD simulations of accretion disks in Cataclysmic Variable (CV) systems in order to investigate the relative importance of angular momentum transport via turbulence driven by the magnetorotational instability (MRI) compared to that driven by spiral shock waves. Remarkably, we find that even with vigorous MRI turbulence, spiral shocks are an important component to the overall angular momentum budget, at least when temperatures in the disk are high (so that Mach numbers are low). In order to understand the excitation, propagation, and damping of spiral density waves in our simulations more carefully, we perform a series of 2D global hydrodynamical simulations with various equation of states and both with and without mass inflow via the Lagrangian point (L1). Compared with previous similar studies, we find the following new results. 1) Linear wave dispersion relation fits the pitch angles of spiral density waves very well. 2) We demonstrate explicitly that mass accreti...
Small scale magnetosphere: Laboratory experiment, physical model and Hall MHD simulation
Shaikhislamov, I F; Zakharov, Yu P; Boyarintsev, E L; Melekhov, A V; Posukh, V G; Ponomarenko, A G
2011-01-01
A problem of magnetosphere formation on ion inertia scale around weakly magnetized bodies is investigated by means of laboratory experiment, analytical analysis and 2.5D Hall MHD simulation. Experimental evidence of specific magnetic field generated by the Hall term is presented. Direct comparison of regimes with small and large ion inertia length revealed striking differences in measured magnetopause position and plasma stand off distance. Analytical model is presented, which explains such basic features of mini-magnetosphere observed in previous kinetic simulations as disappearance of bow shock and plasma stopping at Stoermer particle limit instead of pressure balance distance. Numerical simulation is found to be in a good agreement with experiments and analytical model. It gives detailed spatial structure of Hall field and reveals that while ions penetrate deep inside mini-magnetosphere electrons overflow around it along magnetopause boundary.
Angular Momentum Transport by Acoustic Modes Generated in the Boundary Layer II: MHD Simulations
Belyaev, Mikhail A; Stone, James M
2013-01-01
We perform global unstratified 3D magnetohydrodynamic simulations of an astrophysical boundary layer (BL) -- an interface region between an accretion disk and a weakly magnetized accreting object such as a white dwarf -- with the goal of understanding the effects of magnetic field on the BL. We use cylindrical coordinates with an isothermal equation of state and investigate a number of initial field geometries including toroidal, vertical, and vertical with zero net flux. Our initial setup consists of a Keplerian disk attached to a non-rotating star. In a previous work, we found that in hydrodynamical simulations, sound waves excited by shear in the BL were able to efficiently transport angular momentum and drive mass accretion onto the star. Here we confirm that in MHD simulations, waves serve as an efficient means of angular momentum transport in the vicinity of the BL, despite the magnetorotational instability (MRI) operating in the disk. In particular, the angular momentum current due to waves is at times...
The stellar atmosphere simulation code Bifrost
Gudiksen, Boris V; Hansteen, Viggo H; Hayek, Wolfgang; Leenaarts, Jorrit; Martínez-Sykora, Juan
2011-01-01
Context: Numerical simulations of stellar convection and photospheres have been developed to the point where detailed shapes of observed spectral lines can be explained. Stellar atmospheres are very complex, and very different physical regimes are present in the convection zone, photosphere, chromosphere, transition region and corona. To understand the details of the atmosphere it is necessary to simulate the whole atmosphere since the different layers interact strongly. These physical regimes are very diverse and it takes a highly efficient massively parallel numerical code to solve the associated equations. Aims: The design, implementation and validation of the massively parallel numerical code Bifrost for simulating stellar atmospheres from the convection zone to the corona. Methods: The code is subjected to a number of validation tests, among them the Sod shock tube test, the Orzag-Tang colliding shock test, boundary condition tests and tests of how the code treats magnetic field advection, chromospheric ...
Alignment of Velocity and Magnetic Fluctuations in Simulations of Anisotropic MHD Turbulence
Ng, C. S.; Bhattacharjee, A.
2007-11-01
There has been recent theoretical interest in the effect of the alignment of velocity and magnetic fluctuations in three-dimensional (3D) MHD turbulence with a large-scale magnetic field [Boldyrev 2005, 2006]. This theory predicts that the angle θ between the velocity and magnetic fluctuation vectors has a scaling of θ&1/4circ;, where λ is the spatial scale of the fluctuations. There have also been simulations on 3D forced MHD turbulence that supports this prediction [Mason et al. 2006, 2007]. The scaling has also been tested against observations of solar wind turbulence [Podesta et al. 2007]. We report here simulation results based on decaying 2D turbulence. The scaling of θ&1/4circ; and Iroshnikov-Kraichnan scaling has also been observed within a range of time interval and spatial scales, despite the fact that Boldyrev's theory was developed for fully 3D turbulence in the presence of a strong external field. As the external field is reduced in magnitude and becomes comparable to the magnitude of magnetic fluctuations or lower, the scale-dependent alignment is weakened. Implications for observations of solar wind turbulence will be discussed.
FLASH MHD simulations of experiments that study shock-generated magnetic fields
Tzeferacos, P.; Fatenejad, M.; Flocke, N.; Graziani, C.; Gregori, G.; Lamb, D. Q.; Lee, D.; Meinecke, J.; Scopatz, A.; Weide, K.
2015-12-01
We summarize recent additions and improvements to the high energy density physics capabilities in FLASH, highlighting new non-ideal magneto-hydrodynamic (MHD) capabilities. We then describe 3D Cartesian and 2D cylindrical FLASH MHD simulations that have helped to design and analyze experiments conducted at the Vulcan laser facility. In these experiments, a laser illuminates a carbon rod target placed in a gas-filled chamber. A magnetic field diagnostic (called a Bdot) employing three very small induction coils is used to measure all three components of the magnetic field at a chosen point in space. The simulations have revealed that many fascinating physical processes occur in the experiments. These include megagauss magnetic fields generated by the interaction of the laser with the target via the Biermann battery mechanism, which are advected outward by the vaporized target material but decrease in strength due to expansion and resistivity; magnetic fields generated by an outward expanding shock via the Biermann battery mechanism; and a breakout shock that overtakes the first wave, the contact discontinuity between the target material and the gas, and then the initial expanding shock. Finally, we discuss the validation and predictive science we have done for this experiment with FLASH.
Chatterjee, Dipankar; Amiroudine, Sakir
2011-02-01
A comprehensive non-isothermal Lattice Boltzmann (LB) algorithm is proposed in this article to simulate the thermofluidic transport phenomena encountered in a direct-current (DC) magnetohydrodynamic (MHD) micropump. Inside the pump, an electrically conducting fluid is transported through the microchannel by the action of an electromagnetic Lorentz force evolved out as a consequence of the interaction between applied electric and magnetic fields. The fluid flow and thermal characteristics of the MHD micropump depend on several factors such as the channel geometry, electromagnetic field strength and electrical property of the conducting fluid. An involved analysis is carried out following the LB technique to understand the significant influences of the aforementioned controlling parameters on the overall transport phenomena. In the LB framework, the hydrodynamics is simulated by a distribution function, which obeys a single scalar kinetic equation associated with an externally imposed electromagnetic force field. The thermal history is monitored by a separate temperature distribution function through another scalar kinetic equation incorporating the Joule heating effect. Agreement with analytical, experimental and other available numerical results is found to be quantitative.
Zhang, Haocheng; Li, Hui; Taylor, Gregory B.
2017-08-01
In addition to multiwavelength variability, blazar polarization signatures are highly variable. Optical polarimetry has shown two distinct features: first, in both quiescent and flaring states, blazar polarization degree generally stays around 10% to 30%; second, after major polarization variations, such as polarization angle swings, the polarization degree quickly restores to its initial state. We have performed integrated relativistic magnetohydrodynamic (MHD) + radiation and polarization simulations of the blazar emission region. Our approach evolves the magnetic fields and flows using the first principles, so we can calculate the spatial and temporal dependent polarization signatures and compare them with observations.Our results show that the above two observational trends indicate the blazar flaring region should be strongly magnetized with the magnetic energy density higher than the plasma rest mass energy density. In such an environment, the 3D kink instability may trigger magnetic reconnection to accelerate particles and give rise to flares. In view of future high-energy polarimetry, this integrated MHD+polarization simulation technique will deliver new constraints on jet’s physical conditions and particle acceleration mechanisms.
HIDENEK: An implicit particle simulation of kinetic-MHD phenomena in three-dimensional plasmas
Tanaka, Motohiko
1993-05-01
An advanced 'kinetic-MHD' simulation method and its applications to plasma physics are given in this lecture. This method is quite stable for studying strong nonlinear, kinetic processes associated with large space-scale, low-frequency electromagnetic phenomena of plasmas. A full set of the Maxwell equations, and the Newton-Lorentz equations of motion for particle ions and guiding-center electrons are adopted. In order to retain only the low-frquency waves and instabilities, implicit particle-field equations are derived. The present implicit-particle method is proved to reproduce the MHD eigenmodes such as Alfven, magnetosonic and kinetic Alfven waves in a thermally near-equilibrium plasma. In the second part of the lecture, several physics applications are shown. These include not only the growth of the instabilities of beam ions against the background plasmas and helical link of the current, but they also demonstrate nonlinear results such as pitch-angle scattering of the ions. Recent progress in the simulation of the Kelvin-Helmholtz instability is also presented with a special emphasis on the mixing of the plasma particles.
MHD simulations of Plasma Jets and Plasma-surface interactions in Coaxial Plasma Accelerators
Subramaniam, Vivek; Raja, Laxminarayan
2016-10-01
Coaxial plasma accelerators belong to a class of electromagnetic acceleration devices which utilize a self-induced Lorentz force to accelerate magnetized thermal plasma to large velocities ( 40 Km/s). The plasma jet generated as a result, due to its high energy density, can be used to mimic the plasma-surface interactions at the walls of thermonuclear fusion reactors during an Edge Localized Mode (ELM) disruption event. We present the development of a Magnetohydrodynamics (MHD) simulation tool to describe the plasma acceleration and jet formation processes in coaxial plasma accelerators. The MHD model is used to study the plasma-surface impact interaction generated by the impingement of the jet on a target material plate. The study will characterize the extreme conditions generated on the target material surface by resolving the magnetized shock boundary layer interaction and the viscous/thermal diffusion effects. Additionally, since the plasma accelerator is operated in vacuum conditions, a novel plasma-vacuum interface tracking algorithm is developed to simulate the expansion of the high density plasma into a vacuum background in a physically consistent manner.
Benyo, Theresa L.
2011-01-01
Flow matching has been successfully achieved for an MHD energy bypass system on a supersonic turbojet engine. The Numerical Propulsion System Simulation (NPSS) environment helped perform a thermodynamic cycle analysis to properly match the flows from an inlet employing a MHD energy bypass system (consisting of an MHD generator and MHD accelerator) on a supersonic turbojet engine. Working with various operating conditions (such as the applied magnetic field, MHD generator length and flow conductivity), interfacing studies were conducted between the MHD generator, the turbojet engine, and the MHD accelerator. This paper briefly describes the NPSS environment used in this analysis. This paper further describes the analysis of a supersonic turbojet engine with an MHD generator/accelerator energy bypass system. Results from this study have shown that using MHD energy bypass in the flow path of a supersonic turbojet engine increases the useful Mach number operating range from 0 to 3.0 Mach (not using MHD) to a range of 0 to 7.0 Mach with specific net thrust range of 740 N-s/kg (at ambient Mach = 3.25) to 70 N-s/kg (at ambient Mach = 7). These results were achieved with an applied magnetic field of 2.5 Tesla and conductivity levels in a range from 2 mhos/m (ambient Mach = 7) to 5.5 mhos/m (ambient Mach = 3.5) for an MHD generator length of 3 m.
Three Dimensional MHD Simulation of Circumbinary Accretion Disks -2. Net Accretion Rate
Shi, Ji-Ming
2015-01-01
When an accretion disk surrounds a binary rotating in the same sense, the binary exerts strong torques on the gas. Analytic work in the 1D approximation indicated that these torques sharply diminish or even eliminate accretion from the disk onto the binary. However, recent 2D and 3D simulational work has shown at most modest diminution. We present new MHD simulations demonstrating that for binaries with mass ratios of 1 and 0.1 there is essentially no difference between the accretion rate at large radius in the disk and the accretion rate onto the binary. To resolve the discrepancy with earlier analytic estimates, we identify the small subset of gas trajectories traveling from the inner edge of the disk to the binary and show how the full accretion rate is concentrated onto them.
Murphy, G C; Pelletier, Guy
2008-01-01
Magnetic reconnection plays a critical role in many astrophysical processes where high energy emission is observed, e.g. particle acceleration, relativistic accretion powered outflows, pulsar winds and probably in dissipation of Poynting flux in GRBs. The magnetic field acts as a reservoir of energy and can dissipate its energy to thermal and kinetic energy via the tearing mode instability. We have performed 3d nonlinear MHD simulations of the tearing mode instability in a current sheet. Results from a temporal stability analysis in both the linear regime and weakly nonlinear (Rutherford) regime are compared to the numerical simulations. We observe magnetic island formation, island merging and oscillation once the instability has saturated. The growth in the linear regime is exponential in agreement with linear theory. In the second, Rutherford regime the island width grows linearly with time. We find that thermal energy produced in the current sheet strongly dominates the kinetic energy. Finally preliminary ...
Investigating Magnetic Activity in the Galactic Centre by Global MHD Simulation
Suzuki, Takeru K; Torii, Kazufumi; Machida, Mami; Matsumoto, Ryoji; Kakiuchi, Kensuke
2016-01-01
By performing a global magnetohydrodynamical (MHD) simulation for the Milky Way with an axisymmetric gravitational potential, we propose that spatially dependent amplification of magnetic fields possibly explains the observed noncircular motion of the gas in the Galactic centre (GC) region. The radial distribution of the rotation frequency in the bulge region is not monotonic in general. The amplification of the magnetic field is enhanced in regions with stronger differential rotation, because magnetorotational instability and field-line stretching are more effective. The strength of the amplified magnetic field reaches >~ 0.5 mG, and radial flows of the gas are excited by the inhomogeneous transport of angular momentum through turbulent magnetic field that is amplified in a spatially dependent manner. As a result, the simulated position-velocity diagram exhibits a time-dependent asymmetric parallelogram-shape owing to the intermittency of the magnetic turbulence; the present model provides a viable alternati...
Batet, L.; Mas de les Valls, E.; Sedano, L. A.
2012-07-01
In the context of regenerating sheaths for fusion reactors, the CFD simulations of liquid metal channels (ML) are essential to know the phenomenology and obtain relevant information for design as: ML thermal gain, to know the thermal efficiency of the component, existence of hot spots, to define the materials to use, existence of flow inversion, etc. Apart from design parameters there are others, bridge parameter, required as inputs into system code. In this work shown GREENER/T4F capabilities for obtaining both parameters with a CFD tool based on open source OpenFOAM.
Three-dimensional MHD simulation for the solar wind structure observed by Ulysses
无
2001-01-01
Ulysses has been the first spacecraft to explore the high latitudinal regions of the heliosphere till now. During its first rapid pole-to-pole transit from September 1994to June 1995, Ulysses observed a fast speed flow with magnitude reaching 700-800 km/s at high latitudinal region except + 20° area near the ecliptic plane where the velocity is 300-400 km/s. The observations also showed a sudden jump of the velocity across the two regions. In this note,based on the characteristic and representative observations of the solar magnetic field and K-coronal polarized brightness, the large-scale solar wind structure mentioned above is reproduced by using a three-dimensional MHD model. The numerical results are basically consistent with those of Ulysses observations. Our results also show that the distributions of magnetic field and plasma number density on the solar source surface play an important role in governing this structure. Furthermore, the three-dimensional MHD model used here has a robust ability to simulate this kind of large-scale wind structure.
Sub-Alfvenic Non-Ideal MHD Turbulence Simulations with Ambipolar Diffusion: I. Turbulence Statistics
Klein, R I; Li, P S; McKee, C F; Fisher, R
2008-04-10
Most numerical investigations on the role of magnetic fields in turbulent molecular clouds (MCs) are based on ideal magneto-hydrodynamics (MHD). However, MCs are weakly ionized, so that the time scale required for the magnetic field to diffuse through the neutral component of the plasma by ambipolar diffusion (AD) can be comparable to the dynamical time scale. We have performed a series of 256{sup 3} and 512{sup 3} simulations on supersonic but sub-Alfvenic turbulent systems with AD using the Heavy-Ion Approximation developed in Li et al. (2006). Our calculations are based on the assumption that the number of ions is conserved, but we show that these results approximately apply to the case of time-dependent ionization in molecular clouds as well. Convergence studies allow us to determine the optimal value of the ionization mass fraction when using the heavy-ion approximation for low Mach number, sub-Alfvenic turbulent systems. We find that ambipolar diffusion steepens the velocity and magnetic power spectra compared to the ideal MHD case. Changes in the density PDF, total magnetic energy, and ionization fraction are determined as a function of the AD Reynolds number. The power spectra for the neutral gas properties of a strongly magnetized medium with a low AD Reynolds number are similar to those for a weakly magnetized medium; in particular, the power spectrum of the neutral velocity is close to that for Burgers turbulence.
Kanki, Takashi; Nagata, Masayoshi; Kagei, Yasuhiro
2011-10-01
The dynamics of structures of magnetic field, current density, and plasma flow generated during multi-pulsed coaxial helicity injection in spherical torus is investigated by 3-D nonlinear MHD simulations. During the driven phase, the flux and current amplifications occur due to the merging and magnetic reconnection between the preexisting plasma in the confinement region and the ejected plasma from the gun region involving the n = 1 helical kink distortion of the central open flux column (COFC). Interestingly, the diamagnetic poloidal flow which tends toward the gun region is then observed due to the steep pressure gradients of the COFC generated by ohmic heating through an injection current winding around the inboard field lines, resulting in the formation of the strong poloidal flow shear at the interface between the COFC and the core region. This result is consistent with the flow shear observed in the HIST. During the decay phase, the configuration approaches the axisymmetric MHD equilibrium state without flow because of the dissipation of magnetic fluctuation energy to increase the closed flux surfaces, suggesting the generation of ordered magnetic field structure. The parallel current density λ concentrated in the COFC then diffuses to the core region so as to reduce the gradient in λ, relaxing in the direction of the Taylor state.
Hoelzl, M.; Huijsmans, G. T. A.; Merkel, P.; Atanasiu, C.; Lackner, K.; Nardon, E.; Aleynikova, K.; Liu, F.; Strumberger, E.; McAdams, R.; Chapman, I.; Fil, A.
2014-11-01
The dynamics of large scale plasma instabilities can be strongly influenced by the mutual interaction with currents flowing in conducting vessel structures. Especially eddy currents caused by time-varying magnetic perturbations and halo currents flowing directly from the plasma into the walls are important. The relevance of a resistive wall model is directly evident for Resistive Wall Modes (RWMs) or Vertical Displacement Events (VDEs). However, also the linear and non-linear properties of most other large-scale instabilities may be influenced significantly by the interaction with currents in conducting structures near the plasma. The understanding of halo currents arising during disruptions and VDEs, which are a serious concern for ITER as they may lead to strong asymmetric forces on vessel structures, could also benefit strongly from these non-linear modeling capabilities. Modeling the plasma dynamics and its interaction with wall currents requires solving the magneto-hydrodynamic (MHD) equations in realistic toroidal X-point geometry consistently coupled with a model for the vacuum region and the resistive conducting structures. With this in mind, the non-linear finite element MHD code JOREK [1, 2] has been coupled [3] with the resistive wall code STARWALL [4], which allows us to include the effects of eddy currents in 3D conducting structures in non-linear MHD simulations. This article summarizes the capabilities of the coupled JOREK-STARWALL system and presents benchmark results as well as first applications to non-linear simulations of RWMs, VDEs, disruptions triggered by massive gas injection, and Quiescent H-Mode. As an outlook, the perspectives for extending the model to halo currents are described.
Akcay, Cihan
A comparative study of 3-D pressureless resistive (single-fluid) magnetohydrodynamic (rMHD) and 3-D pressureless two-fluid magnetohydrodynamic (2fl-MHD) models of the Helicity Injected Torus experiment (HIT-SI) is presented. HIT-SI is a spheromak current-drive experiment that uses two geometrically asymmetric helicity injectors to generate and sustain toroidal plasmas. The goal of the experiment is to demonstrate that steady inductive helicity injection (SIHI) is a viable method for driving and sustaining a magnetized plasma for the eventual purpose of electricity production with magnetic fusion power. The experiment has achieved sustainment of nearly 100 kA of plasma current for ˜1~ms. Fusion power plants are expected to sustain a burning plasma for many minutes to hours with more than 10~MA of plasma current. The purpose of project is to determine the validity of the single-fluid and two-fluid MHD models of HIT-SI. The comparable size of the collisionless ion skin depth to the diameter of the injectors and resistive skin depth predicates the importance of two-fluid effects. The simulations are run with NIMROD (non-ideal magnetohydrodynamics code with rotation-open discussion), an initial-value, 3-D extended MHD code. A constant and uniform plasma density and temperature are assumed. The helicity injectors are modeled as oscillating normal magnetic and parallel electric field boundary conditions. The simulations use parameters that closely match those of the experiment. The simulation output is compared to the formation time, plasma current, and internal and surface magnetic fields. Results of the study indicate 2fl-MHD shows quantitative agreement with the experiment while rMHD only captures the qualitative features. The validity of each model is assessed based on how accurately it reproduces the global quantities as well as the temporal and spatial dependence of the measured magnetic fields. 2fl-MHD produces the current amplification and formation time
Benyo, Theresa L.
2010-01-01
Preliminary flow matching has been demonstrated for a MHD energy bypass system on a supersonic turbojet engine. The Numerical Propulsion System Simulation (NPSS) environment was used to perform a thermodynamic cycle analysis to properly match the flows from an inlet to a MHD generator and from the exit of a supersonic turbojet to a MHD accelerator. Working with various operating conditions such as the enthalpy extraction ratio and isentropic efficiency of the MHD generator and MHD accelerator, interfacing studies were conducted between the pre-ionizers, the MHD generator, the turbojet engine, and the MHD accelerator. This paper briefly describes the NPSS environment used in this analysis and describes the NPSS analysis of a supersonic turbojet engine with a MHD generator/accelerator energy bypass system. Results from this study have shown that using MHD energy bypass in the flow path of a supersonic turbojet engine increases the useful Mach number operating range from 0 to 3.0 Mach (not using MHD) to an explored and desired range of 0 to 7.0 Mach.
Bierwage, Andreas; Spong, Donald A.
2009-05-01
Hybrid-MHD-Gyrokinetic Code (HMGC) [1] and the gyrofluid code TAEFL [2,3] are used for nonlinear simulation of Alfven Eigenmodes in Tokamak plasma. We compare results obtained in two cases: (I) a case designed for cross-code benchmark of TAE excitation; (II) a case based on a dedicated DIII-D shot #132707 where RSAE and TAE activity is observed. Differences between the numerical simulation results are discussed and future directions are outlined. [1] S. Briguglio, G. Vlad, F. Zonca and C. Kar, Phys. Plasmas 2 (1995) 3711. [2] D.A. Spong, B.A. Carreras and C.L. Hedrick, Phys. Fluids B4 (1992) 3316. [3] D.A. Spong, B.A. Carreras and C.L. Hedrick, Phys. Plasmas 1 (1994) 1503.
Self-organisation in protoplanetary disks: global, non-stratified Hall-MHD simulations
Béthune, William; Ferreira, Jonathan
2016-01-01
Recent observations revealed organised structures in protoplanetary disks, such as axisymmetric rings or horseshoe concen- trations evocative of large-scale vortices. These structures are often interpreted as the result of planet-disc interactions. However, these disks are also known to be unstable to the magneto-rotational instability (MRI) which is believed to be one of the dominant angular momentum transport mechanism in these objects. It is therefore natural to ask if the MRI itself could produce these structures without invoking planets. The nonlinear evolution of the MRI is strongly affected by the low ionisation fraction in protoplanetary disks. The Hall effect in particular, which is dominant in dense and weakly ionised parts of these objects, has been shown to spontaneously drive self- organising flows in shearing box simulations. Here, we investigate the behaviour of global MRI-unstable disc models dominated by the Hall effect and characterise their dynamics. We perform 3D unstratified Hall-MHD simu...
Unstable Disk Accretion to Magnetized Stars: First Global 3D MHD Simulations
Romanova, Marina M; Lovelace, Richard V E
2007-01-01
We report the first global three-dimensional (3D) MHD simulations of disk accretion onto a rotating magnetized star through the Rayleigh-Taylor instability. In this regime, the accreting matter typically forms 2 to 7 vertically elongated "tongues" which penetrate deep into the magnetosphere, until they are stopped by the strong field. Subsequently, the matter is channeled along the field lines to the surface of the star, forming hot spots. The number, position and shape of the hot spots vary with time, so that the light-curves associated with the hot spots are stochastic. A magnetized star may be in the stable (with funnel streams) or unstable (with random tongues) regime of accretion, and consequently have significantly different observational properties. A star may switch between these two regimes depending on the accretion rate.
Testa, Paola; Martinez-Sykora, Juan; Hansteen, Viggo; Carlsson, Mats
2012-01-01
Determining the temperature distribution of coronal plasmas can provide stringent constraints on coronal heating. Current observations with the Extreme ultraviolet Imaging Spectrograph onboard Hinode and the Atmospheric Imaging Assembly onboard the Solar Dynamics Observatory provide diagnostics of the emission measure distribution (EMD) of the coronal plasma. Here we test the reliability of temperature diagnostics using 3D radiative MHD simulations. We produce synthetic observables from the models, and apply the Monte Carlo Markov chain EMD diagnostic. By comparing the derived EMDs with the "true" distributions from the model we assess the limitations of the diagnostics, as a function of the plasma parameters and of the signal-to-noise of the data. We find that EMDs derived from EIS synthetic data reproduce some general characteristics of the true distributions, but usually show differences from the true EMDs that are much larger than the estimated uncertainties suggest, especially when structures with signif...
3D-MHD simulations of the evolution of magnetic fields in FR II radio sources
Huarte-Espinosa, Martin; Alexander, Paul
2010-01-01
3D-MHD numerical simulations of bipolar, hypersonic, weakly magnetized jets and synthetic synchrotron observations are presented to study the structure and evolution of magnetic fields in FR II radio sources. The magnetic field setup in the jet is initially random. The power of the jets as well as the observational viewing angle are investigated. We find that synthetic polarization maps agree with observations and show that magnetic fields inside the sources are shaped by the jets' backflow. Polarimetry statistics correlates with time, the viewing angle and the jet-to-ambient density contrast. The magnetic structure inside thin elongated sources is more uniform than for ones with fatter cocoons. Jets increase the magnetic energy in cocoons, in proportion to the jet velocity. Both, filaments in synthetic emission maps and 3D magnetic power spectra suggest that turbulence develops in evolved sources.
Boss, A P
2014-01-01
We present the results of a large suite of three-dimensional (3D) models of the collapse of magnetic molecular cloud cores using the adaptive mesh refinement (AMR) code Enzo2.2 in the ideal magnetohydrodynamics (MHD) approximation. The cloud cores are initially either prolate or oblate, centrally condensed clouds with masses of 1.73 or 2.73 $M_\\odot$, respectively. The radial density profiles are Gaussian, with central densities 20 times higher than boundary densities. A barotropic equation of state is used to represent the transition from low density, isothermal phases, to high density, optically thick phases. The initial magnetic field strength ranges from 6.3 to 100 $\\mu$G, corresponding to clouds that are strongly to marginally supercritical, respectively, in terms of the mass to magnetic flux ratio. The magnetic field is initially uniform and aligned with the clouds' rotation axes, with initial ratios of rotational to gravitational energy ranging from $10^{-4}$ to 0.1. Two significantly different outcome...
Fast Ion Effects on Fishbones and n=1 Kinks in JET Simulated by a Non-perturbative NOVA-KN Code
N.N. Gorelenkov; C.Z. Cheng; V.G. Kiptily; M.J. Mantsinen; S.E. Sharapov; the JET-EFDA Contributors
2004-10-28
New global non-perturbative hybrid code, NOVA-KN, and simulations of resonant type modes in JET [Joint European Torus] plasmas driven by energetic H-minority ions are presented. The NOVA-KN code employs the ideal-MHD description for the background plasma and treats non-perturbatively the fast particle kinetic response, which includes the fast ion finite orbit width (FOW) effect. In particular, the n = 1 fishbone mode, which is in precession drift resonance with fast ions, is studied. The NOVA-KN code is applied to model an n = 1 (f = 50-80kHz) MHD activity observed recently in JET low density plasma discharges with high fast ion (H-minority) energy content generated during the ion cyclotron resonance heating (ICRH). This n = 1 MHD activity is interpreted as the instability of the n = 1 precession drift frequency fishbone modes.
Simulation of EAST vertical displacement events by tokamak simulation code
Qiu, Qinglai; Xiao, Bingjia; Guo, Yong; Liu, Lei; Xing, Zhe; Humphreys, D. A.
2016-10-01
Vertical instability is a potentially serious hazard for elongated plasma. In this paper, the tokamak simulation code (TSC) is used to simulate vertical displacement events (VDE) on the experimental advanced superconducting tokamak (EAST). Key parameters from simulations, including plasma current, plasma shape and position, flux contours and magnetic measurements match experimental data well. The growth rates simulated by TSC are in good agreement with TokSys results. In addition to modeling the free drift, an EAST fast vertical control model enables TSC to simulate the course of VDE recovery. The trajectories of the plasma current center and control currents on internal coils (IC) fit experimental data well.
Data-driven MHD simulation of a solar eruption observed in NOAA Active Region 12158
Lee, Hwanhee; Magara, Tetsuya; Kang, Jihye
2017-08-01
We present a data-driven magnetohydrodynamic (MHD) simulation of a solar eruption where the dynamics of a background solar wind is incorporated. The background solar wind exists in the real solar atmosphere, which continuously transports magnetized plasma toward the interplanetary space. This suggests that it may play a role in producing a solar eruption. We perform a simulation for NOAA AR 12158 accompanied with X1.6-class flare and CME on 2014 September 10. We construct a magnetohydrostatic state used as the initial state of data-driven simulation, which is composed of a nonlinear force-free field (NLFFF) derived from observation data of photospheric vector magnetic field and a hydrostatic atmosphere with prescribed distributions of temperature and gravity. We then reduce the gas pressure well above the solar surface to drive a solar wind. As a result, a magnetic field gradually evolves during an early phase, and eventually eruption is observed. To figure out what causes the transition from gradual evolution to eruption, we analyze the temporal development of force distribution and geometrical shape of magnetic field lines. The result suggests that the curvature and the scale height of a coronal magnetic field play an important role in determining its dynamic state.
Flux Emergence In The Solar Photosphere - Diagnostics Based On 3-D Rradiation-MHD Simulations
Yelles Chaouche, L.; Cheung, M.; Lagg, A.; Solanki, S.
2006-08-01
We investigate flux tube emergence in the solar photosphere using a diagnostic procedure based on analyzing Stokes signals from different spectral lines calculated in 3-D radiation-MHD simulations. The simulations include the effects of radiative transport and partial ionization and cover layers both above and below the solar surface. The simulations consider the emergence of a twisted magnetic flux tube through the solar surface. We consider different stages in the emergence process, starting from the early appearance of the flux tube at the solar surface, and following the emergence process until the emerged flux looks similar to a normal bipolar region. At every stage we compute line profiles by numerically solving the Unno-Rachkovsky equations at every horizontal grid point. Then, following observational practice, we apply Milne-Eddington-type inversions to the synthetic spectra in order to retrieve different atmospheric parameters. We include the influence of spatial smearing on the deduced atmospheric parameters to identify signatures of different stages of flux emergence in the solar photosphere.
Time-dependent simulation of oblique MHD cosmic-ray shocks using the two-fluid model
Frank, Adam; Jones, T. W.; Ryu, Dongsu
1995-01-01
Using a new, second-order accurate numerical method we present dynamical simulations of oblique MHD cosmic-ray (CR)-modified plane shock evolution. Most of the calculations are done with a two-fluid model for diffusive shock acceleration, but we provide also comparisons between a typical shock computed that way against calculations carried out using the more complete, momentum-dependent, diffusion-advection equation. We also illustrate a test showing that these simulations evolve to dynamical equilibria consistent with previously published steady state analytic calculations for such shocks. In order to improve understanding of the dynamical role of magnetic fields in shocks modified by CR pressure we have explored for time asymptotic states the parameter space of upstream fast mode Mach number, M(sub f), and plasma beta. We compile the results into maps of dynamical steady state CR acceleration efficiency, epsilon(sub c). We have run simulations using constant, and nonisotropic, obliquity (and hence spatially) dependent forms of the diffusion coefficient kappa. Comparison of the results shows that while the final steady states achieved are the same in each case, the history of CR-MHD shocks can be strongly modified by variations in kappa and, therefore, in the acceleration timescale. Also, the coupling of CR and MHD in low beta, oblique shocks substantially influences the transient density spike that forms in strongly CR-modified shocks. We find that inside the density spike a MHD slow mode wave can be generated that eventually steepens into a shock. A strong layer develops within the density spike, driven by MHD stresses. We conjecture that currents in the shear layer could, in nonplanar flows, results in enhanced particle accretion through drift acceleration.
Stil, J M; Ouyed, R; Taylor, A R
2008-01-01
We present three-dimensional magnetohydrodynamic (MHD) simulations of superbubbles, to study the importance of MHD effects in the interpretation of images from recent surveys of the Galactic plane. These simulations focus mainly on atmospheres defined by an exponential density distribution and the Dickey & Lockman (1990) density distribution. In each case, the magnetic field is parallel to the Galactic plane and we investigate cases with either infinite scale height (constant magnetic field) or a constant ratio of gas pressure to magnetic pressure. The three-dimensional structure of superbubbles in these simulations is discussed with emphasis on the axial ratio of the cavity as a function of magnetic field strength and the age of the bubble. We investigate systematic errors in the age of the bubble and scale height of the surrounding medium that may be introduced by modeling the data with purely hydrodynamic models. Age estimates derived with symmetric hydrodynamic models fitted to an asymmetric magnetize...
MHD Simulations of the ISM: The Importance of the Galactic Magnetic Field on the ISM "Phases"
D'Avillez, M A
2003-01-01
We have carried out 1.25 pc resolution MHD simulations of the ISM, on a Cartesian grid of $0 \\leq (x,y) \\leq 1$ kpc size in the galactic plane and $-10 \\leq z \\leq 10$ kpc into the halo, thus being able to fully trace the time-dependent evolution of the galactic fountain. The simulations show that large scale gas streams emerge, driven by SN explosions, which are responsible for the formation and destruction of shocked compressed layers. The shocked gas can have densities as high as 800 cm$^{-3}$ and lifetimes up to 15 Myr. The cold gas is distributed into filaments which tend to show a preferred orientation due to the anisotropy of the flow induced by the galactic magnetic field. Ram pressure dominates the flow in the unstable branch $10^{2}<$T$\\leq 10^{3.9}$ K, while for T$\\leq 100$ K (stable branch) magnetic pressure takes over. Near supernovae thermal and ram pressures determine the dynamics of the flow. Up to 80% of the mass in the disk is concentrated in the thermally unstable regime $10^{2}<$T$\\l...
Investigating Magnetic Activity in the Galactic Centre by Global MHD Simulation
Suzuki, Takeru K.; Fukui, Yasuo; Torii, Kazufumi; Machida, Mami; Matsumoto, Ryoji; Kakiuchi, Kensuke
2017-01-01
By performing a global magnetohydrodynamical (MHD) simulation for the Milky Way with an axisymmetric gravitational potential, we propose that spatially dependent amplification of magnetic fields possibly explains the observed noncircular motion of the gas in the Galactic centre (GC) region. The radial distribution of the rotation frequency in the bulge region is not monotonic in general. The amplification of the magnetic field is enhanced in regions with stronger differential rotation, because magnetorotational instability and field-line stretching are more effective. The strength of the amplified magnetic field reaches >~ 0.5 mG, and radial flows of the gas are excited by the inhomogeneous transport of angular momentum through turbulent magnetic field that is amplified in a spatially dependent manner. As a result, the simulated position-velocity diagram exhibits a time-dependent asymmetric parallelogram-shape owing to the intermittency of the magnetic turbulence; the present model provides a viable alternative to the bar-potential-driven model for the parallelogram shape of the central molecular zone. In addition, Parker instability (magnetic buoyancy) creates vertical magnetic structure, which would correspond to observed molecular loops, and frequently excited vertical flows. Furthermore, the time-averaged net gas flow is directed outward, whereas the flows are highly time dependent, which would contribute to the outflow from the bulge.
MHD simulations of protostellar jets: formation and stability of shock diamonds
Ustamujic, Sabina
2016-07-01
The early stages of a star birth are characterised by a variety of mass ejection phenomena, including outflows and collimated jets, that are strongly related with the accretion process developed in the context of the star-disc interaction. After been ejected, jets move through the ambient medium, interacting and producing shocks and complex structures that are observed at different wavelength bands. In particular, X-ray observations show evidence of strong shocks heating the plasma up to temperatures of a few million degrees. In some cases, the shocked features appear to be stationary and have been interpreted as shock diamonds. We aim at investigating the physical properties of the shocked plasma and the role of the magnetic field on the collimation performing 2.5D MHD simulations, including the effects of the thermal conduction and the radiative losses. We modelled the propagation of a jet ramming with a supersonic speed into an initially isothermal and homogeneous magnetized medium. We studied the physics that guides the formation of a stationary shock (for instance a shock diamond) and compared the results with observations, via the emission measure distribution vs. temperature and the luminosity synthesised from the simulations.
Keppens, R
2002-01-01
We present numerical magnetohydrodynamic (MHD) simulations of a magnetized accretion disk launching trans-Alfvenic jets. These simulations, performed in a 2.5 dimensional time-dependent polytropic resistive MHD framework, model a resistive accretion disk threaded by an initial vertical magnetic field. The resistivity is only important inside the disk, and is prescribed as eta = alpha_m V_AH exp(-2Z^2/H^2), where V_A stands for Alfven speed, H is the disk scale height and the coefficient alpha_m is smaller than unity. By performing the simulations over several tens of dynamical disk timescales, we show that the launching of a collimated outflow occurs self-consistently and the ejection of matter is continuous and quasi-stationary. These are the first ever simulations of resistive accretion disks launching non-transient ideal MHD jets. Roughly 15% of accreted mass is persistently ejected. This outflow is safely characterized as a jet since the flow becomes super-fastmagnetosonic, well-collimated and reaches a q...
Fully Parallel MHD Stability Analysis Tool
Svidzinski, Vladimir; Galkin, Sergei; Kim, Jin-Soo; Liu, Yueqiang
2015-11-01
Progress on full parallelization of the plasma stability code MARS will be reported. MARS calculates eigenmodes in 2D axisymmetric toroidal equilibria in MHD-kinetic plasma models. It is a powerful tool for studying MHD and MHD-kinetic instabilities and it is widely used by fusion community. Parallel version of MARS is intended for simulations on local parallel clusters. It will be an efficient tool for simulation of MHD instabilities with low, intermediate and high toroidal mode numbers within both fluid and kinetic plasma models, already implemented in MARS. Parallelization of the code includes parallelization of the construction of the matrix for the eigenvalue problem and parallelization of the inverse iterations algorithm, implemented in MARS for the solution of the formulated eigenvalue problem. Construction of the matrix is parallelized by distributing the load among processors assigned to different magnetic surfaces. Parallelization of the solution of the eigenvalue problem is made by repeating steps of the present MARS algorithm using parallel libraries and procedures. Results of MARS parallelization and of the development of a new fix boundary equilibrium code adapted for MARS input will be reported. Work is supported by the U.S. DOE SBIR program.
Proceedings of the workshop on nonlinear MHD and extended MHD
NONE
1998-12-01
Nonlinear MHD simulations have proven their value in interpreting experimental results over the years. As magnetic fusion experiments reach higher performance regimes, more sophisticated experimental diagnostics coupled with ever expanding computer capabilities have increased both the need for and the feasibility of nonlinear global simulations using models more realistic than regular ideal and resistive MHD. Such extended-MHD nonlinear simulations have already begun to produce useful results. These studies are expected to lead to ever more comprehensive simulation models in the future and to play a vital role in fully understanding fusion plasmas. Topics include the following: (1) current state of nonlinear MHD and extended-MHD simulations; (2) comparisons to experimental data; (3) discussions between experimentalists and theorists; (4) /equations for extended-MHD models, kinetic-based closures; and (5) paths toward more comprehensive simulation models, etc. Selected papers have been indexed separately for inclusion in the Energy Science and Technology Database.
无
2009-01-01
An asynchronous and parallel time-marching method for three-dimensional (3D) time-dependent magnetohydrodynamic (MHD) simulation is used for large-scale solar wind simulation. It uses different local time steps in the corona and the heliosphere according to the local Courant-Friedrichs-Levy (CFL) conditions. The solar wind background with observed solar photospheric magnetic field as input is first presented. The simulation time for the background solar wind by using the asynchronous method is <1/6 of that by using the normal synchronous time-marching method with the same computation precision. Then, we choose the coronal mass ejection (CME) event of 13 November, 2003 as a test case. The time-dependent variations of the pressure and the velocity configured from a CME model at the inner boundary are applied to generate transient structures in order to study the dynamical interaction of a CME with the background solar wind flow between 1 and 230 Rs. This time-marching method is very effective in terms of computation time for large-scale 3D time-dependent numerical MHD problem. In this validation study, we find that this 3D MHD model, with the asynchronous and parallel time-marching method, provides a relatively satisfactory comparison with the ACE spacecraft obser- vations at L1 point.
ZHANG XianGuo; PU ZuYin; MA ZhiWei; ZHOU XuZhi
2008-01-01
A three-dimensional (3-D) Hall MHD simulation is carried out to study the roles of initial current carrier in the topology of magnetic field,the generation and distribuering the contribution of ions to the initial current,the topology of the obtained magnetic field turns to be more complex. In some cases,it is found that not only the traditional By quadrupole structure but also a reversal By quadrupole structure appears in the simulation box. This can explain the observational features near the diffusion region,which are inconsistent with the Hall MHD theory with the total initial current carried by electrons. Several other interesting features are also emerged. First,motions of electrons and ions are decoupled from each other in the small plasma region (Hall effect region) with a scale less than or comparable with the ion inertial length or ion skin depth di=c/ωp. In the non-Hall effect region,the global magnetic structure is shifted in +y direction under the influence of ions with initial y directional motion. However,in the Hall effect region,magnetic field lines are bent in -y direction,mainly controlled by the motion of electrons,then By is generated. Second,FACs emerge as a result of the appearance of By. Compared with the prior Hall MHD simulation results,the generated FACs shift in +y direction,
Analysis of Voyager Observed High-Energy Electron Fluxes in the Heliosheath Using MHD Simulations
Washimi, Haruichi; Webber, W. R.; Zank, Gary P.; Hu, Qiang; Florinski, Vladimir; Adams, James; Kubo, Yuki
2011-01-01
The Voyager spacecraft (V1 and V2) observed electrons of 6-14 MeV in the heliosheath which showed several incidences of flux variation relative to a background of gradually increasing flux with distance from the Sun. The increasing flux of background electrons is thought to result from inward radial diffusion. We compare the temporal electron flux variation with dynamical phenomena in the heliosheath that are obtained from our MHD simulations. Because our simulation is based on V2 observed plasma data before V2 crossed the termination shock, this analysis is effective up to late 2008, i.e., about a year after the V2-crossing, during which disturbances, driven prior to the crossing time, survived in the heliosheath. Several electron flux variations correspond to times directly associated with interplanetary shock events. One noteworthy example corresponds to various times associated with the March 2006 interplanetary shock, these being the collision with the termination shock, the passage past the V1 spacecraft, and the collision with the region near the heliopause, as identified by W.R. Webber et al. for proton/helium of 7-200 MeV. Our simulations indicate that all other electron flux variations, except one, correspond well to the times when a shock-driven magneto-sonic pulse and its reflection in the heliosheath either passed across V1/V2, or collided with the termination shock or with the plasma sheet near the heliopause. This result suggests that variation in the electron flux should be due to either direct or indirect effects of magnetosonic pulses in the heliosheath driven by interplanetary shocks
Effect of the Interplanetary Electric Field on the Magnetopause From Global MHD Simulations
HUANG Zhaohui; DING Kai; WANG Chi
2012-01-01
The north-south component B_z of the Interplanetary Magnetic Field（IMF） and solar wind dynamic pressure P_d are generally treated as the two main factors in the solar wind that determine the geometry of the magnetosphere.By using the 3D global MHD simulations,we investigate the effect of the Interplanetary Electric Field（IEF） on the size and shape of magnetopause quantitatively. Our numerical experiments confirm that the geometry of the magnetopause are mainly determined by P_d and B_z,as expected.However,the dawn-dusk IEFs have great impact on the magnetopause erosion because of the magnetic reconnection,thus affecting the size and shape of the magnetopause.Higher solar wind speed with the same B_z will lead to bigger dawn-dusk IEFs,which means the higher reconnection rate,and then results in more magnetic flux removal from the dayside. Consequently,the dayside magnetopause moves inward and flank magnetopause moves outward.
Constraints on particle acceleration sites in the Crab Nebula from relativistic MHD simulations
Olmi, Barbara; Amato, Elena; Bucciantini, Niccolò
2015-01-01
The Crab Nebula is one of the most efficient accelerators in the Galaxy and the only galactic source showing direct evidence of PeV particles. In spite of this, the physical process behind such effective acceleration is still a deep mystery. While particle acceleration, at least at the highest energies, is commonly thought to occur at the pulsar wind termination shock, the properties of the upstream flow are thought to be non-uniform along the shock surface, and important constraints on the mechanism at work come from exact knowledge of where along this surface particles are being accelerated. Here we use axisymmetric relativistic MHD simulations to obtain constraints on the acceleration site(s) of particles of different energies in the Crab Nebula. Various scenarios are considered for the injection of particles responsible for synchrotron radiation in the different frequency bands, radio, optical and X-rays. The resulting emission properties are compared with available data on the multi wavelength time varia...
Parchevsky, K; Khomenko, E; Olshevsky, V; Collados, M
2010-01-01
We present comparison of numerical simulations of propagation of MHD waves,excited by subphotospheric perturbations, in two different ("deep" and "shallow") magnetostatic models of the sunspots. The "deep" sunspot model distorts both the shape of the wavefront and its amplitude stronger than the "shallow" model. For both sunspot models, the surface gravity waves (f-mode) are affected by the sunspots stronger than the acoustic p-modes. The wave amplitude inside the sunspot depends on the photospheric strength of the magnetic field and the distance of the source from the sunspot axis. For the source located at 9 Mm from the center of the sunspot, the wave amplitude increases when the wavefront passes through the central part of the sunspot. For the source distance of 12 Mm, the wave amplitude inside the sunspot is always smaller than outside. For the same source distance from the sunspot center but for the models with different strength of the magnetic field, the wave amplitude inside the sunspot increases with...
Sub-Alfvenic Non-Ideal MHD Turbulence Simulations with Ambipolar Diffusion: I. Turbulence Statistics
Li, Pak Shing; Klein, Richard I; Fisher, Robert T
2008-01-01
Most numerical investigations on the role of magnetic fields in turbulent molecular clouds (MCs) are based on ideal magneto-hydrodynamics (MHD). However, MCs are weakly ionized, so that the time scale required for the magnetic field to diffuse through the neutral component of the plasma by ambipolar diffusion (AD) can be comparable to the dynamical time scale. We have performed a series of 256^3 and 512^3 simulations on supersonic but sub-Alfvenic turbulent systems with AD using the Heavy-Ion Approximation developed in Li, McKee, & Klein (2006). Our calculations are based on the assumption that the number of ions is conserved, but we show that these results approximately apply to the case of time-dependent ionization in molecular clouds as well. Convergence studies allow us to determine the optimal value of the ionization mass fraction when using the heavy-ion approximation for low Mach number, sub-Alfvenic turbulent systems. We find that ambipolar diffusion steepens the velocity and magnetic power spectr...
MHD simulations of near-surface convection in cool main-sequence stars
Beeck, Benjamin; Reiners, Ansgar
2014-01-01
The solar photospheric magnetic field is highly structured owing to its interaction with the convective flows. Its local structure has a strong influence on the profiles of spectral lines not only by virtue of the Zeeman effect, but also through the modification of the thermodynamical structure (e.g. line weakening in hot small-scale magnetic structures). Many stars harbor surface magnetic fields comparable to or larger than the Sun at solar maximum. Therefore, a strong influence of the field on the surface convection and on spectral line profiles can be expected. We carried out 3D local-box MHD simulations of unipolar magnetized regions (average fields of 20, 100, and 500G) with parameters corresponding to six main-sequence stars (spectral types F3V to M2V). The influence of the magnetic field on the convection and the local thermodynamical structure were analyzed in detail. For three spectral lines, we determined the impact of the magnetic field on the disc-integrated Stokes-I profiles. Line weakening has i...
Alya: Towards Exascale for Engineering Simulation Codes
Vazquez, Mariano; Koric, Seid; Artigues, Antoni; Aguado-Sierra, Jazmin; Aris, Ruth; Mira, Daniel; Calmet, Hadrien; Cucchietti, Fernando; Owen, Herbert; Taha, Ahmed; Cela, Jose Maria
2014-01-01
Alya is the BSC in-house HPC-based multi-physics simulation code. It is designed from scratch to run efficiently in parallel supercomputers, solving coupled problems. The target domain is engineering, with all its particular features: complex geome- tries and unstructured meshes, coupled multi-physics with exotic coupling schemes and Physical models, ill-posed problems, flexibility needs for rapidly including new models, etc. Since its conception in 2004, Alya has shown scaling behaviour in an increasing number of cores. In this paper, we present its performance up to 100.000 cores in Blue Waters, the NCSA supercomputer. The selected tests are representative of the engineering world, all the problematic features included: incompressible flow in a hu- man respiratory system, low Mach combustion problem in a kiln furnace and coupled electro-mechanical problem in a heart. We show scalability plots for all cases, discussing all the aspects of such kind of simulations, including solvers convergence.
Large plasmoids in global MHD simulations: Solar wind dependence and ionospheric mapping
Honkonen, Ilja; Palmroth, Minna; Pulkkinen, T.; Janhunen, Pekka
The energy from the solar wind drives magnetospheric dynamics. An important, but the most difficult to measure, factor is the energy released in plasmoids. Plasmoids are large magnetic structures that form in the Earth's magnetotail during substorms, which are the main mecha-nism of extracting and releasing solar wind energy from the magnetosphere. During plasmoid formation the 3-d structure of the magnetotail becomes complicated, with spatially alternating closed and open magnetic topologies. While the formation and the release of plasmoids are unresolved, they are classically thought to detach from the magnetotail at the substorm onset. Using our global magnetohydrodynamic (MHD) simulation GUMICS-4, we investigate how different parameters of the solar wind affect the formation of plasmoids. Specifically we con-centrate on the role of the solar wind magnetic field parameters. We also investigate the solar wind dependence of plasmoid foot points, which are the end points of the plasmoid magnetic field in the ionosphere. Preliminary results suggest that plasmoid formation and plasmoid foot point location in the ionosphere strongly depend on the solar wind magnetic field param-eters. Our work may be of importance when interpreting some observed, but unexplained, ionospheric phenomena. We also present an operational definition of plasmoids, which enables their automatic detection in simulations. The project has received funding from the European Research Council under the European Community's Seventh Framework Programme (FP7/2007-2013) / ERC Starting Grant agree-ment number 200141-QuESpace. The work of IH and MP is supported by the Academy of Finland.
Merkin, V. G.; Lyon, J.; Claudepierre, S. G.
2013-12-01
The Kelvin-Helmholtz Instability (KHI) has long been suggested to operate on the magnetospheric boundary, where the magnetosheath plasma streams past the magnetosphere. The instability is thought to be responsible for inducing various wave populations in the magnetosphere and for mass, momentum and energy transport across the magnetospheric boundary. Waves attributed to the KHI have been observed at the Earth's magnetosphere flanks as well as at Saturn and Mercury during spacecraft crossings, and remotely at boundaries of Coronal Mass Ejections (CMEs). Recent high-resolution global 3D magnetohydrodynamic (MHD) simulations of the magnetosphere confirm the existence of pronounced perturbations of the magnetospheric boundary, which are thought to be due to KHI. Such global simulations had been challenging in the past because of the need to encompass the entire magnetosphere, while sufficiently resolving the boundary layer. Here we present results of such a high-resolution simulation of the magnetosphere, using the Lyon-Fedder-Mobarry (LFM) model, under steady northward Interplanetary Magnetic Field (IMF) conditions. We find the magnetospheric boundary to be globally unstable, including the high-latitude boundary layer (meridional plane), where magnetic tension is apparently not sufficient to stabilize the growth of oscillations. Roughly beyond the terminator, global modes, coupled into the surface modes, become apparent, so that the entire body of the magnetosphere is engaged in an oscillatory motion. The wave vector of the surface oscillations has a component perpendicular to the background flow and tangential to the shear layer (in the equatorial plane, k_z component of the wave vector), which is consistent with the generation of field-aligned currents that flow on closed field lines between the inner portion of the boundary layer and the ionosphere. We calculate the distribution of wave power in the equatorial plane and find it consistent with the existence of a
Numerical simulation of MHD for electromagnetic edge dam in continuous casting.
Chang, F. C.
1999-03-30
A computer model was developed to predict eddy currents and fluid flows in molten steel. The model was verified by comparing predictions with experimental results of liquid-metal containment and fluid flow in electromagnetic (EM) edge dams (EMDs) designed at Inland Steel for twin-roll casting. The model can optimize the EMD design so it is suitable for application, and minimize expensive, time-consuming full-scale testing. Numerical simulation was performed by coupling a three-dimensional (3-D) finite-element EM code (ELEKTRA) and a 3-D finite-difference fluids code (CaPS-EM) to solve heat transfer, fluid flow, and turbulence transport in a casting process that involves EM fields. ELEKTRA is able to predict the eddy-current distribution and the electromagnetic forces in complex geometries. CaPS-EM is capable of modeling fluid flows with free surfaces. Results of the numerical simulation compared measurements obtained from a static test.
Spiking network simulation code for petascale computers
Kunkel, Susanne; Schmidt, Maximilian; Eppler, Jochen M.; Plesser, Hans E.; Masumoto, Gen; Igarashi, Jun; Ishii, Shin; Fukai, Tomoki; Morrison, Abigail; Diesmann, Markus; Helias, Moritz
2014-01-01
Brain-scale networks exhibit a breathtaking heterogeneity in the dynamical properties and parameters of their constituents. At cellular resolution, the entities of theory are neurons and synapses and over the past decade researchers have learned to manage the heterogeneity of neurons and synapses with efficient data structures. Already early parallel simulation codes stored synapses in a distributed fashion such that a synapse solely consumes memory on the compute node harboring the target neuron. As petaflop computers with some 100,000 nodes become increasingly available for neuroscience, new challenges arise for neuronal network simulation software: Each neuron contacts on the order of 10,000 other neurons and thus has targets only on a fraction of all compute nodes; furthermore, for any given source neuron, at most a single synapse is typically created on any compute node. From the viewpoint of an individual compute node, the heterogeneity in the synaptic target lists thus collapses along two dimensions: the dimension of the types of synapses and the dimension of the number of synapses of a given type. Here we present a data structure taking advantage of this double collapse using metaprogramming techniques. After introducing the relevant scaling scenario for brain-scale simulations, we quantitatively discuss the performance on two supercomputers. We show that the novel architecture scales to the largest petascale supercomputers available today. PMID:25346682
Spiking network simulation code for petascale computers
Susanne eKunkel
2014-10-01
Full Text Available Brain-scale networks exhibit a breathtaking heterogeneity in the dynamical properties and parameters of their constituents. At cellular resolution, the entities of theory are neurons and synapses and over the past decade researchers have learned to manage the heterogeneity of neurons and synapses with efficient data structures. Already early parallel simulation codes stored synapses in a distributed fashion such that a synapse solely consumes memory on the compute node harboring the target neuron. As petaflop computers with some 100,000 nodes become increasingly available for neuroscience, new challenges arise for neuronal network simulation software: Each neuron contacts on the order of 10,000 other neurons and thus has targets only on a fraction of all compute nodes; furthermore, for any given source neuron, at most a single synapse is typically created on any compute node. From the viewpoint of an individual compute node, the heterogeneity in the synaptic target lists thus collapses along two dimensions: the dimension of the types of synapses and the dimension of the number of synapses of a given type. Here we present a data structure taking advantage of this double collapse using metaprogramming techniques. After introducing the relevant scaling scenario for brain-scale simulations, we quantitatively discuss the performance on two supercomputers. We show that the novel architecture scales to the largest petascale supercomputers available today.
Using Two-Ribbon Flare Observations and MHD Simulations to Constrain Flare Properties
Kazachenko, Maria D.; Lynch, Benjamin J.; Welsch, Brian
2016-05-01
Flare ribbons are emission structures that are frequently observed during flares in transition-region and chromospheric radiation. These typically straddle a polarity inversion line (PIL) of the radial magnetic field at the photosphere, and move apart as the flare progresses. The ribbon flux - the amount of unsigned photospheric magnetic flux swept out by flare ribbons - is thought to be related to the amount coronal magnetic reconnection, and hence provides a key diagnostic tool for understanding the physical processes at work in flares and CMEs. Previous measurements of the magnetic flux swept out by flare ribbons required time-consuming co-alignment between magnetograph and intensity data from different instruments, explaining why those studies only analyzed, at most, a few events. The launch of the Helioseismic and Magnetic Imager (HMI) and the Atmospheric Imaging Assembly (AIA), both aboard the Solar Dynamics Observatory (SDO), presented a rare opportunity to compile a much larger sample of flare-ribbon events than could readily be assembled before. We created a dataset of 363 events of both flare ribbon positions and fluxes, as a function of time, for all C9.-class and greater flares within 45 degrees of disk center observed by SDO from June 2010 till April 2015. For this purpose, we used vector magnetograms (2D magnetic field maps) from HMI and UV images from AIA. A critical problem with using unprocessed AIA data is the existence of spurious intensities in AIA data associated with strong flare emission, most notably "blooming" (spurious smearing of saturated signal into neighboring pixels, often in streaks). To overcome this difficulty, we have developed an algorithmic procedure that effectively excludes artifacts like blooming. We present our database and compare statistical properties of flare ribbons, e.g. evolutions of ribbon reconnection fluxes, reconnection flux rates and vertical currents with the properties from MHD simulations.
The cosmological simulation code GADGET-2
Springel, V
2005-01-01
We discuss the cosmological simulation code GADGET-2, a new massively parallel TreeSPH code, capable of following a collisionless fluid with the N-body method, and an ideal gas by means of smoothed particle hydrodynamics (SPH). Our implementation of SPH manifestly conserves energy and entropy in regions free of dissipation, while allowing for fully adaptive smoothing lengths. Gravitational forces are computed with a hierarchical multipole expansion, which can optionally be applied in the form of a TreePM algorithm, where only short-range forces are computed with the `tree'-method while long-range forces are determined with Fourier techniques. Time integration is based on a quasi-symplectic scheme where long-range and short-range forces can be integrated with different timesteps. Individual and adaptive short-range timesteps may also be employed. The domain decomposition used in the parallelisation algorithm is based on a space-filling curve, resulting in high flexibility and tree force errors that do not depe...
Malapaka, Shiva Kumar; Mueller, Wolf-Christian [Max-Planck Institute for Plasma Physics, Boltzmannstrasse 2, D-85748 Garching bei Muenchen (Germany)
2013-09-01
Statistical properties of the Sun's photospheric turbulent magnetic field, especially those of the active regions (ARs), have been studied using the line-of-sight data from magnetograms taken by the Solar and Heliospheric Observatory and several other instruments. This includes structure functions and their exponents, flatness curves, and correlation functions. In these works, the dependence of structure function exponents ({zeta}{sub p}) of the order of the structure functions (p) was modeled using a non-intermittent K41 model. It is now well known that the ARs are highly turbulent and are associated with strong intermittent events. In this paper, we compare some of the observations from Abramenko et al. with the log-Poisson model used for modeling intermittent MHD turbulent flows. Next, we analyze the structure function data obtained from the direct numerical simulations (DNS) of homogeneous, incompressible 3D-MHD turbulence in three cases: sustained by forcing, freely decaying, and a flow initially driven and later allowed to decay (case 3). The respective DNS replicate the properties seen in the plots of {zeta}{sub p} against p of ARs. We also reproduce the trends and changes observed in intermittency in flatness and correlation functions of ARs. It is suggested from this analysis that an AR in the onset phase of a flare can be treated as a forced 3D-MHD turbulent system in its simplest form and that the flaring stage is representative of decaying 3D-MHD turbulence. It is also inferred that significant changes in intermittency from the initial onset phase of a flare to its final peak flaring phase are related to the time taken by the system to reach the initial onset phase.
2008-01-01
A three-dimensional (3-D) Hall MHD simulation is carried out to study the roles of initial current carrier in the topology of magnetic field, the generation and distribu- tion of field aligned currents (FACs), and the appearance of Alfvén waves. Consid- ering the contribution of ions to the initial current, the topology of the obtained magnetic field turns to be more complex. In some cases, it is found that not only the traditional By quadrupole structure but also a reversal By quadrupole structure appears in the simulation box. This can explain the observational features near the diffusion region, which are inconsistent with the Hall MHD theory with the total ini- tial current carried by electrons. Several other interesting features are also emerged. First, motions of electrons and ions are decoupled from each other in the small plasma region (Hall effect region) with a scale less than or comparable with the ion inertial length or ion skin depth di=c/ωp. In the non-Hall effect region, the global magnetic structure is shifted in +y direction under the influence of ions with initial y directional motion. However, in the Hall effect region, magnetic field lines are bent in ?y direction, mainly controlled by the motion of electrons, then By is generated. Second, FACs emerge as a result of the appearance of By. Compared with the prior Hall MHD simulation results, the generated FACs shift in +y direction, and hence the dawn-dusk symmetry is broken. Third, the Walén relation in our simulations is consistent with the Walén relation in Hall plasma, thus the presence of Alfvén wave is confirmed.
Non-equilibrium helium ionization in an MHD simulation of the solar atmosphere
Golding, Thomas Peter; Carlsson, Mats
2015-01-01
The ionization state of the gas in the dynamic solar chromosphere can depart strongly from the instantaneous statistical equilibrium commonly assumed in numerical modeling. We improve on earlier simulations of the solar atmosphere that only included non-equilbrium hydrogen ionization by performing a 2D radiation-magneto-hydrodynamics simulation featuring non-equilibrium ionization of both hydrogen and helium. The simulation includes the effect of hydrogen Lyman-$\\alpha$ and the EUV radiation from the corona on the ionization and heating of the atmosphere. Details on code implementation are given. We obtain helium ion fractions that are far from their equilibrium values. Comparison with models with LTE ionization shows that non-equilibrium helium ionization leads to higher temperatures in wave fronts and lower temperatures in the gas between shocks. Assuming LTE ionization results in a thermostat-like behaviour with matter accumulating around the temperatures where the LTE ionization fractions change rapidly. ...
Leenaarts, J; Hansteen, V; van der Voort, L Rouppe
2009-01-01
Interpretation of imagery of the solar chromosphere in the widely used \\CaIIIR infrared line is hampered by its complex, three-dimensional and non-LTE formation. Forward modelling is required to aid understanding. We use a 3D non-LTE radiative transfer code to compute synthetic \\CaIIIR images from a radiation-MHD simulation of the solar atmosphere spanning from the convection zone to the corona. We compare the simulation with observations obtained with the CRISP filter at the Swedish 1--m Solar Telescope. We find that the simulation reproduces dark patches in the blue line wing caused by Doppler shifts, brightenings in the line core caused by upward-propagating shocks and thin dark elongated structures in the line core that form the interface between upward and downward gas motion in the chromosphere. The synthetic line core is narrower than the observed one, indicating that the sun exhibits both more vigorous large-scale dynamics as well as small scale motions that are not resolved within the simulation, pre...
M. Palmroth
2005-09-01
Full Text Available We investigate the Northern Hemisphere Joule heating from several observational and computational sources with the purpose of calibrating a previously identified functional dependence between solar wind parameters and ionospheric total energy consumption computed from a global magnetohydrodynamic (MHD simulation (Grand Unified Magnetosphere Ionosphere Coupling Simulation, GUMICS-4. In this paper, the calibration focuses on determining the amount and temporal characteristics of Northern Hemisphere Joule heating. Joule heating during a substorm is estimated from global observations, including electric fields provided by Super Dual Auroral Network (SuperDARN and Pedersen conductances given by the ultraviolet (UV and X-ray imagers on board the Polar satellite. Furthermore, Joule heating is assessed from several activity index proxies, large statistical surveys, assimilative data methods (AMIE, and the global MHD simulation GUMICS-4. We show that the temporal and spatial variation of the Joule heating computed from the GUMICS-4 simulation is consistent with observational and statistical methods. However, the different observational methods do not give a consistent estimate for the magnitude of the global Joule heating. We suggest that multiplying the GUMICS-4 total Joule heating by a factor of 10 approximates the observed Joule heating reasonably well. The lesser amount of Joule heating in GUMICS-4 is essentially caused by weaker Region 2 currents and polar cap potentials. We also show by theoretical arguments that multiplying independent measurements of averaged electric fields and Pedersen conductances yields an overestimation of Joule heating.
Keywords. Ionosphere (Auroral ionosphere; Modeling and forecasting; Electric fields and currents
Palmroth, M.; Janhunen, P.; Pulkkinen, T. I.; Aksnes, A.; Lu, G.; Østgaard, N.; Watermann, J.; Reeves, G. D.; Germany, G. A.
2005-09-01
We investigate the Northern Hemisphere Joule heating from several observational and computational sources with the purpose of calibrating a previously identified functional dependence between solar wind parameters and ionospheric total energy consumption computed from a global magnetohydrodynamic (MHD) simulation (Grand Unified Magnetosphere Ionosphere Coupling Simulation, GUMICS-4). In this paper, the calibration focuses on determining the amount and temporal characteristics of Northern Hemisphere Joule heating. Joule heating during a substorm is estimated from global observations, including electric fields provided by Super Dual Auroral Network (SuperDARN) and Pedersen conductances given by the ultraviolet (UV) and X-ray imagers on board the Polar satellite. Furthermore, Joule heating is assessed from several activity index proxies, large statistical surveys, assimilative data methods (AMIE), and the global MHD simulation GUMICS-4. We show that the temporal and spatial variation of the Joule heating computed from the GUMICS-4 simulation is consistent with observational and statistical methods. However, the different observational methods do not give a consistent estimate for the magnitude of the global Joule heating. We suggest that multiplying the GUMICS-4 total Joule heating by a factor of 10 approximates the observed Joule heating reasonably well. The lesser amount of Joule heating in GUMICS-4 is essentially caused by weaker Region 2 currents and polar cap potentials. We also show by theoretical arguments that multiplying independent measurements of averaged electric fields and Pedersen conductances yields an overestimation of Joule heating. Keywords. Ionosphere (Auroral ionosphere; Modeling and forecasting; Electric fields and currents)
Kolb, C.E.; Yousefian, V.; Wormhoudt, J.; Haimes, R.; Martinez-Sanchez, M.; Kerrebrock, J.L.
1978-01-30
Research has included theoretical modeling of important plasma chemical effects such as: conductivity reductions due to condensed slag/electron interactions; conductivity and generator efficiency reductions due to the formation of slag-related negative ion species; and the loss of alkali seed due to chemical combination with condensed slag. A summary of the major conclusions in each of these areas is presented. A major output of the modeling effort has been the development of an MHD plasma chemistry core flow model. This model has been formulated into a computer program designated the PACKAGE code (Plasma Analysis, Chemical Kinetics, And Generator Efficiency). The PACKAGE code is designed to calculate the effect of coal rank, ash percentage, ash composition, air preheat temperatures, equivalence ratio, and various generator channel parameters on the overall efficiency of open-cycle, coal-fired MHD generators. A complete description of the PACKAGE code and a preliminary version of the PACKAGE user's manual are included. A laboratory measurements program involving direct, mass spectrometric sampling of the positive and negative ions formed in a one atmosphere coal combustion plasma was also completed during the contract's initial phase. The relative ion concentrations formed in a plasma due to the methane augmented combustion of pulverized Montana Rosebud coal with potassium carbonate seed and preheated air are summarized. Positive ions measured include K/sup +/, KO/sup +/, Na/sup +/, Rb/sup +/, Cs/sup +/, and CsO/sup +/, while negative ions identified include PO/sub 3//sup -/, PO/sub 2//sup -/, BO/sub 2//sup -/, OH/sup -/, SH/sup -/, and probably HCrO/sub 3/, HMoO/sub 4//sup -/, and HWO/sub 3//sup -/. Comparison of the measurements with PACKAGE code predictions are presented. Preliminary design considerations for a mass spectrometric sampling probe capable of characterizing coal combustion plasmas from full scale combustors and flow trains are presented
Grete, P; Schmidt, W; Schleicher, D R G
2016-01-01
Even though compressible plasma turbulence is encountered in many astrophysical phenomena, its effect is often not well understood. Furthermore, direct numerical simulations are typically not able to reach the extreme parameters of these processes. For this reason, large-eddy simulations (LES), which only simulate large and intermediate scales directly, are employed. The smallest, unresolved scales and the interactions between small and large scales are introduced by means of a subgrid-scale (SGS) model. We propose and verify a new set of nonlinear SGS closures for future application as an SGS model in LES of compressible magnetohydrodynamics (MHD). We use 15 simulations (without explicit SGS model) of forced, isotropic, homogeneous turbulence with varying sonic Mach number $\\mathrm{M_s} = 0.2$ to $20$ as reference data for the most extensive \\textit{a priori} tests performed so far in literature. In these tests we explicitly filter the reference data and compare the performance of the new closures against th...
Hayashi, K.; Hmi Team
2010-12-01
We will report results of the MHD simulation of the solar corona and solar wind using the HMI magnetic field data, especially focusing on a simulated eruption of a coronal streamer that reasonably corresponds to a large-scale coronal eruption event observed on August 1, 2010. The pre-event coronal situation is prepared through the time-relaxation MHD simulation using the synoptic map data of the solar surface magnetic field for a period of the Carrington Rotation 2098. Then, the global magnetic field evolutions from CR 2098 to 2099 are introduced in the simulation by means of a boundary model we recently developed, which enable to trace the sub-Alfvenic MHD responses of the corona numerically. The simulated coronal features include the formation of the two twisted coronal magnetic field structures along the magnetically inversion lines at the lowermost corona (coinciding the two observed filaments at west-north part of the solar disk) and the large-scale outward motions and decay of the closed-field streamer above the two twisted-field regions. Our MHD simulation model did not include the triggering event directly, and our simulations were done in somewhat low resolution in space. However, the reasonable success in reproducing coronal features relating a specific event in a well-known manner (using the synoptic map format data and the MHD simulation model) shows that the new dataset from HMI will be useful for the models, such as the MHD and the potential field models, as the previous dataset by SOHO/MDI.
First 3D radiative transfer with scattering for domain-decomposed MHD simulations
Hayek, W [Research School of Astronomy and Astrophysics, Australian National University, Cotter Road, Weston Creek ACT 2611 (Australia)], E-mail: hayek@mpa-garching.mpg.de
2008-12-15
This paper presents an implementation of the Gauss-Seidel solver for radiative transfer with scattering in the Oslo Stagger Code. It fully supports MPI parallelism through domain decomposition of the simulation box, enabling fast computation of radiative transfer at a high resolution. Continuum and line opacities are treated with either a multigroup method or opacity sampling. Line scattering probabilities are estimated using the van Regemorter approximation for de-excitation rates of electron collisions. A solar-type test simulation with continuum and line scattering exhibits a steeper temperature gradient due to decreased radiative heating above the optical surface when compared with the strict local thermodynamic equilibrium (LTE) case. The classical van Regemorter approximation may overestimate the importance of line scattering, implying that the true temperature structure will be in between the LTE case and the scattering case considered here. It is demonstrated that continuum scattering is unimportant in the case of the Sun.
First 3D radiative transfer with scattering for domain-decomposed MHD simulations
Hayek, W.
2008-12-01
This paper presents an implementation of the Gauss Seidel solver for radiative transfer with scattering in the Oslo Stagger Code. It fully supports MPI parallelism through domain decomposition of the simulation box, enabling fast computation of radiative transfer at a high resolution. Continuum and line opacities are treated with either a multigroup method or opacity sampling. Line scattering probabilities are estimated using the van Regemorter approximation for de-excitation rates of electron collisions. A solar-type test simulation with continuum and line scattering exhibits a steeper temperature gradient due to decreased radiative heating above the optical surface when compared with the strict local thermodynamic equilibrium (LTE) case. The classical van Regemorter approximation may overestimate the importance of line scattering, implying that the true temperature structure will be in between the LTE case and the scattering case considered here. It is demonstrated that continuum scattering is unimportant in the case of the Sun.
Radiation-MHD simulations for the development of a spark discharge channel.
Niederhaus, John Henry; Jorgenson, Roy E.; Warne, Larry K.; Chen, Kenneth C.
2017-04-01
The growth of a cylindrical s park discharge channel in water and Lexan is studied using a series of one - dimensional simulations with the finite - element radiation - magnetohydrodynamics code ALEGRA. Computed solutions are analyzed in order to characterize the rate of growth and dynamics of the spark c hannels during the rising - current phase of the drive pulse. The current ramp rate is varied between 0.2 and 3.0 kA/ns, and values of the mechanical coupling coefficient K p are extracted for each case. The simulations predict spark channel expansion veloc ities primarily in the range of 2000 to 3500 m/s, channel pressures primarily in the range 10 - 40 GPa, and K p values primarily between 1.1 and 1.4. When Lexan is preheated, slightly larger expansion velocities and smaller K p values are predicted , but the o verall behavior is unchanged.
Cyclic thermal signature in a global MHD simulation of solar convection
Cossette, J.; Charbonneau, P.; Smolarkiewicz, P. K.
2013-12-01
Space-based observations have clearly established that total solar irradiance (TSI) varies on time scales from minutes to days and months as well as on the longer time scale of the 11-year solar cycle. The most conspicuous of these variations is arguably the slight increase of TSI (0.1%) at solar maxima relative to solar minima. Models that include contributions from surface solar magnetism alone (i.e. sunspots, faculae and magnetic network) have been very successful at reproducing the observed TSI fluctuations on time scales shorter than a year, but leave some doubts as to the origin of the longer decadal fluctuations. In particular, one school of thought argues that surface magnetism alone can explain the entire TSI variance; see (Lean & al. 1998, ApJ, 492, 390), whereas; the other emphasizes on taking into account the effect of a global modulation of solar thermal structure by magnetic activity; see (Li & al. 2003, ApJ, 591, 1267). Observationally, the potential for the occurrence of magnetically-modulated global structural changes is supported by a positive correlation between p-mode oscillation frequencies and the TSI cycle as well as by recent evidence for a long-term trend in the TSI record that is not seen in indicators of surface magnetism; see (Bhatnagar & al. 1999, ApJ, 521, 885; Fröhlich 2013, Space Sci Rev,176, 237). Additionally, 1D structural solar models have demonstrated that the inclusion of a magnetically-modulated turbulent mechanism could explain the observed p-mode oscillation frequency changes with great accuracy. However, these models relied upon an ad-hoc parametrization of the alleged process and therefore obtaining a complete physical picture of the modulating mechanism requires solving the equations governing the self-consistent evolution of the solar plasma. Here we present a global magnetohydrodynamical (MHD) simulation of solar convection extending over more than a millennium that produces large-scale solar-like axisymmetric magnetic
Numerical simulation of flare energy build-up and release via Joule dissipation. [solar MHD model
Wu, S. T.; Bao, J. J.; Wang, J. F.
1986-01-01
A new numerical MHD model is developed to study the evolution of an active region due to photospheric converging motion, which leads to magnetic-energy buildup in the form of electric current. Because this new MHD model has incorporated finite conductivity, the energy conversion occurs from magnetic mode to thermal mode through Joule dissipation. In order to test the causality relationship between the occurrence of flare and photospheric motion, a multiple-pole configuration with neutral point is used. Using these results it is found that in addition to the converging motion, the initial magnetic-field configuration and the redistribution of the magnetic flux at photospheric level enhance the possibility for the development of a flare.
Observational signatures of numerically simulated MHD waves in small-scale fluxtubes
Khomenko, E; Felipe, T
2008-01-01
We present some results obtained from the synthesis of Stokes profiles in small-scale flux tubes with propagating MHD waves. To that aim, realistic flux tubes showing internal structure have been excited with 5 min period drivers, allowing non-linear waves to propagate inside the magnetic structure. The observational signatures of these waves in Stokes profiles of several spectral lines that are commonly used in spectropolarimetric measurements are discussed.
Communication Systems Simulator with Error Correcting Codes Using MATLAB
Gomez, C.; Gonzalez, J. E.; Pardo, J. M.
2003-01-01
In this work, the characteristics of a simulator for channel coding techniques used in communication systems, are described. This software has been designed for engineering students in order to facilitate the understanding of how the error correcting codes work. To help students understand easily the concepts related to these kinds of codes, a…
The stellar atmosphere simulation code Bifrost. Code description and validation
Gudiksen, B.V.; Carlsson, M.; Hansteen, V.H.; Hayek, W.; Leenaarts, J.|info:eu-repo/dai/nl/304837946; Martínez-Sykora, J.
2011-01-01
Context. Numerical simulations of stellar convection and photospheres have been developed to the point where detailed shapes of observed spectral lines can be explained. Stellar atmospheres are very complex, and very different physical regimes are present in the convection zone, photosphere,
Xie, Lianghai; Li, Lei; Zhang, Yiteng; Feng, Yongyong; Wang, Xinyue; Zhang, Aibing; Kong, Linggao
2015-08-01
Lunar minimagnetosphere formed by the interaction between the solar wind and a local crustal field often has a scale size comparable to the ion inertia length, in which the Hall effect is very important. In this paper, the general characteristics of lunar minimagnetosphere are investigated by three-dimensional Hall MHD simulations. It is found that the solar wind ions can penetrate across the magnetopause to reduce the density depletion and cause the merging of the shock and magnetopause, but the electrons are still blocked at the boundary. Besides, asymmetric convection occurs, resulting in the magnetic field piles up on one side while the plasma gathers on the other side. The size of the minimagnetosphere is determined by both the solar zenith angle and the magnetosonic Mach number, while the Hall effect is determined by the ratio of the pressure balance distance to the ion inertia length. When the ratio gets small, the shock may disappear. Finally, we present a global Hall MHD simulation for comparison with the observation from Chang'E-2 satellite on 11 October 2010 and confirm that Chang'E-2 flew across compression regions of two separate minimagnetospheres.
Software quality and process improvement in scientific simulation codes
Ambrosiano, J.; Webster, R. [Los Alamos National Lab., NM (United States)
1997-11-01
This report contains viewgraphs on the quest to develope better simulation code quality through process modeling and improvement. This study is based on the experience of the authors and interviews with ten subjects chosen from simulation code development teams at LANL. This study is descriptive rather than scientific.
A New Three-Dimensional Code for Simulation of Ion Beam Extraction: Ion Optics Simulator
JIN Dazhi; HUANG Tao; HU Quan; YANG Zhonghai
2008-01-01
A new thee-dimensional code, ion optics simulator (IOS), to simulate ion beam extraction is developed in visual C++ language. The theoretical model, the flowchart of code, and the results of calculation as an example are presented.
NON-EQUILIBRIUM HELIUM IONIZATION IN AN MHD SIMULATION OF THE SOLAR ATMOSPHERE
Golding, Thomas Peter; Carlsson, Mats [Institute of Theoretical Astrophysics, University of Oslo, P.O. Box 1029 Blindern, NO-0315 Oslo (Norway); Leenaarts, Jorrit, E-mail: thomas.golding@astro.uio.no, E-mail: mats.carlsson@astro.uio.no, E-mail: jorrit.leenaarts@astro.su.se [Institute for Solar Physics, Department of Astronomy, Stockholm University, AlbaNova University Centre, SE-106 91 Stockholm (Sweden)
2016-02-01
The ionization state of the gas in the dynamic solar chromosphere can depart strongly from the instantaneous statistical equilibrium commonly assumed in numerical modeling. We improve on earlier simulations of the solar atmosphere that only included non-equilibrium hydrogen ionization by performing a 2D radiation-magnetohydrodynamics simulation featuring non-equilibrium ionization of both hydrogen and helium. The simulation includes the effect of hydrogen Lyα and the EUV radiation from the corona on the ionization and heating of the atmosphere. Details on code implementation are given. We obtain helium ion fractions that are far from their equilibrium values. Comparison with models with local thermodynamic equilibrium (LTE) ionization shows that non-equilibrium helium ionization leads to higher temperatures in wavefronts and lower temperatures in the gas between shocks. Assuming LTE ionization results in a thermostat-like behavior with matter accumulating around the temperatures where the LTE ionization fractions change rapidly. Comparison of DEM curves computed from our models shows that non-equilibrium ionization leads to more radiating material in the temperature range 11–18 kK, compared to models with LTE helium ionization. We conclude that non-equilibrium helium ionization is important for the dynamics and thermal structure of the upper chromosphere and transition region. It might also help resolve the problem that intensities of chromospheric lines computed from current models are smaller than those observed.
Krause, M.; Camenzind, M.
2001-12-01
In the present paper, we examine the convergence behavior and inter-code reliability of astrophysical jet simulations in axial symmetry. We consider both pure hydrodynamic jets and jets with a dynamically significant magnetic field. The setups were chosen to match the setups of two other publications, and recomputed with the MHD code NIRVANA. We show that NIRVANA and the two other codes give comparable, but not identical results. We explain the differences by the different application of artificial viscosity in the three codes and numerical details, which can be summarized in a resolution effect, in the case without magnetic field: NIRVANA turns out to be a fair code of medium efficiency. It needs approximately twice the resolution as the code by Lind (Lind et al. 1989) and half the resolution as the code by Kössl (Kössl & Müller 1988). We find that some global properties of a hydrodynamical jet simulation, like e.g. the bow shock velocity, converge at 100 points per beam radius (ppb) with NIRVANA. The situation is quite different after switching on the toroidal magnetic field: in this case, global properties converge even at 10 ppb. In both cases, details of the inner jet structure and especially the terminal shock region are still insufficiently resolved, even at our highest resolution of 70 ppb in the magnetized case and 400 ppb for the pure hydrodynamic jet. The magnetized jet even suffers from a fatal retreat of the Mach disk towards the inflow boundary, which indicates that this simulation does not converge, in the end. This is also in definite disagreement with earlier simulations, and challenges further studies of the problem with other codes. In the case of our highest resolution simulation, we can report two new features: first, small scale Kelvin-Helmholtz instabilities are excited at the contact discontinuity next to the jet head. This slows down the development of the long wavelength Kelvin-Helmholtz instability and its turbulent cascade to smaller
Deng, Wei; Zhang, Bing; Li, Shengtai
2015-01-01
We perform 3D relativistic ideal MHD simulations to study the collisions between high-$\\sigma$ (Poynting-flux-dominated) blobs which contain both poloidal and toroidal magnetic field components. This is meant to mimic the interactions inside a highly variable Poynting-flux-dominated jet. We discover a significant electromagnetic field (EMF) energy dissipation with an Alfv\\'enic rate with the efficiency around 35\\%. Detailed analyses show that this dissipation is mostly facilitated by the collision-induced magnetic reconnection. Additional resolution and parameter studies show a robust result that the relative EMF energy dissipation efficiency is nearly independent of the numerical resolution or most physical parameters in the relevant parameter range. The reconnection outflows in our simulation can potentially form the multi-orientation relativistic mini-jets as needed for several analytical models. We also find a linear relationship between the $\\sigma$ values before and after the major EMF energy dissipatio...
Huang, Z.; Toth, G.; Gombosi, T. I.; Jia, X.; Rubin, M.; Hansen, K. C.; Fougere, N.; Bieler, A. M.; Shou, Y.; Altwegg, K.; Combi, M. R.; Tenishev, V.
2015-12-01
The neutral and plasma environment is critical in understanding the interaction of comet Churyumov-Gerasimenko (CG), the target of the Rosetta mission, and the solar wind. To serve this need and support the Rosetta mission, we develop a 3-D four fluid model, which is based on BATS-R-US within the SWMF (Space Weather Modeling Framework) that solves the governing multi-fluid MHD equations and the Euler equations for the neutral gas fluid. These equations describe the behavior and interactions of the cometary heavy ions, the solar wind protons, the electrons, and the neutrals. This model incorporates different mass loading processes, including photo and electron impact ionization, charge exchange, dissociative ion-electron recombination, and collisional interactions between different fluids. We simulate the near nucleus plasma and neutral gas environment near perihelion with a realistic shape model of CG and compare our simulation results with Rosetta observations.
Yokoyama, Takaaki; Oi, Yoshiaki; Toriumi, Shin
2017-08-01
Active regions holding a delta-sunspot are known to produce the largest class of solar flares. How, where, and when such large flares occur above a delta-sunspot are still under debate. For studying this, 3D MHD simulations of the emergence of a subsurface flux tube at two locations in a simulation box modeling the convection zone to the corona were conducted. We found that a flux rope is formed as a consequence of magnetic reconnection of two bipolar loops and sunspot rotation caused by the twist of the subsurface flux tube. Moreover, the flux rope stops ascending when the initial background is not magnetized, whereas it rises up to the upper boundary when a reconnection favorably oriented pre-existing field is introduced to the initial background.
A New MHD-assisted Stokes Inversion Technique
Riethmüller, T. L.; Solanki, S. K.; Barthol, P.; Gandorfer, A.; Gizon, L.; Hirzberger, J.; van Noort, M.; Blanco Rodríguez, J.; Del Toro Iniesta, J. C.; Orozco Suárez, D.; Schmidt, W.; Martínez Pillet, V.; Knölker, M.
2017-03-01
We present a new method of Stokes inversion of spectropolarimetric data and evaluate it by taking the example of a Sunrise/IMaX observation. An archive of synthetic Stokes profiles is obtained by the spectral synthesis of state-of-the-art magnetohydrodynamics (MHD) simulations and a realistic degradation to the level of the observed data. The definition of a merit function allows the archive to be searched for the synthetic Stokes profiles that best match the observed profiles. In contrast to traditional Stokes inversion codes, which solve the Unno-Rachkovsky equations for the polarized radiative transfer numerically and fit the Stokes profiles iteratively, the new technique provides the full set of atmospheric parameters. This gives us the ability to start an MHD simulation that takes the inversion result as an initial condition. After a relaxation process of half an hour solar time we obtain physically consistent MHD data sets with a target similar to the observation. The new MHD simulation is used to repeat the method in a second iteration, which further improves the match between observation and simulation, resulting in a factor of 2.2 lower mean {χ }2 value. One advantage of the new technique is that it provides the physical parameters on a geometrical height scale. It constitutes a first step toward inversions that give results consistent with the MHD equations.
LEE; ChunHian
2010-01-01
Direct numerical simulation (DNS) of incompressible magnetohydrodynamic (MHD) turbulent channel flow has been performed under the low magnetic Reynolds number assumption.The velocity-electric field and electric-electric field correlations were studied in the present work for different magnetic field orientations.The Kenjeres-Hanjalic (K-H) model was validated with the DNS data in a term by term manner.The numerical results showed that the K-H model makes good predictions for most components of the velocity-electric field correlations.The mechanisms of turbulence suppression were also analyzed for different magnetic field orientations utilizing the DNS data and the K-H model.The results revealed that the dissipative MHD source term is responsible for the turbulence suppression for the case of streamwise and spanwise magnetic orientation,while the Lorentz force which speeds up the near-wall fluid and decreases the production term is responsible for the turbulence suppression for the case of the wall normal magnetic orientation.
The Particle Accelerator Simulation Code PyORBIT
Gorlov, Timofey V [ORNL; Holmes, Jeffrey A [ORNL; Cousineau, Sarah M [ORNL; Shishlo, Andrei P [ORNL
2015-01-01
The particle accelerator simulation code PyORBIT is presented. The structure, implementation, history, parallel and simulation capabilities, and future development of the code are discussed. The PyORBIT code is a new implementation and extension of algorithms of the original ORBIT code that was developed for the Spallation Neutron Source accelerator at the Oak Ridge National Laboratory. The PyORBIT code has a two level structure. The upper level uses the Python programming language to control the flow of intensive calculations performed by the lower level code implemented in the C++ language. The parallel capabilities are based on MPI communications. The PyORBIT is an open source code accessible to the public through the Google Open Source Projects Hosting service.
Light Curves from an MHD Simulation of a Black Hole Accretion Disk
Schnittman, J D; Hawley, J F; Schnittman, Jeremy D.; Krolik, Julian H.; Hawley, John F.
2006-01-01
We use a relativistic ray-tracing code to calculate the light curves observed from a global general relativistic magneto-hydrodynamic simulation of an accretion flow onto a Schwarzschild black hole. We apply three basic emission models to sample different properties of the time-dependent accretion disk. With one of these models, which assumes thermal blackbody emission and free-free absorption, we can predict qualitative features of the high-frequency power spectrum from stellar-mass black holes in the "Thermal Dominant" state. The simulated power spectrum is characterized by a power law of index Gamma ~ 3 and total rms fractional variance of ~ 1 % near the orbital frequency at the inner-most stable orbit. Initial results indicate the existence of transient QPO peaks with frequency ratios of nearly 2:3 at a 99.9% confidence limit, but they are not generic features because at any given time they are seen only from certain observer directions. Additionally, we present detailed analysis of the azimuthal structur...
Light Curves from an MHD Simulation of a Black Hole Accretion Disk
Schnittman, Jeremy D.; Krolik, Julian H.; Hawley, John F.
2006-11-01
We use a relativistic ray-tracing code to calculate the light curves observed from a global, general relativistic, magnetohydrodynamic simulation of an accretion flow onto a Schwarzschild black hole. We apply three basic emission models to sample different properties of the time-dependent accretion disk. With one of these models, which assumes thermal blackbody emission and free-free absorption, we can predict qualitative features of the high-frequency power spectrum from stellar-mass black holes in the ``thermal dominant'' state. The simulated power spectrum is characterized by a power law of index Γ~3 and total rms fractional variance of ~1% near the orbital frequency at the innermost stable orbit. Initial results indicate the existence of transient QPO peaks with frequency ratios of nearly 2:3 at a 99.9% confidence limit, but they are not generic features, because at any given time they are seen only from certain observer directions. In addition, we present detailed analysis of the azimuthal structure of the accretion disk and the evolution of density perturbations in the inner disk. These ``hot-spot'' structures appear to be roughly self-similar over a range of disk radii, with a single characteristic size δφ=25deg and δr/r=0.3, and typical lifetimes Tl~0.3Torb.
Two-component jet simulations: I. Topological stability of analytical MHD outflow solutions
Matsakos, T; Vlahakis, N; Massaglia, S; Mignone, A; Trussoni, E
2007-01-01
Observations of collimated outflows in young stellar objects indicate that several features of the jets can be understood by adopting the picture of a two-component outflow, wherein a central stellar component around the jet axis is surrounded by an extended disk-wind. The precise contribution of each component may depend on the intrinsic physical properties of the YSO-disk system as well as its evolutionary stage. In this context, the present article starts a systematic investigation of two-component jet models via time-dependent simulations of two prototypical and complementary analytical solutions, each closely related to the properties of stellar-outflows and disk-winds. These models describe a meridionally and a radially self-similar exact solution of the steady-state, ideal hydromagnetic equations, respectively. By using the PLUTO code to carry out the simulations, the study focuses on the topological stability of each of the two analytical solutions, which are successfully extended to all space by remo...
MHD turbulence and distributed chaos
Bershadskii, A
2016-01-01
It is shown, using results of recent direct numerical simulations, that spectral properties of distributed chaos in MHD turbulence with zero mean magnetic field are similar to those of hydrodynamic turbulence. An exception is MHD spontaneous breaking of space translational symmetry, when the stretched exponential spectrum $\\exp(-k/k_{\\beta})^{\\beta}$ has $\\beta=4/7$.
Code generation: a strategy for neural network simulators.
Goodman, Dan F M
2010-10-01
We demonstrate a technique for the design of neural network simulation software, runtime code generation. This technique can be used to give the user complete flexibility in specifying the mathematical model for their simulation in a high level way, along with the speed of code written in a low level language such as C+ +. It can also be used to write code only once but target different hardware platforms, including inexpensive high performance graphics processing units (GPUs). Code generation can be naturally combined with computer algebra systems to provide further simplification and optimisation of the generated code. The technique is quite general and could be applied to any simulation package. We demonstrate it with the 'Brian' simulator ( http://www.briansimulator.org ).
An advanced implicit solver for MHD
Udrea, Bogdan
A new implicit algorithm has been developed for the solution of the time-dependent, viscous and resistive single fluid magnetohydrodynamic (MHD) equations. The algorithm is based on an approximate Riemann solver for the hyperbolic fluxes and central differencing applied on a staggered grid for the parabolic fluxes. The algorithm employs a locally aligned coordinate system that allows the solution to the Riemann problems to be solved in a natural direction, normal to cell interfaces. The result is an original scheme that is robust and reduces the complexity of the flux formulas. The evaluation of the parabolic fluxes is also implemented using a locally aligned coordinate system, this time on the staggered grid. The implicit formulation employed by WARP3 is a two level scheme that was applied for the first time to the single fluid MHD model. The flux Jacobians that appear in the implicit scheme are evaluated numerically. The linear system that results from the implicit discretization is solved using a robust symmetric Gauss-Seidel method. The code has an explicit mode capability so that implementation and test of new algorithms or new physics can be performed in this simpler mode. Last but not least the code was designed and written to run on parallel computers so that complex, high resolution runs can be per formed in hours rather than days. The code has been benchmarked against analytical and experimental gas dynamics and MHD results. The benchmarks consisted of one-dimensional Riemann problems and diffusion dominated problems, two-dimensional supersonic flow over a wedge, axisymmetric magnetoplasmadynamic (MPD) thruster simulation and three-dimensional supersonic flow over intersecting wedges and spheromak stability simulation. The code has been proven to be robust and the results of the simulations showed excellent agreement with analytical and experimental results. Parallel performance studies showed that the code performs as expected when run on parallel
Winters, Andrew R.; Derigs, Dominik; Gassner, Gregor J.; Walch, Stefanie
2017-03-01
We describe a unique averaging procedure to design an entropy stable dissipation operator for the ideal magnetohydrodynamic (MHD) and compressible Euler equations. Often in the derivation of an entropy conservative numerical flux function much care is taken in the design and averaging of the entropy conservative numerical flux. We demonstrate in this work that if the discrete dissipation operator is not carefully chosen as well it can have deleterious effects on the numerical approximation. This is particularly true for very strong shocks or high Mach number flows present, for example, in astrophysical simulations. We present the underlying technique of how to construct a unique averaging technique for the discrete dissipation operator. We also demonstrate numerically the increased robustness of the approximation.
3D MHD simulation of post--flare supra--arcade downflows in a turbulent current sheet medium
Cécere, M; Costa, A; Schneiter, M
2014-01-01
Supra--arcade downflows (SADs) are sunward, generally dark, plasma density depletions originated above posteruption flare arcades. In this paper using 3D MHD simulations we investigate if the SAD cavities can be produced by a direct combination of the tearing mode and Kelvin--Helmholtz instabilities leading to a turbulent current sheet (CS) medium or if the current sheet is merely the background where SADs are produced triggered by an impulsive deposition of energy. We find that to give account of the observational dark lane structures an addition of local energy provided by a reconnection event is required. This local reconnection can trigger a nonlinear internal wave dynamic, generated by the bouncing and interfering of shocks and expansion waves that compose relatively stable voids.
Kang, Jihye
2014-01-01
Force-freeness of a solar magnetic field is a key to reconstructing invisible coronal magnetic structure of an emerging flux region on the Sun where active phenomena such as flares and coronal mass ejections frequently occur. We have performed magnetohydrodynamic (MHD) simulations which are adjusted to investigate force-freeness of an emerging magnetic field by using the virial theorem. Our focus is on how the force-free range of an emerging flux region develops and how it depends on the twist of a pre-emerged magnetic field. As an emerging flux region evolves, the upper limit of the force-free range continuously increases while the lower limit is asymptotically reduced to the order of a photospheric pressure scale height above the solar surface. As the twist becomes small the lower limit increases and then seems to be saturated. We also discuss the applicability of the virial theorem to an evolving magnetic structure on the Sun.
Zhang, Weiqun; Wang, Peng
2008-01-01
Magnetic field strengths inferred for relativistic outflows including gamma-ray bursts (GRB) and active galactic nuclei (AGN) are larger than naively expected by orders of magnitude. We present three-dimensional relativistic magnetohydrodynamics (MHD) simulations demonstrating amplification and saturation of magnetic field by a macroscopic turbulent dynamo triggered by the Kelvin-Helmholtz shear instability. We find rapid growth of electromagnetic energy due to the stretching and folding of field lines in the turbulent velocity field resulting from non-linear development of the instability. Using conditions relevant for GRB internal shocks and late phases of GRB afterglow, we obtain amplification of the electromagnetic energy fraction to $\\epsilon_B \\sim 5 \\times 10^{-3}$. This value decays slowly after the shear is dissipated and appears to be largely independent of the initial field strength. The conditions required for operation of the dynamo are the presence of velocity shear and some seed magnetization b...
Stepan, Jiri; Leenaarts, Jorrit; Carlsson, Mats
2015-01-01
Probing the magnetism of the upper solar chromosphere requires measuring and modeling the scattering polarization produced by anisotropic radiation pumping in UV spectral lines. Here we apply PORTA (a novel radiative transfer code) to investigate the hydrogen Ly$\\alpha$ line in a 3D model of the solar atmosphere resulting from a state of the art MHD simulation. At full spatial resolution the linear polarization signals are very significant all over the solar disk, with a large fraction of the field of view showing line-center amplitudes well above the 1% level. Via the Hanle effect the line-center polarization signals are sensitive to the magnetic field of the model's transition region, even when its mean field strength is only 15 G. The breaking of the axial symmetry of the radiation field produces significant forward-scattering polarization in Ly$\\alpha$, without the need of an inclined magnetic field. Interestingly, the Hanle effect tends to decrease such forward-scattering polarization signals in most of ...
X-Ray Spectra from MHD Simulations of Accreting Black Holes
Schnittman, Jeremy D.; Krolik, Julian H.; Noble, Scott C.
2012-01-01
We present the results of a new global radiation transport code coupled to a general relativistic magneto-hydrodynamic simulation of an accreting, nonrotating black hole. For the first time, we are able to explain from first principles in a self-consistent way the X-ray spectra observed from stellar-mass black holes, including a thermal peak, Compton reflection hump, power-law tail, and broad iron line. Varying only the mass accretion rate, we are able to reproduce the low/hard, steep power-law, and thermal-dominant states seen in most galactic black hole sources. The temperature in the corona is T(sub e) 10 keV in a boundary layer near the disk and rises smoothly to T(sub e) greater than or approximately 100 keV in low-density regions far above the disk. Even as the disk's reflection edge varies from the horizon out to approximately equal to 6M as the accretion rate decreases, we find that the shape of the Fe Ka line is remarkably constant. This is because photons emitted from the plunging region are strongly beamed into the horizon and never reach the observer. We have also carried out a basic timing analysis of the spectra and find that the fractional variability increases with photon energy and viewer inclination angle, consistent with the coronal hot spot model for X-ray fluctuations.
Non-thermal emission from relativistic MHD simulations of PWNe: from synchrotron to inverse Compton
Volpi, D; Amato, E; Bucciantini, N
2008-01-01
In this paper we complete the set of diagnostic tools for synchrotron emitting sources presented by Del Zanna et al. (Astron. Astrophys. 453, 621, 2006) with the computation of inverse Compton radiation from the same relativistic particles. Moreover we investigate, for the first time, the gamma-ray emission properties of Pulsar Wind Nebulae in the light of the axisymmetric jet-torus scenario. The method consists in evolving the relativistic MHD equations and the maximum energy of the emitting particles. The particle energy distribution function is split in two components: the radio one connected to a relic population born at the outburst of the supernova and the other associated to the wind population continuously accelerated at the termination shock and emitting up to the gamma-ray band. We consider the general Klein-Nishina cross section and three different photon targets: the nebular synchrotron photons, far-infrared thermal ones and the cosmic microwave background. The overall synchrotron spectrum is fitt...
Muhammad Mubashir Bhatti
2016-05-01
Full Text Available In this article, entropy generation with radiation on non-Newtonian Carreau nanofluid towards a shrinking sheet is investigated numerically. The effects of magnetohydrodynamics (MHD are also taken into account. Firstly, the governing flow problem is simplified into ordinary differential equations from partial differential equations with the help of similarity variables. The solution of the resulting nonlinear differential equations is solved numerically with the help of the successive linearization method and Chebyshev spectral collocation method. The influence of all the emerging parameters is discussed with the help of graphs and tables. It is observed that the influence of magnetic field and fluid parameters oppose the flow. It is also analyzed that thermal radiation effects and the Prandtl number show opposite behavior on temperature profile. Furthermore, it is also observed that entropy profile increases for all the physical parameters.
Morphology and dynamics of solar prominences from 3D MHD simulations
Terradas, J; Luna, M; Oliver, R; Ballester, J L
2014-01-01
In this paper we present a numerical study of the time evolution of solar prominences embedded in sheared magnetic arcades. The prominence is represented by a density enhancement in a background stratified atmosphere and is connected to the photosphere through the magnetic field. By solving the ideal magnetohydrodynamic (MHD) equations in three dimensions we study the dynamics for a range of parameters representative of real prominences. Depending on the parameters considered, we find prominences that are suspended above the photosphere, i.e., detached prominences, but also configurations resembling curtain or hedgerow prominences whose material continuously connects to the photosphere. The plasma$-\\beta$ is an important parameter that determines the shape of the structure. In many cases magnetic Rayleigh-Taylor (MRT) instabilities and oscillatory phenomena develop. Fingers and plumes are generated, affecting the whole prominence body and producing vertical structures in an essentially horizontal magnetic fie...
Simulation of Water Chemistry using and Geochemistry Code, PHREEQE
Chi, J.H. [Korea Electric Power Research Institute, Taejeon (Korea)
2001-07-01
This report introduces principles and procedures of simulation for water chemistry using a geochemistry code, PHREEQE. As and example of the application of this code, we described the simulation procedure for titration of an aquatic sample with strong acid to investigate the state of Carbonates in aquatic solution. Major contents of this report are as follows; Concepts and principles of PHREEQE, Kinds of chemical reactions which may be properly simulated by PHREEQE, The definition and meaning of each input data, An example of simulation using PHREEQE. (author). 2 figs., 1 tab.
Deng, Wei; Li, Hui; Zhang, Bing; Li, Shengtai
2015-06-01
We perform 3D relativistic ideal magnetohydrodynamics (MHD) simulations to study the collisions between high-σ (Poynting-flux-dominated (PFD)) blobs which contain both poloidal and toroidal magnetic field components. This is meant to mimic the interactions inside a highly variable PFD jet. We discover a significant electromagnetic field (EMF) energy dissipation with an Alfvénic rate with the efficiency around 35%. Detailed analyses show that this dissipation is mostly facilitated by the collision-induced magnetic reconnection. Additional resolution and parameter studies show a robust result that the relative EMF energy dissipation efficiency is nearly independent of the numerical resolution or most physical parameters in the relevant parameter range. The reconnection outflows in our simulation can potentially form the multi-orientation relativistic mini jets as needed for several analytical models. We also find a linear relationship between the σ values before and after the major EMF energy dissipation process. Our results give support to the proposed astrophysical models that invoke significant magnetic energy dissipation in PFD jets, such as the internal collision-induced magnetic reconnection and turbulence model for gamma-ray bursts, and reconnection triggered mini jets model for active galactic nuclei. The simulation movies are shown in http://www.physics.unlv.edu/∼deng/simulation1.html.
Advanced thermohydraulic simulation code for transients in LMFBRs (SSC-L code)
Agrawal, A.K.
1978-02-01
Physical models for various processes that are encountered in preaccident and transient simulation of thermohydraulic transients in the entire liquid metal fast breeder reactor (LMFBR) plant are described in this report. A computer code, SSC-L, was written as a part of the Super System Code (SSC) development project for the ''loop''-type designs of LMFBRs. This code has the self-starting capability, i.e., preaccident or steady-state calculations are performed internally. These results then serve as the starting point for the transient simulation.
Alexakis, A.
2009-04-01
Most astrophysical and planetary systems e.g., solar convection and stellar winds, are in a turbulent state and coupled to magnetic fields. Understanding and quantifying the statistical properties of magneto-hydro-dynamic (MHD) turbulence is crucial to explain the involved physical processes. Although the phenomenological theory of hydro-dynamic (HD) turbulence has been verified up to small corrections, a similar statement cannot be made for MHD turbulence. Since the phenomenological description of Hydrodynamic turbulence by Kolmogorov in 1941 there have been many attempts to derive a similar description for turbulence in conducting fluids (i.e Magneto-Hydrodynamic turbulence). However such a description is going to be based inevitably on strong assumptions (typically borrowed from hydrodynamics) that do not however necessarily apply to the MHD case. In this talk I will discuss some of the properties and differences of the energy and helicity cascades in turbulent MHD and HD flows. The investigation is going to be based on the analysis of direct numerical simulations. The cascades in MHD turbulence appear to be a more non-local process (in scale space) than in Hydrodynamics. Some implications of these results to turbulent modeling will be discussed
A methodology for the rigorous verification of plasma simulation codes
Riva, Fabio
2016-10-01
The methodology used to assess the reliability of numerical simulation codes constitutes the Verification and Validation (V&V) procedure. V&V is composed by two separate tasks: the verification, which is a mathematical issue targeted to assess that the physical model is correctly solved, and the validation, which determines the consistency of the code results, and therefore of the physical model, with experimental data. In the present talk we focus our attention on the verification, which in turn is composed by the code verification, targeted to assess that a physical model is correctly implemented in a simulation code, and the solution verification, that quantifies the numerical error affecting a simulation. Bridging the gap between plasma physics and other scientific domains, we introduced for the first time in our domain a rigorous methodology for the code verification, based on the method of manufactured solutions, as well as a solution verification based on the Richardson extrapolation. This methodology was applied to GBS, a three-dimensional fluid code based on a finite difference scheme, used to investigate the plasma turbulence in basic plasma physics experiments and in the tokamak scrape-off layer. Overcoming the difficulty of dealing with a numerical method intrinsically affected by statistical noise, we have now generalized the rigorous verification methodology to simulation codes based on the particle-in-cell algorithm, which are employed to solve Vlasov equation in the investigation of a number of plasma physics phenomena.
MHD thrust vectoring of a rocket engine
Labaune, Julien; Packan, Denis; Tholin, Fabien; Chemartin, Laurent; Stillace, Thierry; Masson, Frederic
2016-09-01
In this work, the possibility to use MagnetoHydroDynamics (MHD) to vectorize the thrust of a solid propellant rocket engine exhaust is investigated. Using a magnetic field for vectoring offers a mass gain and a reusability advantage compared to standard gimbaled, elastomer-joint systems. Analytical and numerical models were used to evaluate the flow deviation with a 1 Tesla magnetic field inside the nozzle. The fluid flow in the resistive MHD approximation is calculated using the KRONOS code from ONERA, coupling the hypersonic CFD platform CEDRE and the electrical code SATURNE from EDF. A critical parameter of these simulations is the electrical conductivity, which was evaluated using a set of equilibrium calculations with 25 species. Two models were used: local thermodynamic equilibrium and frozen flow. In both cases, chlorine captures a large fraction of free electrons, limiting the electrical conductivity to a value inadequate for thrust vectoring applications. However, when using chlorine-free propergols with 1% in mass of alkali, an MHD thrust vectoring of several degrees was obtained.
A multi-scale code for flexible hybrid simulations
Leukkunen, L; Lopez-Acevedo, O
2012-01-01
Multi-scale computer simulations combine the computationally efficient classical algorithms with more expensive but also more accurate ab-initio quantum mechanical algorithms. This work describes one implementation of multi-scale computations using the Atomistic Simulation Environment (ASE). This implementation can mix classical codes like LAMMPS and the Density Functional Theory-based GPAW. Any combination of codes linked via the ASE interface however can be mixed. We also introduce a framework to easily add classical force fields calculators for ASE using LAMMPS, which also allows harnessing the full performance of classical-only molecular dynamics. Our work makes it possible to combine different simulation codes, quantum mechanical or classical, with great ease and minimal coding effort.
李莉; 刘悦; 许欣洋; 夏新念
2012-01-01
A cylindrical model of linear MHD instabilities in tokamaks is presented. In the model, the cylindrical plasma is surrounded by a vacuum which is divided into inner and outer vacuum areas by a conducting wall. Linearized resistivity MHD equations with plasma viscosity are adopted to describe our model, and the equations are solved numerically as an initial value problem. Some of the results are used as benchmark tests for the code, and then a series of equilibrium current profiles are used to simulate the bootstrap current profiles in actual experiments with a bump on tail. Thus the effects of these kinds of profiles on MHD instabilities in tokamaks are revealed. From the analysis of the numerical results, it is found that more plasma can be confined when the center of the current bump is closer to the plasma surface, and a higher and narrower current bump has a better stabilizing effect on the MHD instabilities.
Coded source imaging simulation with visible light
Wang, Sheng; Zou, Yubin; Zhang, Xueshuang; Lu, Yuanrong; Guo, Zhiyu
2011-09-01
A coded source could increase the neutron flux with high L/ D ratio. It may benefit a neutron imaging system with low yield neutron source. Visible light CSI experiments were carried out to test the physical design and reconstruction algorithm. We used a non-mosaic Modified Uniformly Redundant Array (MURA) mask to project the shadow of black/white samples on a screen. A cooled-CCD camera was used to record the image on the screen. Different mask sizes and amplification factors were tested. The correlation, Wiener filter deconvolution and Richardson-Lucy maximum likelihood iteration algorithm were employed to reconstruct the object imaging from the original projection. The results show that CSI can benefit the low flux neutron imaging with high background noise.
Comparison of helioseismic cut-off frequency formulations by the means of MHD simulation results
Bourdin, Philippe-A.; Thaler, Irina; Roth, Markus
2017-04-01
The discussion of helioseismic wave phenomena requires a self-consistent description of the plasma pressure. Magnetically active regions on the Sun are observed to have distinct wave phenomena as compared to quiet regions. With better helioseismologic diagnostics near active regions one may also better understand not only the chromospheric energy budget, but also halo formation and running penumbral waves. The line formation height (with respect to the beta=1 level) and the magnetic field inclination near the solar surface are in the same time difficult to measure and important to correctly interpret observations. With the help of a large-scale 3D magneto-hydrodynamic (MHD) model, that features an active region as bottom boundary and has shown good agreement to various observations, we may compute values for theoretically derived formulations of cut-off frequencies from the model plasma parameters. Our results show strongly varying vertical atmospheric profiles and we give estimates of their influence on the expected cut-off frequencies.
The Effects of Differential Rotation on the Magnetic Structure of the Solar Corona: MHD Simulations
Lionello, Roberto; Riley, Pete; Linker, Jon A.; Mikic, Zoran
2004-01-01
Coronal holes are magnetically open regions from which the solar wind streams. Magnetic reconnection has been invoked to reconcile the apparently rigid rotation of coronal holes with the differential rotation of magnetic flux in the photosphere. This mechanism might also be relevant to the formation of the slow solar wind, the properties of which seem to indicate an origin from the opening of closed magnetic field lines. We have developed a global MHD model to study the effect of differential rotation on the coronal magnetic field. Starting from a magnetic flux distribution similar to that of Wang et al., which consists of a bipolar magnetic region added to a background dipole field, we applied differential rotation over a period of 5 solar rotations. The evolution of the magnetic field and of the boundaries of coronal holes are in substantial agreement with the findings of Wang et al.. We identified examples of interchange reconnection and other changes of topology of the magnetic field. Possible consequences for the origin of the slow solar wind are also discussed.
Muon simulation codes MUSIC and MUSUN for underground physics
Kudryavtsev, V A
2008-01-01
The paper describes two Monte Carlo codes dedicated to muon simulations: MUSIC (MUon SImulation Code) and MUSUN (MUon Simulations UNderground). MUSIC is a package for muon transport through matter. It is particularly useful for propagating muons through large thickness of rock or water, for instance from the surface down to underground/underwater laboratory. MUSUN is designed to use the results of muon transport through rock/water to generate muons in or around underground laboratory taking into account their energy spectrum and angular distribution.
Muon simulation codes MUSIC and MUSUN for underground physics
Kudryavtsev, V. A.
2009-03-01
The paper describes two Monte Carlo codes dedicated to muon simulations: MUSIC (MUon SImulation Code) and MUSUN (MUon Simulations UNderground). MUSIC is a package for muon transport through matter. It is particularly useful for propagating muons through large thickness of rock or water, for instance from the surface down to underground/underwater laboratory. MUSUN is designed to use the results of muon transport through rock/water to generate muons in or around underground laboratory taking into account their energy spectrum and angular distribution.
Park, K.; Ogino, T.; Lee, D.; Walker, R. J.; Kim, K.
2013-12-01
One of the significant problems in magnetospheric physics concerns the nature and properties of the processes which occur at the magnetopause boundary; in particular how energy, momentum, and plasma the magnetosphere receives from the solar wind. Basic processes are magnetic reconnection [Dungey, 1961] and viscouslike interaction, such as Kelvin-Helmholtz instability [Dungey 1955, Miura, 1984] and pressure-pulse driven [Sibeck et al. 1989]. In generally, magnetic reconnection occurs efficiently when the IMF is southward and the rate is largest where the magnetosheath magnetic field is antiparallel to the geomagnetic field. [Sonnerup, 1974; Crooker, 1979; Luhmann et al., 1984; Park et al., 2006, 2009]. The Kelvin-Helmholtz instability is driven by the velocity shear at the boundary, which occur frequently when the IMF is northward. Also variation of the magnetic field and the plasma properties is reported to be quasi-periodic with 2-3min [Otto and Fairfield, 2000] and period of vortex train with 3 to 4 minutes by global MHD simulation [Ogino, 2011]. The pressure-pulse is driven by the solar wind. And the observations of the magnetospheric magnetic field response show quasi-periodic with a period of 8 minutes [Sibeck et al., 1989; Kivelson and Chen, 1995]. There have been few studies of the vortices in the magnetospheric boundary under southward IMF condition. However it is not easy to find the generation mechanism and characteristic for vortices in complicated 3-dimensional space. Thus we have performed global MHD simulation for the steady solar wind and southward IMF conditions. From the simulation results, we find that the vortex occurs at R= 11.7Re (IMF Bz = -2 nT) and R= 10.2Re (IMF Bz = -10 nT) in the dayside magnetopause boundary. Also the vortex rotates counterclockwise in duskside magnetopause (clockwise in dawnside) and propagates tailward. Across the vortex, magnetic field and plasma properties clearly show quasi-periodic fluctuations with a period of 8
HADES, A Code for Simulating a Variety of Radiographic Techniques
Aufderheide, M B; Henderson, G; von Wittenau, A; Slone, D M; Barty, A; Martz, Jr., H E
2004-10-28
It is often useful to simulate radiographic images in order to optimize imaging trade-offs and to test tomographic techniques. HADES is a code that simulates radiography using ray tracing techniques. Although originally developed to simulate X-Ray transmission radiography, HADES has grown to simulate neutron radiography over a wide range of energy, proton radiography in the 1 MeV to 100 GeV range, and recently phase contrast radiography using X-Rays in the keV energy range. HADES can simulate parallel-ray or cone-beam radiography through a variety of mesh types, as well as through collections of geometric objects. HADES was originally developed for nondestructive evaluation (NDE) applications, but could be a useful tool for simulation of portal imaging, proton therapy imaging, and synchrotron studies of tissue. In this paper we describe HADES' current capabilities and discuss plans for a major revision of the code.
L-PICOLA: Fast dark matter simulation code
Howlett, Cullan; Manera, Marc; Percival, Will J.
2015-07-01
L-PICOLA generates and evolves a set of initial conditions into a dark matter field and can include primordial non-Gaussianity in the simulation and simulate the past lightcone at run-time, with optional replication of the simulation volume. It is a fast, distributed-memory, planar-parallel code. L-PICOLA is extremely useful for both current and next generation large-scale structure surveys.
Modane: A Design Support Tool for Numerical Simulation Codes
Lelandais Benoît
2016-07-01
Full Text Available The continual increasing power of supercomputers allows numerical simulation codes to take into account more complex physical phenomena. Therefore, physicists and mathematicians have to implement complex algorithms using cutting edge technologies and integrate them in large simulators. The CEA-DAM has been studying for several years the contribution of UML/MDE technologies in its simulators development cycle. The Modane application is one of the results of this work.
Advanced thermohydraulic simulation code for pool-type LMFBRs (SSC-P code)
Madni, I.K.; Cazzoli, E.G.
1980-09-01
Models for components and processes that are needed for simulation of thermohydraulic transient in a pool-type liquid metal fast breeder reactor (LMFBR) plant are described in this report. A computer code, SSC-P, has been developed as a part of the Super System Code (SSC) development project. A user's manual is being prepared as a separate document. 27 refs., 26 figs., 1 tab.
Mignone, A.; Flock, M.; Stute, M.; Kolb, S. M.; Muscianisi, G.
2012-09-01
Context. Explicit numerical computations of hypersonic or super-fast differentially rotating disks are subject to the time-step constraint imposed by the Courant condition, according to which waves cannot travel more than a fraction of a cell during a single time-step update. When the bulk orbital velocity largely exceeds any other wave speed (e.g., sound or Alfvén), as computed in the rest frame, the time step is considerably reduced and an unusually large number of steps may be necessary to complete the computation. Aims: We present a robust numerical scheme to overcome the Courant limitation by improving and extending the algorithm previously known as FARGO (fast advection in rotating gaseous objects) to the equations of magnetohydrodynamics (MHD) using a more general formalism. The proposed scheme conserves total angular momentum and energy to machine precision and works in cartesian, cylindrical, or spherical coordinates. The algorithm has been implemented in the next release of the PLUTO code for astrophysical gasdynamics and is suitable for local or global simulations of accretion or proto-planetary disk models. Methods: By decomposing the total velocity into an average azimuthal contribution and a residual term, the algorithm approaches the solution of the MHD equations through two separate steps corresponding to a linear transport operator in the direction of orbital motion and a standard nonlinear solver applied to the MHD equations written in terms of the residual velocity. Since the former step is not subject to any stability restriction, the Courant condition is computed only in terms of the residual velocity, leading to substantially larger time steps. The magnetic field is advanced in time using the constrained transport method in order to fulfill the divergence-free condition. Furthermore, conservation of total energy and angular momentum is enforced at the discrete level by properly expressing the source terms in terms of upwind Godunov fluxes
RAMSES-CH: A New Chemodynamical Code for Cosmological Simulations
Few, C. Gareth; Courty, Stephanie; Gibson, Brad K.; Kawata, Daisuke; Calura, Francesco; Teyssier, Romain
2012-01-01
We present a new chemodynamical code - Ramses-CH - for use in simulating the self-consistent evolution of chemical and hydrodynamical properties of galaxies within a fully cosmological framework. We build upon the adaptive mesh refinement code Ramses, which includes a treatment of self-gravity, hydrodynamics, star formation, radiative cooling, and supernovae feedback, to trace the dominant isotopes of C, N, O, Ne, Mg, Si, and Fe. We include the contribution of Type Ia and II supernovae, in ad...
RAMSES-CH: a new chemodynamical code for cosmological simulations
Few, C. G.; Courty, S.; Gibson, B. K.; Kawata, D; Calura, F.; Teyssier, R.
2012-01-01
We present a new chemodynamical code -RAMSES-CH- for use in simulating the self-consistent evolution of chemical and hydrodynamical properties of galaxies within a fully cosmological framework. We build upon the adaptive mesh refinement code RAMSES, which includes a treatment of self-gravity, hydrodynamics, star formation, radiative cooling and supernova feedback, to trace the dominant isotopes of C, N, O, Ne, Mg, Si and Fe. We include the contribution of Type Ia and Type II supernovae, in ad...
Denton, R.; Sonnerup, B. U. O.; Swisdak, M.; Birn, J.; Drake, J. F.; Heese, M.
2012-01-01
When analyzing data from an array of spacecraft (such as Cluster or MMS) crossing a site of magnetic reconnection, it is desirable to be able to accurately determine the orientation of the reconnection site. If the reconnection is quasi-two dimensional, there are three key directions, the direction of maximum inhomogeneity (the direction across the reconnection site), the direction of the reconnecting component of the magnetic field, and the direction of rough invariance (the "out of plane" direction). Using simulated spacecraft observations of magnetic reconnection in the geomagnetic tail, we extend our previous tests of the direction-finding method developed by Shi et al. (2005) and the method to determine the structure velocity relative to the spacecraft Vstr. These methods require data from four proximate spacecraft. We add artificial noise and calibration errors to the simulation fields, and then use the perturbed gradient of the magnetic field B and perturbed time derivative dB/dt, as described by Denton et al. (2010). Three new simulations are examined: a weakly three-dimensional, i.e., quasi-two-dimensional, MHD simulation without a guide field, a quasi-two-dimensional MHD simulation with a guide field, and a two-dimensional full dynamics kinetic simulation with inherent noise so that the apparent minimum gradient was not exactly zero, even without added artificial errors. We also examined variations of the spacecraft trajectory for the kinetic simulation. The accuracy of the directions found varied depending on the simulation and spacecraft trajectory, but all the directions could be found within about 10 for all cases. Various aspects of the method were examined, including how to choose averaging intervals and the best intervals for determining the directions and velocity. For the kinetic simulation, we also investigated in detail how the errors in the inferred gradient directions from the unmodified Shi et al. method (using the unperturbed gradient
Nexus: A modular workflow management system for quantum simulation codes
Krogel, Jaron T.
2016-01-01
The management of simulation workflows represents a significant task for the individual computational researcher. Automation of the required tasks involved in simulation work can decrease the overall time to solution and reduce sources of human error. A new simulation workflow management system, Nexus, is presented to address these issues. Nexus is capable of automated job management on workstations and resources at several major supercomputing centers. Its modular design allows many quantum simulation codes to be supported within the same framework. Current support includes quantum Monte Carlo calculations with QMCPACK, density functional theory calculations with Quantum Espresso or VASP, and quantum chemical calculations with GAMESS. Users can compose workflows through a transparent, text-based interface, resembling the input file of a typical simulation code. A usage example is provided to illustrate the process.
Tesileanu, O; Massaglia, S
2008-01-01
Time-dependent cooling processes are of paramount importance in the evolution of astrophysical gaseous nebulae and, in particular, when radiative shocks are present. The present work introduces a necessary set of tools that can be used to model radiative astrophysical flows in the optically-thin plasma limit. We aim to provide reliable and accurate predictions of emission line ratios and radiative cooling losses in astrophysical simulations of shocked flows. Moreover, we discuss numerical implementation aspects to ease future improvements and implementation in other MHD numerical codes. The most important source of radiative cooling for our plasma conditions comes from the collisionally-excited line radiation. We evolve a chemical network, including 29 ion species, to compute the ionization balance in non-equilibrium conditions. After a series of validations and tests, typical astrophysical setups are simulated in 1D and 2D, employing both the present cooling model and a simplified one. The influence of the c...
Problems in nonlinear resistive MHD
Turnbull, A.D.; Strait, E.J.; La Haye, R.J.; Chu, M.S.; Miller, R.L. [General Atomics, San Diego, CA (United States)
1998-12-31
Two experimentally relevant problems can relatively easily be tackled by nonlinear MHD codes. Both problems require plasma rotation in addition to the nonlinear mode coupling and full geometry already incorporated into the codes, but no additional physics seems to be crucial. These problems discussed here are: (1) nonlinear coupling and interaction of multiple MHD modes near the B limit and (2) nonlinear coupling of the m/n = 1/1 sawtooth mode with higher n gongs and development of seed islands outside q = 1.
Van der Swaluw, E
2003-01-01
Magnetohydrodynamical simulations are presented of a magnetized pulsar wind interacting directly with the interstellar medium, or, in the case of a surrounding supernova remnant, with the associated freely expanding ejecta of the progenitor star. In both cases the simulations show that the pulsar wind nebula will be elongated due to the dynamical influence of the toroidal magnetic fields, which confirm predictions from a semi-analytical model presented by Begelman & Li. The simulations follow the expansion of the pulsar wind nebula when the latter is bounded by a strong shock and show that the expansion can be modeled with a standard power-law expansion rate. By performing different simulations with different magnetization parameters, I show that the latter weakly correlates with the elongation of the pulsar wind nebula. The results from the simulations are applied to determine the nature of the expansion rate of the pulsar wind nebula 3C58. It is shown that there is both observational and theoretical evi...
Tchekhovskoy, Alexander
2015-01-01
Active galactic nuclei jets are thought to form in the immediate vicinity of the event horizons of supermassive black holes. Therefore, jets could be excellent probes of general relativity. However, in practice, using jets to infer near-black hole physics is not straightforward since the cause of their most basic morphological features is not understood. For instance, there is no agreement on the cause of the well-known Fanaroff-Riley (FR) morphological dichotomy of jets, with FRI jets being shorter and wiggly and FRII jets being longer and more stable. Here, we carry out 3D relativistic magnetohydrodynamic (MHD) simulations of relativistic jets propagating through the ambient medium. Because in flat density cores of galaxies ($n \\propto r^{-\\alpha}$ with $\\alpha < 2$) the mass per unit distance ahead of the jets increases with distance, the jets slow down and collimate into smaller opening angles. This makes the jets more vulnerable to the 3D magnetic kink ("corkscrew") instability, which develops faster ...
Wu, Chin-Chun; Liou, Kan; Wu, S. T.; Dryer, Murray; Plunkett, Simon
2016-03-01
We study an unusual solar energetic particle (SEP) event that was associated with the coronal mass ejection (CME) on March 15, 2013. Enhancements of the SEP fluxes were first detected by the ACE spacecraft at 14:00 UT, ˜7 hours after the onset of the CME (07:00 UT), and the SEP's peak intensities were recorded ˜36 hours after the onset of the CME. Our recent study showed that the CME-driven shock Mach number, based on a global three-dimensional (3-D) magnetohydrodynamic (MHD) simulation, is well correlated with the time-intensity of 10-30 MeV and 30-80 MeV protons. Here we focus on the radial dependence (r-α) of 4He (3.43-41.2 MeV/n) and O (7.30-89.8 MeV/n) energetic particles from ACE/SIS. It is found that the scaling factor (α) ranges between 2 and 4 for most of the energy channels. We also found that the correlation coefficients tend to increase with SEP energies.
Dolag, Klaus; Beck, Alexander M.; Arth, Alexander
Using the MHD version of Gadget3 (Stasyszyn, Dolag & Beck 2013) and a model for the seeding of magnetic fields by supernovae (SN), we performed simulations of the evolution of the magnetic fields in galaxy clusters and study their effects on the heat transport within the intra cluster medium (ICM). This mechanism - where SN explosions during the assembly of galaxies provide magnetic seed fields - has been shown to reproduce the magnetic field in Milky Way-like galactic halos (Beck et al. 2013). The build up of the magnetic field at redshifts before z = 5 and the accordingly predicted rotation measure evolution are also in good agreement with current observations. Such magnetic fields present at high redshift are then transported out of the forming protogalaxies into the large-scale structure and pollute the ICM (in a similar fashion to metals transport). Here, complex velocity patterns, driven by the formation process of cosmic structures are further amplifying and distributing the magnetic fields. In galaxy clusters, the magnetic fields therefore get amplified to the observed μG level and produce the observed amplitude of rotation measures of several hundreds of rad/m2. We also demonstrate that heat conduction in such turbulent fields on average is equivalent to a suppression factor around 1/20th of the classical Spitzer value and in contrast to classical, isotropic heat transport leads to temperature structures within the ICM compatible with observations (Arth et al. 2014).
Westerhof, E.; de Blank, H. J.; Pratt, J.
2016-03-01
Two dimensional reduced MHD simulations of neoclassical tearing mode growth and suppression by ECCD are performed. The perturbation of the bootstrap current density and the EC drive current density perturbation are assumed to be functions of the perturbed flux surfaces. In the case of ECCD, this implies that the applied power is flux surface averaged to obtain the EC driven current density distribution. The results are consistent with predictions from the generalized Rutherford equation using common expressions for Δ \\text{bs}\\prime and Δ \\text{ECCD}\\prime . These expressions are commonly perceived to describe only the effect on the tearing mode growth of the helical component of the respective current perturbation acting through the modification of Ohm’s law. Our results show that they describe in addition the effect of the poloidally averaged current density perturbation which acts through modification of the tearing mode stability index. Except for modulated ECCD, the largest contribution to the mode growth comes from this poloidally averaged current density perturbation.
Ade, P A R; Alves, M I R; Aniano, G; Armitage-Caplan, C; Arnaud, M; Arzoumanian, D; Ashdown, M; Atrio-Barandela, F; Aumont, J; Baccigalupi, C; Banday, A J; Barreiro, R B; Battaner, E; Benabed, K; Benoit-Lévy, A; Bernard, J -P; Bersanelli, M; Bielewicz, P; Bond, J R; Borrill, J; Bouchet, F R; Boulanger, F; Bracco, A; Burigana, C; Cardoso, J -F; Catalano, A; Chamballu, A; Chiang, H C; Christensen, P R; Colombi, S; Colombo, L P L; Combet, C; Couchot, F; Coulais, A; Crill, B P; Curto, A; Cuttaia, F; Danese, L; Davies, R D; Davis, R J; de Bernardis, P; de Rosa, A; de Zotti, G; Delabrouille, J; Dickinson, C; Diego, J M; Donzelli, S; Doré, O; Douspis, M; Dupac, X; Enßlin, T A; Eriksen, H K; Falgarone, E; Fanciullo, L; Ferrière, K; Finelli, F; Forni, O; Frailis, M; Fraisse, A A; Franceschi, E; Galeotta, S; Ganga, K; Ghosh, T; Giard, M; Giraud-Héraud, Y; González-Nuevo, J; Górski, K M; Gregorio, A; Gruppuso, A; Guillet, V; Hansen, F K; Harrison, D L; Helou, G; Hernández-Monteagudo, C; Hildebrandt, S R; Hivon, E; Hobson, M; Holmes, W A; Hornstrup, A; Huffenberger, K M; Jaffe, A H; Jaffe, T R; Jones, W C; Juvela, M; Keihänen, E; Keskitalo, R; Kisner, T S; Kneissl, R; Knoche, J; Kunz, M; Kurki-Suonio, H; Lagache, G; Lamarre, J -M; Lasenby, A; Lawrence, C R; Leonardi, R; Levrier, F; Liguori, M; Lilje, P B; Linden-Vørnle, M; López-Caniego, M; Lubin, P M; Macías-Pérez, J F; Maino, D; Mandolesi, N; Maris, M; Marshall, D J; Martin, P G; Martínez-González, E; Masi, S; Matarrese, S; Mazzotta, P; Melchiorri, A; Mendes, L; Mennella, A; Migliaccio, M; Miville-Deschênes, M -A; Moneti, A; Montier, L; Morgante, G; Mortlock, D; Munshi, D; Murphy, J A; Naselsky, P; Nati, F; Natoli, P; Netterfield, C B; Noviello, F; Novikov, D; Novikov, I; Oxborrow, C A; Pagano, L; Pajot, F; Paoletti, D; Pasian, F; Pelkonen, V -M; Perdereau, O; Perotto, L; Perrotta, F; Piacentini, F; Piat, M; Pietrobon, D; Plaszczynski, S; Pointecouteau, E; Polenta, G; Popa, L; Pratt, G W; Prunet, S; Puget, J -L; Rachen, J P; Reinecke, M; Remazeilles, M; Renault, C; Ricciardi, S; Riller, T; Ristorcelli, I; Rocha, G; Rosset, C; Roudier, G; Rusholme, B; Sandri, M; Scott, D; Soler, J D; Spencer, L D; Stolyarov, V; Stompor, R; Sudiwala, R; Sutton, D; Suur-Uski, A -S; Sygnet, J -F; Tauber, J A; Terenzi, L; Toffolatti, L; Tomasi, M; Tristram, M; Tucci, M; Umana, G; Valenziano, L; Valiviita, J; Van Tent, B; Vielva, P; Villa, F; Wade, L A; Wandelt, B D; Zonca, A
2014-01-01
Polarized emission observed by Planck HFI at 353 GHz towards a sample of nearby fields is presented, focusing on the statistics of polarization fractions $p$ and angles $\\psi$. The polarization fractions and column densities in these nearby fields are representative of the range of values obtained over the whole sky. We find that: (i) the largest polarization fractions are reached in the most diffuse fields; (ii) the maximum polarization fraction $p_\\mathrm{max}$ decreases with column density $N_\\mathrm{H}$ in the more opaque fields with $N_\\mathrm{H} > 10^{21}\\,\\mathrm{cm}^{-2}$; and (iii) the polarization fraction along a given line of sight is correlated with the local spatial coherence of the polarization angle. These observations are compared to polarized emission maps computed in simulations of anisotropic magnetohydrodynamical (MHD) turbulence in which we assume a uniform intrinsic polarization fraction of the dust grains. We find that an estimate of this parameter may be recovered from the maximum pol...
Extended MHD Effects in High Energy Density Experiments
Seyler, Charles
2016-10-01
The MHD model is the workhorse for computational modeling of HEDP experiments. Plasma models are inheritably limited in scope, but MHD is expected to be a very good model for studying plasmas at the high densities attained in HEDP experiments. There are, however, important ways in which MHD fails to adequately describe the results, most notably due to the omission of the Hall term in the Ohm's law (a form of extended MHD or XMHD). This talk will discuss these failings by directly comparing simulations of MHD and XMHD for particularly relevant cases. The methodology is to simulate HEDP experiments using a Hall-MHD (HMHD) code based on a highly accurate and robust Discontinuous Galerkin method, and by comparison of HMHD to MHD draw conclusions about the impact of the Hall term. We focus on simulating two experimental pulsed power machines under various scenarios. We examine the MagLIF experiment on the Z-machine at Sandia National Laboratories and liner experiments on the COBRA machine at Cornell. For the MagLIF experiment we find that power flow in the feed leads to low density plasma ablation into the region surrounding the liner. The inflow of this plasma compresses axial magnetic flux onto the liner. In MHD this axial flux tends to resistively decay, whereas in HMHD a force-free current layer sustains the axial flux on the liner leading to a larger ratio of axial to azimuthal flux. During the liner compression the magneto-Rayleigh-Taylor instability leads to helical perturbations due to minimization of field line bending. Simulations of a cylindrical liner using the COBRA machine parameters can under certain conditions exhibit amplification of an axial field due to a force-free low-density current layer separated by some distance from the liner. This results in a configuration in which there is predominately axial field on the liner inside the current layer and azimuthal field outside the layer. We are currently attempting to experimentally verify the simulation
A new MHD-assisted Stokes inversion technique
Riethmüller, T L; Barthol, P; Gandorfer, A; Gizon, L; Hirzberger, J; van Noort, M; Rodríguez, J Blanco; Iniesta, J C Del Toro; Suárez, D Orozco; Schmidt, W; Pillet, V Martínez; Knölker, M
2016-01-01
We present a new method of Stokes inversion of spectropolarimetric data and evaluate it by taking the example of a SUNRISE/IMaX observation. An archive of synthetic Stokes profiles is obtained by the spectral synthesis of state-of-the-art magnetohydrodynamics (MHD) simulations and a realistic degradation to the level of the observed data. The definition of a merit function allows the archive to be searched for the synthetic Stokes profiles that match the observed profiles best. In contrast to traditional Stokes inversion codes, which solve the Unno-Rachkovsky equations for the polarized radiative transfer numerically and fit the Stokes profiles iteratively, the new technique provides the full set of atmospheric parameters. This gives us the ability to start an MHD simulation that takes the inversion result as initial condition. After a relaxation process of half an hour solar time we obtain physically consistent MHD data sets with a target similar to the observation. The new MHD simulation is used to repeat t...
Maestro and Castro: Simulation Codes for Astrophysical Flows
Zingale, Michael; Almgren, Ann; Beckner, Vince; Bell, John; Friesen, Brian; Jacobs, Adam; Katz, Maximilian P.; Malone, Christopher; Nonaka, Andrew; Zhang, Weiqun
2017-01-01
Stellar explosions are multiphysics problems—modeling them requires the coordinated input of gravity solvers, reaction networks, radiation transport, and hydrodynamics together with microphysics recipes to describe the physics of matter under extreme conditions. Furthermore, these models involve following a wide range of spatial and temporal scales, which puts tough demands on simulation codes. We developed the codes Maestro and Castro to meet the computational challenges of these problems. Maestro uses a low Mach number formulation of the hydrodynamics to efficiently model convection. Castro solves the fully compressible radiation hydrodynamics equations to capture the explosive phases of stellar phenomena. Both codes are built upon the BoxLib adaptive mesh refinement library, which prepares them for next-generation exascale computers. Common microphysics shared between the codes allows us to transfer a problem from the low Mach number regime in Maestro to the explosive regime in Castro. Importantly, both codes are freely available (https://github.com/BoxLib-Codes). We will describe the design of the codes and some of their science applications, as well as future development directions.Support for development was provided by NSF award AST-1211563 and DOE/Office of Nuclear Physics grant DE-FG02-87ER40317 to Stony Brook and by the Applied Mathematics Program of the DOE Office of Advance Scientific Computing Research under US DOE contract DE-AC02-05CH11231 to LBNL.
Simulating magnetised plasma with the versatile advection code
Keppens, R.; Toth, G.; Palma, J. M. L.; Dongarra, J.; Hernandez, V.
1999-01-01
Matter in the universe mainly consists of plasma. The dynamics of plasmas is controlled by magnetic fields. To simulate the evolution of magnetised plasma, we solve the equations of magnetohydrodynamics using the Versatile Advection Code (VAC). To demonstrate the versatility of VAC, we present calcu
Simulating magnetised plasma with the versatile advection code
Keppens, R.; Toth, G.; Palma, J. M. L.; Dongarra, J.; Hernandez, V.
1999-01-01
Matter in the universe mainly consists of plasma. The dynamics of plasmas is controlled by magnetic fields. To simulate the evolution of magnetised plasma, we solve the equations of magnetohydrodynamics using the Versatile Advection Code (VAC). To demonstrate the versatility of VAC, we present
3-D MHD disk wind simulations of jets and outflows from high-mass protostars
Staff, Jan E.; Tanaka, Kei; Tan, Jonathan C.; Zhang, Yichen; Liu, Mengyao
2017-01-01
We present the results of a series of nested, large scale, three-dimensional magnetohydrodynamics simulations of disk winds with a Blandford-Payne like magnetic field configuration, resolving scales from the stellar surface to beyond the core. The goal is to understand the structure of massive protostellar cores at various stages of their formation as the protostellar mass grows from a massive core. At each stage of a given protostellar mass, first, we study how jets and winds develop from the inner accretion disk to ~100 AU scales. We use the results from these simulations to dictate the inner boundary condition of a set of simulation extending to the core boundary at ~10,000 AU of an initially 60 solar mass core. We run separate simulations where the protostellar mass is 1, 2, 4, 8, 12, 16, and 24 Msun, and we are working on making a small grid of models in the context of the Turbulent Core Model with three different core masses and three different core surface densities. The wind is blown into the simulation box with properties derived from the previous jet simulations. We examine the opening angle of the outflow cavity and thus the star formation efficiency from the core due to outflow feedback. We find that the opening angle increases as the protostellar mass grows, but it is always less than 10 degrees, which is surprisingly small compared with previous analytic models. This is caused by the core which confines the outflow. Finally, we use our simulation results as input to a radiative transfer calculation, to compare with observations made by the SOMA survey.
Ju, Wenhua; Stone, James M.; Zhu, Zhaohuan
2017-05-01
We perform global three-dimensional MHD simulations of unstratified accretion disks in cataclysmic variables (CVs). By including mass inflow via an accretion stream, we are able to evolve the disk to a steady state. We investigate the relative importance of spiral shocks and the magnetorotational instability (MRI) in driving angular momentum transport and how each depend on the geometry and strength of the seed magnetic field and the Mach number of the disk (where Mach number is the ratio of the azimuthal velocity and the sound speed of gas). We use a locally isothermal equation of state and adopt temperature profiles that are consistent with CV disk observations. Our results indicate that the relative importance of spiral shocks and MRI in driving angular momentum transport is controlled by the gas Mach number and the seed magnetic field strength. MRI and spiral shocks provide comparable efficiency of angular momentum transport when the disk Mach number is around 10 and the seed magnetic field has plasma β =400 (where β is the ratio of gas pressure and magnetic pressure). The MRI dominates whenever the seed field strength, or the disk Mach number, is increased. Among all of our simulations, the effective viscosity parameter {α }{eff}˜ 0.016{--}0.1 after MRI saturates and the disk reaches steady state. Larger values of {α }{eff} are favored when the seed magnetic field has vertical components or the flow has stronger magnetization (1/β ). Our models all indicate that the role of MRI in driving angular momentum transport thus mass accretion in CV disks is indispensable, especially in cool disks with weak spiral shocks.
Evolution of cosmic filaments and of their galaxy population from MHD cosmological simulations
Gheller, Claudio; Brueggen, Marcus; Alpaslan, Mehmet; Holwerda, Benne Willem; Hopkins, Andrew; Liske, Jochen
2016-01-01
Despite containing about a half of the total matter in the Universe, at most wavelengths the filamentary structure of the cosmic web is difficult to observe. In this work, we use large unigrid cosmological simulations to investigate how the geometrical, thermodynamical and magnetic properties of cosmological filaments vary with mass and redshift (z $\\leq 1$). We find that the average temperature, length, volume and magnetic field of filaments are tightly log-log correlated with the underlying total gravitational mass. This reflects the role of self-gravity in shaping their properties and enables statistical predictions of their observational properties based on their mass. We also focus on the properties of the simulated population of galaxy-sized halos within filaments, and compare their properties to the results obtained from the spectroscopic GAMA survey. Simulated and observed filaments with the same length are found to contain an equal number of galaxies, with very similar distribution of halo masses. Th...
Secondary Models for Radio Mini-Halos in Galaxy Clusters with MHD Simulations of Gas Sloshing
ZuHone, John; Giacintucci, Simona; Markevitch, Maxim
2014-01-01
We present simulations of a radio minihalo in a galaxy cluster core with sloshing cold fronts, under the assumption that the source of the synchrotron-emitting electrons is hadronic interactions between cosmic-ray protons with the thermal intracluster gas. This is an alternative to the hypothesis where the cosmic ray electrons are reaccelerated by the intracluster turbulence, which we have discussed in an earlier work. We follow the evolution of cosmic-ray electron spectra associated with passive tracer particles, taking into account the time-dependent injection of new electrons from the hadronic interactions and energy losses along each particle's trajectory. We then simulate the radio emission from these particles. The drop in radio emission at the cold front surfaces is less prominent than that in our previous simulations, based on electron reacceleration from sloshing-induced turbulence, where the emission is definitively confined to the regions within cold fronts. The result is that the emission is overa...
MHD simulations reveal crucial differences between solar and very-cool star magnetic structures
Beeck, Benjamin; Reiners, Ansgar
2011-01-01
We carried out 3D radiative magnetohydrodynamic simulations of the convective and magnetic structure in the surface layers (uppermost part of the convection zone and photosphere) of main-sequence stars of spectral types F3 to M2. The simulation results were analyzed in terms of sizes and properties of the convection cells (granules) and magnetic flux concentrations as well as velocity, pressure, density, and temperature profiles. Our numerical simulations show for the first time a qualitative difference in the magneto-convection between solar-like stars and M dwarfs. Owing to higher surface gravity, lower opacity (resulting in higher density at optical depth unity), and more stable downflows, small-scale magnetic structures concentrate into pore-like configurations of reduced intensity. This implies that in very cool stars magnetic surface structures like plage regions and starspots significantly differ from the solar example. Such a difference would have major impact on the interpretation of Doppler imaging ...
Tanuma, S; Kudoh, T; Shibata, K; Tanuma, Syuniti; Yokoyama, Takaaki; Kudoh, Takahiro; Shibata, Kazunari
2001-01-01
We examine the magnetic reconnection triggered by a supernova (or a point explosion) in interstellar medium, by performing two-dimensional resistive magnetohydrodynamic (MHD) numerical simulations with high spatial resolution. We found that the magnetic reconnection starts long after a supernova shock (fast-mode MHD shock) passes a current sheet. The current sheet evolves as follows: (i) Tearing-mode instability is excited by the supernova shock, and the current sheet becomes thin in its nonlinear stage. (ii) The current-sheet thinning is saturated when the current-sheet thickness becomes comparable to that of Sweet-Parker current sheet. After that, Sweet-Parker type reconnection starts, and the current-sheet length increases. (iii) ``Secondary tearing-mode instability'' occurs in the thin Sweet-Parker current sheet. (iv) As a result, further current-sheet thinning occurs and anomalous resistivity sets in, because gas density decreases in the current sheet. Petschek type reconnection starts and heats interste...
Visualization of the Flux Rope Generation Process Using Large Quantities of MHD Simulation Data
Y Kubota
2013-03-01
Full Text Available We present a new concept of analysis using visualization of large quantities of simulation data. The time development of 3D objects with high temporal resolution provides the opportunity for scientific discovery. We visualize large quantities of simulation data using the visualization application 'Virtual Aurora' based on AVS (Advanced Visual Systems and the parallel distributed processing at "Space Weather Cloud" in NICT based on Gfarm technology. We introduce two results of high temporal resolution visualization: the magnetic flux rope generation process and dayside reconnection using a system of magnetic field line tracing.
2D Implosion Simulations with a Kinetic Particle Code
Sagert, Irina; Strother, Terrance T
2016-01-01
We perform two-dimensional (2D) implosion simulations using a Monte Carlo kinetic particle code. The paper is motivated by the importance of non-equilibrium effects in inertial confinement fusion (ICF) capsule implosions. These cannot be fully captured by hydrodynamic simulations while kinetic methods, as the one presented in this study, are able to describe continuum and rarefied regimes within one approach. In the past, our code has been verified via traditional shock wave and fluid instability simulations. In the present work, we focus on setups that are closer to applications in ICF. We perform simple 2D disk implosion simulations using one particle species. The obtained results are compared to simulations using the hydrodynamics code RAGE. In a first study, the implosions are powered by energy deposition in the outer layers of the disk. We test the impact of the particle mean-free-path and find that while the width of the implosion shock broadens, its location as a function of time remains very similar. ...
Computed radiography simulation using the Monte Carlo code MCNPX
Correa, S.C.A. [Programa de Engenharia Nuclear/COPPE, Universidade Federal do Rio de Janeiro, Ilha do Fundao, Caixa Postal 68509, 21945-970, Rio de Janeiro, RJ (Brazil); Centro Universitario Estadual da Zona Oeste (CCMAT)/UEZO, Av. Manuel Caldeira de Alvarenga, 1203, Campo Grande, 23070-200, Rio de Janeiro, RJ (Brazil); Souza, E.M. [Programa de Engenharia Nuclear/COPPE, Universidade Federal do Rio de Janeiro, Ilha do Fundao, Caixa Postal 68509, 21945-970, Rio de Janeiro, RJ (Brazil); Silva, A.X., E-mail: ademir@con.ufrj.b [PEN/COPPE-DNC/Poli CT, Universidade Federal do Rio de Janeiro, Ilha do Fundao, Caixa Postal 68509, 21945-970, Rio de Janeiro, RJ (Brazil); Cassiano, D.H. [Instituto de Radioprotecao e Dosimetria/CNEN Av. Salvador Allende, s/n, Recreio, 22780-160, Rio de Janeiro, RJ (Brazil); Lopes, R.T. [Programa de Engenharia Nuclear/COPPE, Universidade Federal do Rio de Janeiro, Ilha do Fundao, Caixa Postal 68509, 21945-970, Rio de Janeiro, RJ (Brazil)
2010-09-15
Simulating X-ray images has been of great interest in recent years as it makes possible an analysis of how X-ray images are affected owing to relevant operating parameters. In this paper, a procedure for simulating computed radiographic images using the Monte Carlo code MCNPX is proposed. The sensitivity curve of the BaFBr image plate detector as well as the characteristic noise of a 16-bit computed radiography system were considered during the methodology's development. The results obtained confirm that the proposed procedure for simulating computed radiographic images is satisfactory, as it allows obtaining results comparable with experimental data.
Enhanced Verification Test Suite for Physics Simulation Codes
Kamm, J R; Brock, J S; Brandon, S T; Cotrell, D L; Johnson, B; Knupp, P; Rider, W; Trucano, T; Weirs, V G
2008-10-10
This document discusses problems with which to augment, in quantity and in quality, the existing tri-laboratory suite of verification problems used by Los Alamos National Laboratory (LANL), Lawrence Livermore National Laboratory (LLNL), and Sandia National Laboratories (SNL). The purpose of verification analysis is demonstrate whether the numerical results of the discretization algorithms in physics and engineering simulation codes provide correct solutions of the corresponding continuum equations. The key points of this document are: (1) Verification deals with mathematical correctness of the numerical algorithms in a code, while validation deals with physical correctness of a simulation in a regime of interest. This document is about verification. (2) The current seven-problem Tri-Laboratory Verification Test Suite, which has been used for approximately five years at the DOE WP laboratories, is limited. (3) Both the methodology for and technology used in verification analysis have evolved and been improved since the original test suite was proposed. (4) The proposed test problems are in three basic areas: (a) Hydrodynamics; (b) Transport processes; and (c) Dynamic strength-of-materials. (5) For several of the proposed problems we provide a 'strong sense verification benchmark', consisting of (i) a clear mathematical statement of the problem with sufficient information to run a computer simulation, (ii) an explanation of how the code result and benchmark solution are to be evaluated, and (iii) a description of the acceptance criterion for simulation code results. (6) It is proposed that the set of verification test problems with which any particular code be evaluated include some of the problems described in this document. Analysis of the proposed verification test problems constitutes part of a necessary--but not sufficient--step that builds confidence in physics and engineering simulation codes. More complicated test cases, including physics models of
MHD Simulations of AGN Jets in a Dynamic Galaxy Cluster Medium
Mendygral, Peter; Dolag, Klaus
2012-01-01
We present a pair of 3-d magnetohydrodynamical simulations of intermittent jets from a central active galactic nucleus (AGN) in a galaxy cluster extracted from a high resolution cosmological simulation. The selected cluster was chosen as an apparently relatively relaxed system, not having undergone a major merger in almost 7 Gyr. Despite this characterization and history, the intra-cluster medium (ICM) contains quite active "weather". We explore the effects of this ICM weather on the morphological evolution of the AGN jets and lobes. The orientation of the jets is different in the two simulations so that they probe different aspects of the ICM structure and dynamics. We find that even for this cluster that can be characterized as relaxed by an observational standard, the large-scale, bulk ICM motions can significantly distort the jets and lobes. Synthetic X-ray observations of the simulations show that the jets produce complex cavity systems, while synthetic radio observations reveal bending of the jets and l...
Coronal Mass Ejections and Dimmings: A Comparative Study using MHD Simulations and SDO Observations
Jin, Meng; Cheung, Mark; DeRosa, Marc L.; Nitta, Nariaki; Schrijver, Karel
2017-08-01
Solar coronal dimmings have been observed extensively in the past two decades. Due to their close association with coronal mass ejections (CMEs), there is a critical need to improve our understanding of the physical processes that cause dimmings and determine their relationship with CMEs. In this study, we investigate coronal dimmings by combining simulation and observational efforts. By utilizing a data-driven global magnetohydrodynamics model (AWSoM: Alfven-wave Solar Model), we simulate coronal dimmings resulting from different CME energetics and flux rope configurations. We synthesize the emissions of different EUV spectral bands/lines and compare with SDO/AIA and EVE observations. A detailed analysis of simulation and observation data suggests that the “core” dimming is mainly caused by the mass loss from the CME, while the “remote” dimming could have a different origin (e.g., plasma heating). Moreover, the interaction between the erupting flux rope with different orientations and the global solar corona could significantly influence the coronal dimming patterns. Using metrics such as dimming depth, dimming slope, and recovery time, we investigate the relationship between dimmings and CME properties (e.g., CME mass, CME speed) in the simulation. Our result suggests that coronal dimmings encode important information about CMEs. We also discuss how our knowledge about solar coronal dimmings could be extended to the study of stellar CMEs.
Radiation-MHD simulations of pillars and globules in HII regions
Mackey, Jonathan
2012-01-01
Implicit and explicit raytracing-photoionisation algorithms have been implemented in the author's radiation-magnetohydrodynamics code. The algorithms are described briefly and their efficiency and parallel scaling are investigated. The implicit algorithm is more efficient for calculations where ionisation fronts have very supersonic velocities, and the explicit algorithm is favoured in the opposite limit because of its better parallel scaling. The implicit method is used to investigate the effects of initially uniform magnetic fields on the formation and evolution of dense pillars and cometary globules at the boundaries of HII regions. It is shown that for weak and medium field strengths an initially perpendicular field is swept into alignment with the pillar during its dynamical evolution, matching magnetic field observations of the`Pillars of Creation' in M16. A strong perpendicular magnetic field remains in its initial configuration and also confines the photoevaporation flow into a bar-shaped, dense, ioni...
A Systematic Look at Code Performance and System Simulation
G.Srikanth
2014-06-01
Full Text Available The most standard method in improvise a system’s efficiency in Digital communication is channel coding but this methods is not been able to extend its features for high speed links. Growing demands in network speeds are placing a large burden on the energy efficiency of high-speed links and render the benefit of channel coding for these systems a timely subject. The low error rates of interest and the presence of residual inter-symbol interference (ISI caused by hardware constraints impede the analysis and simulation of coded high-speed links. Focusing on the residual ISI and collective noise as the dominant error mechanisms, this paper analyzes error correlation through concepts of error region, channel signature, and correlation distance. This framework provides a deeper insight into joint error behaviors in high-speed links, extends the range of statistical simulation for coded high-speed links, and provides a case against the use of biased Monte Carlo methods in this setting. Finally, based on a hardware test bed, the performance of standard binary forward error correction and error detection schemes is evaluated, from which recommendations on coding for high-speed links are derived. Keywords:
Double-cusp simulation during northward IMF using 3D PIC global code
Esmaeili, Amin; Kalaee, Mohammad Javad
2017-07-01
The cusp has important effects on the transportation of particles and their energy from the solar wind to the magnetosphere, and ionosphere, and high-altitude atmosphere. The cusp can be considered to be a part of the magnetospheric boundary layer with weaker magnetic fields. It has been studied since 1971 by different satellite observations. Despite many years of investigation, some problems, such as the boundaries, shapes, and method of construction, remain to be solved. The double cusp was first reported by Wing using the observation of the DMSP satellite. He also compared the results of observations with the results of a 2D MHD simulation. In this study, by performing simulations and analyzing the results, we report the observation of a V-shaped double-cusp structure under the northward Interplanetary Magnetic Field (IMF). In our simulation, the double cusp was seen only for electrons, although a weak double cusp was observed for ions as well. We showed that this double cusp occurred because of electron precipitation from different sources of solar wind and magnetosphere with different magnetic field strengths. In previous studies of the double cusp, there were debates on its spatial structure or on its temporal behavior due to the cusp movement caused by the sharp solar wind effects on the magnetosphere shape. Here we report the spatial detection of the double cusp similar to the one observed by the DMSP satellite, but for the northward IMF case. Also, we investigate the asymmetry along the dawn-dusk side of the magnetosphere using our 3D PIC simulation code.
Magnetohydrodynamics simulations on graphics processing units
Wong, Hon-Cheng; Feng, Xueshang; Tang, Zesheng
2009-01-01
Magnetohydrodynamics (MHD) simulations based on the ideal MHD equations have become a powerful tool for modeling phenomena in a wide range of applications including laboratory, astrophysical, and space plasmas. In general, high-resolution methods for solving the ideal MHD equations are computationally expensive and Beowulf clusters or even supercomputers are often used to run the codes that implemented these methods. With the advent of the Compute Unified Device Architecture (CUDA), modern graphics processing units (GPUs) provide an alternative approach to parallel computing for scientific simulations. In this paper we present, to the authors' knowledge, the first implementation to accelerate computation of MHD simulations on GPUs. Numerical tests have been performed to validate the correctness of our GPU MHD code. Performance measurements show that our GPU-based implementation achieves speedups of 2 (1D problem with 2048 grids), 106 (2D problem with 1024^2 grids), and 43 (3D problem with 128^3 grids), respec...
Relativistic Klystron Two-Beam Accelerator Simulation Code Development
Lidia, Steven; Ryne, Robert
1997-05-01
We present recent work on the development and testing of a 3-D simu- lation code for relativistic klystron two-beam accelerators (RK-TBAs). This new code utilizes symplectic integration techniques to push macro- particles, coupled to a circuit equation framework that advances the fields in the cavities. Space charge effects are calculated using a Green's function approach, and pipe wall effects are included in the electrostatic approximation. We present simulations of the LBNL/LLNL RK-TBA device, emphasizing cavity power development and beam dynamics, including the high- and low-frequency beam break-up instabilities.
Observational evidence of CMEs interacting in the inner heliosphere as inferred from MHD simulations
Lugaz, N; Roussev, I I; Gombosi, T I
2008-01-01
The interaction of multiple Coronal Mass Ejections (CMEs) has been observed by LASCO coronagraphs and by near-Earth spacecraft, and it is thought to be an important cause of geo-effective storms, large Solar Energetic Particles events and intense Type II radio bursts. New and future missions such as STEREO, the LWS Sentinels, and the Solar Orbiter will provide additional observations of the interaction of multiple CMEs between the Sun and the Earth. We present the results of simulations of two and more CMEs interacting in the inner heliosphere performed with the Space Weather Modeling Framework (SWMF). Based on those simulations, we discuss the observational evidence of the interaction of multiple CMEs, both in situ and from coronagraphs. The clearest evidence of the interaction of the CMEs are the large temperature in the sheath, due to the shocks merging, and the brightness increase in coronagraphic images, associated with the interaction of the leading edges. The importance of having multiple satellites at...
A 3D MHD simulation of SN 1006: a polarized emission study for the turbulent case
Velázquez, P. F.; Schneiter, E. M.; Reynoso, E. M.; Esquivel, A.; De Colle, F.; Toledo-Roy, J. C.; Gómez, D. O.; Sieyra, M. V.; Moranchel-Basurto, A.
2017-01-01
Three dimensional magnetohydrodynamical simulations were carried out in order to perform a new polarization study of the radio emission of the supernova remnant SN 1006. These simulations consider that the remnant expands into a turbulent interstellar medium (including both magnetic field and figuredensity perturbations). Based on the referenced-polar angle technique, a statistical study was done on observational and numerical magnetic field position-angle distributions. Our results show that a turbulent medium with an adiabatic index of 1.3 can reproduce the polarization properties of the SN 1006 remnant. This statistical study reveals itself as a useful tool for obtaining the orientation of the ambient magnetic field, previous to be swept up by the main supernova remnant shock.
Rajendar, A.; Paty, C. S.; Arridge, C. S.; Jackman, C. M.; Smith, H. T.
2013-12-01
Saturn's magnetosphere is driven externally, by the solar wind, and internally, by the planet's strong magnetic field, rapid rotation rate, and the addition of new plasma created from Saturn's neutral cloud. Externally, the alignment of the rotational and magnetic dipole axes, combined with Saturn's substantial inclination to its plane of orbit result in substantial curvature of the plasma sheet during solstice. Internally, new water group ions are produced in the inner regions of the magnetosphere from photoionization and electron-impact ionization of the water vapor and OH cloud sourced from Enceladus and other icy bodies in Saturn's planetary system. In addition to this, charge-exchange collisions between the relatively fast-moving water group ions and the slower neutrals results in a net loss of momentum from the plasma. In order to study these phenomena, we have made significant modifications to the Saturn multifluid model. This model has been previously used to investigate the external triggering of plasmoids and the interchange process using a fixed internal source rate. In order to improve the fidelity of the model, we have incorporated a physical source of mass- and momentum-loading by including an empirical representation of Saturn's neutral cloud and modifying the multifluid MHD equations to include mass- and momentum-loading terms. Collision cross-sections between ions, electrons, and neutrals are calculated as functions of closure velocity and energy at each grid point and time step, enabling us to simulate the spatially and temporally varying plasma-neutral interactions. In addition to this, by altering the angle of incidence of the solar wind relative to Saturn's rotational axis and applying a realistic latitudinally- and seasonally-varying ionospheric conductivity, we are also able to study seasonal effects on Saturn's magnetosphere. We use the updated multifluid simulation to investigate the dynamics of Saturn's magnetosphere, focusing specifically
3D MHD Simulations of accreting neutron stars: evidence of QPO emission from the surface
Bachetti, Matteo; Kulkarni, Akshay; Burderi, Luciano; di Salvo, Tiziana; .,
2009-01-01
3D Magnetohydrodynamic simulations show that when matter accretes onto neutron stars, in particular if the misalignment angle is small, it does not constantly fall at a fixed spot. Instead, the location at which matter reaches the star moves. These moving hot spots can be produced both during stable accretion, where matter falls near the magnetic poles of the star, and unstable accretion, characterized by the presence of several tongues of matter which fall on the star near the equator, due to Rayleigh-Taylor instabilities. Precise modeling with Monte Carlo simulations shows that those movements could be observed as high frequency Quasi Periodic Oscillations. We performed a number of new simulation runs with a much wider set of parameters, focusing on neutron stars with a small misalignment angle. In most cases we observe oscillations whose frequency is correlated with the mass accretion rate $\\dot{M}$. Moreover, in some cases double QPOs appear, each of them showing the same correlation with $\\dot{M}$.
Evolution of cosmic filaments and of their galaxy population from MHD cosmological simulations
Gheller, C.; Vazza, F.; Brüggen, M.; Alpaslan, M.; Holwerda, B. W.; Hopkins, A. M.; Liske, J.
2016-10-01
Despite containing about a half of the total matter in the Universe, at most wavelengths the filamentary structure of the cosmic web is difficult to observe. In this work, we use large unigrid cosmological simulations to investigate how the geometrical, thermodynamical and magnetic properties of cosmological filaments vary with mass and redshift (z ≤ 1). We find that the average temperature, length, volume and magnetic field of filaments scales well with their total mass. This reflects the role of self-gravity in shaping their properties and enables statistical predictions of their observational properties based on their mass. We also focus on the properties of the simulated population of galaxy-sized haloes within filaments, and compare their properties to the results obtained from the spectroscopic GAMA survey. Simulated and observed filaments with the same length are found to contain an equal number of galaxies, with very similar distribution of masses. The total number of galaxies within each filament and the total/average stellar mass in galaxies can now be used to predict also the large-scale properties of the gas in the host filaments across tens or hundreds of Mpc in scale. These results are the first steps towards the future use of galaxy catalogues in order to select the best targets for observations of the warm-hot intergalactic medium.
Cheung, M. C. M.; Schüssler, M.; Moreno-Insertis, F.
2007-05-01
Aims:We study the emergence of magnetic flux from the near-surface layers of the solar convection zone into the photosphere. Methods: To model magnetic flux emergence, we carried out a set of numerical radiative magnetohydrodynamics simulations. Our simulations take into account the effects of compressibility, energy exchange via radiative transfer, and partial ionization in the equation of state. All these physical ingredients are essential for a proper treatment of the problem. Furthermore, the inclusion of radiative transfer allows us to directly compare the simulation results with actual observations of emerging flux. Results: We find that the interaction between the magnetic flux tube and the external flow field has an important influence on the emergent morphology of the magnetic field. Depending on the initial properties of the flux tube (e.g. field strength, twist, entropy etc.), the emergence process can also modify the local granulation pattern. The emergence of magnetic flux tubes with a flux of 1019 Mx disturbs the granulation and leads to the transient appearance of a dark lane, which is coincident with upflowing material. These results are consistent with observed properties of emerging magnetic flux. Movies are only available in electronic form at http://www.aanda.org
Simulations of the C-2/C-2U Field Reversed Configurations with the Q2D code
Onofri, Marco; Dettrick, Sean; Barnes, Daniel; Tajima, Toshiki; TAE Team
2015-11-01
C-2U was built to sustain advanced beam-driven FRCs for 5 + ms. The Q2D transport code is used to simulate the evolution of C-2U discharges and to study sustainment via fast ion current and pressure, with the latter comparable to the thermal plasma pressure. The code solves the MHD equations together with source terms due to neutral beams, which are calculated by a Monte Carlo method. We compare simulations with experimental results obtained in the HPF14 regime of C-2 (6 neutral beams with energy of 20 keV and total power of 4.2 MW). All simulations start from an initial equilibrium and transport coefficients are chosen to match experimental data. The best agreement is obtained when utilizing an enhanced energy transfer between fast ions and the plasma, which may be an indication of anomalous heating due to beneficial beam-plasma instabilities. Similar simulations of C-2U (neutral beam power increased to 10 + MW and angled beam injection) are compared with experimental results, where a steady state has been obtained for 5 + ms, correlated with the neutral beam pulse and limited by engineering constraints.
Characteristics of laminar MHD fluid hammer in pipe
Huang, Z.Y.; Liu, Y.J., E-mail: yajun@scut.edu.cn
2016-01-01
As gradually wide applications of MHD fluid, transportation as well as control with pumps and valves is unavoidable, which induces MHD fluid hammer. The paper attempts to combine MHD effect and fluid hammer effect and to investigate the characteristics of laminar MHD fluid hammer. A non-dimensional fluid hammer model, based on Navier–Stocks equations, coupling with Lorentz force is numerically solved in a reservoir–pipe–valve system with uniform external magnetic field. The MHD effect is represented by the interaction number which associates with the conductivity of the MHD fluid as well as the external magnetic field and can be interpreted as the ratio of Lorentz force to Joukowsky force. The transient numerical results of pressure head, average velocity, wall shear stress, velocity profiles and shear stress profiles are provided. The additional MHD effect hinders fluid motion, weakens wave front and homogenizes velocity profiles, contributing to obvious attenuation of oscillation, strengthened line packing and weakened Richardson annular effect. Studying the characteristics of MHD laminar fluid hammer theoretically supplements the gap of knowledge of rapid-transient MHD flow and technically provides beneficial information for MHD pipeline system designers to better devise MHD systems. - Highlights: • Characteristics of laminar MHD fluid hammer are discussed by simulation. • MHD effect has significant influence on attenuation of wave. • MHD effect strengthens line packing. • MHD effect inhibits Richardson annular effect.
Efficient magnetohydrodynamic simulations on graphics processing units with CUDA
Wong, Hon-Cheng; Wong, Un-Hong; Feng, Xueshang; Tang, Zesheng
2011-10-01
Magnetohydrodynamic (MHD) simulations based on the ideal MHD equations have become a powerful tool for modeling phenomena in a wide range of applications including laboratory, astrophysical, and space plasmas. In general, high-resolution methods for solving the ideal MHD equations are computationally expensive and Beowulf clusters or even supercomputers are often used to run the codes that implemented these methods. With the advent of the Compute Unified Device Architecture (CUDA), modern graphics processing units (GPUs) provide an alternative approach to parallel computing for scientific simulations. In this paper we present, to the best of the author's knowledge, the first implementation of MHD simulations entirely on GPUs with CUDA, named GPU-MHD, to accelerate the simulation process. GPU-MHD supports both single and double precision computations. A series of numerical tests have been performed to validate the correctness of our code. Accuracy evaluation by comparing single and double precision computation results is also given. Performance measurements of both single and double precision are conducted on both the NVIDIA GeForce GTX 295 (GT200 architecture) and GTX 480 (Fermi architecture) graphics cards. These measurements show that our GPU-based implementation achieves between one and two orders of magnitude of improvement depending on the graphics card used, the problem size, and the precision when comparing to the original serial CPU MHD implementation. In addition, we extend GPU-MHD to support the visualization of the simulation results and thus the whole MHD simulation and visualization process can be performed entirely on GPUs.
Scientific codes developed and used at GRS. Nuclear simulation chain
Schaffrath, Andreas; Sonnenkalb, Martin; Sievers, Juergen; Luther, Wolfgang; Velkov, Kiril [Gesellschaft fuer Anlagen und Reaktorsicherheit (GRS) gGmbH, Garching/Muenchen (Germany). Forschungszentrum
2016-05-15
Over 60 technical experts of the reactor safety research division of the Gesellschaft fuer Anlagen- und Reaktorsicherheit (GRS) gGmbH are developing and validating reliable methods and computer codes - summarized under the term nuclear simulation chain - for the safety-related assessment for all types of nuclear power plants (NPP) and other nuclear facilities considering the current state of science and technology. This nuclear simulation chain has to be able to simulate and assess all relevant physical processes and phenomena for all operating states and (severe) accidents. In the present contribution, the nuclear simulation chain developed and applied by GRS as well as selected examples of its application are presented. The latter demonstrate impressively the width of its scope and its performance. The GRS codes can be passed on request to other (national as well as international) organizations. This contributes to a worldwide increase of the nuclear safety standards. The code transfer is especially important for developing and emerging countries lacking the financial means and/or the necessary know-how for this purpose. At the end of this contribution, the respective course of action is described.
Simulations of flashing experiments in TOPFLOW facility with TRACE code
Mikuž, Blaž, E-mail: blaz.mikuz@ijs.si [Jozef Stefan Institute, Reactor Engineering Division, Jamova cesta 39, 1000 Ljubljana (Slovenia); Tiselj, Iztok [Jozef Stefan Institute, Reactor Engineering Division, Jamova cesta 39, 1000 Ljubljana (Slovenia); Beyer, Matthias; Lucas, Dirk [Institute of Fluid Dynamics, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328 Dresden (Germany)
2015-03-15
Highlights: • Two decompression experiments performed at TOPFLOW are simulated with a TRACE code. • The depressurization triggers flashing of the slightly undersaturated liquid water. • Pressure, temperature and void fractions are compared with measurements. • Prediction of the choked flow is the most critical parameter of simulations. • Good agreement with measurements at high initial pressure (i.e. 65 and 40 bars). - Abstract: The decompression experiments performed at TOPFLOW facility in 2010 have been reproduced using the latest best-estimate thermohydraulic system code TRACE (V 5.0 Patch 3). The main component of TOPFLOW facility was about 8 m long vertical tube with an inner diameter of 195.3 mm. The evaporation of liquid water to steam caused by depressurization was simulated using two different procedures: from stagnant water and during circulating of water in tubes. The liquid water was almost saturated at initial pressure values of 1.0, 2.0, 4.0 and 6.5 MPa. Our approach applies one-dimensional code to simulate all the important parts of the facility not just the vertical test section, where the measurements were taken. The obtained simulated pressure, temperature and void fractions are compared with measured values. The simulations of the first procedure (stagnant water at beginning) are in a good agreement with measurements, especially for the cases with longer transients and higher initial pressure, however, choked flow model through the blow-off valve had to be adjusted. There is a short transient (about 2 s) after the fast opening valve opens, which was not reproduced correctly with TRACE. The simulations of the second procedure (circulating water in a loop) correctly predict pressure and temperature decrease, but underpredict void fraction. No modification of the default TRACE choked flow model was needed for procedure B.
Simulation of EAST quasi-snowflake discharge by tokamak simulation code
Guo, Y., E-mail: yguo@ipp.ac.cn [Institute of Plasma Physics, Chinese Academy of Science, Hefei 230031 (China); Pironti, A. [CREATE, Università di Napoli Federico II, Università di Cassino and Università di Napoli Parthenope, Via Claudio 19, Napoli 80125 (Italy); Liu, L. [Institute of Plasma Physics, Chinese Academy of Science, Hefei 230031 (China); Xiao, B.J. [Institute of Plasma Physics, Chinese Academy of Science, Hefei 230031 (China); School of Nuclear Science and Technology, University of Science and Technology of China, Hefei 230026 (China); Albanese, R.; Ambrosino, R. [CREATE, Università di Napoli Federico II, Università di Cassino and Università di Napoli Parthenope, Via Claudio 19, Napoli 80125 (Italy); Luo, Z.P.; Yuan, Q.P. [Institute of Plasma Physics, Chinese Academy of Science, Hefei 230031 (China); Calabrò, G.; Crisanti, F. [ENEA UnitàTecnicaFusione, C.R. Frascati, Via E. Fermi 45, Frascati 00044, Roma (Italy); Xing, Z. [Institute of Plasma Physics, Chinese Academy of Science, Hefei 230031 (China)
2015-12-15
Highlights: • By tokamak simulation code (TSC), we reproduce the quasi-snowflake (QSF) discharge controlled by RZIp method. • Singular Value Decomposition (SVD) method, a way to decouple the PF current and control parameter, is implemented in TSC code. • TSC code is used to simulate the QSF shape control by SVD method. • The calculation results show SVD method is a good way for EAST QSF shape control. - Abstract: Both theory and experiment have proved Snowflake configuration could reduce the heat loads on divertor plate. Due to limitation of PF coils, EAST could only operate with quasi-snowflake (QSF). In 2014 EAST campaign, QSF has been achieved by RZIp control. The next important task is the QSF shape control. As tokamak discharge simulation code, Tokamak Simulation Code (TSC), which has been benchmarked by experimental data, is used to simulate EAST QSF discharge. Singular Value Decomposition (SVD) method, a way to decouple the PF current and control parameter, is implemented in TSC code to simulate the course of QSF shape control. The simulation results show SVD method is a good way for EAST QSF shape control.
Global MHD simulation and analysis of Feb. 22, 2009 THEMIS substorm event
Zhu, P.; Raeder, J.; Sakaguchi, K.; Shiokawa, K.; Hegna, C.
2009-12-01
Rayleigh-Taylor (RT)-like finger patterns have been observed in the diffuse aurora image at the beginning of recovery phase during recent Feb. 22, 2009 THEMIS substorm event [Sagaguchi and Shiokawa, 2009]. In this work, efforts are undertaken to identify the plasma processes in the magnetotail region that may be associated with or contribute to the formation of the RT-like aurora structure. Using the solar wind data from ACE satellite observation for the substorm event as an input at day-side, OpenGGCM simulations are used to reconstruct a sequence of global magnetospheric configurations around the Feb. 22, 2009 substorm onset. We benchmark the simulation with the THEMIS satellite data and compare the electron precipitation flux pattern in ionosphere region with the aurora images from all-sky ground observations. The ballooning stability criterion and growth rates of the near-Earth plasma sheet region are evaluated prior to the substorm onset time. The question we are addressing is if the RT-like aurora image pattern could be a footprint or projection of the ballooning-interchange processes in the plasma sheet. Research supported by NSF Grant No. ATM-0902360.
Development of dynamic simulation code for fuel cycle fusion reactor
Aoki, Isao; Seki, Yasushi [Department of Fusion Engineering Research, Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki (Japan); Sasaki, Makoto; Shintani, Kiyonori; Kim, Yeong-Chan
1999-02-01
A dynamic simulation code for fuel cycle of a fusion experimental reactor has been developed. The code follows the fuel inventory change with time in the plasma chamber and the fuel cycle system during 2 days pulse operation cycles. The time dependence of the fuel inventory distribution is evaluated considering the fuel burn and exhaust in the plasma chamber, purification and supply functions. For each subsystem of the plasma chamber and the fuel cycle system, the fuel inventory equation is written based on the equation of state considering the fuel burn and the function of exhaust, purification, and supply. The processing constants of subsystem for steady states were taken from the values in the ITER Conceptual Design Activity (CDA) report. Using this code, the time dependence of the fuel supply and inventory depending on the burn state and subsystem processing functions are shown. (author)
Simulations of Laboratory Astrophysics Experiments using the CRASH code
Trantham, Matthew; Kuranz, Carolyn; Fein, Jeff; Wan, Willow; Young, Rachel; Keiter, Paul; Drake, R. Paul
2015-11-01
Computer simulations can assist in the design and analysis of laboratory astrophysics experiments. The Center for Radiative Shock Hydrodynamics (CRASH) at the University of Michigan developed a code that has been used to design and analyze high-energy-density experiments on OMEGA, NIF, and other large laser facilities. This Eulerian code uses block-adaptive mesh refinement (AMR) with implicit multigroup radiation transport, electron heat conduction and laser ray tracing. This poster will demonstrate some of the experiments the CRASH code has helped design or analyze including: Kelvin-Helmholtz, Rayleigh-Taylor, magnetized flows, jets, and laser-produced plasmas. This work is funded by the following grants: DEFC52-08NA28616, DE-NA0001840, and DE-NA0002032.
Initial Studies of Validation of MHD Models for MST Reversed Field Pinch Plasmas
Jacobson, C. M.; Almagri, A. F.; Craig, D.; McCollam, K. J.; Reusch, J. A.; Sauppe, J. P.; Sovinec, C. R.; Triana, J. C.
2015-11-01
Quantitative validation of visco-resistive MHD models for RFP plasmas takes advantage of MST's advanced diagnostics. These plasmas are largely governed by MHD relaxation activity, so that a broad range of validation metrics can be evaluated. Previous nonlinear simulations using the visco-resistive MHD code DEBS at Lundquist number S = 4 ×106 produced equilibrium relaxation cycles in qualitative agreement with experiment, but magnetic fluctuation amplitudes b~ were at least twice as large as in experiment. The extended-MHD code NIMROD previously suggested that a two-fluid model may be necessary to produce b~ in agreement with experiment. For best comparisons with DEBS and to keep computational expense tractable, NIMROD is run in single-fluid mode at low S. These simulations are complemented by DEBS at higher S in cylindrical geometry, which will be used to examine b~ as a function of S. Experimental measurements are used with results from these simulations to evaluate validation metrics. Convergence tests of previous high S DEBS simulations are also discussed, along with benchmarking of DEBS and NIMROD with the SPECYL and PIXIE3D codes. Work supported by U.S. DOE and NSF.
Simard, C; Dube, C
2016-01-01
We perform a mean-field analysis of the EULAG-MHD millenium simulation of global magnetohydrodynamical convection presented in Passos et al. 2014. The turbulent electromotive force operating in the simulation is assumed to be linearly related to the cyclic axisymmetric mean magnetic field and its first spatial derivatives. At every grid point in the simulation's meridional plane, this assumed relationship involves 27 independent tensorial coefficients. Expanding on Racine et al. 2011, we extract these coefficients from the simulation data through a least-squares minimization procedure based on singular value decomposition. The reconstructed alpha-tensor shows good agreement with that obtained by Racine et al. 2011, who did not include derivatives of the mean-field in their fit, as well as with the alpha-tensor extracted by Augustson et al. 2015 from a distinct ASH MHD simulation. The isotropic part of the turbulent magnetic diffusivity tensor beta is positive definite and reaches values of 5.0x10^7 m2s-1 in t...
3D Relativistic MHD Simulation of a Tilted Accretion Disk Around a Rapidly Rotating Black Hole
Fragile, P Chris; Blaes, Omer M; Salmonson, Jay D
2016-01-01
We posit that accreting compact objects, including stellar mass black holes and neutron stars as well as supermassive black holes, may undergo extended periods of accretion during which the angular momentum of the disk at large scales is misaligned with that of the compact object. In such a scenario, Lense-Thirring precession caused by the rotating compact object can dramatically affect the disk. In this presentation we describe results from a three-dimensional relativistic magnetohydrodynamic simulation of an MRI turbulent disk accreting onto a tilted rapidly rotating black hole. For this case, the disk does not achieve the commonly described Bardeen-Petterson configuration; rather, it remains nearly planar, undergoing a slow global precession. Accretion from the disk onto the hole occurs predominantly through two opposing plunging streams that start from high latitudes with respect to both the black-hole and disk midplanes. This is a consequence of the non-sphericity of the gravitational spacetime of the bl...
Cosmological MHD Simulations of Galaxy Cluster Radio Relics: Insights and Warnings for Observations
Skillman, Samuel W; Hallman, Eric J; O'Shea, Brian W; Burns, Jack O; Li, Hui; Collins, David C; Norman, Michael L
2012-01-01
Non-thermal radio emission from cosmic ray electrons in the vicinity of merging galaxy clusters is an important tracer of cluster merger activity, and is the result of complex physical processes that involve magnetic fields, particle acceleration, gas dynamics, and radiation. In particular, objects known as radio relics are thought to be the result of shock-accelerated electrons that, when embedded in a magnetic field, emit synchrotron radiation in the radio wavelengths. In order to properly model this emission, we utilize the adaptive mesh refinement simulation of the magnetohydrodynamic evolution of a galaxy cluster from cosmological initial conditions. We locate shock fronts and apply models of cosmic ray electron acceleration that are then input into radio emission models. We have determined the thermodynamic properties of this radio-emitting plasma and constructed synthetic radio observations to compare to observed galaxy clusters. We find a significant dependence of the observed morphology and radio rel...
Relativistic MHD simulations of core-collapse GRB jets: 3D instabilities and magnetic dissipation
Bromberg, Omer
2015-01-01
Relativistic jets naturally occur in astrophysical systems that involve accretion onto compact objects, such as core collapse of massive stars in gamma-ray bursts (GRBs) and accretion onto supermassive black holes in active galactic nuclei (AGN). It is generally accepted that these jets are powered electromagnetically, by the magnetised rotation of a central compact object. However, how they produce the observed emission and survive the propagation for many orders of magnitude in distance without being disrupted by current-driven non-axisymmetric instabilities is the subject of active debate. We carry out time-dependent 3D relativistic magnetohydrodynamic simulations of relativistic, Poynting flux dominated jets. The jets are launched self-consistently by the rotation of a strongly magnetised central compact object. This determines the natural degree of azimuthal magnetic field winding, a crucial factor that controls jet stability. We find that the jets are susceptible to two types of instability: (i) a globa...
Fairfield, Donald H.; Otto, A.
1999-01-01
On March 24, 1995 the Geotail spacecraft observed large fluctuations of the magnetic field and plasma properties in the Low Latitude Boundary Layer (LLBL) about 15 R(sub E) tailward of the dusk meridian. Although the magnetospheric and the magnetosheath field were strongly northward, the B(sub z) component showed strong short duration fluctuations in which B(sub z) could even reach negative values. We have used two-dimensional magnetohydrodynamic simulations with magnetospheric and magnetosheath input parameters specifically chosen for this. Geotail event to identify the processes which cause the observed boundary properties. It is shown that these fluctuations can be explained by the Kelvin-Helmholtz instability if the k vector of the instability has a component along the magnetic field direction. The simulation results show many of the characteristic properties of the Geotail observations. In particular, the quasi-periodic strong fluctuations are well explained by satellite crossings through the Kelvin-Helmholtz vortices. It is illustrated how the interior structure of the Kelvin-Helmholtz vortices leads to the rapid fluctuations in the Geotail observations. Our results suggest an average Kelvin-Helmholtz wavelength of about 5 R(sub E) with a vortex size of close to 2 R(sub E) for an average repetition time of 2.5 minutes. The growth time for these waves implies a source region of about 10 to 16 R(sub E) upstream from the location of the Geotail spacecraft (i.e., near the dusk meridian). The results also indicate a considerable mass transport of magnetosheath material into the magnetosphere by magnetic reconnection in the Kelvin-Helmholtz vortices.
Parallelization of a Monte Carlo particle transport simulation code
Hadjidoukas, P.; Bousis, C.; Emfietzoglou, D.
2010-05-01
We have developed a high performance version of the Monte Carlo particle transport simulation code MC4. The original application code, developed in Visual Basic for Applications (VBA) for Microsoft Excel, was first rewritten in the C programming language for improving code portability. Several pseudo-random number generators have been also integrated and studied. The new MC4 version was then parallelized for shared and distributed-memory multiprocessor systems using the Message Passing Interface. Two parallel pseudo-random number generator libraries (SPRNG and DCMT) have been seamlessly integrated. The performance speedup of parallel MC4 has been studied on a variety of parallel computing architectures including an Intel Xeon server with 4 dual-core processors, a Sun cluster consisting of 16 nodes of 2 dual-core AMD Opteron processors and a 200 dual-processor HP cluster. For large problem size, which is limited only by the physical memory of the multiprocessor server, the speedup results are almost linear on all systems. We have validated the parallel implementation against the serial VBA and C implementations using the same random number generator. Our experimental results on the transport and energy loss of electrons in a water medium show that the serial and parallel codes are equivalent in accuracy. The present improvements allow for studying of higher particle energies with the use of more accurate physical models, and improve statistics as more particles tracks can be simulated in low response time.
RAMSES-CH: a new chemodynamical code for cosmological simulations
Few, C. G.; Courty, S.; Gibson, B. K.; Kawata, D.; Calura, F.; Teyssier, R.
2012-07-01
We present a new chemodynamical code -RAMSES-CH- for use in simulating the self-consistent evolution of chemical and hydrodynamical properties of galaxies within a fully cosmological framework. We build upon the adaptive mesh refinement code RAMSES, which includes a treatment of self-gravity, hydrodynamics, star formation, radiative cooling and supernova feedback, to trace the dominant isotopes of C, N, O, Ne, Mg, Si and Fe. We include the contribution of Type Ia and Type II supernovae, in addition to low- and intermediate-mass asymptotic giant branch stars, relaxing the instantaneous recycling approximation. The new chemical evolution modules are highly flexible and portable, lending themselves to ready exploration of variations in the underpinning stellar and nuclear physics. We apply RAMSES-CH to the cosmological simulation of a typical L★ galaxy, demonstrating the successful recovery of the basic empirical constraints regarding [α/Fe]-[Fe/H] and Type Ia/II supernova rates.
RAMSES-CH: A New Chemodynamical Code for Cosmological Simulations
Few, C Gareth; Gibson, Brad K; Kawata, Daisuke; Calura, Francesco; Teyssier, Romain
2012-01-01
We present a new chemodynamical code - Ramses-CH - for use in simulating the self-consistent evolution of chemical and hydrodynamical properties of galaxies within a fully cosmological framework. We build upon the adaptive mesh refinement code Ramses, which includes a treatment of self-gravity, hydrodynamics, star formation, radiative cooling, and supernovae feedback, to trace the dominant isotopes of C, N, O, Ne, Mg, Si, and Fe. We include the contribution of Type Ia and II supernovae, in addition to low- and intermediate-mass asymptotic giant branch stars, relaxing the instantaneous recycling approximation. The new chemical evolution modules are highly flexible and portable, lending themselves to ready exploration of variations in the underpining stellar and nuclear physics. We apply Ramses-CH to the cosmological simulation of a typical L\\star galaxy, demonstrating the successful recovery of the basic empirical constraints regarding, [{\\alpha}/Fe]-[Fe/H] and Type Ia/II supernovae rates.
Abla, G
2012-11-09
The Center for Simulation of Wave Interactions with Magnetohydrodynamics (SWIM) project is dedicated to conduct research on integrated multi-physics simulations. The Integrated Plasma Simulator (IPS) is a framework that was created by the SWIM team. It provides an integration infrastructure for loosely coupled component-based simulations by facilitating services for code execution coordination, computational resource management, data management, and inter-component communication. The IPS framework features improving resource utilization, implementing application-level fault tolerance, and support of the concurrent multi-tasking execution model. The General Atomics (GA) team worked closely with other team members on this contract, and conducted research in the areas of computational code monitoring, meta-data management, interactive visualization, and user interfaces. The original website to monitor SWIM activity was developed in the beginning of the project. Due to the amended requirements, the software was redesigned and a revision of the website was deployed into production in April of 2010. Throughout the duration of this project, the SWIM Monitoring Portal (http://swim.gat.com:8080/) has been a critical production tool for supporting the project's physics goals.
Low-temperature plasma simulations with the LSP PIC code
Carlsson, Johan; Khrabrov, Alex; Kaganovich, Igor; Keating, David; Selezneva, Svetlana; Sommerer, Timothy
2014-10-01
The LSP (Large-Scale Plasma) PIC-MCC code has been used to simulate several low-temperature plasma configurations, including a gas switch for high-power AC/DC conversion, a glow discharge and a Hall thruster. Simulation results will be presented with an emphasis on code comparison and validation against experiment. High-voltage, direct-current (HVDC) power transmission is becoming more common as it can reduce construction costs and power losses. Solid-state power-electronics devices are presently used, but it has been proposed that gas switches could become a compact, less costly, alternative. A gas-switch conversion device would be based on a glow discharge, with a magnetically insulated cold cathode. Its operation is similar to that of a sputtering magnetron, but with much higher pressure (0.1 to 0.3 Torr) in order to achieve high current density. We have performed 1D (axial) and 2D (axial/radial) simulations of such a gas switch using LSP. The 1D results were compared with results from the EDIPIC code. To test and compare the collision models used by the LSP and EDIPIC codes in more detail, a validation exercise was performed for the cathode fall of a glow discharge. We will also present some 2D (radial/azimuthal) LSP simulations of a Hall thruster. The information, data, or work presented herein was funded in part by the Advanced Research Projects Agency-Energy (ARPA-E), U.S. Department of Energy, under Award Number DE-AR0000298.
Enhanced verification test suite for physics simulation codes
Kamm, James R.; Brock, Jerry S.; Brandon, Scott T.; Cotrell, David L.; Johnson, Bryan; Knupp, Patrick; Rider, William J.; Trucano, Timothy G.; Weirs, V. Gregory
2008-09-01
This document discusses problems with which to augment, in quantity and in quality, the existing tri-laboratory suite of verification problems used by Los Alamos National Laboratory (LANL), Lawrence Livermore National Laboratory (LLNL), and Sandia National Laboratories (SNL). The purpose of verification analysis is demonstrate whether the numerical results of the discretization algorithms in physics and engineering simulation codes provide correct solutions of the corresponding continuum equations.
Electron cloud effects: codes and simulations at KEK
Ohmi, K
2013-01-01
Electron cloud effects had been studied at KEK-Photon Factory since 1995. e-p instability had been studied in proton rings since 1965 in BINP, ISR and PSR. Study of electron cloud effects with the present style, which was based on numerical simulations, started at 1995 in positron storage rings. The instability observed in KEKPF gave a strong impact to B factories, KEKB and PEPII, which were final stage of their design in those days. History of cure for electron cloud instability overlapped the progress of luminosity performance in KEKB. The studies on electron cloud codes and simulations in KEK are presented.
CHOLLA: A New Massively Parallel Hydrodynamics Code for Astrophysical Simulation
Schneider, Evan E.; Robertson, Brant E.
2015-04-01
We present Computational Hydrodynamics On ParaLLel Architectures (Cholla ), a new three-dimensional hydrodynamics code that harnesses the power of graphics processing units (GPUs) to accelerate astrophysical simulations. Cholla models the Euler equations on a static mesh using state-of-the-art techniques, including the unsplit Corner Transport Upwind algorithm, a variety of exact and approximate Riemann solvers, and multiple spatial reconstruction techniques including the piecewise parabolic method (PPM). Using GPUs, Cholla evolves the fluid properties of thousands of cells simultaneously and can update over 10 million cells per GPU-second while using an exact Riemann solver and PPM reconstruction. Owing to the massively parallel architecture of GPUs and the design of the Cholla code, astrophysical simulations with physically interesting grid resolutions (≳2563) can easily be computed on a single device. We use the Message Passing Interface library to extend calculations onto multiple devices and demonstrate nearly ideal scaling beyond 64 GPUs. A suite of test problems highlights the physical accuracy of our modeling and provides a useful comparison to other codes. We then use Cholla to simulate the interaction of a shock wave with a gas cloud in the interstellar medium, showing that the evolution of the cloud is highly dependent on its density structure. We reconcile the computed mixing time of a turbulent cloud with a realistic density distribution destroyed by a strong shock with the existing analytic theory for spherical cloud destruction by describing the system in terms of its median gas density.
Ali, M. M.; Alim, M. A.; Maleque, M. A.; Ahmed, Syed Sabbir
2017-06-01
A numerical study has been carried out to analyze the flow and heat transfer characteristics due to the effects of magnetohydrodynamic free convection flow in a differentially heated enclosure having a hot tilted square block. The vertical and horizontal walls of the cavity are non-uniformly heated while the walls of the tilted block are uniformly heated. The basic partial differential equations of the physical problem are solved numerically using finite element technique along with Galerkin's weighted residual simulation. Calculations have been performed for different values of buoyancy parameter (102 ≤ Ra ≤ 105) and magnetic field parameter (0 ≤ Ha ≤ 60) and obtained results are illustrated in terms of streamlines, isotherms, average Nusselt number and average temperature. The results show that the flow pattern and temperature distributions affected noticeably for the effect of aforementioned parameters. In addition, an increase in average Nusselt number is found for the whole range of Rayleigh number and average temperature decreased for increasing Rayleigh number. Comparison between the obtained results and the previously published results on the basis of special case is a good agreement.
Synchrotron radiation of self-collimating relativistic MHD jets
Porth, Oliver; Meliani, Zakaria; Vaidya, Bhargav
2011-01-01
The goal of this paper is to derive signatures of synchrotron radiation from state-of-the-art simulation models of collimating relativistic magnetohydrodynamic (MHD) jets featuring a large-scale helical magnetic field. We perform axisymmetric special relativistic MHD simulations of the jet acceleration region using the PLUTO code. The computational domain extends from the slow magnetosonic launching surface of the disk up to 6000^2 Schwarzschild radii allowing to reach highly relativistic Lorentz factors. The Poynting dominated disk wind develops into a jet with Lorentz factors of 8 and is collimated to 1 degree. In addition to the disk jet, we evolve a thermally driven spine jet, emanating from a hypothetical black hole corona. Solving the linearly polarized synchrotron radiation transport within the jet, we derive VLBI radio and (sub-) mm diagnostics such as core shift, polarization structure, intensity maps, spectra and Faraday rotation measure (RM), directly from the Stokes parameters. We also investigate...
Generating performance portable geoscientific simulation code with Firedrake (Invited)
Ham, D. A.; Bercea, G.; Cotter, C. J.; Kelly, P. H.; Loriant, N.; Luporini, F.; McRae, A. T.; Mitchell, L.; Rathgeber, F.
2013-12-01
This presentation will demonstrate how a change in simulation programming paradigm can be exploited to deliver sophisticated simulation capability which is far easier to programme than are conventional models, is capable of exploiting different emerging parallel hardware, and is tailored to the specific needs of geoscientific simulation. Geoscientific simulation represents a grand challenge computational task: many of the largest computers in the world are tasked with this field, and the requirements of resolution and complexity of scientists in this field are far from being sated. However, single thread performance has stalled, even sometimes decreased, over the last decade, and has been replaced by ever more parallel systems: both as conventional multicore CPUs and in the emerging world of accelerators. At the same time, the needs of scientists to couple ever-more complex dynamics and parametrisations into their models makes the model development task vastly more complex. The conventional approach of writing code in low level languages such as Fortran or C/C++ and then hand-coding parallelism for different platforms by adding library calls and directives forces the intermingling of the numerical code with its implementation. This results in an almost impossible set of skill requirements for developers, who must simultaneously be domain science experts, numericists, software engineers and parallelisation specialists. Even more critically, it requires code to be essentially rewritten for each emerging hardware platform. Since new platforms are emerging constantly, and since code owners do not usually control the procurement of the supercomputers on which they must run, this represents an unsustainable development load. The Firedrake system, conversely, offers the developer the opportunity to write PDE discretisations in the high-level mathematical language UFL from the FEniCS project (http://fenicsproject.org). Non-PDE model components, such as parametrisations
Testing the Accuracy of Data-driven MHD Simulations of Active Region Evolution
Leake, James E.; Linton, Mark G.; Schuck, Peter W.
2017-04-01
Models for the evolution of the solar coronal magnetic field are vital for understanding solar activity, yet the best measurements of the magnetic field lie at the photosphere, necessitating the development of coronal models which are “data-driven” at the photosphere. We present an investigation to determine the feasibility and accuracy of such methods. Our validation framework uses a simulation of active region (AR) formation, modeling the emergence of magnetic flux from the convection zone to the corona, as a ground-truth data set, to supply both the photospheric information and to perform the validation of the data-driven method. We focus our investigation on how the accuracy of the data-driven model depends on the temporal frequency of the driving data. The Helioseismic and Magnetic Imager on NASA’s Solar Dynamics Observatory produces full-disk vector magnetic field measurements at a 12-minute cadence. Using our framework we show that ARs that emerge over 25 hr can be modeled by the data-driving method with only ∼1% error in the free magnetic energy, assuming the photospheric information is specified every 12 minutes. However, for rapidly evolving features, under-sampling of the dynamics at this cadence leads to a strobe effect, generating large electric currents and incorrect coronal morphology and energies. We derive a sampling condition for the driving cadence based on the evolution of these small-scale features, and show that higher-cadence driving can lead to acceptable errors. Future work will investigate the source of errors associated with deriving plasma variables from the photospheric magnetograms as well as other sources of errors, such as reduced resolution, instrument bias, and noise.
Jia, Xianzhe; Slavin, James; Poh, Gangkai; Toth, Gabor; Gombosi, Tamas
2016-04-01
As the innermost planet, Mercury arguably undergoes the most direct space weathering interactions due to its weak intrinsic magnetic field and its close proximity to the Sun. It has long been suggested that two processes, i.e., erosion of the dayside magnetosphere due to intense magnetopause reconnection and the shielding effect of the induction currents generated at the conducting core, compete against each other in governing the large-scale structure of Mercury's magnetosphere. An outstanding question concerning Mercury's space weather is which of the two processes is more important. To address this question, we have developed a global MHD model in which Mercury's interior is electromagnetically coupled to the surrounding space environment. As demonstrated in Jia et al. (2015), the new modeling capability allows for self-consistently characterizing the dynamical response of the Mercury system to time-varying external conditions. To assess the relative importance of induction and magnetopause reconnection in controlling the magnetospheric configuration, especially under strong solar driving conditions, we have carried out multiple global simulations that adopt a wide range of solar wind dynamic pressure and IMF conditions. We find that, while the magnetopause standoff distance decreases with increasing solar wind pressure, just as expected, its dependence on the solar wind pressure follows closely a power-law relationship with an index of ~ -1/6, rather than a steeper power-law falling-off expected for the case with only induction present. This result suggests that for the range of solar wind conditions examined, the two competing processes, namely induction and reconnection, appear to play equally important roles in determining the global configuration of Mercury's magnetosphere, consistent with the finding obtained by Slavin et al. (2014) based on MESSENGER observations. We also find that the magnetic perturbations produced by the magnetospheric current systems
Wu, C.; Chang, T.
2010-12-01
A new method in describing the multifractal characteristics of intermittent events was introduced by Cheng and Wu [Chang T. and Wu C.C., Physical Rev, E77, 045401(R), 2008]. The procedure provides a natural connection between the rank-ordered spectrum and the idea of one-parameter scaling for monofractals. This technique has been demonstrated using results obtained from a 2D MHD simulation. It has also been successfully applied to in-situ solar wind observations [Chang T., Wu, C.C. and Podesta, J., AIP Conf Proc. 1039, 75, 2008], and the broadband electric field oscillations from the auroral zone [Tam, S.W.Y. et al., Physical Rev, E81, 036414, 2010]. We take the next step in this procedure. By using the ROMA spectra and the scaled probability distribution functions (PDFs), raw PDFs can be calculated, which can be compared directly with PDFs from observations or simulation results. In addition to 2D MHD simulation results and in-situ solar wind observation, we show clearly using the ROMA analysis the multifractal character of the 3D fluid simulation data obtained from the JHU turbulence database cluster at http://turbulence.pha.jhu.edu. In particular, we show the scaling of the non-symmetrical PDF for the parallel-velocity fluctuations of this 3D fluid data.
Relativistic particle transport in extragalactic jets: I. Coupling MHD and kinetic theory
Casse, F
2003-01-01
Multidimensional magneto-hydrodynamical (MHD) simulations coupled with stochastic differential equations (SDEs) adapted to test particle acceleration and transport in complex astrophysical flows are presented. The numerical scheme allows the investigation of shock acceleration, adiabatic and radiative losses as well as diffusive spatial transport in various diffusion regimes. The applicability of SDEs to astrophysics is first discussed in regards to the different regimes and the MHD code spatial resolution. The procedure is then applied to 2.5D MHD-SDE simulations of kilo-parsec scale extragalactic jets. The ability of SDE to reproduce analytical solutions of the diffusion-convection equation for electrons is tested through the incorporation of an increasing number of effects: shock acceleration, spatially dependent diffusion coefficients and synchrotron losses. The SDEs prove to be efficient in various shock configuration occurring in the inner jet during the development of the Kelvin-Helmholtz instability. ...
A computer code to simulate X-ray imaging techniques
Duvauchelle, Philippe E-mail: philippe.duvauchelle@insa-lyon.fr; Freud, Nicolas; Kaftandjian, Valerie; Babot, Daniel
2000-09-01
A computer code was developed to simulate the operation of radiographic, radioscopic or tomographic devices. The simulation is based on ray-tracing techniques and on the X-ray attenuation law. The use of computer-aided drawing (CAD) models enables simulations to be carried out with complex three-dimensional (3D) objects and the geometry of every component of the imaging chain, from the source to the detector, can be defined. Geometric unsharpness, for example, can be easily taken into account, even in complex configurations. Automatic translations or rotations of the object can be performed to simulate radioscopic or tomographic image acquisition. Simulations can be carried out with monochromatic or polychromatic beam spectra. This feature enables, for example, the beam hardening phenomenon to be dealt with or dual energy imaging techniques to be studied. The simulation principle is completely deterministic and consequently the computed images present no photon noise. Nevertheless, the variance of the signal associated with each pixel of the detector can be determined, which enables contrast-to-noise ratio (CNR) maps to be computed, in order to predict quantitatively the detectability of defects in the inspected object. The CNR is a relevant indicator for optimizing the experimental parameters. This paper provides several examples of simulated images that illustrate some of the rich possibilities offered by our software. Depending on the simulation type, the computation time order of magnitude can vary from 0.1 s (simple radiographic projection) up to several hours (3D tomography) on a PC, with a 400 MHz microprocessor. Our simulation tool proves to be useful in developing new specific applications, in choosing the most suitable components when designing a new testing chain, and in saving time by reducing the number of experimental tests.
Gamma ray transport simulations using SGaRD code
Humbert Philippe
2017-01-01
Full Text Available SGaRD (Spectroscopy, Gamma rays, Rapid, Deterministic code is used for the fast calculation of the gamma-ray spectrum, produced by a spherical shielded source and measured by a detector. The photon source lines originate from the radioactive decay of the unstable isotopes. The leakage spectrum is separated in two parts: the uncollided component is transported by ray tracing, and the scattered component is calculated using a multigroup discrete ordinates method. The pulse height spectrum is then simulated by folding the leakage spectrum with the detector response function, which is precalculated for each considered detector type. An application to the simulation of the gamma spectrum produced by a natural uranium ball coated with plexiglass and measured using a NaI detector is presented. The SGaRD code is also used to infer the dimensions of a one-dimensional model of a shielded gamma ray source. The method is based on the simulation of the uncollided leakage current of discrete gamma lines that are produced by nuclear decay. The material thicknesses are computed with SGaRD using a fast ray-tracing algorithm embedded in a nonlinear multidimensional iterative optimization procedure that minimizes the error metric between calculated and measured signatures.
Axisymmetric Plume Simulations with NASA's DSMC Analysis Code
Stewart, B. D.; Lumpkin, F. E., III
2012-01-01
A comparison of axisymmetric Direct Simulation Monte Carlo (DSMC) Analysis Code (DAC) results to analytic and Computational Fluid Dynamics (CFD) solutions in the near continuum regime and to 3D DAC solutions in the rarefied regime for expansion plumes into a vacuum is performed to investigate the validity of the newest DAC axisymmetric implementation. This new implementation, based on the standard DSMC axisymmetric approach where the representative molecules are allowed to move in all three dimensions but are rotated back to the plane of symmetry by the end of the move step, has been fully integrated into the 3D-based DAC code and therefore retains all of DAC s features, such as being able to compute flow over complex geometries and to model chemistry. Axisymmetric DAC results for a spherically symmetric isentropic expansion are in very good agreement with a source flow analytic solution in the continuum regime and show departure from equilibrium downstream of the estimated breakdown location. Axisymmetric density contours also compare favorably against CFD results for the R1E thruster while temperature contours depart from equilibrium very rapidly away from the estimated breakdown surface. Finally, axisymmetric and 3D DAC results are in very good agreement over the entire plume region and, as expected, this new axisymmetric implementation shows a significant reduction in computer resources required to achieve accurate simulations for this problem over the 3D simulations.
Large-Eddy Simulation Code Developed for Propulsion Applications
DeBonis, James R.
2003-01-01
A large-eddy simulation (LES) code was developed at the NASA Glenn Research Center to provide more accurate and detailed computational analyses of propulsion flow fields. The accuracy of current computational fluid dynamics (CFD) methods is limited primarily by their inability to properly account for the turbulent motion present in virtually all propulsion flows. Because the efficiency and performance of a propulsion system are highly dependent on the details of this turbulent motion, it is critical for CFD to accurately model it. The LES code promises to give new CFD simulations an advantage over older methods by directly computing the large turbulent eddies, to correctly predict their effect on a propulsion system. Turbulent motion is a random, unsteady process whose behavior is difficult to predict through computer simulations. Current methods are based on Reynolds-Averaged Navier- Stokes (RANS) analyses that rely on models to represent the effect of turbulence within a flow field. The quality of the results depends on the quality of the model and its applicability to the type of flow field being studied. LES promises to be more accurate because it drastically reduces the amount of modeling necessary. It is the logical step toward improving turbulent flow predictions. In LES, the large-scale dominant turbulent motion is computed directly, leaving only the less significant small turbulent scales to be modeled. As part of the prediction, the LES method generates detailed information on the turbulence itself, providing important information for other applications, such as aeroacoustics. The LES code developed at Glenn for propulsion flow fields is being used to both analyze propulsion system components and test improved LES algorithms (subgrid-scale models, filters, and numerical schemes). The code solves the compressible Favre-filtered Navier- Stokes equations using an explicit fourth-order accurate numerical scheme, it incorporates a compressible form of
Computer code for the atomistic simulation of lattice defects and dynamics. [COMENT code
Schiffgens, J.O.; Graves, N.J.; Oster, C.A.
1980-04-01
This document has been prepared to satisfy the need for a detailed, up-to-date description of a computer code that can be used to simulate phenomena on an atomistic level. COMENT was written in FORTRAN IV and COMPASS (CDC assembly language) to solve the classical equations of motion for a large number of atoms interacting according to a given force law, and to perform the desired ancillary analysis of the resulting data. COMENT is a dual-purpose intended to describe static defect configurations as well as the detailed motion of atoms in a crystal lattice. It can be used to simulate the effect of temperature, impurities, and pre-existing defects on radiation-induced defect production mechanisms, defect migration, and defect stability.
FEMHD: An adaptive finite element method for MHD and edge modelling
Strauss, H.R.
1995-07-01
This paper describes the code FEMHD, an adaptive finite element MHD code, which is applied in a number of different manners to model MHD behavior and edge plasma phenomena on a diverted tokamak. The code uses an unstructured triangular mesh in 2D and wedge shaped mesh elements in 3D. The code has been adapted to look at neutral and charged particle dynamics in the plasma scrape off region, and into a full MHD-particle code.
Simulation of Code Spectrum and Code Flow of Cultured Neuronal Networks.
Tamura, Shinichi; Nishitani, Yoshi; Hosokawa, Chie; Miyoshi, Tomomitsu; Sawai, Hajime
2016-01-01
It has been shown that, in cultured neuronal networks on a multielectrode, pseudorandom-like sequences (codes) are detected, and they flow with some spatial decay constant. Each cultured neuronal network is characterized by a specific spectrum curve. That is, we may consider the spectrum curve as a "signature" of its associated neuronal network that is dependent on the characteristics of neurons and network configuration, including the weight distribution. In the present study, we used an integrate-and-fire model of neurons with intrinsic and instantaneous fluctuations of characteristics for performing a simulation of a code spectrum from multielectrodes on a 2D mesh neural network. We showed that it is possible to estimate the characteristics of neurons such as the distribution of number of neurons around each electrode and their refractory periods. Although this process is a reverse problem and theoretically the solutions are not sufficiently guaranteed, the parameters seem to be consistent with those of neurons. That is, the proposed neural network model may adequately reflect the behavior of a cultured neuronal network. Furthermore, such prospect is discussed that code analysis will provide a base of communication within a neural network that will also create a base of natural intelligence.
GOTHIC code simulation of thermal stratification in POOLEX facility
Li, H.; Kudinov, P. (Royal Institute of Technology (KTH) (Sweden))
2009-07-15
Pressure suppression pool is an important element of BWR containment. It serves as a heat sink and steam condenser to prevent containment pressure buildup during loss of coolant accident or safety relief valve opening during normal operations of a BWR. Insufficient mixing in the pool, in case of low mass flow rate of steam, can cause development of thermal stratification and reduction of pressure suppression pool capacity. For reliable prediction of mixing and stratification phenomena validation of simulation tools has to be performed. Data produced in POOLEX/PPOOLEX facility at Lappeenranta University of Technology about development of thermal stratification in a large scale model of a pressure suppression pool is used for GOTHIC lumped and distributed parameter validation. Sensitivity of GOTHIC solution to different boundary conditions and grid convergence study for 2D simulations of POOLEX STB-20 experiment are performed in the present study. CFD simulation was carried out with FLUENT code in order to get additional insights into physics of stratification phenomena. In order to support development of experimental procedures for new tests in the PPOOLEX facility lumped parameter pre-test GOTHIC simulations were performed. Simulations show that drywell and wetwell pressures can be kept within safety margins during a long transient necessary for development of thermal stratification. (au)
Merlin, Emiliano; Buonomo, Umberto; Grassi, Tommaso; Piovan, Lorenzo; Chiosi, Cesare
2009-01-01
We present EvoL, the new release of the Padova N-body code for cosmological simulations of galaxy formation and evolution. In this paper, the basic Tree + SPH code is presented and analysed, together with an overview on the software architectures. EvoL is a flexible parallel Fortran95 code, specifically designed for simulations of cosmological structure formation on cluster, galactic and sub-galactic scales. EvoL is a fully Lagrangian self-adaptive code, based on the classical Oct-tree and on...
Hayek, W.; Asplund, M.; Carlsson, M.; Trampedach, R.; Collet, R.; Gudiksen, B. V.; Hansteen, V. H.; Leenaarts, J.
2010-07-01
Aims: We present the implementation of a radiative transfer solver with coherent scattering in the new BIFROST code for radiative magneto-hydrodynamical (MHD) simulations of stellar surface convection. The code is fully parallelized using MPI domain decomposition, which allows for large grid sizes and improved resolution of hydrodynamical structures. We apply the code to simulate the surface granulation in a solar-type star, ignoring magnetic fields, and investigate the importance of coherent scattering for the atmospheric structure. Methods: A scattering term is added to the radiative transfer equation, requiring an iterative computation of the radiation field. We use a short-characteristics-based Gauss-Seidel acceleration scheme to compute radiative flux divergences for the energy equation. The effects of coherent scattering are tested by comparing the temperature stratification of three 3D time-dependent hydrodynamical atmosphere models of a solar-type star: without scattering, with continuum scattering only, and with both continuum and line scattering. Results: We show that continuum scattering does not have a significant impact on the photospheric temperature structure for a star like the Sun. Including scattering in line-blanketing, however, leads to a decrease of temperatures by about 350 K below log10 τ5000 ⪉ -4. The effect is opposite to that of 1D hydrostatic models in radiative equilibrium, where scattering reduces the cooling effect of strong LTE lines in the higher layers of the photosphere. Coherent line scattering also changes the temperature distribution in the high atmosphere, where we observe stronger fluctuations compared to a treatment of lines as true absorbers.
The GBS code for tokamak scrape-off layer simulations
Halpern, F. D.; Ricci, P.; Jolliet, S.; Loizu, J.; Morales, J.; Mosetto, A.; Musil, F.; Riva, F.; Tran, T. M.; Wersal, C.
2016-06-01
We describe a new version of GBS, a 3D global, flux-driven plasma turbulence code to simulate the turbulent dynamics in the tokamak scrape-off layer (SOL), superseding the code presented by Ricci et al. (2012) [14]. The present work is driven by the objective of studying SOL turbulent dynamics in medium size tokamaks and beyond with a high-fidelity physics model. We emphasize an intertwining framework of improved physics models and the computational improvements that allow them. The model extensions include neutral atom physics, finite ion temperature, the addition of a closed field line region, and a non-Boussinesq treatment of the polarization drift. GBS has been completely refactored with the introduction of a 3-D Cartesian communicator and a scalable parallel multigrid solver. We report dramatically enhanced parallel scalability, with the possibility of treating electromagnetic fluctuations very efficiently. The method of manufactured solutions as a verification process has been carried out for this new code version, demonstrating the correct implementation of the physical model.
The GBS code for tokamak scrape-off layer simulations
Halpern, F.D., E-mail: federico.halpern@epfl.ch [Ecole Polytechnique Fédérale de Lausanne (EPFL), Swiss Plasma Center (SPC), CH-1015 Lausanne (Switzerland); Ricci, P.; Jolliet, S. [Ecole Polytechnique Fédérale de Lausanne (EPFL), Swiss Plasma Center (SPC), CH-1015 Lausanne (Switzerland); Loizu, J. [Max-Planck-Institut für Plasmaphysik, D-17491, Greifswald (Germany); Morales, J.; Mosetto, A.; Musil, F.; Riva, F.; Tran, T.M.; Wersal, C. [Ecole Polytechnique Fédérale de Lausanne (EPFL), Swiss Plasma Center (SPC), CH-1015 Lausanne (Switzerland)
2016-06-15
We describe a new version of GBS, a 3D global, flux-driven plasma turbulence code to simulate the turbulent dynamics in the tokamak scrape-off layer (SOL), superseding the code presented by Ricci et al. (2012) [14]. The present work is driven by the objective of studying SOL turbulent dynamics in medium size tokamaks and beyond with a high-fidelity physics model. We emphasize an intertwining framework of improved physics models and the computational improvements that allow them. The model extensions include neutral atom physics, finite ion temperature, the addition of a closed field line region, and a non-Boussinesq treatment of the polarization drift. GBS has been completely refactored with the introduction of a 3-D Cartesian communicator and a scalable parallel multigrid solver. We report dramatically enhanced parallel scalability, with the possibility of treating electromagnetic fluctuations very efficiently. The method of manufactured solutions as a verification process has been carried out for this new code version, demonstrating the correct implementation of the physical model.
Acceleration of the OpenFOAM-based MHD solver using graphics processing units
He, Qingyun; Chen, Hongli, E-mail: hlchen1@ustc.edu.cn; Feng, Jingchao
2015-12-15
Highlights: • A 3D PISO-MHD was implemented on Kepler-class graphics processing units (GPUs) using CUDA technology. • A consistent and conservative scheme is used in the code which was validated by three basic benchmarks in a rectangular and round ducts. • Parallelized of CPU and GPU acceleration were compared relating to single core CPU in MHD problems and non-MHD problems. • Different preconditions for solving MHD solver were compared and the results showed that AMG method is better for calculations. - Abstract: The pressure-implicit with splitting of operators (PISO) magnetohydrodynamics MHD solver of the couple of Navier–Stokes equations and Maxwell equations was implemented on Kepler-class graphics processing units (GPUs) using the CUDA technology. The solver is developed on open source code OpenFOAM based on consistent and conservative scheme which is suitable for simulating MHD flow under strong magnetic field in fusion liquid metal blanket with structured or unstructured mesh. We verified the validity of the implementation on several standard cases including the benchmark I of Shercliff and Hunt's cases, benchmark II of fully developed circular pipe MHD flow cases and benchmark III of KIT experimental case. Computational performance of the GPU implementation was examined by comparing its double precision run times with those of essentially the same algorithms and meshes. The resulted showed that a GPU (GTX 770) can outperform a server-class 4-core, 8-thread CPU (Intel Core i7-4770k) by a factor of 2 at least.
Research on numerical simulation of hypersonic MHD%高超声速磁流体数值模拟研究
卜少科; 薛雅心
2014-01-01
高超声速流动情况下，气流经过强激波后温度升高，发生电离和离解，导致局部存在等离子流并进而产生诱导磁场和电场，流动经过与磁场、电场的相互作用变得更加复杂。如果在高超速流场中人为加入磁场，则可以改变流场结构，实现对流动的控制，达到减阻、热防护等目的。首先完成了磁流体力学控制方程推导，然后对FLUENT软件进行二次开发，使其具备磁流体力学控制方程即MHD的数值模拟能力，最后进行了高超声速钝头体MHD流动的数值模拟研究。%In hypersonic flows,the air temperature will increase after the strong shock wave,then ionization and dissocia-tion would occur and results in plasma stream exits locally,and thus generates induced magnetic field and electric field,so the flows become more complex after interaction. If the magnetic field is added to the high-speed flow field artificially,the flow structure would change,thus realize the control of flow,and achieve purposes of drag reduction and thermal protection. The MHD governing equations is deduced firstly,and then the secondary development of FLUENT software is conducted to achieve MHD numerical modelling capabilities. Finally a hypersonic blunt body MHD flow numerical simulation is researched.
Simulation of spreading with solidification: assessment synthesis of Thema code
Spindler, B.; Veteau, J.M. [CEA Grenoble, Direction de l' Energie Nucleaire, Dept. de Technologie Nucleaire, Service d' Etudes Thermohydrauliques et Technologiques, 38 (France)
2004-07-01
After a presentation of the models included in THEMA code, which simulates the spreading of a fluid with solidification, the whole assessment calculations are presented. The first series concerns the comparison with analytical or numerical solutions: dam break, conduction for the heat transfer in the substrate, crust growth. The second series concerns the comparison with the CORINE isothermal tests (simulating fluid at low temperature). The third series concerns the CORINE tests with heat transfer. The fourth series concerns the tests with simulating materials at medium or high temperature (RIT, KATS). The fifth series concerns the tests with prototypical materials (COMAS, FARO, VULCANO). Finally the blind simulations of the ECOKATS tests are presented. All the calculations are performed with the same physical models (THEMA version 2.5), without any variable tuning parameter according to the test under consideration. Sensitivity studies concern the influence of the viscosity model in the solidification interval, and for the tests with prototypical materials the inlet temperature and the solid fraction. The relative difference between the calculated and measured spreading areas is generally less than 20 % except for the test with prototypical materials, for which the assessment is not easy due to the large experimental uncertainties. The level of validation of THEMA is considered as satisfactory, taking into account the required accuracy. (authors)
Overview of the Tusas Code for Simulation of Dendritic Solidification
Trainer, Amelia J. [Massachusetts Inst. of Technology (MIT), Cambridge, MA (United States); Newman, Christopher Kyle [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Francois, Marianne M. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
2016-01-07
The aim of this project is to conduct a parametric investigation into the modeling of two dimensional dendrite solidification, using the phase field model. Specifically, we use the Tusas code, which is for coupled heat and phase-field simulation of dendritic solidification. Dendritic solidification, which may occur in the presence of an unstable solidification interface, results in treelike microstructures that often grow perpendicular to the rest of the growth front. The interface may become unstable if the enthalpy of the solid material is less than that of the liquid material, or if the solute is less soluble in solid than it is in liquid, potentially causing a partition [1]. A key motivation behind this research is that a broadened understanding of phase-field formulation and microstructural developments can be utilized for macroscopic simulations of phase change. This may be directly implemented as a part of the Telluride project at Los Alamos National Laboratory (LANL), through which a computational additive manufacturing simulation tool is being developed, ultimately to become part of the Advanced Simulation and Computing Program within the U.S. Department of Energy [2].
Hallo, L.; Olazabal-Loumé, M.; Maire, P. H.; Breil, J.; Morse, R.-L.; Schurtz, G.
2006-06-01
This paper deals with ablation front instabilities simulations in the context of direct drive ICF. A simplified DT target, representative of realistic target on LIL is considered. We describe here two numerical approaches: the linear perturbation method using the perturbation codes Perle (planar) and Pansy (spherical) and the direct simulation method using our Bi-dimensional hydrodynamic code Chic. Numerical solutions are shown to converge, in good agreement with analytical models.
Neoclassical Simulation of Tokamak Plasmas using Continuum Gyrokinetc Code TEMPEST
Xu, X Q
2007-11-09
We present gyrokinetic neoclassical simulations of tokamak plasmas with self-consistent electric field for the first time using a fully nonlinear (full-f) continuum code TEMPEST in a circular geometry. A set of gyrokinetic equations are discretized on a five dimensional computational grid in phase space. The present implementation is a Method of Lines approach where the phase-space derivatives are discretized with finite differences and implicit backwards differencing formulas are used to advance the system in time. The fully nonlinear Boltzmann model is used for electrons. The neoclassical electric field is obtained by solving gyrokinetic Poisson equation with self-consistent poloidal variation. With our 4D ({psi}, {theta}, {epsilon}, {mu}) version of the TEMPEST code we compute radial particle and heat flux, the Geodesic-Acoustic Mode (GAM), and the development of neoclassical electric field, which we compare with neoclassical theory with a Lorentz collision model. The present work provides a numerical scheme and a new capability for self-consistently studying important aspects of neoclassical transport and rotations in toroidal magnetic fusion devices.
EMMA: an AMR cosmological simulation code with radiative transfer
Aubert, Dominique; Ocvirk, Pierre
2015-01-01
EMMA is a cosmological simulation code aimed at investigating the reionization epoch. It handles simultaneously collisionless and gas dynamics, as well as radiative transfer physics using a moment-based description with the M1 approximation. Field quantities are stored and computed on an adaptive 3D mesh and the spatial resolution can be dynamically modified based on physically-motivated criteria. Physical processes can be coupled at all spatial and temporal scales. We also introduce a new and optional approximation to handle radiation : the light is transported at the resolution of the non-refined grid and only once the dynamics have been fully updated, whereas thermo-chemical processes are still tracked on the refined elements. Such an approximation reduces the overheads induced by the treatment of radiation physics. A suite of standard tests are presented and passed by EMMA, providing a validation for its future use in studies of the reionization epoch. The code is parallel and is able to use graphics proc...
MHD Turbulence, Turbulent Dynamo and Applications
Beresnyak, Andrey
2014-01-01
MHD Turbulence is common in many space physics and astrophysics environments. We first discuss the properties of incompressible MHD turbulence. A well-conductive fluid amplifies initial magnetic fields in a process called small-scale dynamo. Below equipartition scale for kinetic and magnetic energies the spectrum is steep (Kolmogorov -5/3) and is represented by critically balanced strong MHD turbulence. In this paper we report the basic reasoning behind universal nonlinear small-scale dynamo and the inertial range of MHD turbulence. We measured the efficiency of the small-scale dynamo $C_E=0.05$, Kolmogorov constant $C_K=4.2$ and anisotropy constant $C_A=0.63$ for MHD turbulence in high-resolution direct numerical simulations. We also discuss so-called imbalanced or cross-helical MHD turbulence which is relevant for in many objects, most prominently in the solar wind. We show that properties of incompressible MHD turbulence are similar to the properties of Alfv\\'enic part of MHD cascade in compressible turbul...
SIMULATE-4 multigroup nodal code with microscopic depletion model
Bahadir, T. [Studsvik Scandpower, Inc., Newton, MA (United States); Lindahl, St.O. [Studsvik Scandpower AB, Vasteras (Sweden); Palmtag, S.P. [Studsvik Scandpower, Inc., Idaho Falls, ID (United States)
2005-07-01
SIMULATE-4 is a three-dimensional multigroup analytical nodal code with microscopic depletion capability. It has been developed employing 'first principal models' thus avoiding ad hoc approximations. The multigroup diffusion equations or, optionally, the simplified P{sub 3} equations are solved. Cross sections are described by a hybrid microscopic-macroscopic model that includes approximately 50 heavy nuclides and fission products. Heterogeneities in the axial direction of an assembly are treated systematically. Radially, the assembly is divided into heterogeneous sub-meshes, thereby overcoming the shortcomings of spatially-averaged assembly cross sections and discontinuity factors generated with zero net-current boundary conditions. Numerical tests against higher order transport methods and critical experiments show substantial improvements compared to results of existing nodal models. (authors)
Simulating Turbulence Using the Astrophysical Discontinuous Galerkin Code TENET
Bauer, Andreas; Springel, Volker; Chandrashekar, Praveen; Pakmor, Rüdiger; Klingenberg, Christian
2016-01-01
In astrophysics, the two main methods traditionally in use for solving the Euler equations of ideal fluid dynamics are smoothed particle hydrodynamics and finite volume discretization on a stationary mesh. However, the goal to efficiently make use of future exascale machines with their ever higher degree of parallel concurrency motivates the search for more efficient and more accurate techniques for computing hydrodynamics. Discontinuous Galerkin (DG) methods represent a promising class of methods in this regard, as they can be straightforwardly extended to arbitrarily high order while requiring only small stencils. Especially for applications involving comparatively smooth problems, higher-order approaches promise significant gains in computational speed for reaching a desired target accuracy. Here, we introduce our new astrophysical DG code TENET designed for applications in cosmology, and discuss our first results for 3D simulations of subsonic turbulence. We show that our new DG implementation provides ac...
VISRAD, 3-D Target Design and Radiation Simulation Code
Golovkin, Igor; Macfarlane, Joseph; Golovkina, Viktoriya
2016-10-01
The 3-D view factor code VISRAD is widely used in designing HEDP experiments at major laser and pulsed-power facilities, including NIF, OMEGA, OMEGA-EP, ORION, LMJ, Z, and PLX. It simulates target designs by generating a 3-D grid of surface elements, utilizing a variety of 3-D primitives and surface removal algorithms, and can be used to compute the radiation flux throughout the surface element grid by computing element-to-element view factors and solving power balance equations. Target set-up and beam pointing are facilitated by allowing users to specify positions and angular orientations using a variety of coordinates systems (e.g., that of any laser beam, target component, or diagnostic port). Analytic modeling for laser beam spatial profiles for OMEGA DPPs and NIF CPPs is used to compute laser intensity profiles throughout the grid of surface elements. We will discuss recent improvements to the software package and plans for future developments.
The Plasma Simulation Code: A modern particle-in-cell code with patch-based load-balancing
Germaschewski, Kai; Fox, William; Abbott, Stephen; Ahmadi, Narges; Maynard, Kristofor; Wang, Liang; Ruhl, Hartmut; Bhattacharjee, Amitava
2016-08-01
This work describes the Plasma Simulation Code (PSC), an explicit, electromagnetic particle-in-cell code with support for different order particle shape functions. We review the basic components of the particle-in-cell method as well as the computational architecture of the PSC code that allows support for modular algorithms and data structure in the code. We then describe and analyze in detail a distinguishing feature of PSC: patch-based load balancing using space-filling curves which is shown to lead to major efficiency gains over unbalanced methods and a previously used simpler balancing method.
Merlin, Emiliano; Grassi, Tommaso; Piovan, Lorenzo; Chiosi, Cesare
2009-01-01
We present EvoL, the new release of the Padova N-body code for cosmological simulations of galaxy formation and evolution. In this paper, the basic Tree + SPH code is presented and analysed, together with an overview on the software architectures. EvoL is a flexible parallel Fortran95 code, specifically designed for simulations of cosmological structure formation on cluster, galactic and sub-galactic scales. EvoL is a fully Lagrangian self-adaptive code, based on the classical Oct-tree and on the Smoothed Particle Hydrodynamics algorithm. It includes special features such as adaptive softening lengths with correcting extra-terms, and modern formulations of SPH and artificial viscosity. It is designed to be run in parallel on multiple CPUs to optimize the performance and save computational time. We describe the code in detail, and present the results of a number of standard hydrodynamical tests.
Simard, Corinne; Charbonneau, Paul; Dubé, Caroline
2016-10-01
We perform a mean-field analysis of the EULAG-MHD millenium simulation of global magnetohydrodynamical convection presented in Passos and Charbonneau (2014). The turbulent electromotive force (emf) operating in the simulation is assumed to be linearly related to the cyclic axisymmetric mean magnetic field and its first spatial derivatives. At every grid point in the simulation's meridional plane, this assumed relationship involves 27 independent tensorial coefficients. Expanding on Racine et al. (2011), we extract these coefficients from the simulation data through a least-squares minimization procedure based on singular value decomposition. The reconstructed α -tensor shows good agreement with that obtained by Racine et al. (2011), who did not include derivatives of the mean-field in their fit, as well as with the α -tensor extracted by Augustson et al. (2015) from a distinct ASH MHD simulation. The isotropic part of the turbulent magnetic diffusivity tensor β is positive definite and reaches values of 5.0 ×107 m2 s-1 in the middle of the convecting fluid layers. The spatial variations of both αϕϕ and βϕϕ component are well reproduced by expressions obtained under the Second Order Correlation Approximation, with a good matching of amplitude requiring a turbulent correlation time about five times smaller than the estimated turnover time of the small-scale turbulent flow. By segmenting the simulation data into epochs of magnetic cycle minima and maxima, we also measure α - and β -quenching. We find the magnetic quenching of the α -effect to be driven primarily by a reduction of the small-scale flow's kinetic helicity, with variations of the current helicity playing a lesser role in most locations in the simulation domain. Our measurements of turbulent diffusivity quenching are restricted to the βϕϕ component, but indicate a weaker quenching, by a factor of ≃ 1.36, than of the α -effect, which in our simulation drops by a factor of three between
Li, Pak Shing; Klein, Richard I. [Astronomy Department, University of California, Berkeley, CA 94720 (United States); Martin, Daniel F. [Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720 (United States); McKee, Christopher F., E-mail: psli@astron.berkeley.edu, E-mail: klein@astron.berkeley.edu, E-mail: DFMartin@lbl.gov, E-mail: cmckee@astro.berkeley.edu [Physics Department and Astronomy Department, University of California, Berkeley, CA 94720 (United States)
2012-02-01
Performing a stable, long-duration simulation of driven MHD turbulence with a high thermal Mach number and a strong initial magnetic field is a challenge to high-order Godunov ideal MHD schemes because of the difficulty in guaranteeing positivity of the density and pressure. We have implemented a robust combination of reconstruction schemes, Riemann solvers, limiters, and constrained transport electromotive force averaging schemes that can meet this challenge, and using this strategy, we have developed a new adaptive mesh refinement (AMR) MHD module of the ORION2 code. We investigate the effects of AMR on several statistical properties of a turbulent ideal MHD system with a thermal Mach number of 10 and a plasma {beta}{sub 0} of 0.1 as initial conditions; our code is shown to be stable for simulations with higher Mach numbers (M{sub rms}= 17.3) and smaller plasma beta ({beta}{sub 0} = 0.0067) as well. Our results show that the quality of the turbulence simulation is generally related to the volume-averaged refinement. Our AMR simulations show that the turbulent dissipation coefficient for supersonic MHD turbulence is about 0.5, in agreement with unigrid simulations.
Beam-beam simulation code BBSIM for particle accelerators
Kim, Hyung J.; Sen, Tanaji; /Fermilab
2011-01-01
A highly efficient, fully parallelized, six-dimensional tracking model for simulating interactions of colliding hadron beams in high energy ring colliders and simulating schemes for mitigating their effects is described. The model uses the weak-strong approximation for calculating the head-on interactions when the test beam has lower intensity than the other beam, a look-up table for the efficient calculation of long-range beam-beam forces, and a self-consistent Poisson solver when both beams have comparable intensities. A performance test of the model in a parallel environment is presented. The code is used to calculate beam emittance and beam loss in the Tevatron at Fermilab and compared with measurements. They also present results from the studies of stwo schemes proposed to compensate the beam-beam interactions: (a) the compensation of long-range interactions in the Relativistic Heavy Ion Collider (RHIC) at Brookhaven and the Large Hadron Collider (LHC) at CERN with a current carrying wire, (b) the use of a low energy electron beam to compensate the head-on interactions in RHIC.
Beam-beam simulation code BBSIM for particle accelerators
Kim, Hyung J.; Sen, Tanaji; /Fermilab
2011-01-01
A highly efficient, fully parallelized, six-dimensional tracking model for simulating interactions of colliding hadron beams in high energy ring colliders and simulating schemes for mitigating their effects is described. The model uses the weak-strong approximation for calculating the head-on interactions when the test beam has lower intensity than the other beam, a look-up table for the efficient calculation of long-range beam-beam forces, and a self-consistent Poisson solver when both beams have comparable intensities. A performance test of the model in a parallel environment is presented. The code is used to calculate beam emittance and beam loss in the Tevatron at Fermilab and compared with measurements. They also present results from the studies of stwo schemes proposed to compensate the beam-beam interactions: (a) the compensation of long-range interactions in the Relativistic Heavy Ion Collider (RHIC) at Brookhaven and the Large Hadron Collider (LHC) at CERN with a current carrying wire, (b) the use of a low energy electron beam to compensate the head-on interactions in RHIC.
Federrath, Christoph; Schleicher, Dominik R G; Banerjee, Robi; Klessen, Ralf S
2011-01-01
Cosmic structure formation is characterized by the complex interplay between gravity, turbulence, and magnetic fields. The processes by which gravitational energy is converted into turbulent and magnetic energies, however, remain poorly understood. Here, we show with high-resolution, adaptive-mesh simulations that MHD turbulence is efficiently driven by extracting energy from the gravitational potential during the collapse of a dense gas cloud. Compressible motions generated during the contraction are converted into solenoidal, turbulent motions, leading to a natural energy ratio of E_sol/E_tot of approximately 2/3. We find that the energy injection scale of gravity-driven turbulence is close to the local Jeans scale. If small seeds of the magnetic field are present, they are amplified exponentially fast via the small-scale dynamo process. The magnetic field grows most efficiently on the smallest scales, for which the stretching, twisting, and folding of field lines, and the turbulent vortices are sufficientl...
Ozturk, Dogacan Su; Zou, Shasha; Slavin, James A.
2017-05-01
During sudden solar wind dynamic pressure enhancements, the magnetosphere undergoes rapid compression resulting in a reconfiguration of the global current systems, most notably the field-aligned currents (FACs). Ground-based magnetometers are traditionally used to study such compression events. However, factors affecting the polarity and magnitude of the ground-based magnetic perturbations are still not well understood. In particular, interplanetary magnetic field (IMF) By is known to create significant asymmetries in the FAC patterns. We use the University of Michigan Block Adaptive Tree Roe Upwind Scheme (BATS'R'US) magnetohydrodynamic code to investigate the effects of IMF By on the global variations of ground magnetic perturbations during solar wind dynamic pressure enhancements. Using virtual magnetometers in three idealized simulations with varying IMF By, we find asymmetries in the peak amplitude and magnetic local time of the ground magnetic perturbations during the preliminary impulse (PI) and the main impulse (MI) phases. These asymmetries are especially evident at high-latitude ground magnetometer responses where the peak amplitudes differ by 50 nT at different locations. We show that the FACs related with the PI are due to magnetopause deformation, and the FACs related with the MI are generated by vortical flows within the magnetosphere, consistent with other simulation results. The perturbation FACs due to pressure enhancements and their magnetospheric sources do not differ much under different IMF By polarities. However, the conductance profile affected by the superposition of the preexisting FACs and the perturbation FACs including their closure currents is responsible for the magnitude and location asymmetries in the ground magnetic perturbations.
Aoki, Isao; Seki, Yasushi [Japan Atomic Energy Research Inst., Naka, Ibaraki (Japan). Naka Fusion Research Establishment; Sasaki, Makoto; Shintani, Kiyonori; Kim, Yeong-Chan
1997-11-01
A dynamic simulation code for the fuel cycle of a fusion experimental reactor has been developed. The code follows the fuel inventory change with time in the plasma chamber and the fuel cycle system during a single pulse operation. The time dependence of the fuel inventory distribution is evaluated considering the fuel burn and exhaust in the plasma chamber, purification and supply functions. For each subsystem of the plasma chamber and the fuel cycle system, the fuel inventory equation is written based on the equation of state considering the function of fuel burn, exhaust, purification, and supply. The processing constants of subsystem for the steady states were taken from the values in the ITER Conceptual Design Activity (CDA) report. Using the code, the time dependence of the fuel supply and inventory depending on the burn state and subsystem processing functions are shown. (author)
A comparative study of MONTEBURNS and MCNPX 2.6.0 codes in ADS simulations
Barros, Graiciany P.; Pereira, Claubia; Veloso, Maria A.F.; Velasquez, Carlos E.; Costa, Antonella L., E-mail: gbarros@ufmg.br, E-mail: claubia@nuclear.ufmg.br [Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, MG (Brazil). Dept. de Engenharia Nuclear
2013-07-01
The possible use of the MONTEBURNS and MCNPX 2.6.0 codes in Accelerator-driven systems (ADSs) simulations for fuel evolution description is discussed. ADSs are investigated for fuel breeding and long-lived fission product transmutation so simulations of fuel evolution have a great relevance. The burnup/depletion capability is present in both studied codes. MONTEBURNS code links Monte Carlo N-Particle Transport Code (MCNP) to the radioactive decay burnup code ORIGEN2, whereas MCNPX depletion/ burnup capability is a linked process involving steady-state flux calculations by MCNPX and nuclide depletion calculations by CINDER90. A lead-cooled accelerator-driven system fueled with thorium was simulated and the results obtained using MONTEBURNS code and the results from MCNPX 2.6.0 code were compared. The system criticality and the variation of the actinide inventory during the burnup were evaluated and the results indicate a similar behavior between the results of each code. (author)
The Plasma Simulation Code: A modern particle-in-cell code with load-balancing and GPU support
Germaschewski, Kai; Ahmadi, Narges; Wang, Liang; Abbott, Stephen; Ruhl, Hartmut; Bhattacharjee, Amitava
2013-01-01
Recent increases in supercomputing power, driven by the multi-core revolution and accelerators such as the IBM Cell processor, graphics processing units (GPUs) and Intel's Many Integrated Core (MIC) technology have enabled kinetic simulations of plasmas at unprecedented resolutions, but changing HPC architectures also come with challenges for writing efficient numerical codes. This paper describes the Plasma Simulation Code (PSC), an explicit, electromagnetic particle-in-cell code with support for different order particle shape functions. We focus on two distinguishing feature of the code: patch-based load balancing using space-filling curves, and support for Nvidia GPUs, which achieves substantial speed-up of up to more than 6x on the Cray XK7 architecture compared to a CPU-only implementation.
Ng, C S; Germaschewski, K; Pouquet, A; Bhattacharjee, A
2007-01-01
A recently developed spectral-element adaptive refinement incompressible magnetohydrodynamic (MHD) code [Rosenberg, Fournier, Fischer, Pouquet, J. Comp. Phys. 215, 59-80 (2006)] is applied to simulate the problem of MHD island coalescence instability (MICI) in two dimensions. MICI is a fundamental MHD process that can produce sharp current layers and subsequent reconnection and heating in a high-Lundquist number plasma such as the solar corona [Ng and Bhattacharjee, Phys. Plasmas, 5, 4028 (1998)]. Due to the formation of thin current layers, it is highly desirable to use adaptively or statically refined grids to resolve them, and to maintain accuracy at the same time. The output of the spectral-element static adaptive refinement simulations are compared with simulations using a finite difference method on the same refinement grids, and both methods are compared to pseudo-spectral simulations with uniform grids as baselines. It is shown that with the statically refined grids roughly scaling linearly with effec...
Jia, Xianzhe; Slavin, James A.; Gombosi, Tamas I.; Daldorff, Lars K. S.; Toth, Gabor; Holst, Bart
2015-06-01
Mercury's comparatively weak intrinsic magnetic field and its close proximity to the Sun lead to a magnetosphere that undergoes more direct space-weathering interactions than other planets. A unique aspect of Mercury's interaction system arises from the large ratio of the scale of the planet to the scale of the magnetosphere and the presence of a large-size core composed of highly conducting material. Consequently, there is strong feedback between the planetary interior and the magnetosphere, especially under conditions of strong external forcing. Understanding the coupled solar wind-magnetosphere-interior interaction at Mercury requires not only analysis of observations but also a modeling framework that is both comprehensive and inclusive. We have developed a new global MHD model for Mercury in which the planetary interior is modeled as layers of different electrical conductivities that electromagnetically couple to the surrounding plasma environment. This new modeling capability allows us to characterize the dynamical response of Mercury to time-varying external conditions in a self-consistent manner. Comparison of our model results with observations by the MErcury Surface, Space ENvironment, GEochemistry, and Ranging (MESSENGER) spacecraft shows that the model provides a reasonably good representation of the global magnetosphere. To demonstrate the capability to model induction effects, we have performed idealized simulations in which Mercury's magnetosphere is impacted by a solar wind pressure enhancement. Our results show that due to the induction effect, Mercury's core exerts strong global influences on the way Mercury responds to changes in the external environment, including modifying the global magnetospheric structure and affecting the extent to which the solar wind directly impacts the surface. The global MHD model presented here represents a crucial step toward establishing a modeling framework that enables self-consistent characterization of Mercury
ANNarchy: a code generation approach to neural simulations on parallel hardware
Julien eVitay
2015-07-01
Full Text Available Many modern neural simulators focus on the simulation of networks of spiking neurons on parallel hardware. Another important framework in computational neuroscience, rate-coded neural networks, is mostly difficult or impossible to implement using these simulators. We present here the ANNarchy (Artificial Neural Networks architect neural simulator, which allows to easily define and simulate rate-coded and spiking networks, as well as combinations of both. The interface in Python has been designed to be close to the PyNN interface, while the definition of neuron and synapse models can be specified using an equation-oriented mathematical description similar to the Brian neural simulator. This information is used to generate C++ code that will efficiently perform the simulation on the chosen parallel hardware (multi-core system or graphical processing unit. Several numerical methods are available to transform ordinary differential equations into an efficient C++ code. We compare the parallel performance of the simulator to existing solutions.
ANNarchy: a code generation approach to neural simulations on parallel hardware.
Vitay, Julien; Dinkelbach, Helge Ü; Hamker, Fred H
2015-01-01
Many modern neural simulators focus on the simulation of networks of spiking neurons on parallel hardware. Another important framework in computational neuroscience, rate-coded neural networks, is mostly difficult or impossible to implement using these simulators. We present here the ANNarchy (Artificial Neural Networks architect) neural simulator, which allows to easily define and simulate rate-coded and spiking networks, as well as combinations of both. The interface in Python has been designed to be close to the PyNN interface, while the definition of neuron and synapse models can be specified using an equation-oriented mathematical description similar to the Brian neural simulator. This information is used to generate C++ code that will efficiently perform the simulation on the chosen parallel hardware (multi-core system or graphical processing unit). Several numerical methods are available to transform ordinary differential equations into an efficient C++code. We compare the parallel performance of the simulator to existing solutions.
Hallo, L.; Olazabal-Loume, M.; Maire, P.H.; Breil, J.; Schurtz, G. [CELIA, 33 - Talence (France); Morse, R.L. [Arizona Univ., Dept. of Nuclear Engineering, Tucson (United States)
2006-06-15
This paper deals with ablation front instabilities simulations in the context of direct drive inertial confinement fusion. A simplified deuterium-tritium target, representative of realistic target on LIL (laser integration line at Megajoule laser facility) is considered. We describe here two numerical approaches: the linear perturbation method using the perturbation codes Perle (planar) and Pansy (spherical) and the direct simulation method using our bi-dimensional hydrodynamic code Chic. Our work shows a good behaviour of all methods even for large wavenumbers during the acceleration phase of the ablation front. We also point out a good agreement between model and numerical predictions at ablation front during the shock wave transit.
Fromang, S; Teyssier, R
2006-01-01
In this paper, we present a new method to perform numerical simulations of astrophysical MHD flows using the Adaptive Mesh Refinement framework and Constrained Transport. The algorithm is based on a previous work in which the MUSCL--Hancock scheme was used to evolve the induction equation. In this paper, we detail the extension of this scheme to the full MHD equations and discuss its properties. Through a series of test problems, we illustrate the performances of this new code using two different MHD Riemann solvers (Lax-Friedrich and Roe) and the need of the Adaptive Mesh Refinement capabilities in some cases. Finally, we show its versatility by applying it to two completely different astrophysical situations well studied in the past years: the growth of the magnetorotational instability in the shearing box and the collapse of magnetized cloud cores. We have implemented this new Godunov scheme to solve the ideal MHD equations in the AMR code RAMSES. It results in a powerful tool that can be applied to a grea...
Feasibility Analysis on Simulation of PLCS Malfunction Event using SPACE Code
Kim, Ung Soo; Lee, Cheol Shin; Sohn, Jong Joo [KEPCO-E and C, Daejeon (Korea, Republic of)
2011-10-15
A computer code named 'Safety and Performance Analysis Code (SPACE)' has been being developed in order to replace several existing computer codes used in designing nuclear power plant (NPP) in Korea. This SPACE code is a system code and should be able to simulate various plant events, needed for safety analysis of pressurized water reactors (PWRs), such as loss of coolant accident (LOCA), steam line break (SLB), feedwater line break (FLB), steam generator tube rupture (SGTR), and several anticipated operational occurrences (AOOs). Therefore, respective simulations of above events with the SPACE code should be verified and validated to utilize this code in the safety analysis. In this work, a feasibility analysis is performed for the simulation of pressurizer level control system (PLCS) malfunction event for the Shin-Kori units 3 and 4 (SKN 3 and 4)
D'Avillez, M A; Breitschwerdt, Dieter
2005-01-01
State of the art models of the ISM use adaptive mesh refinement to capture small scale structures, by refining on the fly those regions of the grid where density and pressure gradients occur, keeping at the same time the existing resolution in the other regions. With this technique it became possible to study the ISM in star-forming galaxies in a global way by following matter circulation between stars and the interstellar gas, and, in particular the energy input by random and clustered supernova explosions, which determine the dynamical and chemical evolution of the ISM, and hence of the galaxy as a whole. In this paper we review the conditions for a self-consistent modelling of the ISM and present the results from the latest developments in the 3D HD/MHD global models of the ISM. Special emphasis is put on the effects of the magnetic field with respect to the volume and mass fractions of the different ISM ``phases'', the relative importance of ram, thermal and magnetic pressures, and whether the field can p...
2006-09-01
Aerospace Applications, AIAA-Paper 96-2355, New Orleans, 1996 2. V.A.Bityurin, A.N.Bocharov, J.Lineberry, MHD Aerospace Applications, Invited Lecture ...Paper 2003- 4303, Orlando, FL 8. V.A.Bityurin, Prospective of MHD Interaction in Hypersonic and Propulsion Technologies, In: von Karman Series : Lectures ...Efforts in MHD AeoSpace Applications, In: von Karman Series : Lectures , Introduction of Magneto-Fluid Dynamics for AeroSpace Applications, von Karman
SITA version 0. A simulation and code testing assistant for TOUGH2 and MARNIE
Seher, Holger; Navarro, Martin
2016-06-15
High quality standards have to be met by those numerical codes that are applied in long-term safety assessments for deep geological repositories for radioactive waste. The software environment SITA (''a simulation and code testing assistant for TOUGH2 and MARNIE'') has been developed by GRS in order to perform automated regression testing for the flow and transport simulators TOUGH2 and MARNIE. GRS uses the codes TOUGH2 and MARNIE in order to assess the performance of deep geological repositories for radioactive waste. With SITA, simulation results of TOUGH2 and MARNIE can be compared to analytical solutions and simulations results of other code versions. SITA uses data interfaces to operate with codes whose input and output depends on the code version. The present report is part of a wider GRS programme to assure and improve the quality of TOUGH2 and MARNIE. It addresses users as well as administrators of SITA.
McKinney, Jonathan C; Sadowski, Aleksander; Narayan, Ramesh
2013-01-01
Black hole (BH) accretion flows and jets are dynamic hot relativistic magnetized plasma flows whose radiative opacity can significantly affect flow structure and behavior. We describe a numerical scheme, tests, and an astrophysically relevant application using the M1 radiation closure within a new three-dimensional (3D) general relativistic (GR) radiation (R) magnetohydrodynamics (MHD) massively parallel code called HARMRAD. Our 3D GRRMHD simulation of super-Eddington accretion (about $20$ times Eddington) onto a rapidly rotating BH (dimensionless spin $j=0.9375$) shows sustained non-axisymmemtric disk turbulence, a persistent electromagnetic jet driven by the Blandford-Znajek effect, and a total radiative output consistently near the Eddington rate. The total accretion efficiency is of order $20\\%$, the large-scale electromagnetic jet efficiency is of order $10\\%$, and the total radiative efficiency that reaches large distances remains low at only order $1\\%$. However, the radiation jet and the electromagnet...
DgSMC-B code: A robust and autonomous direct simulation Monte Carlo code for arbitrary geometries
Kargaran, H.; Minuchehr, A.; Zolfaghari, A.
2016-07-01
In this paper, we describe the structure of a new Direct Simulation Monte Carlo (DSMC) code that takes advantage of combinatorial geometry (CG) to simulate any rarefied gas flows Medias. The developed code, called DgSMC-B, has been written in FORTRAN90 language with capability of parallel processing using OpenMP framework. The DgSMC-B is capable of handling 3-dimensional (3D) geometries, which is created with first-and second-order surfaces. It performs independent particle tracking for the complex geometry without the intervention of mesh. In addition, it resolves the computational domain boundary and volume computing in border grids using hexahedral mesh. The developed code is robust and self-governing code, which does not use any separate code such as mesh generators. The results of six test cases have been presented to indicate its ability to deal with wide range of benchmark problems with sophisticated geometries such as airfoil NACA 0012. The DgSMC-B code demonstrates its performance and accuracy in a variety of problems. The results are found to be in good agreement with references and experimental data.
JIANGuangde; DONGJiaqi
2003-01-01
A numerical simulation code has been established with particle simulation method in order to study the gyro-kinetic equations for the electrostatic electron temperature gradient modes in toroidal plasmas. The flowchart is given as well for the code. The fourth-order adaptive step-size scheme is adopted, that saves computer time and is simple. The calculation code is useful for the research of the electron temperature gradient instability.
Huang, Zhenguang; Tóth, Gábor; Gombosi, Tamas I.; Jia, Xianzhe; Rubin, Martin; Fougere, Nicolas; Tenishev, Valeriy; Combi, Michael R.; Bieler, Andre; Hansen, Kenneth C.; Shou, Yinsi; Altwegg, Kathrin
2016-05-01
The neutral and plasma environment is critical in understanding the interaction of the solar wind and comet 67P/Churyumov-Gerasimenko (CG), the target of the European Space Agency's Rosetta mission. To serve this need and support the Rosetta mission, we have developed a 3-D four-fluid model, which is based on BATS-R-US (Block-Adaptive Tree Solarwind Roe-type Upwind Scheme) within SWMF (Space Weather Modeling Framework) that solves the governing multifluid MHD equations and the Euler equations for the neutral gas fluid. These equations describe the behavior and interactions of the cometary heavy ions, the solar wind protons, the electrons, and the neutrals. This model incorporates different mass loading processes, including photoionization and electron impact ionization, charge exchange, dissociative ion-electron recombination, and collisional interactions between different fluids. We simulated the plasma and neutral gas environment near perihelion in three different cases: an idealized comet with a spherical body and uniform neutral gas outflow, an idealized comet with a spherical body and illumination-driven neutral gas outflow, and comet CG with a realistic shape model and illumination-driven neutral gas outflow. We compared the results of the three cases and showed that the simulations with illumination-driven neutral gas outflow have magnetic reconnection, a magnetic pileup region and nucleus directed plasma flow inside the nightside reconnection region, which have not been reported in the literature.
Burkhardt, Joerg
2013-07-01
The courses and consequences of severe accidents in nuclear power plants are usually simulated with the help of so called Lumped Parameter-Codes which are especially designed for this purpose. These codes are able to simulate complex physical phenomena within short computing times since they are based on a simplified zone principle. Furthermore they are provided with a simplified flow model basis. This dissertation aims at the ability of the German Containment Code System (COCOSYS) to simulate local accumulations of hydrogen. During severe accidents with a melting reactor core (as in Harrisburg or Fukushima) hydrogen can be generated and then be released to the containment. In case of a local accumulation a detonation can occur that endangers the buildings integrity. The results show that the development and the erosion of these hydrogen accumulations based on bouant flows are qualitatively well simulated. From a systematic grid study general rules concerning the simulation of the stratification erosion have been derivated. Those have been applied and confirmed by several blind code-benchmarks. A detailed analysis has shown that the simulated erosion rate and the resistance of simulated hydrogen accumulations are directly related to the grid discretisation chosen by the user. Based upon this analysis a model concept has been developed, which is able to detect hydrogen accumulations and to determine their intensity of interaction with impinging flows by non-dimensional numbers. The erosion flow is controlled by adjusting local grid effects. The model is in the development phase.
MHD Turbulence and Magnetic Dynamos
Shebalin, John V
2014-01-01
Incompressible magnetohydrodynamic (MHD) turbulence and magnetic dynamos, which occur in magnetofluids with large fluid and magnetic Reynolds numbers, will be discussed. When Reynolds numbers are large and energy decays slowly, the distribution of energy with respect to length scale becomes quasi-stationary and MHD turbulence can be described statistically. In the limit of infinite Reynolds numbers, viscosity and resistivity become zero and if these values are used in the MHD equations ab initio, a model system called ideal MHD turbulence results. This model system is typically confined in simple geometries with some form of homogeneous boundary conditions, allowing for velocity and magnetic field to be represented by orthogonal function expansions. One advantage to this is that the coefficients of the expansions form a set of nonlinearly interacting variables whose behavior can be described by equilibrium statistical mechanics, i.e., by a canonical ensemble theory based on the global invariants (energy, cross helicity and magnetic helicity) of ideal MHD turbulence. Another advantage is that truncated expansions provide a finite dynamical system whose time evolution can be numerically simulated to test the predictions of the associated statistical mechanics. If ensemble predictions are the same as time averages, then the system is said to be ergodic; if not, the system is nonergodic. Although it had been implicitly assumed in the early days of ideal MHD statistical theory development that these finite dynamical systems were ergodic, numerical simulations provided sufficient evidence that they were, in fact, nonergodic. Specifically, while canonical ensemble theory predicted that expansion coefficients would be (i) zero-mean random variables with (ii) energy that decreased with length scale, it was found that although (ii) was correct, (i) was not and the expected ergodicity was broken. The exact cause of this broken ergodicity was explained, after much
Comparison of DAC and MONACO DSMC Codes with Flat Plate Simulation
Padilla, Jose F.
2010-01-01
Various implementations of the direct simulation Monte Carlo (DSMC) method exist in academia, government and industry. By comparing implementations, deficiencies and merits of each can be discovered. This document reports comparisons between DSMC Analysis Code (DAC) and MONACO. DAC is NASA's standard DSMC production code and MONACO is a research DSMC code developed in academia. These codes have various differences; in particular, they employ distinct computational grid definitions. In this study, DAC and MONACO are compared by having each simulate a blunted flat plate wind tunnel test, using an identical volume mesh. Simulation expense and DSMC metrics are compared. In addition, flow results are compared with available laboratory data. Overall, this study revealed that both codes, excluding grid adaptation, performed similarly. For parallel processing, DAC was generally more efficient. As expected, code accuracy was mainly dependent on physical models employed.
Safety and reliability in superconducting MHD magnets
Laverick, C.; Powell, J.; Hsieh, S.; Reich, M.; Botts, T.; Prodell, A.
1979-07-01
This compilation adapts studies on safety and reliability in fusion magnets to similar problems in superconducting MHD magnets. MHD base load magnet requirements have been identified from recent Francis Bitter National Laboratory reports and that of other contracts. Information relevant to this subject in recent base load magnet design reports for AVCO - Everett Research Laboratories and Magnetic Corporation of America is included together with some viewpoints from a BNL workshop on structural analysis needed for superconducting coils in magnetic fusion energy. A summary of design codes used in large bubble chamber magnet design is also included.
Evolutionary Conditions in the Dissipative MHD System Revisited
Inoue, Tsuyoshi
2007-01-01
The evolutionary conditions for the dissipative continuous magnetohydrodynamic (MHD) shocks are studied. We modify Hada's approach in the stability analysis of the MHD shock waves. The matching conditions between perturbed shock structure and asymptotic wave modes shows that all types of the MHD shocks, including the intermediate shocks, are evolutionary and perturbed solutions are uniquely defined. We also adopt our formalism to the MHD shocks in the system with resistivity without viscosity, which is often used in numerical simulation, and show that all types of shocks that are found in the system satisfy the evolutionary condition and perturbed solutions are uniquely defined. These results suggest that the intermediate shocks may appear in reality.
Neutral Particle Transport in Cylindrical Plasma Simulated by a Monte Carlo Code
YU Deliang; YAN Longwen; ZHONG Guangwu; LU Jie; YI Ping
2007-01-01
A Monte Carlo code (MCHGAS) has been developed to investigate the neutral particle transport.The code can calculate the radial profile and energy spectrum of neutral particles in cylindrical plasmas.The calculation time of the code is dramatically reduced when the Splitting and Roulette schemes are applied. The plasma model of an infinite cylinder is assumed in the code,which is very convenient in simulating neutral particle transports in small and middle-sized tokamaks.The design of the multi-channel neutral particle analyser (NPA) on HL-2A can be optimized by using this code.
2005-01-01
Tech-X Corporation releases simulation code for solving complex problems in plasma physics : VORPAL code provides a robust environment for simulating plasma processes in high-energy physics, IC fabrications and material processing applications
Punzalan, Florencio Rusty; Kunieda, Yoshitoshi; Amano, Akira
2015-01-01
Clinical and experimental studies involving human hearts can have certain limitations. Methods such as computer simulations can be an important alternative or supplemental tool. Physiological simulation at the tissue or organ level typically involves the handling of partial differential equations (PDEs). Boundary conditions and distributed parameters, such as those used in pharmacokinetics simulation, add to the complexity of the PDE solution. These factors can tailor PDE solutions and their corresponding program code to specific problems. Boundary condition and parameter changes in the customized code are usually prone to errors and time-consuming. We propose a general approach for handling PDEs and boundary conditions in computational models using a replacement scheme for discretization. This study is an extension of a program generator that we introduced in a previous publication. The program generator can generate code for multi-cell simulations of cardiac electrophysiology. Improvements to the system allow it to handle simultaneous equations in the biological function model as well as implicit PDE numerical schemes. The replacement scheme involves substituting all partial differential terms with numerical solution equations. Once the model and boundary equations are discretized with the numerical solution scheme, instances of the equations are generated to undergo dependency analysis. The result of the dependency analysis is then used to generate the program code. The resulting program code are in Java or C programming language. To validate the automatic handling of boundary conditions in the program code generator, we generated simulation code using the FHN, Luo-Rudy 1, and Hund-Rudy cell models and run cell-to-cell coupling and action potential propagation simulations. One of the simulations is based on a published experiment and simulation results are compared with the experimental data. We conclude that the proposed program code generator can be used to
Florencio Rusty Punzalan
Full Text Available Clinical and experimental studies involving human hearts can have certain limitations. Methods such as computer simulations can be an important alternative or supplemental tool. Physiological simulation at the tissue or organ level typically involves the handling of partial differential equations (PDEs. Boundary conditions and distributed parameters, such as those used in pharmacokinetics simulation, add to the complexity of the PDE solution. These factors can tailor PDE solutions and their corresponding program code to specific problems. Boundary condition and parameter changes in the customized code are usually prone to errors and time-consuming. We propose a general approach for handling PDEs and boundary conditions in computational models using a replacement scheme for discretization. This study is an extension of a program generator that we introduced in a previous publication. The program generator can generate code for multi-cell simulations of cardiac electrophysiology. Improvements to the system allow it to handle simultaneous equations in the biological function model as well as implicit PDE numerical schemes. The replacement scheme involves substituting all partial differential terms with numerical solution equations. Once the model and boundary equations are discretized with the numerical solution scheme, instances of the equations are generated to undergo dependency analysis. The result of the dependency analysis is then used to generate the program code. The resulting program code are in Java or C programming language. To validate the automatic handling of boundary conditions in the program code generator, we generated simulation code using the FHN, Luo-Rudy 1, and Hund-Rudy cell models and run cell-to-cell coupling and action potential propagation simulations. One of the simulations is based on a published experiment and simulation results are compared with the experimental data. We conclude that the proposed program code
The FLUKA code: An accurate simulation tool for particle therapy
Battistoni, Giuseppe; Böhlen, Till T; Cerutti, Francesco; Chin, Mary Pik Wai; Dos Santos Augusto, Ricardo M; Ferrari, Alfredo; Garcia Ortega, Pablo; Kozlowska, Wioletta S; Magro, Giuseppe; Mairani, Andrea; Parodi, Katia; Sala, Paola R; Schoofs, Philippe; Tessonnier, Thomas; Vlachoudis, Vasilis
2016-01-01
Monte Carlo (MC) codes are increasingly spreading in the hadrontherapy community due to their detailed description of radiation transport and interaction with matter. The suitability of a MC code for application to hadrontherapy demands accurate and reliable physical models capable of handling all components of the expected radiation field. This becomes extremely important for correctly performing not only physical but also biologically-based dose calculations, especially in cases where ions heavier than protons are involved. In addition, accurate prediction of emerging secondary radiation is of utmost importance in innovative areas of research aiming at in-vivo treatment verification. This contribution will address the recent developments of the FLUKA MC code and its practical applications in this field. Refinements of the FLUKA nuclear models in the therapeutic energy interval lead to an improved description of the mixed radiation field as shown in the presented benchmarks against experimental data with bot...
Implementation and performance of FDPS: A Framework Developing Parallel Particle Simulation Codes
Iwasawa, Masaki; Hosono, Natsuki; Nitadori, Keigo; Muranushi, Takayuki; Makino, Junichiro
2016-01-01
We have developed FDPS (Framework for Developing Particle Simulator), which enables researchers and programmers to develop high-performance parallel particle simulation codes easily. The basic idea of FDPS is to separate the program code for complex parallelization including domain decomposition, redistribution of particles, and exchange of particle information for interaction calculation between nodes, from actual interaction calculation and orbital integration. FDPS provides the former part and the users write the latter. Thus, a user can implement a high-performance fully parallelized $N$-body code only in 120 lines. In this paper, we present the structure and implementation of FDPS, and describe its performance on three sample applications: disk galaxy simulation, cosmological simulation and Giant impact simulation. All codes show very good parallel efficiency and scalability on K computer and XC30. FDPS lets the researchers concentrate on the implementation of physics and mathematical schemes, without wa...
FARO and KROTOS code simulation and analysis at JRC Ispra
Annunziato, A.; Yerkess, A.; Addabbo, C. [European Commission-Joint Research Centre, Inst. for Systems, Informatics and Safety, 21020 Ispra (Italy)
1998-01-01
The paper summarizes relevant results from the pre and post test calculations of fuel coolant interaction and quenching tests performed in the FARO and KROTOS test facilities. The main analytical tools adopted at JRC Ispra are the COMETA and the TEXAS codes. COMETA pre and post test calculations of FARO Test L-20 as well as an application of the code to KROTOS test facility are presented. The analysis provides the need to account for H{sub 2} generation models into the pre-mixing calculations. In addition salient results from the application of TEXAS to FARO and KROTOS tests are shown. (author)
Coupling methods for parallel running RELAPSim codes in nuclear power plant simulation
Li, Yankai; Lin, Meng, E-mail: linmeng@sjtu.edu.cn; Yang, Yanhua
2016-02-15
When the plant is modeled detailedly for high precision, it is hard to achieve real-time calculation for one single RELAP5 in a large-scale simulation. To improve the speed and ensure the precision of simulation at the same time, coupling methods for parallel running RELAPSim codes were proposed in this study. Explicit coupling method via coupling boundaries was realized based on a data-exchange and procedure-control environment. Compromise of synchronization frequency was well considered to improve the precision of simulation and guarantee the real-time simulation at the same time. The coupling methods were assessed using both single-phase flow models and two-phase flow models and good agreements were obtained between the splitting–coupling models and the integrated model. The mitigation of SGTR was performed as an integral application of the coupling models. A large-scope NPP simulator was developed adopting six splitting–coupling models of RELAPSim and other simulation codes. The coupling models could improve the speed of simulation significantly and make it possible for real-time calculation. In this paper, the coupling of the models in the engineering simulator is taken as an example to expound the coupling methods, i.e., coupling between parallel running RELAPSim codes, and coupling between RELAPSim code and other types of simulation codes. However, the coupling methods are also referable in other simulator, for example, a simulator employing ATHLETE instead of RELAP5, other logic code instead of SIMULINK. It is believed the coupling method is commonly used for NPP simulator regardless of the specific codes chosen in this paper.
Dipole Alignment in Rotating MHD Turbulence
Shebalin, John V.; Fu, Terry; Morin, Lee
2012-01-01
We present numerical results from long-term CPU and GPU simulations of rotating, homogeneous, magnetohydrodynamic (MHD) turbulence, and discuss their connection to the spherically bounded case. We compare our numerical results with a statistical theory of geodynamo action that has evolved from the absolute equilibrium ensemble theory of ideal MHD turbulence, which is based on the ideal MHD invariants are energy, cross helicity and magnetic helicity. However, for rotating MHD turbulence, the cross helicity is no longer an exact invariant, although rms cross helicity becomes quasistationary during an ideal MHD simulation. This and the anisotropy imposed by rotation suggests an ansatz in which an effective, nonzero value of cross helicity is assigned to axisymmetric modes and zero cross helicity to non-axisymmetric modes. This hybrid statistics predicts a large-scale quasistationary magnetic field due to broken ergodicity , as well as dipole vector alignment with the rotation axis, both of which are observed numerically. We find that only a relatively small value of effective cross helicity leads to the prediction of a dipole moment vector that is closely aligned (less than 10 degrees) with the rotation axis. We also discuss the effect of initial conditions, dissipation and grid size on the numerical simulations and statistical theory.
Simulation of LT Code in MATLAB%LT码的MATLAB仿真
陈国泰; 郑海峰; 陈国钦; 潘美莺; 廖延初
2011-01-01
After introducing the coding and decoding procession of LT code,a class of fountain code,the simulation program in MATLAB is presented and explained.With the simulation results based on three types of degree distributions for LT code,LT code and Raptor code are compared.%介绍了喷泉码中LT码的编码译码过程,提供了详细的MATLAB仿真代码和说明.通过对三种不同度分布的LT码进行性能仿真,并对仿真结果进行了分析,同时也对LT码和Raptor码进行了适当的比较.
A code to simulate nuclear reactor inventories and associated gamma-ray spectra.
Cresswell, A J; Allyson, J D; Sanderson, D C
2001-01-01
A computer code has been developed to simulate the gamma-ray spectra that would be measured by airborne gamma spectrometry (AGS) systems from sources containing short-lived fission products. The code uses simple numerical methods to simulate the production and decay of fission products and generates spectra for sodium iodide (NaI) detectors using Monte Carlo codes. A new Monte Carlo code using a virtual array of detectors to reduce simulation times for airborne geometries is described. Spectra generated for a short irradiation and laboratory geometry have been compared with an experimental data set. The agreement is good. Spectra have also been generated for airborne geometries and longer irradiation periods. The application of this code to generate AGS spectra for accident scenarios and their uses in the development and evaluation of spectral analysis methods for such situations are discussed.
GYSELA, a full-f global gyrokinetic Semi-Lagrangian code for ITG turbulence simulations
Grandgirard, V.; Sarazin, Y.; Garbet, X.; Dif-Pradalier, G.; Ghendrih, Ph.; Crouseilles, N.; Latu, G.; Sonnendrücker, E.; Besse, N.; Bertrand, P.
2006-11-01
This work addresses non-linear global gyrokinetic simulations of ion temperature gradient (ITG) driven turbulence with the GYSELA code. The particularity of GYSELA code is to use a fixed grid with a Semi-Lagrangian (SL) scheme and this for the entire distribution function. The 4D non-linear drift-kinetic version of the code already showns the interest of such a SL method which exhibits good properties of energy conservation in non-linear regime as well as an accurate description of fine spatial scales. The code has been upgrated to run 5D simulations of toroidal ITG turbulence. Linear benchmarks and non-linear first results prove that semi-lagrangian codes can be a credible alternative for gyrokinetic simulations.
Creating Synthetic Coronal Observational Data From MHD Models: The Forward Technique
Rachmeler, Laurel A.; Gibson, Sarah E.; Dove, James; Kucera, Therese Ann
2010-01-01
We present a generalized forward code for creating simulated corona) observables off the limb from numerical and analytical MHD models. This generalized forward model is capable of creating emission maps in various wavelengths for instruments such as SXT, EIT, EIS, and coronagraphs, as well as spectropolari metric images and line profiles. The inputs to our code can be analytic models (of which four come with the code) or 2.5D and 3D numerical datacubes. We present some examples of the observable data created with our code as well as its functional capabilities. This code is currently available for beta-testing (contact authors), with the ultimate goal of release as a SolarSoft package
MHD control in burning plasmas MHD control in burning plasmas
Donné, Tony; Liang, Yunfeng
2012-07-01
in the field of burn control is to find the proper balance between desired and detrimental effects of the various MHD modes and to develop the methods and tools for active feedback control of MHD modes in burning plasmas. Therefore, it is necessary to understand the dynamics of the system, in this case the mutual interactions between the fast alpha particles and the MHD instabilities. Since burning plasmas do not yet exist, the relevant experimental work until ITER comes into full operation needs to be largely based on alpha-particle simulation experiments in which the alpha particles are accelerated to high energies by means of special heating techniques. The precise conditions of a burning plasma can be only partly mimicked in present tokamaks. Hence, also a detailed computational modelling effort is needed, in order to understand the impact of findings in present machines for those of the future. In 2011 two dedicated workshops were devoted to MHD control. Firstly, there was a workshop on Control of Burning Plasmas that took place from 21-25 March 2011 at the Lorentz Centre in Leiden, The Netherlands. Secondly, the 480th Wilhelm and Else Heraeus Seminar that took place from 16-18 June in Bad Honnef, Germany was devoted to Active Control of Instabilities in Hot Plasmas. This special issue presents a collection of papers that have been presented at the two workshops, along with a few papers that are the result of an open call to contribute to this special issue.
OPR1000 Control Rod Drop Accident Simulation using the SPACE Code
Yang, Chang Keun; Ha, Sang Jun; Moon, Chan Kook [Korea Hydro and Nuclear Power, Daejeon (Korea, Republic of)
2012-05-15
The Korea nuclear industry has developed a best estimated two-phase three-filed thermal-hydraulic analysis code, SPACE (Safety and Performance Analysis Code for Nuclear Power Plants), for safety analysis and design of a PWR (Pressurized Water Reactor). As the first phase, the demo version of the SPACE code was released in March 2010. The code has been verified and improved according to the Validation and Verification (V and V) matrix prepared for the SPACE code as the second phase of the development. In this study, a Control Rod Drop accident has been simulated using the SPACE code as one aspect of the V and V work. The results from this test were compared with tests of the RETRAN and CESEC codes
Metropol, a computer code for the simulation of transport of contaminants with groundwater
Sauter FJ; Hassanizadeh SM; Leijnse A; Glasbergen P; Slot AFM
1990-01-01
In this report a description is given of the computer code METROPOL. This code simulates the three dimensional flow of groundwater with varying density and the simultaneous transport of contaminants in low concentration and is based on the finite element method. The basic equations for groundwater
Physical Model Development and Benchmarking for MHD Flows in Blanket Design
Ramakanth Munipalli; P.-Y.Huang; C.Chandler; C.Rowell; M.-J.Ni; N.Morley; S.Smolentsev; M.Abdou
2008-06-05
An advanced simulation environment to model incompressible MHD flows relevant to blanket conditions in fusion reactors has been developed at HyPerComp in research collaboration with TEXCEL. The goals of this phase-II project are two-fold: The first is the incorporation of crucial physical phenomena such as induced magnetic field modeling, and extending the capabilities beyond fluid flow prediction to model heat transfer with natural convection and mass transfer including tritium transport and permeation. The second is the design of a sequence of benchmark tests to establish code competence for several classes of physical phenomena in isolation as well as in select (termed here as “canonical”,) combinations. No previous attempts to develop such a comprehensive MHD modeling capability exist in the literature, and this study represents essentially uncharted territory. During the course of this Phase-II project, a significant breakthrough was achieved in modeling liquid metal flows at high Hartmann numbers. We developed a unique mathematical technique to accurately compute the fluid flow in complex geometries at extremely high Hartmann numbers (10,000 and greater), thus extending the state of the art of liquid metal MHD modeling relevant to fusion reactors at the present time. These developments have been published in noted international journals. A sequence of theoretical and experimental results was used to verify and validate the results obtained. The code was applied to a complete DCLL module simulation study with promising results.
Duan, Zhe
2015-01-01
We report a study of spin dynamics based on simulations with the Polymorphic Tracking Code (PTC), exploring the dependence of the static polarization limit on various beam parameters and lattice settings for a practical RHIC lattice.
Medium-rate speech coding simulator for mobile satellite systems
Copperi, Maurizio; Perosino, F.; Rusina, F.; Albertengo, G.; Biglieri, E.
1986-01-01
Channel modeling and error protection schemes for speech coding are described. A residual excited linear predictive (RELP) coder for bit rates 4.8, 7.2, and 9.6 kbit/sec is outlined. The coder at 9.6 kbit/sec incorporates a number of channel error protection techniques, such as bit interleaving, error correction codes, and parameter repetition. Results of formal subjective experiments (DRT and DAM tests) under various channel conditions, reveal that the proposed coder outperforms conventional LPC-10 vocoders by 2 subjective categories, thus confirming the suitability of the RELP coder at 9.6 kbit/sec for good quality speech transmission in mobile satellite systems.
ICOOL: A SIMULATION CODE FOR IONIZATION COOLING OF MUON BEAMS.
FERNOW,R.C.
1999-03-25
Current ideas [1,2] for designing a high luminosity muon collider require significant cooling of the phase space of the muon beams. The only known method that can cool the beams in a time comparable to the muon lifetime is ionization cooling [3,4]. This method requires directing the particles in the beam at a large angle through a low Z absorber material in a strong focusing magnetic channel and then restoring the longitudinal momentum with an rf cavity. We have developed a new 3-D tracking code ICOOL for examining possible configurations for muon cooling. A cooling system is described in terms of a series of longitudinal regions with associated material and field properties. The tracking takes place in a coordinate system that follows a reference orbit through the system. The code takes into account decays and interactions of {approx}50-500 MeV/c muons in matter. Material geometry regions include cylinders and wedges. A number of analytic models are provided for describing the field configurations. Simple diagnostics are built into the code, including calculation of emittances and correlations, longitudinal traces, histograms and scatter plots. A number of auxiliary files can be generated for post-processing analysis by the user.
Cordero Garcia, S.; Peco Espinosa, J.
2010-07-01
The fire simulation and analytical validation procedures have been gaining importance in the context of safety analysis and probabilistic deterministic Fire at Nuclear Power Plants. Meanwhile, the fire simulation codes have been accepted as valuable tools for risk analysis in fire protection. To evaluate the quality and predictability of the codes used in fire protection, they are validated with different experiments. This work is performed to find the dependency of the FDS output parameters against a certain input.
Benchmarking and scaling studies of pseudospectral code Tarang for turbulence simulations
Mahendra K Verma; Anando Chatterjee; K Sandeep Reddy; Rakesh K Yadav; Supriyo Paul; Mani Chandra; Ravi Samtaney
2013-10-01
Tarang is a general-purpose pseudospectral parallel code for simulating flows involving fluids, magnetohydrodynamics, and Rayleigh–Bénard convection in turbulence and instability regimes. In this paper we present code validation and benchmarking results of Tarang. We performed our simulations on 10243, 20483, and 40963 grids using the HPC system of IIT Kanpur and Shaheen of KAUST. We observe good `weak' and `strong' scaling for Tarang on these systems.
Rota, Christopher T; Wolf, Alexander J; Renken, Rochelle B; Gitzen, Robert A; Fantz, Debby K; Montgomery, Robert A; Olson, Matthew G; Vangilder, Larry D; Millspaugh, Joshua J
2016-12-01
We present predictor variables and R and Stan code for simulating and analyzing counts of Missouri Ozark herpetofauna in response to three forest management strategies. Our code performs four primary purposes: import predictor variables from spreadsheets; simulate synthetic response variables based on imported predictor variables and user-supplied values for data-generating parameters; format synthetic data for export to Stan; and analyze synthetic data.
Christopher T. Rota
2016-12-01
Full Text Available We present predictor variables and R and Stan code for simulating and analyzing counts of Missouri Ozark herpetofauna in response to three forest management strategies. Our code performs four primary purposes: import predictor variables from spreadsheets; simulate synthetic response variables based on imported predictor variables and user-supplied values for data-generating parameters; format synthetic data for export to Stan; and analyze synthetic data.
Benchmarking and scaling studies of pseudospectral code Tarang for turbulence simulations
VERMA, MAHENDRA K
2013-09-21
Tarang is a general-purpose pseudospectral parallel code for simulating flows involving fluids, magnetohydrodynamics, and Rayleigh–Bénard convection in turbulence and instability regimes. In this paper we present code validation and benchmarking results of Tarang. We performed our simulations on 10243, 20483, and 40963 grids using the HPC system of IIT Kanpur and Shaheen of KAUST. We observe good ‘weak’ and ‘strong’ scaling for Tarang on these systems.
Cardoso, J. F.; Delabrouille, J.; Ganga, K.
2015-01-01
with the local spatial coherence of the polarization angle. These observations are compared to polarized emission maps computed in simulations of anisotropic magnetohydrodynamical turbulence in which we assume a uniform intrinsic polarization fraction of the dust grains. We find that an estimate...
ARC Code TI: Mission Simulation ToolKit (MST)
National Aeronautics and Space Administration — The MST is a simulation framework, supporting the development of autonomy technology for planetary exploration vehicles. The MST provides a software test bed which...
A Multi-Code Analysis Toolkit for Astrophysical Simulation Data
Turk, Matthew J.; Smith., Britton D.; Oishi, Jeffrey S.; Skory, Stephen; Skillman, Samuel W.; Abel, Tom; Norman, Michael L.
2010-01-01
The analysis of complex multiphysics astrophysical simulations presents a unique and rapidly growing set of challenges: reproducibility, parallelization, and vast increases in data size and complexity chief among them. In order to meet these challenges, and in order to open up new avenues for collaboration between users of multiple simulation platforms, we present yt (available at http://yt.enzotools.org/), an open source, community-developed astrophysical analysis and visualization toolkit. ...
Schnack, Dalton D.
In this lecture we will examine some simple examples of MHD equilibrium configurations. These will all be in cylindrical geometry. They form the basis for more complicated equilibrium states in toroidal geometry.
Development of MCNPX-ESUT computer code for simulation of neutron/gamma pulse height distribution
Abolfazl Hosseini, Seyed; Vosoughi, Naser; Zangian, Mehdi
2015-05-01
In this paper, the development of the MCNPX-ESUT (MCNPX-Energy Engineering of Sharif University of Technology) computer code for simulation of neutron/gamma pulse height distribution is reported. Since liquid organic scintillators like NE-213 are well suited and routinely used for spectrometry in mixed neutron/gamma fields, this type of detectors is selected for simulation in the present study. The proposed algorithm for simulation includes four main steps. The first step is the modeling of the neutron/gamma particle transport and their interactions with the materials in the environment and detector volume. In the second step, the number of scintillation photons due to charged particles such as electrons, alphas, protons and carbon nuclei in the scintillator material is calculated. In the third step, the transport of scintillation photons in the scintillator and lightguide is simulated. Finally, the resolution corresponding to the experiment is considered in the last step of the simulation. Unlike the similar computer codes like SCINFUL, NRESP7 and PHRESP, the developed computer code is applicable to both neutron and gamma sources. Hence, the discrimination of neutron and gamma in the mixed fields may be performed using the MCNPX-ESUT computer code. The main feature of MCNPX-ESUT computer code is that the neutron/gamma pulse height simulation may be performed without needing any sort of post processing. In the present study, the pulse height distributions due to a monoenergetic neutron/gamma source in NE-213 detector using MCNPX-ESUT computer code is simulated. The simulated neutron pulse height distributions are validated through comparing with experimental data (Gohil et al. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 664 (2012) 304-309.) and the results obtained from similar computer codes like SCINFUL, NRESP7 and Geant4. The simulated gamma pulse height distribution for a 137Cs
The FLUKA Code: An Accurate Simulation Tool for Particle Therapy.
Battistoni, Giuseppe; Bauer, Julia; Boehlen, Till T; Cerutti, Francesco; Chin, Mary P W; Dos Santos Augusto, Ricardo; Ferrari, Alfredo; Ortega, Pablo G; Kozłowska, Wioletta; Magro, Giuseppe; Mairani, Andrea; Parodi, Katia; Sala, Paola R; Schoofs, Philippe; Tessonnier, Thomas; Vlachoudis, Vasilis
2016-01-01
Monte Carlo (MC) codes are increasingly spreading in the hadrontherapy community due to their detailed description of radiation transport and interaction with matter. The suitability of a MC code for application to hadrontherapy demands accurate and reliable physical models capable of handling all components of the expected radiation field. This becomes extremely important for correctly performing not only physical but also biologically based dose calculations, especially in cases where ions heavier than protons are involved. In addition, accurate prediction of emerging secondary radiation is of utmost importance in innovative areas of research aiming at in vivo treatment verification. This contribution will address the recent developments of the FLUKA MC code and its practical applications in this field. Refinements of the FLUKA nuclear models in the therapeutic energy interval lead to an improved description of the mixed radiation field as shown in the presented benchmarks against experimental data with both (4)He and (12)C ion beams. Accurate description of ionization energy losses and of particle scattering and interactions lead to the excellent agreement of calculated depth-dose profiles with those measured at leading European hadron therapy centers, both with proton and ion beams. In order to support the application of FLUKA in hospital-based environments, Flair, the FLUKA graphical interface, has been enhanced with the capability of translating CT DICOM images into voxel-based computational phantoms in a fast and well-structured way. The interface is capable of importing also radiotherapy treatment data described in DICOM RT standard. In addition, the interface is equipped with an intuitive PET scanner geometry generator and automatic recording of coincidence events. Clinically, similar cases will be presented both in terms of absorbed dose and biological dose calculations describing the various available features.
Large Eddy Simulation of Flow in Turbine Cascades Using LESTool and UNCLE Codes
Huang, P. G.
2004-01-01
During the period December 23,1997 and December August 31,2004, we accomplished the development of 2 CFD codes for DNS/LES/RANS simulation of turbine cascade flows, namely LESTool and UNCLE. LESTool is a structured code making use of 5th order upwind differencing scheme and UNCLE is a second-order-accuracy unstructured code. LESTool has both Dynamic SGS and Spalart's DES models and UNCLE makes use of URANS and DES models. The current report provides a description of methodologies used in the codes.
Large Eddy Simulation of Flow in Turbine Cascades Using LEST and UNCLE Codes
Ashpis, David (Technical Monitor); Huang, P. G.
2004-01-01
During the period December 23, 1997 and December August 31, 2004, we accomplished the development of 2 CFD codes for DNS/LES/RANS simulation of turbine cascade flows, namely LESTool and UNCLE. LESTool is a structured code making use of 5th order upwind differencing scheme and UNCLE is a second-order-accuracy unstructured code. LESTool has both Dynamic SGS and Sparlart's DES models and UNCLE makes use of URANS and DES models. The current report provides a description of methodologies used in the codes.
Pruess, Karsten
2003-08-08
Numerical simulation has become a widely practiced andaccepted technique for studying flow and transport processes in thevadose zone and other subsurface flow systems. This article discusses asuite of codes, developed primarily at Lawrence Berkeley NationalLaboratory (LBNL), with the capability to model multiphase flows withphase change. We summarize history and goals in the development of theTOUGH codes, and present the governing equations for multiphase,multicomponent flow. Special emphasis is given to space discretization bymeans of integral finite differences (IFD). Issues of code implementationand architecture are addressed, as well as code applications,maintenance, and future developments.
E. Adamson
2012-02-01
Full Text Available We present results from mesoscale simulations of the magnetospheric cusp region for both strongly northward and strongly southward interplanetary magnetic field (IMF. Simulation results indicate an extended region of depressed magnetic field and strongly enhanced plasma β which exhibits a strong dependence on IMF orientation. These structures correspond to the Cusp Diamagnetic Cavities (CDC's. The typical features of these CDC's are generally well reproduced by the simulation. The inner boundaries between the CDC and the magnetosphere are gradual transitions which form a clear funnel shape, regardless of IMF orientation. The outer CDC/magnetosheath boundary exhibits a clear indentation in both the x-z and y-z planes for southward IMF, while it is only indented in the x-z plane for northward, with a convex geometry in the y-z plane. The outer boundary represents an Alfvénic transition, mostly consistent with a slow-shock, indicating that reconnection plays an important role in structuring the high-altitude cusp region.
TreePM: A Code for Cosmological N-Body Simulations
J. S. Bagla
2002-09-01
We describe the TreePM method for carrying out large N-Body simulations to study formation and evolution of the large scale structure in the Universe. This method is a combination of Barnes and Hut tree code and Particle-Mesh code. It combines the automatic inclusion of periodic boundary conditions of PM simulations with the high resolution of tree codes. This is done by splitting the gravitational force into a short range and a long range component. We describe the splitting of force between these two parts.We outline the key differences between TreePM and some other N-Body methods.
Simulation of loss of feedwater transient of MASLWR test facility by MARS-KS code
Park, Juyeop [Korea Institute of Nuclear Safety, Daejeon (Korea, Republic of)
2013-05-15
MASLWR test facility is a mock-up of a passive integral type reactor equipped with helical coil steam generator. Since SMART reactor which is being current developed domestically also adopts helical coil steam generator, KINS has joined this ICSP to evaluate performance of domestic regulatory audit thermal-hydraulic code (MARS-KS code) in various respects including wall-to-fluid heat transfer model modification implemented in the code by independent international experiment database. In the ICSP, two types of transient experiments have been focused and they are loss of feedwater transient with subsequent ADS operation and long term cooling (SP-2) and normal operating conditions at different power levels (SP-3). In the present study, KINS simulation results by the MARS-KS code (KS-002 version) for the SP-2 experiment are presented in detail and conclusions on MARS-KS code performance drawn through this simulation is described. Performance of the MARS-KS code is evaluated through the simulation of the loss of feedwater transient of the MASLWR test facility. Steady state run shows helical coil specific heat transfer models implemented in the code is reasonable. However, through the transient run, it is also found that three-dimensional effect within the HPC and axial conduction effect through the HTP are not well reproduced by the code.
Applications of the lahet simulation code to relativistic heavy ion detectors
Waters, L.; Gavron, A. [Los Alamos National Lab., NM (United States)
1991-12-31
The Los Alamos High Energy Transport (LAHET) simulation code has been applied to test beam data from the lead/scintillator Participant Calorimeter of BNL AGS experiment E814. The LAHET code treats hadronic interactions with the LANL version of the Oak Ridge code HETC. LAHET has now been expanded to handle hadrons with kinetic energies greater than 5 GeV with the FLUKA code, while HETC is used exclusively below 2.0 GeV. FLUKA is phased in linearly between 2.0 and 5.0 GeV. Transport of electrons and photons is done with EGS4, and an interface to the Los Alamos HMCNP3B library based code is provided to analyze neutrons with kinetic energies less than 20 MeV. Excellent agreement is found between the test data and simulation, and results for 2.46 GeV/c protons and pions are illustrated in this article.
Applications of the lahet simulation code to relativistic heavy ion detectors
Waters, L.; Gavron, A. [Los Alamos National Lab., NM (United States)
1991-12-31
The Los Alamos High Energy Transport (LAHET) simulation code has been applied to test beam data from the lead/scintillator Participant Calorimeter of BNL AGS experiment E814. The LAHET code treats hadronic interactions with the LANL version of the Oak Ridge code HETC. LAHET has now been expanded to handle hadrons with kinetic energies greater than 5 GeV with the FLUKA code, while HETC is used exclusively below 2.0 GeV. FLUKA is phased in linearly between 2.0 and 5.0 GeV. Transport of electrons and photons is done with EGS4, and an interface to the Los Alamos HMCNP3B library based code is provided to analyze neutrons with kinetic energies less than 20 MeV. Excellent agreement is found between the test data and simulation, and results for 2.46 GeV/c protons and pions are illustrated in this article.
Simulation and Optimization of VHDL code for FPGA-Based Design using Simulink
Naresh Grover
2014-06-01
Full Text Available Simulations and prototyping have been a very important part of the electronics industry since a very long time. In recent years, FPGA's have become increasingly important and have found their way into all kind of digital system design This paper presents a novel, easy and efficient approach of implementation and verification of VHDL code using Simulink and then to regenerate the optimized VHDL code again using Simulink. The VHDL code written for the complicated digital design of 32-bit floating point arithmetic unit has been synthesized on Xilinx, verified and simulated on Simulink. The same VHDL code in Modelsim was optimized using this approach and the optimized code so generated by Simulinkhas also been synthesized to compare the results. Power dissipations for both synthesized designs using Xilinx Power Estimator were also extracted for comparison.
Evaluation of the Aleph PIC Code on Benchmark Simulations
Boerner, Jeremiah; Pacheco, Jose; Grillet, Anne
2016-09-01
Aleph is a massively parallel, 3D unstructured mesh, Particle-in-Cell (PIC) code, developed to model low temperature plasma applications. In order to verify and validate performance, Aleph is benchmarked against a series of canonical problems to demonstrate statistical indistinguishability in the results. Here, a series of four problems is studied: Couette flows over a range of Knudsen number, sheath formation in an undriven plasma, the two-stream instability, and a capacitive discharge. These problems respectively exercise collisional processes, particle motion in electrostatic fields, electrostatic field solves coupled to particle motion, and a fully coupled reacting plasma. Favorable comparison with accepted results establishes confidence in Aleph's capability and accuracy as a general purpose PIC code. Finally, Aleph is used to investigate the sensitivity of a triggered vacuum gap switch to the particle injection conditions associated with arc breakdown at the trigger. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.
Suriano, Scott S.; Li, Zhi-Yun; Krasnopolsky, Ruben; Shang, Hsien
2017-07-01
Rings and gaps are being observed in an increasing number of discs around young stellar objects. We illustrate the formation of such radial structures through idealized, 2D (axisymmetric) resistive magnetohydrodynamic simulations of coupled disc-wind systems threaded by a relatively weak poloidal magnetic field (plasma-β ˜ 103). We find two distinct modes of accretion depending on the resistivity and field strength. A small resistivity or high field strength promotes the development of rapidly infalling 'avalanche accretion streams' in a vertically extended disc envelope that dominates the dynamics of the system, especially the mass accretion. The streams are suppressed in simulations with larger resistivities or lower field strengths, where most of the accretion instead occurs through a laminar disc. In these simulations, the disc accretion is driven mainly by a slow wind that is typically accelerated by the pressure gradient from a predominantly toroidal magnetic field. Both wind-dominated ISM: jets and outflows and stream-dominated modes of accretion create prominent features in the surface density distribution of the disc, including rings and gaps, with a strong spatial variation of the magnetic flux relative to the mass. Regions with low mass-to-flux ratios accrete quickly, leading to the development of gaps, whereas regions with higher mass-to-flux ratios tend to accrete more slowly, allowing matter to accumulate and form dense rings. In some cases, avalanche accretion streams are observed to produce dense rings directly through continuous feeding. We discuss the implications of ring and gap formation driven by winds and streams on grain growth and planet formation.
Parallelization of a beam dynamics code and first large scale radio frequency quadrupole simulations
J. Xu
2007-01-01
Full Text Available The design and operation support of hadron (proton and heavy-ion linear accelerators require substantial use of beam dynamics simulation tools. The beam dynamics code TRACK has been originally developed at Argonne National Laboratory (ANL to fulfill the special requirements of the rare isotope accelerator (RIA accelerator systems. From the beginning, the code has been developed to make it useful in the three stages of a linear accelerator project, namely, the design, commissioning, and operation of the machine. To realize this concept, the code has unique features such as end-to-end simulations from the ion source to the final beam destination and automatic procedures for tuning of a multiple charge state heavy-ion beam. The TRACK code has become a general beam dynamics code for hadron linacs and has found wide applications worldwide. Until recently, the code has remained serial except for a simple parallelization used for the simulation of multiple seeds to study the machine errors. To speed up computation, the TRACK Poisson solver has been parallelized. This paper discusses different parallel models for solving the Poisson equation with the primary goal to extend the scalability of the code onto 1024 and more processors of the new generation of supercomputers known as BlueGene (BG/L. Domain decomposition techniques have been adapted and incorporated into the parallel version of the TRACK code. To demonstrate the new capabilities of the parallelized TRACK code, the dynamics of a 45 mA proton beam represented by 10^{8} particles has been simulated through the 325 MHz radio frequency quadrupole and initial accelerator section of the proposed FNAL proton driver. The results show the benefits and advantages of large-scale parallel computing in beam dynamics simulations.
The Karlsruhe extensive air shower simulation code CORSIKA.
Capdevielle, J. N.; Grieder, P.; Knapp, J.; Gabriel, P.; Gils, H. J.; Heck, D.; Mayer, H. J.; Oehlschläger, J.; Rebel, H.; Schatz, G.; Thouw, T.
1992-11-01
CORSIKA is a detailed simulation program for extensive air showers initiated by high energy cosmic particles. Primary protons and nuclei up to iron can be treated as well as photons. The reaction model for the hadronic interactions is based on the Dual Parton Model and relies on experimental data wherever possible. For electromagnetic interactions the shower program EGS4 may be used.
A Novel High-Order, Entropy Stable, 3D AMR MHD Solver with Guaranteed Positive Pressure
Derigs, Dominik; Gassner, Gregor J; Walch, Stefanie
2016-01-01
We describe a high-order numerical magnetohydrodynamics (MHD) solver built upon a novel non-linear entropy stable numerical flux function that supports eight travelling wave solutions. By construction the solver conserves mass, momentum, and energy and is entropy stable. The method is designed to treat the divergence-free constraint on the magnetic field in a similar fashion to a hyperbolic divergence cleaning technique. The solver described herein is especially well-suited for flows involving strong discontinuities. Furthermore, we present a new formulation to guarantee positivity of the pressure. We present the underlying theory and implementation of the new solver into the multi-physics, multi-scale adaptive mesh refinement (AMR) simulation code $\\texttt{FLASH}$ (http://flash.uchicago.edu). The accuracy, robustness and computational efficiency is demonstrated with a number of tests, including comparisons to available MHD implementations in $\\texttt{FLASH}$.
An Advanced simulation Code for Modeling Inductive Output Tubes
Thuc Bui; R. Lawrence Ives
2012-04-27
During the Phase I program, CCR completed several major building blocks for a 3D large signal, inductive output tube (IOT) code using modern computer language and programming techniques. These included a 3D, Helmholtz, time-harmonic, field solver with a fully functional graphical user interface (GUI), automeshing and adaptivity. Other building blocks included the improved electrostatic Poisson solver with temporal boundary conditions to provide temporal fields for the time-stepping particle pusher as well as the self electric field caused by time-varying space charge. The magnetostatic field solver was also updated to solve for the self magnetic field caused by time changing current density in the output cavity gap. The goal function to optimize an IOT cavity was also formulated, and the optimization methodologies were investigated.
Code modernization and modularization of APEX and SWAT watershed simulation models
SWAT (Soil and Water Assessment Tool) and APEX (Agricultural Policy / Environmental eXtender) are respectively large and small watershed simulation models derived from EPIC Environmental Policy Integrated Climate), a field-scale agroecology simulation model. All three models are coded in FORTRAN an...
XIONG Ming; PENG Zhong; HU You-Qiu; ZHENG Hui-Nan
2009-01-01
Three-dimensional global magnetohydrodynamic simulations of the solar wind magnetosphere-ionosphere system are carried out to explore the dependence of the magnetospheric reconnection voltage, the ionospheric transpolar potential, and the field aligned currents (FACs) on the solar wind driver and ionosphere load for the cases with pure southward interplanetary magnetic field (IMP). It is shown that the reconnection voltage and the transpolar potential increase monotonically with decreasing Pedersen conductance (∑p ), increasing southward IMF strength (Bs) and solar wind speed (vsw). Moreover, both regions 1 and 2 FACs increase when Bs and vsw increase, whereas the two currents behave differently in response to ∑p. As ∑p increases, the region 1 FAC increases monotonically, but region 2 FAC shows a non-monotonic response to the increase of ∑p : it first increases in the range of (0,5) Siemens and then decreases for ∑p 5 Siemens.
Criscuoli, Serena
2013-01-01
Recent observations have shown that the photometric and dynamic properties of granulation and of small-scale magnetic features depend on the amount of magnetic flux of the region they are embedded in. We analyze results from numerical Hydro and Magneto Hydrodynamic simulations characterized by different amount of average magnetic flux and find qualitatively the same differences as those reported from observations. We show that these different physical properties result from the inhibition of convection induced by the presence of the magnetic field, which changes the temperature stratification of both quiet and magnetic regions. Our results are relevant for solar irradiance variations studies, as such differences are still not properly taken into account in irradiance reconstruction models.
Fuerst, Steven V.; /KIPAC, Menlo Park; Mizuno, Yosuke; /USRA, Huntsville; Nishikawa, Ken-Ichi; /USRA, Huntsville /Alabama U., Huntsville; Wu, Kinwah; /Mullard Space Sci.
2007-01-05
We calculate the emission from relativistic flows in black hole systems using a fully general relativistic radiative transfer formulation, with flow structures obtained by general relativistic magneto-hydrodynamic simulations. We consider thermal free-free emission and thermal synchrotron emission. Bright filament-like features protrude (visually) from the accretion disk surface, which are enhancements of synchrotron emission where the magnetic field roughly aligns with the line-of-sight in the co-moving frame. The features move back and forth as the accretion flow evolves, but their visibility and morphology are robust. We propose that variations and drifts of the features produce certain X-ray quasi-periodic oscillations (QPOs) observed in black-hole X-ray binaries.
Simulation of bundle test Quench-12 with integral code MELCOR
Duspiva, J. [Nuclear Research Inst., Rez plc (Czech Republic)
2011-07-01
The past NRI analyses cover the Quench-01, Quench-03 and Quench-06 with version MELCOR 1.8.5 (including reflood model), and Quench-01 and Quench-11 tests with the latest version MELCOR 1.8.6. The Quench-12 test is specific, because it has different bundle configuration related to the VVER bundle configuration with hexagonal grid of pins and also used E110 cladding material. Specificity of Quench-12 test is also in the used material of fuel rod cladding - E110. The test specificities are a reason for the highest concern, because the VVER reactors are operated in the Czech Republic. The new input model was developed with the taking into account all experience from previous simulations of the Quench bundle tests. The recent version MELCOR 1.8.6 YU{sub 2}911 was used for the simulation with slightly modified ELHEAT package. Sensitivity studies on input parameters and oxidation kinetics were performed. (author)
3D Convection-pulsation Simulations with the HERACLES Code
Felix, S.; Audit, E.; Dintrans, B.
2015-10-01
We present 3D simulations of the coupling between surface convection and pulsations due to the κ-mechanism in classical Cepheids of the red edge of Hertzsprung-Russell diagram's instability strip. We show that 3D convection is less powerful than 2D convection and does not quench the radiative pulsations, leading to an efficient 3D κ-mechanism. Thus, the 3D instability strip is closer to the observed one than the 1D or 2D were.
Process monitoring and simulation code verification using interactive computer animation
Curtis, J.N.; Beelman, R.J.; Schwieder, D.H.; Stewart, H.D.
1984-05-23
At the Idaho National Engineering Laboratory (INEL), EG and G Idaho, Inc., has developed techniques by which schematics, created for and displayed at color graphics terminals, can be driven by actual or calculated data. These input data cause changes to occur within the displayed schematic. This research is presently being done to develop a prototype to be used in nuclear power plant control rooms. Work stations have already been developed to analyze data that are produced during actual and simulated nuclear reactor experiments.
Vrnak, Daniel R.; Stueber, Thomas J.; Le, Dzu K.
2012-01-01
This report presents a method for running a dynamic legacy inlet simulation in concert with another dynamic simulation that uses a graphical interface. The legacy code, NASA's LArge Perturbation INlet (LAPIN) model, was coded using the FORTRAN 77 (The Portland Group, Lake Oswego, OR) programming language to run in a command shell similar to other applications that used the Microsoft Disk Operating System (MS-DOS) (Microsoft Corporation, Redmond, WA). Simulink (MathWorks, Natick, MA) is a dynamic simulation that runs on a modern graphical operating system. The product of this work has both simulations, LAPIN and Simulink, running synchronously on the same computer with periodic data exchanges. Implementing the method described in this paper avoided extensive changes to the legacy code and preserved its basic operating procedure. This paper presents a novel method that promotes inter-task data communication between the synchronously running processes.
2D and 3D Core-Collapse Supernovae Simulation Results Obtained with the CHIMERA Code
Bruenn, S W; Hix, W R; Blondin, J M; Marronetti, P; Messer, O E B; Dirk, C J; Yoshida, S
2010-01-01
Much progress in realistic modeling of core-collapse supernovae has occurred recently through the availability of multi-teraflop machines and the increasing sophistication of supernova codes. These improvements are enabling simulations with enough realism that the explosion mechanism, long a mystery, may soon be delineated. We briefly describe the CHIMERA code, a supernova code we have developed to simulate core-collapse supernovae in 1, 2, and 3 spatial dimensions. We then describe the results of an ongoing suite of 2D simulations initiated from a 12, 15, 20, and 25 solar mass progenitor. These have all exhibited explosions and are currently in the expanding phase with the shock at between 5,000 and 20,000 km. We also briefly describe an ongoing simulation in 3 spatial dimensions initiated from the 15 solar mass progenitor.
2D and 3D core-collapse supernovae simulation results obtained with the CHIMERA code
Bruenn, S W; Marronetti, P; Dirk, C J [Physics Department, Florida Atlantic University, 777 W. Glades Road, Boca Raton, FL 33431-0991 (United States); Mezzacappa, A; Hix, W R [Physics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831-6354 (United States); Blondin, J M [Department of Physics, North Carolina State University, Raleigh, NC 27695-8202 (United States); Messer, O E B [Center for Computational Sciences, Oak Ridge National Laboratory, Oak Ridge, TN 37831-6354 (United States); Yoshida, S, E-mail: bruenn@fau.ed [Max-Planck-Institut fur Gravitationsphysik, Albert Einstein Institut, Golm (Germany)
2009-07-01
Much progress in realistic modeling of core-collapse supernovae has occurred recently through the availability of multi-teraflop machines and the increasing sophistication of supernova codes. These improvements are enabling simulations with enough realism that the explosion mechanism, long a mystery, may soon be delineated. We briefly describe the CHIMERA code, a supernova code we have developed to simulate core-collapse supernovae in 1, 2, and 3 spatial dimensions. We then describe the results of an ongoing suite of 2D simulations initiated from a 12, 15, 20, and 25 M{sub o-dot} progenitor. These have all exhibited explosions and are currently in the expanding phase with the shock at between 5,000 and 20,000 km. We also briefly describe an ongoing simulation in 3 spatial dimensions initiated from the 15 M{sub o-dot} progenitor.
MOCCA code for star cluster simulation: comparison with optical observations using COCOA
Askar, Abbas; Giersz, Mirek; Pych, Wojciech; Olech, Arkadiusz; Hypki, Arkadiusz
2016-02-01
We introduce and present preliminary results from COCOA (Cluster simulatiOn Comparison with ObservAtions) code for a star cluster after 12 Gyr of evolution simulated using the MOCCA code. The COCOA code is being developed to quickly compare results of numerical simulations of star clusters with observational data. We use COCOA to obtain parameters of the projected cluster model. For comparison, a FITS file of the projected cluster was provided to observers so that they could use their observational methods and techniques to obtain cluster parameters. The results show that the similarity of cluster parameters obtained through numerical simulations and observations depends significantly on the quality of observational data and photometric accuracy.
MOCCA Code for Star Cluster Simulation: Comparison with Optical Observations using COCOA
Askar, Abbas; Pych, Wojciech; Olech, Arkadiusz; Hypki, Arkadiusz
2015-01-01
We introduce and present preliminary results from COCOA (Cluster simulatiOn Comparison with ObservAtions) code for a star cluster after 12 Gyrs of evolution simulated using the MOCCA code. The COCOA code is being developed to quickly compare results of numerical simulations of star clusters with observational data. We use COCOA to obtain parameters of the projected cluster model. For comparison, a FITS file of the projected cluster was provided to observers so that they could use their observational methods and techniques to obtain cluster parameters. The results show that the similarity of cluster parameters obtained through numerical simulations and observations depends significantly on the quality of observational data and photometric accuracy.
Monteagudo Ángel
2011-02-01
Full Text Available Abstract Background As the canonical code is not universal, different theories about its origin and organization have appeared. The optimization or level of adaptation of the canonical genetic code was measured taking into account the harmful consequences resulting from point mutations leading to the replacement of one amino acid for another. There are two basic theories to measure the level of optimization: the statistical approach, which compares the canonical genetic code with many randomly generated alternative ones, and the engineering approach, which compares the canonical code with the best possible alternative. Results Here we used a genetic algorithm to search for better adapted hypothetical codes and as a method to guess the difficulty in finding such alternative codes, allowing to clearly situate the canonical code in the fitness landscape. This novel proposal of the use of evolutionary computing provides a new perspective in the open debate between the use of the statistical approach, which postulates that the genetic code conserves amino acid properties far better than expected from a random code, and the engineering approach, which tends to indicate that the canonical genetic code is still far from optimal. We used two models of hypothetical codes: one that reflects the known examples of codon reassignment and the model most used in the two approaches which reflects the current genetic code translation table. Although the standard code is far from a possible optimum considering both models, when the more realistic model of the codon reassignments was used, the evolutionary algorithm had more difficulty to overcome the efficiency of the canonical genetic code. Conclusions Simulated evolution clearly reveals that the canonical genetic code is far from optimal regarding its optimization. Nevertheless, the efficiency of the canonical code increases when mistranslations are taken into account with the two models, as indicated by the
Ricci, P.; Halpern, F. D.; Jolliet, S.; Loizu, J.; Mosetto, A.; Fasoli, A.; Furno, I.; Theiler, C.
2012-12-01
Based on the drift-reduced Braginskii equations, the Global Braginskii Solver, GBS, is able to model the scrape-off layer (SOL) plasma turbulence in terms of the interplay between the plasma outflow from the tokamak core, the turbulent transport, and the losses at the vessel. Model equations, the GBS numerical algorithm, and GBS simulation results are described. GBS has been first developed to model turbulence in basic plasma physics devices, such as linear and simple magnetized toroidal devices, which contain some of the main elements of SOL turbulence in a simplified setting. In this paper we summarize the findings obtained from the simulation carried out in these configurations and we report the first simulations of SOL turbulence. We also discuss the validation project that has been carried out together with the GBS development.
Li, Pak Shing; Klein, Richard I; McKee, Christopher F
2011-01-01
Performing a stable, long duration simulation of driven MHD turbulence with a high thermal Mach number and a strong initial magnetic field is a challenge to high-order Godunov ideal MHD schemes because of the difficulty in guaranteeing positivity of the density and pressure. We have implemented a robust combination of reconstruction schemes, Riemann solvers, limiters, and Constrained Transport EMF averaging schemes that can meet this challenge, and using this strategy, we have developed a new Adaptive Mesh Refinement (AMR) MHD module of the ORION2 code. We investigate the effects of AMR on several statistical properties of a turbulent ideal MHD system with a thermal Mach number of 10 and a plasma $\\beta_0$ of 0.1 as initial conditions; our code is shown to be stable for simulations with higher Mach numbers ($M_rms = 17.3$) and smaller plasma beta ($\\beta_0 = 0.0067$) as well. Our results show that the quality of the turbulence simulation is generally related to the volume-averaged refinement. Our AMR simulati...
Srna - Monte Carlo codes for proton transport simulation in combined and voxelized geometries
Ilić Radovan D.
2002-01-01
Full Text Available This paper describes new Monte Carlo codes for proton transport simulations in complex geometrical forms and in materials of different composition. The SRNA codes were developed for three dimensional (3D dose distribution calculation in proton therapy and dosimetry. The model of these codes is based on the theory of proton multiple scattering and a simple model of compound nucleus decay. The developed package consists of two codes: SRNA-2KG and SRNA-VOX. The first code simulates proton transport in combined geometry that can be described by planes and second order surfaces. The second one uses the voxelized geometry of material zones and is specifically adopted for the application of patient computer tomography data. Transition probabilities for both codes are given by the SRNADAT program. In this paper, we will present the models and algorithms of our programs, as well as the results of the numerical experiments we have carried out applying them, along with the results of proton transport simulation obtained through the PETRA and GEANT programs. The simulation of the proton beam characterization by means of the Multi-Layer Faraday Cup and spatial distribution of positron emitters obtained by our program indicate the imminent application of Monte Carlo techniques in clinical practice.
The Possibly Remnant Massive Outflow in G5.89-0.39: I - Observations and Initial MHD Simulations
Klaassen, P D; Ouyed, R; Plume, R; Von Benda-Beckmann, A M
2006-01-01
We have obtained maps of the large scale outflow associated with the UCHII regionG5.89-0.39 in CO and 13CO (J=3-2), SiO (J=8-7,J=5-4), SO2 (13(2,12)-13(1,13)) and H13CO+(J=4-3). From these maps we have been able to determine the mass (3.3 M_sun), momentum (96 M_sun km/s), energy (3.5x10^{46} erg), mechanical luminosity (141 L_sun), and mass loss rate (~1x10^{-3}M_sun/yr) in the large scale outflow. The observationally derived parameters were used toguide 3D magnetohydrodynamic models of the jet entrained outflow. Through the combination of observations and simulations, we suggest that the large scale outflowmay be inclined by approximately 45 deg to the line of sight, and that the jet entraining the observed molecular outflow may have been active for as little as 1000 years, half the kinematic age of the outflow.
Comparisons of the simulation results using different codes for ADS spallation target
Yu Hong Wei; Shen Qing Biao; Wan Jun Sheng; Zhao Zhi Xiang
2002-01-01
The calculations to the standard thick target were made by using different codes. The simulation of the thick Pb target with length of 60 cm, diameter of 20 cm bombarded with 800, 1000, 1500 and 2000 MeV energetic proton beam was carried out. The yields and the spectra of emitted neutron were studied. The spallation target was simulated by SNSP, SHIELD, DCM/CEM (Dubna Cascade Model /Cascade Evaporation Mode) and LAHET codes. The Simulation Results were compared with experiments. The comparisons show good agreement between the experiments and the SNSP simulated leakage neutron yield. The SHIELD simulated leakage neutron spectra are in good agreement with the LAHET and the DCM/CEM simulated leakage neutron spectra
The application of Geant4 simulation code for brachytherapy treatment
Agostinelli, S; Garelli, S; Paoli, G; Nieminen, P; Pia, M G
2000-01-01
Brachytherapy is a radiotherapeutic modality that makes use of radionuclides to deliver a high radiation dose to a well-defined volume while sparing surrounding healthy structures. At the National Institute for Cancer Research of Genova a High Dose Rate remote afterloading system provides Ir(192) endocavitary brachytherapy treatments. We studied the possibility to use the Geant4 Monte Carlo simulation toolkit in brachytherapy for calculation of complex physical parameters, not directly available by experiment al measurements, used in treatment planning dose deposition models.
Vencels, Juris; Delzanno, Gian Luca; Manzini, Gianmarco; Markidis, Stefano; Peng, Ivy Bo; Roytershteyn, Vadim
2016-05-01
We present the design and implementation of a spectral code, called SpectralPlasmaSolver (SPS), for the solution of the multi-dimensional Vlasov-Maxwell equations. The method is based on a Hermite-Fourier decomposition of the particle distribution function. The code is written in Fortran and uses the PETSc library for solving the non-linear equations and preconditioning and the FFTW library for the convolutions. SPS is parallelized for shared- memory machines using OpenMP. As a verification example, we discuss simulations of the two-dimensional Orszag-Tang vortex problem and successfully compare them against a fully kinetic Particle-In-Cell simulation. An assessment of the performance of the code is presented, showing a significant improvement in the code running-time achieved by preconditioning, while strong scaling tests show a factor of 10 speed-up using 16 threads.
Modification of PRETOR Code to Be Applied to Transport Simulation in Stellarators
Fontanet, J.; Castejon, F.; Dies, J.; Fontdecaba, J.; Alejaldre, C.
2001-07-01
The 1.5 D transport code PRETOR, that has been previously used to simulate tokamak plasmas, has been modified to perform transport analysis in stellarator geometry. The main modifications that have been introduced in the code are related with the magnetic equilibrium and with the modelling of energy and particle transport. Therefore, PRETOR- Stellarator version has been achieved and the code is suitable to perform simulations on stellarator plasmas. As an example, PRETOR- Stellarator has been used in the transport analysis of several Heliac Flexible TJ-II shots, and the results are compared with those obtained using PROCTR code. These results are also compared with the obtained using the tokamak version of PRETOR to show the importance of the introduced changes. (Author) 18 refs.
Comparative Design Studies for the BESSY FEL Program using the MEDUSA and GENESIS Simulation Codes
Freund, H
2005-01-01
The BESSY FEL is based on a seeded cascade of High Gain Harmonic Generation (HGHG) sections followed by an amplifier to produce coherent and stable short wavelength output. Here, we report on comparative design studies carried out using the MEDUSA [1], and GENESIS [2] simulation codes. These two codes have each been used to successfully predict a variety of FEL designs and have agreed well with a number of important experiments. In addition, they were included in a comparative study of FEL simulation [3] that reported substantial agreement between the codes for the specific configurations studied. However, these codes are based on different assumptions. GENESIS treats the particle dynamics using a wiggler-averaged orbit approximation, the transverse electromagnetic field is treated using a field solver, and harmonics are not included. MEDUSA does not use the wiggler-averaged orbit approximation to treat particle dynamics, the transverse fields are treated using a Gaussian modal superposition, and harmonics ar...
Plasma Shape and Current Control Simulation of HT-7U Tokamak
吴斌; 张澄
2003-01-01
This paper describes the discharge simulation of HT-7U tokamak plasma equilibriumand plasma current by solving MHD equations and surface average transport equations using anequilibrium evolution code. The simulated result shows the evolution of plasma parameter versustime .The simulated result can play an important role in the design of the plasma equilibrium andcontrol system of a tokamak.
On the Quantification of Incertitude in Astrophysical Simulation Codes
Hoffman, Melissa; Katz, Maximilian P.; Willcox, Donald E.; Ferson, Scott; Swesty, F. Douglas; Calder, Alan
2017-01-01
We present a pedagogical study of uncertainty quantification (UQ) due to epistemic uncertainties (incertitude) in astrophysical modeling using the stellar evolution software instrument MESA (Modules and Experiments for Stellar Astrophysics). We present a general methodology for UQ and examine the specific case of stars evolving from the main sequence to carbon/oxygen white dwarfs. Our study considers two epistemic variables: the wind parameters during the Red Giant and Asymptotic Giant branch phases of evolution. We choose uncertainty intervals for each variable, and use these as input to MESA simulations. Treating MESA as a "black box," we apply two UQ techniques, Cauchy deviates and Quadratic Response Surface Models, to obtain bounds for the final white dwarf masses. Our study is a proof of concept applicable to other computational problems to enable a more robust understanding of incertitude. This work was supported in part by the US Department of Energy under grant DE-FG02-87ER40317.
ANL/HTP: a computer code for the simulation of heat pipe operation
McLennan, G.A.
1983-11-01
ANL/HTP is a computer code for the simulation of heat pipe operation, to predict heat pipe performance and temperature distributions during steady state operation. Source and sink temperatures and heat transfer coefficients can be set as input boundary conditions, and varied for parametric studies. Five code options are included to calculate performance for fixed operating conditions, or to vary any one of the four boundary conditions to determine the heat pipe limited performance. The performance limits included are viscous, sonic, entrainment capillary, and boiling, using the best available theories to model these effects. The code has built-in models for a number of wick configurations - open grooves, screen-covered grooves, screen-wrap, and arteries, with provision for expansion. The current version of the code includes the thermophysical properties of sodium as the working fluid in an expandable subroutine. The code-calculated performance agrees quite well with measured experiment data.
LEADS-DC: A computer code for intense dc beam nonlinear transport simulation
无
2011-01-01
An intense dc beam nonlinear transport code has been developed. The code is written in Visual FORTRAN 6.6 and has ~13000 lines. The particle distribution in the transverse cross section is uniform or Gaussian. The space charge forces are calculated by the PIC (particle in cell) scheme, and the effects of the applied fields on the particle motion are calculated with the Lie algebraic method through the third order approximation. Obviously,the solutions to the equations of particle motion are self-consistent. The results obtained from the theoretical analysis have been put in the computer code. Many optical beam elements are contained in the code. So, the code can simulate the intense dc particle motions in the beam transport lines, high voltage dc accelerators and ion implanters.
Bode, P; Bode, Paul; Ostriker, Jeremiah P.
2003-01-01
An improved implementation of an N-body code for simulating collisionless cosmological dynamics is presented. TPM (Tree-Particle-Mesh) combines the PM method on large scales with a tree code to handle particle-particle interactions at small separations. After the global PM forces are calculated, spatially distinct regions above a given density contrast are located; the tree code calculates the gravitational interactions inside these denser objects at higher spatial and temporal resolution. The new implementation includes individual particle time steps within trees, an improved treatment of tidal forces on trees, new criteria for higher force resolution and choice of time step, and parallel treatment of large trees. TPM is compared to P^3M and a tree code (GADGET) and is found to give equivalent results in significantly less time. The implementation is highly portable (requiring a Fortran compiler and MPI) and efficient on parallel machines. The source code can be found at http://astro.princeton.edu/~bode/TPM/
NONE
2001-01-01
In the report, research results discussed in 1999 fiscal year at Nuclear Code Evaluation Committee of Nuclear Code Research Committee were summarized. Present status of Monte Carlo simulation on nuclear energy study was described. Especially, besides of criticality, shielding and core analyses, present status of applications to risk and radiation damage analyses, high energy transport and nuclear theory calculations of Monte Carlo Method was described. The 18 papers are indexed individually. (J.P.N.)
Picard, Richard Roy [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Bhat, Kabekode Ghanasham [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
2017-07-18
We examine sensitivity analysis and uncertainty quantification for molecular dynamics simulation. Extreme (large or small) output values for the LAMMPS code often occur at the boundaries of input regions, and uncertainties in those boundary values are overlooked by common SA methods. Similarly, input values for which code outputs are consistent with calibration data can also occur near boundaries. Upon applying approaches in the literature for imprecise probabilities (IPs), much more realistic results are obtained than for the complacent application of standard SA and code calibration.
Understanding Performance of Parallel Scientific Simulation Codes using Open|SpeedShop
Ghosh, K K
2011-11-07
Conclusions of this presentation are: (1) Open SpeedShop's (OSS) is convenient to use for large, parallel, scientific simulation codes; (2) Large codes benefit from uninstrumented execution; (3) Many experiments can be run in a short time - might need multiple shots e.g. usertime for caller-callee, hwcsamp for HW counters; (4) Decent idea of code's performance is easily obtained; (5) Statistical sampling calls for decent number of samples; and (6) HWC data is very useful for micro-analysis but can be tricky to analyze.
Srna-Monte Carlo codes for proton transport simulation in combined and voxelized geometries
Ilic, R D; Stankovic, S J
2002-01-01
This paper describes new Monte Carlo codes for proton transport simulations in complex geometrical forms and in materials of different composition. The SRNA codes were developed for three dimensional (3D) dose distribution calculation in proton therapy and dosimetry. The model of these codes is based on the theory of proton multiple scattering and a simple model of compound nucleus decay. The developed package consists of two codes: SRNA-2KG and SRNA-VOX. The first code simulates proton transport in combined geometry that can be described by planes and second order surfaces. The second one uses the voxelized geometry of material zones and is specifically adopted for the application of patient computer tomography data. Transition probabilities for both codes are given by the SRNADAT program. In this paper, we will present the models and algorithms of our programs, as well as the results of the numerical experiments we have carried out applying them, along with the results of proton transport simulation obtaine...
Development and Test of 2.5-Dimensional Electromagnetic PIC Simulation Code
Lee, Sang-Yun; Lee, Ensang; Kim, Khan-Hyuk; Seon, Jongho; Lee, Dong-Hun; Ryu, Kwang-Sun
2015-03-01
We have developed a 2.5-dimensional electromagnetic particle simulation code using the particle-in-cell (PIC) method to investigate electromagnetic phenomena that occur in space plasmas. Our code is based on the leap-frog method and the centered difference method for integration and differentiation of the governing equations. We adopted the relativistic Buneman-Boris method to solve the Lorentz force equation and the Esirkepov method to calculate the current density while maintaining charge conservation. Using the developed code, we performed test simulations for electron two-stream instability and electron temperature anisotropy induced instability with the same initial parameters as used in previously reported studies. The test simulation results are almost identical with those of the previous papers.
Cosmological AMR MHD with Enzo
Xu, Hao [Los Alamos National Laboratory; Li, Hui [Los Alamos National Laboratory; Li, Shengtai [Los Alamos National Laboratory
2009-01-01
In this work, we present EnzoMHD, the extension of the cosmological code Enzoto include magnetic fields. We use the hyperbolic solver of Li et al. (2008) for the computation of interface fluxes. We use constrained transport methods of Balsara & Spicer (1999) and Gardiner & Stone (2005) to advance the induction equation, the reconstruction technique of Balsara (2001) to extend the Adaptive Mesh Refinement of Berger & Colella (1989) already used in Enzo, though formulated in a slightly different way for ease of implementation. This combination of methods preserves the divergence of the magnetic field to machine precision. We use operator splitting to include gravity and cosmological expansion. We then present a series of cosmological and non cosmologjcal tests problems to demonstrate the quality of solution resulting from this combination of solvers.
RAY-RAMSES: a code for ray tracing on the fly in N-body simulations
Barreira, Alexandre; Bose, Sownak; Li, Baojiu
2016-01-01
We present a ray tracing code to compute integrated cosmological observables on the fly in AMR N-body simulations. Unlike conventional ray tracing techniques, our code takes full advantage of the time and spatial resolution attained by the N-body simulation by computing the integrals along the line of sight on a cell-by-cell basis through the AMR simulation grid. Moroever, since it runs on the fly in the N-body run, our code can produce maps of the desired observables without storing large (or any) amounts of data for post-processing. We implemented our routines in the RAMSES N-body code and tested the implementation using an example of weak lensing simulation. We analyse basic statistics of lensing convergence maps and find good agreement with semi-analytical methods. The ray tracing methodology presented here can be used in several cosmological analysis such as Sunyaev-Zel'dovich and integrated Sachs-Wolfe effect studies as well as modified gravity. Our code can also be used in cross-checks of the more conv...
Raley, E A; Plewa, T
2007-01-01
In order to determine the circumstances under which isolated SNRs are capable of rising into and enriching the thick disk and galactic halo, simulations of supernova remnants are performed with the FLASH magnetohydrodynamic code. We performed simulations in which the interstellar magnetic field is parallel to or perpendicular to the galactic plane as well as a simulation without a magnetic field. The ambient gas density distribution and gravitational potential are based on observations of our galaxy. We evolve the remnants to ages of roughly 10,000,000 years. For our simulation without a magnetic field, we compare the evolution of the hot bubble's velocity with the velocity evolution calculated from the buoyant and drag accelerations. We found surprisingly small vertical velocities of the hot gas, from which we estimated the drag coefficient to be ten for the non-magnetic simulation. Although we found little buoyant motion of the hot gas during the remnant's lifetime, we found rapid vertical motion of the ass...
A new GPU-accelerated hydrodynamical code for numerical simulation of interacting galaxies
Igor, Kulikov
2013-01-01
In this paper a new scalable hydrodynamic code GPUPEGAS (GPU-accelerated PErformance Gas Astrophysic Simulation) for simulation of interacting galaxies is proposed. The code is based on combination of Godunov method as well as on the original implementation of FlIC method, specially adapted for GPU-implementation. Fast Fourier Transform is used for Poisson equation solution in GPUPEGAS. Software implementation of the above methods was tested on classical gas dynamics problems, new Aksenov's test and classical gravitational gas dynamics problems. Collisionless hydrodynamic approach was used for modelling of stars and dark matter. The scalability of GPUPEGAS computational accelerators is shown.
Serfontein, Dawid E., E-mail: Dawid.Serfontein@nwu.ac.za [School of Mechanical and Nuclear Engineering, North West University (PUK-Campus), PRIVATE BAG X6001 (Internal Post Box 360), Potchefstroom 2520 (South Africa); Mulder, Eben J. [School of Mechanical and Nuclear Engineering, North West University (South Africa); Reitsma, Frederik [Calvera Consultants (South Africa)
2014-05-01
A computer code was developed for the semi-automatic translation of input models for the VSOP-A diffusion neutronics simulation code to the format of the newer VSOP 99/05 code. In this paper, this algorithm is presented as a generic method for producing codes for the automatic translation of input models from the format of one code version to another, or even to that of a completely different code. Normally, such translations are done manually. However, input model files, such as for the VSOP codes, often are very large and may consist of many thousands of numeric entries that make no particular sense to the human eye. Therefore the task, of for instance nuclear regulators, to verify the accuracy of such translated files can be very difficult and cumbersome. This may cause translation errors not to be picked up, which may have disastrous consequences later on when a reactor with such a faulty design is built. Therefore a generic algorithm for producing such automatic translation codes may ease the translation and verification process to a great extent. It will also remove human error from the process, which may significantly enhance the accuracy and reliability of the process. The developed algorithm also automatically creates a verification log file which permanently record the names and values of each variable used, as well as the list of meanings of all the possible values. This should greatly facilitate reactor licensing applications.
Inclusion of models to describe severe accident conditions in the fuel simulation code DIONISIO
Lemes, Martín; Soba, Alejandro [Sección Códigos y Modelos, Gerencia Ciclo del Combustible Nuclear, Comisión Nacional de Energía Atómica, Avenida General Paz 1499, 1650 San Martín, Provincia de Buenos Aires (Argentina); Daverio, Hernando [Gerencia Reactores y Centrales Nucleares, Comisión Nacional de Energía Atómica, Avenida General Paz 1499, 1650 San Martín, Provincia de Buenos Aires (Argentina); Denis, Alicia [Sección Códigos y Modelos, Gerencia Ciclo del Combustible Nuclear, Comisión Nacional de Energía Atómica, Avenida General Paz 1499, 1650 San Martín, Provincia de Buenos Aires (Argentina)
2017-04-15
The simulation of fuel rod behavior is a complex task that demands not only accurate models to describe the numerous phenomena occurring in the pellet, cladding and internal rod atmosphere but also an adequate interconnection between them. In the last years several models have been incorporated to the DIONISIO code with the purpose of increasing its precision and reliability. After the regrettable events at Fukushima, the need for codes capable of simulating nuclear fuels under accident conditions has come forth. Heat removal occurs in a quite different way than during normal operation and this fact determines a completely new set of conditions for the fuel materials. A detailed description of the different regimes the coolant may exhibit in such a wide variety of scenarios requires a thermal-hydraulic formulation not suitable to be included in a fuel performance code. Moreover, there exist a number of reliable and famous codes that perform this task. Nevertheless, and keeping in mind the purpose of building a code focused on the fuel behavior, a subroutine was developed for the DIONISIO code that performs a simplified analysis of the coolant in a PWR, restricted to the more representative situations and provides to the fuel simulation the boundary conditions necessary to reproduce accidental situations. In the present work this subroutine is described and the results of different comparisons with experimental data and with thermal-hydraulic codes are offered. It is verified that, in spite of its comparative simplicity, the predictions of this module of DIONISIO do not differ significantly from those of the specific, complex codes.
Leroy, Matthieu; Keppens, Rony
2016-04-01
The transfer of matter from the solar-wind to the Earth's magnetosphere during southward solar wind is mostly well understood but the processes governing the same phenomenon during northward solar wind remains to be fully apprehended. Numerous numerical studies have investigated the topic with many interesting results but most of these were considering two-dimensional situations with simplified magnetic configuration and often neglecting the inhomogeneities for the sake of clarity. Given the typical parameters at the magnetosphere-solar wind interface, the situation must be considered in the frame of Hall-MHD, due to the fact that the current layers widths and the gradient lengths can be in the order of the ion inertial length. As a consequence of Hall-MHD creating a third vector component from two planar ones, and also because magnetic perturbations can affect the field configuration at a distance in all directions and not only locally, three-dimensional treatment is necessary. In this spirit three-dimensional simulations of a configuration approaching the conditions leading to the development of Kelvin-Helmholtz instabilities at the flank of the magnetosphere during northward oriented solar-wind are performed as means to study the entry of solar-wind matter into Earth's magnetic field. In the scope of assessing the effect of the Hall-term in the physical processes, the simulations are also performed in the MHD frame. Furthermore the influence of the density and velocity jump through the shear layer on the rate of mass entering the magnetosphere is explored. Indeed, depending on the exact values of the physical quantities, the Kelvin-Helmholtz instability may have to compete with secondary instabilities and the non-linear phase may exhibit vortex merging and large-scale structures reorganisation, creating very different mixing layers, or generate different reconnection sites, locally and at a distance. These different configurations may have discernible signatures
FAST: a three-dimensional time-dependent FEL simulation code
Saldin, E L; Yurkov, M V
1999-01-01
In this report we briefly describe the three-dimensional, time-dependent FEL simulation code FAST. The equations of motion of the particles and Maxwell's equations are solved simultaneously taking into account the slippage effect. Radiation fields are calculated using an integral solution of Maxwell's equations. A special technique has been developed for fast calculations of the radiation field, drastically reducing the required CPU time. As a result, the developed code allows one to use a personal computer for time-dependent simulations. The code allows one to simulate the radiation from the electron bunch of any transverse and longitudinal bunch shape; to simulate simultaneously an external seed with superimposed noise in the electron beam; to take into account energy spread in the electron beam and the space charge fields; and to simulate a high-gain, high-efficiency FEL amplifier with a tapered undulator. It is important to note that there are no significant memory limitations in the developed code and an...
VisAn MHD: a toolbox in Matlab for MHD computer model data visualisation and analysis
P. Daum
2007-03-01
Full Text Available Among the many challenges facing modern space physics today is the need for a visualisation and analysis package which can examine the results from the diversity of numerical and empirical computer models as well as observational data. Magnetohydrodynamic (MHD models represent the latest numerical models of the complex Earth's space environment and have the unique ability to span the enormous distances present in the magnetosphere from several hundred kilometres to several thousand kilometres above the Earth surface. This feature enables scientist to study complex structures of processes where otherwise only point measurements from satellites or ground-based instruments are available. Only by combining these observational data and the MHD simulations it is possible to enlarge the scope of the point-to-point observations and to fill the gaps left by measurements in order to get a full 3-D representation of the processes in our geospace environment. In this paper we introduce the VisAn MHD toolbox for Matlab as a tool for the visualisation and analysis of observational data and MHD simulations. We have created an easy to use tool which is capable of highly sophisticated visualisations and data analysis of the results from a diverse set of MHD models in combination with in situ measurements from satellites and ground-based instruments. The toolbox is being released under an open-source licensing agreement to facilitate and encourage community use and contribution.
Patra, Anirban [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Tome, Carlos [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
2016-03-23
This Milestone report shows good progress in interfacing VPSC with the FE codes ABAQUS and MOOSE, to perform component-level simulations of irradiation-induced deformation in Zirconium alloys. In this preliminary application, we have performed an irradiation growth simulation in the quarter geometry of a cladding tube. We have benchmarked VPSC-ABAQUS and VPSC-MOOSE predictions with VPSC-SA predictions to verify the accuracy of the VPSCFE interface. Predictions from the FE simulations are in general agreement with VPSC-SA simulations and also with experimental trends.
MHD Simulations for Fusion Applications
Jardin, S.C. [Princeton Plasma Physics Laboratory, P.O. box 451, Princeton, NJ 08543 (United States)
2011-07-01
Nuclear fusion holds forth the promise of being a clean and safe solution to meet the world's energy demand in the foreseeable future without producing long-lived radioactive waste or weapons-grade material. The most mature configuration for magnetically confining a fusion plasma is the tokamak; a current carrying toroidal plasma characterized by strong externally produced magnetic fields. The temperatures, densities, and current will diffuse across the magnetic field lines at some rate, determining the confinement properties of the tokamak. The tokamak can also develop global instabilities if the current and/or pressure exceed certain instability thresholds. This set of lectures is aimed at describing analytical formulations and associated numerical methods for quantitatively describing both the slow (diffusive) motion associated with transport and the faster (wave-like) motion associated with instabilities. The former uses slow time scale ordering to remove the wave-like motion, and a time dependent field-aligned coordinate transformation to isolate the cross-field transport from the faster transport along the magnetic field lines. The latter uses a combination of high-order finite elements, a particular representation of the magnetic and velocity vector fields, and an implicit time advance algorithm with desirable properties. This paper is followed by the slides of the lectures. (author)
Chang, S.L.; Lottes, S.A.; Bouillard, J.X.; Petrick, M.
1997-11-01
This report covers application of Argonne National Laboratory`s (ANL`s) computer codes to simulation and analysis of components of the magnetohydrodynamic (MHD) power train system at the Component Development and Integration Facility (CDIF). Major components of the system include a 50-MWt coal-fired, two-stage combustor and an MHD channel. The combustor, designed and built by TRW, includes a deswirl section between the first and the second-stage combustor and a converging nozzle following the second-stage combustor, which connects to the MHD channel. ANL used computer codes to simulate and analyze flow characteristics in various components of the MHD system. The first-stage swirl combustor was deemed a mature technology and, therefore, was not included in the computer simulation. Several versions of the ICOMFLO computer code were used for the deswirl section and second-stage combustor. The MGMHD code, upgraded with a slag current leakage submodel, was used for the MHD channel. Whenever possible data from the test facilities were used to aid in calibrating parameters in the computer code, to validate the computer code, or to set base-case operating conditions for computations with the computer code. Extensive sensitivity and parametric studies were done on cold-flow mixing in the second-stage combustor, reacting flow in the second-stage combustor and converging nozzle, and particle-laden flow in the deswirl zone of the first-stage combustor, the second-stage combustor, and the converging nozzle. These simulations with subsequent analysis were able to show clearly in flow patterns and various computable measures of performance a number of sensitive and problematical areas in the design of the power train. The simulations of upstream components also provided inlet parameter profiles for simulation of the MHD power generating channel. 86 figs., 18 tabs.