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Sample records for methodology involves plotting

  1. Tracking Changes in Cardiac Output: Statistical Considerations on the 4-Quadrant Plot and the Polar Plot Methodology.

    Science.gov (United States)

    Saugel, Bernd; Grothe, Oliver; Wagner, Julia Y

    2015-08-01

    When comparing 2 technologies for measuring hemodynamic parameters with regard to their ability to track changes, 2 graphical tools are omnipresent in the literature: the 4-quadrant plot and the polar plot recently proposed by Critchley et al. The polar plot is thought to be the more advanced statistical tool, but care should be taken when it comes to its interpretation. The polar plot excludes possibly important measurements from the data. The polar plot transforms the data nonlinearily, which may prevent it from being seen clearly. In this article, we compare the 4-quadrant and the polar plot in detail and thoroughly describe advantages and limitations of each. We also discuss pitfalls concerning the methods to prepare the researcher for the sound use of both methods. Finally, we briefly revisit the Bland-Altman plot for the use in this context.

  2. Split-plot designs for multistage experimentation

    DEFF Research Database (Denmark)

    Kulahci, Murat; Tyssedal, John

    2016-01-01

    at the same time will be more efficient. However, there have been only a few attempts in the literature to provide an adequate and easy-to-use approach for this problem. In this paper, we present a novel methodology for constructing two-level split-plot and multistage experiments. The methodology is based...... be accommodated in each stage. Furthermore, split-plot designs for multistage experiments with good projective properties are also provided....

  3. Evaluating Plot Designs for the Tropics

    Science.gov (United States)

    Paul C. van Deusen; Bruce Bayle

    1991-01-01

    Theory and procedures are reviewed for determining the best type of plot for a given forest inventory. A general methodology is given that clarifies the relationship between different plot designs and the associated methods to produce the inventory estimates.

  4. Methodological issues involved in conducting qualitative research ...

    African Journals Online (AJOL)

    The purpose of this article is to describe the methodological issues involved in conducting qualitative research to explore and describe nurses' experience of being directly involved with termination of pregnancies and developing guidelines for support for these nurses. The article points out the sensitivity and responsibility ...

  5. Reaction Order Ambiguity in Integrated Rate Plots

    Science.gov (United States)

    Lee, Joe

    2008-01-01

    Integrated rate plots are frequently used in reaction kinetics to determine orders of reactions. It is often emphasised, when using this methodology in practice, that it is necessary to monitor the reaction to a substantial fraction of completion for these plots to yield unambiguous orders. The present article gives a theoretical and statistical…

  6. Effects of disease severity distribution on the performance of quantitative diagnostic methods and proposal of a novel 'V-plot' methodology to display accuracy values.

    Science.gov (United States)

    Petraco, Ricardo; Dehbi, Hakim-Moulay; Howard, James P; Shun-Shin, Matthew J; Sen, Sayan; Nijjer, Sukhjinder S; Mayet, Jamil; Davies, Justin E; Francis, Darrel P

    2018-01-01

    Diagnostic accuracy is widely accepted by researchers and clinicians as an optimal expression of a test's performance. The aim of this study was to evaluate the effects of disease severity distribution on values of diagnostic accuracy as well as propose a sample-independent methodology to calculate and display accuracy of diagnostic tests. We evaluated the diagnostic relationship between two hypothetical methods to measure serum cholesterol (Chol rapid and Chol gold ) by generating samples with statistical software and (1) keeping the numerical relationship between methods unchanged and (2) changing the distribution of cholesterol values. Metrics of categorical agreement were calculated (accuracy, sensitivity and specificity). Finally, a novel methodology to display and calculate accuracy values was presented (the V-plot of accuracies). No single value of diagnostic accuracy can be used to describe the relationship between tests, as accuracy is a metric heavily affected by the underlying sample distribution. Our novel proposed methodology, the V-plot of accuracies, can be used as a sample-independent measure of a test performance against a reference gold standard.

  7. Thickening the Plot.

    Science.gov (United States)

    Rose, Brian

    1979-01-01

    Examines the content of daytime serial dramas to determine how the narrative structure promotes a sense of involvement in viewers. Competing plot lines, the lack of a concrete sense of resolution, the pattern of episodes, and the audience's awareness of information kept secret from characters all contribute to audience involvement. (JMF)

  8. 137Cs profiles in erosion plots with different soil cultivation

    International Nuclear Information System (INIS)

    Andrello, A.C.; Appoloni, C.R.; Cassol, E.A.; Melquiades, F.L.

    2006-01-01

    Cesium-137 methodology has been successfully used to assess soil erosion. Seven erosion plots were sampled to determine the 137 Cs profile and to assess the erosion rates. Cesium-137 profile for native pasture plot showed an exponential decline below 5 cm depth, with little 137 Cs activity in the superficial layer (0-5 cm). Cesium-137 profile for wheat-soybean rotation plot in conventional tillage showed a uniform distribution with depth. For this plot, the soil loss occurs more in middle than upper and lower level. Cesium-137 profile for wheat-soybean rotation and wheat-maize rotation plots in no-tillage showed a similar result to the native pasture, with a minimum soil loss in the superficial layer. Cesium-137 profile for bare soil and cultivated pasture plots are similar, with a soil erosion rate of 229 t ha -1 year -1 . In the plots with a conventional tillage a greater soil loss occur in middle than upper and lower level. In no-tillage cultivation plots occurs soil loss in lower level, but no sign of soil loss neither gain in the upper level is observed. Cesium-137 methodology is a good tool to assess soil erosion and the 137 Cs profile gives a possibility to understand the soil erosion behavior in erosion plots. (author)

  9. Multiple hypothesis clustering in radar plot extraction

    NARCIS (Netherlands)

    Huizing, A.G.; Theil, A.; Dorp, Ph. van; Ligthart, L.P.

    1995-01-01

    False plots and plots with inaccurate range and Doppler estimates may severely degrade the performance of tracking algorithms in radar systems. This paper describes how a multiple hypothesis clustering technique can be applied to mitigate the problems involved in plot extraction. The measures of

  10. BliP PLOT : PLOT DISTRIBUSI DATA BERDIMENSI - SATU

    OpenAIRE

    Anisa Anisa; Indwiati Indwiati

    2014-01-01

    Blip Plot, adalah salah satu plot yang sibuat untuk menampilkan data berdimensi-satu. Pada dasarnya plot ini terdiri dari kotak, garis, dan titik. Sebagaimana plot distribusi berdimensi-satu yang lain, BliP Plot menampilkan nilai-nilai data individu dalam titik-titik atau garis-garis, dan informasi berkelompok dalam garis atau kotak. Kelebihannya, Blip Plot menampilkan banyak keistimewaan baru seperti plot variable-widht dan beberapa pilihan pola titik. Keuntungan utama dari Blip ...

  11. A narratological analysis of Mark 12:1-12: The plot of the Gospel of ...

    African Journals Online (AJOL)

    The purpose of this article is an attempt to read Mark 12: 1-12 in terms of the plot of the Gospel. Firstly a brief survey is given of the development of the term plot from Aristotle to the present, thereafter an own methodological point of departure concerning plot is formulated in order to study the plot of Mark. The conclusions ...

  12. Students' Involvement in Faculty Research: Ethical and Methodological Issues

    Directory of Open Access Journals (Sweden)

    Linda M. Ferguson

    2004-12-01

    Full Text Available Faculty who engage students as participants in their qualitative research often encounter methodological and ethical problems. Ethical issues arise from the fiduciary relationship between faculty and their students, and violations of that relationship occur when the educator has a dual role as researcher with those students. Methodological issues arise from research designs to address these ethical issues. This conflict is particularly evident in faculty research on pedagogy in their own disciplines, for which students are necessary as participants but are captive in the relationship. In this article, the authors explore the issues of double agency when faculty involve students as participants in their research.

  13. Methodology for Design and Analysis of Reactive Distillation Involving Multielement Systems

    DEFF Research Database (Denmark)

    Jantharasuk, Amnart; Gani, Rafiqul; Górak, Andrzej

    2011-01-01

    A new methodology for design and analysis of reactive distillation has been developed. In this work, the elementbased approach, coupled with a driving force diagram, has been extended and applied to the design of a reactive distillation column involving multielement (multicomponent) systems...... consisting of two components. Based on this methodology, an optimal design configuration is identified using the equivalent binary-element-driving force diagram. Two case studies of methyl acetate (MeOAc) synthesis and methyl-tert-butyl ether (MTBE) synthesis have been considered to demonstrate...... the successful applications of the methodology. Moreover, energy requirements for various column configurations corresponding to different feed locatio...

  14. Evaluation of the Soil Conservation Service curve number methodology using data from agricultural plots

    Science.gov (United States)

    Lal, Mohan; Mishra, S. K.; Pandey, Ashish; Pandey, R. P.; Meena, P. K.; Chaudhary, Anubhav; Jha, Ranjit Kumar; Shreevastava, Ajit Kumar; Kumar, Yogendra

    2017-01-01

    The Soil Conservation Service curve number (SCS-CN) method, also known as the Natural Resources Conservation Service curve number (NRCS-CN) method, is popular for computing the volume of direct surface runoff for a given rainfall event. The performance of the SCS-CN method, based on large rainfall (P) and runoff (Q) datasets of United States watersheds, is evaluated using a large dataset of natural storm events from 27 agricultural plots in India. On the whole, the CN estimates from the National Engineering Handbook (chapter 4) tables do not match those derived from the observed P and Q datasets. As a result, the runoff prediction using former CNs was poor for the data of 22 (out of 24) plots. However, the match was little better for higher CN values, consistent with the general notion that the existing SCS-CN method performs better for high rainfall-runoff (high CN) events. Infiltration capacity (fc) was the main explanatory variable for runoff (or CN) production in study plots as it exhibited the expected inverse relationship between CN and fc. The plot-data optimization yielded initial abstraction coefficient (λ) values from 0 to 0.659 for the ordered dataset and 0 to 0.208 for the natural dataset (with 0 as the most frequent value). Mean and median λ values were, respectively, 0.030 and 0 for the natural rainfall-runoff dataset and 0.108 and 0 for the ordered rainfall-runoff dataset. Runoff estimation was very sensitive to λ and it improved consistently as λ changed from 0.2 to 0.03.

  15. Intelligence Constraints on Terrorist Network Plots

    Science.gov (United States)

    Woo, Gordon

    Since 9/11, the western intelligence and law enforcement services have managed to interdict the great majority of planned attacks against their home countries. Network analysis shows that there are important intelligence constraints on the number and complexity of terrorist plots. If two many terrorists are involved in plots at a given time, a tipping point is reached whereby it becomes progressively easier for the dots to be joined and for the conspirators to be arrested, and for the aggregate evidence to secure convictions. Implications of this analysis are presented for the campaign to win hearts and minds.

  16. Considerations in Forest Growth Estimation Between Two Measurements of Mapped Forest Inventory Plots

    Science.gov (United States)

    Michael T. Thompson

    2006-01-01

    Several aspects of the enhanced Forest Inventory and Analysis (FIA) program?s national plot design complicate change estimation. The design incorporates up to three separate plot sizes (microplot, subplot, and macroplot) to sample trees of different sizes. Because multiple plot sizes are involved, change estimators designed for polyareal plot sampling, such as those...

  17. In-situ polymerization PLOT columns I: divinylbenzene

    Science.gov (United States)

    Shen, T. C.

    1992-01-01

    A novel method for preparation of porous-layer open-tubular (PLOT) columns is described. The method involves a simple and reproducible, straight-forward in-situ polymerization of monomer directly on the metal tube.

  18. Action research methodology in clinical pharmacy: how to involve and change.

    Science.gov (United States)

    Nørgaard, Lotte Stig; Sørensen, Ellen Westh

    2016-06-01

    Introduction The focus in clinical pharmacy practice is and has for the last 30-35 years been on changing the role of pharmacy staff into service orientation and patient counselling. One way of doing this is by involving staff in change process and as a researcher to take part in the change process by establishing partnerships with staff. On the background of the authors' widespread action research (AR)-based experiences, recommendations and comments for how to conduct an AR-study is described, and one of their AR-based studies illustrate the methodology and the research methods used. Methodology AR is defined as an approach to research which is based on a problem-solving relationship between researchers and clients, which aims at both solving a problem and at collaboratively generating new knowledge. Research questions relevant in AR-studies are: what was the working process in this change oriented study? What learning and/or changes took place? What challenges/pitfalls had to be overcome? What were the influence/consequences for the involved parts? When to use If you want to implement new services and want to involve staff and others in the process, an AR methodology is very suitable. The basic advantages of doing AR-based studies are grounded in their participatory and democratic basis and their starting point in problems experienced in practice. Limitations Some of the limitations in AR-studies are that neither of the participants in a project steering group are the only ones to decide. Furthermore, the collective process makes the decision-making procedures relatively complex.

  19. A robust methodology for kinetic model parameter estimation for biocatalytic reactions

    DEFF Research Database (Denmark)

    Al-Haque, Naweed; Andrade Santacoloma, Paloma de Gracia; Lima Afonso Neto, Watson

    2012-01-01

    lead to globally optimized parameter values. In this article, a robust methodology to estimate parameters for biocatalytic reaction kinetic expressions is proposed. The methodology determines the parameters in a systematic manner by exploiting the best features of several of the current approaches...... parameters, which are strongly correlated with each other. State-of-the-art methodologies such as nonlinear regression (using progress curves) or graphical analysis (using initial rate data, for example, the Lineweaver-Burke plot, Hanes plot or Dixon plot) often incorporate errors in the estimates and rarely...

  20. Product plots.

    Science.gov (United States)

    Wickham, Hadley; Hofmann, Heike

    2011-12-01

    We propose a new framework for visualising tables of counts, proportions and probabilities. We call our framework product plots, alluding to the computation of area as a product of height and width, and the statistical concept of generating a joint distribution from the product of conditional and marginal distributions. The framework, with extensions, is sufficient to encompass over 20 visualisations previously described in fields of statistical graphics and infovis, including bar charts, mosaic plots, treemaps, equal area plots and fluctuation diagrams. © 2011 IEEE

  1. Plot 3

    DEFF Research Database (Denmark)

    Lund, Inger-Lise; Gjessing, Susanne; Hermansen, Anne-Mette

    Plot 3 er første udgivelse af et alsidigt dansksystem til mellemtrinnet, hvor digitale medier er integreret i den daglige undervisning.......Plot 3 er første udgivelse af et alsidigt dansksystem til mellemtrinnet, hvor digitale medier er integreret i den daglige undervisning....

  2. The Half-Half Plot

    NARCIS (Netherlands)

    Einmahl, J.H.J.; Gantner, M.

    2009-01-01

    The Half-Half (HH) plot is a new graphical method to investigate qualitatively the shape of a regression curve. The empirical HH-plot counts observations in the lower and upper quarter of a strip that moves horizontally over the scatter plot. The plot displays jumps clearly and reveals further

  3. Nonlinear Dot Plots.

    Science.gov (United States)

    Rodrigues, Nils; Weiskopf, Daniel

    2018-01-01

    Conventional dot plots use a constant dot size and are typically applied to show the frequency distribution of small data sets. Unfortunately, they are not designed for a high dynamic range of frequencies. We address this problem by introducing nonlinear dot plots. Adopting the idea of nonlinear scaling from logarithmic bar charts, our plots allow for dots of varying size so that columns with a large number of samples are reduced in height. For the construction of these diagrams, we introduce an efficient two-way sweep algorithm that leads to a dense and symmetrical layout. We compensate aliasing artifacts at high dot densities by a specifically designed low-pass filtering method. Examples of nonlinear dot plots are compared to conventional dot plots as well as linear and logarithmic histograms. Finally, we include feedback from an expert review.

  4. Checking the Adequacy of Fit of Models from Split-Plot Designs

    DEFF Research Database (Denmark)

    Almini, A. A.; Kulahci, Murat; Montgomery, D. C.

    2009-01-01

    models. In this article, we propose the computation of two R-2, R-2-adjusted, prediction error sums of squares (PRESS), and R-2-prediction statistics to measure the adequacy of fit for the WP and the SP submodels in a split-plot design. This is complemented with the graphical analysis of the two types......One of the main features that distinguish split-plot experiments from other experiments is that they involve two types of experimental errors: the whole-plot (WP) error and the subplot (SP) error. Taking this into consideration is very important when computing measures of adequacy of fit for split-plot...... of errors to check for any violation of the underlying assumptions and the adequacy of fit of split-plot models. Using examples, we show how computing two measures of model adequacy of fit for each split-plot design model is appropriate and useful as they reveal whether the correct WP and SP effects have...

  5. Trellis plots as visual aids for analyzing split plot experiments

    DEFF Research Database (Denmark)

    Kulahci, Murat; Menon, Anil

    2017-01-01

    The analysis of split plot experiments can be challenging due to a complicated error structure resulting from restrictions on complete randomization. Similarly, standard visualization methods do not provide the insight practitioners desire to understand the data, think of explanations, generate...... hypotheses, build models, or decide on next steps. This article demonstrates the effective use of trellis plots in the preliminary data analysis for split plot experiments to address this problem. Trellis displays help to visualize multivariate data by allowing for conditioning in a general way. They can...

  6. A methodology for Electric Power Load Forecasting

    Directory of Open Access Journals (Sweden)

    Eisa Almeshaiei

    2011-06-01

    Full Text Available Electricity demand forecasting is a central and integral process for planning periodical operations and facility expansion in the electricity sector. Demand pattern is almost very complex due to the deregulation of energy markets. Therefore, finding an appropriate forecasting model for a specific electricity network is not an easy task. Although many forecasting methods were developed, none can be generalized for all demand patterns. Therefore, this paper presents a pragmatic methodology that can be used as a guide to construct Electric Power Load Forecasting models. This methodology is mainly based on decomposition and segmentation of the load time series. Several statistical analyses are involved to study the load features and forecasting precision such as moving average and probability plots of load noise. Real daily load data from Kuwaiti electric network are used as a case study. Some results are reported to guide forecasting future needs of this network.

  7. New user-friendly approach to obtain an Eisenberg plot and its use as a practical tool in protein sequence analysis.

    Science.gov (United States)

    Keller, Rob C A

    2011-01-01

    The Eisenberg plot or hydrophobic moment plot methodology is one of the most frequently used methods of bioinformatics. Bioinformatics is more and more recognized as a helpful tool in Life Sciences in general, and recent developments in approaches recognizing lipid binding regions in proteins are promising in this respect. In this study a bioinformatics approach specialized in identifying lipid binding helical regions in proteins was used to obtain an Eisenberg plot. The validity of the Heliquest generated hydrophobic moment plot was checked and exemplified. This study indicates that the Eisenberg plot methodology can be transferred to another hydrophobicity scale and renders a user-friendly approach which can be utilized in routine checks in protein-lipid interaction and in protein and peptide lipid binding characterization studies. A combined approach seems to be advantageous and results in a powerful tool in the search of helical lipid-binding regions in proteins and peptides. The strength and limitations of the Eisenberg plot approach itself are discussed as well. The presented approach not only leads to a better understanding of the nature of the protein-lipid interactions but also provides a user-friendly tool for the search of lipid-binding regions in proteins and peptides.

  8. The half-half plot

    NARCIS (Netherlands)

    Einmahl, J.H.J.; Gantner, M.

    2012-01-01

    The Half-Half (HH) plot is a new graphical method to investigate qualitatively the shape of a regression curve. The empirical HH-plot counts observations in the lower and upper quarter of a strip that moves horizontally over the scatterplot. The plot displays jumps clearly and reveals further

  9. Plasma physics plotting package

    International Nuclear Information System (INIS)

    Hyman, D.H.

    1981-02-01

    We describe a package of plotting routines that do up to six two- or three-dimensional plots on a frame with minimal loss of resolution. The package now runs on a PDP-10 with PLOT-10 TCS primitives and on a Control Data Corporation-7600 and a Cray-1 with TV80LIB primitives on the National Magnetic Fusion Energy Computer Center network. The package is portable to other graphics systems because only the primitive plot calls are used from the underlying system's graphics package

  10. MatrixPlot: visualizing sequence constraints

    DEFF Research Database (Denmark)

    Gorodkin, Jan; Stærfeldt, Hans Henrik; Lund, Ole

    1999-01-01

    MatrixPlot: visualizing sequence constraints. Sub-title Abstract Summary : MatrixPlot is a program for making high-quality matrix plots, such as mutual information plots of sequence alignments and distance matrices of sequences with known three-dimensional coordinates. The user can add information...

  11. Distributed plot-making

    DEFF Research Database (Denmark)

    Jensen, Lotte Groth; Bossen, Claus

    2016-01-01

    different socio-technical systems (paper-based and electronic patient records). Drawing on the theory of distributed cognition and narrative theory, primarily inspired by the work done within health care by Cheryl Mattingly, we propose that the creation of overview may be conceptualised as ‘distributed plot......-making’. Distributed cognition focuses on the role of artefacts, humans and their interaction in information processing, while narrative theory focuses on how humans create narratives through the plot construction. Hence, the concept of distributed plot-making highlights the distribution of information processing...

  12. NPLOT - NASTRAN PLOT

    Science.gov (United States)

    Mcentire, K.

    1994-01-01

    NPLOT is an interactive computer graphics program for plotting undeformed and deformed NASTRAN finite element models (FEMs). Although there are many commercial codes already available for plotting FEMs, these have limited use due to their cost, speed, and lack of features to view BAR elements. NPLOT was specifically developed to overcome these limitations. On a vector type graphics device the two best ways to show depth are by hidden line plotting or haloed line plotting. A hidden line algorithm generates views of models with all hidden lines removed, and a haloed line algorithm displays views with aft lines broken in order to show depth while keeping the entire model visible. A haloed line algorithm is especially useful for plotting models composed of many line elements and few surface elements. The most important feature of NPLOT is its ability to create both hidden line and haloed line views accurately and much more quickly than with any other existing hidden or haloed line algorithms. NPLOT is also capable of plotting a normal wire frame view to display all lines of a model. NPLOT is able to aid in viewing all elements, but it has special features not generally available for plotting BAR elements. These features include plotting of TRUE LENGTH and NORMALIZED offset vectors and orientation vectors. Standard display operations such as rotation and perspective are possible, but different view planes such as X-Y, Y-Z, and X-Z may also be selected. Another display option is the Z-axis cut which allows a portion of the fore part of the model to be cut away to reveal details of the inside of the model. A zoom function is available to terminals with a locator (graphics cursor, joystick, etc.). The user interface of NPLOT is designed to make the program quick and easy to use. A combination of menus and commands with help menus for detailed information about each command allows experienced users greater speed and efficiency. Once a plot is on the screen the interface

  13. Green leaf phenology at Landsat resolution: scaling from the plot to satellite

    Science.gov (United States)

    Fisher, J. I.; Mustard, J. F.; Vadeboncour, M.

    2005-12-01

    Despite the large number of in situ, plot-level phenological measurements and satellite-derived phenological studies, there has been little success to date in merging these records temporally or spatially. In particular, while most phenological patterns and trends derived from satellites appear realistic and coherent, they may not reflect spatial and temporal patterns at the plot level. An obvious explanation is the drastic scale difference from plot-level to most satellite observations. In this research, we bridge this scale gap through higher resolution satellite records (Landsat) and quantify the accuracy of satellite-derived metrics with direct field measurements. We compiled fifty-seven Landsat scenes from southern New England (P12 R51) from 1984 to 2002. Green vegetation areal abundance for each scene was derived from spectral mixture analysis and a single set of endmembers. The leaf area signal was fit with a logistic-growth simulating sigmoid curve to derive phenological markers (half-maximum leaf-onset and offset). Spring leaf-onset dates in homogenous stands of deciduous forests displayed significant and persistent local variability. The local variability was validated with multiple springtime ground observations (r2 = 0.91). The highest degree of verified small-scale variation occurred where contiguous forests displayed leaf-onset gradients of 10-14 days over short distances (example, our results indicate that deciduous forests in the Providence, RI metropolitan area leaf out 5-7 days earlier than comparable rural areas. In preliminary work, we validated the Landsat-derived metrics with similar analyses of MODIS and AVHRR, and demonstrate that aggregating diverse local phenologies into coarse grids may convolute interpretations. Despite these complications, the platform-independent curve-fit methodology may be extended across platforms and field data. The methodologically consistent approach, in tandem with Landsat data, allows us to effectively scale

  14. RHIC Data Correlation Methodology

    International Nuclear Information System (INIS)

    Michnoff, R.; D'Ottavio, T.; Hoff, L.; MacKay, W.; Satogata, T.

    1999-01-01

    A requirement for RHIC data plotting software and physics analysis is the correlation of data from all accelerator data gathering systems. Data correlation provides the capability for a user to request a plot of multiple data channels vs. time, and to make meaningful time-correlated data comparisons. The task of data correlation for RHIC requires careful consideration because data acquisition triggers are generated from various asynchronous sources including events from the RHIC Event Link, events from the two Beam Sync Links, and other unrelated clocks. In order to correlate data from asynchronous acquisition systems a common time reference is required. The RHIC data correlation methodology will allow all RHIC data to be converted to a common wall clock time, while still preserving native acquisition trigger information. A data correlation task force team, composed of the authors of this paper, has been formed to develop data correlation design details and provide guidelines for software developers. The overall data correlation methodology will be presented in this paper

  15. Alcohol- and Drug-Involved Driving in the United States: Methodology for the 2007 National Roadside Survey

    Science.gov (United States)

    Lacey, John H.; Kelley-Baker, Tara; Voas, Robert B.; Romano, Eduardo; Furr-Holden, C. Debra; Torres, Pedro; Berning, Amy

    2011-01-01

    This article describes the methodology used in the 2007 U.S. National Roadside Survey to estimate the prevalence of alcohol- and drug-impaired driving and alcohol- and drug-involved driving. This study involved randomly stopping drivers at 300 locations across the 48 continental U.S. states at sites selected through a stratified random sampling…

  16. Methodological issues involved in conducting qualitative research on support for nurses directly involved with women who chose to terminate their pregnancy

    Directory of Open Access Journals (Sweden)

    Antoinette Gmeiner

    2001-11-01

    Full Text Available The purpose of this article is to describe the methodological issues involved in conducting qualitative research to explore and describe nurses’ experience of being directly involved with termination of pregnancies and developing guidelines for support for these nurses. Opsomming Die doel van hierdie artikel is om die metodologiese vraagstukke te beskryf rondom die uitvoer van kwalitatiewe navorsing waar verpleegkundiges se ervaring van hul direkte betrokkenheid by terminasie van swangerskap verken en beskryf is. *Please note: This is a reduced version of the abstract. Please refer to PDF for full text.

  17. Density Distribution Sunflower Plots

    Directory of Open Access Journals (Sweden)

    William D. Dupont

    2003-01-01

    Full Text Available Density distribution sunflower plots are used to display high-density bivariate data. They are useful for data where a conventional scatter plot is difficult to read due to overstriking of the plot symbol. The x-y plane is subdivided into a lattice of regular hexagonal bins of width w specified by the user. The user also specifies the values of l, d, and k that affect the plot as follows. Individual observations are plotted when there are less than l observations per bin as in a conventional scatter plot. Each bin with from l to d observations contains a light sunflower. Other bins contain a dark sunflower. In a light sunflower each petal represents one observation. In a dark sunflower, each petal represents k observations. (A dark sunflower with p petals represents between /2-pk k and /2+pk k observations. The user can control the sizes and colors of the sunflowers. By selecting appropriate colors and sizes for the light and dark sunflowers, plots can be obtained that give both the overall sense of the data density distribution as well as the number of data points in any given region. The use of this graphic is illustrated with data from the Framingham Heart Study. A documented Stata program, called sunflower, is available to draw these graphs. It can be downloaded from the Statistical Software Components archive at http://ideas.repec.org/c/boc/bocode/s430201.html . (Journal of Statistical Software 2003; 8 (3: 1-5. Posted at http://www.jstatsoft.org/index.php?vol=8 .

  18. Difference and ratio plots

    DEFF Research Database (Denmark)

    Svendsen, Anders Jørgen; Holmskov, U; Bro, Peter

    1995-01-01

    and systemic lupus erythematosus from another previously published study (Macanovic, M. and Lachmann, P.J. (1979) Clin. Exp. Immunol. 38, 274) are also represented using ratio plots. Our observations indicate that analysis by regression analysis may often be misleading....... hitherto unnoted differences between controls and patients with either rheumatoid arthritis or systemic lupus erythematosus. For this we use simple, but unconventional, graphic representations of the data, based on difference plots and ratio plots. Differences between patients with Burkitt's lymphoma...

  19. 76 FR 11196 - Antidumping Methodologies in Proceedings Involving Non-Market Economies: Valuing the Factor of...

    Science.gov (United States)

    2011-03-01

    ... DEPARTMENT OF COMMERCE International Trade Administration Antidumping Methodologies in Proceedings Involving Non-Market Economies: Valuing the Factor of Production: Labor; Correction to Request for Comment...-Market Economies: Valuing the Factor of Production: Labor; Request for Comment, 76 FR 9544 (February 18...

  20. The importance of plot size and the number of sampling seasons on capturing macrofungal species richness.

    Science.gov (United States)

    Li, Huili; Ostermann, Anne; Karunarathna, Samantha C; Xu, Jianchu; Hyde, Kevin D; Mortimer, Peter E

    2018-07-01

    The species-area relationship is an important factor in the study of species diversity, conservation biology, and landscape ecology. A deeper understanding of this relationship is necessary, in order to provide recommendations on how to improve the quality of data collection on macrofungal diversity in different land use systems in future studies, a systematic assessment of methodological parameters, in particular optimal plot sizes. The species-area relationship of macrofungi in tropical and temperate climatic zones and four different land use systems were investigated by determining the macrofungal species richness in plot sizes ranging from 100 m 2 to 10 000 m 2 over two sampling seasons. We found that the effect of plot size on recorded species richness significantly differed between land use systems with the exception of monoculture systems. For both climate zones, land use system needs to be considered when determining optimal plot size. Using an optimal plot size was more important than temporal replication (over two sampling seasons) in accurately recording species richness. Copyright © 2018 British Mycological Society. Published by Elsevier Ltd. All rights reserved.

  1. The Wally plot approach to assess the calibration of clinical prediction models.

    Science.gov (United States)

    Blanche, Paul; Gerds, Thomas A; Ekstrøm, Claus T

    2017-12-06

    A prediction model is calibrated if, roughly, for any percentage x we can expect that x subjects out of 100 experience the event among all subjects that have a predicted risk of x%. Typically, the calibration assumption is assessed graphically but in practice it is often challenging to judge whether a "disappointing" calibration plot is the consequence of a departure from the calibration assumption, or alternatively just "bad luck" due to sampling variability. We propose a graphical approach which enables the visualization of how much a calibration plot agrees with the calibration assumption to address this issue. The approach is mainly based on the idea of generating new plots which mimic the available data under the calibration assumption. The method handles the common non-trivial situations in which the data contain censored observations and occurrences of competing events. This is done by building on ideas from constrained non-parametric maximum likelihood estimation methods. Two examples from large cohort data illustrate our proposal. The 'wally' R package is provided to make the methodology easily usable.

  2. AN EXPERIMENTAL ASSESSMENT OF THE PLATE HEAT EXCHANGER CHARACTERISTICS BY WILSON PLOT METHOD

    Directory of Open Access Journals (Sweden)

    Jan Opatřil

    2016-10-01

    Full Text Available An aim of this paper is suggestion of the evaluation method based on the experimental data and the Wilson plot method for the Plate Heat Exchangers (PHE. For the purpose of the project the new experimental loop was built for the testing of PHE to obtain the overhaul heat transfer coefficient and pressure drop between inlet and outlet of the fluid. The measurement were done for three different PHE with the performance range 30-100kW. The working fluid was water on both sides of the PHE. The differences are in number of pates as well as in extrusion profiles. The Wilson plot evaluation method was involved for the processing experimental data. To obtain more accurate correlations between the experimental data and theoretical results yield of the Wilson plot, the method was enhanced by the measured pressure drop involving. This approach could be useful for PHE designing software and for the manufacturing company.

  3. Isodose plotting for pen plotters

    International Nuclear Information System (INIS)

    Rosen, I.I.

    1985-01-01

    A general algorithm for treatment plan isodose line plotting is described which is particularly useful for pen plotters. Unlike other methods of plotting isodose lines, this algorithm is designed specifically to reduce pen motion, thereby reducing plotting time and wear on the transport mechanism. Points with the desired dose value are extracted from the dose matrix and stored, sorted into continuous contours, and then plotted. This algorithm has been implemented on DEC PDP-11/60 and VAX-11/780 computers for use with two models of Houston Instrument pen plotters, two models of Tektronix vector graphics terminals, a DEC VT125 raster graphics terminal, and a DEC VS11 color raster graphics terminal. Its execution time is similar to simpler direct-plotting methods

  4. Plotting system for the MINCS code

    International Nuclear Information System (INIS)

    Watanabe, Tadashi

    1990-08-01

    The plotting system for the MINCS code is described. The transient two-phase flow analysis code MINCS has been developed to provide a computational tool for analysing various two-phase flow phenomena in one-dimensional ducts. Two plotting systems, namely the SPLPLOT system and the SDPLOT system, can be used as the plotting functions. The SPLPLOT system is used for plotting time transients of variables, while the SDPLOT system is for spatial distributions. The SPLPLOT system is based on the SPLPACK system, which is used as a general tool for plotting results of transient analysis codes or experiments. The SDPLOT is based on the GPLP program, which is also regarded as one of the general plotting programs. In the SPLPLOT and the SDPLOT systems, the standardized data format called the SPL format is used in reading data to be plotted. The output data format of MINCS is translated into the SPL format by using the conversion system called the MINTOSPL system. In this report, how to use the plotting functions is described. (author)

  5. IPLOT, interactive MELCOR data plotting system

    International Nuclear Information System (INIS)

    2008-01-01

    1 - Description of program or function: IPLOT is an interactive MELCOR data plotting system. It provides several kinds of GUI interfaces for a flexible data plotting. IPLOT capabilities include creation, saving and loading of user specified MELCOR variables trend graphs. IPLOT can use one or several plot files for a graph generation while the graphs can be either in one window or in several windows. Besides IPLOT provides several graph convenient functions such as zooming, re-sizing, printing for a detail analysis of severe accidents. 2 - Methods: Trend values seeking in a plot file is performed by a binary search method for fast performance. 3 - Restrictions on the complexity of the problem: MELCOR plot files are required for plotting

  6. Insights into gait disorders: walking variability using phase plot analysis, Huntington's disease.

    Science.gov (United States)

    Collett, Johnny; Esser, Patrick; Khalil, Hanan; Busse, Monica; Quinn, Lori; DeBono, Katy; Rosser, Anne; Nemeth, Andrea H; Dawes, Helen

    2014-09-01

    Huntington's disease (HD) is a progressive inherited neurodegenerative disorder. Identifying sensitive methodologies to quantitatively measure early motor changes have been difficult to develop. This exploratory observational study investigated gait variability and symmetry in HD using phase plot analysis. We measured the walking of 22 controls and 35 HD gene carriers (7 premanifest (PreHD)), 16 early/mid (HD1) and 12 late stage (HD2) in Oxford and Cardiff, UK. The unified Huntington's disease rating scale-total motor scores (UHDRS-TMS) and disease burden scores (DBS) were used to quantify disease severity. Data was collected during a clinical walk test (8.8 or 10 m) using an inertial measurement unit attached to the trunk. The 6 middle strides were used to calculate gait variability determined by spatiotemporal parameters (co-efficient of variation (CoV)) and phase plot analysis. Phase plots considered the variability in consecutive wave forms from vertical movement and were quantified by SDA (spatiotemporal variability), SDB (temporal variability), ratio ∀ (ratio SDA:SDB) and Δangleβ (symmetry). Step time CoV was greater in manifest HD (p0.05). Phase plot analysis identified differences between manifest HD and controls for SDB, Ratio ∀ and Δangle (all pplot analysis may be a sensitive method of detecting gait changes in HD and can be performed quickly during clinical walking tests. Copyright © 2014 Elsevier B.V. All rights reserved.

  7. Normal probability plots with confidence.

    Science.gov (United States)

    Chantarangsi, Wanpen; Liu, Wei; Bretz, Frank; Kiatsupaibul, Seksan; Hayter, Anthony J; Wan, Fang

    2015-01-01

    Normal probability plots are widely used as a statistical tool for assessing whether an observed simple random sample is drawn from a normally distributed population. The users, however, have to judge subjectively, if no objective rule is provided, whether the plotted points fall close to a straight line. In this paper, we focus on how a normal probability plot can be augmented by intervals for all the points so that, if the population distribution is normal, then all the points should fall into the corresponding intervals simultaneously with probability 1-α. These simultaneous 1-α probability intervals provide therefore an objective mean to judge whether the plotted points fall close to the straight line: the plotted points fall close to the straight line if and only if all the points fall into the corresponding intervals. The powers of several normal probability plot based (graphical) tests and the most popular nongraphical Anderson-Darling and Shapiro-Wilk tests are compared by simulation. Based on this comparison, recommendations are given in Section 3 on which graphical tests should be used in what circumstances. An example is provided to illustrate the methods. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  8. Generalized Probability-Probability Plots

    NARCIS (Netherlands)

    Mushkudiani, N.A.; Einmahl, J.H.J.

    2004-01-01

    We introduce generalized Probability-Probability (P-P) plots in order to study the one-sample goodness-of-fit problem and the two-sample problem, for real valued data.These plots, that are constructed by indexing with the class of closed intervals, globally preserve the properties of classical P-P

  9. Fifth International Symposium on Recurrence Plot

    CERN Document Server

    Riley, Michael; Giuliani, Alessandro; Webber, Charles; Jr, Jr; Translational Recurrences : From Mathematical Theory to Real-World Applications

    2014-01-01

    This book features 13 papers presented at the Fifth International Symposium on Recurrence Plots, held August 2013 in Chicago, IL. It examines recent applications and developments in recurrence plots and recurrence quantifi cation analysis (RQA) with special emphasis on biological and cognitive systems and the analysis of coupled systems using cross-recurrence methods. Readers will discover new applications and insights into a range of systems provided by recurrence plot analysis and new theoretical and mathematical developments in recurrence plots. Recurrence plot based analysis is a powerful tool that operates on real-world complex systems that are nonlinear, non-stationary, noisy, of any statistical distribution, free of any particular model type, and not particularly long. Quantitative analyses promote the detection of system state changes, synchronized dynamical regimes, or classifi cation of system states. Th e book will be of interest to an interdisciplinary audience of recurrence plot users and researc...

  10. A first look at measurement error on FIA plots using blind plots in the Pacific Northwest

    Science.gov (United States)

    Susanna Melson; David Azuma; Jeremy S. Fried

    2002-01-01

    Measurement error in the Forest Inventory and Analysis work of the Pacific Northwest Station was estimated with a recently implemented blind plot measurement protocol. A small subset of plots was revisited by a crew having limited knowledge of the first crew's measurements. This preliminary analysis of the first 18 months' blind plot data indicates that...

  11. deltaPlotR: An R Package for Di?erential Item Functioning Analysis with Ango? s Delta Plot

    OpenAIRE

    David Magis; Bruno Facon

    2014-01-01

    Angoff's delta plot is a straightforward and not computationally intensive method to identify differential item functioning (DIF) among dichotomously scored items. This approach was recently improved by proposing an optimal threshold selection and by considering several item purification processes. Moreover, to support practical DIF analyses with the delta plot and these improvements, the R package deltaPlotR was also developed. The purpose of this paper is twofold: to outline the delta plot ...

  12. The harvest plot: A method for synthesising evidence about the differential effects of interventions

    Directory of Open Access Journals (Sweden)

    Sowden Amanda

    2008-02-01

    Full Text Available Abstract Background One attraction of meta-analysis is the forest plot, a compact overview of the essential data included in a systematic review and the overall 'result'. However, meta-analysis is not always suitable for synthesising evidence about the effects of interventions which may influence the wider determinants of health. As part of a systematic review of the effects of population-level tobacco control interventions on social inequalities in smoking, we designed a novel approach to synthesis intended to bring aspects of the graphical directness of a forest plot to bear on the problem of synthesising evidence from a complex and diverse group of studies. Methods We coded the included studies (n = 85 on two methodological dimensions (suitability of study design and quality of execution and extracted data on effects stratified by up to six different dimensions of inequality (income, occupation, education, gender, race or ethnicity, and age, distinguishing between 'hard' (behavioural and 'intermediate' (process or attitudinal outcomes. Adopting a hypothesis-testing approach, we then assessed which of three competing hypotheses (positive social gradient, negative social gradient, or no gradient was best supported by each study for each dimension of inequality. Results We plotted the results on a matrix ('harvest plot' for each category of intervention, weighting studies by the methodological criteria and distributing them between the competing hypotheses. These matrices formed part of the analytical process and helped to encapsulate the output, for example by drawing attention to the finding that increasing the price of tobacco products may be more effective in discouraging smoking among people with lower incomes and in lower occupational groups. Conclusion The harvest plot is a novel and useful method for synthesising evidence about the differential effects of population-level interventions. It contributes to the challenge of making best use

  13. F-15 inlet/engine test techniques and distortion methodologies studies. Volume 2: Time variant data quality analysis plots

    Science.gov (United States)

    Stevens, C. H.; Spong, E. D.; Hammock, M. S.

    1978-01-01

    Time variant data quality analysis plots were used to determine if peak distortion data taken from a subscale inlet model can be used to predict peak distortion levels for a full scale flight test vehicle.

  14. PLOT-3D, Graphics Subroutines for 3-D Surface Plots with Arbitrary Rotations

    International Nuclear Information System (INIS)

    Basinger, D.; Gvildys, J.

    1975-01-01

    1 - Description of problem or function: PLOT-3D is a package of sub- programs designed to draw three-dimensional surfaces from arrays of points (x,y,z). The surfaces can be drawn after arbitrary rotations about the three coordinate axes. 2 - Method of solution: PLOT-3D is a computer program to plot any surface for which each coordinate pair (x,y) is associated with a unique z in the set of points (x,y,z). It uses matrix transformation of the points to generate different views of the surface after arbitrary rotations about the three coordinate axes. Four versions of PLOT-3D are available. Output of version 1 and 3 is by film recorder. Output of version 2 and 4 is by CalComp plotter. Versions 3 and 4 do not draw lines which would be invisible to a viewer looking at an opaque surface, whereas versions 1 and 2 draw every line on the surface. 3 - Restrictions on the complexity of the problem: Versions 3 and 4 limit number of rows in arrays (x,y,z) to 100 and also number of columns in arrays (x,y,z) to 100

  15. [Conceptual and methodological issues involved in the research field of diagnostic reasoning].

    Science.gov (United States)

    Di Persia, Francisco N

    2016-05-01

    The psychopathological field is crossed by dilemmas that put in question its methodological, conceptual and philosophical filiations. Since the early works of Ey and Jaspers until recent work of Berrios it has been in question the position psychopathology has in the field of medicine in general, and in the field of psychiatry in particular, especially if it should follow the principles of natural science or if it has an autonomous position between them. This debate has led to two opposing positions facing two different models of psychopathology: the biomedical model and the socio-constructionist model. In this work it is proposed to review the scope and difficulties involved in each model following two central axes: diagnostic reasoning and mental illness conceptual problem. Later, as a synthesis of the analysis proposed they are identified central concepts of each model that could allow the development of a hybrid model in psychopathology; in between them the comprehensive framework employed in symptoms recognition and the social component that characterizes it are highlighted. As a conclusion, these concepts are proposed as central aspects for conceptual and methodological clarification of the research field of diagnostic reasoning in psychopathology.

  16. Plot 5

    DEFF Research Database (Denmark)

    Lund, Inger-Lise; Hermansen, Anne-Mette; Ferdinand, Trine

    Danskfaglig vejledning informerer om de tanker, der ligger til grund for Plot 5, og beskriver danskfaget ud fra nyere forskning inden for fagets mange delområder. Kapitelvejledning introducerer bogens tekster, forklarer hensigten med kapitlernes opgaver, giver forslag til undervisningen og brugen...

  17. Plot 4

    DEFF Research Database (Denmark)

    Lund, Inger-Lise; Hermansen, Anne-Mette; Ferdinand, Trine

    Danskfaglig vejledning informerer om de tanker, der ligger til grund for Plot 4, og beskriver danskfaget ud fra nyere forskning inden for fagets mange delområder. Kapitelvejledning introducerer bogens tekster, forklarer hensigten med kapitlernes opgaver, giver forslag til undervisningen og brugen...

  18. New applications of partial residual methodology

    International Nuclear Information System (INIS)

    Uslu, V.R.

    1999-12-01

    The formulation of a problem of interest in the framework of a statistical analysis starts with collecting the data, choosing a model, making certain assumptions as described in the basic paradigm by Box (1980). This stage is is called model building. Then the estimation stage is in order by pretending as if the formulation of the problem was true to obtain estimates, to make tests and inferences. In the final stage, called diagnostic checking, checking of whether there are some disagreements between the data and the model fitted is done by using diagnostic measures and diagnostic plots. It is well known that statistical methods perform best under the condition that all assumptions related to the methods are satisfied. However it is true that having the ideal case in practice is very difficult. Diagnostics are therefore becoming important so are diagnostic plots because they provide a immediate assessment. Partial residual plots that are the main interest of the present study are playing the major role among the diagnostic plots in multiple regression analysis. In statistical literature it is admitted that partial residual plots are more useful than ordinary residual plots in detecting outliers, nonconstant variance, and especially discovering curvatures. In this study we consider the partial residual methodology in statistical methods rather than multiple regression. We have shown that for the same purpose as in the multiple regression the use of partial residual plots is possible particularly in autoregressive time series models, transfer function models, linear mixed models and ridge regression. (author)

  19. Representing uncertainty on model analysis plots

    Directory of Open Access Journals (Sweden)

    Trevor I. Smith

    2016-09-01

    Full Text Available Model analysis provides a mechanism for representing student learning as measured by standard multiple-choice surveys. The model plot contains information regarding both how likely students in a particular class are to choose the correct answer and how likely they are to choose an answer consistent with a well-documented conceptual model. Unfortunately, Bao’s original presentation of the model plot did not include a way to represent uncertainty in these measurements. I present details of a method to add error bars to model plots by expanding the work of Sommer and Lindell. I also provide a template for generating model plots with error bars.

  20. Presenting simulation results in a nested loop plot.

    Science.gov (United States)

    Rücker, Gerta; Schwarzer, Guido

    2014-12-12

    Statisticians investigate new methods in simulations to evaluate their properties for future real data applications. Results are often presented in a number of figures, e.g., Trellis plots. We had conducted a simulation study on six statistical methods for estimating the treatment effect in binary outcome meta-analyses, where selection bias (e.g., publication bias) was suspected because of apparent funnel plot asymmetry. We varied five simulation parameters: true treatment effect, extent of selection, event proportion in control group, heterogeneity parameter, and number of studies in meta-analysis. In combination, this yielded a total number of 768 scenarios. To present all results using Trellis plots, 12 figures were needed. Choosing bias as criterion of interest, we present a 'nested loop plot', a diagram type that aims to have all simulation results in one plot. The idea was to bring all scenarios into a lexicographical order and arrange them consecutively on the horizontal axis of a plot, whereas the treatment effect estimate is presented on the vertical axis. The plot illustrates how parameters simultaneously influenced the estimate. It can be combined with a Trellis plot in a so-called hybrid plot. Nested loop plots may also be applied to other criteria such as the variance of estimation. The nested loop plot, similar to a time series graph, summarizes all information about the results of a simulation study with respect to a chosen criterion in one picture and provides a suitable alternative or an addition to Trellis plots.

  1. Contour plotting programs for printer and Calcomp plotter

    International Nuclear Information System (INIS)

    Moller, P.

    1980-07-01

    Contour plotting programs for plotting contour diagrams on printers or Calcomp plotters are described. The subroutines also exist in versions that are useful for the special application of finding minima and saddlepoints of nuclear potential energy surfaces generated by the subroutine PETR3 of another program package. For the general user, however, the most interesting aspect of the plotting package is probably the possibility of generating printer contour plots. The plotting of printer contour plots is a very fast and convenient way of displaying two-dimensional functions. 3 figures

  2. Plot til lyst

    DEFF Research Database (Denmark)

    Sandvik, Kjetil

    Den velfungerende krimi faciliterer denne dobbelte plotlæsning ved at muliggøre en særlig form for legende og udforskende interaktion mellem læser og plot: Ved at lægge spor ud og holde tolkningsmuligheder og løsningsmuligheder åbne får vi mulighed for at påtage os og udføre opklaringsarbejdet side......, der inviterer os med ind i selve handlingens rum og forløb og giver os forskellige handlingsmuligheder i forhold til disse. I bogen omtales denne særlige form for plot for forlystelsesplot med henvisning til forlystelsesparken og den særlige form for interaktiv fortælleform, som vi finder der: en...

  3. The rainfall plot: its motivation, characteristics and pitfalls.

    Science.gov (United States)

    Domanska, Diana; Vodák, Daniel; Lund-Andersen, Christin; Salvatore, Stefania; Hovig, Eivind; Sandve, Geir Kjetil

    2017-05-18

    A visualization referred to as rainfall plot has recently gained popularity in genome data analysis. The plot is mostly used for illustrating the distribution of somatic cancer mutations along a reference genome, typically aiming to identify mutation hotspots. In general terms, the rainfall plot can be seen as a scatter plot showing the location of events on the x-axis versus the distance between consecutive events on the y-axis. Despite its frequent use, the motivation for applying this particular visualization and the appropriateness of its usage have never been critically addressed in detail. We show that the rainfall plot allows visual detection even for events occurring at high frequency over very short distances. In addition, event clustering at multiple scales may be detected as distinct horizontal bands in rainfall plots. At the same time, due to the limited size of standard figures, rainfall plots might suffer from inability to distinguish overlapping events, especially when multiple datasets are plotted in the same figure. We demonstrate the consequences of plot congestion, which results in obscured visual data interpretations. This work provides the first comprehensive survey of the characteristics and proper usage of rainfall plots. We find that the rainfall plot is able to convey a large amount of information without any need for parameterization or tuning. However, we also demonstrate how plot congestion and the use of a logarithmic y-axis may result in obscured visual data interpretations. To aid the productive utilization of rainfall plots, we demonstrate their characteristics and potential pitfalls using both simulated and real data, and provide a set of practical guidelines for their proper interpretation and usage.

  4. Methodology for the Regulation of Boom Sprayers Operating in Circular Trajectories

    Directory of Open Access Journals (Sweden)

    Alfredo Serreta

    2011-04-01

    Full Text Available A methodology for the regulation of boom sprayers working in circular trajectories has been developed. In this type of trajectory, the areas of the plots of land treated by the outer nozzles of the boom are treated at reduced rates, and those treated by the inner nozzles are treated in excess. The goal of this study was to establish the methodology to determine the flow of the individual nozzles on the boom to guarantee that the dose of the product applied per surface unit is similar across the plot. This flow is a function of the position of the equipment (circular trajectory radius and of the displacement velocity such that the treatment applied per surface unit is uniform. GPS technology was proposed as a basis to establish the position and displacement velocity of the tractor. The viability of this methodology was simulated considering two circular plots with radii of 160 m and 310 m, using three sets of equipment with boom widths of 14.5, 24.5 and 29.5 m. Data showed as increasing boom widths produce bigger errors in the surface dose applied (L/m2. Error also increases with decreasing plot surface. As an example, considering the three boom widths of 14.5, 24.5 and 29.5 m working on a circular plot with a radius of 160 m, the percentage of surface with errors in the applied surface dose greater than 5% was 30%, 58% and 65% respectively. Considering a circular plot with radius of 310 m the same errors were 8%, 22% and 31%. To obtain a uniform superficial dose two sprayer regulation alternatives have been simulated considering a 14.5 m boom: the regulation of the pressure of each nozzle and the regulation of the pressure of each boom section. The viability of implementing the proposed methodology on commercial boom sprayers using GPS antennas to establish the position and displacement velocity of the tractor was justified with a field trial in which a self-guiding commercial GPS system was used along with three precision GPS systems located in

  5. Plot-scale field experiment of surface hydrologic processes with EOS implications

    Science.gov (United States)

    Laymon, Charles A.; Macari, Emir J.; Costes, Nicholas C.

    1992-01-01

    Plot-scale hydrologic field studies were initiated at NASA Marshall Space Flight Center to a) investigate the spatial and temporal variability of surface and subsurface hydrologic processes, particularly as affected by vegetation, and b) develop experimental techniques and associated instrumentation methodology to study hydrologic processes at increasingly large spatial scales. About 150 instruments, most of which are remotely operated, have been installed at the field site to monitor ground atmospheric conditions, precipitation, interception, soil-water status, and energy flux. This paper describes the nature of the field experiment, instrumentation and sampling rationale, and presents preliminary findings.

  6. Storytelling in Earth sciences: The eight basic plots

    Science.gov (United States)

    Phillips, Jonathan

    2012-11-01

    Reporting results and promoting ideas in science in general, and Earth science in particular, is treated here as storytelling. Just as in literature and drama, storytelling in Earth science is characterized by a small number of basic plots. Though the list is not exhaustive, and acknowledging that multiple or hybrid plots and subplots are possible in a single piece, eight standard plots are identified, and examples provided: cause-and-effect, genesis, emergence, destruction, metamorphosis, convergence, divergence, and oscillation. The plots of Earth science stories are not those of literary traditions, nor those of persuasion or moral philosophy, and deserve separate consideration. Earth science plots do not conform those of storytelling more generally, implying that Earth scientists may have fundamentally different motivations than other storytellers, and that the basic plots of Earth Science derive from the characteristics and behaviors of Earth systems. In some cases preference or affinity to different plots results in fundamentally different interpretations and conclusions of the same evidence. In other situations exploration of additional plots could help resolve scientific controversies. Thus explicit acknowledgement of plots can yield direct scientific benefits. Consideration of plots and storytelling devices may also assist in the interpretation of published work, and can help scientists improve their own storytelling.

  7. CPdock: the complementarity plot for docking of proteins: implementing multi-dielectric continuum electrostatics.

    Science.gov (United States)

    Basu, Sankar

    2017-12-07

    The complementarity plot (CP) is an established validation tool for protein structures, applicable to both globular proteins (folding) as well as protein-protein complexes (binding). It computes the shape and electrostatic complementarities (S m , E m ) for amino acid side-chains buried within the protein interior or interface and plots them in a two-dimensional plot having knowledge-based probabilistic quality estimates for the residues as well as for the whole structure. The current report essentially presents an upgraded version of the plot with the implementation of the advanced multi-dielectric functionality (as in Delphi version 6.2 or higher) in the computation of electrostatic complementarity to make the validation tool physico-chemically more realistic. The two methods (single- and multi-dielectric) agree decently in their resultant E m values, and hence, provisions for both methods have been kept in the software suite. So to speak, the global electrostatic balance within a well-folded protein and/or a well-packed interface seems only marginally perturbed by the choice of different internal dielectric values. However, both from theoretical as well as practical grounds, the more advanced multi-dielectric version of the plot is certainly recommended for potentially producing more reliable results. The report also presents a new methodology and a variant plot, namely CP dock , based on the same principles of complementarity specifically designed to be used in the docking of proteins. The efficacy of the method to discriminate between good and bad docked protein complexes has been tested on a recent state-of-the-art docking benchmark. The results unambiguously indicate that CP dock can indeed be effective in the initial screening phase of a docking scoring pipeline before going into more sophisticated and computationally expensive scoring functions. CP dock has been made available at https://github.com/nemo8130/CPdock . Graphical Abstract An example showing

  8. Vegetation resurvey is robust to plot location uncertainty

    Science.gov (United States)

    Kopecký, Martin; Macek, Martin

    2017-01-01

    Aim Resurveys of historical vegetation plots are increasingly used for the assessment of decadal changes in plant species diversity and composition. However, historical plots are usually relocated only approximately. This potentially inflates temporal changes and undermines results. Location Temperate deciduous forests in Central Europe. Methods To explore if robust conclusions can be drawn from resurvey studies despite location uncertainty, we compared temporal changes in species richness, frequency, composition and compositional heterogeneity between exactly and approximately relocated plots. We hypothesized that compositional changes should be lower and changes in species richness should be less variable on exactly relocated plots, because pseudo-turnover inflates temporal changes on approximately relocated plots. Results Temporal changes in species richness were not more variable and temporal changes in species composition and compositional heterogeneity were not higher on approximately relocated plots. Moreover, the frequency of individual species changed similarly on both plot types. Main conclusions The resurvey of historical vegetation plots is robust to uncertainty in original plot location and, when done properly, provides reliable evidence of decadal changes in plant communities. This provides important background for other resurvey studies and opens up the possibility for large-scale assessments of plant community change. PMID:28503083

  9. 9 CFR 108.3 - Preparation of plot plans.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Preparation of plot plans. 108.3... LICENSED ESTABLISHMENTS § 108.3 Preparation of plot plans. Plot plans shall show all of the buildings on a... on the plot plan the use of immediate adjacent properties such as, residential area, pasture, box...

  10. SutraPlot, a graphical post-processor for SUTRA, a model for ground-water flow with solute or energy transport

    Science.gov (United States)

    Souza, W.R.

    1999-01-01

    This report documents a graphical display post-processor (SutraPlot) for the U.S. Geological Survey Saturated-Unsaturated flow and solute or energy TRAnsport simulation model SUTRA, Version 2D3D.1. This version of SutraPlot is an upgrade to SutraPlot for the 2D-only SUTRA model (Souza, 1987). It has been modified to add 3D functionality, a graphical user interface (GUI), and enhanced graphic output options. Graphical options for 2D SUTRA (2-dimension) simulations include: drawing the 2D finite-element mesh, mesh boundary, and velocity vectors; plots of contours for pressure, saturation, concentration, and temperature within the model region; 2D finite-element based gridding and interpolation; and 2D gridded data export files. Graphical options for 3D SUTRA (3-dimension) simulations include: drawing the 3D finite-element mesh; plots of contours for pressure, saturation, concentration, and temperature in 2D sections of the 3D model region; 3D finite-element based gridding and interpolation; drawing selected regions of velocity vectors (projected on principal coordinate planes); and 3D gridded data export files. Installation instructions and a description of all graphic options are presented. A sample SUTRA problem is described and three step-by-step SutraPlot applications are provided. In addition, the methodology and numerical algorithms for the 2D and 3D finite-element based gridding and interpolation, developed for SutraPlot, are described. 1

  11. FLOWPLOT2, 2-D, 3-D Fluid Dynamic Plots

    International Nuclear Information System (INIS)

    Cobb, C.K.; Tunstall, J.N.

    1989-01-01

    1 - Description of program or function: FLOWPLOT2 is a plotting program used with numerical or analytical fluid dynamics codes to create velocity vector plots, contour plots of up to three fluid parameters (e.g. pressure, density, and temperature), two-dimensional profile plots, three-dimensional curve plots, and/or three-dimensional surface plots for either the u or v velocity components. If the fluid dynamics code computes a transient or simulated time related solution, FLOWPLOT2 can also be used to generate these plots for any specified time interval. Multiple cases generating different plots for different time intervals may be run in one execution of the program. In addition, plots can be created for selected two- dimensional planes of three-dimensional steady-state problems. The user has the option of producing plots on CalComp or Versatec plotters or microfiche and of creating a compressed dataset before plotting. 2 - Method of solution: FLOWPLOT2 reads a dataset written by the fluid dynamics code. This dataset must be written in a specified format and must contain parametric data at the nodal points of a uniform or non-uniform rectangular grid formed by the intersection of the grid lines of the model. 3 - Restrictions on the complexity of the problem - Maxima of: 2500 nodes, 40 y-values for 2-D profile plots and 3-D curve plots, 20 contour values, 3 fluid parameters

  12. GENPLOT: A formula-based Pascal program for data manipulation and plotting

    Science.gov (United States)

    Kramer, Matthew J.

    Geochemical processes involving alteration, differentiation, fractionation, or migration of elements may be elucidated by a number of discrimination or variation diagrams (e.g., AFM, Harker, Pearce, and many others). The construction of these diagrams involves arithmetic combination of selective elements (involving major, minor, or trace elements). GENPLOT utilizes a formula-based algorithm (an expression parser) which enables the program to manipulate multiparameter databases and plot XY, ternary, tetrahedron, and REE type plots without needing to change either the source code or rearranging databases. Formulae may be any quadratic expression whose variables are the column headings of the data matrix. A full-screen editor with limited equations and arithmetic functions (spreadsheet) has been incorporated into the program to aid data entry and editing. Data are stored as ASCII files to facilitate interchange of data between other programs and computers. GENPLOT was developed in Turbo Pascal for the IBM and compatible computers but also is available in Apple Pascal for the Apple Ile and Ill. Because the source code is too extensive to list here (about 5200 lines of Pascal code), the expression parsing routine, which is central to GENPLOT's flexibility is incorporated into a smaller demonstration program named SOLVE. The following paper includes a discussion on how the expression parser works and a detailed description of GENPLOT's capabilities.

  13. Emotional characters for automatic plot creation

    NARCIS (Netherlands)

    Theune, Mariet; Rensen, S.; op den Akker, Hendrikus J.A.; Heylen, Dirk K.J.; Nijholt, Antinus; Göbel, S.; Spierling, U.; Hoffmann, A.; Iurgel, I.; Schneider, O.; Dechau, J.; Feix, A.

    The Virtual Storyteller is a multi-agent framework for automatic story generation. In this paper we describe how plots emerge from the actions of semi-autonomous character agents, focusing on the influence of the characters’ emotions on plot development.

  14. Analysis and Visualization of ChIP-Seq and RNA-Seq Sequence Alignments Using ngs.plot.

    Science.gov (United States)

    Loh, Yong-Hwee Eddie; Shen, Li

    2016-01-01

    The continual maturation and increasing applications of next-generation sequencing technology in scientific research have yielded ever-increasing amounts of data that need to be effectively and efficiently analyzed and innovatively mined for new biological insights. We have developed ngs.plot-a quick and easy-to-use bioinformatics tool that performs visualizations of the spatial relationships between sequencing alignment enrichment and specific genomic features or regions. More importantly, ngs.plot is customizable beyond the use of standard genomic feature databases to allow the analysis and visualization of user-specified regions of interest generated by the user's own hypotheses. In this protocol, we demonstrate and explain the use of ngs.plot using command line executions, as well as a web-based workflow on the Galaxy framework. We replicate the underlying commands used in the analysis of a true biological dataset that we had reported and published earlier and demonstrate how ngs.plot can easily generate publication-ready figures. With ngs.plot, users would be able to efficiently and innovatively mine their own datasets without having to be involved in the technical aspects of sequence coverage calculations and genomic databases.

  15. Split-plot designs for robotic serial dilution assays.

    Science.gov (United States)

    Buzas, Jeffrey S; Wager, Carrie G; Lansky, David M

    2011-12-01

    This article explores effective implementation of split-plot designs in serial dilution bioassay using robots. We show that the shortest path for a robot to fill plate wells for a split-plot design is equivalent to the shortest common supersequence problem in combinatorics. We develop an algorithm for finding the shortest common supersequence, provide an R implementation, and explore the distribution of the number of steps required to implement split-plot designs for bioassay through simulation. We also show how to construct collections of split plots that can be filled in a minimal number of steps, thereby demonstrating that split-plot designs can be implemented with nearly the same effort as strip-plot designs. Finally, we provide guidelines for modeling data that result from these designs. © 2011, The International Biometric Society.

  16. Application of mapped plots for single-owner forest surveys

    Science.gov (United States)

    Paul C. Van Deusen; Francis Roesch

    2009-01-01

    Mapped plots are used for the nation forest inventory conducted by the U.S. Forest Service. Mapped plots are also useful foro single ownership inventoires. Mapped plots can handle boundary overlap and can aprovide less variable estimates for specified forest conditions. Mapping is a good fit for fixed plot inventories where the fixed area plot is used for both mapping...

  17. Box Plots in the Australian Curriculum

    Science.gov (United States)

    Watson, Jane M.

    2012-01-01

    This article compares the definition of "box plot" as used in the "Australian Curriculum: Mathematics" with other definitions used in the education community; describes the difficulties students experience when dealing with box plots; and discusses the elaboration that is necessary to enable teachers to develop the knowledge…

  18. Hypothetical Outcome Plots Outperform Error Bars and Violin Plots for Inferences about Reliability of Variable Ordering.

    Science.gov (United States)

    Hullman, Jessica; Resnick, Paul; Adar, Eytan

    2015-01-01

    Many visual depictions of probability distributions, such as error bars, are difficult for users to accurately interpret. We present and study an alternative representation, Hypothetical Outcome Plots (HOPs), that animates a finite set of individual draws. In contrast to the statistical background required to interpret many static representations of distributions, HOPs require relatively little background knowledge to interpret. Instead, HOPs enables viewers to infer properties of the distribution using mental processes like counting and integration. We conducted an experiment comparing HOPs to error bars and violin plots. With HOPs, people made much more accurate judgments about plots of two and three quantities. Accuracy was similar with all three representations for most questions about distributions of a single quantity.

  19. Alcohol- and Drug-Involved Driving in the United States: Methodology for the 2007 National Roadside Survey

    Science.gov (United States)

    Lacey, John H.; Kelley-Baker, Tara; Voas, Robert B.; Romano, Eduardo; Furr-Holden, C. Debra; Torres, Pedro; Berning, Amy

    2013-01-01

    This article describes the methodology used in the 2007 U.S. National Roadside Survey to estimate the prevalence of alcohol- and drug-impaired driving and alcohol- and drug-involved driving. This study involved randomly stopping drivers at 300 locations across the 48 continental U.S. states at sites selected through a stratified random sampling procedure. Data were collected during a 2-hour Friday daytime session at 60 locations and during 2-hour nighttime weekend periods at 240 locations. Both self-report and biological measures were taken. Biological measures included breath alcohol measurements from 9,413 respondents, oral fluid samples from 7,719 respondents, and blood samples from 3,276 respondents. PMID:21997324

  20. Split-plot fractional designs: Is minimum aberration enough?

    DEFF Research Database (Denmark)

    Kulahci, Murat; Ramirez, Jose; Tobias, Randy

    2006-01-01

    Split-plot experiments are commonly used in industry for product and process improvement. Recent articles on designing split-plot experiments concentrate on minimum aberration as the design criterion. Minimum aberration has been criticized as a design criterion for completely randomized fractional...... factorial design and alternative criteria, such as the maximum number of clear two-factor interactions, are suggested (Wu and Hamada (2000)). The need for alternatives to minimum aberration is even more acute for split-plot designs. In a standard split-plot design, there are several types of two...... for completely randomized designs. Consequently, we provide a modified version of the maximum number of clear two-factor interactions design criterion to be used for split-plot designs....

  1. Evaluation in health: participatory methodology and involvement of municipal managers.

    Science.gov (United States)

    Almeida, Cristiane Andrea Locatelli de; Tanaka, Oswaldo Yoshimi

    2016-08-04

    To analyze scopes and limits of the use of participatory methodology of evaluation with municipal health managers and administrators. Qualitative research with health policymakers and managers of the Comissão Intergestores Regional (CIR - Regional Interagency Commission) of a health region of the state of Sao Paulo in Brazil. Representatives from seven member cities participated in seven workshops facilitated by the researchers, with the aim of assessing a specific problem of the care line, which would be used as a tracer of the system integrality. The analysis of the collected empirical material was based on the hermeneutic-dialectic methodology and aimed at the evaluation of the applied participatory methodology, according to its capacity of promoting a process of assessment capable to be used as a support for municipal management. With the participatory approach of evaluation, we were able to promote in-depth discussions with the group, especially related to the construction of integral care and to the inclusion of the user's perspective in decision-making, linked to the search for solution to concrete problems of managers. By joint exploration, the possibility of using data from electronic information systems was opened, as well as information coming directly from the users of the services, to enhance discussions and negotiations between partners. The participants were disbelievers of the replication potential of this type of evaluation without the direct monitoring of the academy, given the difficulty of organizing the process in everyday life, already taken by emergency and political issues. Evaluations of programs and services carried out within the Regional Interagency Commission, starting from the local interest and facilitating the involvement of its members by the use of participatory methodologies, can contribute to the construction of integral care. To the extent that the act of evaluating stay invested with greater significance to the local actors

  2. Plot and Personification in “Tehran-e- Makhuf“

    Directory of Open Access Journals (Sweden)

    M. Pashaei

    Full Text Available Story is one of the important and influential literary genres that deserves to research on its structure and content .By study and analysis of a story, the reader could comprehend the textual messages and change his attitude toward life and different issues .After defining of the social novel, the author tries to analyze plot and personification in novel of “Tehran-e- Makhuf” and respond to the questions on the method employed for plot and personification and analyze it from plot and its components such as conflict, suspension and resolution and compare the differences and similarities between old tales and modern novels.The plot of “Tehran-e- Makhuf” is not so complex due to its subject and content and natural order of events dominates on artificial discipline and it lacks open plot. Of main elements of plot, conflict is more outstanding here. This novel is full of emotional and moral conflicts and there is no similarity with historical novels that describe good and bad conflicts. Cause and effect relationship is main element of plot that shadows on the story events .In “Tehrna-e- Makhuf”, the author tries to violate the principles and cause to imbalance in natural events sequences with discomposing rational and experiential relationship and take action toward artificiality and unnatural suspension. In creating suspension by emphasis on incidences in some extremist cases, Kazemi tries to found the story based on the considerable sequence of events and this conduct reduces quality of the story significantly and leads to imbalance in rational and acceptable discipline.Kazemi employs direct or reporting personification mostly. This novel lacks diversity in personage considerably .All characters speak in similar style and there is no particular speech style. The personification of Kazemi in “Tehran-e-Makhuf” is continuous and interdependent in style of old tales and novel in European account. In some cases, he approaches to story

  3. Contemplation on Plot and Personification in Tehran Makhuf

    Directory of Open Access Journals (Sweden)

    Mirjalil Akrami

    2013-11-01

    Full Text Available Abstract Story is one of the important and influential literary genres that deserves to research on its structure and content .By study and analysis of a story, the reader could comprehend the textual messages and change his attitude toward life and different issues .After defining of the social novel, the author tries to analyze plot and personification in novel of “Tehran-e- Makhuf” and respond to the questions on the method employed for plot and personification and analyze it from plot and its components such as conflict, suspension and resolution and compare the differences and similarities between old tales and modern novels.  The plot of “Tehran-e- Makhuf” is not so complex due to its subject and content and natural order of events dominates on artificial discipline and it lacks open plot. Of main elements of plot, conflict is more outstanding here. This novel is full of emotional and moral conflicts and there is no similarity with historical novels that describe good and bad conflicts. Cause and effect relationship is main element of plot that shadows on the story events .In “Tehrna-e- Makhuf”, the author tries to violate the principles and cause to imbalance in natural events sequences with discomposing rational and experiential relationship and take action toward artificiality and unnatural suspension. In creating suspension by emphasis on incidences in some extremist cases, Kazemi tries to found the story based on the considerable sequence of events and this conduct reduces quality of the story significantly and leads to imbalance in rational and acceptable discipline.  Kazemi employs direct or reporting personification mostly. This novel lacks diversity in personage considerably .All characters speak in similar style and there is no particular speech style. The personification of Kazemi in “Tehran-e-Makhuf” is continuous and interdependent in style of old tales and novel in European account. In some cases, he

  4. Hypothetical Outcome Plots Outperform Error Bars and Violin Plots for Inferences about Reliability of Variable Ordering.

    Directory of Open Access Journals (Sweden)

    Jessica Hullman

    Full Text Available Many visual depictions of probability distributions, such as error bars, are difficult for users to accurately interpret. We present and study an alternative representation, Hypothetical Outcome Plots (HOPs, that animates a finite set of individual draws. In contrast to the statistical background required to interpret many static representations of distributions, HOPs require relatively little background knowledge to interpret. Instead, HOPs enables viewers to infer properties of the distribution using mental processes like counting and integration. We conducted an experiment comparing HOPs to error bars and violin plots. With HOPs, people made much more accurate judgments about plots of two and three quantities. Accuracy was similar with all three representations for most questions about distributions of a single quantity.

  5. The Heuristic Interpretation of Box Plots

    Science.gov (United States)

    Lem, Stephanie; Onghena, Patrick; Verschaffel, Lieven; Van Dooren, Wim

    2013-01-01

    Box plots are frequently used, but are often misinterpreted by students. Especially the area of the box in box plots is often misinterpreted as representing number or proportion of observations, while it actually represents their density. In a first study, reaction time evidence was used to test whether heuristic reasoning underlies this…

  6. System for histogram entry, retrieval, and plotting

    International Nuclear Information System (INIS)

    Kellogg, M.; Gallup, J.M.; Shlaer, S.; Spencer, N.

    1977-10-01

    This manual describes the systems for producing histograms and dot plots that were designed for use in connection with the Q general-purpose data-acquisition system. These systems allow for the creation of histograms; the entry, retrieval, and plotting of data in the form of histograms; and the dynamic display of scatter plots as data are acquired. Although the systems are designed for use with Q, they can also be used as a part of other applications. 3 figures

  7. How to regress and predict in a Bland-Altman plot? Review and contribution based on tolerance intervals and correlated-errors-in-variables models.

    Science.gov (United States)

    Francq, Bernard G; Govaerts, Bernadette

    2016-06-30

    Two main methodologies for assessing equivalence in method-comparison studies are presented separately in the literature. The first one is the well-known and widely applied Bland-Altman approach with its agreement intervals, where two methods are considered interchangeable if their differences are not clinically significant. The second approach is based on errors-in-variables regression in a classical (X,Y) plot and focuses on confidence intervals, whereby two methods are considered equivalent when providing similar measures notwithstanding the random measurement errors. This paper reconciles these two methodologies and shows their similarities and differences using both real data and simulations. A new consistent correlated-errors-in-variables regression is introduced as the errors are shown to be correlated in the Bland-Altman plot. Indeed, the coverage probabilities collapse and the biases soar when this correlation is ignored. Novel tolerance intervals are compared with agreement intervals with or without replicated data, and novel predictive intervals are introduced to predict a single measure in an (X,Y) plot or in a Bland-Atman plot with excellent coverage probabilities. We conclude that the (correlated)-errors-in-variables regressions should not be avoided in method comparison studies, although the Bland-Altman approach is usually applied to avert their complexity. We argue that tolerance or predictive intervals are better alternatives than agreement intervals, and we provide guidelines for practitioners regarding method comparison studies. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  8. Recurrence plots of exchange rates of currencies

    OpenAIRE

    Sparavigna, Amelia Carolina

    2014-01-01

    Used to investigate the presence of distinctive recurrent behaviours in natural processes, the recurrence plots can be applied to the analysis of economic data, and, in particular, to the characterization of exchange rates of currencies too. In this paper, we will show that these plots are able to characterize the periods of oscillation and random walk of currencies and enhance their reply to news and events, by means of texture transitions. The examples of recurrence plots given here are obt...

  9. A stochastic optimal feedforward and feedback control methodology for superagility

    Science.gov (United States)

    Halyo, Nesim; Direskeneli, Haldun; Taylor, Deborah B.

    1992-01-01

    A new control design methodology is developed: Stochastic Optimal Feedforward and Feedback Technology (SOFFT). Traditional design techniques optimize a single cost function (which expresses the design objectives) to obtain both the feedforward and feedback control laws. This approach places conflicting demands on the control law such as fast tracking versus noise atttenuation/disturbance rejection. In the SOFFT approach, two cost functions are defined. The feedforward control law is designed to optimize one cost function, the feedback optimizes the other. By separating the design objectives and decoupling the feedforward and feedback design processes, both objectives can be achieved fully. A new measure of command tracking performance, Z-plots, is also developed. By analyzing these plots at off-nominal conditions, the sensitivity or robustness of the system in tracking commands can be predicted. Z-plots provide an important tool for designing robust control systems. The Variable-Gain SOFFT methodology was used to design a flight control system for the F/A-18 aircraft. It is shown that SOFFT can be used to expand the operating regime and provide greater performance (flying/handling qualities) throughout the extended flight regime. This work was performed under the NASA SBIR program. ICS plans to market the software developed as a new module in its commercial CACSD software package: ACET.

  10. Improving LiDAR Biomass Model Uncertainty through Non-Destructive Allometry and Plot-level 3D Reconstruction with Terrestrial Laser Scanning

    Science.gov (United States)

    Stovall, A. E.; Shugart, H. H., Jr.

    2017-12-01

    Future NASA and ESA satellite missions plan to better quantify global carbon through detailed observations of forest structure, but ultimately rely on uncertain ground measurement approaches for calibration and validation. A significant amount of the uncertainty in estimating plot-level biomass can be attributed to inadequate and unrepresentative allometric relationships used to convert plot-level tree measurements to estimates of aboveground biomass. These allometric equations are known to have high errors and biases, particularly in carbon rich forests because they were calibrated with small and often biased samples of destructively harvested trees. To overcome this issue, a non-destructive methodology for estimating tree and plot-level biomass has been proposed through the use of Terrestrial Laser Scanning (TLS). We investigated the potential for using TLS as a ground validation approach in LiDAR-based biomass mapping though virtual plot-level tree volume reconstruction and biomass estimation. Plot-level biomass estimates were compared on the Virginia-based Smithsonian Conservation Biology Institute's SIGEO forest with full 3D reconstruction, TLS allometry, and Jenkins et al. (2003) allometry. On average, full 3D reconstruction ultimately provided the lowest uncertainty estimate of plot-level biomass (9.6%), followed by TLS allometry (16.9%) and the national equations (20.2%). TLS offered modest improvements to the airborne LiDAR empirical models, reducing RMSE from 16.2% to 14%. Our findings suggest TLS plot acquisitions and non-destructive allometry can play a vital role for reducing uncertainty in calibration and validation data for biomass mapping in the upcoming NASA and ESA missions.

  11. PLOTTAB, Curve and Point Plotting with Error Bars

    International Nuclear Information System (INIS)

    1999-01-01

    1 - Description of program or function: PLOTTAB is designed to plot any combination of continuous curves and/or discrete points (with associated error bars) using user supplied titles and X and Y axis labels and units. If curves are plotted, the first curve may be used as a standard; the data and the ratio of the data to the standard will be plotted. 2 - Method of solution: PLOTTAB: The program has no idea of what data is being plotted and yet by supplying titles, X and Y axis labels and units the user can produce any number of plots with each plot containing almost any combination of curves and points with each plot properly identified. In order to define a continuous curve between tabulated points, this program must know how to interpolate between points. By input the user may specify either the default option of linear x versus linear y interpolation or alternatively log x and/or log Y interpolation. In all cases, regardless of the interpolation specified, the program will always interpolate the data to the plane of the plot (linear or log x and y plane) in order to present the true variation of the data between tabulated points, based on the user specified interpolation law. Tabulated points should be tabulated at a sufficient number of x values to insure that the difference between the specified interpolation and the 'true' variation of a curve between tabulated values is relatively small. 3 - Restrictions on the complexity of the problem: A combination of up to 30 curves and sets of discrete points may appear on each plot. If the user wishes to use this program to compare different sets of data, all of the data must be in the same units

  12. Worm plot to diagnose fit in quantile regression

    NARCIS (Netherlands)

    Buuren, S. van

    2007-01-01

    The worm plot is a series of detrended Q-Q plots, split by covariate levels. The worm plot is a diagnostic tool for visualizing how well a statistical model fits the data, for finding locations at which the fit can be improved, and for comparing the fit of different models. This paper shows how the

  13. Worm plot to diagnose fit in quantile regression

    NARCIS (Netherlands)

    Buuren, S. van

    2007-01-01

    The worm plot is a series of detrended Q-Q plots, split by covariate levels. The worm plot is a diagnostic tool for visualizing how well a statistical model fits the data, for finding locations at which the fit can be improved, and for comparing the fit of different models. This paper shows how

  14. The Shorth Plot

    NARCIS (Netherlands)

    Einmahl, J.H.J.; Gantner, M.; Sawitzki, G.

    2008-01-01

    The shorth plot is a tool to investigate probability mass concentration. It is a graphical representation of the length of the shorth, the shortest interval covering a certain fraction of the distribution, localized by forcing the intervals considered to contain a given point x. It is easy to

  15. Dynamics, aboveground biomass and composition on permanent plots, Tambopata National Reserve. Madre de Dios, Peru

    Directory of Open Access Journals (Sweden)

    Nadir C. Pallqui

    2014-12-01

    Full Text Available In this study we evaluated the floristic composition and changes in stored biomass and dynamics over time in 9 permanent plots monitored by RAINFOR (Amazon Forest Inventory Network and located in the lowland Amazon rainforest of the Tambopata National Reserve. Data were acquired in the field using the standardized methodology of RAINFOR. The biomass was estimated using the equation for tropical moist forests of Chave et al. (2005. Biomass dynamics were analyzed, in three separated periods from 2003 to 2011. 64 families, 219 genera and 531 species were recorded. The tree floristic composition is very similar in all plots except for one swamp plot, although but it is also evident that two slightly different forest communities exist in the rest of landscape, apparently related to the age of the ancient river terraces in the area. Mortality and recruitment of individuals averaged 2.12 ± 0.52% and 1.92 ± 0.49%, respectively. The turnover rate is 2.02% per year. Aboveground biomass stored in these forests averages 296.2 ± 33.9 t ha-1. The biomass dynamics show a total net gain of 1.96, 1.69 and –1.23 t ha-1 for period respectively. Prior to the drought of 2010 a change in biomass was found 1.88 t ha-1 yr-1 and post drought was -0.18 t ha-1 yr-1 on average, though the difference is not significant. Demographic analysis suggests a dynamic equilibrium in the plots. The negative balance of biomass observed for the period 2008 – 2011 may be due to the drought of 2010, in which half of the monitored plots experienced negative net biomass change due to mortality of individuals selectively affecting the floristic composition.

  16. Variability of Measured Runoff and Soil Loss from Field Plots

    Directory of Open Access Journals (Sweden)

    F. Asadzadeh

    2016-02-01

    Full Text Available Introduction: Field plots are widely used in studies related to the measurements of soil loss and modeling of erosion processes. Research efforts are needed to investigate factors affecting the data quality of plots. Spatial scale or size of plots is one of these factors which directly affects measuring runoff and soil loss by means of field plots. The effect of plot size on measured runoff or soil loss from natural plots is known as plot scale effect. On the other hand, variability of runoff and sediment yield from replicated filed plots is a main source of uncertainty in measurement of erosion from plots which should be considered in plot data interpretation processes. Therefore, there is a demand for knowledge of soil erosion processes occurring in plots of different sizes and of factors that determine natural variability, as a basis for obtaining soil loss data of good quality. This study was carried out to investigate the combined effects of these two factors by measurement of runoff and soil loss from replicated plots with different sizes. Materials and Methods: In order to evaluate the variability of runoff and soil loss data seven plots, differing in width and length, were constructed in a uniform slope of 9% at three replicates at Koohin Research Station in Qazvin province. The plots were ploughed up to down slope in September 2011. Each plot was isolated using soil beds with a height of 30 cm, to direct generated surface runoff to the lower part of the plots. Runoff collecting systems composed of gutters, pipes and tankswere installed at the end of each plot. During the two-year study period of 2011-2012, plots were maintained in bare conditions and runoff and soil loss were measured for each single event. Precipitation amounts and characteristics were directly measured by an automatic recording tipping-bucket rain gauge located about 200 m from the experimental plots. The entire runoff volume including eroded sediment was measured on

  17. Genome U-Plot: a whole genome visualization.

    Science.gov (United States)

    Gaitatzes, Athanasios; Johnson, Sarah H; Smadbeck, James B; Vasmatzis, George

    2018-05-15

    The ability to produce and analyze whole genome sequencing (WGS) data from samples with structural variations (SV) generated the need to visualize such abnormalities in simplified plots. Conventional two-dimensional representations of WGS data frequently use either circular or linear layouts. There are several diverse advantages regarding both these representations, but their major disadvantage is that they do not use the two-dimensional space very efficiently. We propose a layout, termed the Genome U-Plot, which spreads the chromosomes on a two-dimensional surface and essentially quadruples the spatial resolution. We present the Genome U-Plot for producing clear and intuitive graphs that allows researchers to generate novel insights and hypotheses by visualizing SVs such as deletions, amplifications, and chromoanagenesis events. The main features of the Genome U-Plot are its layered layout, its high spatial resolution and its improved aesthetic qualities. We compare conventional visualization schemas with the Genome U-Plot using visualization metrics such as number of line crossings and crossing angle resolution measures. Based on our metrics, we improve the readability of the resulting graph by at least 2-fold, making apparent important features and making it easy to identify important genomic changes. A whole genome visualization tool with high spatial resolution and improved aesthetic qualities. An implementation and documentation of the Genome U-Plot is publicly available at https://github.com/gaitat/GenomeUPlot. vasmatzis.george@mayo.edu. Supplementary data are available at Bioinformatics online.

  18. Contemplation on Plot and Personification in Tehran Makhuf

    Directory of Open Access Journals (Sweden)

    Mohammad Pashaei

    2013-10-01

    Full Text Available  Abstract Story is one of the important and influential literary genres that deserves to research on its structure and content .By study and analysis of a story, the reader could comprehend the textual messages and change his attitude toward life and different issues .After defining of the social novel, the author tries to analyze plot and personification in novel of “Tehran-e- Makhuf” and respond to the questions on the method employed for plot and personification and analyze it from plot and its components such as conflict, suspension and resolution and compare the differences and similarities between old tales and modern novels.  The plot of “Tehran-e- Makhuf” is not so complex due to its subject and content and natural order of events dominates on artificial discipline and it lacks open plot. Of main elements of plot, conflict is more outstanding here. This novel is full of emotional and moral conflicts and there is no similarity with historical novels that describe good and bad conflicts. Cause and effect relationship is main element of plot that shadows on the story events .In “Tehrna-e- Makhuf”, the author tries to violate the principles and cause to imbalance in natural events sequences with discomposing rational and experiential relationship and take action toward artificiality and unnatural suspension. In creating suspension by emphasis on incidences in some extremist cases, Kazemi tries to found the story based on the considerable sequence of events and this conduct reduces quality of the story significantly and leads to imbalance in rational and acceptable discipline.  Kazemi employs direct or reporting personification mostly. This novel lacks diversity in personage considerably .All characters speak in similar style and there is no particular speech style. The personification of Kazemi in “Tehran-e-Makhuf” is continuous and interdependent in style of old tales and novel in European

  19. Ethical and methodological issues in qualitative studies involving people with severe and persistent mental illness such as schizophrenia and other psychotic conditions: a critical review.

    Science.gov (United States)

    Carlsson, Ing-Marie; Blomqvist, Marjut; Jormfeldt, Henrika

    2017-01-01

    Undertaking research studies in the field of mental health is essential in mental health nursing. Qualitative research methodologies enable human experiences to become visible and recognize the importance of lived experiences. This paper argues that involving people with schizophrenia in research is critical to promote their health and well-being. The quality of qualitative research needs scrutinizing according to methodological issues such as trustworthiness and ethical standards that are a fundamental part of qualitative research and nursing curricula. The aim of this study was to critically review recent qualitative studies involving people with severe and persistent mental illness such as schizophrenia and other psychotic conditions, regarding descriptions of ethical and methodological issues in data collection and analysis. A search for relevant papers was conducted in three electronic databases, in December 2016. Fifteen qualitative interview studies were included and reviewed regarding methodological issues related to ethics, and data collection and analysis. The results revealed insufficient descriptions of methodology regarding ethical considerations and issues related to recruitment and sampling in qualitative interview studies with individuals with severe mental illness, putting trustworthiness at risk despite detailed descriptions of data analysis. Knowledge from the perspective of individuals with their own experience of mental illness is essential. Issues regarding sampling and trustworthiness in qualitative studies involving people with severe mental illness are vital to counteract the stigmatization of mental illness.

  20. Rainfall-runoff-soil and nutrient loss relationships for plot size areas of bhetagad watershed in Central Himalaya, India

    Science.gov (United States)

    Kothyari, B. P.; Verma, P. K.; Joshi, B. K.; Kothyari, U. C.

    2004-06-01

    The Bhetagad watershed in Kumaon Hills of Central Himalaya represents for hydro-meteorological conditions of the middle mountains over the Hindu Kush Himalayas. This study was conducted to assess the runoff, soil loss and subsequent nutrient losses from different prominent land uses in the Bhetagad watershed of Central Himalayas. Four experimental natural plots each of 20 m length and 5 m width were delineated on four most common land covers viz, pine forests, tea plantation, rainfed agricultural and degraded lands. Monthly values of runoff, soil loss and nutrient loss, for four successive years (1998-2001), from these land uses were quantified following standard methodologies. The annual runoff in these plots ranged between 51 and 3593 m 3/ha while the annual soil loss varied between 0.06 and 5.47 tonnes/ha during the entire study period. The loss of organic matter was found to be maximum in plot having pine forest followed by plot having tea plantation as the land cover. Annual loss of total N (6.24 kg/ha), total P (3.88 kg/ha) and total K (5.98 kg/ha),per unit loss of soil (tonnes/ha), was maximum from the plot having rainfed agricultural crop as the land cover. The loss of total N ranged between 0.30 and 21.27 kg/ha, total P ranged between 0.14 and 9.42 kg/ha, total K ranged from 0.12 to 11.31 kg/ha whereas organic matter loss varied between 3.65 and 255.16 kg/ha, from different experimental plots. The findings will lead towards devising better conservation/management options for mountain land use systems.

  1. Estimation of Missing Observations in Two-Level Split-Plot Designs

    DEFF Research Database (Denmark)

    Almimi, Ashraf A.; Kulahci, Murat; Montgomery, Douglas C.

    2008-01-01

    Inserting estimates for the missing observations from split-plot designs restores their balanced or orthogonal structure and alleviates the difficulties in the statistical analysis. In this article, we extend a method due to Draper and Stoneman to estimate the missing observations from unreplicated...... two-level factorial and fractional factorial split-plot (FSP and FFSP) designs. The missing observations, which can either be from the same whole plot, from different whole plots, or comprise entire whole plots, are estimated by equating to zero a number of specific contrast columns equal...... to the number of the missing observations. These estimates are inserted into the design table and the estimates for the remaining effects (or alias chains of effects as the case with FFSP designs) are plotted on two half-normal plots: one for the whole-plot effects and the other for the subplot effects...

  2. Plot Description (PD)

    Science.gov (United States)

    Robert E. Keane

    2006-01-01

    The Plot Description (PD) form is used to describe general characteristics of the FIREMON macroplot to provide ecological context for data analyses. The PD data characterize the topographical setting, geographic reference point, general plant composition and cover, ground cover, fuels, and soils information. This method provides the general ecological data that can be...

  3. iCanPlot: visual exploration of high-throughput omics data using interactive Canvas plotting.

    Directory of Open Access Journals (Sweden)

    Amit U Sinha

    Full Text Available Increasing use of high throughput genomic scale assays requires effective visualization and analysis techniques to facilitate data interpretation. Moreover, existing tools often require programming skills, which discourages bench scientists from examining their own data. We have created iCanPlot, a compelling platform for visual data exploration based on the latest technologies. Using the recently adopted HTML5 Canvas element, we have developed a highly interactive tool to visualize tabular data and identify interesting patterns in an intuitive fashion without the need of any specialized computing skills. A module for geneset overlap analysis has been implemented on the Google App Engine platform: when the user selects a region of interest in the plot, the genes in the region are analyzed on the fly. The visualization and analysis are amalgamated for a seamless experience. Further, users can easily upload their data for analysis--which also makes it simple to share the analysis with collaborators. We illustrate the power of iCanPlot by showing an example of how it can be used to interpret histone modifications in the context of gene expression.

  4. Next Generation Quality: Assessing the Physician in Clinical History Completeness and Diagnostic Interpretations Using Funnel Plots and Normalized Deviations Plots in 3,854 Prostate Biopsies.

    Science.gov (United States)

    Bonert, Michael; El-Shinnawy, Ihab; Carvalho, Michael; Williams, Phillip; Salama, Samih; Tang, Damu; Kapoor, Anil

    2017-01-01

    Observational data and funnel plots are routinely used outside of pathology to understand trends and improve performance. Extract diagnostic rate (DR) information from free text surgical pathology reports with synoptic elements and assess whether inter-rater variation and clinical history completeness information useful for continuous quality improvement (CQI) can be obtained. All in-house prostate biopsies in a 6-year period at two large teaching hospitals were extracted and then diagnostically categorized using string matching, fuzzy string matching, and hierarchical pruning. DRs were then stratified by the submitting physicians and pathologists. Funnel plots were created to assess for diagnostic bias. 3,854 prostate biopsies were found and all could be diagnostically classified. Two audits involving the review of 700 reports and a comparison of the synoptic elements with the free text interpretations suggest a categorization error rate of 40 cases and together assessed 3,690 biopsies. There was considerable inter-rater variability and a trend toward more World Health Organization/International Society of Urologic Pathology Grade 1 cancers in older pathologists. Normalized deviations plots, constructed using the median DR, and standard error can elucidate associated over- and under-calls for an individual pathologist in relation to their practice group. Clinical history completeness by submitting medical doctor varied significantly (100% to 22%). Free text data analyses have some limitations; however, they could be used for data-driven CQI in anatomical pathology, and could lead to the next generation in quality of care.

  5. Expanded uncertainty associated with determination of isotope enrichment factors: Comparison of two point calculation and Rayleigh-plot.

    Science.gov (United States)

    Julien, Maxime; Gilbert, Alexis; Yamada, Keita; Robins, Richard J; Höhener, Patrick; Yoshida, Naohiro; Remaud, Gérald S

    2018-01-01

    The enrichment factor (ε) is a common way to express Isotope Effects (IEs) associated with a phenomenon. Many studies determine ε using a Rayleigh-plot, which needs multiple data points. More recent articles describe an alternative method using the Rayleigh equation that allows the determination of ε using only one experimental point, but this method is often subject to controversy. However, a calculation method using two points (one experimental point and one at t 0 ) should lead to the same results because the calculation is derived from the Rayleigh equation. But, it is frequently asked "what is the valid domain of use of this two point calculation?" The primary aim of the present work is a systematic comparison of results obtained with these two methodologies and the determination of the conditions required for the valid calculation of ε. In order to evaluate the efficiency of the two approaches, the expanded uncertainty (U) associated with determining ε has been calculated using experimental data from three published articles. The second objective of the present work is to describe how to determine the expanded uncertainty (U) associated with determining ε. Comparative methodologies using both Rayleigh-plot and two point calculation are detailed and it is clearly demonstrated that calculation of ε using a single data point can give the same result as a Rayleigh-plot provided one strict condition is respected: that the experimental value is measured at a small fraction of unreacted substrate (f < 30%). This study will help stable isotope users to present their results in a more rigorous expression: ε ± U and therefore to define better the significance of an experimental results prior interpretation. Capsule: Enrichment factor can be determined through two different methods and the calculation of associated expanded uncertainty allows checking its significance. Copyright © 2017 Elsevier B.V. All rights reserved.

  6. Brains striving for coherence: Long-term cumulative plot formation in the default mode network.

    Science.gov (United States)

    Tylén, K; Christensen, P; Roepstorff, A; Lund, T; Østergaard, S; Donald, M

    2015-11-01

    Many everyday activities, such as engaging in conversation or listening to a story, require us to sustain attention over a prolonged period of time while integrating and synthesizing complex episodic content into a coherent mental model. Humans are remarkably capable of navigating and keeping track of all the parallel social activities of everyday life even when confronted with interruptions or changes in the environment. However, the underlying cognitive and neurocognitive mechanisms of such long-term integration and profiling of information remain a challenge to neuroscience. While brain activity is generally traceable within the short time frame of working memory (milliseconds to seconds), these integrative processes last for minutes, hours or even days. Here we report two experiments on story comprehension. Experiment I establishes a cognitive dissociation between our comprehension of plot and incidental facts in narratives: when episodic material allows for long-term integration in a coherent plot, we recall fewer factual details. However, when plot formation is challenged, we pay more attention to incidental facts. Experiment II investigates the neural underpinnings of plot formation. Results suggest a central role for the brain's default mode network related to comprehension of coherent narratives while incoherent episodes rather activate the frontoparietal control network. Moreover, an analysis of cortical activity as a function of the cumulative integration of narrative material into a coherent story reveals to linear modulations of right hemisphere posterior temporal and parietal regions. Together these findings point to key neural mechanisms involved in the fundamental human capacity for cumulative plot formation. Copyright © 2015 Elsevier Inc. All rights reserved.

  7. PRELIMINARY STUDY OF D0 ---> K PI PI0 DECAYS WITH DALITZ PLOTS

    International Nuclear Information System (INIS)

    2002-01-01

    Particle physicists study the smallest particles and most basic rules of their interactions in humankind's current scope. The Charm Analysis Working Group (CWG) of the BaBar Collaboration studies decays involving the charm quark. They currently study mixing in D decays, an interesting and poorly understood phenomenon in current physics models. We, as part of the CWG, investigated the plausibility of using Dalitz plots and the BaBar analysis framework to study mixing in Wrong Sign (WS) D 0 → Kππ 0 decays. Others in the CWG have studied mixing in the 2-body decay, D 0 → Kπ. The 3-body decay analyzed with the RooFitDalitz analysis package and Dalitz plots provides more information and another way of separating Doubly Cabibbo Suppressed Decays (DCSD) from mixing--which share the same end products. Through doing many simulations, we have demonstrated the usefulness of this approach. We selected D 0 → Kππ 0 events from Simulation Production run No.4 (SP4) and BaBar's run 1 and run 2. We made Dalitz plots with this data. Now that we better understand Dalitz plots and software, we plan to select WS D 0 Kpp0 events and perform rate fits as discussed in BaBar Analysis Document (BAD) No.443, as well as fits for several different decay times and resonances, in order to further distinguish DCSD from mixing

  8. SUPERIMPOSED MESH PLOTTING IN MCNP

    Energy Technology Data Exchange (ETDEWEB)

    J. HENDRICKS

    2001-02-01

    The capability to plot superimposed meshes has been added to MCNP{trademark}. MCNP4C featured a superimposed mesh weight window generator which enabled users to set up geometries without having to subdivide geometric cells for variance reduction. The variance reduction was performed with weight windows on a rectangular or cylindrical mesh superimposed over the physical geometry. Experience with the new capability was favorable but also indicated that a number of enhancements would be very beneficial, particularly a means of visualizing the mesh and its values. The mathematics for plotting the mesh and its values is described here along with a description of other upgrades.

  9. SplicePlot: a utility for visualizing splicing quantitative trait loci.

    Science.gov (United States)

    Wu, Eric; Nance, Tracy; Montgomery, Stephen B

    2014-04-01

    RNA sequencing has provided unprecedented resolution of alternative splicing and splicing quantitative trait loci (sQTL). However, there are few tools available for visualizing the genotype-dependent effects of splicing at a population level. SplicePlot is a simple command line utility that produces intuitive visualization of sQTLs and their effects. SplicePlot takes mapped RNA sequencing reads in BAM format and genotype data in VCF format as input and outputs publication-quality Sashimi plots, hive plots and structure plots, enabling better investigation and understanding of the role of genetics on alternative splicing and transcript structure. Source code and detailed documentation are available at http://montgomerylab.stanford.edu/spliceplot/index.html under Resources and at Github. SplicePlot is implemented in Python and is supported on Linux and Mac OS. A VirtualBox virtual machine running Ubuntu with SplicePlot already installed is also available.

  10. Contemplation on Plot and Personification in Tehran Makhuf

    OpenAIRE

    Mirjalil Akrami; Mohammad Pashaei

    2013-01-01

    Abstract Story is one of the important and influential literary genres that deserves to research on its structure and content .By study and analysis of a story, the reader could comprehend the textual messages and change his attitude toward life and different issues .After defining of the social novel, the author tries to analyze plot and personification in novel of “Tehran-e- Makhuf” and respond to the questions on the method employed for plot and personification and analyze it from plot...

  11. PET kinetic analysis --pitfalls and a solution for the Logan plot.

    Science.gov (United States)

    Kimura, Yuichi; Naganawa, Mika; Shidahara, Miho; Ikoma, Yoko; Watabe, Hiroshi

    2007-01-01

    The Logan plot is a widely used algorithm for the quantitative analysis of neuroreceptors using PET because it is easy to use and simple to implement. The Logan plot is also suitable for receptor imaging because its algorithm is fast. However, use of the Logan plot, and interpretation of the formed receptor images should be regarded with caution, because noise in PET data causes bias in the Logan plot estimates. In this paper, we describe the basic concept of the Logan plot in detail and introduce three algorithms for the Logan plot. By comparing these algorithms, we demonstrate the pitfalls of the Logan plot and discuss the solution.

  12. SCALPLO, Plotting of Flux Output from SCALE Program

    International Nuclear Information System (INIS)

    Hersman, A.; De Leege, P.F.A.; Hoogenboom, J.E.

    1993-01-01

    1 - Description of program or function: SCALPLO is a plot program, designed to plot flux, power and spectrum information. Data exchange between SCALE modules and SCALPLO is via CCCC-interface files. As not all modules can produce these files, there are special routines supplied with SCALPLO that can produce CCCC-like files. These routines can be included in the code and for XSDRPM, CITATION, ANISN and DOT, the place to include these routines is supplied. 2 - Method of solution: SCALPLO consists of two sections. Firstly the pre-processor, which selects and reads the required data. Secondly the plot section which produces the plot on the selected output device. 3 - Restrictions on the complexity of the problem: SCALPLO requires DISSPLA version 11.0 or higher. The choice of output device depends on the devices installed

  13. A drawback and an improvement of the classical Weibull probability plot

    International Nuclear Information System (INIS)

    Jiang, R.

    2014-01-01

    The classical Weibull Probability Paper (WPP) plot has been widely used to identify a model for fitting a given dataset. It is based on a match between the WPP plots of the model and data in shape. This paper carries out an analysis for the Weibull transformations that create the WPP plot and shows that the shape of the WPP plot of the data randomly generated from a distribution model can be significantly different from the shape of the WPP plot of the model due to the high non-linearity of the Weibull transformations. As such, choosing model based on the shape of the WPP plot of data can be unreliable. A cdf-based weighted least squares method is proposed to improve the parameter estimation accuracy; and an improved WPP plot is suggested to avoid the drawback of the classical WPP plot. The appropriateness and usefulness of the proposed estimation method and probability plot are illustrated by simulation and real-world examples

  14. Development of TRatioPlot in ROOT

    CERN Document Server

    Gessinger-Befurt, Paul

    2016-01-01

    The ROOT data analysis and visualization framework is a software package which is widely used in physics, especially in high energy physics. A common visualization which has so far been lacking a direct implementation is the ratio plot, as well as a few similar types of plots. The scope and goal of the summer student project at CERN was to implement a class in ROOT itself, that can take care of the most common types of calculations, and produces high quality visuals.

  15. Digital data collection in forest dynamics plots

    Science.gov (United States)

    Faith Inman-Narahari; Christian Giardina; Rebecca Ostertag; Susan Cordell; Lawren Sack

    2010-01-01

    Summary 1. Computers are widely used in all aspects of research but their application to in-field data collection for forest plots has rarely been evaluated. 2. We developed digital data collection methods using ESRI mapping software and ruggedized field computers to map and measure ~30 000 trees in two 4-ha forest dynamics plots in wet and dry...

  16. Lean Customer Involvement : A Multiple Case Study on the Effects of Kanban on Customer Involvement

    OpenAIRE

    Lundheim, Henning

    2012-01-01

    Customer involvement is an important, but challenging part of software development. Delays and failures can often be attributed to a lack of customer involvement. Different development methodologies provide different strategies for customer involvement, all with their own challenges. Kanban is a new development methodology quickly gaining popularity in the software development community. This thesis aims to answer the question: How does Kanban influence customer involvement? The main prob...

  17. Longleaf pine regeneration following Hurricane Ivan utilizing the RLGS plots

    Science.gov (United States)

    John C. Gilbert; John S. Kush

    2013-01-01

    On September 16, 2004, Hurricane Ivan hit the Alabama coast and severely impacted numerous plots in the U.S. Forest Service’s Regional Longleaf Growth Study (RLGS). The Escambia Experimental Forest (EEF) has 201 of the 325 RLGS plots. Nearly one-third of the EEF was impacted. Nine plots with pole-sized trees were entirely lost. Another 54 plots had some type of damage...

  18. Next generation quality: Assessing the physician in clinical history completeness and diagnostic interpretations using funnel plots and normalized deviations plots in 3,854 prostate biopsies

    Directory of Open Access Journals (Sweden)

    Michael Bonert

    2017-01-01

    Full Text Available Background: Observational data and funnel plots are routinely used outside of pathology to understand trends and improve performance. Objective: Extract diagnostic rate (DR information from free text surgical pathology reports with synoptic elements and assess whether inter-rater variation and clinical history completeness information useful for continuous quality improvement (CQI can be obtained. Methods: All in-house prostate biopsies in a 6-year period at two large teaching hospitals were extracted and then diagnostically categorized using string matching, fuzzy string matching, and hierarchical pruning. DRs were then stratified by the submitting physicians and pathologists. Funnel plots were created to assess for diagnostic bias. Results: 3,854 prostate biopsies were found and all could be diagnostically classified. Two audits involving the review of 700 reports and a comparison of the synoptic elements with the free text interpretations suggest a categorization error rate of 40 cases and together assessed 3,690 biopsies. There was considerable inter-rater variability and a trend toward more World Health Organization/International Society of Urologic Pathology Grade 1 cancers in older pathologists. Normalized deviations plots, constructed using the median DR, and standard error can elucidate associated over- and under-calls for an individual pathologist in relation to their practice group. Clinical history completeness by submitting medical doctor varied significantly (100% to 22%. Conclusion: Free text data analyses have some limitations; however, they could be used for data-driven CQI in anatomical pathology, and could lead to the next generation in quality of care.

  19. SEGY to ASCII: Conversion and Plotting Program

    Science.gov (United States)

    Goldman, Mark R.

    1999-01-01

    This report documents a computer program to convert standard 4 byte, IBM floating point SEGY files to ASCII xyz format. The program then optionally plots the seismic data using the GMT plotting package. The material for this publication is contained in a standard tar file (of99-126.tar) that is uncompressed and 726 K in size. It can be downloaded by any Unix machine. Move the tar file to the directory you wish to use it in, then type 'tar xvf of99-126.tar' The archive files (and diskette) contain a NOTE file, a README file, a version-history file, source code, a makefile for easy compilation, and an ASCII version of the documentation. The archive files (and diskette) also contain example test files, including a typical SEGY file along with the resulting ASCII xyz and postscript files. Requirements for compiling the source code into an executable are a C++ compiler. The program has been successfully compiled using Gnu's g++ version 2.8.1, and use of other compilers may require modifications to the existing source code. The g++ compiler is a free, high quality C++ compiler and may be downloaded from the ftp site: ftp://ftp.gnu.org/gnu Requirements for plotting the seismic data is the existence of the GMT plotting package. The GMT plotting package may be downloaded from the web site: http://www.soest.hawaii.edu/gmt/

  20. Potato production on private plots contaminated by radionuclides

    International Nuclear Information System (INIS)

    Bogdevitch, I.; Tarasiuk, S.

    2004-01-01

    Potatoes is one of the basis food products of man diet, especially in country area. Recent research has shown that 137 Cs content in potato tubers does not exceed the permissible level at the potato growing on radioactive contaminated land in Belarus. However up to 240-300 kg of potatoes is consumed per man during year and potato yield determines significant share of the internal dose of radiation. Moreover, extra potato yield sold on market is forming the essential part of the rural family budget. Therefore the reducing of 137 Cs content in potatoes and increasing of potato yield could be allowed to improve of quality life of rural inhabitants on contaminated areas. The application of protection measures on private plots are restricted by lack of the knowledge and financial deficit. The involvement of rural inhabitants in processes of self-rehabilitation and self-development could be a way to improve the quality life on radioactive contaminated territory There is strong motivation for inhabitants to increase the yield and to reduce the radionuclide concentration in potatoes. How to develop the conditions for the sustainable potato production by private producers on affected land? There are several factors to consider. Firstly, the rural inhabitants should be actively involved as initiators to improve their quality life. Secondly, the potato technology should be adopted to the local territory and tested by producers on radiological and economic efficiency. Thirdly, the common village initiatives should be developed for supplying by new varieties of seeds and fertilizers, selling of yield, consulting, crediting etc. The step-by-step solution of described strategy could allow improving and stabilizing the potato production by rural community. The training of rural people as an initial step was realized to transfer to the inhabitants the practical skills that can be used in their day-to-day life within framework of 'ETHOS-II' project. The experimental potato

  1. True versus perturbed forest inventory plot locations for modeling: a simulation study

    Science.gov (United States)

    John W. Coulston; Kurt H. Riitters; Ronald E. McRoberts; William D. Smith

    2006-01-01

    USDA Forest Service Forest Inventory and Analysis plot information is widely used for timber inventories, forest health assessments, and environmental risk analyses. With few exceptions, true plot locations are not revealed; the plot coordinates are manipulated to obscure the location of field plots and thereby preserve plot integrity. The influence of perturbed plot...

  2. FLOWCHART; a computer program for plotting flowcharts

    Science.gov (United States)

    Bender, Bernice

    1982-01-01

    The computer program FLOWCHART can be used to very quickly and easily produce flowcharts of high quality for publication. FLOWCHART centers each element or block of text that it processes on one of a set of (imaginary) vertical lines. It can enclose a text block in a rectangle, circle or other selected figure. It can draw a 'line connecting the midpoint of any side of any figure with the midpoint of any side of any other figure and insert an arrow pointing in the direction of flow. It can write 'yes' or 'no' next to the line joining two figures. FLOWCHART creates flowcharts using some basic plotting subroutine* which permit plots to be generated interactively and inspected on a Tektronix compatible graphics screen or plotted in a deferred mode on a Houston Instruments 42' pen plotter. The size of the plot, character set and character height in inches are inputs to the program. Plots generated using the pen plotter can be up to 42' high--the larger size plots being directly usable as visual aids in a talk. FLOWCHART centers each block of text on an imaginary column line. (The number of columns and column width are specified as input.) The midpoint of the longest line of text within the block is defined to be the center of the block and is placed on the column line. The spacing of individual words within the block is not altered when the block is positioned. The program writes the first block of text in a designated column and continues placing each subsequent block below the previous block in the same column. A block of text may be placed in a different column by specifying the number of the column and an earlier block of text with which the new block is to be aligned. If block zero is given as the earlier block, the new text is placed in the new column continuing down the page below the previous block. Optionally a column and number of inches from the top of the page may be given for positioning the next block of text. The program will normally draw one of five

  3. MMS control system analysis using automated root-locus plot generation

    International Nuclear Information System (INIS)

    Hefler, J.W.

    1987-01-01

    Use of the Modular Modeling System (MMS) for control systems improvement has been impeded by the need to plot eigenvalues manually. This problem has been solved by an automatic eigenvalue plotting routine. A practical procedure for control systems analysis based upon automatically generated root-locus plots has been developed using the Advanced Continuous Simulation Language (ACSL)-based version of the Modular Modeling System. Examples are given of typical ACSL run-time statements. Actual root-locus and time history plots are shown for simple models (4 state variables). More complex models are discussed. The plots show the control systems response before and after the determination of tuning parameters using the methods described

  4. Air Data - Tile Plot

    Science.gov (United States)

    This tool plots daily AQI values for a specific location and time period. Each square or “tile” represents one day of the year and is color-coded based on the AQI level for that day. The legend tallies the number of days in each AQI category.

  5. Methodology to measure strains at high temperatures using electrical strain gages with free filaments

    International Nuclear Information System (INIS)

    Atanazio Filho, Nelson N.; Gomes, Paulo T. Vida; Scaldaferri, Denis H.B.; Silva, Luiz L. da; Rabello, Emerson G.; Mansur, Tanius R.

    2013-01-01

    An experimental methodology used for strains measuring at high temperatures is show in this work. In order to do the measurements, it was used electric strain gages with loose filaments attached to a stainless steel 304 beam with specific cements. The beam has triangular shape and a constant thickness, so the strain is the same along its length. Unless the beam surface be carefully prepared, the strain gage attachment is not efficient. The showed results are for temperatures ranging from 20 deg C to 300 deg C, but the experimental methodology could be used to measure strains at a temperature up to 900 deg C. Analytical calculations based on solid mechanics were used to verify the strain gage electrical installation and the measured strains. At a first moment, beam deformations as a temperature function were plotted. After that, beam deformations with different weighs were plotted as a temperature function. The results shown allowed concluding that the experimental methodology is trustable to measure strains at temperatures up to 300 deg C. (author)

  6. Split-Plot Designs with Mirror Image Pairs as Subplots

    DEFF Research Database (Denmark)

    Tyssedal, John; Kulahci, Murat; Bisgaard, Soren

    2011-01-01

    In this article we investigate two-level split-plot designs where the sub-plots consist of only two mirror image trials. Assuming third and higher order interactions negligible, we show that these designs divide the estimated effects into two orthogonal sub-spaces, separating sub-plot main effects...... appealing with effects of major interest free from full aliasing assuming that 3rd and higher order interactions are negligible....

  7. ARBRE monitoring - ecology of short rotation coppice. Four year study involving wildlife monitoring of commercial SCR plantations planted on arable land and arable control plots

    Energy Technology Data Exchange (ETDEWEB)

    Cunningham, M.D.; Bishop, J.D.; McKay, H.V.; Sage, R.B.

    2004-07-01

    This report summarises the findings of the UK Department of Trade and Industry (DTI) funded project monitoring wildlife within and around a number of commercially managed Short Rotation Coppice (SRC) plantations aimed at using the information gathered to assess the ecological impact of SRC plantations on the wildlife in the area. The background to the study is traced, and details are given of the monitoring programme examining the distribution of flora and fauna within the plantations, and the monitoring of birds, plants, insects and butterflies. The greater diversity of wildlife and plants in the SRC plots, the higher densities of birds, and the increasing number of butterfly species are discussed along with the increased mean number of invertebrate orders with subsequent growth of willow coppices, and the habitats at the edges of the plots and at headlands designed for access to machinery within the plots.

  8. PLOT3D Export Tool for Tecplot

    Science.gov (United States)

    Alter, Stephen

    2010-01-01

    The PLOT3D export tool for Tecplot solves the problem of modified data being impossible to output for use by another computational science solver. The PLOT3D Exporter add-on enables the use of the most commonly available visualization tools to engineers for output of a standard format. The exportation of PLOT3D data from Tecplot has far reaching effects because it allows for grid and solution manipulation within a graphical user interface (GUI) that is easily customized with macro language-based and user-developed GUIs. The add-on also enables the use of Tecplot as an interpolation tool for solution conversion between different grids of different types. This one add-on enhances the functionality of Tecplot so significantly, it offers the ability to incorporate Tecplot into a general suite of tools for computational science applications as a 3D graphics engine for visualization of all data. Within the PLOT3D Export Add-on are several functions that enhance the operations and effectiveness of the add-on. Unlike Tecplot output functions, the PLOT3D Export Add-on enables the use of the zone selection dialog in Tecplot to choose which zones are to be written by offering three distinct options - output of active, inactive, or all zones (grid blocks). As the user modifies the zones to output with the zone selection dialog, the zones to be written are similarly updated. This enables the use of Tecplot to create multiple configurations of a geometry being analyzed. For example, if an aircraft is loaded with multiple deflections of flaps, by activating and deactivating different zones for a specific flap setting, new specific configurations of that aircraft can be easily generated by only writing out specific zones. Thus, if ten flap settings are loaded into Tecplot, the PLOT3D Export software can output ten different configurations, one for each flap setting.

  9. PETRO.CALC.PLOT, Microsoft Excel macros to aid petrologic interpretation

    Science.gov (United States)

    Sidder, G.B.

    1994-01-01

    PETRO.CALC.PLOT is a package of macros which normalizes whole-rock oxide data to 100%, calculates the cation percentages and molecular proportions used for normative mineral calculations, computes the apices for ternary diagrams, determines sums and ratios of specific elements of petrologic interest, and plots 33 X-Y graphs and five ternary diagrams. PETRO.CALC.PLOT also may be used to create other diagrams as desired by the user. The macros run in Microsoft Excel 3.0 and 4.0 for Macintosh computers and in Microsoft Excel 3.0 and 4.0 for Windows. Macros provided in PETRO.CALC.PLOT minimize repetition and time required to recalculate and plot whole-rock oxide data for petrologic analysis. ?? 1994.

  10. Plotting of bathythermograph transect data on a printer

    Science.gov (United States)

    Reynolds, James B.; McLain, Douglas R.

    1971-01-01

    A program for plotting bathythermograph transect data on a computer (IBM 1130) printer is available from the Great Lakes Fishery Laboratory. Temperature values are printed in positions proportional to their depths and distances from shore. Contour lines are drawn manually through the plotted points.

  11. Privatization of Land Plot Under Integral Real Estate Complex

    Directory of Open Access Journals (Sweden)

    Maruchek A. A.

    2014-10-01

    Full Text Available The article deals with the questions concerning the privatization of a land plot under integral real estate complex. The authors come to conclusion that a number of legislation norms relating to privatization of a land plot do not take into account the construction of an integral real estate complex that could cause some problems in the realization of the right to privatization of the land plot

  12. Plotting and Analyzing Data Trends in Ternary Diagrams Made Easy

    Science.gov (United States)

    John, Cédric M.

    2004-04-01

    Ternary plots are used in many fields of science to characterize a system based on three components. Triangular plotting is thus useful to a broad audience in the Earth sciences and beyond. Unfortunately, it is typically the most expensive commercial software packages that offer the option to plot data in ternary diagrams, and they lack features that are paramount to the geosciences, such as the ability to plot data directly into a standardized diagram and the possibility to analyze temporal and stratigraphic trends within this diagram. To address these issues, δPlot was developed with a strong emphasis on ease of use, community orientation, and availability free of charges. This ``freeware'' supports a fully graphical user interface where data can be imported as text files, or by copying and pasting. A plot is automatically generated, and any standard diagram can be selected for plotting in the background using a simple pull-down menu. Standard diagrams are stored in an external database of PDF files that currently holds some 30 diagrams that deal with different fields of the Earth sciences. Using any drawing software supporting PDF, one can easily produce new standard diagrams to be used with δPlot by simply adding them to the library folder. An independent column of values, commonly stratigraphic depths or ages, can be used to sort the data sets.

  13. Slope Stability of Geosynthetic Clay Liner Test Plots

    Science.gov (United States)

    Fourteen full-scale field test plots containing five types of geosynthetic clay liners (GCLs) were constructed on 2H:IV and 3H:IV slopes for the purpose of assessing slope stability. The test plots were designed to simulate typical final cover systems for landfill. Slides occurr...

  14. Chain Plot: A Tool for Exploiting Bivariate Temporal Structures

    OpenAIRE

    Taylor, CC; Zempeni, A

    2004-01-01

    In this paper we present a graphical tool useful for visualizing the cyclic behaviour of bivariate time series. We investigate its properties and link it to the asymmetry of the two variables concerned. We also suggest adding approximate confidence bounds to the points on the plot and investigate the effect of lagging to the chain plot. We conclude our paper by some standard Fourier analysis, relating and comparing this to the chain plot.

  15. 9 CFR 108.2 - Plot plans, blueprints, and legends required.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Plot plans, blueprints, and legends... REQUIREMENTS FOR LICENSED ESTABLISHMENTS § 108.2 Plot plans, blueprints, and legends required. Each applicant for an establishment license shall prepare a plot plan showing all buildings for each particular land...

  16. User manual for two simple postscript output FORTRAN plotting routines

    Science.gov (United States)

    Nguyen, T. X.

    1991-01-01

    Graphics is one of the important tools in engineering analysis and design. However, plotting routines that generate output on high quality laser printers normally come in graphics packages, which tend to be expensive and system dependent. These factors become important for small computer systems or desktop computers, especially when only some form of a simple plotting routine is sufficient. With the Postscript language becoming popular, there are more and more Postscript laser printers now available. Simple, versatile, low cost plotting routines that can generate output on high quality laser printers are needed and standard FORTRAN language plotting routines using output in Postscript language seems logical. The purpose here is to explain two simple FORTRAN plotting routines that generate output in Postscript language.

  17. Multilocational evaluation of white yam genotypes using GGE bi-plot ...

    African Journals Online (AJOL)

    Five new white yam genotypes were evaluated in different locations of major yam producing areas; Umudike, Nsukka, Ubiaja, Abuja and Katsina-Ala, to test the performance and stability of these genotypes across the environments using GGE bi-plot software. The GGE bi-plot generated several graphic bi-plots which ...

  18. On-plot drinking water supplies and health: A systematic review.

    Science.gov (United States)

    Overbo, Alycia; Williams, Ashley R; Evans, Barbara; Hunter, Paul R; Bartram, Jamie

    2016-07-01

    Many studies have found that household access to water supplies near or within the household plot can reduce the probability of diarrhea, trachoma, and other water-related diseases, and it is generally accepted that on-plot water supplies produce health benefits for households. However, the body of research literature has not been analyzed to weigh the evidence supporting this. A systematic review was conducted to investigate the impacts of on-plot water supplies on diarrhea, trachoma, child growth, and water-related diseases, to further examine the relationship between household health and distance to water source and to assess whether on-plot water supplies generate health gains for households. Studies provide evidence that households with on-plot water supplies experience fewer diarrheal and helminth infections and greater child height. Findings suggest that water-washed (hygiene associated) diseases are more strongly impacted by on-plot water access than waterborne diseases. Few studies analyzed the effects of on-plot water access on quantity of domestic water used, hygiene behavior, and use of multiple water sources, and the lack of evidence for these relationships reveals an important gap in current literature. The review findings indicate that on-plot water access is a useful health indicator and benchmark for the progressive realization of the Sustainable Development Goal target of universal safe water access as well as the human right to safe water. Copyright © 2016 Elsevier GmbH. All rights reserved.

  19. 6th International Symposium on Recurrence Plots

    CERN Document Server

    Jr, Jr; Ioana, Cornel; Marwan, Norbert

    2016-01-01

    The chapters in this book originate from the research work and contributions presented at the Sixth International Symposium on Recurrence Plots held in Grenoble, France in June 2015. Scientists from numerous disciplines gathered to exchange knowledge on recent applications and developments in recurrence plots and recurrence quantification analysis. This meeting was remarkable because of the obvious expansion of recurrence strategies (theory) and applications (practice) into ever-broadening fields of science. It discusses real-world systems from various fields, including mathematics, strange attractors, applied physics, physiology, medicine, environmental and earth sciences, as well as psychology and linguistics. Even readers not actively researching any of these particular systems will benefit from discovering how other scientists are finding practical non-linear solutions to specific problems. The book is of interest to an interdisciplinary audience of recurrence plot users and researchers interested in time...

  20. arXiv Laura++ : a Dalitz plot fitter

    CERN Document Server

    Back, John; Harrison, Paul; Latham, Thomas; O'Hanlon, Daniel; Qian, Wenbin; del Amo Sanchez, Pablo; Craik, Daniel; Ilic, Jelena; Otalora Goicochea, Juan; Puccio, Eugenia; Silva Coutinho, Rafael; Whitehead, Mark

    The Dalitz plot analysis technique has become an increasingly important method in heavy flavour physics. The Laura++ fitter has been developed as a flexible tool that can be used for Dalitz plot analyses in different experimental environments. Explicitly designed for three-body decays of heavy-flavoured mesons to spinless final state particles, it is optimised in order to describe all possible resonant or nonresonant contributions, and to accommodate possible CP violation effects.

  1. THERAPIE - THErmix-RAps-Plot-InterfacE. A graphic software for representation of THERMIX-2D results with the interactive plot program RAPS

    International Nuclear Information System (INIS)

    Duensing, P.; Jahn, W.; Rehm, W.

    1986-09-01

    The performance of safety analyses for gas-cooled high temperature reactor power plants requires efficient plot codes for the evaluation and representation of computer results. The report describes the coupling between the thermodynamic simulation code THERMIX and the graphic plot code RAPS via the interface program THERAPIE. Especially the structure and the handling of the interface program are explained as well as the dialogue with the plot code. Further options of the colour graphic system are demonstrated for the representation of temperature distributions in components of HTR concepts (HTR-500). (orig.) [de

  2. In Vitro Optimization of Enzymes Involved in Precorrin-2 Synthesis Using Response Surface Methodology.

    Science.gov (United States)

    Fang, Huan; Dong, Huina; Cai, Tao; Zheng, Ping; Li, Haixing; Zhang, Dawei; Sun, Jibin

    2016-01-01

    In order to maximize the production of biologically-derived chemicals, kinetic analyses are first necessary for predicting the role of enzyme components and coordinating enzymes in the same reaction system. Precorrin-2 is a key precursor of cobalamin and siroheme synthesis. In this study, we sought to optimize the concentrations of several molecules involved in precorrin-2 synthesis in vitro: porphobilinogen synthase (PBGS), porphobilinogen deaminase (PBGD), uroporphyrinogen III synthase (UROS), and S-adenosyl-l-methionine-dependent urogen III methyltransferase (SUMT). Response surface methodology was applied to develop a kinetic model designed to maximize precorrin-2 productivity. The optimal molar ratios of PBGS, PBGD, UROS, and SUMT were found to be approximately 1:7:7:34, respectively. Maximum precorrin-2 production was achieved at 0.1966 ± 0.0028 μM/min, agreeing with the kinetic model's predicted value of 0.1950 μM/min. The optimal concentrations of the cofactor S-adenosyl-L-methionine (SAM) and substrate 5-aminolevulinic acid (ALA) were also determined to be 200 μM and 5 mM, respectively, in a tandem-enzyme assay. By optimizing the relative concentrations of these enzymes, we were able to minimize the effects of substrate inhibition and feedback inhibition by S-adenosylhomocysteine on SUMT and thereby increase the production of precorrin-2 by approximately five-fold. These results demonstrate the effectiveness of kinetic modeling via response surface methodology for maximizing the production of biologically-derived chemicals.

  3. Iron status determination in pregnancy using the Thomas plot.

    Science.gov (United States)

    Weyers, R; Coetzee, M J; Nel, M

    2016-04-01

    Physiological changes during pregnancy affect routine tests for iron deficiency. The reticulocyte haemoglobin equivalent (RET-He) and serum-soluble transferrin receptor (sTfR) assay are newer diagnostic parameters for the detection of iron deficiency, combined in the Thomas diagnostic plot. We used this plot to determine the iron status of pregnant women presenting for their first visit to an antenatal clinic in Bloemfontein, South Africa. Routine laboratory tests (serum ferritin, full blood count and C-reactive protein) and RET-He and sTfR were performed. The iron status was determined using the Thomas plot. For this study, 103 pregnant women were recruited. According to the Thomas plot, 72.8% of the participants had normal iron stores and erythropoiesis. Iron-deficient erythropoiesis was detected in 12.6%. A third of participants were anaemic. Serum ferritin showed excellent sensitivity but poor specificity for detecting depleted iron stores. HIV status had no influence on the iron status of the participants. Our findings reiterate that causes other than iron deficiency should be considered in anaemic individuals. When compared with the Thomas plot, a low serum ferritin is a sensitive but nonspecific indicator of iron deficiency. The Thomas plot may provide useful information to identify pregnant individuals in whom haematologic parameters indicate limited iron availability for erythropoiesis. © 2015 John Wiley & Sons Ltd.

  4. Myth Structure and Media Fiction Plot: An Exploration.

    Science.gov (United States)

    Harless, James D.

    Based on the general research of Joseph Campbell in adventure plots from mythology, the author explores the simplified monomyth plots currently in frequent use in mass media programing. The close relationship of media fiction to mythic stories is established through the analysis of more than 25 stories resulting from media broadcasting. The media…

  5. Potato production on private plots contaminated by radionuclides

    Energy Technology Data Exchange (ETDEWEB)

    Bogdevitch, I.; Tarasiuk, S. [Belarusian Research Institute for Soil Science and Agrochemistry (BRISSA), Minsk (Belarus)

    2004-07-01

    Potatoes is one of the basis food products of man diet, especially in country area. Recent research has shown that {sup 137}Cs content in potato tubers does not exceed the permissible level at the potato growing on radioactive contaminated land in Belarus. However up to 240-300 kg of potatoes is consumed per man during year and potato yield determines significant share of the internal dose of radiation. Moreover, extra potato yield sold on market is forming the essential part of the rural family budget. Therefore the reducing of {sup 137}Cs content in potatoes and increasing of potato yield could be allowed to improve of quality life of rural inhabitants on contaminated areas. The application of protection measures on private plots are restricted by lack of the knowledge and financial deficit. The involvement of rural inhabitants in processes of self-rehabilitation and self-development could be a way to improve the quality life on radioactive contaminated territory There is strong motivation for inhabitants to increase the yield and to reduce the radionuclide concentration in potatoes. How to develop the conditions for the sustainable potato production by private producers on affected land? There are several factors to consider. Firstly, the rural inhabitants should be actively involved as initiators to improve their quality life. Secondly, the potato technology should be adopted to the local territory and tested by producers on radiological and economic efficiency. Thirdly, the common village initiatives should be developed for supplying by new varieties of seeds and fertilizers, selling of yield, consulting, crediting etc. The step-by-step solution of described strategy could allow improving and stabilizing the potato production by rural community. The training of rural people as an initial step was realized to transfer to the inhabitants the practical skills that can be used in their day-to-day life within framework of 'ETHOS-II' project. The

  6. Multiple plots in R

    DEFF Research Database (Denmark)

    Edwards, Stefan McKinnon

    2012-01-01

    In this chapter I will investigate how to combine multiple plots into a single. The scenario is a dataset of a series of measurements, on three samples in three situations. There are many ways we can display this, e.g. 3d graphs or faceting. 3d graphs are not good for displaying static data so we...

  7. [Comparative quality measurements part 3: funnel plots].

    Science.gov (United States)

    Kottner, Jan; Lahmann, Nils

    2014-02-01

    Comparative quality measurements between organisations or institutions are common. Quality measures need to be standardised and risk adjusted. Random error must also be taken adequately into account. Rankings without consideration of the precision lead to flawed interpretations and enhances "gaming". Application of confidence intervals is one possibility to take chance variation into account. Funnel plots are modified control charts based on Statistical Process Control (SPC) theory. The quality measures are plotted against their sample size. Warning and control limits that are 2 or 3 standard deviations from the center line are added. With increasing group size the precision increases and so the control limits are forming a funnel. Data points within the control limits are considered to show common cause variation; data points outside special cause variation without the focus of spurious rankings. Funnel plots offer data based information about how to evaluate institutional performance within quality management contexts.

  8. Surveillance of Site A and Plot M

    International Nuclear Information System (INIS)

    Golchert, N.W.

    1993-05-01

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for CY 1992 are presented. The surveillance program is the ongoing remedial action that resulted from the 1976--1978 radiological characterization of the site. That study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand-pumped picnic wells. The current program consists of sample collection and analysis of air, surface and subsurface water, and bottom sediment. The results of the analyses are used to (1) determine the migration pathway of water from the burial ground (Plot M) to the hand-pumped picnic wells, (2) establish if buried radionuclides other than hydrogen-3 have migrated, and (3) generally characterize the radiological environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Tritiated water continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. For many years it was the only radionuclide found to have migrated in measurable quantities. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The available data does not allow a firm conclusion as to whether the presence of this nuclide represents recent migration or movement that may have occurred before Plot M was capped. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity

  9. Surveillance of Site A and Plot M

    International Nuclear Information System (INIS)

    Golchert, N.W.

    1991-05-01

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for CY 1990 are presented. The surveillance program is the ongoing remedial action that resulted from the 1976-1978 radiological characterization of the site. That study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand-pumped picnic wells. The current program consists of sample collection and analysis of air, surface and subsurface water, and bottom sediment. The results of the analyses are used to determine the migration pathway of water from the burial ground (plot M) to the hand-pumped picnic wells, establish if buries radionuclides other than hydrogen-3 have migrated, and generally characterize the radiological environment of the area. Tritiated water continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The results of the surveillance program continues to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site or those living in the vicinity. 20 refs., 7 figs., 15 tabs

  10. The 2002 RPA Plot Summary database users manual

    Science.gov (United States)

    Patrick D. Miles; John S. Vissage; W. Brad Smith

    2004-01-01

    Describes the structure of the RPA 2002 Plot Summary database and provides information on generating estimates of forest statistics from these data. The RPA 2002 Plot Summary database provides a consistent framework for storing forest inventory data across all ownerships across the entire United States. The data represents the best available data as of October 2001....

  11. Online plot services for paleomagnetism and rock magnetism

    Science.gov (United States)

    Hatakeyama, T.

    2017-12-01

    In paleomagnetism and rock magnetism, a lot of types of original plots are used for obtained data from measurements. Many researchers in paleomagnetism often use not only general-purpose plotting programs such as Microsoft Excel but also single-purpose tools. A large benefit of using the latter tools is that we can make a beautiful figure for our own data. However, those programs require specific environment for their operation such as type of hardware and platform, type of operation system and its version, libraries for execution and so on. Therefore, it is difficult to share the result and graphics among the collaborators who use different environments on their PCs. Thus, one of the best solution is likely a program operated on popular environment. The most popular is web environment as we all know. Almost all current operating systems have web browsers as standard and all people use them regularly. Now we provide a web-based service plotting paleomagnetic results easily.We develop original programs with a command-line user interface (non-GUI), and we prepared web pages for input of the simple measured data and options and a wrapper script which transfers the entered values to the program. The results, analyzed values and plotted graphs from the program are shown in the HTML page and downloadable. Our plot services are provided in http://mage-p.org/mageplot/. In this talk, we introduce our program and service and discuss the philosophy and efficiency of these services.

  12. PRP: a FORTRAN IV interactive plotting program

    Science.gov (United States)

    Andrew, A. S.; Linde, J.

    A computer program, PRP, has been designed to plot any arithmetic combination selected from a set of major and trace element data on a y- x graph. y and x are defined and entered as a program string (y, x) which is interpreted sequentially. Operators ( +, -, ∗, /, ( unary) , square root, log 10, In c, antilog 10, exponential, integer, absolute value, (,),,) and integer or real numbers may be included. Axis lengths and scales are determined by the user. Five different plotting symbols are available.

  13. Transport of cyazofamid and kresoxim methyl in runoff at the plot and catchment scales

    Science.gov (United States)

    Lefrancq, Marie; Joaquín García Verdú, Antonio; Maillard, Elodie; Imfeld, Gwenaël; Payraudeau, Sylvain

    2013-04-01

    Surface runoff and erosion during the course of rainfall events represent major processes of pesticides transport from agricultural land to aquatic ecosystem. In general, field and catchment studies on pesticide transfer are carried out separately. A study at both scales may enable to improve the understanding of scale effects on processes involved in pesticides transport and to give clues on the source areas within an agricultural catchment. In this study, the transport in runoff of two widely used fungicides, i.e. kresoxim methyl (KM) and cyazofamid (CY) was assessed in a 43 ha vineyard catchment and the relative contribution of the total fungicides export from one representative plot was evaluated. During an entire period of fungicide application, from May to August 2011, the discharge and loads of dissolved and particle-laden KM and CY were monitored at the plot and catchment scales. The results showed larger export coefficient of KM and CY from catchment (0.064 and 0.041‰ for KM and CY respectively) than from the studied plot (0.009 and 0.023 ‰ for KM and CY respectively). It suggests that the plot margins especially the road network contributed as well to the fungicide loads. This result underlines the impact of fungicide drift on non-target areas. Furthermore, a larger rainfall threshold is necessary at the plot scale to trigger runoff and mobilise pesticides than on the road network. At the plot scale, a rapid dissipation of the both fungicides in the top soil was observed. It highlights that the risky period encompasses the first rainfall events triggering runoff after the applications. At both scales, KM and CY were not detected in suspended solids (i.e. > 0.7 µm). However their partitioning in runoff water differed. 64.1 and 91.8% of the KM load was detected in the dissolved phase (i.e. particulate phase (i.e. between 0.22 and 0.7 µm) at the plot and catchment scales respectively. Although KM and CY have similar lab-defined properties, our results

  14. Analysing spatially extended high-dimensional dynamics by recurrence plots

    Energy Technology Data Exchange (ETDEWEB)

    Marwan, Norbert, E-mail: marwan@pik-potsdam.de [Potsdam Institute for Climate Impact Research, 14412 Potsdam (Germany); Kurths, Jürgen [Potsdam Institute for Climate Impact Research, 14412 Potsdam (Germany); Humboldt Universität zu Berlin, Institut für Physik (Germany); Nizhny Novgorod State University, Department of Control Theory, Nizhny Novgorod (Russian Federation); Foerster, Saskia [GFZ German Research Centre for Geosciences, Section 1.4 Remote Sensing, Telegrafenberg, 14473 Potsdam (Germany)

    2015-05-08

    Recurrence plot based measures of complexity are capable tools for characterizing complex dynamics. In this letter we show the potential of selected recurrence plot measures for the investigation of even high-dimensional dynamics. We apply this method on spatially extended chaos, such as derived from the Lorenz96 model and show that the recurrence plot based measures can qualitatively characterize typical dynamical properties such as chaotic or periodic dynamics. Moreover, we demonstrate its power by analysing satellite image time series of vegetation cover with contrasting dynamics as a spatially extended and potentially high-dimensional example from the real world. - Highlights: • We use recurrence plots for analysing partially extended dynamics. • We investigate the high-dimensional chaos of the Lorenz96 model. • The approach distinguishes different spatio-temporal dynamics. • We use the method for studying vegetation cover time series.

  15. Selection of Plot Remeasurement in an Annual Inventory

    Science.gov (United States)

    Mark H. Hansen; Hans T. Schreuder; Dave Heinzen

    2000-01-01

    A plot selection approach is proposed based on experience from the Annual Forest Inventory System (AFIS) in the Aspen-Birch Unit of northestern Minnesota. The emphasisis on a mixture of strategies. Although the Agricultural Act of 1998 requires that a fixed 20 percent of plots be measured each year in each state, sooner or later we will need to vary the scheme to...

  16. Surface stabilization and revegetation test plots

    International Nuclear Information System (INIS)

    Sackschewsky, M.R.; Kemp, C.J.; Hayward, W.M.

    1993-09-01

    Westinghouse Hanford Company Decommissioning and Decontamination Engineering Group and Environmental Technology and Assessment Groups are developing new technologies to improve revegetation techniques for interim stabilization control over underground waste sites within the Radiation Area Remedial Action Program. Successful revegetation is an integral aspect of waste isolation strategy. Unfortunately, revegetation can be very difficult to achieve on the Hanford Site due to several factors: low annual precipitation, unpredictable timing of precipitation, low fertility of available soils, and coarse physical texture of soils covering waste sites. The tests in this report were performed during fiscal years 1992 and 1993 and include the use of two soil sealants in combination with bare soil and a soil/compost mixture and a comparison of a wheatgrass mixture and a native seed mixture. Hydroprobe access ports were placed in one-half of the test plots and moisture data was collected. Soil fertility and plant community characteristics were monitored during the two years of the test. During the first year all sites with compost provided additional fertility and retained greater amounts of soil moisture than noncomposted sites. The use of Enduraseal soil fixative provided greater soil moisture than the use of Aerospray-77 soil fixative. During the second year the use of compost and soil fixative's had a lesser effect on soil moisture. During late summer periods all treatments had very similar soil moisture profiles. The use of compost greatly increased vegetative cover and soil fertility in comparison to sites that had no compost added. Testing of the seed mixtures found that Siberian wheatgrass and Sandberg's bluegrass were the most dominant of the seeded species observed. All plots exhibited a dominant plant cover of volunteer cheatgrass. Biomass production was significantly greater on plots with compost than on the noncomposted plots

  17. The Use of Plackett-Burman Designs to Construct Split Plot Designs.

    NARCIS (Netherlands)

    Kulahci, M.; Bisgaard, S.

    2005-01-01

    Abstract When some factors are hard to change and others are relatively easier, split-plot experiments are often an economic alternative to fully randomized designs. Split-plot experiments, with their structure of subplot arrays imbedded within whole-plot arrays, have a tendency to become large,

  18. Splatterplots: overcoming overdraw in scatter plots.

    Science.gov (United States)

    Mayorga, Adrian; Gleicher, Michael

    2013-09-01

    We introduce Splatterplots, a novel presentation of scattered data that enables visualizations that scale beyond standard scatter plots. Traditional scatter plots suffer from overdraw (overlapping glyphs) as the number of points per unit area increases. Overdraw obscures outliers, hides data distributions, and makes the relationship among subgroups of the data difficult to discern. To address these issues, Splatterplots abstract away information such that the density of data shown in any unit of screen space is bounded, while allowing continuous zoom to reveal abstracted details. Abstraction automatically groups dense data points into contours and samples remaining points. We combine techniques for abstraction with perceptually based color blending to reveal the relationship between data subgroups. The resulting visualizations represent the dense regions of each subgroup of the data set as smooth closed shapes and show representative outliers explicitly. We present techniques that leverage the GPU for Splatterplot computation and rendering, enabling interaction with massive data sets. We show how Splatterplots can be an effective alternative to traditional methods of displaying scatter data communicating data trends, outliers, and data set relationships much like traditional scatter plots, but scaling to data sets of higher density and up to millions of points on the screen.

  19. Standardized mean differences cause funnel plot distortion in publication bias assessments.

    Science.gov (United States)

    Zwetsloot, Peter-Paul; Van Der Naald, Mira; Sena, Emily S; Howells, David W; IntHout, Joanna; De Groot, Joris Ah; Chamuleau, Steven Aj; MacLeod, Malcolm R; Wever, Kimberley E

    2017-09-08

    Meta-analyses are increasingly used for synthesis of evidence from biomedical research, and often include an assessment of publication bias based on visual or analytical detection of asymmetry in funnel plots. We studied the influence of different normalisation approaches, sample size and intervention effects on funnel plot asymmetry, using empirical datasets and illustrative simulations. We found that funnel plots of the Standardized Mean Difference (SMD) plotted against the standard error (SE) are susceptible to distortion, leading to overestimation of the existence and extent of publication bias. Distortion was more severe when the primary studies had a small sample size and when an intervention effect was present. We show that using the Normalised Mean Difference measure as effect size (when possible), or plotting the SMD against a sample size-based precision estimate, are more reliable alternatives. We conclude that funnel plots using the SMD in combination with the SE are unsuitable for publication bias assessments and can lead to false-positive results.

  20. How much information is contained in a recurrence plot?

    International Nuclear Information System (INIS)

    Thiel, Marco; Romano, M. Carmen; Kurths, Juergen

    2004-01-01

    Recurrence plots have recently been recognized as a powerful tool for the analysis of data. Not only the visualization of structures of the time series but also the possibility to estimate invariants from them and the possibility to analyze non-stationary data sets are remarkable. However, the question of how much information is encoded in such a two-dimensional and binary representation has not been discussed so far. In this Letter we show that - under some conditions - it is possible to reconstruct an attractor from the recurrence plot, at least topologically. This means that all relevant dynamical information is contained in the plot

  1. TAURUS, Post-processor of 3-D Finite Elements Plots

    International Nuclear Information System (INIS)

    Brown, B.E.; Hallquist, J.O.; Kennedy, T.

    2002-01-01

    Description of program or function: TAURUS reads the binary plot files generated by the LLNL three-dimensional finite element analysis codes, NIKE3D (NESC 9725), DYNA3D (NESC 9909), TACO3D (NESC 9838), TOPAZ3D (NESC9599) and GEMINI and plots contours, time histories, and deformed shapes. Contours of a large number of quantities may be plotted on meshes consisting of plate, shell, and solid type elements. TAURUS can compute a variety of strain measures, reaction forces along constrained boundaries, and momentum. TAURUS has three phases: initialization, geometry display with contouring, and time history processing

  2. Comparative study on software development methodologies

    Directory of Open Access Journals (Sweden)

    Mihai Liviu DESPA

    2014-12-01

    Full Text Available This paper focuses on the current state of knowledge in the field of software development methodologies. It aims to set the stage for the formalization of a software development methodology dedicated to innovation orientated IT projects. The paper starts by depicting specific characteristics in software development project management. Managing software development projects involves techniques and skills that are proprietary to the IT industry. Also the software development project manager handles challenges and risks that are predominantly encountered in business and research areas that involve state of the art technology. Conventional software development stages are defined and briefly described. Development stages are the building blocks of any software development methodology so it is important to properly research this aspect. Current software development methodologies are presented. Development stages are defined for every showcased methodology. For each methodology a graphic representation is illustrated in order to better individualize its structure. Software development methodologies are compared by highlighting strengths and weaknesses from the stakeholder's point of view. Conclusions are formulated and a research direction aimed at formalizing a software development methodology dedicated to innovation orientated IT projects is enunciated.

  3. 9 CFR 108.6 - Revision of plot plans, blueprints, and legends.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Revision of plot plans, blueprints... FACILITY REQUIREMENTS FOR LICENSED ESTABLISHMENTS § 108.6 Revision of plot plans, blueprints, and legends... changes affecting the workflow are to be made. The licensee shall: (a) Prepare revised plot plans...

  4. Generalised recurrence plot analysis for spatial data

    International Nuclear Information System (INIS)

    Marwan, Norbert; Kurths, Juergen; Saparin, Peter

    2007-01-01

    Recurrence plot based methods are highly efficient and widely accepted tools for the investigation of time series or one-dimensional data. We present an extension of the recurrence plots and their quantifications in order to study recurrent structures in higher-dimensional spatial data. The capability of this extension is illustrated on prototypical 2D models. Next, the tested and proved approach is applied to assess the bone structure from CT images of human proximal tibia. We find that the spatial structures in trabecular bone become more recurrent during the bone loss in osteoporosis

  5. D.3.3 PLOT Persuasive Learning Design Framework

    DEFF Research Database (Denmark)

    Gram-Hansen, Sandra Burri

    2012-01-01

    In this third and final deliverable of WP3: Persuasive Learning Designs, the theoretical cross field between persuasion and learning and the practical analysis of the technological learning tools and products which are currently related to the PLOT project, namely the GLOMaker and the 3ET tool......, are linked together as persuasive learning designs are defined and exemplified through the four e-PLOT cases. Based on the literary study of D.3.1 as well as the subsequent discussions and reflections regarding the theoretical foundation and practical application of persuasive learning technologies......-PLOT work cases. In conclusion, the report presents a number of suggestions regarding the improvement of the two learning tools, which from a theoretical perspective will enhance the persuasive potential, and which can be taken into consideration in WP4 and 5....

  6. 9 CFR 108.7 - Filing of plot plans, blueprints, and legends.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Filing of plot plans, blueprints, and... REQUIREMENTS FOR LICENSED ESTABLISHMENTS § 108.7 Filing of plot plans, blueprints, and legends. Three copies of all plot plans, blueprints, and legends, including revisions, shall be submitted to Animal and Plant...

  7. SEGY to ASCII Conversion and Plotting Program 2.0

    Science.gov (United States)

    Goldman, Mark R.

    2005-01-01

    INTRODUCTION SEGY has long been a standard format for storing seismic data and header information. Almost every seismic processing package can read and write seismic data in SEGY format. In the data processing world, however, ASCII format is the 'universal' standard format. Very few general-purpose plotting or computation programs will accept data in SEGY format. The software presented in this report, referred to as SEGY to ASCII (SAC), converts seismic data written in SEGY format (Barry et al., 1975) to an ASCII data file, and then creates a postscript file of the seismic data using a general plotting package (GMT, Wessel and Smith, 1995). The resulting postscript file may be plotted by any standard postscript plotting program. There are two versions of SAC: one version for plotting a SEGY file that contains a single gather, such as a stacked CDP or migrated section, and a second version for plotting multiple gathers from a SEGY file containing more than one gather, such as a collection of shot gathers. Note that if a SEGY file has multiple gathers, then each gather must have the same number of traces per gather, and each trace must have the same sample interval and number of samples per trace. SAC will read several common standards of SEGY data, including SEGY files with sample values written in either IBM or IEEE floating-point format. In addition, utility programs are present to convert non-standard Seismic Unix (.sux) SEGY files and PASSCAL (.rsy) SEGY files to standard SEGY files. SAC allows complete user control over all plotting parameters including label size and font, tick mark intervals, trace scaling, and the inclusion of a title and descriptive text. SAC shell scripts create a postscript image of the seismic data in vector rather than bitmap format, using GMT's pswiggle command. Although this can produce a very large postscript file, the image quality is generally superior to that of a bitmap image, and commercial programs such as Adobe Illustrator

  8. Three computer codes to read, plot, and tabulate operational test-site recorded solar data. [TAPFIL, CHPLOT, and WRTCNL codes

    Energy Technology Data Exchange (ETDEWEB)

    Stewart, S.D.; Sampson, R.J. Jr.; Stonemetz, R.E.; Rouse, S.L.

    1980-07-01

    A computer program, TAPFIL, has been developed by MSFC to read data from an IBM 360 tape for use on the PDP 11/70. The information (insolation, flowrates, temperatures, etc.) from 48 operational solar heating and cooling test sites is stored on the tapes. Two other programs, CHPLOT and WRTCNL, have been developed to plot and tabulate the data. These data will be used in the evaluation of collector efficiency and solar system performance. This report describes the methodology of the programs, their inputs, and their outputs.

  9. Model-independent plot of dynamic PET data facilitates data interpretation and model selection.

    Science.gov (United States)

    Munk, Ole Lajord

    2012-02-21

    When testing new PET radiotracers or new applications of existing tracers, the blood-tissue exchange and the metabolism need to be examined. However, conventional plots of measured time-activity curves from dynamic PET do not reveal the inherent kinetic information. A novel model-independent volume-influx plot (vi-plot) was developed and validated. The new vi-plot shows the time course of the instantaneous distribution volume and the instantaneous influx rate. The vi-plot visualises physiological information that facilitates model selection and it reveals when a quasi-steady state is reached, which is a prerequisite for the use of the graphical analyses by Logan and Gjedde-Patlak. Both axes of the vi-plot have direct physiological interpretation, and the plot shows kinetic parameter in close agreement with estimates obtained by non-linear kinetic modelling. The vi-plot is equally useful for analyses of PET data based on a plasma input function or a reference region input function. The vi-plot is a model-independent and informative plot for data exploration that facilitates the selection of an appropriate method for data analysis. Copyright © 2011 Elsevier Ltd. All rights reserved.

  10. Atrial fibrillation detection by heart rate variability in Poincare plot.

    Science.gov (United States)

    Park, Jinho; Lee, Sangwook; Jeon, Moongu

    2009-12-11

    Atrial fibrillation (AFib) is one of the prominent causes of stroke, and its risk increases with age. We need to detect AFib correctly as early as possible to avoid medical disaster because it is likely to proceed into a more serious form in short time. If we can make a portable AFib monitoring system, it will be helpful to many old people because we cannot predict when a patient will have a spasm of AFib. We analyzed heart beat variability from inter-beat intervals obtained by a wavelet-based detector. We made a Poincare plot using the inter-beat intervals. By analyzing the plot, we extracted three feature measures characterizing AFib and non-AFib: the number of clusters, mean stepping increment of inter-beat intervals, and dispersion of the points around a diagonal line in the plot. We divided distribution of the number of clusters into two and calculated mean value of the lower part by k-means clustering method. We classified data whose number of clusters is more than one and less than this mean value as non-AFib data. In the other case, we tried to discriminate AFib from non-AFib using support vector machine with the other feature measures: the mean stepping increment and dispersion of the points in the Poincare plot. We found that Poincare plot from non-AFib data showed some pattern, while the plot from AFib data showed irregularly irregular shape. In case of non-AFib data, the definite pattern in the plot manifested itself with some limited number of clusters or closely packed one cluster. In case of AFib data, the number of clusters in the plot was one or too many. We evaluated the accuracy using leave-one-out cross-validation. Mean sensitivity and mean specificity were 91.4% and 92.9% respectively. Because pulse beats of ventricles are less likely to be influenced by baseline wandering and noise, we used the inter-beat intervals to diagnose AFib. We visually displayed regularity of the inter-beat intervals by way of Poincare plot. We tried to design an

  11. Polar plot representation of time-resolved fluorescence.

    Science.gov (United States)

    Eichorst, John Paul; Wen Teng, Kai; Clegg, Robert M

    2014-01-01

    Measuring changes in a molecule's fluorescence emission is a common technique to study complex biological systems such as cells and tissues. Although the steady-state fluorescence intensity is frequently used, measuring the average amount of time that a molecule spends in the excited state (the fluorescence lifetime) reveals more detailed information about its local environment. The lifetime is measured in the time domain by detecting directly the decay of fluorescence following excitation by short pulse of light. The lifetime can also be measured in the frequency domain by recording the phase and amplitude of oscillation in the emitted fluorescence of the sample in response to repetitively modulated excitation light. In either the time or frequency domain, the analysis of data to extract lifetimes can be computationally intensive. For example, a variety of iterative fitting algorithms already exist to determine lifetimes from samples that contain multiple fluorescing species. However, recently a method of analysis referred to as the polar plot (or phasor plot) is a graphical tool that projects the time-dependent features of the sample's fluorescence in either the time or frequency domain into the Cartesian plane to characterize the sample's lifetime. The coordinate transformations of the polar plot require only the raw data, and hence, there are no uncertainties from extensive corrections or time-consuming fitting in this analysis. In this chapter, the history and mathematical background of the polar plot will be presented along with examples that highlight how it can be used in both cuvette-based and imaging applications.

  12. An ecoinformatics application for forest dynamics plot data management and sharing

    Science.gov (United States)

    Chau-Chin Lin; Abd Rahman Kassim; Kristin Vanderbilt; Donald Henshaw; Eda C. Melendez-Colom; John H. Porter; Kaoru Niiyama; Tsutomu Yagihashi; Sek Aun Tan; Sheng-Shan Lu; Chi-Wen Hsiao; Li-Wan Chang; Meei-Ru. Jeng

    2011-01-01

    Several forest dynamics plot research projects in the East-Asia Pacific region of the International Long-Term Ecological Research network actively collect long-term data, and some of these large plots are members of the Center for Tropical Forest Science network. The wealth of forest plot data presents challenges in information management to researchers. In order to...

  13. Emotions Induced by Operatic Music: Psychophysiological Effects of Music, Plot, and Acting: A Scientist's Tribute to Maria Callas

    Science.gov (United States)

    Baltes, Felicia Rodica; Avram, Julia; Miclea, Mircea; Miu, Andrei C.

    2011-01-01

    Operatic music involves both singing and acting (as well as rich audiovisual background arising from the orchestra and elaborate scenery and costumes) that multiply the mechanisms by which emotions are induced in listeners. The present study investigated the effects of music, plot, and acting performance on emotions induced by opera. There were…

  14. Effects of plot size on forest-type algorithm accuracy

    Science.gov (United States)

    James A. Westfall

    2009-01-01

    The Forest Inventory and Analysis (FIA) program utilizes an algorithm to consistently determine the forest type for forested conditions on sample plots. Forest type is determined from tree size and species information. Thus, the accuracy of results is often dependent on the number of trees present, which is highly correlated with plot area. This research examines the...

  15. Fitting diameter distribution models to data from forest inventories with concentric plot design

    Energy Technology Data Exchange (ETDEWEB)

    Nanos, N.; Sjöstedt de Luna, S.

    2017-11-01

    Aim: Several national forest inventories use a complex plot design based on multiple concentric subplots where smaller diameter trees are inventoried when lying in the smaller-radius subplots and ignored otherwise. Data from these plots are truncated with threshold (truncation) diameters varying according to the distance from the plot centre. In this paper we designed a maximum likelihood method to fit the Weibull diameter distribution to data from concentric plots. Material and methods: Our method (M1) was based on multiple truncated probability density functions to build the likelihood. In addition, we used an alternative method (M2) presented recently. We used methods M1 and M2 as well as two other reference methods to estimate the Weibull parameters in 40000 simulated plots. The spatial tree pattern of the simulated plots was generated using four models of spatial point patterns. Two error indices were used to assess the relative performance of M1 and M2 in estimating relevant stand-level variables. In addition, we estimated the Quadratic Mean plot Diameter (QMD) using Expansion Factors (EFs). Main results: Methods M1 and M2 produced comparable estimation errors in random and cluster tree spatial patterns. Method M2 produced biased parameter estimates in plots with inhomogeneous Poisson patterns. Estimation of QMD using EFs produced biased results in plots within inhomogeneous intensity Poisson patterns. Research highlights:We designed a new method to fit the Weibull distribution to forest inventory data from concentric plots that achieves high accuracy and precision in parameter estimates regardless of the within-plot spatial tree pattern.

  16. Cross-plotting of rock properties for fluid discrimination using well ...

    African Journals Online (AJOL)

    properties and their attributes (combination of rock properties) cross-plots have been attempted using well data from an offshore field of the Niger Delta as a case study. Numerous cross-plotting techniques of rock- properties/attributes derived from ...

  17. The Effect of Plot Size on Some Pratylenchus Penetrans ...

    African Journals Online (AJOL)

    Pratylenchus penetrans counts obtained from a rose field, sampled sequentially by decreasing the plot sizes were computed to obtain the respective sample means, variance and k-value of the negative binomial distribution. Plots 21 m x 80 m, 3.6 m x 3.6 m and 0.6 m x 0.6 m were sampled for the nematode. It is reported ...

  18. [Heart rate variability study based on a novel RdR RR Intervals Scatter Plot].

    Science.gov (United States)

    Lu, Hongwei; Lu, Xiuyun; Wang, Chunfang; Hua, Youyuan; Tian, Jiajia; Liu, Shihai

    2014-08-01

    On the basis of Poincare scatter plot and first order difference scatter plot, a novel heart rate variability (HRV) analysis method based on scatter plots of RR intervals and first order difference of RR intervals (namely, RdR) was proposed. The abscissa of the RdR scatter plot, the x-axis, is RR intervals and the ordinate, y-axis, is the difference between successive RR intervals. The RdR scatter plot includes the information of RR intervals and the difference between successive RR intervals, which captures more HRV information. By RdR scatter plot analysis of some records of MIT-BIH arrhythmias database, we found that the scatter plot of uncoupled premature ventricular contraction (PVC), coupled ventricular bigeminy and ventricular trigeminy PVC had specific graphic characteristics. The RdR scatter plot method has higher detecting performance than the Poincare scatter plot method, and simpler and more intuitive than the first order difference method.

  19. Flyby Error Analysis Based on Contour Plots for the Cassini Tour

    Science.gov (United States)

    Stumpf, P. W.; Gist, E. M.; Goodson, T. D.; Hahn, Y.; Wagner, S. V.; Williams, P. N.

    2008-01-01

    The maneuver cancellation analysis consists of cost contour plots employed by the Cassini maneuver team. The plots are two-dimensional linear representations of a larger six-dimensional solution to a multi-maneuver, multi-encounter mission at Saturn. By using contours plotted with the dot product of vectors B and R and the dot product of vectors B and T components, it is possible to view the effects delta V on for various encounter positions in the B-plane. The plot is used in operations to help determine if the Approach Maneuver (ensuing encounter minus three days) and/or the Cleanup Maneuver (ensuing encounter plus three days) can be cancelled and also is a linear check of an integrated solution.

  20. Experimental Garden Plots for Botany Lessons

    Science.gov (United States)

    Gorodnicheva, V. V.; Vasil'eva, E. I.

    1976-01-01

    Discussion of the botany lessons used at two schools points out the need for fifth and sixth grade students to be taught the principles of plant life through observations made at an experimental garden plot at the school. (ND)

  1. Contemplation on Plot and Personification in Tehran Makhuf

    OpenAIRE

    Mohammad Pashaei; Mirjalil Akrami; Mirjalil Akrami

    2013-01-01

     Abstract Story is one of the important and influential literary genres that deserves to research on its structure and content .By study and analysis of a story, the reader could comprehend the textual messages and change his attitude toward life and different issues .After defining of the social novel, the author tries to analyze plot and personification in novel of âTehran-e- Makhufâ and respond to the questions on the method employed for plot and personification and analyze it from pl...

  2. Complexity Plots

    KAUST Repository

    Thiyagalingam, Jeyarajan

    2013-06-01

    In this paper, we present a novel visualization technique for assisting the observation and analysis of algorithmic complexity. In comparison with conventional line graphs, this new technique is not sensitive to the units of measurement, allowing multivariate data series of different physical qualities (e.g., time, space and energy) to be juxtaposed together conveniently and consistently. It supports multivariate visualization as well as uncertainty visualization. It enables users to focus on algorithm categorization by complexity classes, while reducing visual impact caused by constants and algorithmic components that are insignificant to complexity analysis. It provides an effective means for observing the algorithmic complexity of programs with a mixture of algorithms and black-box software through visualization. Through two case studies, we demonstrate the effectiveness of complexity plots in complexity analysis in research, education and application. © 2013 The Author(s) Computer Graphics Forum © 2013 The Eurographics Association and Blackwell Publishing Ltd.

  3. [Effect of comprehensive control and prevention for chronic disease in demonstration plot of Chongqing].

    Science.gov (United States)

    Qi, Li; Ding, Xian-bin; Mao, De-qiang; Feng, Lian-gui; Wang, Yu-lin; Jiao, Yan; Zhang, Chun-hua; Lü, Xiao-yan; Li, Hong; Xia, Yi-yin

    2013-03-01

    To evaluate the effect of comprehensive control and prevention for chronic diseases in demonstration plot of Chongqing. Residents were enrolled through multi-stage stratified random sampling method from 17 districts or counties which had successfully established demonstration plots and 21 districts or counties which had not established demonstration plots (non-demonstration plot for short) yet on May, 2012. Questionnaire was designed to survey awareness of health knowledge, health behaviors and utilization of health supportive tools. The results were analyzed by SPSS 15.0 software. We investigated 15 108 residents, 6156 of which were in demonstration plot and others (8951) were not. The findings revealed the percentage of the people who were aware the national action of health lifestyle in demonstration plot and in non-demonstration plot were 44.4% (2734/6157) and 40.2% (3598/8951), respectively, and the awareness of the hypertension risk of too much sodium were 72.4% (4458/6156) and 67.5% (6042/8951), respectively, and the awareness of the cardinal vascular disease (CVD) risk of obesity and overweight were 77.2% (4753/6157) and 69.6% (6230/8951), respectively. About the residents' health behaviors in demonstration plot and in non-demonstration plot, the utilization rates of salt restriction scoop or pot were 23.5% (1447/6157) and 17.9% (1602/8951), and the utilization rates of oil restriction pot were 16.7% (1028/6157) and 11.8% (1064/8951), respectively. Totally, 33 of the 37 indexes were shown higher in demonstration plot than that in non-demonstration plot (P plot was more effective, and the remarkable improvement of health knowledge and behaviors level had been achieved in demonstration plot.

  4. Fitting Data to Model: Structural Equation Modeling Diagnosis Using Two Scatter Plots

    Science.gov (United States)

    Yuan, Ke-Hai; Hayashi, Kentaro

    2010-01-01

    This article introduces two simple scatter plots for model diagnosis in structural equation modeling. One plot contrasts a residual-based M-distance of the structural model with the M-distance for the factor score. It contains information on outliers, good leverage observations, bad leverage observations, and normal cases. The other plot contrasts…

  5. Zipper plot: visualizing transcriptional activity of genomic regions.

    Science.gov (United States)

    Avila Cobos, Francisco; Anckaert, Jasper; Volders, Pieter-Jan; Everaert, Celine; Rombaut, Dries; Vandesompele, Jo; De Preter, Katleen; Mestdagh, Pieter

    2017-05-02

    Reconstructing transcript models from RNA-sequencing (RNA-seq) data and establishing these as independent transcriptional units can be a challenging task. Current state-of-the-art tools for long non-coding RNA (lncRNA) annotation are mainly based on evolutionary constraints, which may result in false negatives due to the overall limited conservation of lncRNAs. To tackle this problem we have developed the Zipper plot, a novel visualization and analysis method that enables users to simultaneously interrogate thousands of human putative transcription start sites (TSSs) in relation to various features that are indicative for transcriptional activity. These include publicly available CAGE-sequencing, ChIP-sequencing and DNase-sequencing datasets. Our method only requires three tab-separated fields (chromosome, genomic coordinate of the TSS and strand) as input and generates a report that includes a detailed summary table, a Zipper plot and several statistics derived from this plot. Using the Zipper plot, we found evidence of transcription for a set of well-characterized lncRNAs and observed that fewer mono-exonic lncRNAs have CAGE peaks overlapping with their TSSs compared to multi-exonic lncRNAs. Using publicly available RNA-seq data, we found more than one hundred cases where junction reads connected protein-coding gene exons with a downstream mono-exonic lncRNA, revealing the need for a careful evaluation of lncRNA 5'-boundaries. Our method is implemented using the statistical programming language R and is freely available as a webtool.

  6. Archetype modeling methodology.

    Science.gov (United States)

    Moner, David; Maldonado, José Alberto; Robles, Montserrat

    2018-03-01

    Clinical Information Models (CIMs) expressed as archetypes play an essential role in the design and development of current Electronic Health Record (EHR) information structures. Although there exist many experiences about using archetypes in the literature, a comprehensive and formal methodology for archetype modeling does not exist. Having a modeling methodology is essential to develop quality archetypes, in order to guide the development of EHR systems and to allow the semantic interoperability of health data. In this work, an archetype modeling methodology is proposed. This paper describes its phases, the inputs and outputs of each phase, and the involved participants and tools. It also includes the description of the possible strategies to organize the modeling process. The proposed methodology is inspired by existing best practices of CIMs, software and ontology development. The methodology has been applied and evaluated in regional and national EHR projects. The application of the methodology provided useful feedback and improvements, and confirmed its advantages. The conclusion of this work is that having a formal methodology for archetype development facilitates the definition and adoption of interoperable archetypes, improves their quality, and facilitates their reuse among different information systems and EHR projects. Moreover, the proposed methodology can be also a reference for CIMs development using any other formalism. Copyright © 2018 Elsevier Inc. All rights reserved.

  7. SpectraPLOT, Visualization Package with a User-Friendly Graphical Interface

    Science.gov (United States)

    Sebald, James; Macfarlane, Joseph; Golovkin, Igor

    2017-10-01

    SPECT3D is a collisional-radiative spectral analysis package designed to compute detailed emission, absorption, or x-ray scattering spectra, filtered images, XRD signals, and other synthetic diagnostics. The spectra and images are computed for virtual detectors by post-processing the results of hydrodynamics simulations in 1D, 2D, and 3D geometries. SPECT3D can account for a variety of instrumental response effects so that direct comparisons between simulations and experimental measurements can be made. SpectraPLOT is a user-friendly graphical interface for viewing a wide variety of results from SPECT3D simulations, and applying various instrumental effects to the simulated images and spectra. We will present SpectraPLOT's ability to display a variety of data, including spectra, images, light curves, streaked spectra, space-resolved spectra, and drilldown plasma property plots, for an argon-doped capsule implosion experiment example. Future SpectraPLOT features and enhancements will also be discussed.

  8. On the Nature of Earth-Mars Porkchop Plots

    Science.gov (United States)

    Woolley, Ryan C.; Whetsel, Charles W.

    2013-01-01

    Porkchop plots are a quick and convenient tool to help mission designers plan ballistic trajectories between two bodies. Parameter contours give rise to the familiar 'porkchop' shape. Each synodic period the pattern repeats, but not exactly, primarily due to differences in inclination and non-zero eccentricity. In this paper we examine the morphological features of Earth-to-Mars porkchop plots and the orbital characteristics that create them. These results are compared to idealistic and optimized transfers. Conclusions are drawn about 'good' opportunities versus 'bad' opportunities for different mission applications.

  9. [Effects of sampling plot number on tree species distribution prediction under climate change].

    Science.gov (United States)

    Liang, Yu; He, Hong-Shi; Wu, Zhi-Wei; Li, Xiao-Na; Luo, Xu

    2013-05-01

    Based on the neutral landscapes under different degrees of landscape fragmentation, this paper studied the effects of sampling plot number on the prediction of tree species distribution at landscape scale under climate change. The tree species distribution was predicted by the coupled modeling approach which linked an ecosystem process model with a forest landscape model, and three contingent scenarios and one reference scenario of sampling plot numbers were assumed. The differences between the three scenarios and the reference scenario under different degrees of landscape fragmentation were tested. The results indicated that the effects of sampling plot number on the prediction of tree species distribution depended on the tree species life history attributes. For the generalist species, the prediction of their distribution at landscape scale needed more plots. Except for the extreme specialist, landscape fragmentation degree also affected the effects of sampling plot number on the prediction. With the increase of simulation period, the effects of sampling plot number on the prediction of tree species distribution at landscape scale could be changed. For generalist species, more plots are needed for the long-term simulation.

  10. Priorities for methodological research on patient and public involvement in clinical trials: A modified Delphi process.

    Science.gov (United States)

    Kearney, Anna; Williamson, Paula; Young, Bridget; Bagley, Heather; Gamble, Carrol; Denegri, Simon; Muir, Delia; Simon, Natalie A; Thomas, Stephen; Elliot, Jim T; Bulbeck, Helen; Crocker, Joanna C; Planner, Claire; Vale, Claire; Clarke, Mike; Sprosen, Tim; Woolfall, Kerry

    2017-12-01

    Despite increasing international interest, there is a lack of evidence about the most efficient, effective and acceptable ways to implement patient and public involvement (PPI) in clinical trials. To identify the priorities of UK PPI stakeholders for methodological research to help resolve uncertainties about PPI in clinical trials. A modified Delphi process including a two round online survey and a stakeholder consensus meeting. In total, 237 people registered of whom 219 (92%) completed the first round. One hundred and eighty-seven of 219 (85%) completed the second; 25 stakeholders attended the consensus meeting. Round 1 of the survey comprised 36 topics; 42 topics were considered in round 2 and at the consensus meeting. Approximately 96% of meeting participants rated the top three topics as equally important. These were as follows: developing strong and productive working relationships between researchers and PPI contributors; exploring PPI practices in selecting trial outcomes of importance to patients; and a systematic review of PPI activity to improve the accessibility and usefulness of trial information (eg participant information sheets) for participants. The prioritized methodological research topics indicate important areas of uncertainty about PPI in trials. Addressing these uncertainties will be critical to enhancing PPI. Our findings should be used in the planning and funding of PPI in clinical trials to help focus research efforts and minimize waste. © 2017 The Authors Health Expectations Published by John Wiley & Sons Ltd.

  11. Activities: Plotting and Predicting from Pairs.

    Science.gov (United States)

    Shulte, Albert P.; Swift, Jim

    1984-01-01

    This teacher's guide provides objectives, procedures, and list of materials needed for activities which center around the use of a scatter plot to examine relationships shown by bivariate data. The activities are suitable for grades 7 to 12. Four student worksheets are included. (JN)

  12. A Guided Inquiry on Hubble Plots and the Big Bang

    Science.gov (United States)

    Forringer, Ted

    2014-01-01

    In our science for non-science majors course "21st Century Physics," we investigate modern "Hubble plots" (plots of velocity versus distance for deep space objects) in order to discuss the Big Bang, dark matter, and dark energy. There are two potential challenges that our students face when encountering these topics for the…

  13. A Bayesian CUSUM plot: Diagnosing quality of treatment.

    Science.gov (United States)

    Rosthøj, Steen; Jacobsen, Rikke-Line

    2017-12-01

    To present a CUSUM plot based on Bayesian diagnostic reasoning displaying evidence in favour of "healthy" rather than "sick" quality of treatment (QOT), and to demonstrate a technique using Kaplan-Meier survival curves permitting application to case series with ongoing follow-up. For a case series with known final outcomes: Consider each case a diagnostic test of good versus poor QOT (expected vs. increased failure rates), determine the likelihood ratio (LR) of the observed outcome, convert LR to weight taking log to base 2, and add up weights sequentially in a plot showing how many times odds in favour of good QOT have been doubled. For a series with observed survival times and an expected survival curve: Divide the curve into time intervals, determine "healthy" and specify "sick" risks of failure in each interval, construct a "sick" survival curve, determine the LR of survival or failure at the given observation times, convert to weights, and add up. The Bayesian plot was applied retrospectively to 39 children with acute lymphoblastic leukaemia with completed follow-up, using Nordic collaborative results as reference, showing equal odds between good and poor QOT. In the ongoing treatment trial, with 22 of 37 children still at risk for event, QOT has been monitored with average survival curves as reference, odds so far favoring good QOT 2:1. QOT in small patient series can be assessed with a Bayesian CUSUM plot, retrospectively when all treatment outcomes are known, but also in ongoing series with unfinished follow-up. © 2017 John Wiley & Sons, Ltd.

  14. Plot - level stem volume estimation and tree species discrimination with CASI remote sensing

    Energy Technology Data Exchange (ETDEWEB)

    Holmgren, Johan; Wallerman, J.; Olsson, Haakan

    1999-10-01

    Spectral data from the Compact Airborne Spectrographic Imager (CASI), with four bands (460-495 nm, 550-580 nm, 660-682 nm, 740-762 nm) acquired from a forest test area (Lat. 60 deg 00` N, Long. 17 deg 18` E), the Kaettboele estate near Uppsala, was analysed together with forest data from a number of field plots. Data from two flight lines, one towards and the other perpendicular to the sun was used. Information about stem volume and species composition from plots with 10-m radius, 138 in the first and 120 in the second flight line, was available. There was a positive correlation (R{sup 2} 0.51-0.53) between stem volume and the inverted radiance for all four bands on plot level. The strong correlation between stem volume and a shadow density measure indicates that shadows explain much of the correlation. For the flight line perpendicular to the sun, the correlation was stronger for the side towards the sun compared to the side away from the sun. In the first flight line, plots with a stem volume > 120 m{sup 3}ha{sup -1} were classified according to the tree species composition (pine, spruce, deciduous trees). Groups were formed based on the classification, and the hypothesis that there was no difference in spectral radiance between these groups was tested. It was possible to separate pine dominated plots from spruce dominated plots. It was also possible to separate spruce dominated plots from spruce dominated plots with a minor portion of pine, but not pine dominated plots from pine dominated plots with a minor portion of spruce. The near-infrared band was the best band for discrimination of tree species 16 refs, 2 figs, 8 tabs

  15. Nuclear Zpif-type plots

    International Nuclear Information System (INIS)

    Ma Yugang

    2000-01-01

    Isospin dependent classical molecular dynamics model is used to investigate the nuclear disassembly of 129 Xe. Zpif-type plot in the field of linguistics is tested for the rank-classified cluster arrangement from this nuclear disassembly. It is found that the average cluster charge (or mass) of rank n in the charge (or mass) list is exactly inverse to its rank, i.e. there exists Zpif's law at the point of the liquid gas phase transition. This novel criterion can be used to diagnose the nuclear liquid gas phase transition experimentally and theoretically

  16. Master plot analysis of microcracking in graphite/epoxy and graphite/PEEK laminates

    Science.gov (United States)

    Nairn, John A.; Hu, Shoufeng; Bark, Jong Song

    1993-01-01

    We used a variational stress analysis and an energy release rate failure criterion to construct a master plot analysis of matrix microcracking. In the master plot, the results for all laminates of a single material are predicted to fall on a single line whose slope gives the microcracking toughness of the material. Experimental results from 18 different layups of AS4/3501-6 laminates show that the master plot analysis can explain all observations. In particular, it can explain the differences between microcracking of central 90 deg plies and of free-surface 90 deg plies. Experimental results from two different AS4/PEEK laminates tested at different temperatures can be explained by a modified master plot that accounts for changes in the residual thermal stresses. Finally, we constructed similar master plot analyses for previous literature microcracking models. All microcracking theories that ignore the thickness dependence of the stresses gave poor results.

  17. Patient involvement in Danish health care

    DEFF Research Database (Denmark)

    Vrangbaek, Karsten

    2015-01-01

    PURPOSE: The purpose of this paper is to investigate different types of patient involvement in Denmark, and to discuss the potential implications of pursuing several strategies for patient involvement simultaneously. DESIGN/METHODOLOGY/APPROACH: The paper presents a preliminary framework for anal......PURPOSE: The purpose of this paper is to investigate different types of patient involvement in Denmark, and to discuss the potential implications of pursuing several strategies for patient involvement simultaneously. DESIGN/METHODOLOGY/APPROACH: The paper presents a preliminary framework...... for analysis of patient involvement in health care. This framework is used to analyze key governance features of patient involvement in Denmark based on previous research papers and reports describing patient involvement in Danish health care. FINDINGS: Patient involvement is important in Denmark...... be identified when pursuing the strategies at the same time. RESEARCH LIMITATIONS/IMPLICATIONS: Because of the chosen research approach, the research results may lack generalizability. Therefore, researchers are encouraged to test the proposed framework further. PRACTICAL IMPLICATIONS: The paper includes...

  18. Complex Correlation Measure: a novel descriptor for Poincaré plot

    Directory of Open Access Journals (Sweden)

    Gubbi Jayavardhana

    2009-08-01

    Full Text Available Abstract Background Poincaré plot is one of the important techniques used for visually representing the heart rate variability. It is valuable due to its ability to display nonlinear aspects of the data sequence. However, the problem lies in capturing temporal information of the plot quantitatively. The standard descriptors used in quantifying the Poincaré plot (SD1, SD2 measure the gross variability of the time series data. Determination of advanced methods for capturing temporal properties pose a significant challenge. In this paper, we propose a novel descriptor "Complex Correlation Measure (CCM" to quantify the temporal aspect of the Poincaré plot. In contrast to SD1 and SD2, the CCM incorporates point-to-point variation of the signal. Methods First, we have derived expressions for CCM. Then the sensitivity of descriptors has been shown by measuring all descriptors before and after surrogation of the signal. For each case study, lag-1 Poincaré plots were constructed for three groups of subjects (Arrhythmia, Congestive Heart Failure (CHF and those with Normal Sinus Rhythm (NSR, and the new measure CCM was computed along with SD1 and SD2. ANOVA analysis distribution was used to define the level of significance of mean and variance of SD1, SD2 and CCM for different groups of subjects. Results CCM is defined based on the autocorrelation at different lags of the time series, hence giving an in depth measurement of the correlation structure of the Poincaré plot. A surrogate analysis was performed, and the sensitivity of the proposed descriptor was found to be higher as compared to the standard descriptors. Two case studies were conducted for recognizing arrhythmia and congestive heart failure (CHF subjects from those with NSR, using the Physionet database and demonstrated the usefulness of the proposed descriptors in biomedical applications. CCM was found to be a more significant (p = 6.28E-18 parameter than SD1 and SD2 in discriminating

  19. Aquifer test interpretation using derivative analysis and diagnostic plots

    Science.gov (United States)

    Hernández-Espriú, Antonio; Real-Rangel, Roberto; Cortés-Salazar, Iván; Castro-Herrera, Israel; Luna-Izazaga, Gabriela; Sánchez-León, Emilio

    2017-04-01

    Pumping tests remain a method of choice to deduce fundamental aquifer properties and to assess well condition. In the oil and gas (O&G) industry, well testing has been the core technique in examining reservoir behavior over the last 50 years. The pressure derivative by Bourdet, it is perhaps, the most significant single development in the history of well test analysis. Recently, the so-called diagnostics plots (e.g. drawdown and drawdown derivative in a log-log plot) have been successfully tested in aquifers. However, this procedure is still underutilized by groundwater professionals. This research illustrates the applicability range, advantages and drawbacks (e.g. smoothing procedures) of diagnostic plots using field examples from a wide spectrum of tests (short/long tests, constant/variable flow rates, drawdown/buildup stages, pumping well/observation well) in dissimilar geological conditions. We analyze new and pre-existent aquifer tests in Mexico, USA, Canada, Germany, France and Saudi Arabia. In constant flow rate tests, our results show that derivative analysis is an easy, robust and powerful tool to assess near-borehole damage effects, formation heterogeneity, boundaries, flow regimes, infinite-acting radial stages, i.e., valid Theisian framework, and fracture-driven flow. In step tests, the effectiveness relies on high-frequency drawdown measurements. Moreover, we adapt O&G analytical solutions to cater for the conditions in groundwater systems. In this context, further parameters can be computed analytically from the plots, such as skin factor, head losses, wellbore storage, distance to the boundary, channel-aquifer and/or fracture zone width, among others. Therefore, diagnostic plots should be considered a mandatory tool for pumping tests analysis among hydrogeologists. This project has been supported by DGAPA (UNAM) under the research project PAPIIT IN-112815.

  20. Method for application of nitrogen-15-labeled anhydrous ammonia to small plots

    International Nuclear Information System (INIS)

    Sanchez, C.A.; Blackmer, A.M.

    1987-01-01

    A method is described that permits precise application of anhydrous ammonia in bands to plots of the size often used in 15 N-tracer studies. This method involves placing a stainless-steel capillary tube in the soil where the ammonia is to be banded, attaching this tube to a cylinder of ammonia, and then pulling the tube through the soil with deposition of ammonia as an even band. The procedure has marked advantages over previously described methods because it can be used with mixtures of anhydrous ammonia and nitrification inhibitors and because the soil environment at the point of application is representative of the soil environment found when a conventional applicator is used

  1. Recurrence plot analysis of DNA sequences

    Energy Technology Data Exchange (ETDEWEB)

    Wu Zuobing [State Key Laboratory of Nonlinear Mechanics, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100080 (China)]. E-mail: wuzb@lnm.imech.ac.cn

    2004-11-15

    Recurrence plot technique of DNA sequences is established on metric representation and employed to analyze correlation structure of nucleotide strings. It is found that, in the transference of nucleotide strings, a human DNA fragment has a major correlation distance, but a yeast chromosome's correlation distance has a constant increasing.

  2. From LCAs to simplified models: a generic methodology applied to wind power electricity.

    Science.gov (United States)

    Padey, Pierryves; Girard, Robin; le Boulch, Denis; Blanc, Isabelle

    2013-02-05

    This study presents a generic methodology to produce simplified models able to provide a comprehensive life cycle impact assessment of energy pathways. The methodology relies on the application of global sensitivity analysis to identify key parameters explaining the impact variability of systems over their life cycle. Simplified models are built upon the identification of such key parameters. The methodology is applied to one energy pathway: onshore wind turbines of medium size considering a large sample of possible configurations representative of European conditions. Among several technological, geographical, and methodological parameters, we identified the turbine load factor and the wind turbine lifetime as the most influent parameters. Greenhouse Gas (GHG) performances have been plotted as a function of these key parameters identified. Using these curves, GHG performances of a specific wind turbine can be estimated, thus avoiding the undertaking of an extensive Life Cycle Assessment (LCA). This methodology should be useful for decisions makers, providing them a robust but simple support tool for assessing the environmental performance of energy systems.

  3. Using 7Be to document soil erosion on the weed plots

    International Nuclear Information System (INIS)

    Zhang Bo; Zhang Fengbao; Yang Mingyi

    2013-01-01

    Be tracing technology was applied to document soil erosion on the bare plot and weed plot, and compae soil erosion rate with the calculated rate. Results indicated that vegetation cover had obvious effect on the estimate of soil erosion rate on the weed plot using 7 Be measurement. Therefore, a factor of vegetation had been introduced into the Walling's model of converting 7 Be activity to soil erosion rate for estimating soil erosion rate on the weed slope surface. It was found that the soil erosion rates calculated by modified model were well close to the measured values on the weed plot, which illustrated that the modified model could be well used to estimate the rates of soil loss on the weed slope surface. These findings provide effective means for further study on the relationship between vegetation cover and soil erosion. (authors)

  4. Sacrifice as a plot device

    Directory of Open Access Journals (Sweden)

    Ashikhmanova Natalya Alexandrovna

    2015-12-01

    Full Text Available It is considered the plot device “sacrifice” as a meaningful component of the narrative. It sets a minimum of substantive meaning of this formation (the idea of getting something over the loss of something. The main types of sacrifice: sacrifice and self-sacrifice. Sacrifice means bringing something to sacrifice for the sake of an idea or someone else and implies a greater degree of external attributes. Self-sacrifice brings a loss of the intrinsic value of the character. Sacrifice as the action takes place consciously and, as a rule, does not require compensation in return. Victims sacrifice not only material things but spiritual as well. Their actions are certainly driven by the idea, which is of value. In the case of self-sacrifice victim is itself a victim. Present for sacrifice plays a certain role in the development of some of the stories of fabulous narratives. Search of the present can be a starting point in the development of fantastic narrative plot. As a sacrifice the present can be considered in three forms: in the form of material expression, in the form of immaterial substance, as well as a way to transfer the character into magical power through knowledge empowerment of its formulaic spells.

  5. Estimation of optimum plot sizes in field experiments with annatto Estimativa de tamanho ótimo de parcelas em experimentos com urucum

    Directory of Open Access Journals (Sweden)

    Anselmo Eloy Silveira Viana

    2002-08-01

    Full Text Available The objective of this study was to estimate the optimum plots size for experiments with annatto. The uniformity assay consisted of 12 rows with 12 plants in each row. The variety Bico de Pato was used, planted in 5 x 4 m spacing and evaluated at 5 years of age. Three methods were used: maximum curvature, modified maximum curvature and the comparison of variances. The plot size estimate varied according to the methodology used and the characteristic analyzed. The adequate plot size was found to be 107.2 m² (5 plants using the modified maximum curvature method, which resulted in more precise estimates , taking into consideration that the ideal plot should facilitate the efficient evaluation of all characteristics analyzed in this experiment.Objetivou-se estimar o tamanho ótimo de parcelas para experimentos com urucum. O ensaio de uniformidade foi formado de 12 fileiras com 12 plantas em cada fileira. Utilizou-se a variedade Bico de Pato, em espaçamento 5 x 4 m, avaliada aos cinco anos. Empregaram-se os métodos da máxima curvatura, da máxima curvatura modificado e da comparação de variâncias. A estimativa do tamanho de parcela variou com o método utilizado e com a característica analisada. Pelo método da máxima curvatura modificado, que permitiu a obtenção de estimativas mais precisas, e considerando-se que a parcela ideal deve possibilitar a avaliação eficiente de todas as características analisadas neste experimento, encontrou-se o tamanho adequado de parcela, 107,2 m² (cinco plantas.

  6. Representing Uncertainty on Model Analysis Plots

    Science.gov (United States)

    Smith, Trevor I.

    2016-01-01

    Model analysis provides a mechanism for representing student learning as measured by standard multiple-choice surveys. The model plot contains information regarding both how likely students in a particular class are to choose the correct answer and how likely they are to choose an answer consistent with a well-documented conceptual model.…

  7. Determination of boron as boric acid by automatic potentiometric titration using Gran plots [in pressurized water reactor coolant

    International Nuclear Information System (INIS)

    Midgley, D.; Gatford, C.

    1989-11-01

    Boron in PWR primary coolant and related waters may be determined as boric acid by titration with sodium hydroxide, using a glass electrode as a pH indicator. Earlier work has shown that this analysis can conveniently be carried out automatically with adequate precision and accuracy for routine use, although bias became apparent at the lowest concentrations tested. The latest titrators enable the titration data to be transformed mathematically to give two linear segments, before and after the end-point (Gran plots). The results are as precise as those from other titration methods (in which the end-point is found from the point of inflexion of a plot of pH against volume of titrant), but the bias at low concentrations is much reduced. This is achieved without extra time or involvement of the operator. (author)

  8. Meta-STEPP: subpopulation treatment effect pattern plot for individual patient data meta-analysis.

    Science.gov (United States)

    Wang, Xin Victoria; Cole, Bernard; Bonetti, Marco; Gelber, Richard D

    2016-09-20

    We have developed a method, called Meta-STEPP (subpopulation treatment effect pattern plot for meta-analysis), to explore treatment effect heterogeneity across covariate values in the meta-analysis setting for time-to-event data when the covariate of interest is continuous. Meta-STEPP forms overlapping subpopulations from individual patient data containing similar numbers of events with increasing covariate values, estimates subpopulation treatment effects using standard fixed-effects meta-analysis methodology, displays the estimated subpopulation treatment effect as a function of the covariate values, and provides a statistical test to detect possibly complex treatment-covariate interactions. Simulation studies show that this test has adequate type-I error rate recovery as well as power when reasonable window sizes are chosen. When applied to eight breast cancer trials, Meta-STEPP suggests that chemotherapy is less effective for tumors with high estrogen receptor expression compared with those with low expression. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  9. Comparison of Three Plot Selection Methods for Estimating Change in Temporally Variable, Spatially Clustered Populations.

    Energy Technology Data Exchange (ETDEWEB)

    Thompson, William L. [Bonneville Power Administration, Portland, OR (US). Environment, Fish and Wildlife

    2001-07-01

    Monitoring population numbers is important for assessing trends and meeting various legislative mandates. However, sampling across time introduces a temporal aspect to survey design in addition to the spatial one. For instance, a sample that is initially representative may lose this attribute if there is a shift in numbers and/or spatial distribution in the underlying population that is not reflected in later sampled plots. Plot selection methods that account for this temporal variability will produce the best trend estimates. Consequently, I used simulation to compare bias and relative precision of estimates of population change among stratified and unstratified sampling designs based on permanent, temporary, and partial replacement plots under varying levels of spatial clustering, density, and temporal shifting of populations. Permanent plots produced more precise estimates of change than temporary plots across all factors. Further, permanent plots performed better than partial replacement plots except for high density (5 and 10 individuals per plot) and 25% - 50% shifts in the population. Stratified designs always produced less precise estimates of population change for all three plot selection methods, and often produced biased change estimates and greatly inflated variance estimates under sampling with partial replacement. Hence, stratification that remains fixed across time should be avoided when monitoring populations that are likely to exhibit large changes in numbers and/or spatial distribution during the study period. Key words: bias; change estimation; monitoring; permanent plots; relative precision; sampling with partial replacement; temporary plots.

  10. Update of Part 61 Impacts Analysis Methodology. Methodology report. Volume 1

    International Nuclear Information System (INIS)

    Oztunali, O.I.; Roles, G.W.

    1986-01-01

    Under contract to the US Nuclear Regulatory Commission, the Envirosphere Company has expanded and updated the impacts analysis methodology used during the development of the 10 CFR Part 61 rule to allow improved consideration of the costs and impacts of treatment and disposal of low-level waste that is close to or exceeds Class C concentrations. The modifications described in this report principally include: (1) an update of the low-level radioactive waste source term, (2) consideration of additional alternative disposal technologies, (3) expansion of the methodology used to calculate disposal costs, (4) consideration of an additional exposure pathway involving direct human contact with disposed waste due to a hypothetical drilling scenario, and (5) use of updated health physics analysis procedures (ICRP-30). Volume 1 of this report describes the calculational algorithms of the updated analysis methodology

  11. Update of Part 61 Impacts Analysis Methodology. Methodology report. Volume 1

    Energy Technology Data Exchange (ETDEWEB)

    Oztunali, O.I.; Roles, G.W.

    1986-01-01

    Under contract to the US Nuclear Regulatory Commission, the Envirosphere Company has expanded and updated the impacts analysis methodology used during the development of the 10 CFR Part 61 rule to allow improved consideration of the costs and impacts of treatment and disposal of low-level waste that is close to or exceeds Class C concentrations. The modifications described in this report principally include: (1) an update of the low-level radioactive waste source term, (2) consideration of additional alternative disposal technologies, (3) expansion of the methodology used to calculate disposal costs, (4) consideration of an additional exposure pathway involving direct human contact with disposed waste due to a hypothetical drilling scenario, and (5) use of updated health physics analysis procedures (ICRP-30). Volume 1 of this report describes the calculational algorithms of the updated analysis methodology.

  12. Construction of an experimental plot seeder of wheat planting and compare it by imported one

    Directory of Open Access Journals (Sweden)

    I Eskandari

    2016-09-01

    Full Text Available Introduction Researchers frequently include multiple cultivars and fertility levels in field experiments. Therefore, the experiments sowing operation must represent a considerable saving in time and labor, compared to hand sowing. Greater flexibility in experimental design and setup could be achieved by equipment that enables quick changes in the cultivar and fertilizer rates from one plot to the next. A satisfactory seed drill must distribute a given quantity of seed evenly over a predetermined length of coulter row, the coulters must be spaced at exact intervals and depth of sowing must be uniform. In a self-propelled type of plot seeder, no coulter should run in a wheel track as the compaction of the soil can cause observable differences in vigor between plants in such a row and those in un-compacted rows. The machine should sow in succession from a try in which a series of seed pocket separated clearly and must be put into distributer funnel by an assistant operator. The length of gap being varied according to the nature and purpose of the plot. The objectives of this experiment were 1- to design and construct a local self-propelled plot seeder and 2- To compare it with the imported (Wintersteiger plot seeder in cereal breeding programs. Materials and Methods A small-plot seeder was designed and constructed to meet this objective. The unit consists of the following basic components: a toolbar for pulling a set of six blade coulter, an air compressor for lifting and putting down the openers and metering transmission drive wheel, an operators chair and work rack, one belt seed distribution. A cone-celled and rotor seed distributor is used for seed distribution to the openers. The cone system is connected to the gearbox and allows for great flexibility in changing cultivars, crop species, and plot length. This is driven by the separate drive wheel. The cone-celled distributor sows all the seed of the sample in making one complete turn. The

  13. On-Line 1D and 2D PLOT/LC-ESI-MS Using 10 μm i.d. Poly(styrene–divinylbenzene) Porous Layer Open Tubular (PLOT) Columns For Ultrasensitive Proteomic Analysis

    Science.gov (United States)

    Luo, Quanzhou; Yue, Guihua; Valaskovic, Gary A; Gu, Ye; Wu, Shiaw-Lin; Karger, Barry L.

    2008-01-01

    Following on our recent work, on-line one dimensional (1D) and two dimensional (2D) PLOT/LC-ESI-MS platforms using 3.2 m × 10 μm i.d. poly(styrenedivinylbenzene) (PS-DVB) porous layer open tubular (PLOT) columns have been developed to provide robust, high performance and ultrasensitive proteomic analysis. Using a PicoClear tee, the dead volume connection between a 50 μm i.d. PS-DVB monolithic microSPE column and the PLOT column was minimized. The microSPE/PLOT column assembly provided a separation performance similar to that obtained with direct injection onto the PLOT column at a mobile phase flow rate of 20 nL/min. The trace analysis potential of the platform was evaluated using an in-gel tryptic digest sample of a gel fraction (15 to 40 kDa) of a cervical cancer (SiHa) cell line. As an example of the sensitivity of the system, ∼2.5 ng of protein in 2 μL solution, an amount corresponding to 20 SiHa cells, was subjected to on-line microSPE-PLOT/LC-ESIMS/MS analysis using a linear ion trap MS. 237 peptides associated with 163 unique proteins were identified from a single analysis when using stringent criteria associated with a false positive rate less than 1% . The number of identified peptides and proteins increased to 638 and 343, respectively, as the injection amount was raised to ∼45 ng of protein, an amount corresponding to 350 SiHa cells. In comparison, only 338 peptides and 231 unique proteins were identified (false positive rate again less than 1%) from 750 ng of protein from the identical gel fraction, an amount corresponding to 6000 SiHa cells, using a typical 15 cm × 75 μm i.d. packed capillary column. The greater sensitivity, higher recovery, and higher resolving power of the PLOT column resulted in the increased number of identifications from only ∼5% of the injected sample amount. The resolving power of the microSPE/PLOT assembly was further extended by 2D chromatography via combination of the high-efficiency reversed phase PLOT column

  14. Experimental strategies in carrying out VCU for tobacco crop I: plot design and size.

    Science.gov (United States)

    Toledo, F H R B; Ramalho, M A P; Pulcinelli, C E; Bruzi, A T

    2013-09-19

    We aimed to establish standards for tobacco Valor de Cultivo e Uso (VCU) in Brazil. We obtained information regarding the size and design of plots of two varietal groups of tobacco (Virginia and Burley). Ten inbred lines of each varietal group were evaluated in a randomized complete block design with four replications. The plot contained 42 plants with six rows of seven columns each. For each experiment plant, considering the position of the respective plant in the plot (row and column) as a reference, cured leaf weight (g/plant), total sugar content (%), and total alkaloid content (%) were determined. The maximum curvature of the variations in coefficients was estimated. Trials with the number of plants per plot ranging from 2 to 41 were simulated. The use of a border was not justified because the interactions between inbred lines x position in the plots were never significant, showing that the behavior of the inbred lines coincided with the different positions. The plant performance varied according to the column position in the plot. To lessen the effect of this factor, the use of plots with more than one row is recommended. Experimental precision, evaluated by the CV%, increased with an increase in plot size; nevertheless, the maximum curvature of the variation coefficient method showed no expressive increase in precision if the number of plants was greater than seven. The result in identification of the best inbred line, in terms of the size of each plot, coincided with the maximum curvature method.

  15. Exploration of the forbidden regions of the Ramachandran plot (ϕ-ψ) with QTAIM.

    Science.gov (United States)

    Momen, Roya; Azizi, Alireza; Wang, Lingling; Ping, Yang; Xu, Tianlv; Kirk, Steven R; Li, Wenxuan; Manzhos, Sergei; Jenkins, Samantha

    2017-10-04

    A new QTAIM interpretation of the Ramachandran plot is formulated from the most and least facile eigenvectors of the second-derivative matrix of the electron density with a set of 29 magainin-2 peptide conformers. The presence of QTAIM eigenvectors associated with the most and least preferred directions of electronic charge density explained the role of hydrogen bonding, HH contacts and the glycine amino acid monomer in peptide folding. The highest degree of occupation of the QTAIM interpreted Ramachandran plot was found for the glycine amino acid monomer compared with the remaining backbone peptide bonds. The mobility of the QTAIM eigenvectors of the glycine amino acid monomer was higher than for the other amino acids and was comparable to that of the hydrogen bonding, explaining the flexibility of the magainin-2 backbone. We experimented with a variety of hybrid QTAIM-Ramachandran plots to highlight and explain why the glycine amino acid monomer largely occupies the 'forbidden' region on the Ramachandran plot. In addition, the new hybrid QTAIM-Ramachandran plots contained recognizable regions that can be associated with concepts familiar from the conventional Ramachandran plot whilst retaining the character of the QTAIM most and least preferred regions.

  16. Confidence limits for contribution plots in multivariate statistical process control using bootstrap estimates.

    Science.gov (United States)

    Babamoradi, Hamid; van den Berg, Frans; Rinnan, Åsmund

    2016-02-18

    In Multivariate Statistical Process Control, when a fault is expected or detected in the process, contribution plots are essential for operators and optimization engineers in identifying those process variables that were affected by or might be the cause of the fault. The traditional way of interpreting a contribution plot is to examine the largest contributing process variables as the most probable faulty ones. This might result in false readings purely due to the differences in natural variation, measurement uncertainties, etc. It is more reasonable to compare variable contributions for new process runs with historical results achieved under Normal Operating Conditions, where confidence limits for contribution plots estimated from training data are used to judge new production runs. Asymptotic methods cannot provide confidence limits for contribution plots, leaving re-sampling methods as the only option. We suggest bootstrap re-sampling to build confidence limits for all contribution plots in online PCA-based MSPC. The new strategy to estimate CLs is compared to the previously reported CLs for contribution plots. An industrial batch process dataset was used to illustrate the concepts. Copyright © 2016 Elsevier B.V. All rights reserved.

  17. The value of building plots in Italy - pdf

    Directory of Open Access Journals (Sweden)

    Paolo Rosato

    2014-12-01

    Full Text Available This paper suggests some analysis on dynamics of building plots value in Italy. This is an important subject, since the study of changes in plots value in space and time enables the evaluation of urban rent, which is essential for a fair and effective planning. The analysis confirm past hypothesis which are well known to real estate market operators. The first resulting fact is that the changes in building plots value are concurrent to those in real estate value and the increase occurring in the last years is in relative terms higher than the past one. This seems to confirm that, during real estate market expansion, most of the increase of buildings’ value is attributable to the land rent. The second observation is about value dynamics over time: it has been observed that, during an expansion in demand, the value significantly increases in central areas, much more than in peripheral ones; this means that absolute rent arising from shortage in urban areas is higher than the differential rent created through urban expansion in peripheral areas. Finally, it was highlighted that the factors affecting the value in building areas play different roles, depending on their location relative to the urban centre, identifying differently structured market segments.

  18. Application of machine learning for the evaluation of turfgrass plots using aerial images

    Science.gov (United States)

    Ding, Ke; Raheja, Amar; Bhandari, Subodh; Green, Robert L.

    2016-05-01

    Historically, investigation of turfgrass characteristics have been limited to visual ratings. Although relevant information may result from such evaluations, final inferences may be questionable because of the subjective nature in which the data is collected. Recent advances in computer vision techniques allow researchers to objectively measure turfgrass characteristics such as percent ground cover, turf color, and turf quality from the digital images. This paper focuses on developing a methodology for automated assessment of turfgrass quality from aerial images. Images of several turfgrass plots of varying quality were gathered using a camera mounted on an unmanned aerial vehicle. The quality of these plots were also evaluated based on visual ratings. The goal was to use the aerial images to generate quality evaluations on a regular basis for the optimization of water treatment. Aerial images are used to train a neural network so that appropriate features such as intensity, color, and texture of the turfgrass are extracted from these images. Neural network is a nonlinear classifier commonly used in machine learning. The output of the neural network trained model is the ratings of the grass, which is compared to the visual ratings. Currently, the quality and the color of turfgrass, measured as the greenness of the grass, are evaluated. The textures are calculated using the Gabor filter and co-occurrence matrix. Other classifiers such as support vector machines and simpler linear regression models such as Ridge regression and LARS regression are also used. The performance of each model is compared. The results show encouraging potential for using machine learning techniques for the evaluation of turfgrass quality and color.

  19. SPECT-series plot-programs for spectral data for the USC-3 computer system

    International Nuclear Information System (INIS)

    Kawarasaki, Yuuki

    1976-01-01

    The programs for spectral data plotting, SPECT- series, have been prepared for use in the USC-3 computer system. They are based on the Basic Plot-Subroutine Unit reported previously and used for plot-processing both γ-ray and TOF-spectra. Two programs can process continuously as many data as required, reading from a magnetic-tape file, being of the same format as that in the Magnetic-Tape Base System. Specification of the plot-processing is as follows: the programs can plot (1) any number of data as required on a sheet, (2) in either linear or logarithmic Y-axis scaling, (3) in the arbitrary channel region, and (4) with variable scale-factor. How to program is described in detail. Usage of the representative programs with example outputs is explained. Problems in the improvement of processing speed and utilization efficiency are also discussed. (auth.)

  20. Combining FIA plot data with topographic variables: Are precise locations needed?

    Science.gov (United States)

    Stephen P. Prisley; Huei-Jin Wang; Philip J Radtke; John Coulston

    2009-01-01

    Plot data from the USFS FIA program could be combined with terrain variables to attempt to explain how terrain characteristics influence forest growth, species composition, productivity, fire behavior, wildlife habitat, and other phenomena. While some types of analyses using FIA data have been shown to be insensitive to precision of plot locations, it has been...

  1. shinyCircos: an R/Shiny application for interactive creation of Circos plot.

    Science.gov (United States)

    Yu, Yiming; Ouyang, Yidan; Yao, Wen

    2018-04-01

    Creation of Circos plot is one of the most efficient approaches to visualize genomic data. However, the installation and use of existing tools to make Circos plot are challenging for users lacking of coding experiences. To address this issue, we developed an R/Shiny application shinyCircos, a graphical user interface for interactive creation of Circos plot. shinyCircos can be easily installed either on computers for personal use or on local or public servers to provide online use to the community. Furthermore, various types of Circos plots could be easily generated and decorated with simple mouse-click. shinyCircos and its manual are freely available at https://github.com/venyao/shinyCircos. shinyCircos is deployed at https://yimingyu.shinyapps.io/shinycircos/ and http://shinycircos.ncpgr.cn/ for online use. diana1983941@mail.hzau.edu.cn or yaowen@henau.edu.cn.

  2. Emotions induced by operatic music: psychophysiological effects of music, plot, and acting: a scientist's tribute to Maria Callas.

    Science.gov (United States)

    Balteş, Felicia Rodica; Avram, Julia; Miclea, Mircea; Miu, Andrei C

    2011-06-01

    Operatic music involves both singing and acting (as well as rich audiovisual background arising from the orchestra and elaborate scenery and costumes) that multiply the mechanisms by which emotions are induced in listeners. The present study investigated the effects of music, plot, and acting performance on emotions induced by opera. There were three experimental conditions: (1) participants listened to a musically complex and dramatically coherent excerpt from Tosca; (2) they read a summary of the plot and listened to the same musical excerpt again; and (3) they re-listened to music while they watched the subtitled film of this acting performance. In addition, a control condition was included, in which an independent sample of participants succesively listened three times to the same musical excerpt. We measured subjective changes using both dimensional, and specific music-induced emotion questionnaires. Cardiovascular, electrodermal, and respiratory responses were also recorded, and the participants kept track of their musical chills. Music listening alone elicited positive emotion and autonomic arousal, seen in faster heart rate, but slower respiration rate and reduced skin conductance. Knowing the (sad) plot while listening to the music a second time reduced positive emotions (peacefulness, joyful activation), and increased negative ones (sadness), while high autonomic arousal was maintained. Watching the acting performance increased emotional arousal and changed its valence again (from less positive/sad to transcendent), in the context of continued high autonomic arousal. The repeated exposure to music did not by itself induce this pattern of modifications. These results indicate that the multiple musical and dramatic means involved in operatic performance specifically contribute to the genesis of music-induced emotions and their physiological correlates. Copyright © 2011 Elsevier Inc. All rights reserved.

  3. Effects of pocket gopher burrowing on cesium-133 distribution on engineered test plots

    International Nuclear Information System (INIS)

    Gonzales, G.J.; Saladen, M.T.; Hakonson, T.E.

    1995-01-01

    Very low levels of radionuclides exist on soil surfaces. Biological factors including vegetation and animal burrowing can influence the fate of these surface contaminants. Animal burrowing introduces variability in radionuclide migration that confounds estimation of nuclide migration pathways, risk assessment, and assessment of waste burial performance. A field study on the surface and subsurface erosional transport of surface-applied 133 Cs as affected by pocket gopher (Thomomys bottae) burrowing was conducted on simulated waste landfill caps at the Los Alamos National Laboratory in north central New Mexico. Surface loss of Cs, adhered to five soil particle size ranges, was measured several times over an 18-mo period while simulated rainfalls were in progress. Gophers reduced Cs surface loss by significant amounts, 43%. Cesium surface loss on plots with only gophers was 0.8 kg totalled for the study period. This compared with 1.4 kg for control plots, 0.5 kg for vegetated plots, and 0.2 kg for plots with both gophers and vegetation. The change in Cs surface loss over time was significant (P -1 ). Vegetation-bearing plots bad significant more total subsurface Cs (μ = 1.7 g kg -1 ) than plots without vegetation (μ = 0.8 g kg -1 ). An average of 97% of the subsurface Cs in plots with vegetation was located in the upper 15 cm of soil (SDR1 + SDR2) compared with 67% for plots without vegetation. Vegetation moderated the influence of gopher activity on the transport of Cs to soil subsurface, and stabilized subsurface Cs by concentrating it in the rhizosphere. Gopher activity may have caused Cs transport to depths below that sampled, 30 cm. The results provide distribution coefficients for models of contaminant migration where animal burrowing occurs. 35 refs., 2 figs., 3 tabs

  4. Portable and Airborne Small Footprint LiDAR: Forest Canopy Structure Estimation of Fire Managed Plots

    Directory of Open Access Journals (Sweden)

    Claudia M.C.S. Listopad

    2011-06-01

    Full Text Available This study used an affordable ground-based portable LiDAR system to provide an understanding of the structural differences between old-growth and secondary-growth Southeastern pine. It provided insight into the strengths and weaknesses in the structural determination of portable systems in contrast to airborne LiDAR systems. Portable LiDAR height profiles and derived metrics and indices (e.g., canopy cover, canopy height were compared among plots with different fire frequency and fire season treatments within secondary forest and old growth plots. The treatments consisted of transitional season fire with four different return intervals: 1-yr, 2-yr, 3-yr fire return intervals, and fire suppressed plots. The remaining secondary plots were treated using a 2-yr late dormant season fire cycle. The old growth plots were treated using a 2-yr growing season fire cycle. Airborne and portable LiDAR derived canopy cover were consistent throughout the plots, with significantly higher canopy cover values found in 3-yr and fire suppressed plots. Portable LiDAR height profile and metrics presented a higher sensitivity in capturing subcanopy elements than the airborne system, particularly in dense canopy plots. The 3-dimensional structures of the secondary plots with varying fire return intervals were dramatically different to old-growth plots, where a symmetrical distribution with clear recruitment was visible. Portable LiDAR, even though limited to finer spatial scales and specific biases, is a low-cost investment with clear value for the management of forest canopy structure.

  5. Behavior of QQ-plots and genomic control in studies of gene-environment interaction.

    Directory of Open Access Journals (Sweden)

    Arend Voorman

    2011-05-01

    Full Text Available Genome-wide association studies of gene-environment interaction (GxE GWAS are becoming popular. As with main effects GWAS, quantile-quantile plots (QQ-plots and Genomic Control are being used to assess and correct for population substructure. However, in G x E work these approaches can be seriously misleading, as we illustrate; QQ-plots may give strong indications of substructure when absolutely none is present. Using simulation and theory, we show how and why spurious QQ-plot inflation occurs in G x E GWAS, and how this differs from main-effects analyses. We also explain how simple adjustments to standard regression-based methods used in G x E GWAS can alleviate this problem.

  6. Similarity-dissimilarity plot for visualization of high dimensional data in biomedical pattern classification.

    Science.gov (United States)

    Arif, Muhammad

    2012-06-01

    In pattern classification problems, feature extraction is an important step. Quality of features in discriminating different classes plays an important role in pattern classification problems. In real life, pattern classification may require high dimensional feature space and it is impossible to visualize the feature space if the dimension of feature space is greater than four. In this paper, we have proposed a Similarity-Dissimilarity plot which can project high dimensional space to a two dimensional space while retaining important characteristics required to assess the discrimination quality of the features. Similarity-dissimilarity plot can reveal information about the amount of overlap of features of different classes. Separable data points of different classes will also be visible on the plot which can be classified correctly using appropriate classifier. Hence, approximate classification accuracy can be predicted. Moreover, it is possible to know about whom class the misclassified data points will be confused by the classifier. Outlier data points can also be located on the similarity-dissimilarity plot. Various examples of synthetic data are used to highlight important characteristics of the proposed plot. Some real life examples from biomedical data are also used for the analysis. The proposed plot is independent of number of dimensions of the feature space.

  7. Sampling Error in Relation to Cyst Nematode Population Density Estimation in Small Field Plots.

    Science.gov (United States)

    Župunski, Vesna; Jevtić, Radivoje; Jokić, Vesna Spasić; Župunski, Ljubica; Lalošević, Mirjana; Ćirić, Mihajlo; Ćurčić, Živko

    2017-06-01

    Cyst nematodes are serious plant-parasitic pests which could cause severe yield losses and extensive damage. Since there is still very little information about error of population density estimation in small field plots, this study contributes to the broad issue of population density assessment. It was shown that there was no significant difference between cyst counts of five or seven bulk samples taken per each 1-m 2 plot, if average cyst count per examined plot exceeds 75 cysts per 100 g of soil. Goodness of fit of data to probability distribution tested with χ 2 test confirmed a negative binomial distribution of cyst counts for 21 out of 23 plots. The recommended measure of sampling precision of 17% expressed through coefficient of variation ( cv ) was achieved if the plots of 1 m 2 contaminated with more than 90 cysts per 100 g of soil were sampled with 10-core bulk samples taken in five repetitions. If plots were contaminated with less than 75 cysts per 100 g of soil, 10-core bulk samples taken in seven repetitions gave cv higher than 23%. This study indicates that more attention should be paid on estimation of sampling error in experimental field plots to ensure more reliable estimation of population density of cyst nematodes.

  8. Experts’ Misinterpretation of Box Plots – a Dual Processing Approach

    Directory of Open Access Journals (Sweden)

    Stephanie Lem

    2014-11-01

    Full Text Available Recent studies have shown that students often misinterpret the area of the box in box plots as representing the frequency or proportion of observations in that interval, while it actually represents density. This misinterpretation has been shown to be based on the saliency of this area and can be explained by heuristic reasoning as defined by dual process theories. In this study we tested whether expert users of box plots also display this misinterpretation and show signs of the same heuristic reasoning as found in students. Using a reaction time test, we found signs of heuristic reasoning in experts, both with respect to accuracy and reaction times. If even experts have difficulty interpreting box plots, one can question whether these are an appropriate form of representation to use when reporting data and deserve the prominent place they currently have in the statistics curriculum.

  9. Surveillance of Site A and Plot M report for 1991

    International Nuclear Information System (INIS)

    Golchert, N.W.

    1992-05-01

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for CY 1991 are presented. The surveillance program is the ongoing remedial action that resulted from the 1976--1978 radiological characterization of the site. That study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand-pumped picnic wells. The current program consists of sample collection and analysis of air, surface and subsurface water, and bottom sediment. The results of the analyses are used to (1) determine the migration pathway of water from the burial ground (Plot M) to the hand-pumped picnic wells, (2) establish if buried radionuclides other than hydrogen-3 have migrated, and (3) generally characterize the radiological environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Tritiated water continues to be detected in a number of wells, boreholes, dolomite holes, and surface stream. For many years it was the only radionclide found to have migrated in measurable quantities. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of borehole next to Plot M. The available data does not allow a firm conclusion as to whether the presence of this nuclide represents recent migration or movement that may have occurred before Plot M was capped. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site or those living in the vicinity

  10. Surveillance of Site A and Plot M. Report for 1996

    International Nuclear Information System (INIS)

    Golchert, N.W.

    1997-05-01

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for 1996 are presented. The surveillance program is the ongoing remedial action that resulted from the 1976-1978 radiological characterization of the site. That study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand-pumped picnic wells. The current program consists of sample collection and analysis of air, surface and subsurface water, and bottom sediment. The results of the analyses are used to (1) monitor the migration pathway of water from the burial ground (Plot M) to the hand-pumped picnic wells, (2) establish if buried radionuclides other than hydrogen-3 have migrated, and (3) generally characterize the radiological environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Tritiated water continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. For many years it was the only radionuclide found to have migrated in measurable quantities. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The available data does not allow a firm conclusion as to whether the presence of this nuclide represents recent migration or movement that may have occurred before Plot M was capped. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity

  11. Mars Science Laboratory Launch-Arrival Space Study: A Pork Chop Plot Analysis

    Science.gov (United States)

    Cianciolo, Alicia Dwyer; Powell, Richard; Lockwood, Mary Kae

    2006-01-01

    Launch-Arrival, or "pork chop", plot analysis can provide mission designers with valuable information and insight into a specific launch and arrival space selected for a mission. The study begins with the array of entry states for each pair of selected Earth launch and Mars arrival dates, and nominal entry, descent and landing trajectories are simulated for each pair. Parameters of interest, such as maximum heat rate, are plotted in launch-arrival space. The plots help to quickly identify launch and arrival regions that are not feasible under current constraints or technology and also provide information as to what technologies may need to be developed to reach a desired region. This paper provides a discussion of the development, application, and results of a pork chop plot analysis to the Mars Science Laboratory mission. This technique is easily applicable to other missions at Mars and other destinations.

  12. Variable Selection Strategies for Small-area Estimation Using FIA Plots and Remotely Sensed Data

    Science.gov (United States)

    Andrew Lister; Rachel Riemann; James Westfall; Mike Hoppus

    2005-01-01

    The USDA Forest Service's Forest Inventory and Analysis (FIA) unit maintains a network of tens of thousands of georeferenced forest inventory plots distributed across the United States. Data collected on these plots include direct measurements of tree diameter and height and other variables. We present a technique by which FIA plot data and coregistered...

  13. Crop residue decomposition in Minnesota biochar-amended plots

    Science.gov (United States)

    Weyers, S. L.; Spokas, K. A.

    2014-06-01

    Impacts of biochar application at laboratory scales are routinely studied, but impacts of biochar application on decomposition of crop residues at field scales have not been widely addressed. The priming or hindrance of crop residue decomposition could have a cascading impact on soil processes, particularly those influencing nutrient availability. Our objectives were to evaluate biochar effects on field decomposition of crop residue, using plots that were amended with biochars made from different plant-based feedstocks and pyrolysis platforms in the fall of 2008. Litterbags containing wheat straw material were buried in July of 2011 below the soil surface in a continuous-corn cropped field in plots that had received one of seven different biochar amendments or a uncharred wood-pellet amendment 2.5 yr prior to start of this study. Litterbags were collected over the course of 14 weeks. Microbial biomass was assessed in treatment plots the previous fall. Though first-order decomposition rate constants were positively correlated to microbial biomass, neither parameter was statistically affected by biochar or wood-pellet treatments. The findings indicated only a residual of potentially positive and negative initial impacts of biochars on residue decomposition, which fit in line with established feedstock and pyrolysis influences. Overall, these findings indicate that no significant alteration in the microbial dynamics of the soil decomposer communities occurred as a consequence of the application of plant-based biochars evaluated here.

  14. Crop residue decomposition in Minnesota biochar amended plots

    Science.gov (United States)

    Weyers, S. L.; Spokas, K. A.

    2014-02-01

    Impacts of biochar application at laboratory scales are routinely studied, but impacts of biochar application on decomposition of crop residues at field scales have not been widely addressed. The priming or hindrance of crop residue decomposition could have a cascading impact on soil processes, particularly those influencing nutrient availability. Our objectives were to evaluate biochar effects on field decomposition of crop residue, using plots that were amended with biochars made from different feedstocks and pyrolysis platforms prior to the start of this study. Litterbags containing wheat straw material were buried below the soil surface in a continuous-corn cropped field in plots that had received one of seven different biochar amendments or a non-charred wood pellet amendment 2.5 yr prior to start of this study. Litterbags were collected over the course of 14 weeks. Microbial biomass was assessed in treatment plots the previous fall. Though first-order decomposition rate constants were positively correlated to microbial biomass, neither parameter was statistically affected by biochar or wood-pellet treatments. The findings indicated only a residual of potentially positive and negative initial impacts of biochars on residue decomposition, which fit in line with established feedstock and pyrolysis influences. Though no significant impacts were observed with field-weathered biochars, effective soil management may yet have to account for repeat applications of biochar.

  15. Methodology of project management at implementation of projects of high-rise construction

    Science.gov (United States)

    Papelniuk, Oksana

    2018-03-01

    High-rise construction is the perspective direction in urban development. An opportunity to arrange on rather small land plot a huge number of the living and commercial space makes high-rise construction very attractive for developers. However investment projects of high-rise buildings' construction are very expensive and complex that sets a task of effective management of such projects for the company builder. The best tool in this area today is the methodology of project management, which becomes a key factor of efficiency.

  16. Multiscale Poincaré plots for visualizing the structure of heartbeat time series.

    Science.gov (United States)

    Henriques, Teresa S; Mariani, Sara; Burykin, Anton; Rodrigues, Filipa; Silva, Tiago F; Goldberger, Ary L

    2016-02-09

    Poincaré delay maps are widely used in the analysis of cardiac interbeat interval (RR) dynamics. To facilitate visualization of the structure of these time series, we introduce multiscale Poincaré (MSP) plots. Starting with the original RR time series, the method employs a coarse-graining procedure to create a family of time series, each of which represents the system's dynamics in a different time scale. Next, the Poincaré plots are constructed for the original and the coarse-grained time series. Finally, as an optional adjunct, color can be added to each point to represent its normalized frequency. We illustrate the MSP method on simulated Gaussian white and 1/f noise time series. The MSP plots of 1/f noise time series reveal relative conservation of the phase space area over multiple time scales, while those of white noise show a marked reduction in area. We also show how MSP plots can be used to illustrate the loss of complexity when heartbeat time series from healthy subjects are compared with those from patients with chronic (congestive) heart failure syndrome or with atrial fibrillation. This generalized multiscale approach to Poincaré plots may be useful in visualizing other types of time series.

  17. Diffusional falsification of kinetic constants on Lineweaver-Burk plots.

    Science.gov (United States)

    Ghim, Y S; Chang, H N

    1983-11-07

    The effect of mass transfer resistances on the Lineweaver-Burk plots in immobilized enzyme systems has been investigated numerically and with analytical approximate solutions. While Hamilton, Gardner & Colton (1974) studied the effect of internal diffusion resistances in planar geometry, our study was extended to the combined effect of internal and external diffusion in cylindrical and spherical geometries as well. The variation of Lineweaver-Burk plots with respect to the geometries was minimized by modifying the Thiele modulus and the Biot number with the shape factor. Especially for a small Biot number all the three Lineweaver-Burk plots fell on a single line. As was discussed by Hamilton et al. (1974), the curvature of the line for large external diffusion resistances was small enough to be assumed linear, which was confirmed from the two approximate solutions for large and small substrate concentrations. Two methods for obtaining intrinsic kinetic constants were proposed: First, we obtained both maximum reaction rate and Michaelis constant by fitting experimental data to a straight line where external diffusion resistance was relatively large, and second, we obtained Michaelis constant from apparent Michaelis constant from the figure in case we knew maximum reaction rate a priori.

  18. Looking at large data sets using binned data plots

    Energy Technology Data Exchange (ETDEWEB)

    Carr, D.B.

    1990-04-01

    This report addresses the monumental challenge of developing exploratory analysis methods for large data sets. The goals of the report are to increase awareness of large data sets problems and to contribute simple graphical methods that address some of the problems. The graphical methods focus on two- and three-dimensional data and common task such as finding outliers and tail structure, assessing central structure and comparing central structures. The methods handle large sample size problems through binning, incorporate information from statistical models and adapt image processing algorithms. Examples demonstrate the application of methods to a variety of publicly available large data sets. The most novel application addresses the too many plots to examine'' problem by using cognostics, computer guiding diagnostics, to prioritize plots. The particular application prioritizes views of computational fluid dynamics solution sets on the fly. That is, as each time step of a solution set is generated on a parallel processor the cognostics algorithms assess virtual plots based on the previous time step. Work in such areas is in its infancy and the examples suggest numerous challenges that remain. 35 refs., 15 figs.

  19. A user's guide of a plotting program PLTJOINT

    International Nuclear Information System (INIS)

    Sasaki, Makoto; Sato, Wakaei; Nakagawa, Masayuki; Mori, Takamasa

    1988-02-01

    A plotting program PLTJOINT is able to plot various types of input and output data from neutronics calculations with two dimensional coordinates. These data include cross sections, neutron flux or spectrum, reaction rate distribution and auxiliary data. These are read from the input and output files of the JOINT system and the transport code system using double differential form cross section, and from arbitrary BCD input file. General purpose option is also available. Much care is taken in lettering such as types of characters (italic, Greek letters and characters), super and subscript of alphabet and numeral. Users can design their own characters by using a program IGDRASIL. Most of input data can be read in free format. The code has been programed so flexibly that new functions can be easily added to. (author)

  20. Uniqueness plots: A simple graphical tool for identifying poor peak fits in X-ray photoelectron spectroscopy

    International Nuclear Information System (INIS)

    Singh, Bhupinder; Diwan, Anubhav; Jain, Varun; Herrera-Gomez, Alberto; Terry, Jeff; Linford, Matthew R.

    2016-01-01

    Highlights: • Uniqueness plots are introduced as a new tool for identifying poor XPS peak fits. • Uniqueness plots are demonstrated on real XPS data sets. • A horizontal line in a uniqueness plot indicates a poor fit, i.e., fit parameter correlation. • A parabolic shape in a uniqueness plot indicates that a fit may be appropriate. - Abstract: Peak fitting is an essential part of X-ray photoelectron spectroscopy (XPS) narrow scan analysis, and the Literature contains both good and bad examples of peak fitting. A common cause of poor peak fitting is the inclusion of too many fit parameters, often without a sound chemical and/or physical basis for them, and/or the failure to reasonably constrain them. Under these conditions, fit parameters are often correlated, and therefore lacking in statistical meaning. Here we introduce the uniqueness plot as a simple graphical tool for identifying bad peak fits in XPS, i.e., fit parameter correlation. These plots are widely used in spectroscopic ellipsometry. We illustrate uniqueness plots with two data sets: a C 1s narrow scan from ozone-treated carbon nanotube forests and an Si 2p narrow scan from an air-oxidized silicon wafer. For each fit, we consider different numbers of parameters and constraints on them. As expected, the uniqueness plots are parabolic when fewer fit parameters and/or more constraints are applied. However, they fan out and eventually become horizontal lines as more unconstrained parameters are included in the fits. Uniqueness plots are generated by plotting the chi squared (χ 2 ) value for a fit vs. a systematically varied value of a parameter in the fit. The Abbe criterion is also considered as a figure of merit for uniqueness plots in the Supporting Information. We recommend that uniqueness plots be used by XPS practitioners for identifying inappropriate peak fits.

  1. Uniqueness plots: A simple graphical tool for identifying poor peak fits in X-ray photoelectron spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Singh, Bhupinder; Diwan, Anubhav; Jain, Varun [Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT, 84606 (United States); Herrera-Gomez, Alberto [CINVESTAV-Unidad Queretaro, Queretaro, 76230 (Mexico); Terry, Jeff [Department of Physics, Illinois Institute of Technology, Chicago, IL, 60616 (United States); Linford, Matthew R., E-mail: mrlinford@chem.byu.edu [Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT, 84606 (United States)

    2016-11-30

    Highlights: • Uniqueness plots are introduced as a new tool for identifying poor XPS peak fits. • Uniqueness plots are demonstrated on real XPS data sets. • A horizontal line in a uniqueness plot indicates a poor fit, i.e., fit parameter correlation. • A parabolic shape in a uniqueness plot indicates that a fit may be appropriate. - Abstract: Peak fitting is an essential part of X-ray photoelectron spectroscopy (XPS) narrow scan analysis, and the Literature contains both good and bad examples of peak fitting. A common cause of poor peak fitting is the inclusion of too many fit parameters, often without a sound chemical and/or physical basis for them, and/or the failure to reasonably constrain them. Under these conditions, fit parameters are often correlated, and therefore lacking in statistical meaning. Here we introduce the uniqueness plot as a simple graphical tool for identifying bad peak fits in XPS, i.e., fit parameter correlation. These plots are widely used in spectroscopic ellipsometry. We illustrate uniqueness plots with two data sets: a C 1s narrow scan from ozone-treated carbon nanotube forests and an Si 2p narrow scan from an air-oxidized silicon wafer. For each fit, we consider different numbers of parameters and constraints on them. As expected, the uniqueness plots are parabolic when fewer fit parameters and/or more constraints are applied. However, they fan out and eventually become horizontal lines as more unconstrained parameters are included in the fits. Uniqueness plots are generated by plotting the chi squared (χ{sup 2}) value for a fit vs. a systematically varied value of a parameter in the fit. The Abbe criterion is also considered as a figure of merit for uniqueness plots in the Supporting Information. We recommend that uniqueness plots be used by XPS practitioners for identifying inappropriate peak fits.

  2. Methodological Behaviorism from the Standpoint of a Radical Behaviorist.

    Science.gov (United States)

    Moore, J

    2013-01-01

    Methodological behaviorism is the name for a prescriptive orientation to psychological science. Its first and original feature is that the terms and concepts deployed in psychological theories and explanations should be based on observable stimuli and behavior. I argue that the interpretation of the phrase "based on" has changed over the years because of the influence of operationism. Its second feature, which developed after the first and is prominent in contemporary psychology, is that research should emphasize formal testing of a theory that involves mediating theoretical entities from an nonbehavioral dimension according to the hypothetico-deductive method. I argue that for contemporary methodological behaviorism, explanations of the behavior of both participants and scientists appeal to the mediating entities as mental causes, if only indirectly. In contrast to methodological behaviorism is the radical behaviorism of B. F. Skinner. Unlike methodological behaviorism, radical behaviorism conceives of verbal behavior in terms of an operant process that involves antecedent circumstances and reinforcing consequences, rather than in terms of a nonbehavioral process that involves reference and symbolism. In addition, radical behaviorism recognizes private behavioral events and subscribes to research and explanatory practices that do not include testing hypotheses about supposed mediating entities from another dimension. I conclude that methodological behaviorism is actually closer to mentalism than to Skinner's radical behaviorism.

  3. The Zombie Plot: A Simple Graphic Method for Visualizing the Efficacy of a Diagnostic Test.

    Science.gov (United States)

    Richardson, Michael L

    2016-08-09

    One of the most important jobs of a radiologist is to pick the most appropriate imaging test for a particular clinical situation. Making a proper selection sometimes requires statistical analysis. The objective of this article is to introduce a simple graphic technique, an ROC plot that has been divided into zones of mostly bad imaging efficacy (ZOMBIE, hereafter referred to as the "zombie plot"), that transforms information about imaging efficacy from the numeric domain into the visual domain. The numeric rationale for the use of zombie plots is given, as are several examples of the clinical use of these plots. Two online calculators are described that simplify the process of producing a zombie plot.

  4. Comparative study on software development methodologies

    OpenAIRE

    Mihai Liviu DESPA

    2014-01-01

    This paper focuses on the current state of knowledge in the field of software development methodologies. It aims to set the stage for the formalization of a software development methodology dedicated to innovation orientated IT projects. The paper starts by depicting specific characteristics in software development project management. Managing software development projects involves techniques and skills that are proprietary to the IT industry. Also the software development project manager han...

  5. Patients at the centre: methodological considerations for evaluating evidence from health interventions involving patients use of web-based information systems.

    Science.gov (United States)

    Cummings, Elizabeth; Turner, Paul

    2010-09-15

    Building an evidence base for healthcare interventions has long been advocated as both professionally and ethically desirable. By supporting meaningful comparison amongst different approaches, a good evidence base has been viewed as an important element in optimising clinical decision-making and the safety and quality of care. Unsurprisingly, medical research has put considerable effort into supporting the development of this evidence base, and the randomised controlled trial has become the dominant methodology. Recently however, a body of research has begun to question, not just this methodology per se, but also the extent to which the evidence it produces may marginalise individual patient experiences, priorities and perceptions.Simultaneously, the widespread adoption and utilisation of information systems (IS) in health care has also prompted initiatives to develop a stronger base of evidence about their impacts. These calls have been stimulated both by numerous system failures and research expressing concerns about the limitations of information systems methodologies in health care environments. Alongside the potential of information systems to produce positive, negative and unintended consequences, many measures of success, impact or benefit appear to have little to do with improvements in care, health outcomes or individual patient experiences.Combined these methodological concerns suggest the need for more detailed examination. This is particularly the case, given the prevalence within contemporary clinical and IS discourses on health interventions advocating the need to put the 'patient at the centre' by engaging them in their own care and/or 'empowering' them through the use of information systems.This paper aims to contribute to these on-going debates by focusing on the socio-technical processes by which patients' interests and outcomes are measured, defined and evaluated within health interventions that involve them using web-based information systems

  6. Patients at the Centre: Methodological Considerations for Evaluating Evidence from Health Interventions Involving Patients Use of Web-Based Information Systems

    Science.gov (United States)

    Cummings, Elizabeth; Turner, Paul

    2010-01-01

    Building an evidence base for healthcare interventions has long been advocated as both professionally and ethically desirable. By supporting meaningful comparison amongst different approaches, a good evidence base has been viewed as an important element in optimising clinical decision-making and the safety and quality of care. Unsurprisingly, medical research has put considerable effort into supporting the development of this evidence base, and the randomised controlled trial has become the dominant methodology. Recently however, a body of research has begun to question, not just this methodology per se, but also the extent to which the evidence it produces may marginalise individual patient experiences, priorities and perceptions. Simultaneously, the widespread adoption and utilisation of information systems (IS) in health care has also prompted initiatives to develop a stronger base of evidence about their impacts. These calls have been stimulated both by numerous system failures and research expressing concerns about the limitations of information systems methodologies in health care environments. Alongside the potential of information systems to produce positive, negative and unintended consequences, many measures of success, impact or benefit appear to have little to do with improvements in care, health outcomes or individual patient experiences. Combined these methodological concerns suggest the need for more detailed examination. This is particularly the case, given the prevalence within contemporary clinical and IS discourses on health interventions advocating the need to put the ‘patient at the centre’ by engaging them in their own care and/or ‘empowering’ them through the use of information systems. This paper aims to contribute to these on-going debates by focusing on the socio-technical processes by which patients’ interests and outcomes are measured, defined and evaluated within health interventions that involve them using web

  7. D-GENIES: dot plot large genomes in an interactive, efficient and simple way.

    Science.gov (United States)

    Cabanettes, Floréal; Klopp, Christophe

    2018-01-01

    Dot plots are widely used to quickly compare sequence sets. They provide a synthetic similarity overview, highlighting repetitions, breaks and inversions. Different tools have been developed to easily generated genomic alignment dot plots, but they are often limited in the input sequence size. D-GENIES is a standalone and web application performing large genome alignments using minimap2 software package and generating interactive dot plots. It enables users to sort query sequences along the reference, zoom in the plot and download several image, alignment or sequence files. D-GENIES is an easy-to-install, open-source software package (GPL) developed in Python and JavaScript. The source code is available at https://github.com/genotoul-bioinfo/dgenies and it can be tested at http://dgenies.toulouse.inra.fr/.

  8. EcoIS: An image serialization library for plot-based plant flowering phenology

    DEFF Research Database (Denmark)

    Granados, Joel A.; Bonnet, Philippe; Hansen, Lars Hostrup

    2013-01-01

    they are produced by introducing an open source Python (www.python.org) library called EcoIS that creates image series from unaligned pictures of specially equipped plots. We use EcoIS to sample flowering phenology plots in a high arctic environment and create image series that later generate phenophase counts...

  9. Methodology for astronaut reconditioning research.

    Science.gov (United States)

    Beard, David J; Cook, Jonathan A

    2017-01-01

    Space medicine offers some unique challenges, especially in terms of research methodology. A specific challenge for astronaut reconditioning involves identification of what aspects of terrestrial research methodology hold and which require modification. This paper reviews this area and presents appropriate solutions where possible. It is concluded that spaceflight rehabilitation research should remain question/problem driven and is broadly similar to the terrestrial equivalent on small populations, such as rare diseases and various sports. Astronauts and Medical Operations personnel should be involved at all levels to ensure feasibility of research protocols. There is room for creative and hybrid methodology but careful systematic observation is likely to be more achievable and fruitful than complex trial based comparisons. Multi-space agency collaboration will be critical to pool data from small groups of astronauts with the accepted use of standardised outcome measures across all agencies. Systematic reviews will be an essential component. Most limitations relate to the inherent small sample size available for human spaceflight research. Early adoption of a co-operative model for spaceflight rehabilitation research is therefore advised. Copyright © 2016 Elsevier Ltd. All rights reserved.

  10. Fitting diameter distribution models to data from forest inventories with concentric plot design

    Directory of Open Access Journals (Sweden)

    Nikos Nanos

    2017-10-01

    Research highlights:We designed a new method to fit the Weibull distribution to forest inventory data from concentric plots that achieves high accuracy and precision in parameter estimates regardless of the within-plot spatial tree pattern.

  11. Effects of disease severity distribution on the performance of quantitative diagnostic methods and proposal of a novel ‘V-plot’ methodology to display accuracy values

    Science.gov (United States)

    Dehbi, Hakim-Moulay; Howard, James P; Shun-Shin, Matthew J; Sen, Sayan; Nijjer, Sukhjinder S; Mayet, Jamil; Davies, Justin E; Francis, Darrel P

    2018-01-01

    Background Diagnostic accuracy is widely accepted by researchers and clinicians as an optimal expression of a test’s performance. The aim of this study was to evaluate the effects of disease severity distribution on values of diagnostic accuracy as well as propose a sample-independent methodology to calculate and display accuracy of diagnostic tests. Methods and findings We evaluated the diagnostic relationship between two hypothetical methods to measure serum cholesterol (Cholrapid and Cholgold) by generating samples with statistical software and (1) keeping the numerical relationship between methods unchanged and (2) changing the distribution of cholesterol values. Metrics of categorical agreement were calculated (accuracy, sensitivity and specificity). Finally, a novel methodology to display and calculate accuracy values was presented (the V-plot of accuracies). Conclusion No single value of diagnostic accuracy can be used to describe the relationship between tests, as accuracy is a metric heavily affected by the underlying sample distribution. Our novel proposed methodology, the V-plot of accuracies, can be used as a sample-independent measure of a test performance against a reference gold standard. PMID:29387424

  12. The hexagon/panel system for selecting FIA plots under an annual inventory

    Science.gov (United States)

    Gary J. Brand; Mark D. Nelson; Daniel G. Wendt; Kevin K. Nimerfro

    2000-01-01

    Forest Inventory and Analysis (FIA) is changing to an annual nationwide forest inventory. This paper describes the sampling grid used to distribute FIA plots across the landscape and to allocate them to a particular measurement year. We also describe the integration of the F1A and Forest Health Monitoring (FHM) plot networks.

  13. Automatic Classification of Station Quality by Image Based Pattern Recognition of Ppsd Plots

    Science.gov (United States)

    Weber, B.; Herrnkind, S.

    2017-12-01

    The number of seismic stations is growing and it became common practice to share station waveform data in real-time with the main data centers as IRIS, GEOFON, ORFEUS and RESIF. This made analyzing station performance of increasing importance for automatic real-time processing and station selection. The value of a station depends on different factors as quality and quantity of the data, location of the site and general station density in the surrounding area and finally the type of application it can be used for. The approach described by McNamara and Boaz (2006) became standard in the last decade. It incorporates a probability density function (PDF) to display the distribution of seismic power spectral density (PSD). The low noise model (LNM) and high noise model (HNM) introduced by Peterson (1993) are also displayed in the PPSD plots introduced by McNamara and Boaz allowing an estimation of the station quality. Here we describe how we established an automatic station quality classification module using image based pattern recognition on PPSD plots. The plots were split into 4 bands: short-period characteristics (0.1-0.8 s), body wave characteristics (0.8-5 s), microseismic characteristics (5-12 s) and long-period characteristics (12-100 s). The module sqeval connects to a SeedLink server, checks available stations, requests PPSD plots through the Mustang service from IRIS or PQLX/SQLX or from GIS (gempa Image Server), a module to generate different kind of images as trace plots, map plots, helicorder plots or PPSD plots. It compares the image based quality patterns for the different period bands with the retrieved PPSD plot. The quality of a station is divided into 5 classes for each of the 4 bands. Classes A, B, C, D define regular quality between LNM and HNM while the fifth class represents out of order stations with gain problems, missing data etc. Over all period bands about 100 different patterns are required to classify most of the stations available on the

  14. The PLOT (Paleolimnological Transect) Project in the Russian Arctic

    Science.gov (United States)

    Gromig, R.; Andreev, A.; Baumer, M.; Bolshiyanov, D.; Fedorov, G.; Frolova, L.; Krastel, S.; Lebas, E.; Ludikova, A.; Melles, M.; Meyer, H.; Nazarova, L.; Pestryakova, L.; Savelieva, L.; Shumilovskikh, L.; Subetto, D.; Wagner, B.; Wennrich, V.

    2017-12-01

    The joint Russian- German project 'PLOT - Paleolimnological Transec' aims to recover lake sediment sequences along a >6000 km long longitudinal transect across the Eurasian Arctic in order to investigate the Late Quaternary climatic and environmental history. The climate history of the Arctic is of particular interest since it is the region, which is experiencing major impact of the current climate change. The project is funded for three years (2015-2018) by the Russian and German Ministries of Research. Since 2013 extensive fieldwork, including seismic surveys, coring, and hydrological investigations, was carried out at lakes Ladoga (NW Russia, pilot study), Bolshoye Shuchye (Polar Urals), Emanda (Verkhoyansk Range, field campaign planned for August 2017), Levinson-Lessing and Taymyr (Taymyr Peninsula). Fieldwork at lakes Bolshoye Shuchye, Levinson-Lessing and Taymyr was conducted in collaboration with the Russian-Norwegian CHASE (Climate History along the Arctic Seaboard of Eurasia) project. A major objective of the PLOT project was to recover preglacial sediments. A multiproxy approach was applied to the analytical work of all cores, including (bio-)geochemical, sedimentological, geophysical, and biological analyses. First data implies the presence of preglacial sediments in the cores from all lakes so far visited. Age-depth models, based on radiocarbon dating, OSL dating, paleomagnetic measurements, identification of cryptotephra, and varve counting (where applicable), are in progress. Climate variability in the records shall be compared to that recorded at Lake Eĺgygytgyn (NE Russia), which represents the master record for the Siberian Arctic. The outcome of the PLOT project will be a better understanding of the temporal and spatial variability and development of the Arctic climate. Here, we present the major results and first key interpretations of the PLOT project, along with an outlook on the future strategy and foci. First results from lakes Ladoga

  15. Validity of the t-plot method to assess microporosity in hierarchical micro/mesoporous materials.

    Science.gov (United States)

    Galarneau, Anne; Villemot, François; Rodriguez, Jeremy; Fajula, François; Coasne, Benoit

    2014-11-11

    The t-plot method is a well-known technique which allows determining the micro- and/or mesoporous volumes and the specific surface area of a sample by comparison with a reference adsorption isotherm of a nonporous material having the same surface chemistry. In this paper, the validity of the t-plot method is discussed in the case of hierarchical porous materials exhibiting both micro- and mesoporosities. Different hierarchical zeolites with MCM-41 type ordered mesoporosity are prepared using pseudomorphic transformation. For comparison, we also consider simple mechanical mixtures of microporous and mesoporous materials. We first show an intrinsic failure of the t-plot method; this method does not describe the fact that, for a given surface chemistry and pressure, the thickness of the film adsorbed in micropores or small mesopores (plot method to estimate the micro- and mesoporous volumes of hierarchical samples is then discussed, and an abacus is given to correct the underestimated microporous volume by the t-plot method.

  16. The Chymistry of "The Learned Dr Plot" (1640-96).

    Science.gov (United States)

    Roos, Anna Marie

    2014-01-01

    In the seventeenth century, there were developing norms of openness in the presentation of scientific knowledge that were at odds with traditions of secrecy among chymists, particularly practitioners of chrysopoeia, or the transmutation of metals. This chapter analyzes how Dr. Robert Plot, the first professor of chymistry at Oxford, negotiated these boundaries within an institutional context. I first delineate his chymical and experimental practice, which incorporated procedures from medieval alchemical sources, particularly the Lullian corpus, as well as more novel practices from seventeenth-century chymistry. Then, I analyze how personal and institutional ambitions and economic considerations shaped to what extent Plot negotiated the boundaries between secrecy and the public dissemination of chymical knowledge.

  17. [Murderers in white coats--the physicians' plot against Stalin].

    Science.gov (United States)

    Olsen, B

    1997-12-10

    During the Moscow trials in 1936-38 several doctors were sentenced for participating in the murders of party leaders. As others who were accused, the doctors willingly confessed to crimes they could not possibly have committed. A second doctors' plot took place in the autumn of 1952. This time nine doctors, six of them Jews, were arrested for the attempted murder of political leaders. Only the unexpected death of Josef Stalin prevented a new wave of terror. With the single exception of Genrikh Grigorjevitsj Jagoda (1891-1938), head of the NKVD (KGB's predecessor), all those sentenced under the Moscow process are now rehabilitated. The participants of the second doctors' plot were rehabilitated immediately after Stalin's death.

  18. NUSAM Methodology for Assessment.

    Energy Technology Data Exchange (ETDEWEB)

    Leach, Janice [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Snell, Mark K. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2016-07-01

    This document provides a methodology for the performance-based assessment of security systems designed for the protection of nuclear and radiological materials and the processes that produce and/or involve them. It is intended for use with both relatively simple installations and with highly regulated complex sites with demanding security requirements.

  19. Including the Tukey Mean-Difference (Bland-Altman) Plot in a Statistics Course

    Science.gov (United States)

    Kozak, Marcin; Wnuk, Agnieszka

    2014-01-01

    The Tukey mean-difference plot, also called the Bland-Altman plot, is a recognized graphical tool in the exploration of biometrical data. We show that this technique deserves a place on an introductory statistics course by encouraging students to think about the kind of graph they wish to create, rather than just creating the default graph for the…

  20. Impact of animal waste application on runoff water quality in field experimental plots.

    Science.gov (United States)

    Hill, Dagne D; Owens, William E; Tchoounwou, Paul B

    2005-08-01

    Animal waste from dairy and poultry operations is an economical and commonly used fertilizer in the state of Louisiana. The application of animal waste to pasture lands not only is a source of fertilizer, but also allows for a convenient method of waste disposal. The disposal of animal wastes on land is a potential nonpoint source of water degradation. Water degradation and human health is a major concern when considering the disposal of large quantities of animal waste. The objective of this research was to determine the effect of animal waste application on biological (fecal coliform, Enterobacter spp. and Escherichia coli) and physical/chemical (temperature, pH, nitrate nitrogen, ammonia nitrogen, phosphate, copper, zinc, and sulfate) characteristics of runoff water in experimental plots. The effects of the application of animal waste have been evaluated by utilizing experimental plots and simulated rainfall events. Samples of runoff water were collected and analyzed for fecal coliforms. Fecal coliforms isolated from these samples were identified to the species level. Chemical analysis was performed following standard test protocols. An analysis of temperature, ammonia nitrogen, nitrate nitrogen, iron, copper, phosphate, potassium, sulfate, zinc and bacterial levels was performed following standard test protocols as presented in Standard Methods for the Examination of Water and Wastewater [1]. In the experimental plots, less time was required in the tilled broiler litter plots for the measured chemicals to decrease below the initial pre-treatment levels. A decrease of over 50% was noted between the first and second rainfall events for sulfate levels. This decrease was seen after only four simulated rainfall events in tilled broiler litter plots whereas broiler litter plots required eight simulated rainfall events to show this same type of reduction. A reverse trend was seen in the broiler litter plots and the tilled broiler plots for potassium. Bacteria numbers

  1. Robust reconstruction of a signal from its unthresholded recurrence plot subject to disturbances

    Energy Technology Data Exchange (ETDEWEB)

    Sipers, Aloys, E-mail: aloys.sipers@zuyd.nl [Department of Bèta Sciences and Technology, Zuyd University (Netherlands); Borm, Paul, E-mail: paul.borm@zuyd.nl [Department of Bèta Sciences and Technology, Zuyd University (Netherlands); Peeters, Ralf, E-mail: ralf.peeters@maastrichtuniversity.nl [Department of Data Science and Knowledge Engineering, Maastricht University (Netherlands)

    2017-02-12

    To make valid inferences from recurrence plots for time-delay embedded signals, two underlying key questions are: (1) to what extent does an unthresholded recurrence (URP) plot carry the same information as the signal that generated it, and (2) how does the information change when the URP gets distorted. We studied the first question in our earlier work , where it was shown that the URP admits the reconstruction of the underlying signal (up to its mean and a choice of sign) if and only if an associated graph is connected. Here we refine this result and we give an explicit condition in terms of the embedding parameters and the discrete Fourier spectrum of the URP. We also develop a method for the reconstruction of the underlying signal which overcomes several drawbacks that earlier approaches had. To address the second question we investigate robustness of the proposed reconstruction method under disturbances. We carry out two simulation experiments which are characterized by a broad band and a narrow band spectrum respectively. For each experiment we choose a noise level and two different pairs of embedding parameters. The conventional binary recurrence plot (RP) is obtained from the URP by thresholding and zero-one conversion, which can be viewed as severe distortion acting on the URP. Typically the reconstruction of the underlying signal from an RP is expected to be rather inaccurate. However, by introducing the concept of a multi-level recurrence plot (MRP) we propose to bridge the information gap between the URP and the RP, while still achieving a high data compression rate. We demonstrate the working of the proposed reconstruction procedure on MRPs, indicating that MRPs with just a few discretization levels can usually capture signal properties and morphologies more accurately than conventional RPs. - Highlights: • A recurrence plot is maximally informative if and only if the corresponding graph is connected. • The diameter of the connected graph is always

  2. Optimization of nutritional and non-nutritional factors involved for production of antimicrobial compounds from Lactobacillus pentosus SJ65 using response surface methodology

    Directory of Open Access Journals (Sweden)

    Appukuttan Saraniya

    2014-01-01

    Full Text Available Bacteriocins from lactic acid bacteria are ribosomal synthesized antibacterial proteins/ peptides having wide range of applications. Lactobacillus pentosus SJ65, isolated from fermented Uttapam batter (used to prepare south Indian pan cake, produces bacteriocin having a broad spectrum of activity against pathogens. Optimization studies are of utmost important to understand the source of utilization and the conditions to enhance the production of metabolites. In the present study, an attempt was made to identify the parameters involved for maximal production of antimicrobial compounds especially bacteriocin from the isolate L. pentosus SJ65. Initially, optimal conditions, such as incubation period, pH, and temperature were evaluated. Initial screening was done using methodology onevariable-at-a-time (OVAT for various carbon and nitrogen sources. Further evaluation was carried out statistically using Plackett-Burman design and the variables were analyzed using response surface methodology using central composite design. The optimum media using tryptone or soy peptone, yeast extract, glucose, triammonium citrate, MnSO4, dipotassium hydrogen phosphate and tween 80 produced maximum bacteriocin activity.

  3. Reproducibility Between Brain Uptake Ratio Using Anatomic Standardization and Patlak-Plot Methods.

    Science.gov (United States)

    Shibutani, Takayuki; Onoguchi, Masahisa; Noguchi, Atsushi; Yamada, Tomoki; Tsuchihashi, Hiroko; Nakajima, Tadashi; Kinuya, Seigo

    2015-12-01

    The Patlak-plot and conventional methods of determining brain uptake ratio (BUR) have some problems with reproducibility. We formulated a method of determining BUR using anatomic standardization (BUR-AS) in a statistical parametric mapping algorithm to improve reproducibility. The objective of this study was to demonstrate the inter- and intraoperator reproducibility of mean cerebral blood flow as determined using BUR-AS in comparison to the conventional-BUR (BUR-C) and Patlak-plot methods. The images of 30 patients who underwent brain perfusion SPECT were retrospectively used in this study. The images were reconstructed using ordered-subset expectation maximization and processed using an automatic quantitative analysis for cerebral blood flow of ECD tool. The mean SPECT count was calculated from axial basal ganglia slices of the normal side (slices 31-40) drawn using a 3-dimensional stereotactic region-of-interest template after anatomic standardization. The mean cerebral blood flow was calculated from the mean SPECT count. Reproducibility was evaluated using coefficient of variation and Bland-Altman plotting. For both inter- and intraoperator reproducibility, the BUR-AS method had the lowest coefficient of variation and smallest error range about the Bland-Altman plot. Mean CBF obtained using the BUR-AS method had the highest reproducibility. Compared with the Patlak-plot and BUR-C methods, the BUR-AS method provides greater inter- and intraoperator reproducibility of cerebral blood flow measurement. © 2015 by the Society of Nuclear Medicine and Molecular Imaging, Inc.

  4. Surveillance of Site A and Plot M, Report for 2008.

    Energy Technology Data Exchange (ETDEWEB)

    Golchert, N. W.

    2009-05-07

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for Calendar Year 2008 are presented. Based on the results of the 1976-1978 radiological characterization of the site, a determination was made that a surveillance program be established. The characterization study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand pumped picnic wells. The current surveillance program began in 1980 and consists of sample collection and analysis of surface and subsurface water. The results of the analyses are used to (1) monitor the migration pathway of hydrogen-3 contaminated water from the burial ground (Plot M) to the hand-pumped picnic wells, (2) establish if other buried radionuclides have migrated, and (3) monitor for the presence of radioactive materials in the environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Hydrogen-3 continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity.

  5. Surveillance of Site A and Plot M, Report for 2009.

    Energy Technology Data Exchange (ETDEWEB)

    Golchert, N. W.

    2010-04-21

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for Calendar Year 2009 are presented. Based on the results of the 1976-1978 radiological characterization of the site, a determination was made that a surveillance program be established. The characterization study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand-pumped picnic wells. The current surveillance program began in 1980 and consists of sample collection and analysis of surface and subsurface water. The results of the analyses are used to monitor the migration pathway of hydrogen-3 contaminated water from the burial ground (Plot M) to the hand-pumped picnic wells and monitor for the presence of radioactive materials in the environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Hydrogen-3 continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity.

  6. Surveillance of Site A and Plot M report for 2010.

    Energy Technology Data Exchange (ETDEWEB)

    Golchert, N. W. (ESQ)

    2011-05-31

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for Calendar Year 2010 are presented. Based on the results of the 1976-1978 radiological characterization of the site, a determination was made that a surveillance program be established. The characterization study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand-pumped picnic wells. The current surveillance program began in 1980 and consists of sample collection and analysis of surface and subsurface water. The results of the analyses are used to monitor the migration pathway of hydrogen-3 contaminated water from the burial ground (Plot M) to the hand-pumped picnic wells and monitor for the presence of radioactive materials in the environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Hydrogen-3 continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity.

  7. Surveillance of site A and plot M, report for 2007.

    Energy Technology Data Exchange (ETDEWEB)

    Golchert, N. W.; ESH/QA Oversight

    2008-03-25

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for Calendar Year 2007 are presented. Based on the results of the 1976-1978 radiological characterization of the site, a determination was made that a surveillance program be established. The characterization study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand pumped picnic wells. The current surveillance program began in 1980 and consists of sample collection and analysis of surface and subsurface water. The results of the analyses are used to: (1) monitor the migration pathway of water from the burial ground (Plot M) to the hand-pumped picnic wells, (2) establish if other buried radionuclides have migrated, and (3) monitor the presence of radioactive materials in the environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Hydrogen-3 continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity.

  8. Surveillance of Site A and Plot M - Report for 2006.

    Energy Technology Data Exchange (ETDEWEB)

    Golchert, N. W.; ESH/QA Oversight

    2007-05-07

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for Calendar Year 2006 are presented. Based on the results of the 1976-1978 radiological characterization of the site, a determination was made that a surveillance program be established. The characterization study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand-pumped picnic wells. The current surveillance program began in 1980 and consists of sample collection and analysis of surface and subsurface water. The results of the analyses are used to (1) monitor the migration pathway of water from the burial ground (PlotM) to the hand pumped picnic wells, (2) establish if buried radionuclides other than hydrogen-3 have migrated, and (3) monitor the presence of radioactive and chemically hazardous materials in the environment of the area. Hydrogen-3 in the Red GateWoods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Hydrogen-3 continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity.

  9. Surveillance of Site A and Plot M - Report for 2005.

    Energy Technology Data Exchange (ETDEWEB)

    Golchert, N. W.; ESH/QA Oversight

    2006-04-10

    The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for Calendar Year 2005 are presented. Based on the results of the 1976-1978 radiological characterization of the site, a determination was made that a surveillance program be established. The characterization study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby handpumped picnic wells. The current surveillance program began in 1980 and consists of sample collection and analysis of surface and subsurface water. The results of the analyses are used to (1) monitor the migration pathway of water from the burial ground (Plot M) to the handpumped picnic wells, (2) establish if buried radionuclides other than hydrogen-3 have migrated, and (3) monitor the presence of radioactive and chemically hazardous materials in the environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Hydrogen-3 continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity.

  10. D.3.2 PLOT Persuasive Learning Design Framework

    DEFF Research Database (Denmark)

    Gram-Hansen, Sandra Burri; Schärfe, Henrik; Winther-Nielsen, Nicolai

    2011-01-01

    of the technological learning tools and products which are currently related to the PLOT project, namely the GLOMaker and the 3ET tool, and a selection of GLOs and learning exercises. The primary focus of the analysis is to explore how the theoretical perspectives presented in D.3.1 are represented in these tools...... as an: ‚Internal report for project use containing an empirically-based assessment of existing systems and their potential in terms of learning and persuasion. This will be used as a discussion document by the consortium.‛ To meet the requirements of this deliverable, this documents presents analysis......, in particular the notions of persuasive design and constructive alignment. Whilst the report provides a persuasive design perspective on the technologies related to Euro PLOT, it must be stressed that if the document is to function as a basis for further discussion within the consortium, the partners...

  11. CADASTRAL CLASSIFICATION OF THE LAND PLOTS IN UKRAINE

    Directory of Open Access Journals (Sweden)

    KIRICHEK Yu. O.

    2016-04-01

    Full Text Available Summary. Work concerns development of national system of classification of the land plots. The developed classification will allow to solve correctly a number of the corresponding cadastral, land management, estimated and other tasks. The analysis of classifications of lands, improvements and real estate in general is made. The created offers concerning creation of a new classification of the land plots in Ukraine. Today the Ukrainian real estate market has no single system that separates the system property groups, classes and types. This significantly complicates the work and can not fully be aware of the specific situation of real estate market. This task is designed to solve classification properties, it is used to transition from a diversity of individual properties to a limited number of classes of evaluation objects. The classification is different functional purpose (use facilities assessment, which determines the difference in value.

  12. Materials selection as an interdisciplinary technical activity: basic methodology and case studies

    Directory of Open Access Journals (Sweden)

    M. Ferrante

    2000-04-01

    Full Text Available The technical activity known as Materials Selection is reviewed in its concepts and methodologies. Objectives and strategies are briefly presented and two important features are introduced and discussed; (i Merit Indices: a combination of materials properties, which maximises the objectives chosen by the designer and (ii Materials Properties Maps: a bi-dimensional space whose coordinates are pairs of properties in which materials can be plotted and compared directly in terms of their merit indices. A general strategy for the deduction of these indices is explained and a formal methodology to establish a ranking of candidate materials when multiple constraints intervene is presented. Finally, two case studies are discussed in depth, one related to materials substitution in the context of mechanical design and a less conventional case linking material selection to physical comfort in the home furniture industry.

  13. Persuasive Technology for Learning and Teaching – The EuroPLOT Project

    OpenAIRE

    Behringer, R; Soosay, M; Gram-Hansen, SB; Øhrstrøm, P; Sørensen, CG; Smith, C; Mikulecká, J; Winther-Nielsen, N; Winther-Nielsen, M; Herber, E

    2013-01-01

    The concept of persuasive design has demonstrated its benefits by changing human behavior in certain situations, but in the area of education and learning, this approach has rarely been used. To change this and to study the feasibility of persuasive technology in teaching and learning, the EuroPLOT project (PLOT = Persuasive Learning Objects and Technologies) has been funded 2010-2013 by the Education, Audiovisual and Culture Executive Agency (EACEA) in the Life-long Learning (LLL) programme....

  14. Problem solving using soft systems methodology.

    Science.gov (United States)

    Land, L

    This article outlines a method of problem solving which considers holistic solutions to complex problems. Soft systems methodology allows people involved in the problem situation to have control over the decision-making process.

  15. Comparative evolutionary diversity and phylogenetic structure across multiple forest dynamics plots: a mega-phylogeny approach

    Science.gov (United States)

    Erickson, David L.; Jones, Frank A.; Swenson, Nathan G.; Pei, Nancai; Bourg, Norman A.; Chen, Wenna; Davies, Stuart J.; Ge, Xue-jun; Hao, Zhanqing; Howe, Robert W.; Huang, Chun-Lin; Larson, Andrew J.; Lum, Shawn K. Y.; Lutz, James A.; Ma, Keping; Meegaskumbura, Madhava; Mi, Xiangcheng; Parker, John D.; Fang-Sun, I.; Wright, S. Joseph; Wolf, Amy T.; Ye, W.; Xing, Dingliang; Zimmerman, Jess K.; Kress, W. John

    2014-01-01

    Forest dynamics plots, which now span longitudes, latitudes, and habitat types across the globe, offer unparalleled insights into the ecological and evolutionary processes that determine how species are assembled into communities. Understanding phylogenetic relationships among species in a community has become an important component of assessing assembly processes. However, the application of evolutionary information to questions in community ecology has been limited in large part by the lack of accurate estimates of phylogenetic relationships among individual species found within communities, and is particularly limiting in comparisons between communities. Therefore, streamlining and maximizing the information content of these community phylogenies is a priority. To test the viability and advantage of a multi-community phylogeny, we constructed a multi-plot mega-phylogeny of 1347 species of trees across 15 forest dynamics plots in the ForestGEO network using DNA barcode sequence data (rbcL, matK, and psbA-trnH) and compared community phylogenies for each individual plot with respect to support for topology and branch lengths, which affect evolutionary inference of community processes. The levels of taxonomic differentiation across the phylogeny were examined by quantifying the frequency of resolved nodes throughout. In addition, three phylogenetic distance (PD) metrics that are commonly used to infer assembly processes were estimated for each plot [PD, Mean Phylogenetic Distance (MPD), and Mean Nearest Taxon Distance (MNTD)]. Lastly, we examine the partitioning of phylogenetic diversity among community plots through quantification of inter-community MPD and MNTD. Overall, evolutionary relationships were highly resolved across the DNA barcode-based mega-phylogeny, and phylogenetic resolution for each community plot was improved when estimated within the context of the mega-phylogeny. Likewise, when compared with phylogenies for individual plots, estimates of

  16. Radiological site assessment at sun rose claim utilizing ScanPlot{sup SM} technology

    Energy Technology Data Exchange (ETDEWEB)

    Downey, H., E-mail: heath.downey@amecfw.com [Amec Foster Wheeler, Portland, ME (United States)

    2015-07-01

    ScanPlot{sup SM} gamma spectroscopy land survey system was utilized for the overland survey of uranium at the Sun Rose Claim in the Northwest Territories. The Sun Rose Claim is a former uranium exploration site and previous investigations had identified uranium ore and waste rock. ScanPlot{sup SM} radiological scan surveys were performed utilizing a backpack system. ScanPlot{sup SM} platform utilized spectroscopy grade sodium iodide detectors configured for optimal spatial coverage and radiation detection. Survey locations were recorded using an on-board global positioning system (GPS). The radiological spectral data from the radiation detectors is automatically logged and linked with the GPS coordinates to an on-board computer to create isocontour figures using a color scale to represent radioactivity levels. The advantage of utilizing the ScanPlot{sup SM} system for this assessment is that the nature and extent of uranium is provided without having to collect and assay a large number of samples. (author)

  17. Estimation of Alcohol Concentration of Red Wine Based on Cole-Cole Plot

    Science.gov (United States)

    Watanabe, Kota; Taka, Yoshinori; Fujiwara, Osamu

    To evaluate the quality of wine, we previously measured the complex relative permittivity of wine in the frequency range from 10 MHz to 6 GHz with a network analyzer, and suggested a possibility that the maturity and alcohol concentration of wine can simultaneously be estimated from the Cole-Cole plot. Although the absolute accuracy has not been examined yet, this method will enable one to estimate the alcohol concentration of alcoholic beverages without any distillation equipment simply. In this study, to investigate the estimation accuracy of the alcohol concentration of wine by its Cole-Cole plots, we measured the complex relative permittivity of pure water and diluted ethanol solution from 100 MHz to 40 GHz, and obtained the dependence of the Cole-Cole plot parameters on alcohol concentration and temperature. By using these results as calibration data, we estimated the alcohol concentration of red wine from the Cole-Cole plots, which was compared with the measured one based on a distillation method. As a result, we have confirmed that the estimated alcohol concentration of red wine agrees with the measured results in an absolute error by less than 1 %.

  18. ABCASH plotting program users guide

    International Nuclear Information System (INIS)

    Troyer, G.L.

    1995-01-01

    The Automated Bar Coding of Air Samples at Hanford (ABCASH) system provides an integrated data collection, sample tracking, and data reporting system for radioactive particulate air filter samples. The ABCASH plotting program provides a graphical trend report for ABCASH of the performance of air sample results. This document provides an operational guide for using the program. Based on sample location identifier and date range, a trend chart of the available data is generated. The trend chart shows radiological activity versus time. General indications of directional trend of the concentrations in air over time may be discerned. Comparison limit set point values are also shown as derived from the ABCASH data base

  19. User Guide for the Plotting Software for the Los Alamos National Laboratory Nuclear Weapons Analysis Tools Version 2.0

    Energy Technology Data Exchange (ETDEWEB)

    Cleland, Timothy James [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2018-01-02

    The Los Alamos National Laboratory Plotting Software for the Nuclear Weapons Analysis Tools is a Java™ application based upon the open source library JFreeChart. The software provides a capability for plotting data on graphs with a rich variety of display options while allowing the viewer interaction via graph manipulation and scaling to best view the data. The graph types include XY plots, Date XY plots, Bar plots and Histogram plots.

  20. On the application and interpretation of Keeling plots in paleo climate research – deciphering δ13C of atmospheric CO2 measured in ice cores

    Directory of Open Access Journals (Sweden)

    P. Köhler

    2006-01-01

    Full Text Available The Keeling plot analysis is an interpretation method widely used in terrestrial carbon cycle research to quantify exchange processes of carbon between terrestrial reservoirs and the atmosphere. Here, we analyse measured data sets and artificial time series of the partial pressure of atmospheric carbon dioxide (pCO2 and of δ13C of CO2 over industrial and glacial/interglacial time scales and investigate to what extent the Keeling plot methodology can be applied to longer time scales. The artificial time series are simulation results of the global carbon cycle box model BICYCLE. The signals recorded in ice cores caused by abrupt terrestrial carbon uptake or release loose information due to air mixing in the firn before bubble enclosure and limited sampling frequency. Carbon uptake by the ocean cannot longer be neglected for less abrupt changes as occurring during glacial cycles. We introduce an equation for the calculation of long-term changes in the isotopic signature of atmospheric CO2 caused by an injection of terrestrial carbon to the atmosphere, in which the ocean is introduced as third reservoir. This is a paleo extension of the two reservoir mass balance equations of the Keeling plot approach. It gives an explanation for the bias between the isotopic signature of the terrestrial release and the signature deduced with the Keeling plot approach for long-term processes, in which the oceanic reservoir cannot be neglected. These deduced isotopic signatures are similar (−8.6‰ for steady state analyses of long-term changes in the terrestrial and marine biosphere which both perturb the atmospheric carbon reservoir. They are more positive than the δ13C signals of the sources, e.g. the terrestrial carbon pools themselves (−25‰. A distinction of specific processes acting on the global carbon cycle from the Keeling plot approach is not straightforward. In general, processes related to biogenic fixation or release of carbon have lower y

  1. Constructing General Orthogonal Fractional Factorial Split-Plot Designs

    NARCIS (Netherlands)

    Sartono, B.; Goos, P.; Schoen, E.

    2015-01-01

    While the orthogonal design of split-plot fractional factorial experiments has received much attention already, there are still major voids in the literature. First, designs with one or more factors acting at more than two levels have not yet been considered. Second, published work on nonregular

  2. Enhancement to the Tektronix PLOT-10 Terminal Control System for creation of graphics metafiles

    International Nuclear Information System (INIS)

    Gray, W.H.

    1983-01-01

    Many data handling and analysis codes at the Oak Ridge National Laboratory (ORNL) use the Tektronix PLOT-10 Terminal Control System to graphically display data upon Tektronix or Tektronix-emulating graphics devices. Prior to the development of the software libraries and postprocessors discussed within this report, ORNL users were limited to the type of hardcopy output obtainable from the Tektronix PLOT-10 software library. Only Tektronix graphics devices are supported by the PLOT-10 library. The graphics library presented here eliminates this restriction by implementing a suite of software that optionally creates a graphics metafile within the user's disk area while simultaneously drawing a display image on the screen of a user's Tektronix terminal. This graphics metafile can then be postprocessed onto any of the graphics devices at ORNL via the ORNL PLOT command

  3. Swallowing sound detection using hidden markov modeling of recurrence plot features

    International Nuclear Information System (INIS)

    Aboofazeli, Mohammad; Moussavi, Zahra

    2009-01-01

    Automated detection of swallowing sounds in swallowing and breath sound recordings is of importance for monitoring purposes in which the recording durations are long. This paper presents a novel method for swallowing sound detection using hidden Markov modeling of recurrence plot features. Tracheal sound recordings of 15 healthy and nine dysphagic subjects were studied. The multidimensional state space trajectory of each signal was reconstructed using the Taken method of delays. The sequences of three recurrence plot features of the reconstructed trajectories (which have shown discriminating capability between swallowing and breath sounds) were modeled by three hidden Markov models. The Viterbi algorithm was used for swallowing sound detection. The results were validated manually by inspection of the simultaneously recorded airflow signal and spectrogram of the sounds, and also by auditory means. The experimental results suggested that the performance of the proposed method using hidden Markov modeling of recurrence plot features was superior to the previous swallowing sound detection methods.

  4. Swallowing sound detection using hidden markov modeling of recurrence plot features

    Energy Technology Data Exchange (ETDEWEB)

    Aboofazeli, Mohammad [Faculty of Engineering, Department of Electrical and Computer Engineering, University of Manitoba, Winnipeg, Manitoba, R3T 5V6 (Canada)], E-mail: umaboofa@cc.umanitoba.ca; Moussavi, Zahra [Faculty of Engineering, Department of Electrical and Computer Engineering, University of Manitoba, Winnipeg, Manitoba, R3T 5V6 (Canada)], E-mail: mousavi@ee.umanitoba.ca

    2009-01-30

    Automated detection of swallowing sounds in swallowing and breath sound recordings is of importance for monitoring purposes in which the recording durations are long. This paper presents a novel method for swallowing sound detection using hidden Markov modeling of recurrence plot features. Tracheal sound recordings of 15 healthy and nine dysphagic subjects were studied. The multidimensional state space trajectory of each signal was reconstructed using the Taken method of delays. The sequences of three recurrence plot features of the reconstructed trajectories (which have shown discriminating capability between swallowing and breath sounds) were modeled by three hidden Markov models. The Viterbi algorithm was used for swallowing sound detection. The results were validated manually by inspection of the simultaneously recorded airflow signal and spectrogram of the sounds, and also by auditory means. The experimental results suggested that the performance of the proposed method using hidden Markov modeling of recurrence plot features was superior to the previous swallowing sound detection methods.

  5. Impact of Animal Waste Application on Runoff Water Quality in Field Experimental Plots

    Directory of Open Access Journals (Sweden)

    Paul B. Tchounwou

    2005-08-01

    Full Text Available Animal waste from dairy and poultry operations is an economical and commonly used fertilizer in the state of Louisiana. The application of animal waste to pasture lands not only is a source of fertilizer, but also allows for a convenient method of waste disposal. The disposal of animal wastes on land is a potential nonpoint source of water degradation. Water degradation and human health is a major concern when considering the disposal of large quantities of animal waste. The objective of this research was to determine the effect of animal waste application on biological (fecal coliform, Enterobacter spp. and Escherichia coli and physical/chemical (temperature, pH, nitrate nitrogen, ammonia nitrogen, phosphate, copper, zinc, and sulfate characteristics of runoff water in experimental plots. The effects of the application of animal waste have been evaluated by utilizing experimental plots and simulated rainfall events. Samples of runoff water were collected and analyzed for fecal coliforms. Fecal coliforms isolated from these samples were identified to the species level. Chemical analysis was performed following standard test protocols. An analysis of temperature, ammonia nitrogen, nitrate nitrogen, iron, copper, phosphate, potassium, sulfate, zinc and bacterial levels was performed following standard test protocols as presented in Standard Methods for the Examination of Water and Wastewater [1]. In the experimental plots, less time was required in the tilled broiler litter plots for the measured chemicals to decrease below the initial pre-treatment levels. A decrease of over 50% was noted between the first and second rainfall events for sulfate levels. This decrease was seen after only four simulated rainfall events in tilled broiler litter plots whereas broiler litter plots required eight simulated rainfall events to show this same type of reduction. A reverse trend was seen in the broiler litter plots and the tilled broiler plots for potassium

  6. IMPLEMENTATION OF DEMONSTRATION PLOTS DME NYAMPLUNG (Calophyllum inophyllum L IN BULUAGUNG AND PATUTREJO VILLAGES

    Directory of Open Access Journals (Sweden)

    Bambang Uripno

    2014-05-01

    Full Text Available   The purpose of this study were to evaluate the condition of the frist demplot DME nyamplung. Energy self sufficient village program aims to improve stock and diverse energy source and society economic opportunity. Nyamplung is very potential plant to be used as raw material of biofuel, because it has very high fat plant content and has not be used for food. The biofuel from nyamplung is a new innovation. Involvement of forest village community in biofuel industry development both as producers and as consumers is very important. Forestry Ministry has established demonstration plots in Buluagung and Patutrejo villages as a facilitation in developing biofuel nyamplung silvoindustry. Up to now, the demplots still faces some problems. The researh method was qualitatif analysis. Collecting data from 62 respondents using purposive sampling. Data were collected using questionnaires, field obsevation, and in-depth interview. Focus group discussion  was used to confirm the data from the respondents. Research results show that the demplots have not been developed through participatory approach. Involvement of community to demplots activity is low. Involvement of the village communities are significantly correlated to biofuel price, technology innovation, role of demplot and support from local leaders.  

  7. A systematic methodology for design of tailor-made blended products

    DEFF Research Database (Denmark)

    Yunus, Nor Alafiza Binti; Gernaey, Krist; Woodley, John

    2014-01-01

    A systematic methodology for design of tailor-made blended products has been developed. In tailor-made blended products, one identifies the product needs and matches them by blending different chemicals. The systematic methodology has four main tasks. First, the design problem is defined: the pro......, the methodology is highlighted through two case studies involving gasoline blends and lubricant base oils....

  8. On the role of final-state interactions in Dalitz plot studies

    International Nuclear Information System (INIS)

    Kubis, Bastian; Niecknig, Franz; Schneider, Sebastian P.

    2012-01-01

    The study of Dalitz plots of heavy-meson decays to multi-hadron final states has received intensified interest by the possibility to gain access to precision investigations of CP violation. A thorough understanding of the hadronic final-state interactions is a prerequisite to achieve a highly sensitive, model-independent study of such Dalitz plots. We illustrate some of the theoretical tools, predominantly taken from dispersion theory, available for these and related purposes, and discuss the low-energy decays ω,φ→3π in some more detail.

  9. On the role of final-state interactions in Dalitz plot studies

    Energy Technology Data Exchange (ETDEWEB)

    Kubis, Bastian, E-mail: kubis@hiskp.uni-bonn.de [Helmholtz-Institut fuer Strahlen- und Kernphysik and Bethe Center for Theoretical Physics, Universitaet Bonn (Germany); Niecknig, Franz; Schneider, Sebastian P. [Helmholtz-Institut fuer Strahlen- und Kernphysik and Bethe Center for Theoretical Physics, Universitaet Bonn (Germany)

    2012-04-15

    The study of Dalitz plots of heavy-meson decays to multi-hadron final states has received intensified interest by the possibility to gain access to precision investigations of CP violation. A thorough understanding of the hadronic final-state interactions is a prerequisite to achieve a highly sensitive, model-independent study of such Dalitz plots. We illustrate some of the theoretical tools, predominantly taken from dispersion theory, available for these and related purposes, and discuss the low-energy decays {omega},{phi}{yields}3{pi} in some more detail.

  10. On the role of final-state interactions in Dalitz plot studies

    Science.gov (United States)

    Kubis, Bastian; Niecknig, Franz; Schneider, Sebastian P.

    2012-04-01

    The study of Dalitz plots of heavy-meson decays to multi-hadron final states has received intensified interest by the possibility to gain access to precision investigations of CP violation. A thorough understanding of the hadronic final-state interactions is a prerequisite to achieve a highly sensitive, model-independent study of such Dalitz plots. We illustrate some of the theoretical tools, predominantly taken from dispersion theory, available for these and related purposes, and discuss the low-energy decays ω,ϕ→3π in some more detail.

  11. Graphical interpretation of confidence curves in rankit plots

    DEFF Research Database (Denmark)

    Hyltoft Petersen, Per; Blaabjerg, Ole; Andersen, Marianne

    2004-01-01

    A well-known transformation from the bell-shaped Gaussian (normal) curve to a straight line in the rankit plot is investigated, and a tool for evaluation of the distribution of reference groups is presented. It is based on the confidence intervals for percentiles of the calculated Gaussian distri...

  12. Geopolitical location and plot in The Night Manager

    DEFF Research Database (Denmark)

    Agger, Gunhild

    2017-01-01

    The Night Manager. Three perspectives are tested in combining the analysis of location with the development of the plot: the general concepts of universal and real geography; the idea of being located inside or outside a given context; and the associated notion of centre-periphery opposition. A geopolitical...

  13. SinaPlot: an enhanced chart for simple and truthful representation of single observations over multiple classes

    DEFF Research Database (Denmark)

    Sidiropoulos, Nikos; Sohi, Sina Hadi; Pedersen, Thomas Lin

    2017-01-01

    the representation of data sets with differing sample size we have developed a new type of plot overcoming limitations of current standard visualization charts. SinaPlot is inspired by the strip chart and the violin plot and operates by letting the normalized density of points restrict the jitter along the x...

  14. FITTING AND TESTING ALLOMETRIC EQUATIONS FOR MEXICO’S SINALOAN TROPICAL DRY TREES AND FOREST INVENTORY PLOTS

    Directory of Open Access Journals (Sweden)

    Jose de Jesus Navar Chaidez

    2016-05-01

    Full Text Available Aboveground tree biomass (bole, branches and foliage, M, plays a key role in the conventional and sustainable management of forest communities. The standard approach to assess tree or plot M is harvesting trees, developing and fitting allometric equations to trees or forest inventory plot data. In the absence of local tree allometry, it is usually recommended to fit off site allometric equations to evaluate tree or plot M. This research aims: (a to develop an updated on site allometric equation (b to fit available off site allometric equations to destructively harvested trees and (c to fit available allometric equations to plot M of Mexico’s Sinaloan tropical dry forests to understand sources of inherent tree and plot M variability. Results showed that: (a the improved on site allometric equation increases precision in contrast to the conventional biomass equation previously reported as well as to off site tree M equations, (b off site allometry projects tree and plot M deviates by close to one order of magnitude. Two tested and recommended approaches to increase tree and plot M precision when fitting off site equations are: (i to use all available tree allometric functions to come up with a mean equation or (ii to calibrate off site equations by fitting new, local parameters that can be calculated using statistical programs.These options would eventually increase tree and plot M precision in regional evaluations.

  15. Uniqueness plots: A simple graphical tool for identifying poor peak fits in X-ray photoelectron spectroscopy

    Science.gov (United States)

    Singh, Bhupinder; Diwan, Anubhav; Jain, Varun; Herrera-Gomez, Alberto; Terry, Jeff; Linford, Matthew R.

    2016-11-01

    Peak fitting is an essential part of X-ray photoelectron spectroscopy (XPS) narrow scan analysis, and the Literature contains both good and bad examples of peak fitting. A common cause of poor peak fitting is the inclusion of too many fit parameters, often without a sound chemical and/or physical basis for them, and/or the failure to reasonably constrain them. Under these conditions, fit parameters are often correlated, and therefore lacking in statistical meaning. Here we introduce the uniqueness plot as a simple graphical tool for identifying bad peak fits in XPS, i.e., fit parameter correlation. These plots are widely used in spectroscopic ellipsometry. We illustrate uniqueness plots with two data sets: a C 1s narrow scan from ozone-treated carbon nanotube forests and an Si 2p narrow scan from an air-oxidized silicon wafer. For each fit, we consider different numbers of parameters and constraints on them. As expected, the uniqueness plots are parabolic when fewer fit parameters and/or more constraints are applied. However, they fan out and eventually become horizontal lines as more unconstrained parameters are included in the fits. Uniqueness plots are generated by plotting the chi squared (χ2) value for a fit vs. a systematically varied value of a parameter in the fit. The Abbe criterion is also considered as a figure of merit for uniqueness plots in the Supporting Information. We recommend that uniqueness plots be used by XPS practitioners for identifying inappropriate peak fits.

  16. An LWR design decision Methodology

    International Nuclear Information System (INIS)

    Leahy, T.J.; Rees, D.C.; Young, J.

    1982-01-01

    While all parties involved in nuclear plant regulation endeavor to make decisions which optimize the considerations of plant safety and financial impacts, these decisions are generally made without the benefit of a systematic and rigorous approach to the questions confronting the decision makers. A Design Decision Methodology has been developed which provides such a systematic approach. By employing this methodology, which makes use of currently accepted probabilistic risk assessment techniques and cost estimation, informed decisions may be made against a background of comparisons between the relative levels of safety and costs associated with various design alternatives

  17. The Application of TD/GC/NICI-MS with an Al2O3-PLOT-S Column for the Determination of Perfluoroalkylcycloalkanes in the Atmosphere.

    Science.gov (United States)

    Ren, Yu; Schlager, Hans; Martin, Damien

    2014-01-01

    A modified method for the quantitative determination of atmospheric perfluoroalkylcycloalkanes (PFCs) using thermal desorption coupled with gas chromatography and detection by negative ion chemical ionization-mass spectrometry was developed. Using an optimized analytical system, a commercially available Al 2 O 3 porous layer open tubular (PLOT) capillary column (30 m × 0.25 mm) deactivated with Na 2 SO 4 was used for separation of PFCs. Improvements in the separation of PFCs, the corresponding identification and the limit of detection of PFCs using this method and column are presented. The method was successfully applied to determine the atmospheric background concentrations of a range of PFCs from a number of samples collected at a rural site in Germany. The results of this study suggest that the method outlined using the Al 2 O 3 -PLOT-S capillary column has good sensitivity and selectivity, and that it can be deployed in a routine laboratory process for the analysis of PFCs in the future research work. In addition, the ability of this column to separate the isomers of one of the lower boiling PFCs (perfluorodimethylcyclobutane) and its ability to resolve perfluoroethylcyclohexane offer the opportunity for single-column analysis for multiple PFCs.

  18. Fungicides transport in runoff from vineyard plot and catchment: contribution of non-target areas.

    Science.gov (United States)

    Lefrancq, Marie; Payraudeau, Sylvain; García Verdú, Antonio Joaquín; Maillard, Elodie; Millet, Maurice; Imfeld, Gwenaël

    2014-04-01

    Surface runoff and erosion during the course of rainfall events are major processes of pesticides transport from agricultural land to aquatic ecosystem. These processes are generally evaluated either at the plot or the catchment scale. Here, we compared at both scales the transport and partitioning in runoff water of two widely used fungicides, i.e., kresoxim-methyl (KM) and cyazofamid (CY). The objective was to evaluate the relationship between fungicides runoff from the plot and from the vineyard catchment. The results show that seasonal exports for KM and CY at the catchment were larger than those obtained at the plot. This underlines that non-target areas within the catchment largely contribute to the overall load of runoff-associated fungicides. Estimations show that 85 and 62 % of the loads observed for KM and CY at the catchment outlet cannot be explained by the vineyard plots. However, the partitioning of KM and CY between three fractions, i.e., the suspended solids (>0.7 μm) and two dissolved fractions (i.e., between 0.22 and 0.7 µm and plot scales enable to evaluate the sources areas of pesticide off-site transport.

  19. Methodological pluralism in the teaching of Astronomy

    Science.gov (United States)

    de Macedo, Josué Antunes; Voelzke, Marcos Rincon

    2015-04-01

    This paper discusses the feasibility of using a teaching strategy called methodological pluralism, consisting of the use of various methodological resources in order to provide a meaningful learning. It is part of a doctoral thesis, which aims to investigate contributions to the use of traditional resources combined with digital technologies, in order to create autonomy for future teachers of Natural Sciences and Mathematics in relation to themes in Astronomy. It was offered an extension course at the "Federal Institution of Education, Science and Technology" in the North of Minas Gerais (FINMG), Campus Januaria, for thirty-two students of licentiate courses in Physics, Mathematics and Biological Sciences, involving themes of Astronomy, in order to search and contribute to improving the training of future teachers. The following aspects are used: the mixed methodology, with pre-experimental design, combined with content analysis. The results indicate the rates of students' prior knowledge in relation to Astronomy was low; meaningful learning indications of concepts related to Astronomy, and the feasibility of using digital resources Involving technologies, articulated with traditional materials in the teaching of Astronomy. This research sought to contribute to the initial teacher training, especially in relation to Astronomy Teaching, proposing new alternatives to promote the teaching of this area of knowledge, extending the methodological options of future teachers.

  20. A dynamic systems engineering methodology research study. Phase 2: Evaluating methodologies, tools, and techniques for applicability to NASA's systems projects

    Science.gov (United States)

    Paul, Arthur S.; Gill, Tepper L.; Maclin, Arlene P.

    1989-01-01

    A study of NASA's Systems Management Policy (SMP) concluded that the primary methodology being used by the Mission Operations and Data Systems Directorate and its subordinate, the Networks Division, is very effective. Still some unmet needs were identified. This study involved evaluating methodologies, tools, and techniques with the potential for resolving the previously identified deficiencies. Six preselected methodologies being used by other organizations with similar development problems were studied. The study revealed a wide range of significant differences in structure. Each system had some strengths but none will satisfy all of the needs of the Networks Division. Areas for improvement of the methodology being used by the Networks Division are listed with recommendations for specific action.

  1. A tool to determine crown and plot canopy transparency for forest inventory and analysis phase 3 plots using digital photographs

    Science.gov (United States)

    Matthew F. Winn; Philip A. Araman

    2012-01-01

    The USDA Forest Service Forest Inventory and Analysis (FIA) program collects crown foliage transparency estimates for individual trees on Phase 3 (P3) inventory plots. The FIA crown foliage estimate is obtained from a pair of perpendicular side views of the tree. Researchers with the USDA Forest Service Southern Research Station have developed a computer program that...

  2. Silvicultural operation on the forest ecosystems: Methodology for forest hydrological monitoring; Effetti del taglio sugli ecosistemi forestali in ambiente montamo: Proposte metologiche per il monitoraggio dell`idrologia forestale

    Energy Technology Data Exchange (ETDEWEB)

    Andreotti, A; Collina, M; Serra, F; Naviglio, L [ENEA, Centro Ricerche Brasimone, Bologna (Italy). Dipt. Ambiente; Bonora, P [ENEA, Centro Ricerche ` E. Clementel` , Bologna (Italy). Dipt. Ambiente; Gregori, E; Napoli, R [Istituto Sperimentale per lo Studio e la Difesa del Suolo, Firenze (Italy)

    1997-03-01

    During 1994, Ente Nazionale per l`Energia Elettrica, with the contribution of the Ministry of Agricultural, Alimentary and Forest Resources, started a research program to assess the effects of the silvicultural operations on the forest ecosystems, investigating particularly the hydrological aspects, the erosion and the nutrient cycle. The research must monitor two forest plots coinciding with two secondary watersheds in the Torto stream valley (Northern Italy - high Bolognan Appennines) during about ten years. One plot will be let naturally evolve, while the other one, after a period of 3-5 years, must be subject to a cut; the comparison between the two plots will allow us to evaluate the nature and the size of the changes induced in the ecosystem by man through the silvicultural operations. Because of the complexity of the environmental parameters the authors want to study, initially it was necessary to determine methodology and instruments required for attaining the set goals. In this technical report are shown the results the authors obtained at the end of this first testing and setting up period, and therefore it assumes the form of a methodological protocol for carrying out the research itself.

  3. XNWLUP, Graphical user interface to plot WIMS-D library multigroup cross sections

    International Nuclear Information System (INIS)

    Ganesan, S.; Jagannathan, V.; Thiyagarajan, T.K.

    2005-01-01

    1 - Description of program or function: XnWlup is a computer program with user-friendly graphical interface to help the users of WIMS-D library to enable quick visualisation of the plots of the energy dependence of the multigroup cross sections of any nuclide of interest. This software enables the user to generate and view the histogram of 69 multi-group cross sections as a function of neutron energy under Microsoft Windows environment. This software is designed using Microsoft Visual C++ and Microsoft Foundation Classes Library. IAEA1395/05: New features of version 3.0: - Plotting absorption and fission cross sections of resonant nuclide after applying the self-shielding cross section. - Plotting the data of Resonant Integral table, as a function of dilution cross section for a selected temperature and for a given energy group. - Plotting the data of Resonant Integral table, as a function of temperature for a selected background dilution cross section and for a given energy group. - Clearing all the graphs except one graph from the display screen is easily done by using a tool bar button. - Displaying the coordinate of the cursor point with appropriate units. 2 - Methods: XnWlup helps to obtain histogram plots of the values of cross section data of an element/isotope available as 69-group WIMS-D library as a function of energy bins. The software XnWlup is developed with this graphical user interface in order to help those users who frequently refer to the WIMS-D library cross section data of neutron-nuclear reactions. The software also helps to produce handbook of WIMS-D cross sections

  4. A simple nanoindentation-based methodology to assess the strength of brittle thin films

    International Nuclear Information System (INIS)

    Borrero-Lopez, Oscar; Hoffman, Mark; Bendavid, Avi; Martin, Phil J.

    2008-01-01

    In this work, we report a simple methodology to assess the mechanical strength of sub-micron brittle films. Nanoindentation of as-deposited tetrahedral amorphous carbon (ta-C) and Ti-Si-N nanocomposite films on silicon substrates followed by cross-sectional examination of the damage with a focused ion beam (FIB) miller allows the occurrence of cracking to be assessed in comparison with discontinuities (pop-ins) in the load-displacement curves. Strength is determined from the critical loads at which first cracking occurs using the theory of plates on a soft foundation. This methodology enables Weibull plots to be readily obtained, avoiding complex freestanding-film machining processes. This is of great relevance, since the mechanical strength of thin films ultimately controls their reliable use in a broad range of functional uses such as tribological coatings, magnetic drives, MEMS and biomedical applications

  5. karyoploteR: an R/Bioconductor package to plot customizable genomes displaying arbitrary data.

    Science.gov (United States)

    Gel, Bernat; Serra, Eduard

    2017-10-01

    Data visualization is a crucial tool for data exploration, analysis and interpretation. For the visualization of genomic data there lacks a tool to create customizable non-circular plots of whole genomes from any species. We have developed karyoploteR, an R/Bioconductor package to create linear chromosomal representations of any genome with genomic annotations and experimental data plotted along them. Plot creation process is inspired in R base graphics, with a main function creating karyoplots with no data and multiple additional functions, including custom functions written by the end-user, adding data and other graphical elements. This approach allows the creation of highly customizable plots from arbitrary data with complete freedom on data positioning and representation. karyoploteR is released under Artistic-2.0 License. Source code and documentation are freely available through Bioconductor (http://www.bioconductor.org/packages/karyoploteR) and at the examples and tutorial page at https://bernatgel.github.io/karyoploter_tutorial. bgel@igtp.cat. © The Author(s) 2017. Published by Oxford University Press.

  6. SCALPLO - a universal program for plotting flux output from SCALE modules and related programs. User's manual

    International Nuclear Information System (INIS)

    Hersman, A.; Leege, P.F.A. de; Hoogenboom, J.E.

    1992-04-01

    The FORTRAN-77 program SCALPLO is being developed to make an easy and quick graphic survey of flux and/or power data calculated with SCALE modules or other core calculation or shielding codes. The basic plot functions it can perform are one- and two-dimensional plots of flux or power distributions and flux energy spectra. More specifically it can produce plots of the flux distribution in a one-dimensional geometry for one or more energy groups in one figure. It can also plot the flux distribution along a cut through a two- or three-dimensional geometry along one of the coordinate axes and it can plot a two-dimensional view of the flux distribution of a two-dimensional geometry or of a plane cut through a three-dimensional geometry. The same can be done for the power distribution in a system. Furthermore SCALPLO can plot the particle flux spectrum as a function of energy, either as group fluxes or as group fluxes per unit energy or per unit lethargy. (orig./HP)

  7. Effect of methodological and ecological approaches on heterogeneity of nest-site selection of a long-lived vulture.

    Directory of Open Access Journals (Sweden)

    Rubén Moreno-Opo

    Full Text Available The application of scientific-based conservation measures requires that sampling methodologies in studies modelling similar ecological aspects produce comparable results making easier their interpretation. We aimed to show how the choice of different methodological and ecological approaches can affect conclusions in nest-site selection studies along different Palearctic meta-populations of an indicator species. First, a multivariate analysis of the variables affecting nest-site selection in a breeding colony of cinereous vulture (Aegypius monachus in central Spain was performed. Then, a meta-analysis was applied to establish how methodological and habitat-type factors determine differences and similarities in the results obtained by previous studies that have modelled the forest breeding habitat of the species. Our results revealed patterns in nesting-habitat modelling by the cinereous vulture throughout its whole range: steep and south-facing slopes, great cover of large trees and distance to human activities were generally selected. The ratio and situation of the studied plots (nests/random, the use of plots vs. polygons as sampling units and the number of years of data set determined the variability explained by the model. Moreover, a greater size of the breeding colony implied that ecological and geomorphological variables at landscape level were more influential. Additionally, human activities affected in greater proportion to colonies situated in Mediterranean forests. For the first time, a meta-analysis regarding the factors determining nest-site selection heterogeneity for a single species at broad scale was achieved. It is essential to homogenize and coordinate experimental design in modelling the selection of species' ecological requirements in order to avoid that differences in results among studies would be due to methodological heterogeneity. This would optimize best conservation and management practices for habitats and species in

  8. Measurement of the ω → π+π-π0 Dalitz plot distribution

    Science.gov (United States)

    Adlarson, P.; Augustyniak, W.; Bardan, W.; Bashkanov, M.; Bergmann, F. S.; Berłowski, M.; Bhatt, H.; Bondar, A.; Büscher, M.; Calén, H.; Ciepał, I.; Clement, H.; Czerwiński, E.; Demmich, K.; Engels, R.; Erven, A.; Erven, W.; Eyrich, W.; Fedorets, P.; Föhl, K.; Fransson, K.; Goldenbaum, F.; Goswami, A.; Grigoryev, K.; Gullström, C.-O.; Heijkenskjöld, L.; Hejny, V.; Hüsken, N.; Jarczyk, L.; Johansson, T.; Kamys, B.; Kemmerling, G.; Khan, F. A.; Khatri, G.; Khoukaz, A.; Khreptak, O.; Kirillov, D. A.; Kistryn, S.; Kleines, H.; Kłos, B.; Krzemień, W.; Kulessa, P.; Kupść, A.; Kuzmin, A.; Lalwani, K.; Lersch, D.; Lorentz, B.; Magiera, A.; Maier, R.; Marciniewski, P.; Mariański, B.; Morsch, H.-P.; Moskal, P.; Ohm, H.; Perez del Rio, E.; Piskunov, N. M.; Prasuhn, D.; Pszczel, D.; Pysz, K.; Pyszniak, A.; Ritman, J.; Roy, A.; Rudy, Z.; Rundel, O.; Sawant, S.; Schadmand, S.; Schätti-Ozerianska, I.; Sefzick, T.; Serdyuk, V.; Shwartz, B.; Sitterberg, K.; Skorodko, T.; Skurzok, M.; Smyrski, J.; Sopov, V.; Stassen, R.; Stepaniak, J.; Stephan, E.; Sterzenbach, G.; Stockhorst, H.; Ströher, H.; Szczurek, A.; Trzciński, A.; Varma, R.; Wolke, M.; Wrońska, A.; Wüstner, P.; Yamamoto, A.; Zabierowski, J.; Zieliński, M. J.; Złomańczuk, J.; Żuprański, P.; Żurek, M.; Kubis, B.; Leupold, S.

    2017-07-01

    Using the production reactions pd →3He ω and pp → ppω, the Dalitz plot distribution for the ω →π+π-π0 decay is studied with the WASA detector at COSY, based on a combined data sample of (4.408 ± 0.042) ×104 events. The Dalitz plot density is parametrised by a product of the P-wave phase space and a polynomial expansion in the normalised polar Dalitz plot variables Z and ϕ. For the first time, a deviation from pure P-wave phase space is observed with a significance of 4.1σ. The deviation is parametrised by a linear term 1 + 2 αZ, with α determined to be + 0.147 ± 0.036, consistent with the expectations of ρ-meson-type final-state interactions of the P-wave pion pairs.

  9. Amplitude analysis of the D+ -> K-S(0)pi + (0)(pi) Dalitz plot

    NARCIS (Netherlands)

    Ablikim, M.; Achasov, M. N.; Ai, X. C.; Albayrak, O.; Albrecht, M.; Ambrose, D. J.; An, F. F.; An, Q.; Bai, J. Z.; Ferroli, R. Baldini; Ban, Y.; Bennett, J. V.; Bertani, M.; Bian, J. M.; Boger, E.; Bondarenko, O.; Boyko, I.; Braun, S.; Briere, R. A.; Cai, H.; Cai, X.; Cakir, O.; Calcaterra, A.; Cao, G. F.; Cetin, S. A.; Chang, J. F.; Chelkov, G.; Chen, G.; Chen, H. S.; Chen, J. C.; Chen, M. L.; Chen, S. J.; Chen, X.; Chen, X. R.; Chen, Y. B.; Cheng, H. P.; Chu, X. K.; Chu, Y. P.; Cronin-Hennessy, D.; Dai, H. L.; Dai, J. P.; Dedovich, D.; Deng, Z. Y.; Denig, A.; Denysenko, I.; Kalantar-Nayestanaki, N.; Kavatsyuk, M.; Loehner, H.; Messchendorp, J. G.; Moeini, H.

    2014-01-01

    We perform an analysis of the D+ -> K-S(0)pi + (0)(pi) Dalitz plot using a data set of 2.92 fb(-1) of e(+) e(-) collisions at the (3770) mass accumulated by the BESIII experiment, in which 166694 candidate events are selected with a background of 15.1%. The Dalitz plot is found to be well

  10. Methodological challenges involved in compiling the Nahua pharmacopeia.

    Science.gov (United States)

    De Vos, Paula

    2017-06-01

    Recent work in the history of science has questioned the Eurocentric nature of the field and sought to include a more global approach that would serve to displace center-periphery models in favor of approaches that take seriously local knowledge production. Historians of Iberian colonial science have taken up this approach, which involves reliance on indigenous knowledge traditions of the Americas. These traditions present a number of challenges to modern researchers, including availability and reliability of source material, issues of translation and identification, and lack of systematization. This essay explores the challenges that emerged in the author's attempt to compile a pre-contact Nahua pharmacopeia, the reasons for these challenges, and the ways they may - or may not - be overcome.

  11. The Brazilian national system of forest permanent plots

    Science.gov (United States)

    Yeda Maria Malheiros de Oliveira; Maria Augusta Doetzer Rosot; Patricia Povoa de Mottos; Joberto Veloso de Freitas; Guilherme Luis Augusto Gomide; < i> et al< /i>

    2009-01-01

    The Brazilian National System of Forest Permanent Plots (SisPP) is a governmental initiative designed and being implemented in partnership by the Ministry of Environment (MMA), represented by the National Forest Programme (PNF) and the Brazilian Forest Service (SFB) and the Embrapa Forestry (a research center of the Brazilian Agricultural Research Corporation - Embrapa...

  12. Generalized plotting facility

    Energy Technology Data Exchange (ETDEWEB)

    Burris, R.D.; Gray, W.H.

    1978-01-01

    A command which causes the translation of any supported graphics file format to a format acceptable to any supported device was implemented on two linked DECsystem-10s. The processing of the command is divided into parsing and translating phases. In the parsing phase, information is extracted from the command and augmented by default data. The results of this phase are saved on disk, and the appropriate translating routine is invoked. Twenty-eight translating programs were implemented in this system. They support four different graphics file formats, including the DISSPLA and Calcomp formats, and seven different types of plotters, including Tektronix, Calcomp, and Versatec devices. Some of the plotters are devices linked to the DECsystem-10s, and some are driven by IBM System/360 computers linked via a communications network to the DECsystem-10s. The user of this facility can use any of the supported packages to create a file of graphics data, preview the file on an on-line scope, and, when satisfied, cause the same data to be plotted on a hard-copy device. All of the actions utilize a single simple command format. 2 figures.

  13. Estimating vegetation biomass and cover across large plots in shrub and grass dominated drylands using terrestrial lidar and machine learning

    Science.gov (United States)

    Anderson, Kyle E.; Glenn, Nancy F.; Spaete, Lucas P.; Shinneman, Douglas; Pilliod, David S.; Arkle, Robert; McIlroy, Susan; Derryberry, DeWayne R.

    2018-01-01

    Terrestrial laser scanning (TLS) has been shown to enable an efficient, precise, and non-destructive inventory of vegetation structure at ranges up to hundreds of meters. We developed a method that leverages TLS collections with machine learning techniques to model and map canopy cover and biomass of several classes of short-stature vegetation across large plots. We collected high-definition TLS scans of 26 1-ha plots in desert grasslands and big sagebrush shrublands in southwest Idaho, USA. We used the Random Forests machine learning algorithm to develop decision tree models predicting the biomass and canopy cover of several vegetation classes from statistical descriptors of the aboveground heights of TLS points. Manual measurements of vegetation characteristics collected within each plot served as training and validation data. Models based on five or fewer TLS descriptors of vegetation heights were developed to predict the canopy cover fraction of shrubs (R2 = 0.77, RMSE = 7%), annual grasses (R2 = 0.70, RMSE = 21%), perennial grasses (R2 = 0.36, RMSE = 12%), forbs (R2 = 0.52, RMSE = 6%), bare earth or litter (R2 = 0.49, RMSE = 19%), and the biomass of shrubs (R2 = 0.71, RMSE = 175 g) and herbaceous vegetation (R2 = 0.61, RMSE = 99 g) (all values reported are out-of-bag). Our models explained much of the variability between predictions and manual measurements, and yet we expect that future applications could produce even better results by reducing some of the methodological sources of error that we encountered. Our work demonstrates how TLS can be used efficiently to extend manual measurement of vegetation characteristics from small to large plots in grasslands and shrublands, with potential application to other similarly structured ecosystems. Our method shows that vegetation structural characteristics can be modeled without classifying and delineating individual plants, a challenging and time-consuming step common in previous

  14. The isometric log-ratio (ilr)-ion plot: A proposed alternative to the Piper diagram

    Science.gov (United States)

    Shelton, Jenna L.; Engle, Mark A.; Buccianti, Antonella; Blondes, Madalyn S.

    2018-01-01

    The Piper diagram has been a staple for the analysis of water chemistry data since its introduction in 1944. It was conceived to be a method for water classification, determination of potential water mixing between end-members, and to aid in the identification of chemical reactions controlling a sample set. This study uses the information gleaned over the years since the release of the Piper diagram and proposes an alternative to it, capturing the strengths of the original diagram while adding new ideas to increase its robustness. The new method uses compositional data analysis to create 4 isometric log-ratio coordinates for the 6 major chemical species analyzed in the Piper diagram and transforms the data to a 4-field bi-plot, the ilr-ion plot. This ilr-ion plot conveys all of the information in the Piper diagram (water mixing, water types, and chemical reactions) while also visualizing additional data, the ability to examine Ca2+/Mg2+ versus Cl-/SO42−. The Piper and the ilr-ion plot were also compared using multiple synthetic and real datasets in order to illustrate the caveats and the advantages of using either diagram to analyze water chemistry data. Although there are challenges with using the ilr-ion plot (e.g., missing or zero values zeros in the dataset must be imputed by positive real numbers), it appears that the use of compositional data analysis coupled with the ilr-ion plot provides a more in-depth and complete analysis of water quality data compared to the original Piper diagram.

  15. LAND SURVEY AND CADASTRAL MEASUREMENT MADE FOR AN PLOT PLAN COMPLEX

    Directory of Open Access Journals (Sweden)

    Madalina Marian

    2012-12-01

    Full Text Available According to Law no. 7/1996 of Cadastre and Real Estate Publicity, plan plot is a strip ground graphical representation containing strip ground limits and details of all the buildings that define stable land and cadastral division strip ground is technical administrative unit defined by fixed details, identifiable field that does not change over time, such as roads, water, dams, etc. This paper presents how to make a plot plan strip ground covering a 4 forest Ups (production unit and 108UAs (limits of forestry, land use is forest, pasture and village road. High surface is located extraurban limits Arefu in Arges County and has 28185443mp, that’ s equivalent to 2818,54ha. Forest cadastre specific limits are drawn in the work arrangement of forests and are represented by plot limit and the subparcels limit. This paper aims to presenting the main components of a modern surveying device used in our country, to carry out surveying works for forest cadastre. To use GPS technology (Global Position System in combination with the total station.

  16. On the curvature of transmitted intensity plots in broad beam studies

    International Nuclear Information System (INIS)

    El-Kateb, A.H.

    2000-01-01

    Transmission of a broad beam of gamma rays of 81- and 356-keV energies from 133 Ba is studied singly and dually. This study is the first to deal with the curvatures of the intensity plots. The targets are dextrose solutions of percentage concentrations up to 0.125 and soil containing water with concentrations up to 0.319. The logarithmic intensity plots are expressed in terms of a polynomial in the concentration. The curvatures of the plots are measured and calculated on the basis of the theoretical mass attenuation coefficients. The results are discussed in conjunction with buildup factors and the probability of photoelectric and Compton interactions. The curvatures show maxima when incoherent interaction prevails. This is evidently proved in case of the single 356-keV and of the dual 81- and 356-keV applied energies. Comparison is performed between the measured and calculated curvatures. The concept of curvature is applied and discussed for published results of narrow beam geometry. Correspondingly, this is the first search to introduce curvature instead of buildup as a measure for transmitted collided photons

  17. Calibration of multivariate scatter plots for exploratory analysis of relations within and between sets of variables in genomic research.

    Science.gov (United States)

    Graffelman, Jan; van Eeuwijk, Fred

    2005-12-01

    The scatter plot is a well known and easily applicable graphical tool to explore relationships between two quantitative variables. For the exploration of relations between multiple variables, generalisations of the scatter plot are useful. We present an overview of multivariate scatter plots focussing on the following situations. Firstly, we look at a scatter plot for portraying relations between quantitative variables within one data matrix. Secondly, we discuss a similar plot for the case of qualitative variables. Thirdly, we describe scatter plots for the relationships between two sets of variables where we focus on correlations. Finally, we treat plots of the relationships between multiple response and predictor variables, focussing on the matrix of regression coefficients. We will present both known and new results, where an important original contribution concerns a procedure for the inclusion of scales for the variables in multivariate scatter plots. We provide software for drawing such scales. We illustrate the construction and interpretation of the plots by means of examples on data collected in a genomic research program on taste in tomato.

  18. The interpretation of quartz optically stimulated luminescence equivalent dose versus time plots

    International Nuclear Information System (INIS)

    Bailey, R.M.

    2000-01-01

    Numerical modelling has shown that the form of the quartz OSL shine plateau (hereafter 'D e (t)-plot') is influenced by the effects of phototransferred TL in the ∼110 deg. C region. It is suggested also that the presence of multiple OSL components (as described by Partial bleaching and the decay form characteristics of quartz OSL. Radiat. Meas., 27, 123-136. The form of the optically stimulated luminescence signal of quartz: implications of dating. Unpublished PhD thesis, University of London) affects the form of the D e (t)-plot. Laboratory measurements of a fully reset and artificially dosed sample yielded non-flat D e (t)-plots, the deviation being greater for the larger of the two simulated palaeodoses, in accordance with theoretical predictions. It is suggested that the so-called 'shine plateau' test is of limited use in assessing the bleaching history of quartz sediments

  19. Android and iPhone Apps for Viewing Browse Plots from the Magnetospheric Imaging Instrument (MIMI) on Cassin

    Science.gov (United States)

    Vandegriff, J. D.; Kusterer, M. B.; Byun, S.; Steele, R. J.; Mitchell, D. G.

    2017-12-01

    We present a new mobile app for Android and an existing app for iPhone, both capable of viewing the numerous browse plots available for data collected by the MIMI suite on NASA's Cassini spacecraft. Both apps allow convenient mobile access to pre-made plots of data from various instruments on the suite, including daily, and monthly plots of particle intensities (line plots and spectrograms) from LEMMS, CHEMS and INCA. Also, the apps can show short movies made from sequences of INCA neutral atom images. Browsing the plots or movies is as simple as swiping to the left or right, and the app hides all access details needed to finding the images. Note that the app requires a data connection, since it locates and downloads the plot files live from various instrument team servers. We will demonstrate the current versions of both apps, which are available in Apple's App Store and the Google Play Store.

  20. Graphical Data Analysis on the Circle: Wrap-Around Time Series Plots for (Interrupted) Time Series Designs.

    Science.gov (United States)

    Rodgers, Joseph Lee; Beasley, William Howard; Schuelke, Matthew

    2014-01-01

    Many data structures, particularly time series data, are naturally seasonal, cyclical, or otherwise circular. Past graphical methods for time series have focused on linear plots. In this article, we move graphical analysis onto the circle. We focus on 2 particular methods, one old and one new. Rose diagrams are circular histograms and can be produced in several different forms using the RRose software system. In addition, we propose, develop, illustrate, and provide software support for a new circular graphical method, called Wrap-Around Time Series Plots (WATS Plots), which is a graphical method useful to support time series analyses in general but in particular in relation to interrupted time series designs. We illustrate the use of WATS Plots with an interrupted time series design evaluating the effect of the Oklahoma City bombing on birthrates in Oklahoma County during the 10 years surrounding the bombing of the Murrah Building in Oklahoma City. We compare WATS Plots with linear time series representations and overlay them with smoothing and error bands. Each method is shown to have advantages in relation to the other; in our example, the WATS Plots more clearly show the existence and effect size of the fertility differential.

  1. Optimal plot size in the evaluation of papaya scions: proposal and comparison of methods

    Directory of Open Access Journals (Sweden)

    Humberto Felipe Celanti

    Full Text Available ABSTRACT Evaluating the quality of scions is extremely important and it can be done by characteristics of shoots and roots. This experiment evaluated height of the aerial part, stem diameter, number of leaves, petiole length and length of roots of papaya seedlings. Analyses were performed from a blank trial with 240 seedlings of "Golden Pecíolo Curto". The determination of the optimum plot size was done by applying the methods of maximum curvature, maximum curvature of coefficient of variation and a new proposed method, which incorporates the bootstrap resampling simulation to the maximum curvature method. According to the results obtained, five is the optimal number of seedlings of papaya "Golden Pecíolo Curto" per plot. The proposed method of bootstrap simulation with replacement provides optimal plot sizes equal or higher than the maximum curvature method and provides same plot size than maximum curvature method of the coefficient of variation.

  2. Longitudinal strain bull's eye plot patterns in patients with cardiomyopathy and concentric left ventricular hypertrophy.

    Science.gov (United States)

    Liu, Dan; Hu, Kai; Nordbeck, Peter; Ertl, Georg; Störk, Stefan; Weidemann, Frank

    2016-05-10

    Despite substantial advances in the imaging techniques and pathophysiological understanding over the last decades, identification of the underlying causes of left ventricular hypertrophy by means of echocardiographic examination remains a challenge in current clinical practice. The longitudinal strain bull's eye plot derived from 2D speckle tracking imaging offers an intuitive visual overview of the global and regional left ventricular myocardial function in a single diagram. The bull's eye mapping is clinically feasible and the plot patterns could provide clues to the etiology of cardiomyopathies. The present review summarizes the longitudinal strain, bull's eye plot features in patients with various cardiomyopathies and concentric left ventricular hypertrophy and the bull's eye plot features might serve as one of the cardiac workup steps on evaluating patients with left ventricular hypertrophy.

  3. Relative Efficiency of Split-plot Design (SPD) to Randomized ...

    African Journals Online (AJOL)

    PROF. O. E. OSUAGWU

    2013-06-01

    Jun 1, 2013 ... West African Journal of Industrial and Academic Research Vol.7 No. 1 June .... effects. They concluded that the proposed efficiency measures provide feasible solutions for .... Fm = d.f for the whole-plot treatment; Fb= d.f for the ...

  4. Methodological study of volcanic glass dating by fission track method

    International Nuclear Information System (INIS)

    Araya, A.M.O.

    1987-01-01

    After a description of the method and from the analysis of the age equation we show the methodology used in the plotting of the correction curve and the results of the study of correction curves and corrected ages. From a study of the size correction method we see that the reactor irradiation effect on the curve is negligible and that the correction curve is independent of the thermal treatment but, it depends on chemical treatment and sample. Comparing the corrected ages obtained from both correction method and the ages given by other authors we can conclude that they are in agreement and concerning the plateau method, both isothermal and isochronic plateau give the same results. (author) [pt

  5. [Eugenics, an element of the literary plots of dystopia].

    Science.gov (United States)

    Baum, Ewa; Musielak, Michał

    2007-01-01

    The work presents the ideas and assumptions of eugenics, a social philosophy established in 1883 by Francis Galton, which affected the social policies of numerous European countries in the first half of the 20th century. The work shows the effect of eugenics on the literary standards of European prose in the previous century. Two outstanding dystopian novels of the 20th century, The Brave New World by Aldous Huxley and 1984 by George Orwell, situate eugenics as a permanent element of the literary plot of dystopia. Apart from the typical features of this type of novel, for example: personal narration with a trace of irony, a totalitarian state and Newspeak, eugenics is an important element of the literary plot with is aim to exclude and marginalise certain social groups. Eugenics is also one of the main social ideas criticised by both the writers.

  6. Runoff and soil erosion of field plots in a subtropical mountainous region of China

    Science.gov (United States)

    Fang, N. F.; Wang, L.; Shi, Z. H.

    2017-09-01

    Anthropogenic pressure coupled with strong precipitation events and a mountainous landscape have led to serious soil erosion and associated problems in the subtropical climate zone of China. This study analyzes 1576 rainfall-runoff-soil loss events at 36 experimental plots (a total of 148 plot-years of data) under a wide range of conditions in subtropical mountainous areas of China where slope farming is commonly practiced. The plots, which have standardized dimensions, represent five common types of land use and have four different slopes. Event-based analyses show that almost half of the total rainfall caused soil erosion in the study area. The dominant factor controlling the runoff coefficient is the slope gradient rather than the land use type. The maximum soil lossfor crop plots under steep tillage (35°) is 5004 t km-2 for a single event. Among the common local crops, the average soil loss values increase in the following order: buckwheat soil loss increase in the following order: red clover soil loss is caused by a small number of extreme events. The annual average soil loss of the 44 plots ranges from 19 to 4090 t km-2 year-1. The annual soil loss of plots of different land use types decrease in the following order: bare land (1533 t km-2 year-1) > cropland (1179 t km-2 year-1) > terraced cropland (1083 t km-2 year-1) > orchard land (1020 t km-2 year-1) > grassland (762 t km-2 year-1) > terraced orchard land (297 t km-2 year-1) > forest and grassland (281 t km-2 year-1).

  7. Zooplankton Methodology, Collection & identyification - A field manual

    Digital Repository Service at National Institute of Oceanography (India)

    Goswami, S.C.

    and productivity would largely depend upon the use of correct methodology which involves collection of samples, fixation, preservation, analysis and computation of data. The detailed procedures on all these aspects are given in this manual....

  8. Hard magnetic property and δM(H) plot for sintered NdFeB magnet

    International Nuclear Information System (INIS)

    Gao, R.W.; Zhang, D.H.; Li, W.; Li, X.M.; Zhang, J.C.

    2000-01-01

    The hard magnetic properties and the interactions between the grains for sintered Nd 16 Fe 73 Co 5 B 6 magnets are investigated by using δM(H) plot technique. The results show that the δM(H) plot of NdFeB sintered magnet can explain the effects of the microstructure (size, shape and orientation of the grains) and the intergrain interactions on the hard magnetic properties of the magnet. However, the value of δM(H) is positive when the applied field is not strong enough, which means that the common δM(H) plot theory is not completely consistent with the sintered NdFeB magnet

  9. Customer involvement in greening the supply chain: an interpretive structural modeling methodology

    Science.gov (United States)

    Kumar, Sanjay; Luthra, Sunil; Haleem, Abid

    2013-04-01

    The role of customers in green supply chain management needs to be identified and recognized as an important research area. This paper is an attempt to explore the involvement aspect of customers towards greening of the supply chain (SC). An empirical research approach has been used to collect primary data to rank different variables for effective customer involvement in green concept implementation in SC. An interpretive structural-based model has been presented, and variables have been classified using matrice d' impacts croises- multiplication appliqué a un classement analysis. Contextual relationships among variables have been established using experts' opinions. The research may help practicing managers to understand the interaction among variables affecting customer involvement. Further, this understanding may be helpful in framing the policies and strategies to green SC. Analyzing interaction among variables for effective customer involvement in greening SC to develop the structural model in the Indian perspective is an effort towards promoting environment consciousness.

  10. Governing in the space of the "Seam" : Airport security after the liquid bomb plot

    NARCIS (Netherlands)

    Hoijtink, M.

    This paper provides a detailed study of the liquid bomb plot from 2006, focusing on the ways in which the plot was constituted as “an event unlike others” (Adey, Anderson, and Lobo Guerrero 2011, 340). Engaging with a critical body of scholarship that examines how events are assembled and governed

  11. The pros and cons of funnel plots as an aid to risk communication and patient decision making.

    Science.gov (United States)

    Rakow, Tim; Wright, Rebecca J; Spiegelhalter, David J; Bull, Catherine

    2015-05-01

    Funnel plots, which simultaneously display a sample statistic and the corresponding sample size for multiple cases, have a range of applications. In medicine, they are used to display treatment outcome rates and caseload volume by institution, which can inform strategic decisions about health care delivery. We investigated lay people's understanding of such plots and explored their suitability as an aid to individual treatment decisions. In two studies, 172 participants answered objective questions about funnel plots representing the surgical outcomes (survival or mortality rates) of institutions varying in caseload, and indicated their preferred institutions. Accuracy for extracting objective information was high, unless question phrasing was inconsistent with the plot's survival/mortality framing, or participants had low numeracy levels. Participants integrated caseload-volume and outcome-rate data when forming preferences, but were influenced by reference lines on the plot to make inappropriate discriminations between institutions with similar outcome rates. With careful choice of accompanying language, funnel plots can be readily understood and are therefore a useful tool for communicating risk. However, they are less effective as a decision aid for individual patient's treatment decisions, and we recommend refinements to the standard presentation of the plots if they are to be used for that purpose. © 2014 The British Psychological Society.

  12. Experimental burn plot trial in the Kruger National Park: history, experimental design and suggestions for data analysis

    Directory of Open Access Journals (Sweden)

    R. Biggs

    2003-12-01

    Full Text Available The experimental burn plot (EBP trial initiated in 1954 is one of few ongoing long-termfire ecology research projects in Africa. The trial aims to assess the impacts of differentfire regimes in the Kruger National Park. Recent studies on the EBPs have raised questions as to the experimental design of the trial, and the appropriate model specificationwhen analysing data. Archival documentation reveals that the original design was modified on several occasions, related to changes in the park's fire policy. These modifications include the addition of extra plots, subdivision of plots and changes in treatmentsover time, and have resulted in a design which is only partially randomised. The representativity of the trial plots has been questioned on account of their relatively small size,the concentration of herbivores on especially the frequently burnt plots, and soil variation between plots. It is suggested that these factors be included as covariates inexplanatory models or that certain plots be excluded from data analysis based on resultsof independent studies of these factors. Suggestions are provided for the specificationof the experimental design when analysing data using Analysis of Variance. It is concluded that there is no practical alternative to treating the trial as a fully randomisedcomplete block design.

  13. Poincaré plot analysis of autocorrelation function of RR intervals in patients with acute myocardial infarction.

    Science.gov (United States)

    Chuang, Shin-Shin; Wu, Kung-Tai; Lin, Chen-Yang; Lee, Steven; Chen, Gau-Yang; Kuo, Cheng-Deng

    2014-08-01

    The Poincaré plot of RR intervals (RRI) is obtained by plotting RRIn+1 against RRIn. The Pearson correlation coefficient (ρRRI), slope (SRRI), Y-intercept (YRRI), standard deviation of instantaneous beat-to-beat RRI variability (SD1RR), and standard deviation of continuous long-term RRI variability (SD2RR) can be defined to characterize the plot. Similarly, the Poincaré plot of autocorrelation function (ACF) of RRI can be obtained by plotting ACFk+1 against ACFk. The corresponding Pearson correlation coefficient (ρACF), slope (SACF), Y-intercept (YACF), SD1ACF, and SD2ACF can be defined similarly to characterize the plot. By comparing the indices of Poincaré plots of RRI and ACF between patients with acute myocardial infarction (AMI) and patients with patent coronary artery (PCA), we found that the ρACF and SACF were significantly larger, whereas the RMSSDACF/SDACF and SD1ACF/SD2ACF were significantly smaller in AMI patients. The ρACF and SACF correlated significantly and negatively with normalized high-frequency power (nHFP), and significantly and positively with normalized very low-frequency power (nVLFP) of heart rate variability in both groups of patients. On the contrary, the RMSSDACF/SDACF and SD1ACF/SD2ACF correlated significantly and positively with nHFP, and significantly and negatively with nVLFP and low-/high-frequency power ratio (LHR) in both groups of patients. We concluded that the ρACF, SACF, RMSSDACF/SDACF, and SD1ACF/SD2ACF, among many other indices of ACF Poincaré plot, can be used to differentiate between patients with AMI and patients with PCA, and that the increase in ρACF and SACF and the decrease in RMSSDACF/SDACF and SD1ACF/SD2ACF suggest an increased sympathetic and decreased vagal modulations in both groups of patients.

  14. Split-plot Experiments with Unusual Numbers of Subplot Runs

    DEFF Research Database (Denmark)

    Kulahci, Murat

    2007-01-01

    In many experimental situations, it may not be feasible or even possible to run experiments in a completely randomized fashion as usually recommended. Under these circumstances, split-plot experiments in which certain factors are changed less frequently than the others are often used. Most...

  15. Designing fractional factorial split-plot experiments using integer programming

    DEFF Research Database (Denmark)

    Capehart, Shay R.; Keha, Ahmet; Kulahci, Murat

    2011-01-01

    factorial (FF) design, with the restricted randomisation structure to account for the whole plots and subplots. We discuss the formulation of FFSP designs using integer programming (IP) to achieve various design criteria. We specifically look at the maximum number of clear two-factor interactions...

  16. Soil Characteristics, Microbial Compostion of Plot, Leaf Count and ...

    African Journals Online (AJOL)

    Soil Characteristics, Microbial Compostion of Plot, Leaf Count and Sprout Studies of Cocoyam ( Colocasia [Schott] and Xanthosoma [Schott], Araceae) Collected in Edo State, ... Science, Technology and Arts Research Journal ... Government Areas (LGA) in Edo state and describe them based on leaf count and sprout

  17. Macroecology of Australian Tall Eucalypt Forests: Baseline Data from a Continental-Scale Permanent Plot Network

    Science.gov (United States)

    Wood, Sam W.; Prior, Lynda D.; Stephens, Helen C.; Bowman, David M. J. S.

    2015-01-01

    Tracking the response of forest ecosystems to climate change demands large (≥1 ha) monitoring plots that are repeatedly measured over long time frames and arranged across macro-ecological gradients. Continental scale networks of permanent forest plots have identified links between climate and carbon fluxes by monitoring trends in tree growth, mortality and recruitment. The relationship between tree growth and climate in Australia has been recently articulated through analysis of data from smaller forest plots, but conclusions were limited by (a) absence of data on recruitment and mortality, (b) exclusion of non-eucalypt species, and (c) lack of knowledge of stand age or disturbance histories. To remedy these gaps we established the Ausplots Forest Monitoring Network: a continental scale network of 48 1 ha permanent plots in highly productive tall eucalypt forests in the mature growth stage. These plots are distributed across cool temperate, Mediterranean, subtropical and tropical climates (mean annual precipitation 850 to 1900 mm per year; mean annual temperature 6 to 21°C). Aboveground carbon stocks (AGC) in these forests are dominated by eucalypts (90% of AGC) whilst non-eucalypts in the understorey dominated species diversity and tree abundance (84% of species; 60% of stems). Aboveground carbon stocks were negatively related to mean annual temperature, with forests at the warm end of the temperature range storing approximately half the amount of carbon as forests at the cool end of the temperature range. This may reflect thermal constraints on tree growth detected through other plot networks and physiological studies. Through common protocols and careful sampling design, the Ausplots Forest Monitoring Network will facilitate the integration of tall eucalypt forests into established global forest monitoring initiatives. In the context of projections of rapidly warming and drying climates in Australia, this plot network will enable detection of links between

  18. Comparative evolutionary diversity and phylogenetic structure across multiple forest dynamics plots: a mega-phylogeny approach

    Directory of Open Access Journals (Sweden)

    David Lee Erickson

    2014-11-01

    Full Text Available Forest dynamics plots, which now span longitudes, latitudes, and habitat types across the globe, offer unparalleled insights into the ecological and evolutionary processes that determine how species are assembled into communities. Understanding phylogenetic relationships among species in a community has become an important component of assessing assembly processes. However, the application of evolutionary information to questions in community ecology has been limited in large part by the lack of accurate estimates of phylogenetic relationships among individual species found within communities, and is particularly limiting in comparisons between communities. Therefore, streamlining and maximizing the information content of these community phylogenies is a priority. To test the viability and advantage of a multi-community phylogeny, we constructed a multi-plot mega-phylogeny of 1,347 species of trees across 15 forest dynamics plots in the ForestGEO network using DNA barcode sequence data (rbcL, matK and psbA-trnH and compared community phylogenies for each individual plot with respect to support for topology and branch lengths, which affect evolutionary inference of community processes. The levels of taxonomic differentiation across the phylogeny were examined by quantifying the frequency of resolved nodes throughout. In addition, three phylogenetic distance metrics that are commonly used to infer assembly processes were estimated for each plot (Phylogenetic Distance [PD], Mean Phylogenetic Distance [MPD], and Mean Nearest Taxon Distance [MNTD]. Lastly, we examine the partitioning of phylogenetic diversity among community plots through quantification of inter-community MPD and MNTD. Overall, evolutionary relationships were highly resolved across the DNA barcode-based mega-phylogeny, and phylogenetic resolution for each community plot was improved when estimated within the context of the mega-phylogeny. Likewise, when compared with phylogenies for

  19. A new graphic plot analysis for determination of neuroreceptor binding in positron emission tomography studies.

    Science.gov (United States)

    Ito, Hiroshi; Yokoi, Takashi; Ikoma, Yoko; Shidahara, Miho; Seki, Chie; Naganawa, Mika; Takahashi, Hidehiko; Takano, Harumasa; Kimura, Yuichi; Ichise, Masanori; Suhara, Tetsuya

    2010-01-01

    In positron emission tomography (PET) studies with radioligands for neuroreceptors, tracer kinetics have been described by the standard two-tissue compartment model that includes the compartments of nondisplaceable binding and specific binding to receptors. In the present study, we have developed a new graphic plot analysis to determine the total distribution volume (V(T)) and nondisplaceable distribution volume (V(ND)) independently, and therefore the binding potential (BP(ND)). In this plot, Y(t) is the ratio of brain tissue activity to time-integrated arterial input function, and X(t) is the ratio of time-integrated brain tissue activity to time-integrated arterial input function. The x-intercept of linear regression of the plots for early phase represents V(ND), and the x-intercept of linear regression of the plots for delayed phase after the equilibrium time represents V(T). BP(ND) can be calculated by BP(ND)=V(T)/V(ND)-1. Dynamic PET scanning with measurement of arterial input function was performed on six healthy men after intravenous rapid bolus injection of [(11)C]FLB457. The plot yielded a curve in regions with specific binding while it yielded a straight line through all plot data in regions with no specific binding. V(ND), V(T), and BP(ND) values calculated by the present method were in good agreement with those by conventional non-linear least-squares fitting procedure. This method can be used to distinguish graphically whether the radioligand binding includes specific binding or not.

  20. Analysis of a Split-Plot Experimental Design Applied to a Low-Speed Wind Tunnel Investigation

    Science.gov (United States)

    Erickson, Gary E.

    2013-01-01

    A procedure to analyze a split-plot experimental design featuring two input factors, two levels of randomization, and two error structures in a low-speed wind tunnel investigation of a small-scale model of a fighter airplane configuration is described in this report. Standard commercially-available statistical software was used to analyze the test results obtained in a randomization-restricted environment often encountered in wind tunnel testing. The input factors were differential horizontal stabilizer incidence and the angle of attack. The response variables were the aerodynamic coefficients of lift, drag, and pitching moment. Using split-plot terminology, the whole plot, or difficult-to-change, factor was the differential horizontal stabilizer incidence, and the subplot, or easy-to-change, factor was the angle of attack. The whole plot and subplot factors were both tested at three levels. Degrees of freedom for the whole plot error were provided by replication in the form of three blocks, or replicates, which were intended to simulate three consecutive days of wind tunnel facility operation. The analysis was conducted in three stages, which yielded the estimated mean squares, multiple regression function coefficients, and corresponding tests of significance for all individual terms at the whole plot and subplot levels for the three aerodynamic response variables. The estimated regression functions included main effects and two-factor interaction for the lift coefficient, main effects, two-factor interaction, and quadratic effects for the drag coefficient, and only main effects for the pitching moment coefficient.

  1. Offline coupling of high-speed counter-current chromatography and gas chromatography/mass spectrometry generates a two-dimensional plot of toxaphene components.

    Science.gov (United States)

    Kapp, Thomas; Vetter, Walter

    2009-11-20

    High-speed counter-current chromatography (HSCCC), a separation technique based solely on the partitioning of solutes between two immiscible liquid phases, was applied for the fractionation of technical toxaphene, an organochlorine pesticide which consists of a complex mixture of structurally closely related compounds. A solvent system (n-hexane/methanol/water 34:24:1, v/v/v) was developed which allowed to separate compounds of technical toxaphene (CTTs) with excellent retention of the stationary phase (S(f) = 88%). Subsequent analysis of all HSCCC fractions by gas chromatography coupled to electron-capture negative ion mass spectrometry (GC/ECNI-MS) provided a wealth of information regarding separation characteristics of HSCCC and the composition of technical toxaphene. The visualization of the large amount of data obtained from the offline two-dimensional HSCCC-GC/ECNI-MS experiment was facilitated by the creation of a two-dimensional (2D) contour plot. The contour plot not only provided an excellent overview of the HSCCC separation progress, it also illustrated the differences in selectivity between HSCCC and GC. The results of this proof-of-concept study showed that the 2D chromatographic approach involving HSCCC facilitated the separation of CTTs that coelute in unidimensional GC. Furthermore, the creation of 2D contour plots may provide a useful means of enhancing data visualization for other offline two-dimensional separations.

  2. A methodology to describe process control requirements

    International Nuclear Information System (INIS)

    Carcagno, R.; Ganni, V.

    1994-01-01

    This paper presents a methodology to describe process control requirements for helium refrigeration plants. The SSC requires a greater level of automation for its refrigeration plants than is common in the cryogenics industry, and traditional methods (e.g., written descriptions) used to describe process control requirements are not sufficient. The methodology presented in this paper employs tabular and graphic representations in addition to written descriptions. The resulting document constitutes a tool for efficient communication among the different people involved in the design, development, operation, and maintenance of the control system. The methodology is not limited to helium refrigeration plants, and can be applied to any process with similar requirements. The paper includes examples

  3. EVALPLOT2007, ENDF Plots Cross Section, Angular Distribution and Energy Distribution

    International Nuclear Information System (INIS)

    2007-01-01

    1 - Description of program or function: EVALPLOT is designed to plot evaluated cross sections in the ENDF/B format. The program plots cross sections, angular distributions, energy distributions and other parameters. IAEA1322/16: This version include the updates up to January 30, 2007. Changes in ENDF/B-VII Format and procedures, as well as the evaluations themselves, make it impossible for versions of the ENDF/B pre-processing codes earlier than PREPRO 2007 (2007 Version) to accurately process current ENDF/B-VII evaluations. The present code can handle all existing ENDF/B-VI evaluations through release 8, which will be the last release of ENDF/B-VI. Modifications from previous versions: Evalplot Vers. 2007-1 (Jan. 2007): - checked against all ENDF/B-VII; - increased page size from 600,000 to 2,400,000; - increased the number of energies vs. legendre coefficients from 20,000 to 80,000 (must be 1/30 page size); - added (n,remainder) to first plot. 2 - Method of solution: In the case of processing neutron and photon cross sections (MF=3 or 23) and parameters (MF=1 or 27), all data in a file (MF) is read, grouped together by type, and plotted. All reactions of a data type appear on the same plot. The data types for MF=1 and 3 (neutrons) are: (1) total, elastic, capture, fission and total inelastic; (2) (n,2n), (n,3n) and (n,n' charged particle); (3) (n,charged particle); (4) particle production (proton, deuteron, etc.) and damage; (5) total, first, second, etc. chance fission; (6) total inelastic, inelastic discrete levels and continuum; (7) (n,p) total and levels (only if levels are given); (8) (n,d) total and levels (only if levels are given); (9) (n,t) total and levels (only if levels are given); (10) (n, 3 He) total and levels (only if levels are given); (11) (n, 4 He) total and levels (only if levels are given); (12) parameters mu-bar, xi and gamma; (13) nu-bar - total, prompt an delayed. The data types for MF=23 and 27 (photons) are: (14) total, coherent

  4. Effects of logging and recruitment on community phylogenetic structure in 32 permanent forest plots of Kampong Thom, Cambodia

    OpenAIRE

    Toyama, Hironori; Kajisa, Tsuyoshi; Tagane, Shuichiro; Mase, Keiko; Chhang, Phourin; Samreth, Vanna; Ma, Vuthy; Sokh, Heng; Ichihashi, Ryuji; Onoda, Yusuke; Mizoue, Nobuya; Yahara, Tetsukazu

    2015-01-01

    Ecological communities including tropical rainforest are rapidly changing under various disturbances caused by increasing human activities. Recently in Cambodia, illegal logging and clear-felling for agriculture have been increasing. Here, we study the effects of logging, mortality and recruitment of plot trees on phylogenetic community structure in 32 plots in Kampong Thom, Cambodia. Each plot was 0.25 ha; 28 plots were established in primary evergreen forests and four were established in se...

  5. Runoff and soil erosion plot-scale studies under natural rainfall: A meta-analysis of the Brazilian experience

    Science.gov (United States)

    Research to measure soil erosion rates in the United States from natural rainfall runoff plots began in the early 1900’s. In Brazil, the first experimental study at the plot-scale was conducted in the 1940’s; however, the monitoring process and the creation of new experimental field plots have not c...

  6. SCALPLO - a universal program for plotting flux output from SCALE modules and related programs. User`s manual

    Energy Technology Data Exchange (ETDEWEB)

    Hersman, A; Leege, P F.A. de; Hoogenboom, J E

    1992-04-01

    The FORTRAN-77 program SCALPLO is being developed to make an easy and quick graphic survey of flux and/or power data calculated with SCALE modules or other core calculation or shielding codes. The basic plot functions it can perform are one- and two-dimensional plots of flux or power distributions and flux energy spectra. More specifically it can produce plots of the flux distribution in a one-dimensional geometry for one or more energy groups in one figure. It can also plot the flux distribution along a cut through a two- or three-dimensional geometry along one of the coordinate axes and it can plot a two-dimensional view of the flux distribution of a two-dimensional geometry or of a plane cut through a three-dimensional geometry. The same can be done for the power distribution in a system. Furthermore SCALPLO can plot the particle flux spectrum as a function of energy, either as group fluxes or as group fluxes per unit energy or per unit lethargy. (orig./HP).

  7. Using recurrence plot analysis for software execution interpretation and fault detection

    Science.gov (United States)

    Mosdorf, M.

    2015-09-01

    This paper shows a method targeted at software execution interpretation and fault detection using recurrence plot analysis. In in the proposed approach recurrence plot analysis is applied to software execution trace that contains executed assembly instructions. Results of this analysis are subject to further processing with PCA (Principal Component Analysis) method that simplifies number coefficients used for software execution classification. This method was used for the analysis of five algorithms: Bubble Sort, Quick Sort, Median Filter, FIR, SHA-1. Results show that some of the collected traces could be easily assigned to particular algorithms (logs from Bubble Sort and FIR algorithms) while others are more difficult to distinguish.

  8. [Extraction and recognition of attractors in three-dimensional Lorenz plot].

    Science.gov (United States)

    Hu, Min; Jang, Chengfan; Wang, Suxia

    2018-02-01

    Lorenz plot (LP) method which gives a global view of long-time electrocardiogram signals, is an efficient simple visualization tool to analyze cardiac arrhythmias, and the morphologies and positions of the extracted attractors may reveal the underlying mechanisms of the onset and termination of arrhythmias. But automatic diagnosis is still impossible because it is lack of the method of extracting attractors by now. We presented here a methodology of attractor extraction and recognition based upon homogeneously statistical properties of the location parameters of scatter points in three dimensional LP (3DLP), which was constructed by three successive RR intervals as X , Y and Z axis in Cartesian coordinate system. Validation experiments were tested in a group of RR-interval time series and tags data with frequent unifocal premature complexes exported from a 24-hour Holter system. The results showed that this method had excellent effective not only on extraction of attractors, but also on automatic recognition of attractors by the location parameters such as the azimuth of the points peak frequency ( A PF ) of eccentric attractors once stereographic projection of 3DLP along the space diagonal. Besides, A PF was still a powerful index of differential diagnosis of atrial and ventricular extrasystole. Additional experiments proved that this method was also available on several other arrhythmias. Moreover, there were extremely relevant relationships between 3DLP and two dimensional LPs which indicate any conventional achievement of LPs could be implanted into 3DLP. It would have a broad application prospect to integrate this method into conventional long-time electrocardiogram monitoring and analysis system.

  9. Investigating surety methodologies for cognitive systems.

    Energy Technology Data Exchange (ETDEWEB)

    Caudell, Thomas P. (University of New Mexico, Albuquerque, NM); Peercy, David Eugene; Mills, Kristy (University of New Mexico, Albuquerque, NM); Caldera, Eva (University of New Mexico, Albuquerque, NM)

    2006-11-01

    Advances in cognitive science provide a foundation for new tools that promise to advance human capabilities with significant positive impacts. As with any new technology breakthrough, associated technical and non-technical risks are involved. Sandia has mitigated both technical and non-technical risks by applying advanced surety methodologies in such areas as nuclear weapons, nuclear reactor safety, nuclear materials transport, and energy systems. In order to apply surety to the development of cognitive systems, we must understand the concepts and principles that characterize the certainty of a system's operation as well as the risk areas of cognitive sciences. This SAND report documents a preliminary spectrum of risks involved with cognitive sciences, and identifies some surety methodologies that can be applied to potentially mitigate such risks. Some potential areas for further study are recommended. In particular, a recommendation is made to develop a cognitive systems epistemology framework for more detailed study of these risk areas and applications of surety methods and techniques.

  10. Methodology for generating waste volume estimates

    International Nuclear Information System (INIS)

    Miller, J.Q.; Hale, T.; Miller, D.

    1991-09-01

    This document describes the methodology that will be used to calculate waste volume estimates for site characterization and remedial design/remedial action activities at each of the DOE Field Office, Oak Ridge (DOE-OR) facilities. This standardized methodology is designed to ensure consistency in waste estimating across the various sites and organizations that are involved in environmental restoration activities. The criteria and assumptions that are provided for generating these waste estimates will be implemented across all DOE-OR facilities and are subject to change based on comments received and actual waste volumes measured during future sampling and remediation activities. 7 figs., 8 tabs

  11. Measurement of the ω→π+π−π0 Dalitz plot distribution

    Directory of Open Access Journals (Sweden)

    P. Adlarson

    2017-07-01

    Full Text Available Using the production reactions pd→He3ω and pp→ppω, the Dalitz plot distribution for the ω→π+π−π0 decay is studied with the WASA detector at COSY, based on a combined data sample of (4.408±0.042×104 events. The Dalitz plot density is parametrised by a product of the P-wave phase space and a polynomial expansion in the normalised polar Dalitz plot variables Z and ϕ. For the first time, a deviation from pure P-wave phase space is observed with a significance of 4.1σ. The deviation is parametrised by a linear term 1+2αZ, with α determined to be +0.147±0.036, consistent with the expectations of ρ-meson-type final-state interactions of the P-wave pion pairs.

  12. Dispersion-theoretical analysis of the D + → K - π + π + Dalitz plot

    Science.gov (United States)

    Niecknig, Franz; Kubis, Bastian

    2015-10-01

    We study the Dalitz plot of the Cabibbo-favored charmed-meson decay D + → K -π+π+ using dispersion theory. The formalism respects all constraints from analyticity and unitarity, and consistently describes final-state interactions between all three decay products. We employ pion-pion and pion-kaon phase shifts as input, and fit the pertinent subtraction constants to Dalitz plot data by the CLEO and FOCUS collaborations. Phase motions of resonant as well as nonresonant amplitudes are discussed, which should provide crucial input for future studies of CP violation in similar three-body charm decays.

  13. An automatized frequency analysis for vine plot detection and delineation in remote sensing

    OpenAIRE

    Delenne , Carole; Rabatel , G.; Deshayes , M.

    2008-01-01

    The availability of an automatic tool for vine plot detection, delineation, and characterization would be very useful for management purposes. An automatic and recursive process using frequency analysis (with Fourier transform and Gabor filters) has been developed to meet this need. This results in the determination of vine plot boundary and accurate estimation of interrow width and row orientation. To foster large-scale applications, tests and validation have been carried out on standard ver...

  14. Selecting the optimum plot size for a California design-based stream and wetland mapping program.

    Science.gov (United States)

    Lackey, Leila G; Stein, Eric D

    2014-04-01

    Accurate estimates of the extent and distribution of wetlands and streams are the foundation of wetland monitoring, management, restoration, and regulatory programs. Traditionally, these estimates have relied on comprehensive mapping. However, this approach is prohibitively resource-intensive over large areas, making it both impractical and statistically unreliable. Probabilistic (design-based) approaches to evaluating status and trends provide a more cost-effective alternative because, compared with comprehensive mapping, overall extent is inferred from mapping a statistically representative, randomly selected subset of the target area. In this type of design, the size of sample plots has a significant impact on program costs and on statistical precision and accuracy; however, no consensus exists on the appropriate plot size for remote monitoring of stream and wetland extent. This study utilized simulated sampling to assess the performance of four plot sizes (1, 4, 9, and 16 km(2)) for three geographic regions of California. Simulation results showed smaller plot sizes (1 and 4 km(2)) were most efficient for achieving desired levels of statistical accuracy and precision. However, larger plot sizes were more likely to contain rare and spatially limited wetland subtypes. Balancing these considerations led to selection of 4 km(2) for the California status and trends program.

  15. Poincaré plot indexes of heart rate variability detect dynamic autonomic modulation during general anesthesia induction.

    Science.gov (United States)

    Hsu, Che-Hao; Tsai, Ming-Ya; Huang, Go-Shine; Lin, Tso-Chou; Chen, Kuen-Pao; Ho, Shung-Tai; Shyu, Liang-Yu; Li, Chi-Yuan

    2012-03-01

    Beat-to-beat heart rate variability (HRV) is caused by the fluctuating balance of sympathetic and parasympathetic tone. The Poincaré plot has been used to evaluate HRV. In this study, we validate that this new method may qualitatively and quantitatively assess the sympathovagal fluctuation in patients during induction of anesthesia with sevoflurane. Twenty-eight young patients were allocated for the study. The patients received a tilt test and on the next day they sustained anesthesia induced with inhaled anesthetics. Electrocardiography signals from the patients were relayed to an analogue-digital converter. The Poincaré plot is quantified by measuring SD1, SD2, and SD1/SD2. Power spectral analyses were performed and LF, HF and HF/LF were calculated. The LF power and the SD2 of the Poincaré plot increased while subjects were tilt-up from the supine position. Additionally, a significant correlation were found between LF and SD2, HF and SD1 (p plot respectively. However, the LF, SD2 and LF/HF increased; the HF, SD1 and SD1/SD2 ratio decreased after intubation stimulation. Poincaré plot and power spectral analysis of HRV during tilt test and sevoflurane induction significantly correlate. Poincaré plot analysis is easier and more sensitive at evaluating the sympathovagal balance and observing the beat-to-beat HRV. Copyright © 2012. Published by Elsevier B.V.

  16. The impact of distance to the farm compound on the options for use of the cereal plot

    Directory of Open Access Journals (Sweden)

    K. TAMM

    2008-12-01

    Full Text Available In increasingly competitive conditions, the dominant trend of enlarging the production area of farms is causing a growth in transportation costs making the profitability of cultivating distant plots questionable. The aim of this study was to provide a method to evaluate the rationality of using a plot depending on its distance, area and cultivation technology. An algorithm and a mathematical model were composed to calculate the total costs depending on the distance to the plot. The transportation costs of machines and materials, cost of organisational travel and timeliness costs are taken into account in the model to enable determination of the maximum distance or the minimum area of the plot necessary for profitable cultivation. Simulations allow us to conclude that the growth in yield and selling price of the production allow an increase in the limit value of driving costs and, thus, the profitable distance of the plot; on the other hand, it means also an increase of timeliness costs as a limitation for extending distance. Exploitation of more distant plots can be uneconomical in coming years because of increasing fuel costs.;

  17. Health economic evaluation: important principles and methodology.

    Science.gov (United States)

    Rudmik, Luke; Drummond, Michael

    2013-06-01

    To discuss health economic evaluation and improve the understanding of common methodology. This article discusses the methodology for the following types of economic evaluations: cost-minimization, cost-effectiveness, cost-utility, cost-benefit, and economic modeling. Topics include health-state utility measures, the quality-adjusted life year (QALY), uncertainty analysis, discounting, decision tree analysis, and Markov modeling. Economic evaluation is the comparative analysis of alternative courses of action in terms of both their costs and consequences. With increasing health care expenditure and limited resources, it is important for physicians to consider the economic impact of their interventions. Understanding common methodology involved in health economic evaluation will improve critical appraisal of the literature and optimize future economic evaluations. Copyright © 2012 The American Laryngological, Rhinological and Otological Society, Inc.

  18. Using contour plots in elecgroproduction to examine regions in {epsilon}, Q{sup 2}, W space

    Energy Technology Data Exchange (ETDEWEB)

    Funsten, H. [College of William and Mary, Williamsburg, VA (United States)

    1994-04-01

    In determining incident CEBAF beam energies for CLAS electroproduction experiments that separate the longitudinal and transverse cross section components, contour plots of {epsilon} defined over a 2 dimensional Q{sup 2}, W space can be useful. This note describes an approximate method of constructing such plots.

  19. Texture Analysis of Recurrence Plots Based on Wavelets and PSO for Laryngeal Pathologies Detection.

    Science.gov (United States)

    Souza, Taciana A; Vieira, Vinícius J D; Correia, Suzete E N; Costa, Silvana L N C; de A Costa, Washington C; Souza, Micael A

    2015-01-01

    This paper deals with the discrimination between healthy and pathological speech signals using recurrence plots and wavelet transform with texture features. Approximation and detail coefficients are obtained from the recurrence plots using Haar wavelet transform, considering one decomposition level. The considered laryngeal pathologies are: paralysis, Reinke's edema and nodules. Accuracy rates above 86% were obtained by means of the employed method.

  20. Review article: The mountain motif in the plot of Matthew

    Directory of Open Access Journals (Sweden)

    Gert J. Volschenk

    2010-09-01

    Full Text Available This article reviewed T.L. Donaldson’s book, Jesus on the mountain: A study in Matthean theology, published in 1985 by JSOT Press, Sheffield, and focused on the mountain motif in the structure and plot of the Gospel of Matthew, in addition to the work of Donaldson on the mountain motif as a literary motif and as theological symbol. The mountain is a primary theological setting for Jesus’ ministry and thus is an important setting, serving as one of the literary devices by which Matthew structured and progressed his narrative. The Zion theological and eschatological significance and Second Temple Judaism serve as the historical and theological background for the mountain motif. The last mountain setting (Mt 28:16–20 is the culmination of the three theological themes in the plot of Matthew, namely Christology, ecclesiology and salvation history.

  1. Common angle plots as perception-true visualizations of categorical associations.

    Science.gov (United States)

    Hofmann, Heike; Vendettuoli, Marie

    2013-12-01

    Visualizations are great tools of communications-they summarize findings and quickly convey main messages to our audience. As designers of charts we have to make sure that information is shown with a minimum of distortion. We have to also consider illusions and other perceptual limitations of our audience. In this paper we discuss the effect and strength of the line width illusion, a Muller-Lyer type illusion, on designs related to displaying associations between categorical variables. Parallel sets and hammock plots are both affected by line width illusions. We introduce the common-angle plot as an alternative method for displaying categorical data in a manner that minimizes the effect from perceptual illusions. Results from user studies both highlight the need for addressing line-width illusions in displays and provide evidence that common angle charts successfully resolve this issue.

  2. PLOTnFIT: A BASIC program for data plotting and curve fitting

    Energy Technology Data Exchange (ETDEWEB)

    Schiffgens, J O

    1989-10-01

    PLOTnFIT is a BASIC program to be used with an IBM or IBM-compatible personal computer (PC) for plotting and fitting curves to measured or observed data for both extrapolation and interpolation. It uses the Least Squares method to calculate the coefficients of nth degree polynomials (e.g., up to 10th degree) of Basis Functions so that each polynomial fits the data in a Least Squares sense, then plots the data and the polynomial that a user decides best represents them. PLOTnFIT is very versatile. It can be used to generate linear, semilog, and log-log graphs and can automatically scale the coordinate axes to suit the data. It can plot more than one data set on a graph (e.g., up to 8 data sets) and more data points than a user is likely to put on one graph (e.g., up to 225 points). A PC diskette containing (1) READIST.PNF (a summary of this NUREG), (2) INI06891.SIS and FOL06891.SIS (two data files), and 3) PLOTNFIT.4TH (the latest version of the program) may be obtained from the National Energy Software Center, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL 60439. (author)

  3. Omitted Variable Sensitivity Analysis with the Annotated Love Plot

    Science.gov (United States)

    Hansen, Ben B.; Fredrickson, Mark M.

    2014-01-01

    The goal of this research is to make sensitivity analysis accessible not only to empirical researchers but also to the various stakeholders for whom educational evaluations are conducted. To do this it derives anchors for the omitted variable (OV)-program participation association intrinsically, using the Love plot to present a wide range of…

  4. METHODOLOGICAL ISSUES OF CLINICAL TRIALS IN THE PEDIATRIC POPULATION

    Directory of Open Access Journals (Sweden)

    S.V. Topolyanskaya

    2010-01-01

    Full Text Available Conducting clinical trials on children population is a challenge both for organizers and pediatricians involved in trials. Difficulties in recruiting patients, a significant heterogenecity of the population, specific side reactions, difficulties in identifying the objective final points warrant the specific nature of designing clinical trials in pediatrics. The article illustrates key issues and methodology aspects: planning, design, control groups, patient recruitment. It stresses the need to carefully consider specific characteristics of a child’s system and multi-disciplinary approach involving a pediatrician at the early stages of planning, preliminary consultations with parent organizations, children and regulators.Key words: clinical trials, methodology, planning, design, patient recruitment, children. (Pediatric Pharmacology. – 2010; 7(5:6-10

  5. Direct fabrication of high-resolution three-dimensional polymeric scaffolds using electrohydrodynamic hot jet plotting

    International Nuclear Information System (INIS)

    Wei, Chuang; Dong, Jingyan

    2013-01-01

    This paper presents the direct three-dimensional (3D) fabrication of polymer scaffolds with sub-10 µm structures using electrohydrodynamic jet (EHD-jet) plotting of melted thermoplastic polymers. Traditional extrusion-based fabrication approaches of 3D periodic porous structures are very limited in their resolution, due to the excessive pressure requirement for extruding highly viscous thermoplastic polymers. EHD-jet printing has become a high-resolution alternative to other forms of nozzle deposition-based fabrication approaches by generating micro-scale liquid droplets or a fine jet through the application of a large electrical voltage between the nozzle and the substrate. In this study, we successfully apply EHD-jet plotting technology with melted biodegradable polymer (polycaprolactone, or PCL) for the fabrication of 2D patterns and 3D periodic porous scaffold structures in potential tissue engineering applications. Process conditions (e.g. electrical voltage, pressure, plotting speed) have been thoroughly investigated to achieve reliable jet printing of fine filaments. We have demonstrated for the first time that the EHD-jet plotting process is capable of the fabrication of 3D periodic structures with sub-10 µm resolution, which has great potential in advanced biomedical applications, such as cell alignment and guidance. (paper)

  6. Crop residue decomposition in Minnesota biochar amended plots

    OpenAIRE

    S. L. Weyers; K. A. Spokas

    2014-01-01

    Impacts of biochar application at laboratory scales are routinely studied, but impacts of biochar application on decomposition of crop residues at field scales have not been widely addressed. The priming or hindrance of crop residue decomposition could have a cascading impact on soil processes, particularly those influencing nutrient availability. Our objectives were to evaluate biochar effects on field decomposition of crop residue, using plots that were amended with ...

  7. Relative equilibrium plot improves graphical analysis and allows bias correction of SUVR in quantitative [11C]PiB PET studies

    Science.gov (United States)

    Zhou, Yun; Sojkova, Jitka; Resnick, Susan M.; Wong, Dean F.

    2012-01-01

    Both the standardized uptake value ratio (SUVR) and the Logan plot result in biased distribution volume ratios (DVR) in ligand-receptor dynamic PET studies. The objective of this study is to use a recently developed relative equilibrium-based graphical plot (RE plot) method to improve and simplify the two commonly used methods for quantification of [11C]PiB PET. Methods The overestimation of DVR in SUVR was analyzed theoretically using the Logan and the RE plots. A bias-corrected SUVR (bcSUVR) was derived from the RE plot. Seventy-eight [11C]PiB dynamic PET scans (66 from controls and 12 from mildly cognitively impaired participants (MCI) from the Baltimore Longitudinal Study of Aging (BLSA)) were acquired over 90 minutes. Regions of interest (ROIs) were defined on coregistered MRIs. Both the ROI and pixelwise time activity curves (TACs) were used to evaluate the estimates of DVR. DVRs obtained using the Logan plot applied to ROI TACs were used as a reference for comparison of DVR estimates. Results Results from the theoretical analysis were confirmed by human studies. ROI estimates from the RE plot and the bcSUVR were nearly identical to those from the Logan plot with ROI TACs. In contrast, ROI estimates from DVR images in frontal, temporal, parietal, cingulate regions, and the striatum were underestimated by the Logan plot (controls 4 – 12%; MCI 9 – 16%) and overestimated by the SUVR (controls 8 – 16%; MCI 16 – 24%). This bias was higher in the MCI group than in controls (p plot or the bcSUVR. Conclusion The RE plot improves pixel-wise quantification of [11C]PiB dynamic PET compared to the conventional Logan plot. The bcSUVR results in lower bias and higher consistency of DVR estimates compared to SUVR. The RE plot and the bcSUVR are practical quantitative approaches that improve the analysis of [11C]PiB studies. PMID:22414634

  8. 36 CFR 9.42 - Well records and reports, plots and maps, samples, tests and surveys.

    Science.gov (United States)

    2010-07-01

    ... Well records and reports, plots and maps, samples, tests and surveys. Any technical data gathered... 36 Parks, Forests, and Public Property 1 2010-07-01 2010-07-01 false Well records and reports, plots and maps, samples, tests and surveys. 9.42 Section 9.42 Parks, Forests, and Public Property...

  9. Automated remedial assessment methodology software system

    International Nuclear Information System (INIS)

    Whiting, M.; Wilkins, M.; Stiles, D.

    1994-11-01

    The Automated Remedial Analysis Methodology (ARAM) software system has been developed by the Pacific Northwest Laboratory to assist the U.S. Department of Energy (DOE) in evaluating cleanup options for over 10,000 contaminated sites across the DOE complex. The automated methodology comprises modules for decision logic diagrams, technology applicability and effectiveness rules, mass balance equations, cost and labor estimating factors and equations, and contaminant stream routing. ARAM is used to select technologies for meeting cleanup targets; determine the effectiveness of the technologies in destroying, removing, or immobilizing contaminants; decide the nature and amount of secondary waste requiring further treatment; and estimate the cost and labor involved when applying technologies

  10. Methodological update in Medicina Intensiva.

    Science.gov (United States)

    García Garmendia, J L

    2018-04-01

    Research in the critically ill is complex by the heterogeneity of patients, the difficulties to achieve representative sample sizes and the number of variables simultaneously involved. However, the quantity and quality of records is high as well as the relevance of the variables used, such as survival. The methodological tools have evolved to offering new perspectives and analysis models that allow extracting relevant information from the data that accompanies the critically ill patient. The need for training in methodology and interpretation of results is an important challenge for the intensivists who wish to be updated on the research developments and clinical advances in Intensive Medicine. Copyright © 2017 Elsevier España, S.L.U. y SEMNIM. All rights reserved.

  11. Conjugate gradient based projection - A new explicit methodology for frictional contact

    Science.gov (United States)

    Tamma, Kumar K.; Li, Maocheng; Sha, Desong

    1993-01-01

    With special attention towards the applicability to parallel computation or vectorization, a new and effective explicit approach for linear complementary formulations involving a conjugate gradient based projection methodology is proposed in this study for contact problems with Coulomb friction. The overall objectives are focussed towards providing an explicit methodology of computation for the complete contact problem with friction. In this regard, the primary idea for solving the linear complementary formulations stems from an established search direction which is projected to a feasible region determined by the non-negative constraint condition; this direction is then applied to the Fletcher-Reeves conjugate gradient method resulting in a powerful explicit methodology which possesses high accuracy, excellent convergence characteristics, fast computational speed and is relatively simple to implement for contact problems involving Coulomb friction.

  12. From research plots to prototype biomass plantations

    Energy Technology Data Exchange (ETDEWEB)

    Kenney, W.A.; Vanstone, B.J.; Gambles, R.L.; Zsuffa, L. [Univ. of Toronto, Ontario (Canada)

    1993-12-31

    The development of biomass energy plantations is now expanding from the research plot phase into the next level of development at larger scale plantings. This is necessary to provide: more accurate information on biomass yields, realistic production cost figures, venues to test harvesting equipment, demonstration sites for potential producers, and a supply of feedstock for prototype conversion facilities. The paper will discuss some of these objectives and some of the challenges encountered in the scale-up process associated with a willow prototype plantation project currently under development in Eastern Canada.

  13. [The characteristics of RR-Lorenz plot in persistent atrial fibrillation patients complicating with escape beats and rhythm].

    Science.gov (United States)

    Pan, Yunping; Zhang, Fangfang; Liu, Ru; Jing, Yan; Shen, Jihong; Li, Zhongjian; Zhu, Huaijie

    2014-06-01

    To explore the characteristics of RR-Lorenz plot in persistent atrial fibrillation (AF) patients complicating with escape beats and rhythm though ambulatory electrocardiogram. The 24-hour ambulatory electrocardiogram of 291 persistent AF patients in second affiliated hospital of Zhengzhou university from July 2005 to April 2013 were retrospectively analyzed and the RR interval and the QRS wave were measured. Patients were divided into two groups according to the distribution of the RR-Lorenz point [AF without escape beats and rhythm group (Group A, n = 259) and AF with escape beats and rhythm group (Group B, n = 32)]. The characteristics of RR-Lorenz plot between the two groups were compared. (1) Fan-shaped RR-Lorenz plots were evidenced in Group A. (2)In Group B, 30 cases showed fan-shaped with L-shaped and a short dense rods along 45° line. The proportion of escape beats and rhythm was 0.28% (275/98 369) -14.06% (11 263/80 112) . The other 2 cases in group B showed no typical RR-Lorenz plots features. RR-Lorenz plot could help to quickly diagnose persistent AF complicating with escape beats and rhythm according to the typical RR-Lorenz plot characteristics in 24-hour ambulatory electrocardiogram.

  14. Computational Drafting of Plot Structures for Russian Folk Tales.

    Science.gov (United States)

    Gervás, Pablo

    The plots of stories are known to follow general patterns in terms of their overall structure. This was the basic tenet of structuralist approaches to narratology. Vladimir Propp proposed a procedure for the generation of new tales based on his semi-formal description of the structure of Russian folk tales. This is one of the first existing instances of a creative process described procedurally. The present paper revisits Propp's morphology to build a system that generates instances of Russian folk tales. Propp's view of the folk tale as a rigid sequence of character functions is employed as a plot driver, and some issues that Propp declared relevant but did not explore in detail-such as long-range dependencies between functions or the importance of endings-are given computational shape in the context of a broader architecture that captures all the aspects discussed by Propp. A set of simple evaluation metrics for the resulting outputs is defined inspired on Propp's formalism. The potential of the resulting system for providing a creative story generation system is discussed, and possible lines of future work are discussed.

  15. Calibration of multivariate scatter plots for exploratory analysis of relations within and between sets of variables in genomic research

    NARCIS (Netherlands)

    Graffelman, J.; Eeuwijk, van F.A.

    2005-01-01

    The scatter plot is a well known and easily applicable graphical tool to explore relationships between two quantitative variables. For the exploration of relations between multiple variables, generalisations of the scatter plot are useful. We present an overview of multivariate scatter plots

  16. Point and Fixed Plot Sampling Inventory Estimates at the Savannah River Site, South Carolina.

    Energy Technology Data Exchange (ETDEWEB)

    Parresol, Bernard, R.

    2004-02-01

    This report provides calculation of systematic point sampling volume estimates for trees greater than or equal to 5 inches diameter breast height (dbh) and fixed radius plot volume estimates for trees < 5 inches dbh at the Savannah River Site (SRS), Aiken County, South Carolina. The inventory of 622 plots was started in March 1999 and completed in January 2002 (Figure 1). Estimates are given in cubic foot volume. The analyses are presented in a series of Tables and Figures. In addition, a preliminary analysis of fuel levels on the SRS is given, based on depth measurements of the duff and litter layers on the 622 inventory plots plus line transect samples of down coarse woody material. Potential standing live fuels are also included. The fuels analyses are presented in a series of tables.

  17. A new method to study ferroelectrics using the remanent Henkel plots

    Science.gov (United States)

    Vopson, Melvin M.

    2018-05-01

    Analysis of experimental curves constructed from dc demagnetization and isothermal remanent magnetization known as Henkel and delta M plots, have served for over 53 years as an important tool for characterization of interactions in ferromagnets. In this article we address the question whether the same experimental technique could be applied to the study of ferroelectric systems. The successful measurement of the equivalent dc depolarisation and isothermal remanent polarization curves and the construction of the Henkel and delta P plots for ferroelectrics is reported here. Full measurement protocol is provided together with experimental examples for two ferroelectric ceramic samples. This new measurement technique is an invaluable experimental tool that could be used to further advance our understanding of ferroelectric materials and their applications.

  18. European Vegetation Archive (EVA): an integrated database of European vegetation plots

    DEFF Research Database (Denmark)

    Chytrý, M; Hennekens, S M; Jiménez-Alfaro, B

    2015-01-01

    vegetation- plot databases on a single software platform. Data storage in EVA does not affect on-going independent development of the contributing databases, which remain the property of the data contributors. EVA uses a prototype of the database management software TURBOVEG 3 developed for joint management......The European Vegetation Archive (EVA) is a centralized database of European vegetation plots developed by the IAVS Working Group European Vegetation Survey. It has been in development since 2012 and first made available for use in research projects in 2014. It stores copies of national and regional...... data source for large-scale analyses of European vegetation diversity both for fundamental research and nature conservation applications. Updated information on EVA is available online at http://euroveg.org/eva-database....

  19. Resection methodology for PSP data processing: Recent ...

    Indian Academy of Sciences (India)

    M. Senthilkumar (Newgen Imaging) 1461 1996 Oct 15 13:05:22

    Abstract. PSP data processing, which primarily involves image alignment and image analysis, is a crucial element in obtaining accurate PSP results. There are two broad approaches to image alignment: the algebraic transformation technique, often called image-warping technique, and resection methodology, which uses ...

  20. A Conductive Gel for the Plotting of Equipotential Lines

    Science.gov (United States)

    Elizalde-Torres, J.; González-Cardel, M.; Vega-Murguía, E. J.; Castillo-González, I.; Rodríguez-Nava, M.

    2015-01-01

    This paper presents the development of a conductive gel that can be used to measure the electrical potential differences on its surface, and has enough consistency to plot equipotential lines. It has a gelation time of less than 10 min, and is suitable for implementing learning experiences in a physics teaching laboratory in a 90 min session. To…

  1. A new methodology involving stable isotope tracer to compare short- and long- term selenium mobility in soils

    Science.gov (United States)

    Tolu, Julie; Thiry, Yves; Potin-gautier, Martine; Le hécho, Isabelle; Bueno, Maïté

    2013-04-01

    Selenium is an element of environmental concern given its dual beneficial and toxic character to animal and human health. Its radioactive isotope 79Se, a fission product of 235U, is considered critical in safety assessment of nuclear waste repositories in case of leakage and hypothetical soil contamination. Therefore, Se species transformations and interactions with soil components have to be clearly understood to predict its dispersion in the biosphere (e.g., accumulation in soils, migration to waters, transfer to living organisms). While natural Se interactions with soils run over centuries to millennia time scales, transformations and partitioning are generally studied with short-term experiments (often inferior to 1 month) after Se addition. The influence of slower, long-term processes involved in Se speciation and mobility in soils is thus not properly accounted for. We tested if using ambient Se would be relevant for long-term risk assessment while added Se would be more representative of short-term contamination impact. For that purpose, we developed a new methodology to trace the differential reactivity of ambient and spiked Se at trace level (µg kg-1) in soils. It combined the use of a stable isotopically enriched tracer with our previous published analytical method based on specific extractions and HPLC-ICP-MS to determine trace Se species partition in different soil phases. Given that soil extracts contains very high concentrations of various elements interfering Se (e.g., Fe, Cl, Br), the ICP-MS parameters and mathematical corrections were optimized to cope with such interferences. Following optimization, three correct and accurate (<2%) isotope ratios were obtained with 77Se, 78Se, 80Se and 82Se. The optimized method was then applied to an arable and a forest soil submitted to an aging process (drying/wetting cycles) during three months, to which 77Se(IV) was previously added. The results showed that ambient Se was at steady state in terms of water

  2. ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases.

    Science.gov (United States)

    Shen, Li; Shao, Ningyi; Liu, Xiaochuan; Nestler, Eric

    2014-04-15

    Understanding the relationship between the millions of functional DNA elements and their protein regulators, and how they work in conjunction to manifest diverse phenotypes, is key to advancing our understanding of the mammalian genome. Next-generation sequencing technology is now used widely to probe these protein-DNA interactions and to profile gene expression at a genome-wide scale. As the cost of DNA sequencing continues to fall, the interpretation of the ever increasing amount of data generated represents a considerable challenge. We have developed ngs.plot - a standalone program to visualize enrichment patterns of DNA-interacting proteins at functionally important regions based on next-generation sequencing data. We demonstrate that ngs.plot is not only efficient but also scalable. We use a few examples to demonstrate that ngs.plot is easy to use and yet very powerful to generate figures that are publication ready. We conclude that ngs.plot is a useful tool to help fill the gap between massive datasets and genomic information in this era of big sequencing data.

  3. Plano amostral em parcelas de milho para avaliação de atributos de espigas Sampling plan in corn plots to evaluate ear characteristics

    Directory of Open Access Journals (Sweden)

    Thomas Newton Martin

    2005-12-01

    Full Text Available Em experimentos agrícolas, a amostragem é importante para reduzir os custos e a mão-de-obra, embora devam possuir características que confiram precisão experimental adequada. O objetivo do trabalho foi determinar uma metodologia para se amostrar parcelas e sub-parcelas experimentais de milho, quando o objetivo é avaliar atributos morfológicos e de rendimento avaliados nas espigas. O experimento foi realizado, no Departamento de Fitotecnia da Universidade Federal de Santa Maria, com quatro bases genéticas de milho (híbrido simples - DAS 9560; híbrido duplo - AG 303; híbrido triplo - AG 6018; variedade cultivada - BR 202. O delineamento usado foi blocos completos casualizados com quatro repetições. A parcela foi constituída de 96 sub-parcelas de um metro. Em cada parcela, amostraram-se as espigas de cinco sub-parcelas. Foram avaliados o comprimento, o diâmetro, o rendimento de grãos e a massa de cem grãos de cada espiga. Concluiu-se que o tamanho da amostra nas parcelas de milho está relacionado ao atributo a ser avaliado nas espigas. Existem interferências genéticas e ambientais sobre a magnitude da estimativa do tamanho da amostra de espigas de milho. Pode-se amostrar 24 espigas por parcela, em seis repetições por genótipo, para avaliar os atributos comprimento e largura de espigas, rendimento de grãos e massa de cem grãos, para obter uma semi-amplitude do intervalo de confiança abaixo de 10% da média.In agricultural experiments good sampling techniques are important to reduce costs and labor, and guarantee adequate experimental precision. The objective of this research was to study a sampling methodology of experimental plots to evaluate morphologic characteristic and corn yield in maize spikes. Single (DAS 9560, double (AG 6018 and triple (AG 303 crosses corn hybrids and an open pollinated variety (BR 202 were ev aluated. The experiment design was a randomized complete block with four replications and was conducted

  4. Computer Programs for Calculating and Plotting the Stability Characteristics of a Balloon Tethered in a Wind

    Science.gov (United States)

    Bennett, R. M.; Bland, S. R.; Redd, L. T.

    1973-01-01

    Computer programs for calculating the stability characteristics of a balloon tethered in a steady wind are presented. Equilibrium conditions, characteristic roots, and modal ratios are calculated for a range of discrete values of velocity for a fixed tether-line length. Separate programs are used: (1) to calculate longitudinal stability characteristics, (2) to calculate lateral stability characteristics, (3) to plot the characteristic roots versus velocity, (4) to plot the characteristic roots in root-locus form, (5) to plot the longitudinal modes of motion, and (6) to plot the lateral modes for motion. The basic equations, program listings, and the input and output data for sample cases are presented, with a brief discussion of the overall operation and limitations. The programs are based on a linearized, stability-derivative type of analysis, including balloon aerodynamics, apparent mass, buoyancy effects, and static forces which result from the tether line.

  5. Field Plot Techniques for Black Sigatoka Evaluation in East African Highland Bananas

    Directory of Open Access Journals (Sweden)

    Okoro, JU.

    1997-01-01

    Full Text Available Number of plants per experimental unit and number of replications for the efficient and precise assessment of black sigatoka leaf spot disease caused by Mycosphaerella fijiensis in East African Highland bananas were determined. Two representative cultivars were used. Host response to black sigatoka infection was measured by recording the youngest leaf with necrotic spots. The number of plants per experimental unit was determined, using the methods of maximum curvature and comparison of variances, while the number of replications was estimated by Hatheway's method. The optimum experimental plot size was 3 plants (18 m2 for the beer banana cultivar 'Igitsiri', and 30 plants (180 m2 for the cooking banana cultivar 'Igisahira Gisanzwe', using the comparison of variances method. However, the optimum plot size was 15 plants (90 m2 for both cultivars using the method of maximum curvature. The latter statistical method was preferred because of the low precision of the estimates in the former method. Unreplicated trials with plots of 15 plants could be adequate to assess black sigatoka response in East African bananas if uniform disease pressure exists.

  6. Action Between Plot and Discourse

    DEFF Research Database (Denmark)

    Grünbaum, Thor

    2007-01-01

    In this article, I argue that the representation of simple, bodily action has the function of endowing the narrative sequence with a visualizing power. It makes the narrated scenes or situations ready for visualization by the reader or listener. By virtue of this visualizing power or disposition...... an important visualizing function, these narrated actions have a communicative function and, as such, they can be said to belong to the domain of discourse-narratology. In the first part of the article, I argue that a certain type of plot-narratology, due to its retrospective epistemology and abstract...... definition of action, is unable to conceive of this visualizing function. In the second part, I argue that discourse-narratology fares no better since the visualizing function is independent of voice and focalization. In the final part, I sketch a possible account of the visualizing function of simple...

  7. A Metadata based Knowledge Discovery Methodology for Seeding Translational Research.

    Science.gov (United States)

    Kothari, Cartik R; Payne, Philip R O

    2015-01-01

    In this paper, we present a semantic, metadata based knowledge discovery methodology for identifying teams of researchers from diverse backgrounds who can collaborate on interdisciplinary research projects: projects in areas that have been identified as high-impact areas at The Ohio State University. This methodology involves the semantic annotation of keywords and the postulation of semantic metrics to improve the efficiency of the path exploration algorithm as well as to rank the results. Results indicate that our methodology can discover groups of experts from diverse areas who can collaborate on translational research projects.

  8. Origin of nonlinearities in the Bagley plots of thermotropic copolyesters

    NARCIS (Netherlands)

    Moldenaers, P.; Vermant, J.; Mewis, J.; Heynderickx, I.E.J.

    1996-01-01

    The origin of the nonlinearity observed in Bagley plots of thermotropic copolyesters has been investigated experimentally. With the aid of a two-piston slit rheometer the dependence of the viscosity on the hydrostatic pressure has been determined directly. This dependence only accounts for part of

  9. GRAFLAB 2.3 for UNIX - A MATLAB database, plotting, and analysis tool: User`s guide

    Energy Technology Data Exchange (ETDEWEB)

    Dunn, W.N.

    1998-03-01

    This report is a user`s manual for GRAFLAB, which is a new database, analysis, and plotting package that has been written entirely in the MATLAB programming language. GRAFLAB is currently used for data reduction, analysis, and archival. GRAFLAB was written to replace GRAFAID, which is a FORTRAN database, analysis, and plotting package that runs on VAX/VMS.

  10. SigmaPlot 2000, Version 6.00, SPSS Inc. Computer Software Test Plan

    Energy Technology Data Exchange (ETDEWEB)

    HURLBUT, S.T.

    2000-10-24

    SigmaPlot is a vendor software product used in conjunction with the supercritical fluid extraction Fourier transform infrared spectrometer (SFE-FTIR) system. This product converts the raw spectral data to useful area numbers. SigmaPlot will be used in conjunction with procedure ZA-565-301, ''Determination of Moisture by Supercritical Fluid Extraction and Infrared Detection.'' This test plan will be performed in conjunction with or prior to HNF-6936, ''HA-53 Supercritical Fluid Extraction System Acceptance Test Plan'', to perform analyses for water. The test will ensure that the software can be installed properly and will manipulate the analytical data correctly.

  11. Information extraction from FN plots of tungsten microemitters.

    Science.gov (United States)

    Mussa, Khalil O; Mousa, Marwan S; Fischer, Andreas

    2013-09-01

    Tungsten based microemitter tips have been prepared both clean and coated with dielectric materials. For clean tungsten tips, apex radii have been varied ranging from 25 to 500 nm. These tips were manufactured by electrochemical etching a 0.1 mm diameter high purity (99.95%) tungsten wire at the meniscus of two molar NaOH solution. Composite micro-emitters considered here are consisting of a tungsten core coated with different dielectric materials-such as magnesium oxide (MgO), sodium hydroxide (NaOH), tetracyanoethylene (TCNE), and zinc oxide (ZnO). It is worthwhile noting here, that the rather unconventional NaOH coating has shown several interesting properties. Various properties of these emitters were measured including current-voltage (IV) characteristics and the physical shape of the tips. A conventional field emission microscope (FEM) with a tip (cathode)-screen (anode) separation standardized at 10 mm was used to electrically characterize the electron emitters. The system was evacuated down to a base pressure of ∼10(-8) mbar when baked at up to ∼180 °C overnight. This allowed measurements of typical field electron emission (FE) characteristics, namely the IV characteristics and the emission images on a conductive phosphorus screen (the anode). Mechanical characterization has been performed through a FEI scanning electron microscope (SEM). Within this work, the mentioned experimental results are connected to the theory for analyzing Fowler-Nordheim (FN) plots. We compared and evaluated the data extracted from clean tungsten tips of different radii and determined deviations between the results of different extraction methods applied. In particular, we derived the apex radii of several clean and coated tungsten tips by both SEM imaging and analyzing FN plots. The aim of this analysis is to support the ongoing discussion on recently developed improvements of the theory for analyzing FN plots related to metal field electron emitters, which in particular

  12. qqman: an R package for visualizing GWAS results using Q-Q and manhattan plots

    OpenAIRE

    Turner, Stephen

    2014-01-01

    Summary: Genome-wide association studies (GWAS) have identified thousands of human trait-associated single nucleotide polymorphisms. Here, I describe a freely available R package for visualizing GWAS results using Q-Q and manhattan plots. The qqman package enables the flexible creation of manhattan plots, both genome-wide and for single chromosomes, with optional highlighting of SNPs of interest. Availability: qqman is released under the GNU General Public License, and is freely available on ...

  13. Visual evaluation of kinetic characteristics of PET probe for neuroreceptors using a two-phase graphic plot analysis.

    Science.gov (United States)

    Ito, Hiroshi; Ikoma, Yoko; Seki, Chie; Kimura, Yasuyuki; Kawaguchi, Hiroshi; Takuwa, Hiroyuki; Ichise, Masanori; Suhara, Tetsuya; Kanno, Iwao

    2017-05-01

    Objectives In PET studies for neuroreceptors, tracer kinetics are described by the two-tissue compartment model (2-TCM), and binding parameters, including the total distribution volume (V T ), non-displaceable distribution volume (V ND ), and binding potential (BP ND ), can be determined from model parameters estimated by kinetic analysis. The stability of binding parameter estimates depends on the kinetic characteristics of radioligands. To describe these kinetic characteristics, we previously developed a two-phase graphic plot analysis in which V ND and V T can be estimated from the x-intercept of regression lines for early and delayed phases, respectively. In this study, we applied this graphic plot analysis to visual evaluation of the kinetic characteristics of radioligands for neuroreceptors, and investigated a relationship between the shape of these graphic plots and the stability of binding parameters estimated by the kinetic analysis with 2-TCM in simulated brain tissue time-activity curves (TACs) with various binding parameters. Methods 90-min TACs were generated with the arterial input function and assumed kinetic parameters according to 2-TCM. Graphic plot analysis was applied to these simulated TACs, and the curvature of the plot for each TAC was evaluated visually. TACs with several noise levels were also generated with various kinetic parameters, and the bias and variation of binding parameters estimated by kinetic analysis were calculated in each TAC. These bias and variation were compared with the shape of graphic plots. Results The graphic plots showed larger curvature for TACs with higher specific binding and slower dissociation of specific binding. The quartile deviations of V ND and BP ND determined by kinetic analysis were smaller for radioligands with slow dissociation. Conclusions The larger curvature of graphic plots for radioligands with slow dissociation might indicate a stable determination of V ND and BP ND by kinetic analysis. For

  14. Design methodology of Dutch banknotes

    Science.gov (United States)

    de Heij, Hans A. M.

    2000-04-01

    Since the introduction of a design methodology for Dutch banknotes, the quality of Dutch paper currency has improved in more than one way. The methodology is question provides for (i) a design policy, which helps fix clear objectives; (ii) design management, to ensure a smooth cooperation between the graphic designer, printer, papermaker an central bank, (iii) a program of requirements, a banknote development guideline for all parties involved. This systematic approach enables an objective selection of design proposals, including security features. Furthermore, the project manager obtains regular feedback from the public by conducting market surveys. Each new design of a Netherlands Guilder banknote issued by the Nederlandsche Bank of the past 50 years has been an improvement on its predecessor in terms of value recognition, security and durability.

  15. Fisher.py: Fisher Matrix Manipulation and Confidence Contour Plotting

    Science.gov (United States)

    Coe, Dan

    2010-10-01

    Fisher.py allows you to combine constraints from multiple experiments (e.g., weak lensing + supernovae) and add priors (e.g., a flat universe) simply and easily. Calculate parameter uncertainties and plot confidence ellipses. Fisher matrix expectations for several experiments are included as calculated by myself (time delays) and the Dark Energy Task Force (WL/SN/BAO/CL/CMB), or provide your own.

  16. Evaluation of a Simple, Small-Plot Meteorological Technique for Measurement of Ammonia Emission: Feasibility, Costs, and Recommendations

    DEFF Research Database (Denmark)

    Pedersen, Simon Vilms; di Perta, Ester Scotto; Hafner, Sasha D.

    2018-01-01

    are regularly developed, and their efficacy needs to be tested using accurate methods. To date, a major obstacle to many available emission measurement techniques is the requirement of large plot sizes of homogeneous surface characteristics, which particularly is a challenge to the number of plot......-level replicates that can be carried out on a field providing uniform surface characteristics throughout. The objectives of this research were to test three different methods for measuring NH3 flux when applied to small plots (methods and to determine...... techniques, wind tunnels measuring gas-phase ammonia using ALPHA passive diffusion samplers and a flux chamber method using Dräger tubes for measurements of ammonia concentration (DTM) were used. As an inexpensive alternative small-plot method, we studied the feasibility of applying ALPHA passive diffusion...

  17. RL5SORT/RL5PLOT. A graphite package for the JRC-Ispra IBM version of RELAP5/MOD1

    International Nuclear Information System (INIS)

    Kolar, W.; Brewka, W.

    1984-01-01

    The present report describes the programs RL5SORT and RL5PLOT, their implementation and ''how to use''. Both programs base on the IBM version of RELAP5 as developed at JRC-ISPRA. RL5SORT creates from the output file (restart plot file) of a RELAP5 calculation data files, which serve as input data base for the program RL5PLOT. RL5PLOT retrieves the previous stored data records (minor edit quantities of RELAP5), allows arithmetic operations with the retrieved data and enables a print or graphic output on the terminal screen of a TEKTRONIX graphic terminal. A set of commands, incorporated in the program RL5PLOT, facilitates the user's work. Program RL5SORT has been developed as a batch program, while RL5PLOT has been conceived for interactive working mode

  18. Wash-off of Sr-90 and Cs-137 from two experimental plots. Model testing using Chernobyl data

    International Nuclear Information System (INIS)

    Konoplev, A.; Bulgakov, A.; Hoffman, O.; Thiessen, K.

    1996-09-01

    Surface water runoff from contaminated land is one of the major processes responsible for the contamination of water bodies. For example, the large area of land contaminated after the Chernobyl accident has become a continuing source of radionuclide contamination for natural waters and the aquatic ecosystem. Based on data from the Chernobyl accident, the 'Wash-off' scenario was developed to provide an opportunity to test models concerned with the movement of trace contaminants from terrestrial sources to water bodies. In particular, this scenario provides an opportunity for (1) evaluation of the movement of contaminants from soil to water, (2) calculation of the alteration and migration of contaminants in soil over different time scales, (3) increased understanding of contaminant transport at the process level, and (4) development and use of methods for estimation of key parameters. Modelers were provided with descriptions of two experimental plots near the Chernobyl NPP, one using simulated heavy rain (plot HR) and one using snow melt (plot SM). Initial information for plot HR included soil properties; hydrographs of rainfall and runoff dynamics; the time of application of rainfall; rainfall amounts, duration, and intensities; soil moisture content before the application of rainfall; regional data on average monthly precipitation and temperature; recorded information on naturally occurring precipitation between May and October 1986; and chemical forms of radionuclides in the soil of the plots prior to the experiments. Information for plot SM included the soil description and properties, snow storage in the snow melt period of 1988, chemical composition of the snow water, a hydrograph of the runoff dynamics, chemical radionuclide forms in the soil at the end of the experiment, and air and soil temperatures for the plot during the snow melt period. For each experimental plot, modelers were requested to estimate the vertical distribution of radionuclides (137 Cs and

  19. Development and application of a deterministic-realistic hybrid methodology for LOCA licensing analysis

    International Nuclear Information System (INIS)

    Liang, Thomas K.S.; Chou, Ling-Yao; Zhang, Zhongwei; Hsueh, Hsiang-Yu; Lee, Min

    2011-01-01

    Highlights: → A new LOCA licensing methodology (DRHM, deterministic-realistic hybrid methodology) was developed. → DRHM involves conservative Appendix K physical models and statistical treatment of plant status uncertainties. → DRHM can generate 50-100 K PCT margin as compared to a traditional Appendix K methodology. - Abstract: It is well recognized that a realistic LOCA analysis with uncertainty quantification can generate greater safety margin as compared with classical conservative LOCA analysis using Appendix K evaluation models. The associated margin can be more than 200 K. To quantify uncertainty in BELOCA analysis, generally there are two kinds of uncertainties required to be identified and quantified, which involve model uncertainties and plant status uncertainties. Particularly, it will take huge effort to systematically quantify individual model uncertainty of a best estimate LOCA code, such as RELAP5 and TRAC. Instead of applying a full ranged BELOCA methodology to cover both model and plant status uncertainties, a deterministic-realistic hybrid methodology (DRHM) was developed to support LOCA licensing analysis. Regarding the DRHM methodology, Appendix K deterministic evaluation models are adopted to ensure model conservatism, while CSAU methodology is applied to quantify the effect of plant status uncertainty on PCT calculation. Generally, DRHM methodology can generate about 80-100 K margin on PCT as compared to Appendix K bounding state LOCA analysis.

  20. Serum hepcidin-25 may replace the ferritin index in the Thomas plot in assessing iron status in anemic patients.

    Science.gov (United States)

    Thomas, C; Kobold, U; Balan, S; Roeddiger, R; Thomas, L

    2011-04-01

    Biochemical markers of iron deficiency do not distinguish iron-deficient anemia (IDA) from the anemia of chronic disease (ACD) and the combined state of ACD/IDA. Serum hepcidin-25 might be a marker resolving this problem. We investigated the extent to which serum hepcidin-25 enables the differentiation of the states above in comparison with the ferritin index plot, the so-called Thomas plot [soluble transferrin receptor (sTfR)/log ferritin and the reticulocyte hemoglobin content (CHr)]. Serum hepcidin-25 was determined in 155 anemic patients who were classified as having latent iron deficiency (latent ID), IDA, ACD, or ACD/IDA using the ferritin index plot (Thomas plot). Hepcidin-25 was determined using an isotope-dilution micro-HPLC-tandem mass spectrometry method. The ability to discriminate among these states based on serum hepcidin-25 alone or in combination with the CHr was evaluated in a receiver operating characteristic curve analysis and a comparison with the recently established ferritin index plot. Serum hepcidin-25 correlated with ferritin and the ferritin index. Use of a hepcidin-25 cutoff level of ≤4 nmol/l allowed the differentiation of IDA from ACD and ACD/IDA. Furthermore, the discrimination of ACD/IDA from ACD required combination with CHr in a new plot (hepcidin-25 and the CHr). The hepcidin-25 plot and the ferritin index plot showed a good correspondence in the differentiation of iron states in patients with anemia. Patients with IDA can be differentiated from ACD and ACD/IDA but not ACD from ACD/IDA based on hepcidin-25 alone. The combination of hepcidin-25 with CHr in the hepcidin-25 plot was useful for the differentiation of the states above. © 2010 Blackwell Publishing Ltd.

  1. TREDRA, Minimal Cut Sets Fault Tree Plot Program

    International Nuclear Information System (INIS)

    Fussell, J.B.

    1983-01-01

    1 - Description of problem or function: TREDRA is a computer program for drafting report-quality fault trees. The input to TREDRA is similar to input for standard computer programs that find minimal cut sets from fault trees. Output includes fault tree plots containing all standard fault tree logic and event symbols, gate and event labels, and an output description for each event in the fault tree. TREDRA contains the following features: a variety of program options that allow flexibility in the program output; capability for automatic pagination of the output fault tree, when necessary; input groups which allow labeling of gates, events, and their output descriptions; a symbol library which includes standard fault tree symbols plus several less frequently used symbols; user control of character size and overall plot size; and extensive input error checking and diagnostic oriented output. 2 - Method of solution: Fault trees are generated by user-supplied control parameters and a coded description of the fault tree structure consisting of the name of each gate, the gate type, the number of inputs to the gate, and the names of these inputs. 3 - Restrictions on the complexity of the problem: TREDRA can produce fault trees with a minimum of 3 and a maximum of 56 levels. The width of each level may range from 3 to 37. A total of 50 transfers is allowed during pagination

  2. On the thermalization achieved in the reactions involving superheavy nuclei

    Energy Technology Data Exchange (ETDEWEB)

    Bansal, Rajni [Department of Physics, MCM DAV College for Women, Sector 36A, Chandigarh-160036, India rajnibansal.pu@gmail.com (India)

    2016-05-06

    In the present study, we aim to explore the role of Coulomb potential on the thermalization achieved in the reactions involving superheavy nuclei. Particularly, we shall study the degree of the equilibrium attained in a reaction by the 3D density plots, anisotropy ratio as well as by the rapidity distribution of the nucleons. Our study reveals that the degree of the equilibrium attained in the central reactions of the superheavy nuclei remains unaffected by the Coulomb potential.

  3. Experimental Method for Plotting S-N Curve with a Small Number of Specimens

    Directory of Open Access Journals (Sweden)

    Strzelecki Przemysław

    2016-12-01

    Full Text Available The study presents two approaches to plotting an S-N curve based on the experimental results. The first approach is commonly used by researchers and presented in detail in many studies and standard documents. The model uses a linear regression whose parameters are estimated by using the least squares method. A staircase method is used for an unlimited fatigue life criterion. The second model combines the S-N curve defined as a straight line and the record of random occurrence of the fatigue limit. A maximum likelihood method is used to estimate the S-N curve parameters. Fatigue data for C45+C steel obtained in the torsional bending test were used to compare the estimated S-N curves. For pseudo-random numbers generated by using the Mersenne Twister algorithm, the estimated S-N curve for 10 experimental results plotted by using the second model, estimates the fatigue life in the scatter band of the factor 3. The result gives good approximation, especially regarding the time required to plot the S-N curve.

  4. Chromatographic properties PLOT multicapillary columns.

    Science.gov (United States)

    Nikolaeva, O A; Patrushev, Y V; Sidelnikov, V N

    2017-03-10

    Multicapillary columns (MCCs) for gas chromatography make it possible to perform high-speed analysis of the mixtures of gaseous and volatile substances at a relatively large amount of the loaded sample. The study was performed using PLOT MCCs for gas-solid chromatography (GSC) with different stationary phases (SP) based on alumina, silica and poly-(1-trimethylsilyl-1-propyne) (PTMSP) polymer as well as porous polymers divinylbenzene-styrene (DVB-St), divinylbenzene-vinylimidazole (DVB-VIm) and divinylbenzene-ethylene glycol dimethacrylate (DVB-EGD). These MCCs have the efficiency of 4000-10000 theoretical plates per meter (TP/m) and at a column length of 25-30cm can separate within 10-20s multicomponent mixtures of substances belonging to different classes of chemical compounds. The sample amount not overloading the column is 0.03-1μg and depends on the features of a porous layer. Examples of separations on some of the studied columns are considered. Copyright © 2017 Elsevier B.V. All rights reserved.

  5. Botany in children's literature: A content analysis of plant-centered children's picture books that have a plot and characters

    Science.gov (United States)

    Goins, Sheila Lewis

    graphics were cutaways, sequence diagrams, and zoom graphics. The findings relative to story plot and characters revealed that the majority of story plots involved a problem followed by a solution, rather than merely a series of events. The main character(s) of these stories were most often Caucasians (44%), followed by plants (28%), Hispanics (11%), animals personified (8%), African Americans (6%), and indigenous peoples (3%). Most often the stories took place in rural settings.

  6. Manual transportation within the plot and physical damages to bananas

    Directory of Open Access Journals (Sweden)

    Magalhães Mário Jorge Maia de

    2004-01-01

    Full Text Available The manual transportation of banana bunches within plots provokes physical damages to fruits compromising their quality. To assess the influence of the distance banana bunches travel on the shoulders of harvesters within the plot, on the incidence of physical damages present on the peel of fruits of the Nanicão cultivar, two experiments were carried out in the Vale do Ribeira region (SP, in sites with slope < 1%. Each experiment divided the plot in different distance bands, two of which were included in this study: one located far away from the collection roads (30-50 m and 80-100 m distance bands and another in an intermediate position (70-80 m and 130-150 m distance bands. For each distance band, six banana bunches of 36 mm gauged fruits were randomly sampled. Four banana hands were cut from the middle region of each bunch and ten fruits were assessed per hand, totaling 240 fruits per treatment. Bunches were harvested at the same maturity degree and those served as control were not transported. A total of 1440 fruits was assessed in the two experiments. The physical damages on the fruit surface were graded on a scale with 6 divisions: 0-0.25 cm²; 0.25-0.5 cm²; 0.5-1.0 cm²; 1.0-1.5 cm²; 1.5-2.0 cm²; 2.0-2.5 cm². The bunches transported on the shoulders of harvesters on distances over 70 m suffered increased (P < 0.01 damaged area. Most damages presented areas up to 0.5 cm².

  7. Correlation analysis of respiratory signals by using parallel coordinate plots.

    Science.gov (United States)

    Saatci, Esra

    2018-01-01

    The understanding of the bonds and the relationships between the respiratory signals, i.e. the airflow, the mouth pressure, the relative temperature and the relative humidity during breathing may provide the improvement on the measurement methods of respiratory mechanics and sensor designs or the exploration of the several possible applications in the analysis of respiratory disorders. Therefore, the main objective of this study was to propose a new combination of methods in order to determine the relationship between respiratory signals as a multidimensional data. In order to reveal the coupling between the processes two very different methods were used: the well-known statistical correlation analysis (i.e. Pearson's correlation and cross-correlation coefficient) and parallel coordinate plots (PCPs). Curve bundling with the number intersections for the correlation analysis, Least Mean Square Time Delay Estimator (LMS-TDE) for the point delay detection and visual metrics for the recognition of the visual structures were proposed and utilized in PCP. The number of intersections was increased when the correlation coefficient changed from high positive to high negative correlation between the respiratory signals, especially if whole breath was processed. LMS-TDE coefficients plotted in PCP indicated well-matched point delay results to the findings in the correlation analysis. Visual inspection of PCB by visual metrics showed range, dispersions, entropy comparisons and linear and sinusoidal-like relationships between the respiratory signals. It is demonstrated that the basic correlation analysis together with the parallel coordinate plots perceptually motivates the visual metrics in the display and thus can be considered as an aid to the user analysis by providing meaningful views of the data. Copyright © 2017 Elsevier B.V. All rights reserved.

  8. Scaling wood volume estimates from inventory plots to landscapes with airborne LiDAR in temperate deciduous forest

    Directory of Open Access Journals (Sweden)

    Shaun R. Levick

    2016-05-01

    Full Text Available Abstract Background Monitoring and managing carbon stocks in forested ecosystems requires accurate and repeatable quantification of the spatial distribution of wood volume at landscape to regional scales. Grid-based forest inventory networks have provided valuable records of forest structure and dynamics at individual plot scales, but in isolation they may not represent the carbon dynamics of heterogeneous landscapes encompassing diverse land-management strategies and site conditions. Airborne LiDAR has greatly enhanced forest structural characterisation and, in conjunction with field-based inventories, it provides avenues for monitoring carbon over broader spatial scales. Here we aim to enhance the integration of airborne LiDAR surveying with field-based inventories by exploring the effect of inventory plot size and number on the relationship between field-estimated and LiDAR-predicted wood volume in deciduous broad-leafed forest in central Germany. Results Estimation of wood volume from airborne LiDAR was most robust (R2 = 0.92, RMSE = 50.57 m3 ha−1 ~14.13 Mg C ha−1 when trained and tested with 1 ha experimental plot data (n = 50. Predictions based on a more extensive (n = 1100 plot network with considerably smaller (0.05 ha plots were inferior (R2 = 0.68, RMSE = 101.01 ~28.09 Mg C ha−1. Differences between the 1 and 0.05 ha volume models from LiDAR were negligible however at the scale of individual land-management units. Sample size permutation tests showed that increasing the number of inventory plots above 350 for the 0.05 ha plots returned no improvement in R2 and RMSE variability of the LiDAR-predicted wood volume model. Conclusions Our results from this study confirm the utility of LiDAR for estimating wood volume in deciduous broad-leafed forest, but highlight the challenges associated with field plot size and number in establishing robust relationships between airborne LiDAR and field derived wood volume. We

  9. Scaling wood volume estimates from inventory plots to landscapes with airborne LiDAR in temperate deciduous forest.

    Science.gov (United States)

    Levick, Shaun R; Hessenmöller, Dominik; Schulze, E-Detlef

    2016-12-01

    Monitoring and managing carbon stocks in forested ecosystems requires accurate and repeatable quantification of the spatial distribution of wood volume at landscape to regional scales. Grid-based forest inventory networks have provided valuable records of forest structure and dynamics at individual plot scales, but in isolation they may not represent the carbon dynamics of heterogeneous landscapes encompassing diverse land-management strategies and site conditions. Airborne LiDAR has greatly enhanced forest structural characterisation and, in conjunction with field-based inventories, it provides avenues for monitoring carbon over broader spatial scales. Here we aim to enhance the integration of airborne LiDAR surveying with field-based inventories by exploring the effect of inventory plot size and number on the relationship between field-estimated and LiDAR-predicted wood volume in deciduous broad-leafed forest in central Germany. Estimation of wood volume from airborne LiDAR was most robust (R 2  = 0.92, RMSE = 50.57 m 3 ha -1  ~14.13 Mg C ha -1 ) when trained and tested with 1 ha experimental plot data (n = 50). Predictions based on a more extensive (n = 1100) plot network with considerably smaller (0.05 ha) plots were inferior (R 2  = 0.68, RMSE = 101.01 ~28.09 Mg C ha -1 ). Differences between the 1 and 0.05 ha volume models from LiDAR were negligible however at the scale of individual land-management units. Sample size permutation tests showed that increasing the number of inventory plots above 350 for the 0.05 ha plots returned no improvement in R 2 and RMSE variability of the LiDAR-predicted wood volume model. Our results from this study confirm the utility of LiDAR for estimating wood volume in deciduous broad-leafed forest, but highlight the challenges associated with field plot size and number in establishing robust relationships between airborne LiDAR and field derived wood volume. We are moving into a forest management era where

  10. Sensitivity of temporal heart rate variability in Poincaré plot to changes in parasympathetic nervous system activity.

    Science.gov (United States)

    Karmakar, Chandan K; Khandoker, Ahsan H; Voss, Andreas; Palaniswami, Marimuthu

    2011-03-03

    A novel descriptor (Complex Correlation Measure (CCM)) for measuring the variability in the temporal structure of Poincaré plot has been developed to characterize or distinguish between Poincaré plots with similar shapes. This study was designed to assess the changes in temporal structure of the Poincaré plot using CCM during atropine infusion, 70° head-up tilt and scopolamine administration in healthy human subjects. CCM quantifies the point-to-point variation of the signal rather than gross description of the Poincaré plot. The physiological relevance of CCM was demonstrated by comparing the changes in CCM values with autonomic perturbation during all phases of the experiment. The sensitivities of short term variability (SD1), long term variability (SD2) and variability in temporal structure (CCM) were analyzed by changing the temporal structure by shuffling the sequences of points of the Poincaré plot. Surrogate analysis was used to show CCM as a measure of changes in temporal structure rather than random noise and sensitivity of CCM with changes in parasympathetic activity. CCM was found to be most sensitive to changes in temporal structure of the Poincaré plot as compared to SD1 and SD2. The values of all descriptors decreased with decrease in parasympathetic activity during atropine infusion and 70° head-up tilt phase. In contrast, values of all descriptors increased with increase in parasympathetic activity during scopolamine administration. The concordant reduction and enhancement in CCM values with parasympathetic activity indicates that the temporal variability of Poincaré plot is modulated by the parasympathetic activity which correlates with changes in CCM values. CCM is more sensitive than SD1 and SD2 to changes of parasympathetic activity.

  11. Multi-reader ROC studies with split-plot designs: a comparison of statistical methods.

    Science.gov (United States)

    Obuchowski, Nancy A; Gallas, Brandon D; Hillis, Stephen L

    2012-12-01

    Multireader imaging trials often use a factorial design, in which study patients undergo testing with all imaging modalities and readers interpret the results of all tests for all patients. A drawback of this design is the large number of interpretations required of each reader. Split-plot designs have been proposed as an alternative, in which one or a subset of readers interprets all images of a sample of patients, while other readers interpret the images of other samples of patients. In this paper, the authors compare three methods of analysis for the split-plot design. Three statistical methods are presented: the Obuchowski-Rockette method modified for the split-plot design, a newly proposed marginal-mean analysis-of-variance approach, and an extension of the three-sample U-statistic method. A simulation study using the Roe-Metz model was performed to compare the type I error rate, power, and confidence interval coverage of the three test statistics. The type I error rates for all three methods are close to the nominal level but tend to be slightly conservative. The statistical power is nearly identical for the three methods. The coverage of 95% confidence intervals falls close to the nominal coverage for small and large sample sizes. The split-plot multireader, multicase study design can be statistically efficient compared to the factorial design, reducing the number of interpretations required per reader. Three methods of analysis, shown to have nominal type I error rates, similar power, and nominal confidence interval coverage, are available for this study design. Copyright © 2012 AUR. All rights reserved.

  12. Assessment of errors associated with plot size and lateral movement of nitrogen-15 when studying fertilizer recovery under field conditions

    International Nuclear Information System (INIS)

    Sanchez, C.A.; Blackmer, A.M.; Horton, R.; Timmons, D.R.

    1987-01-01

    The high cost of 15 N-labeled fertilizers encourages the use of field plots having minimum size. If plot size is reduced too much, however, lateral movement of N near the plots by mass flow or diffusion within the soil or by translocation through plant roots can become a significant source of error in determinations of fertilizer N recovery. This study was initiated to assess the importance of lateral movement of labeled fertilizer when unconfined plots are used to determine recovery of fertilizer. Corn grain samples were collected at various positions inside and outside 15 N plots, and the 15 N contents of these samples were determined. The data were fit to mathematical models to estimate the extent to which lateral movement of fertilizer N caused errors in determined values of fertilizer recovery for the first, second, and third crops following fertilization. These models also were used to predict the plot size needed for similar 15 N-tracer studies in the future. The results of these studies indicate that 15 N plots having a size of 2 by 2 m are sufficiently large for determining recovery of fertilizer N for corn crops under most conditions. Where lateral movement of fertilizer N in soils is suspected to be a problem, we recommend collection of a few plant samples outside the 15 N plots as insurance against misleading conclusions concerning fertilizer N recovery

  13. Process Waste Assessment for the Plotting and Digitizing Support Laboratory

    International Nuclear Information System (INIS)

    Phillips, N.M.

    1994-04-01

    This Process Waste Assessment was conducted to evaluate the Plotting and Digitizing Support Laboratory, located in Building 913, Room 157. It documents the processes, identifies the hazardous chemical waste streams generated by these processes, recommends possible ways to minimize waste, and serves as a reference for future assessments of this facility

  14. Crown condition assessment at the CONECOFOR Permanent Monitoring Plots

    Directory of Open Access Journals (Sweden)

    Renzo NIBBI

    2002-09-01

    Full Text Available A detailed crown condition assessment is currently being carried out at the CONECOFOR (CONtrollo ECOsistemi FORestali, Control of Forest Ecosystems plots. The assessment began in 1996, and during the first two years (1996 and 1997 an assessment form based on previous regional experience was used; in 1998 the new official EU form was adopted. The resulting loss of comparability means that only a few indices can be used in the temporal series 1996-1999. Much effort was devoted to Quality Assurance (QA procedures. The QA program is structured as follows: (i specific field manuals have been adopted and are continuously updated; (ii a national training and intercalibration course (NT&IC is undertaken yearly before beginning the assessment campaign;( iii field checks are carried out yearly on a large number of plots. The results of the QA program have shown that for several indices the quality objectives were not reached, but the quality of the data is improving with time. To express the change in crown conditions in each area, a complex index (CCI = Crown Condition Index was adopted. This index is the result of the sum of the relativized values of all the common indices used during the four years. The following parameters were used: transparency, ramification type, leaf colour alteration extension, leaf damage extension, alteration of leaf distension extension. The range within which the CCI fluctuates was evaluated taking into account all the observations carried out at a given plot throughout the years. The number of cases over a given threshold (outliers was calculated for each year. The threshold for outliers was calculated as the median value plus 2 times the range of the interquartile value. All individual cases exceeding this value are considered outliers. The results are presented for all the areas in which the data set is complete for the four years. The yearly fluctuations are discussed and related to possible causes.

  15. Allan Deviation Plot as a Tool for Quartz-Enhanced Photoacoustic Sensors Noise Analysis.

    Science.gov (United States)

    Giglio, Marilena; Patimisco, Pietro; Sampaolo, Angelo; Scamarcio, Gaetano; Tittel, Frank K; Spagnolo, Vincenzo

    2016-04-01

    We report here on the use of the Allan deviation plot to analyze the long-term stability of a quartz-enhanced photoacoustic (QEPAS) gas sensor. The Allan plot provides information about the optimum averaging time for the QEPAS signal and allows the prediction of its ultimate detection limit. The Allan deviation can also be used to determine the main sources of noise coming from the individual components of the sensor. Quartz tuning fork thermal noise dominates for integration times up to 275 s, whereas at longer averaging times, the main contribution to the sensor noise originates from laser power instabilities.

  16. Dispersion-theoretical analysis of the D"+→K"−π"+π"+ Dalitz plot

    International Nuclear Information System (INIS)

    Niecknig, Franz; Kubis, Bastian

    2015-01-01

    We study the Dalitz plot of the Cabibbo-favored charmed-meson decay D"+→K"−π"+π"+ using dispersion theory. The formalism respects all constraints from analyticity and unitarity, and consistently describes final-state interactions between all three decay products. We employ pion-pion and pion-kaon phase shifts as input, and fit the pertinent subtraction constants to Dalitz plot data by the CLEO and FOCUS collaborations. Phase motions of resonant as well as nonresonant amplitudes are discussed, which should provide crucial input for future studies of CP violation in similar three-body charm decays.

  17. On the generating function of Poincare plots defining one dimensional perturbed Hamiltonian systems

    International Nuclear Information System (INIS)

    Montvai, A.

    1989-01-01

    A simple numerical method has been devised, for deriving the generating function of an arbitrary, one dimensional Hamiltonian system represented by its Poincare plot. In this case, the plot to be numerically processed is an area preserving transformation of a two-dimensional surface onto itself. Although the method in its present form is capable of treating only this case, there are no principal restrictions excluding the analysis of systems with higher dimensionality as well. As an example, the generating function of the motion of alpha particles in a nonsymmetric, toroidal magnetic field is derived and studied numerically. (orig.)

  18. Color palette: Plotting guide for use with GSMAP and GSDRAW digital cartographic software

    International Nuclear Information System (INIS)

    Schilling, S.P.; Thompson, R.A.

    1989-01-01

    Guidelines for plotting a variety of colors and patterns using GSMAP and GSDRAW digital cartographic programs have been developed. These color and pattern variations can be used to fill polygons (areas) on maps, charts, or diagrams. Batch processing file for plotting a sample color/pattern palette on a Hewlett Packard 7585B 8-pen plotter using GSDRAW software are provided on the disk. The detailed instructions, batch processing files, and variables used to construct the palette will provide the user ready access to 99 fill patterns, and aid in designing other useful combinations. 2 refs., 2 figs

  19. QMESH RENUM QPLOT, Mesh Generator on 2-D Bodies for Finite Element Method Analysis, with Plot Utility

    International Nuclear Information System (INIS)

    Jones, R.E.; Schkade, A.F.; Eyberger, L.R.

    1991-01-01

    1 - Description of problem or function: A set of five programs which make up a self-organising mesh generation package. QMESH generates meshes having quadrilateral elements on arbitrarily-shaped, two-dimensional (planar or axisymmetric) bodies. It is designed for use with two-dimensional finite element analysis applications. A flexible hierarchical input scheme is used to describe bodies to QMESH as collections of regions. A mesh for each region is developed independently, with the final assembly and bandwidth minimization performed by the independent program, RENUM or RENUM8. RENUM is applied when four-node elements are desired. Eight-node elements (with mid-side nodes) may be obtained with RENUM8., QPLOT and QPLOT8 are plot programs for meshes generated by the QMESH/RENUM and QMESH/RENUM8 program pairs, respectively. QPLOT and QPLOT8 automatically section the mesh into appropriately-sized sections for legible display of node and element numbers. An overall plot showing the position of the selected plot areas is produced. 2 - Method of solution: The mesh generating process for each individual region begins with the installation of an initial mesh which is a transformation of a regular grid on the unit square. The dimensions and orientation of the initial mesh may be defined by the user or, optionally, may be chosen by QMESH. Various smoothing algorithms may be applied to the initial mesh. Then, the mesh may be 'restructured' using an iterative scheme involving 'element pair restructuring', 'acute element deletion', and smoothing. In element pair restructuring, the interface side between two elements is removed and placed between two different nodes belonging to the pair of elements, provided that the change produces an overall improvement in the shapes of the two elements. In acute element deletion, an element having one diagonal much shorter than the other is deleted by collapsing the short diagonal to zero length The exact order in which restructuring, element

  20. Forest Plots in Excel: Moving beyond a Clump of Trees to a Forest of Visual Information

    Science.gov (United States)

    Derzon, James H.; Alford, Aaron A.

    2013-01-01

    Forest plots provide an effective means of presenting a wealth of information in a single graphic. Whether used to illustrate multiple results in a single study or the cumulative knowledge of an entire field, forest plots have become an accepted and generally understood way of presenting many estimates simultaneously. This article explores…

  1. Systems selection methodology for civil nuclear power applications

    International Nuclear Information System (INIS)

    Scarborough, J.

    1988-01-01

    A methodology for evaluation and selection of a preferred Advanced Small or Medium Power Reactor (SMPR) for commercial electric power generation is discussed, and an illustrative example is presented with five US Advanced SMPR power plants. The evaluation procedure was developed from a methodology for ranking small, advanced nuclear power plant designs under development by the US Department of Energy (DOE) and Department of Defense (DOD). The methodology involves establishing numerical probability distributions for each of fifteen evaluation criteria for each Advanced SMPR plant. A resultant single probability distribution with its associated numerical mean value is then developed for each Advanced SMPR plant by Monte Carlo sampling techniques in order that each plant may be ranked with an associated statement of certainty. The selection methodology is intended as a screening procedure for commercial offerings to preclude detailed technical and commercial assessments from being conducted for those offerings which do not meet the initial screening criteria

  2. Systems selection methodology for civil nuclear power applications

    International Nuclear Information System (INIS)

    Scarborough, J.C.

    1987-01-01

    A methodology for evaluation and selection of a preferred Advanced Small or Medium Power Reactor (SMPR) for commercial electric power generation is discussed, and an illustrative example is presented with five U.S. Advanced SMPR power plants. The evaluation procedure was developed from a methodology for ranking small. advenced nuclear power plant designs under development by the U.S. Department of Energy (DOE) and Department of Defense (DOD). The methodology involves establishing numerical probability distributions for each of fifteen evaluation criteria for each Advanced SMPR plant. A resultant single probability distribution with its associated numerical mean value is then developed for each Advanced SMPR plant by Monte Carlo sampling techniques in order that each plant may be ranked with an associated statement of certainty. The selection methodology is intended as a screening procedure for commercial offerings to preclude detailed technical and commercial assessments from being conducted for those offerings which do not meet the initial screening criteria. (auhtor)

  3. Students' Involvement in Continuous Assessment Methodologies: A Case Study for a Distributed Information Systems Course

    Science.gov (United States)

    Cano, M.-D.

    2011-01-01

    The creation of the new European Higher Education Area (EHEA), with the corresponding changes in the structure and content of university degrees, offers a great opportunity to review learning methodologies. This paper investigates the effect on students of moving from a traditional learning process, based on lectures and laboratory work, to an…

  4. Multi-objective decisions in land-use planning involving chemical sites

    DEFF Research Database (Denmark)

    Rasmussen, B.; Bertelsen, I.; Burchard, V.

    1999-01-01

    A methodology for land-use planning involving chemical sites has been developed for making decisions in local and regional administrations. The methodology structures the planning process in seven steps, where one can loop through the steps several times.Essential parts of the methodology...... are the specification of objectives and the development of alternatives where the objectives sets the frame in which the alternatives are assessed and compared. The list of objectives includes the following items: safetyand accidents, public distortion and health, environmental impact, cultural and natural heritage...

  5. APPLE-2: an improved version of APPLE code for plotting neutron and gamma ray spectra and reaction rates

    International Nuclear Information System (INIS)

    Kawasaki, Hiromitsu; Seki, Yasushi.

    1982-07-01

    A computer code APPLE-2 which plots the spatial distribution of energy spectra of multi-group neutron and/or gamma ray fluxes, and reaction rates has been developed. This code is an improved version of the previously developed APPLE code and has the following features: (1) It plots energy spectra of neutron and/or gamma ray fluxes calculated by ANISN, DOT and MORSE. (2) It calculates and plots the spatial distribution of neutron and gamma ray fluxes and various types of reaction rates such as nuclear heating rates, operational dose rates, displacement damage rates. (3) Input data specification is greatly simplified by the use of standard, response libraries and by close coupling with radiation transport calculation codes. (4) Plotting outputs are given in camera ready form. (author)

  6. A methodology for the optimization of the estimation of tritium in urine by liquid scintillation counting

    International Nuclear Information System (INIS)

    Joseph, S.; Kramer, G.H.

    1982-10-01

    A method has been designed to optimize liquid scintillation (LS) urinalysis with respect to sensitivity and cost. Three related factors, quench, sample composition and counting efficiency, were measured simultaneously and the results plotted in three dimensions to determine the optimum conditions for urinalysis. Picric acid was used to simulate quenching. Subsequent urinalysis experiments showed that quenching by picric acid was analogous to urine quenching. The optimization methodology was applied to ten commercial LS cocktails and a wide divergence in results was obtained. This method can also be used to optimize minimum detectable activities (MDA) but the results show that there is no fixed sample composition that can be used for all the various types of urine samples; however, it is possible to achieve general improvements of at least a factor of 2 in the MDA for Scintiverse (the only one tested for this particular application of the methodology)

  7. Stakeholder analysis methodologies resource book

    Energy Technology Data Exchange (ETDEWEB)

    Babiuch, W.M.; Farhar, B.C.

    1994-03-01

    Stakeholder analysis allows analysts to identify how parties might be affected by government projects. This process involves identifying the likely impacts of a proposed action and stakeholder groups affected by that action. Additionally, the process involves assessing how these groups might be affected and suggesting measures to mitigate any adverse effects. Evidence suggests that the efficiency and effectiveness of government actions can be increased and adverse social impacts mitigated when officials understand how a proposed action might affect stakeholders. This report discusses how to conduct useful stakeholder analyses for government officials making decisions on energy-efficiency and renewable-energy technologies and their commercialization. It discusses methodological issues that may affect the validity and reliability of findings, including sampling, generalizability, validity, ``uncooperative`` stakeholder groups, using social indicators, and the effect of government regulations. The Appendix contains resource directories and a list of specialists in stakeholder analysis and involvement.

  8. A further use for the Harvest plot: a novel method for the presentation of data synthesis.

    Science.gov (United States)

    Crowther, Mark; Avenell, Alison; MacLennan, Graeme; Mowatt, Graham

    2011-06-01

    When performing a systematic review, whether or not a meta-analysis is performed, graphical displays can be useful. Data do still need to be described, ideally in graphical form. The Harvest plot has been developed to display combined data from several studies that allows demonstration of not only effect but also study quality. We describe a modification to the Harvest plot that allows the presentation of data that normally could not be included in a forest plot meta-analysis and allows extra information to be displayed. Using specific examples, we describe how the arrangement of studies, height of the bars and additional information can be used to enhance the plot. This is an important development, which by fulfilling Tufte's nine requirements for graphical presentation, allows researchers to display evidence in a flexible way. This means readers can follow an argument in a clear and efficient manner without the need for large volumes of descriptive text. Copyright © 2011 John Wiley & Sons, Ltd. Copyright © 2011 John Wiley & Sons, Ltd.

  9. A prioritization methodology to strategic planning process

    International Nuclear Information System (INIS)

    Rondinelli Junior, Francisco; Cherif, Hadj Slimane

    2009-01-01

    In the process of formulation of a Strategic Plan, there is always a step that deals with choices among different options and strategies. To do that a prioritization methodology has to be applied in order to achieve the higher needs identified along the analysis and evaluation of problems. To assign priorities within a set of needs/problems of a strategic nature and identified within various areas of activity or different sectors, it is proposed a methodology that envisage the use of specific attributes for which a graded scale of values is established for each need/problem, which, at the end of the process, allows a quantitative comparison among them. The methodology presented in this paper was developed following an approach that has been used in many areas over the last 20 years by various public and private institutions, and also by international organizations involved in promotion and development work. (author)

  10. Some Findings Concerning Requirements in Agile Methodologies

    Science.gov (United States)

    Rodríguez, Pilar; Yagüe, Agustín; Alarcón, Pedro P.; Garbajosa, Juan

    Agile methods have appeared as an attractive alternative to conventional methodologies. These methods try to reduce the time to market and, indirectly, the cost of the product through flexible development and deep customer involvement. The processes related to requirements have been extensively studied in literature, in most cases in the frame of conventional methods. However, conclusions of conventional methodologies could not be necessarily valid for Agile; in some issues, conventional and Agile processes are radically different. As recent surveys report, inadequate project requirements is one of the most conflictive issues in agile approaches and better understanding about this is needed. This paper describes some findings concerning requirements activities in a project developed under an agile methodology. The project intended to evolve an existing product and, therefore, some background information was available. The major difficulties encountered were related to non-functional needs and management of requirements dependencies.

  11. SigmaPlot 2000, Version 6.00, SPSS Inc. Computer Software Project Management, Requirements, and Design Document

    Energy Technology Data Exchange (ETDEWEB)

    HURLBUT, S.T.

    2000-10-24

    SigmaPlot is a vendor software product that will be used to convert the area under an absorbance curve generated by a Fourier transform infrared spectrometer (FTIR) to a relative area. SigmaPlot will be used in conjunction with procedure ZA-565-301, ''Determination of Moisture by Supercritical Fluid Extraction and Infrared Detection.''

  12. Plant species richness enhances nitrogen retention in green roof plots.

    Science.gov (United States)

    Johnson, Catherine; Schweinhart, Shelbye; Buffam, Ishi

    2016-10-01

    Vegetated (green) roofs have become common in many cities and are projected to continue to increase in coverage, but little is known about the ecological properties of these engineered ecosystems. In this study, we tested the biodiversity-ecosystem function hypothesis using commercially available green roof trays as replicated plots with varying levels of plant species richness (0, 1, 3, or 6 common green roof species per plot, using plants with different functional characteristics). We estimated accumulated plant biomass near the peak of the first full growing season (July 2013) and measured runoff volume after nearly every rain event from September 2012 to September 2013 (33 events) and runoff fluxes of inorganic nutrients ammonium, nitrate, and phosphate from a subset of 10 events. We found that (1) total plant biomass increased with increasing species richness, (2) green roof plots were effective at reducing storm runoff, with vegetation increasing water retention more than soil-like substrate alone, but there was no significant effect of plant species identity or richness on runoff volume, (3) green roof substrate was a significant source of phosphate, regardless of presence/absence of plants, and (4) dissolved inorganic nitrogen (DIN = nitrate + ammonium) runoff fluxes were different among plant species and decreased significantly with increasing plant species richness. The variation in N retention was positively related to variation in plant biomass. Notably, the increased biomass and N retention with species richness in this engineered ecosystem are similar to patterns observed in published studies from grasslands and other well-studied ecosystems. We suggest that more diverse plantings on vegetated roofs may enhance the retention capacity for reactive nitrogen. This is of importance for the sustained health of vegetated roof ecosystems, which over time often experience nitrogen limitation, and is also relevant for water quality in receiving waters

  13. Information extraction from FN plots of tungsten microemitters

    Energy Technology Data Exchange (ETDEWEB)

    Mussa, Khalil O. [Department of Physics, Mu' tah University, Al-Karak (Jordan); Mousa, Marwan S., E-mail: mmousa@mutah.edu.jo [Department of Physics, Mu' tah University, Al-Karak (Jordan); Fischer, Andreas, E-mail: andreas.fischer@physik.tu-chemnitz.de [Institut für Physik, Technische Universität Chemnitz, Chemnitz (Germany)

    2013-09-15

    Tungsten based microemitter tips have been prepared both clean and coated with dielectric materials. For clean tungsten tips, apex radii have been varied ranging from 25 to 500 nm. These tips were manufactured by electrochemical etching a 0.1 mm diameter high purity (99.95%) tungsten wire at the meniscus of two molar NaOH solution. Composite micro-emitters considered here are consisting of a tungsten core coated with different dielectric materials—such as magnesium oxide (MgO), sodium hydroxide (NaOH), tetracyanoethylene (TCNE), and zinc oxide (ZnO). It is worthwhile noting here, that the rather unconventional NaOH coating has shown several interesting properties. Various properties of these emitters were measured including current–voltage (IV) characteristics and the physical shape of the tips. A conventional field emission microscope (FEM) with a tip (cathode)–screen (anode) separation standardized at 10 mm was used to electrically characterize the electron emitters. The system was evacuated down to a base pressure of ∼10{sup −8}mbar when baked at up to ∼180°C overnight. This allowed measurements of typical field electron emission (FE) characteristics, namely the IV characteristics and the emission images on a conductive phosphorus screen (the anode). Mechanical characterization has been performed through a FEI scanning electron microscope (SEM). Within this work, the mentioned experimental results are connected to the theory for analyzing Fowler–Nordheim (FN) plots. We compared and evaluated the data extracted from clean tungsten tips of different radii and determined deviations between the results of different extraction methods applied. In particular, we derived the apex radii of several clean and coated tungsten tips by both SEM imaging and analyzing FN plots. The aim of this analysis is to support the ongoing discussion on recently developed improvements of the theory for analyzing FN plots related to metal field electron emitters, which in

  14. Information extraction from FN plots of tungsten microemitters

    International Nuclear Information System (INIS)

    Mussa, Khalil O.; Mousa, Marwan S.; Fischer, Andreas

    2013-01-01

    Tungsten based microemitter tips have been prepared both clean and coated with dielectric materials. For clean tungsten tips, apex radii have been varied ranging from 25 to 500 nm. These tips were manufactured by electrochemical etching a 0.1 mm diameter high purity (99.95%) tungsten wire at the meniscus of two molar NaOH solution. Composite micro-emitters considered here are consisting of a tungsten core coated with different dielectric materials—such as magnesium oxide (MgO), sodium hydroxide (NaOH), tetracyanoethylene (TCNE), and zinc oxide (ZnO). It is worthwhile noting here, that the rather unconventional NaOH coating has shown several interesting properties. Various properties of these emitters were measured including current–voltage (IV) characteristics and the physical shape of the tips. A conventional field emission microscope (FEM) with a tip (cathode)–screen (anode) separation standardized at 10 mm was used to electrically characterize the electron emitters. The system was evacuated down to a base pressure of ∼10 −8 mbar when baked at up to ∼180°C overnight. This allowed measurements of typical field electron emission (FE) characteristics, namely the IV characteristics and the emission images on a conductive phosphorus screen (the anode). Mechanical characterization has been performed through a FEI scanning electron microscope (SEM). Within this work, the mentioned experimental results are connected to the theory for analyzing Fowler–Nordheim (FN) plots. We compared and evaluated the data extracted from clean tungsten tips of different radii and determined deviations between the results of different extraction methods applied. In particular, we derived the apex radii of several clean and coated tungsten tips by both SEM imaging and analyzing FN plots. The aim of this analysis is to support the ongoing discussion on recently developed improvements of the theory for analyzing FN plots related to metal field electron emitters, which in

  15. A randomized comparison between league tables and funnel plots to inform health care decision-making.

    Science.gov (United States)

    Anell, Anders; Hagberg, Oskar; Liedberg, Fredrik; Ryden, Stefan

    2016-12-01

    Comparison of provider performance is commonly used to inform health care decision-making. Little attention has been paid to how data presentations influence decisions. This study analyzes differences in suggested actions by decision-makers informed by league tables or funnel plots. Decision-makers were invited to a survey and randomized to compare hospital performance using either league tables or funnel plots for four different measures within the area of cancer care. For each measure, decision-makers were asked to suggest actions towards 12-16 hospitals (no action, ask for more information, intervene) and provide feedback related to whether the information provided had been useful. Swedish health care. Two hundred and twenty-one decision-makers at administrative and clinical levels. Data presentations in the form of league tables or funnel plots. Number of actions suggested by participants. Proportion of appropriate actions. For all four measures, decision-makers tended to suggest more actions based on the information provided in league tables compared to funnel plots (44% vs. 21%, P decision-makers more often missed to react even when appropriate. The form of data presentation had an influence on decision-making. With league tables, decision-makers tended to suggest more actions compared to funnel plots. A difference in sensitivity and specificity conditioned by the form of presentation could also be identified, with different implications depending on the purpose of comparisons. Explanations and visualization aids are needed to support appropriate actions. © The Author 2016. Published by Oxford University Press in association with the International Society for Quality in Health Care. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com

  16. Enhancing the seismic margin review methodology to obtain risk insights

    International Nuclear Information System (INIS)

    Budnitz, R.J.

    1992-01-01

    This paper discusses methods for obtaining risk insights from the seismic margin review (SMR) methodology. The SMR methodology was originally developed in 1984-1987 with the objective of analyzing an individual nuclear power plant to ascertain whether the plant has the ability to withstand earthquakes substantially beyond the design-basis earthquake without suffering a core-damage accident. Recently, in the context of Nuclear Regulatory Commission's (NRC's) Individual Plant Evaluation for External Events (IPEEE) program, the SMR methodology has been developed further by NRC to allow plants to identify plant-specific vulnerabilities (in the IPEEE sense) to seismic events. The objective of these enhancements has been to provide a methodology for IPEEE seismic review that is substantially less expensive than a full-scope seismic PRA, but that achieves the IPEEE's vulnerability-search objectives. In this paper, the steps involved in the enhanced methodology are discussed

  17. An image processing approach to computing distances between RNA secondary structures dot plots

    Directory of Open Access Journals (Sweden)

    Sapiro Guillermo

    2009-02-01

    Full Text Available Abstract Background Computing the distance between two RNA secondary structures can contribute in understanding the functional relationship between them. When used repeatedly, such a procedure may lead to finding a query RNA structure of interest in a database of structures. Several methods are available for computing distances between RNAs represented as strings or graphs, but none utilize the RNA representation with dot plots. Since dot plots are essentially digital images, there is a clear motivation to devise an algorithm for computing the distance between dot plots based on image processing methods. Results We have developed a new metric dubbed 'DoPloCompare', which compares two RNA structures. The method is based on comparing dot plot diagrams that represent the secondary structures. When analyzing two diagrams and motivated by image processing, the distance is based on a combination of histogram correlations and a geometrical distance measure. We introduce, describe, and illustrate the procedure by two applications that utilize this metric on RNA sequences. The first application is the RNA design problem, where the goal is to find the nucleotide sequence for a given secondary structure. Examples where our proposed distance measure outperforms others are given. The second application locates peculiar point mutations that induce significant structural alternations relative to the wild type predicted secondary structure. The approach reported in the past to solve this problem was tested on several RNA sequences with known secondary structures to affirm their prediction, as well as on a data set of ribosomal pieces. These pieces were computationally cut from a ribosome for which an experimentally derived secondary structure is available, and on each piece the prediction conveys similarity to the experimental result. Our newly proposed distance measure shows benefit in this problem as well when compared to standard methods used for assessing

  18. A methodology for overall consequence modeling in chemical industry

    International Nuclear Information System (INIS)

    Arunraj, N.S.; Maiti, J.

    2009-01-01

    Risk assessment in chemical process industry is a very important issue for safeguarding human and the ecosystem from damages caused to them. Consequence assessment is an integral part of risk assessment. However, the commonly used consequence estimation methods involve time-consuming complex mathematical models and simple assimilation of losses without considering all the consequence factors. This lead to the deterioration of quality of estimated risk value. So, the consequence modeling has to be performed in detail considering all major losses with optimal time to improve the decisive value of risk. The losses can be broadly categorized into production loss, assets loss, human health and safety loss, and environment loss. In this paper, a conceptual framework is developed to assess the overall consequence considering all the important components of major losses. Secondly, a methodology is developed for the calculation of all the major losses, which are normalized to yield the overall consequence. Finally, as an illustration, the proposed methodology is applied to a case study plant involving benzene extraction. The case study result using the proposed consequence assessment scheme is compared with that from the existing methodologies.

  19. How Six Sigma Methodology Improved Doctors' Performance

    Science.gov (United States)

    Zafiropoulos, George

    2015-01-01

    Six Sigma methodology was used in a District General Hospital to assess the effect of the introduction of an educational programme to limit unnecessary admissions. The performance of the doctors involved in the programme was assessed. Ishikawa Fishbone and 5 S's were initially used and Pareto analysis of their findings was performed. The results…

  20. Project Management Methodology in Human Resource Management

    Science.gov (United States)

    Josler, Cheryl; Burger, James

    2005-01-01

    When charged with overseeing a project, how can one ensure that the project will be completed on time, within budget, and to the satisfaction of everyone involved? In this article, the authors examine project management methodology as a means of ensuring that projects are conducted in a disciplined, well-managed and consistent manner that serves…

  1. Ozone exposure, defoliation of beech (Fagus sylvatica L.) and visible foliar symptoms on native plants in selected plots of South-Western Europe

    Energy Technology Data Exchange (ETDEWEB)

    Ferretti, Marco [Dipartimento di Biologia Vegetale, Universita di Firenze, Piazzale Cascine 28, I-50144 Florence (Italy)]. E-mail: m.ferretti@linnaea.it; Calderisi, Marco [Dipartimento di Biologia Vegetale, Universita di Firenze, Piazzale Cascine 28, I-50144 Florence (Italy)]. E-mail: calderisi@chemiometria.it; Bussotti, Filippo [Dipartimento di Biologia Vegetale, Universita di Firenze, Piazzale Cascine 28, I-50144 Florence (Italy)]. E-mail: filippo.bussotti@unifi.it

    2007-02-15

    The relationships between crown defoliation of beech, visible foliar symptoms on native vegetation and ozone exposure were investigated on permanent monitoring sites in South-Western Europe in the years 2000-2002. Relationships between defoliation of beech and O{sub 3} (seasonal mean, 2-week maximum, AOT40) were investigated by means of multiple regression models (11 plots, 1-3 years of data each) and a model based on temporal autocorrelation of defoliation data (14 plots, 1-3 years of data each). Different multiple regression techniques were used. The four models generated (R {sup 2} = 0.71-0.85, explained variance in cross-validation 61-78%) identified several significant predictors of defoliation, with AOT40 (p = 0.008) and foliar content of phosphorous (p = 0.0002-0.0004) being common to all models. The autocorrelation model (R {sup 2} = 0.55; p < 0.0001) was used to calculate expected defoliation on the basis of the previous year's defoliation, and model predictions were used as an estimate of expected defoliation under constant site and environmental condition. Residuals (predicted-measured) plotted against current AOT40 shows that a possible effect of ozone occurs only at very high AOT40 (>35,000 ppbh). O{sub 3}-like visible foliar symptoms were recorded on 65 species at 47% of the common monitoring sites in 2001 and 38% in 2002. No relationship was found between O{sub 3} exposure, frequency of symptomatic sites and frequency of species with symptoms (R {sup 2} = 0.11; p > 0.05). A number of questions related to the ecological and methodological basis of the survey were identified. Inherent sampling and non-sampling errors and multicollinearity of the data suggest great caution when examining results obtained from mensurational, correlative studies. - Ozone AOT40 was identified as a significant predictor of defoliation of beech, but a limited relationship was found between ozone exposure and visible symptoms on native vegetation.

  2. Application of Tryptophan Fluorescence Bandwidth-Maximum Plot in Analysis of Monoclonal Antibody Structure.

    Science.gov (United States)

    Huang, Cheng-Yen; Hsieh, Ming-Ching; Zhou, Qinwei

    2017-04-01

    Monoclonal antibodies have become the fastest growing protein therapeutics in recent years. The stability and heterogeneity pertaining to its physical and chemical structures remain a big challenge. Tryptophan fluorescence has been proven to be a versatile tool to monitor protein tertiary structure. By modeling the tryptophan fluorescence emission envelope with log-normal distribution curves, the quantitative measure can be exercised for the routine characterization of monoclonal antibody overall tertiary structure. Furthermore, the log-normal deconvolution results can be presented as a two-dimensional plot with tryptophan emission bandwidth vs. emission maximum to enhance the resolution when comparing samples or as a function of applied perturbations. We demonstrate this by studying four different monoclonal antibodies, which show the distinction on emission bandwidth-maximum plot despite their similarity in overall amino acid sequences and tertiary structures. This strategy is also used to demonstrate the tertiary structure comparability between different lots manufactured for one of the monoclonal antibodies (mAb2). In addition, in the unfolding transition studies of mAb2 as a function of guanidine hydrochloride concentration, the evolution of the tertiary structure can be clearly traced in the emission bandwidth-maximum plot.

  3. WorkOp-III:94 synopsis. Final-contribution mini plots and tables

    International Nuclear Information System (INIS)

    Serduke, F.

    1995-06-01

    WorkOp-III:94 is the third in a series of Opacity Workshops. The developers of twenty-one codes participated. Thirty-eight plasmas were selected for their relevance to problems of interest or for the challenge they would pose to the models. Frequently-dependent absorption coefficients, mean opacities, ionization distributions and other detailed information were submitted, discussed and resubmitted. This synopsis contains a subset of the information presented at the workshop and in the considerably more extensive, forthcoming, final report. A quick overview of the mean opacities that were submitted can be obtained from the graphical-table plots of the Rosseland and Planck means for all the cases. In addition, for each or the 38 plasma cases, there is a single page of mini plots of all total absorption coefficients submitted plus tables of integral quantities such as mean opacities, chemical potential and average ionization stage

  4. A Computer Program for Drip Irrigation System Design for Small Plots

    Science.gov (United States)

    Philipova, Nina; Nicheva, Olga; Kazandjiev, Valentin; Chilikova-Lubomirova, Mila

    2012-12-01

    A computer programhas been developed for design of surface drip irrigation system. It could be applied for calculation of small scale fields with an area up to 10 ha. The program includes two main parts: crop water requirements and hydraulic calculations of the system. It has been developed in Graphical User Interface in MATLAB and gives opportunity for selecting some parameters from tables such as: agro- physical soil properties, characteristics of the corresponding crop, climatic data. It allows the user of the program to assume and set a definite value, for example the emitter discharge, plot parameters and etc. Eight cases of system layout according to the water source layout and the number of plots of the system operation are laid into hydraulic section of the program. It includes the design of lateral, manifold, main line and pump calculations. The program has been compiled to work in Windows.

  5. WorkOp-III:94 synopsis. Final-contribution mini plots and tables

    Energy Technology Data Exchange (ETDEWEB)

    Serduke, F.

    1995-06-01

    WorkOp-III:94 is the third in a series of Opacity Workshops. The developers of twenty-one codes participated. Thirty-eight plasmas were selected for their relevance to problems of interest or for the challenge they would pose to the models. Frequently-dependent absorption coefficients, mean opacities, ionization distributions and other detailed information were submitted, discussed and resubmitted. This synopsis contains a subset of the information presented at the workshop and in the considerably more extensive, forthcoming, final report. A quick overview of the mean opacities that were submitted can be obtained from the graphical-table plots of the Rosseland and Planck means for all the cases. In addition, for each or the 38 plasma cases, there is a single page of mini plots of all total absorption coefficients submitted plus tables of integral quantities such as mean opacities, chemical potential and average ionization stage.

  6. Methodological Reflections: Inter- ethnic Research

    DEFF Research Database (Denmark)

    Singla, Rashmi

    2010-01-01

    with both youth and the parental generation with ethnic minority background in Denmark. These reflections include implications and challenges related to researcher’s national, ethnic background and educational, professional position in encounter with   diverse ‘researched persons’ such as youth......This article reflects on the methodological and epistemological aspects of the ethical issues involved in encounters between researcher and research participants with ethnic minority background in contexts with diversity. Specific challenges involved in longitudinal research (10 - 15 years......) are also considered. The issues related to the social relevance of the research deriving from psycho political validity implying consideration of power dynamics in the personal, relational and collective domains are included. The primary basis for these reflections is a follow-up study concerning young...

  7. Methodologies for Reservoir Characterization Using Fluid Inclusion Gas Chemistry

    Energy Technology Data Exchange (ETDEWEB)

    Dilley, Lorie M. [Hattenburg Dilley & Linnell, LLC, Anchorage, AL (United States)

    2015-04-13

    The purpose of this project was to: 1) evaluate the relationship between geothermal fluid processes and the compositions of the fluid inclusion gases trapped in the reservoir rocks; and 2) develop methodologies for interpreting fluid inclusion gas data in terms of the chemical, thermal and hydrological properties of geothermal reservoirs. Phase 1 of this project was designed to conduct the following: 1) model the effects of boiling, condensation, conductive cooling and mixing on selected gaseous species; using fluid compositions obtained from geothermal wells, 2) evaluate, using quantitative analyses provided by New Mexico Tech (NMT), how these processes are recorded by fluid inclusions trapped in individual crystals; and 3) determine if the results obtained on individual crystals can be applied to the bulk fluid inclusion analyses determined by Fluid Inclusion Technology (FIT). Our initial studies however, suggested that numerical modeling of the data would be premature. We observed that the gas compositions, determined on bulk and individual samples were not the same as those discharged by the geothermal wells. Gases discharged from geothermal wells are CO2-rich and contain low concentrations of light gases (i.e. H2, He, N, Ar, CH4). In contrast many of our samples displayed enrichments in these light gases. Efforts were initiated to evaluate the reasons for the observed gas distributions. As a first step, we examined the potential importance of different reservoir processes using a variety of commonly employed gas ratios (e.g. Giggenbach plots). The second technical target was the development of interpretational methodologies. We have develop methodologies for the interpretation of fluid inclusion gas data, based on the results of Phase 1, geologic interpretation of fluid inclusion data, and integration of the data. These methodologies can be used in conjunction with the relevant geological and hydrological information on the system to

  8. Managing data from remeasured plots: An evaluation of existing systems

    Science.gov (United States)

    John C. Byrne; Michael D. Sweet

    1992-01-01

    Proper management of the valuable data from remeasured (or permanent) forest growth plots with data base management systems (DBMS) can greatly add to their utility. Twelve desired features for such a system (activities that facilitate the storage, accuracy, and use of the data for analysis) are described and used to evaluate the 36 systems found by a survey conducted...

  9. Quality control of measurements made on fixed-area sample plots

    Science.gov (United States)

    Ola Lindgren

    2000-01-01

    The paper describes results from a large program for quality control of forest measurements. The performance of 87 surveyors was evaluated. Tree heights were usually measured well, whereas the counting of tree-rings on increment cores was a source of considerable bias for many surveyors. During tree count on sample plots, many surveyors had a tendency to forget trees,...

  10. Assessing heterogeneity in soil nitrogen cycling: a plot-scale approach

    Science.gov (United States)

    Peter Baas; Jacqueline E. Mohan; David Markewitz; Jennifer D. Knoepp

    2014-01-01

    The high level of spatial and temporal heterogeneity in soil N cycling processes hinders our ability to develop an ecosystem-wide understanding of this cycle. This study examined how incorporating an intensive assessment of spatial variability for soil moisture, C, nutrients, and soil texture can better explain ecosystem N cycling at the plot scale. Five sites...

  11. Web-Based Search and Plot System for Nuclear Reaction Data

    International Nuclear Information System (INIS)

    Otuka, N.; Nakagawa, T.; Fukahori, T.; Katakura, J.; Aikawa, M.; Suda, T.; Naito, K.; Korennov, S.; Arai, K.; Noto, H.; Ohnishi, A.; Kato, K.

    2005-01-01

    A web-based search and plot system for nuclear reaction data has been developed, covering experimental data in EXFOR format and evaluated data in ENDF format. The system is implemented for Linux OS, with Perl and MySQL used for CGI scripts and the database manager, respectively. Two prototypes for experimental and evaluated data are presented

  12. Productive variability, border use and plot size in trials with cherry tomato

    Directory of Open Access Journals (Sweden)

    Daniel Santos

    2018-02-01

    Full Text Available ABSTRACT: Knowing the productive variability within protected environments is crucial for choosing the experimental design to be used in that conditions. Thus, the aim of the present study was to assess the variability of fruit production in protected environment cultivated with cherry tomatoes and to verify the border effect and plot size in reducing this variability. To this, data from an uniformity test carried out in a greenhouse with cherry tomato cv. ‘Lili’ were used. Total fresh mass of fruits per plant was considered being these plants arranged in cropping rows parallel to the lateral openings of the greenhouse and also the same plants arranged in columns perpendicular to these openings. To generate the borders, different scenarios were designed by excluding rows and columns and using different plot sizes. In each scenario, homogeneity of variances among the remaining rows and columns was tested. There is no variability of fruit production among rows or columns in trials with cherry tomatoes carried out in greenhouses and the use of border does not bring benefits in terms of reduction of coefficient of variation or reduction of cases of variance heterogeneity among rows or columns. Plots with a size equal to or greater than two plants make possible to use the completely randomized design in the cherry tomato trials in greenhouses.

  13. Optimization of ultrasonic-assisted extraction of bioactive alkaloid compounds from rhizoma coptidis (Coptis chinensis Franch.) using response surface methodology.

    Science.gov (United States)

    Teng, Hui; Choi, Yong Hee

    2014-01-01

    The optimum extraction conditions for the maximum recovery of total alkaloid content (TAC), berberine content (BC), palmatine content (PC), and the highest antioxidant capacity (AC) from rhizoma coptidis subjected to ultrasonic-assisted extraction (UAE) were determined using response surface methodology (RSM). Central composite design (CCD) with three variables and five levels was employed, and response surface plots were constructed in accordance with a second order polynomial model. Analysis of variance (ANOVA) showed that the quadratic model was well fitted and significant for responses of TAC, BC, PC, and AA. The optimum conditions obtained through the overlapped contour plot were as follows: ethanol concentration of 59%, extraction time of 46.57min, and temperature of 66.22°C. Verification experiment was carried out, and no significant difference was found between observed and estimated values for each response, suggesting that the estimated models were reliable and valid for UAE of alkaloids. Crown Copyright © 2013. Published by Elsevier Ltd. All rights reserved.

  14. Optimizing variable radius plot size and LiDAR resolution to model standing volume in conifer forests

    Science.gov (United States)

    Ram Kumar Deo; Robert E. Froese; Michael J. Falkowski; Andrew T. Hudak

    2016-01-01

    The conventional approach to LiDAR-based forest inventory modeling depends on field sample data from fixed-radius plots (FRP). Because FRP sampling is cost intensive, combining variable-radius plot (VRP) sampling and LiDAR data has the potential to improve inventory efficiency. The overarching goal of this study was to evaluate the integration of LiDAR and VRP data....

  15. Land rental market, off-farm employment and agricultural production in Southeast China: A plot-level case study

    NARCIS (Netherlands)

    Feng, S.; Heerink, N.; Ruben, R.; Qu, F.

    2010-01-01

    This paper performs a plot-level analysis of the impact of land rental market participation and off-farm employment on land investment, input use, and rice yields for 215 plots cultivated by 52 households in three villages in Northeast Jiangxi Province. Our findings show that households that rent

  16. Tracker Alignment Performance Plots after Commissioning

    CERN Document Server

    CMS Collaboration

    2017-01-01

    During the LHC shutdown in Winter 2016/17, the CMS pixel detector, the inner component of the CMS Tracker, was replaced by the Phase-1 upgrade detector. Among others improvements, the new pixel detector consists of four instead of three layers in the central barrel region (BPIX) and three instead of two disks in the endcap regions (FPIX). In this report, performance plots of pixel detector alignment results are presented, which were obtained with both cosmic-ray and pp collision data acquired at the beginning of the 2017 LHC operation. Alignment constants have been derived for each data-taking period to the level of single module positions in both the pixel and the strip detectors. The complete understanding of the alignment and biases was derived by using two algorithms, Millepede-II and HipPy. The results confirm each other.

  17. Application of SWAT99.2 to sensitivity analysis of water balance components in unique plots in a hilly region

    Directory of Open Access Journals (Sweden)

    Jun-feng Dai

    2017-07-01

    Full Text Available Although many sensitivity analyses using the soil and water assessment tool (SWAT in a complex watershed have been conducted, little attention has been paid to the application potential of the model in unique plots. In addition, sensitivity analysis of percolation and evapotranspiration with SWAT has seldom been undertaken. In this study, SWAT99.2 was calibrated to simulate water balance components for unique plots in Southern China from 2000 to 2001, which included surface runoff, percolation, and evapotranspiration. Twenty-one parameters classified into four categories, including meteorological conditions, topographical characteristics, soil properties, and vegetation attributes, were used for sensitivity analysis through one-at-a-time (OAT sampling to identify the factor that contributed most to the variance in water balance components. The results were shown to be different for different plots, with parameter sensitivity indices and ranks varying for different water balance components. Water balance components in the broad-leaved forest and natural grass plots were most sensitive to meteorological conditions, less sensitive to vegetation attributes and soil properties, and least sensitive to topographical characteristics. Compared to those in the natural grass plot, water balance components in the broad-leaved forest plot demonstrated higher sensitivity to the maximum stomatal conductance (GSI and maximum leaf area index (BLAI.

  18. Program EVALPLOT (Version 79-1): plot data in the Evaluated-Nuclear-Data File/Version B (ENDF/B) format

    International Nuclear Information System (INIS)

    Cullen, D.E.

    1979-01-01

    Program EVALPLOT is designed to plot evaluated cross sections in the ENDF/B format. The program plots cross sections, angular distributions, energy distributions, and parameters (e.g., μ-bar, xi-bar, and ν-bar). 16 figures, 2 tables

  19. Effect of vegetal cover on runoff and soil erosion under light intensity events. Rainfall simulation over USLE plots.

    Science.gov (United States)

    Marques, María José; Bienes, Ramón; Jiménez, Luis; Pérez-Rodríguez, Raquel

    2007-05-25

    The erosive power of frequent light rainfalls is studied in this paper. Field experiments of simulated rainfall (Intensity, 21 mm h(-1) and kinetic energy, 13.5 J m(-2) mm(-1)) were conducted over 8 bounded USLE plots (80 m(2) each) with a slope of 10%. In 4 plots the soil was almost bare (<4% vegetation cover); the other 4 plots had almost full cover with natural vegetation in one year. Runoff and sediment yield was recorded. The results revealed the efficiency of vegetation cover reducing runoff and sediments. Runoff and sediments were negligible in covered plots. Therefore, in bare plots, although sediment yield was generally low, averaging 74+/-43 kg ha(-1), the mean of runoff achieved a coefficient of 35%, this magnitude has to be taken into consideration in this region verging on aridity. Rains around 13.5 J m(-2) mm(-1) of kinetic energy are quite frequent in the study area (34% of recorded rains en 12 years). If we would consider the usual lower limits from the literature, we would be ignoring an important percent of natural rainfall episodes.

  20. Effects of logging and recruitment on community phylogenetic structure in 32 permanent forest plots of Kampong Thom, Cambodia.

    Science.gov (United States)

    Toyama, Hironori; Kajisa, Tsuyoshi; Tagane, Shuichiro; Mase, Keiko; Chhang, Phourin; Samreth, Vanna; Ma, Vuthy; Sokh, Heng; Ichihashi, Ryuji; Onoda, Yusuke; Mizoue, Nobuya; Yahara, Tetsukazu

    2015-02-19

    Ecological communities including tropical rainforest are rapidly changing under various disturbances caused by increasing human activities. Recently in Cambodia, illegal logging and clear-felling for agriculture have been increasing. Here, we study the effects of logging, mortality and recruitment of plot trees on phylogenetic community structure in 32 plots in Kampong Thom, Cambodia. Each plot was 0.25 ha; 28 plots were established in primary evergreen forests and four were established in secondary dry deciduous forests. Measurements were made in 1998, 2000, 2004 and 2010, and logging, recruitment and mortality of each tree were recorded. We estimated phylogeny using rbcL and matK gene sequences and quantified phylogenetic α and β diversity. Within communities, logging decreased phylogenetic diversity, and increased overall phylogenetic clustering and terminal phylogenetic evenness. Between communities, logging increased phylogenetic similarity between evergreen and deciduous plots. On the other hand, recruitment had opposite effects both within and between communities. The observed patterns can be explained by environmental homogenization under logging. Logging is biased to particular species and larger diameter at breast height, and forest patrol has been effective in decreasing logging. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

  1. Size Effect of the 2-D Bodies on the Geothermal Gradient and Q-A Plot

    Science.gov (United States)

    Thakur, M.; Blackwell, D. D.

    2009-12-01

    Using numerical models we have investigated some of the criticisms on the Q-A plot of related to the effect of size of the body on the slope and reduced heat flow. The effects of horizontal conduction depend on the relative difference of radioactivity between the body and the country rock (assuming constant thermal conductivity). Horizontal heat transfer due to different 2-D bodies was numerically studied in order to quantify resulting temperature differences at the Moho and errors on the predication of Qr (reduced heat flow). Using the two end member distributions of radioactivity, the step model (thickness 10km) and exponential model, different 2-D models of horizontal scale (width) ranging from 10 -500 km were investigated. Increasing the horizontal size of the body tends to move observations closer towards the 1-D solution. A temperature difference of 50 oC is produced (for the step model) at Moho between models of width 10 km versus 500 km. In other words the 1-D solution effectively provides large scale averaging in terms of heat flow and temperature field in the lithosphere. For bodies’ ≤ 100 km wide the geotherms at shallower levels are affected, but at depth they converge and are 50 oC lower than that of the infinite plate model temperature. In case of 2-D bodies surface heat flow is decreased due to horizontal transfer of heat, which will shift the Q-A point vertically downward on the Q-A plot. The smaller the size of the body, the more will be the deviation from the 1-D solution and the more will be the movement of Q-A point downwards on a Q-A plot. On the Q-A plot, a limited points of bodies of different sizes with different radioactivity contrast (for the step and exponential model), exactly reproduce the reduced heat flow Qr. Thus the size of the body can affect the slope on a Q-A plot but Qr is not changed. Therefore, Qr ~ 32 mWm-2 obtained from the global terrain average Q-A plot represents the best estimate of stable continental mantle heat

  2. Phenomena based Methodology for Process Synthesis incorporating Process Intensification

    DEFF Research Database (Denmark)

    Lutze, Philip; Babi, Deenesh Kavi; Woodley, John

    2013-01-01

    at processes at the lowest level of aggregation which is the phenomena level. In this paper, a phenomena based synthesis/design methodology incorporating process intensification is presented. Using this methodology, a systematic identification of necessary and desirable (integrated) phenomena as well......Process intensification (PI) has the potential to improve existing as well as conceptual processes, in order to achieve a more sustainable production. PI can be achieved at different levels. That is, the unit operations, functional and/or phenomena level. The highest impact is expected by looking...... as generation and screening of phenomena based flowsheet options are presented using a decomposition based solution approach. The developed methodology as well as necessary tools and supporting methods are highlighted through a case study involving the production of isopropyl-acetate....

  3. Identification of Nigerian English idioms: A methodological perspective

    African Journals Online (AJOL)

    The task becomes more challenging when the feature of interest involves figurative meaning such as idioms and idiomatic expressions. In a recently completed project that sought to examine idioms in Nigerian English, questions and issues about methodology were raised. Among these were the questions of how idioms in ...

  4. The non-linear fitting method to analyze the measured M-S plots of bipolar passive films

    International Nuclear Information System (INIS)

    Jiang Ruijing; Chen Changfeng; Zheng Shuqi

    2010-01-01

    Mott-Schottky (M-S) analysis is an effective approach to investigate the electronic property of passive films of metals, and it is well suitable for the passive film with single space charge capacitance. But there is no proper method to analyze the C sc -2 vs. V m plots of passive films with several space charge capacitances in series connection, such as bipolar passive films. In this paper, the relationship between the space charge capacitance of the bipolar passive film and the applied potential was deduced and the features of corresponding plots were given out simultaneously. Accordingly, a non-linear fitting method was presented to analyze the C sc -2 vs. V m plots of bipolar passive films. Then the method was used to study the semiconductor characteristics of bipolar passive films formed on the surface of Nickel base alloy after being corroded in the environments with high temperatures and high partial pressures of H 2 S/CO 2 . The fitting results indicate that the non-linear fitting of M-S plots can well help to understand the anti-corrosion mechanism of bipolar passive films.

  5. Recovery of heart rate variability after treadmill exercise analyzed by lagged Poincaré plot and spectral characteristics.

    Science.gov (United States)

    Shi, Ping; Hu, Sijung; Yu, Hongliu

    2018-02-01

    The aim of this study was to analyze the recovery of heart rate variability (HRV) after treadmill exercise and to investigate the autonomic nervous system response after exercise. Frequency domain indices, i.e., LF(ms 2 ), HF(ms 2 ), LF(n.u.), HF(n.u.) and LF/HF, and lagged Poincaré plot width (SD1 m ) and length (SD2 m ) were introduced for comparison between the baseline period (Pre-E) before treadmill running and two periods after treadmill running (Post-E1 and Post-E2). The correlations between lagged Poincaré plot indices and frequency domain indices were applied to reveal the long-range correlation between linear and nonlinear indices during the recovery of HRV. The results suggested entirely attenuated autonomic nervous activity to the heart following the treadmill exercise. After the treadmill running, the sympathetic nerves achieved dominance and the parasympathetic activity was suppressed, which lasted for more than 4 min. The correlation coefficients between lagged Poincaré plot indices and spectral power indices could separate not only Pre-E and two sessions after the treadmill running, but also the two sessions in recovery periods, i.e., Post-E1 and Post-E2. Lagged Poincaré plot as an innovative nonlinear method showed a better performance over linear frequency domain analysis and conventional nonlinear Poincaré plot.

  6. Relative equilibrium plot improves graphical analysis and allows bias correction of SUVR in quantitative [11C]PiB PET studies

    OpenAIRE

    Zhou, Yun; Sojkova, Jitka; Resnick, Susan M.; Wong, Dean F.

    2012-01-01

    Both the standardized uptake value ratio (SUVR) and the Logan plot result in biased distribution volume ratios (DVR) in ligand-receptor dynamic PET studies. The objective of this study is to use a recently developed relative equilibrium-based graphical plot (RE plot) method to improve and simplify the two commonly used methods for quantification of [11C]PiB PET.

  7. Prognostic value of Poincare plot as nonlinear parameter of chaos theory in patients with myocardial infarction

    Directory of Open Access Journals (Sweden)

    Milovanović Branislav

    2007-01-01

    Full Text Available Introduction: There are different proofs about association of autonomic nervous system dysfunction, especially nonlinear parameters, with higher mortality after myocardial infarction. Objective The objective of the study was to determine predictive value of Poincare plot as nonlinear parameter and other significant standard risk predictors: ejection fraction of the left ventricle, late potentials, ventricular arrhythmias, and QT interval. Method The study included 1081 patients with mean follow up of 28 months (ranging fom 0-80 months. End-point of the study was cardiovascular mortality. The following diagnostic methods were used during the second week: ECG with commercial software Schiller AT-10: short time spectral analysis of RR variability with analysis of Poincare plot as nonlinear parameter and late potentials; 24-hour ambulatory ECG monitoring: QT interval, RR interval, QT/RR slope, ventricular arrhythmias (Lown >II; echocardiography examinations: systolic disorder (defined as EF<40 %. Results There were 103 (9.52% cardiovascular deaths during the follow-up. In univariate analysis, the following parameters were significantly correlated with mortality: mean RR interval < 800 ms, QT and RR interval space relationship as mean RR interval < 800 ms and QT interval > 350 ms, positive late potentials, systolic dysfunction, Poincare plot as a point, ventricular arrhythmias (Lown > II. In multivariate analysis, the significant risk predictors were: Poincare plot as a point and mean RR interval lower than 800 ms. Conclusion Mean RR interval lower than 800 ms and nonlinear and space presentation of RR interval as a point Poincare plot were multivariate risk predictors.

  8. Soil aggregate stability and rainfall-induced sediment transport on field plots as affected by amendment with organic matter inputs

    Science.gov (United States)

    Shi, Pu; Arter, Christian; Liu, Xingyu; Keller, Martin; Schulin, Rainer

    2017-04-01

    Aggregate stability is an important factor in soil resistance against erosion, and, by influencing the extent of sediment transport associated with surface runoff, it is thus also one of the key factors which determine on- and off-site effects of water erosion. As it strongly depends on soil organic matter, many studies have explored how aggregate stability can be improved by organic matter inputs into the soil. However, the focus of these studies has been on the relationship between aggregate stability and soil organic matter dynamics. How the effects of organic matter inputs on aggregate stability translate into soil erodibility under rainfall impacts has received much less attention. In this study, we performed field plot experiments to examine how organic matter inputs affect aggregate breakdown and surface sediment transport under field conditions in artificial rainfall events. Three pairs of plots were prepared by adding a mixture of grass and wheat straw to one of plots in each pair but not to the other, while all plots were treated in the same way otherwise. The rainfall events were applied some weeks later so that the applied organic residues had sufficient time for decomposition and incorporation into the soil. Surface runoff rate and sediment concentration showed substantial differences between the treatments with and without organic matter inputs. The plots with organic inputs had coarser and more stable aggregates and a rougher surface than the control plots without organic inputs, resulting in a higher infiltration rate and lower transport capacity of the surface runoff. Consequently, sediments exported from the amended plots were less concentrated but more enriched in suspended particles (selective sediment transport. In contrast to the amended plots, there was an increase in the coarse particle fraction (> 250 µm) in the runoff from the plots with no organic matter inputs towards the end of the rainfall events due to emerging bed-load transport

  9. How effective are soil conservation techniques in reducing plot runoff and soil loss in Europe and the Mediterranean?

    Science.gov (United States)

    Maetens, W.; Poesen, J.; Vanmaercke, M.

    2012-10-01

    The effects of soil and water conservation techniques (SWCTs) on annual runoff (Ra), runoff coefficients (RCa) and annual soil loss (SLa) at the plot scale have been extensively tested on field runoff plots in Europe and the Mediterranean. Nevertheless, a comprehensive overview of these effects and the factors controlling the effectiveness of SWCTs is lacking. Especially the effectiveness of SWCT in reducing Ra is poorly understood. Therefore, an extensive literature review is presented that compiles the results of 101 earlier studies. In each of these studies, Ra and SLa was measured on field runoff plots where various SWCTs were tested. In total, 353 runoff plots (corresponding to 2093 plot-years of data) for 103 plot-measuring stations throughout Europe and the Mediterranean were considered. SWCTs include (1) crop and vegetation management (i.e. cover crops, mulching, grass buffer strips, strip cropping and exclosure), (2) soil management (i.e. no-tillage, reduced tillage, contour tillage, deep tillage, drainage and soil amendment) and (3) mechanical methods (i.e. terraces, contour bunds and geotextiles). Comparison of the frequency distributions of SLa rates on cropland without and with the application of SWCTs shows that the exceedance probability of tolerable SLa rates is ca. 20% lower when SWCT are applied. However, no notable effect of SWCTs on the frequency distribution of RCa is observed. For 224 runoff plots (corresponding to 1567 plot-year data), SWCT effectiveness in reducing Ra and/or SLa could be directly calculated by comparing measured Ra and/or SLa with values measured on a reference plot with conventional management. Crop and vegetation management techniques (i.e. buffer strips, mulching and cover crops) and mechanical techniques (i.e. geotextiles, contour bunds and terraces) are generally more effective than soil management techniques (i.e. no-tillage, reduced tillage and contour tillage). Despite being generally less effective, no

  10. Establishing a long-term permanent plot in remnant forest of Cibodas Botanic Garden, West Java

    Directory of Open Access Journals (Sweden)

    ZAENAL MUTAQIEN

    2011-10-01

    Full Text Available Mutaqien Z, Zuhri M (2011 Establishing a long-term permanent plot in remnant forest of Cibodas Botanic Garden, West Java. Biodiversitas 12: 218-224. Cibodas Botanic Garden (CBG has unique characters; almost 10% of which is forested area adjacent to the natural forest of Mt. Gede Pangrango National Park. The area is a transition between natural forest and artificial habitat which mostly consists of exotic plant species. The permanent plot in CBG was established in 2007-2009. Two hundred and eighty four units of 10x10 square meters sub-plot were established in four locations, i.e. Wornojiwo, Kompos, Jalan Akar, and Lumut forest. Vegetation analyses were conducted for trees, saplings, shrubs, and herb species. The inventory found 137 species plants consisting of 74 tree species dominated by Villebrunea rubescens (Bl. Bl. and Ostodes paniculata Bl., 30 shrub species dominated by Strobilanthes hamiltoniana (Steud., 24 herb species dominated by Cyrtandra picta Bl., 6 fern species mainly consisted of Diplazium pallidum Moore, and 3 climber species dominated by Calamus reinwardtii Mart. In comparison with the natural forest of Mt. Gede Pangrango National Park, the CBG permanent plot showed a good representative of the vegetation of lower montane forest. A regular monitoring during the successive years is needed to maintain diversity, monitor forest dynamics and anticipate the spread of invasive plant from CBG.

  11. A theorem on the methodology of positive economics

    Directory of Open Access Journals (Sweden)

    Eduardo Pol

    2015-12-01

    Full Text Available It has long been recognized that the Milton Friedman’s 1953 essay on economic methodology (or F53, for short displays open-ended unclarities. For example, the notion of “unrealistic assumption” plays a role of absolutely fundamental importance in his methodological framework, but the term itself was never unambiguously defined in any of the Friedman’s contributions to the economics discipline. As a result, F53 is appealing and liberating because the choice of premises in economic theorizing is not subject to any constraints concerning the degree of realisticness (or unrealisticness of the assumptions. The question: “Does the methodology of positive economics prevent the overlapping between economics and science fiction?” comes very naturally, indeed. In this paper, we show the following theorem: the Friedman’s methodology of positive economics does not exclude science fiction. This theorem is a positive statement, and consequently, it does not involve value judgements. However, it throws a wrench on the formulation of economic policy based on surreal models.

  12. The death of the Job plot, transparency, open science and online tools, uncertainty estimation methods and other developments in supramolecular chemistry data analysis.

    Science.gov (United States)

    Brynn Hibbert, D; Thordarson, Pall

    2016-10-25

    Data analysis is central to understanding phenomena in host-guest chemistry. We describe here recent developments in this field starting with the revelation that the popular Job plot method is inappropriate for most problems in host-guest chemistry and that the focus should instead be on systematically fitting data and testing all reasonable binding models. We then discuss approaches for estimating uncertainties in binding studies using case studies and simulations to highlight key issues. Related to this is the need for ready access to data and transparency in the methodology or software used, and we demonstrate an example a webportal () that aims to address this issue. We conclude with a list of best-practice protocols for data analysis in supramolecular chemistry that could easily be translated to other related problems in chemistry including measuring rate constants or drug IC 50 values.

  13. Taking a Distributed Perspective: Epistemological and Methodological Tradeoffs in Operationalizing the Leader-Plus Aspect

    Science.gov (United States)

    Spillane, James P.; Camburn, Eric M.; Pustejovsky, James; Pareja, Amber Stitziel; Lewis, Geoff

    2008-01-01

    Purpose: This paper is concerned with the epistemological and methodological challenges involved in studying the distribution of leadership across people within the school--the leader-plus aspect of a distributed perspective, which it aims to investigate. Design/methodology/approach: The paper examines the entailments of the distributed…

  14. APPLE, Plot of 1-D Multigroup Neutron Flux and Gamma Flux and Reaction Rates from ANISN

    International Nuclear Information System (INIS)

    Kawasaki, Hiromitsu; Seki, Yasushi

    1983-01-01

    A - Description of problem or function: The APPLE-2 code has the following functions: (1) It plots multi-group energy spectra of neutron and/or gamma ray fluxes calculated by ANISN, DOT-3.5, and MORSE. (2) It gives an overview plot of multi-group neutron fluxes calculated by ANISN and DOT-3.5. The scalar neutron flux phi(r,E) is plotted with the spatial parameter r linear along the Y-axis, logE along the X-axis and log phi(r,E) in the Z direction. (3) It calculates the spatial distribution and region volume integrated values of reaction rates using the scalar flux calculated with ANISN and DOT-3.5. (4) Reaction rate distribution along the R or Z direction may be plotted. (5) An overview plot of reaction rates or scalar fluxes summed over specified groups may be plotted. R(ri,zi) or phi(ri,zi) is plotted with spatial parameters r and z along the X- and Y-axes in an orthogonal coordinate system. (6) Angular flux calculated by ANISN is rearranged and a shell source at any specified spatial mesh point may be punched out in FIDO format. The shell source obtained may be employed in solving deep penetration problems with ANISN, when the entire reactor system is divided into two or more parts and the neutron fluxes in two adjoining parts are connected by using the shell source. B - Method of solution: (a) The input data specification is made as simple as possible by making use of the input data required in the radiation transport code. For example, geometry related data in ANISN and DOT are transmitted to APPLE-2 along with scalar flux data so as to reduce duplicity and errors in reproducing these data. (b) Most the input data follow the free form FIDO format developed at Oak Ridge National Laboratory and used in the ANISN code. Furthermore, the mixture specifying method used in ANISN is also employed by APPLE-2. (c) Libraries for some standard response functions required in fusion reactor design have been prepared and are made available to users of the 42-group neutron

  15. Methodology for high-throughput field phenotyping of canopy temperature using airborne thermography

    Directory of Open Access Journals (Sweden)

    David Matthew Deery

    2016-12-01

    Full Text Available Lower canopy temperature (CT, resulting from increased stomatal conductance, has been associated with increased yield in wheat. Historically, CT has been measured with hand-held infrared thermometers. Using the hand-held CT method on large field trials is problematic, mostly because measurements are confounded by temporal weather changes during the time requiredto measure all plots. The hand-held CT method is laborious and yet the resulting heritability low, thereby reducing confidence in selection in large scale breeding endeavours.We have developed a reliable and scalable crop phenotyping method for assessing CT in large field experiments. The method involves airborne thermography from a manned helicopter using a radiometrically-calibrated thermal camera. Thermal image data is acquired from large experiments in the order of seconds, thereby enabling simultaneous measurement of CT on potentially 1,000s of plots. Effects of temporal weather variation when phenotyping large experiments using hand-held infrared thermometers are therefore reduced. The method is designed for cost-effective and large-scale use by the non-technical user and includes custom-developed software for data processing to obtain CT data on a single-plot basis for analysis.Broad-sense heritability was routinely greater than 0.50, and as high as 0.79, for airborne thermography CT measured near anthesis on a wheat experiment comprising 768 plots of size 2 x 6 m. Image analysis based on the frequency distribution of temperature pixels to remove the possible influence of background soil did not improve broad-sense heritability. Total imageacquisition and processing time was ca. 25 min and required only one person (excluding the helicopter pilot. The results indicate the potential to phenotype CT on large populations in genetics studies or for selection within a plant breeding program.

  16. Advanced Poincaré plot analysis differentiates between hypertensive pregnancy disorders.

    Science.gov (United States)

    Seeck, A; Baumert, M; Fischer, C; Khandoker, A; Faber, R; Voss, A

    2011-10-01

    Hypertensive pregnancy disorders affect 6% to 8% of all pregnancies and can result in severe complications for the mother and the foetus of which pre-eclampsia (PE) has the worst perinatal outcome. Several studies suggested that the autonomic nervous system plays an important role in the process of developing hypertensive pregnancy disorders, especially PE. The aim of this retrospective study was to investigate whether women with PE could be differentiated from women with various other hypertensive pregnancy disorders, by employing an enhanced Poincaré plot analysis (PPA), the segmented Poincaré plot analysis (SPPA), to their beat-to-beat interval and blood pressure signals. Sixty-nine pregnant women with hypertensive disorders (29 PE, 40 with chronic or gestational hypertension) were included. The SPPA as well as the traditional PPA found significant differences between PE and other hypertensive disorders of diastolic blood pressure (p analysis demonstrated that indices derived from SPPA are more suitable for differentiation between chronic and gestational hypertension and PE than those from traditional PPA (area under the ROC curve 0.85 versus 0.69). Therefore this procedure could contribute to the differential diagnosis of hypertensive pregnancy disorders.

  17. PLOTNFIT.4TH, Data Plotting and Curve Fitting by Polynomials

    International Nuclear Information System (INIS)

    Schiffgens, J.O.

    1990-01-01

    1 - Description of program or function: PLOTnFIT is used for plotting and analyzing data by fitting nth degree polynomials of basis functions to the data interactively and printing graphs of the data and the polynomial functions. It can be used to generate linear, semi-log, and log-log graphs and can automatically scale the coordinate axes to suit the data. Multiple data sets may be plotted on a single graph. An auxiliary program, READ1ST, is included which produces an on-line summary of the information contained in the PLOTnFIT reference report. 2 - Method of solution: PLOTnFIT uses the least squares method to calculate the coefficients of nth-degree (up to 10. degree) polynomials of 11 selected basis functions such that each polynomial fits the data in a least squares sense. The procedure incorporated in the code uses a linear combination of orthogonal polynomials to avoid 'i11-conditioning' and to perform the curve fitting task with single-precision arithmetic. 3 - Restrictions on the complexity of the problem - Maxima of: 225 data points per job (or graph) including all data sets 8 data sets (or tasks) per job (or graph)

  18. Isocratic and gradient impedance plot analysis and comparison of some recently introduced large size core-shell and fully porous particles.

    Science.gov (United States)

    Vanderheyden, Yoachim; Cabooter, Deirdre; Desmet, Gert; Broeckhoven, Ken

    2013-10-18

    The intrinsic kinetic performance of three recently commercialized large size (≥4μm) core-shell particles packed in columns with different lengths has been measured and compared with that of standard fully porous particles of similar and smaller size (5 and 3.5μm, respectively). The kinetic performance is compared in both absolute (plot of t0 versus the plate count N or the peak capacity np for isocratic and gradient elution, respectively) and dimensionless units. The latter is realized by switching to so-called impedance plots, a format which has been previously introduced (as a plot of t0/N(2) or E0 versus Nopt/N) and has in the present study been extended from isocratic to gradient elution (where the impedance plot corresponds to a plot of t0/np(4) versus np,opt(2)/np(2)). Both the isocratic and gradient impedance plot yielded a very similar picture: the clustered impedance plot curves divide into two distinct groups, one for the core-shell particles (lowest values, i.e. best performance) and one for the fully porous particles (highest values), confirming the clear intrinsic kinetic advantage of core-shell particles. If used around their optimal flow rate, the core-shell particles displayed a minimal separation impedance that is about 40% lower than the fully porous particles. Even larger gains in separation speed can be achieved in the C-term regime. Copyright © 2013 Elsevier B.V. All rights reserved.

  19. Hydrological Modelling Using a Rainfall Simulator over an Experimental Hillslope Plot

    Directory of Open Access Journals (Sweden)

    Arpit Chouksey

    2017-03-01

    Full Text Available Hydrological processes are complex to compute in hilly areas when compared to plain areas. The governing processes behind runoff generation on hillslopes are subsurface storm flow, saturation excess flow, overland flow, return flow and pipe storage. The simulations of the above processes in the soil matrix require detailed hillslope hydrological modelling. In the present study, a hillslope experimental plot has been designed to study the runoff generation processes on the plot scale. The setup is designed keeping in view the natural hillslope conditions prevailing in the Northwestern Himalayas, India where high intensity rainfall events occur frequently. A rainfall simulator was installed over the experimental hillslope plot to generate rainfall with an intensity of 100 mm/h, which represents the dominating rainfall intensity range in the region. Soil moisture sensors were also installed at variable depths from 100 to 1000 mm at different locations of the plot to observe the soil moisture regime. From the experimental observations it was found that once the soil is saturated, it remains at field capacity for the next 24–36 h. Such antecedent moisture conditions are most favorable for the generation of rapid stormflow from hillslopes. A dye infiltration test was performed on the undisturbed soil column to observe the macropore fraction variability over the vegetated hillslopes. The estimated macropore fractions are used as essential input for the hillslope hydrological model. The main objective of the present study was to develop and test a method for estimating runoff responses from natural rainfall over hillslopes of the Northwestern Himalayas using a portable rainfall simulator. Using the experimental data and the developed conceptual model, the overland flow and the subsurface flow through a macropore-dominated area have been estimated/analyzed. The surface and subsurface runoff estimated using the developed hillslope hydrological model

  20. Base line definitions and methodological lessons from Zimbabwe

    International Nuclear Information System (INIS)

    Maya, R.S.

    1995-01-01

    The UNEP Greenhouse Gas Abatement Costing Studies carried out under the management of the UNEP Collaborating Centre On Energy and Environment at Risoe National Laboratories in Denmark has placed effort in generating methodological approaches to assessing the cost of abatement activities to reduce CO 2 emissions. These efforts have produced perhaps the most comprehensive set of methodological approaches to defining and assessing the cost of greenhouse gas abatement. Perhaps the most importance aspect of the UNEP study which involved teams of researchers from ten countries is the mix of countries in which the studies were conducted and hence the representation of views and concepts from researchers in these countries particularly those from developing countries namely, Zimbabwe, India, Venezuela, Brazil, Thailand and Senegal. Methodological lessons from Zimbabwe, therefore, would have benefited from the interactions with methodological experiences form the other participating countries. Methodological lessons from the Zimbabwean study can be placed in two categories. One relates to the modelling of tools to analyze economic trends and the various factors studied in order to determine the unit cost of CO 2 abatement. The other is the definition of factors influencing the levels of emissions reducible and those realised under specific economic trends. (au)

  1. Design methodology for bio-based processing: Biodiesel and fatty alcohol production

    DEFF Research Database (Denmark)

    Simasatikul, Lida; Arpornwichanopa, Amornchai; Gani, Rafiqul

    2013-01-01

    A systematic design methodology is developed for producing multiple main products plus side products starting with one or more bio-based renewable source. A superstructure that includes all possible reaction and separation operations is generated through thermodynamic insights and available data........ Economic analysis and net present value are determined to find the best economically and operationally feasible process. The application of the methodology is presented through a case study involving biodiesel and fatty alcohol productions....

  2. A foundation of ecology rediscovered: 100 years of succession on the William S. Cooper plots in Glacier Bay, Alaska.

    Science.gov (United States)

    Buma, Brian; Bisbing, Sarah; Krapek, John; Wright, Glenn

    2017-06-01

    Understanding plant community succession is one of the original pursuits of ecology, forming some of the earliest theoretical frameworks in the field. Much of this was built on the long-term research of William S. Cooper, who established a permanent plot network in Glacier Bay, Alaska, in 1916. This study now represents the longest-running primary succession plot network in the world. Permanent plots are useful for their ability to follow mechanistic change through time without assumptions inherent in space-for-time (chronosequence) designs. After 100-yr, these plots show surprising variety in species composition, soil characteristics (carbon, nitrogen, depth), and percent cover, attributable to variation in initial vegetation establishment first noted by Cooper in the 1916-1923 time period, partially driven by dispersal limitations. There has been almost a complete community composition replacement over the century and general species richness increase, but the effective number of species has declined significantly due to dominance of Salix species which established 100-yr prior (the only remaining species from the original cohort). Where Salix dominates, there is no establishment of "later" successional species like Picea. Plots nearer the entrance to Glacier Bay, and thus closer to potential seed sources after the most recent glaciation, have had consistently higher species richness for 100 yr. Age of plots is the best predictor of soil N content and C:N ratio, though plots still dominated by Salix had lower overall N; soil accumulation was more associated with dominant species. This highlights the importance of contingency and dispersal in community development. The 100-yr record of these plots, including species composition, spatial relationships, cover, and observed interactions between species provides a powerful view of long-term primary succession. © 2017 by the Ecological Society of America.

  3. Design of an Emulsion-based Personal Detergent through a Model-based Chemical Product Design Methodology

    DEFF Research Database (Denmark)

    Mattei, Michele; Hill, Michael; Kontogeorgis, Georgios

    2013-01-01

    An extended systematic methodology for the design of emulsion-based Chemical products is presented. The methodology consists of a model-based framework involving seven sequential hierarchical steps: starting with the identification of the needs to be satisfied by the product and then adding one-b...... to obtain one or more candidate formulations. A conceptual casestudy representing a personal detergent is presented to highlight the methodology....

  4. Design of an Emulsion-based Personal Detergent through a Model-based Chemical Product Design Methodology

    DEFF Research Database (Denmark)

    Mattei, Michele; Hill, Michael; Kontogeorgis, Georgios

    2013-01-01

    An extended systematic methodology for the design of emulsion-based Chemical products is presented. The methodology consists of a model-based framework involving seven sequential hierarchical steps: starting with the identification of the needs to be satisfied by the product and then adding one...... to obtain one or more candidate formulations. A conceptual casestudy representing a personal detergent is presented to highlight the methodology....

  5. On the use of visual methodologies in educational policy research

    African Journals Online (AJOL)

    methodological and policy implications that could be applied to a variety of ... approach involves the analysis of images, including the context, content, and .... to govern, modern states have participated in shaping and handling the behaviour of ...

  6. The detectability of nitrous oxide mitigation efficacy in intensively grazed pastures using a multiple plot micrometeorological technique

    Science.gov (United States)

    McMillan, A. M. S.; Harvey, M. J.; Martin, R. J.; Bromley, A. M.; Evans, M. J.; Mukherjee, S.; Laubach, J.

    2013-10-01

    Methodologies are required to verify agricultural greenhouse gas mitigation at scales relevant to farm management. Micrometeorological techniques provide a viable approach for comparing fluxes between fields receiving mitigation treatments and control fields. However, they have rarely been applied to spatially verifying treatments aimed at mitigating nitrous oxide emission from intensively grazed pastoral systems. We deployed a micrometeorological system to compare N2O flux among several ~ 1.5 ha plots in intensively grazed dairy pasture. The sample collection and measurement system is referred to as the Field-Scale Nitrous Oxide Mitigation Assessment System (FS-NOMAS) and used a tuneable diode laser absorption spectrometer to measure N2O gradients to high precision at four locations along a 300 m transect. The utility of the FS-NOMAS to assess mitigation efficacy depends largely on its ability to resolve very small vertical N2O gradients. The performance of the FS-NOMAS was assessed in this respect in laboratory and field-based studies. The FS-NOMAS could reliably resolve gradients of 0.039 ppb between a height of 0.5 m and 1.0 m. The gradient resolution achieved corresponded to the ability to detect an inter-plot N2O flux difference of 26.4 μg N2O-N m-2 h-1 under the most commonly encountered conditions of atmospheric mixing (quantified here by a turbulent transfer coefficient), but this ranged from 11 to 59 μg N2O-N m-2 h-1 as the transfer coefficient ranged between its 5th and 95th percentile. Assuming a likely value of 100 μg N2O-N m-2 h-1 for post-grazing N2O fluxes from intensively grazed New Zealand dairy pasture, the system described here would be capable of detecting a mitigation efficacy of 26% for a single (40 min) comparison. We demonstrate that the system has considerably greater sensitivity to treatment effects by measuring cumulative fluxes over extended periods.

  7. The detectability of nitrous oxide mitigation efficacy in intensively grazed pastures using a multiple-plot micrometeorological technique

    Directory of Open Access Journals (Sweden)

    A. M. S. McMillan

    2014-05-01

    Full Text Available Methodologies are required to verify agricultural greenhouse gas mitigation at scales relevant to farm management. Micrometeorological techniques provide a viable approach for comparing fluxes between fields receiving mitigation treatments and control fields. However, they have rarely been applied to spatially verifying treatments aimed at mitigating nitrous oxide emission from intensively grazed pastoral systems. We deployed a micrometeorological system to compare N2O flux among several ~1.5 ha plots in intensively grazed dairy pasture. The sample collection and measurement system is referred to as the Field-Scale Nitrous Oxide Mitigation Assessment System (FS-NOMAS and used a tuneable diode laser absorption spectrometer to measure N2O gradients to high precision at four locations along a 300 m transect. The utility of the FS-NOMAS to assess mitigation efficacy depends largely on its ability to resolve very small vertical N2O gradients. The performance of the FS-NOMAS was assessed in this respect in laboratory and field-based studies. The FS-NOMAS could reliably resolve gradients of 0.039 ppb between a height of 0.5 and 1.0 m. The gradient resolution achieved corresponded to the ability to detect an inter-plot N2O flux difference of 26 μg N2O–N m−2 h−1 under the most commonly encountered conditions of atmospheric mixing (quantified here by a turbulent transfer coefficient, but this ranged from 11 to 59 μg N2O–N m−2 h−1 as the transfer coefficient ranged between its 5th and 95th percentile. Assuming a likely value of 100 μg N2O–N m−2 h−1 for post-grazing N2O fluxes from intensively grazed New Zealand dairy pasture, the system described here would be capable of detecting a mitigation efficacy of 26% for a single (40 min comparison. We demonstrate that the system has considerably greater sensitivity to treatment effects by measuring cumulative fluxes over extended periods.

  8. The detectability of nitrous oxide mitigation efficacy in intensively grazed pastures using a multiple-plot micrometeorological technique

    Science.gov (United States)

    McMillan, A. M. S.; Harvey, M. J.; Martin, R. J.; Bromley, A. M.; Evans, M. J.; Mukherjee, S.; Laubach, J.

    2014-05-01

    Methodologies are required to verify agricultural greenhouse gas mitigation at scales relevant to farm management. Micrometeorological techniques provide a viable approach for comparing fluxes between fields receiving mitigation treatments and control fields. However, they have rarely been applied to spatially verifying treatments aimed at mitigating nitrous oxide emission from intensively grazed pastoral systems. We deployed a micrometeorological system to compare N2O flux among several ~1.5 ha plots in intensively grazed dairy pasture. The sample collection and measurement system is referred to as the Field-Scale Nitrous Oxide Mitigation Assessment System (FS-NOMAS) and used a tuneable diode laser absorption spectrometer to measure N2O gradients to high precision at four locations along a 300 m transect. The utility of the FS-NOMAS to assess mitigation efficacy depends largely on its ability to resolve very small vertical N2O gradients. The performance of the FS-NOMAS was assessed in this respect in laboratory and field-based studies. The FS-NOMAS could reliably resolve gradients of 0.039 ppb between a height of 0.5 and 1.0 m. The gradient resolution achieved corresponded to the ability to detect an inter-plot N2O flux difference of 26 μg N2O-N m-2 h-1 under the most commonly encountered conditions of atmospheric mixing (quantified here by a turbulent transfer coefficient), but this ranged from 11 to 59 μg N2O-N m-2 h-1 as the transfer coefficient ranged between its 5th and 95th percentile. Assuming a likely value of 100 μg N2O-N m-2 h-1 for post-grazing N2O fluxes from intensively grazed New Zealand dairy pasture, the system described here would be capable of detecting a mitigation efficacy of 26% for a single (40 min) comparison. We demonstrate that the system has considerably greater sensitivity to treatment effects by measuring cumulative fluxes over extended periods.

  9. Ozone exposure, defoliation of beech (Fagus sylvatica L.) and visible foliar symptoms on native plants in selected plots of South-Western Europe

    International Nuclear Information System (INIS)

    Ferretti, Marco; Calderisi, Marco; Bussotti, Filippo

    2007-01-01

    The relationships between crown defoliation of beech, visible foliar symptoms on native vegetation and ozone exposure were investigated on permanent monitoring sites in South-Western Europe in the years 2000-2002. Relationships between defoliation of beech and O 3 (seasonal mean, 2-week maximum, AOT40) were investigated by means of multiple regression models (11 plots, 1-3 years of data each) and a model based on temporal autocorrelation of defoliation data (14 plots, 1-3 years of data each). Different multiple regression techniques were used. The four models generated (R 2 = 0.71-0.85, explained variance in cross-validation 61-78%) identified several significant predictors of defoliation, with AOT40 (p = 0.008) and foliar content of phosphorous (p = 0.0002-0.0004) being common to all models. The autocorrelation model (R 2 = 0.55; p 35,000 ppbh). O 3 -like visible foliar symptoms were recorded on 65 species at 47% of the common monitoring sites in 2001 and 38% in 2002. No relationship was found between O 3 exposure, frequency of symptomatic sites and frequency of species with symptoms (R 2 = 0.11; p > 0.05). A number of questions related to the ecological and methodological basis of the survey were identified. Inherent sampling and non-sampling errors and multicollinearity of the data suggest great caution when examining results obtained from mensurational, correlative studies. - Ozone AOT40 was identified as a significant predictor of defoliation of beech, but a limited relationship was found between ozone exposure and visible symptoms on native vegetation

  10. Technologies for Teaching and Learning about Box Plots and Statistical Analysis

    Science.gov (United States)

    Forster, Patricia A.

    2007-01-01

    This paper analyses technology-based instruction on data-analysis with box plots. Examples of instruction taken from the research literature inform a study of two classes of 17 year-old students (upper secondary) in which the mathematical relationships that their teachers targeted are distinguished as being, or not being, relevant to statistical…

  11. Translating Oral Health-Related Quality of Life Measures: Are There Alternative Methodologies?

    Science.gov (United States)

    Brondani, Mario; He, Sarah

    2013-01-01

    Translating existing sociodental indicators to another language involves a rigorous methodology, which can be costly. Free-of-charge online translator tools are available, but have not been evaluated in the context of research involving quality of life measures. To explore the value of using online translator tools to develop oral health-related…

  12. New systems for photogrametric plotting

    International Nuclear Information System (INIS)

    Diaz Munoz, J.J.; Sarti Balsalobre, F.

    1995-01-01

    Ground photogrammetry is a highly useful technique for up-dating as-built documentation of nuclear power plants as it has the following advantages: - It reduces radiation exposure - It provides information concerning all the structures, equipment, components, pipe lines, etc, in the zone - it avoids errors made in the interpretation of drawings In the past, the application of non-topographic photogrammetry was limited by the need to use costly restitution equipment, until computer technology made it possible to operate complete photogrametric systems using a PC, digitizer, the appropriate software and a simple 35 mm camera. It is not necessary to use a tripod, or known the location of the camera or that the photographs are stereoscopic pairs. The plotting process is basically reduced to placing the photographs on the digitizing board, making the necessary adjustments and obtaining the coordinates of each point indicated. This paper explains the new photogrametric tools currently on the market, the theory behind them, and their advantages and disadvantages. It also describes some of the applications of advanced photogrammetry applied to design modifications in the nuclear sector, performed using the Empresarios Agrupados Metadat System. (Author)

  13. Native plant recovery in study plots after fennel (Foeniculum vulgare) control on Santa Cruz Island

    Science.gov (United States)

    Power, Paula; Stanley, Thomas R.; Cowan, Clark; Robertson, James R.

    2014-01-01

    Santa Cruz Island is the largest of the California Channel Islands and supports a diverse and unique flora which includes 9 federally listed species. Sheep, cattle, and pigs, introduced to the island in the mid-1800s, disturbed the soil, browsed native vegetation, and facilitated the spread of exotic invasive plants. Recent removal of introduced herbivores on the island led to the release of invasive fennel (Foeniculum vulgare), which expanded to become the dominant vegetation in some areas and has impeded the recovery of some native plant communities. In 2007, Channel Islands National Park initiated a program to control fennel using triclopyr on the eastern 10% of the island. We established replicate paired plots (seeded and nonseeded) at Scorpion Anchorage and Smugglers Cove, where notably dense fennel infestations (>10% cover) occurred, to evaluate the effectiveness of native seed augmentation following fennel removal. Five years after fennel removal, vegetative cover increased as litter and bare ground cover decreased significantly (P species increased at Scorpion Anchorage in both seeded and nonseeded plots. At Smugglers Cove, exotic cover decreased significantly (P = 0.0001) as native cover comprised of Eriogonum arborescensand Leptosyne gigantea increased significantly (P < 0.0001) in seeded plots only. Nonseeded plots at Smugglers Cove were dominated by exotic annual grasses, primarily Avena barbata. The data indicate that seeding with appropriate native seed is a critical step in restoration following fennel control in areas where the native seed bank is depauperate.

  14. EUROCONTROL-Systemic Occurrence Analysis Methodology (SOAM)-A 'Reason'-based organisational methodology for analysing incidents and accidents

    International Nuclear Information System (INIS)

    Licu, Tony; Cioran, Florin; Hayward, Brent; Lowe, Andrew

    2007-01-01

    The Safety Occurrence Analysis Methodology (SOAM) developed for EUROCONTROL is an accident investigation methodology based on the Reason Model of organisational accidents. The purpose of a SOAM is to broaden the focus of an investigation from human involvement issues, also known as 'active failures of operational personnel' under Reason's original model, to include analysis of the latent conditions deeper within the organisation that set the context for the event. Such an approach is consistent with the tenets of Just Culture in which people are encouraged to provide full and open information about how incidents occurred, and are not penalised for errors. A truly systemic approach is not simply a means of transferring responsibility for a safety occurrence from front-line employees to senior managers. A consistent philosophy must be applied, where the investigation process seeks to correct deficiencies wherever they may be found, without attempting to apportion blame or liability

  15. Exploring multi-metal biosorption by indigenous metal-hyperresistant Enterobacter sp. J1 using experimental design methodologies

    International Nuclear Information System (INIS)

    Lu, W.-B.; Kao, W.-C.; Shi, J.-J.; Chang, J.-S.

    2008-01-01

    A novel experimental design, combining mixture design and response surface methodology (RSM), was developed to investigate the competitive adsorption behavior of lead, copper and cadmium by an indigenous isolate Enterobacter sp. J1 able to tolerate high concentrations of a variety of heavy metals. Using the proposed combinative experimental design, two different experiment designs in a ternary metal biosorption system can be integrated to a succinct experiment and the number of experimental trials was markedly reduced from 38 to 26 by reusing the mutual experimental data. Triangular contour diagrams and triangular three-dimensional surface plots were generated to describe the ternary metal biosorption equilibrium data in mixture design systems. The results show that the preference of metal sorption of Enterobacter sp. J1 decreased in the order of Pb 2+ > Cu 2+ > Cd 2+ . The presence of other metals resulted in a competitive effect. The influence of the other two metals in ternary metal biosorption system can be easily determined by comparing the stray distance from the single metal biosorption. The behavior of competitive biosorption was successfully described and predicted using a combined Langmuir-Freundlich model along with new three-dimensional contour-surface plots

  16. Exploring multi-metal biosorption by indigenous metal-hyperresistant Enterobacter sp. J1 using experimental design methodologies

    Energy Technology Data Exchange (ETDEWEB)

    Lu, W.-B. [Department of Cosmetic Science, Chung Hwa University of Medical Technology, Tainan, Taiwan (China); Kao, W.-C.; Shi, J.-J. [Department of Chemical Engineering, National Cheng Kung University, Tainan, Taiwan (China); Chang, J.-S. [Department of Chemical Engineering, National Cheng Kung University, Tainan, Taiwan (China)], E-mail: changjs@mail.ncku.edu.tw

    2008-05-01

    A novel experimental design, combining mixture design and response surface methodology (RSM), was developed to investigate the competitive adsorption behavior of lead, copper and cadmium by an indigenous isolate Enterobacter sp. J1 able to tolerate high concentrations of a variety of heavy metals. Using the proposed combinative experimental design, two different experiment designs in a ternary metal biosorption system can be integrated to a succinct experiment and the number of experimental trials was markedly reduced from 38 to 26 by reusing the mutual experimental data. Triangular contour diagrams and triangular three-dimensional surface plots were generated to describe the ternary metal biosorption equilibrium data in mixture design systems. The results show that the preference of metal sorption of Enterobacter sp. J1 decreased in the order of Pb{sup 2+} > Cu{sup 2+} > Cd{sup 2+}. The presence of other metals resulted in a competitive effect. The influence of the other two metals in ternary metal biosorption system can be easily determined by comparing the stray distance from the single metal biosorption. The behavior of competitive biosorption was successfully described and predicted using a combined Langmuir-Freundlich model along with new three-dimensional contour-surface plots.

  17. Predicting plot soil loss by empirical and process-oriented approaches: A review

    Science.gov (United States)

    Soil erosion directly affects the quality of the soil, its agricultural productivity and its biological diversity. Many mathematical models have been developed to estimate plot soil erosion at different temporal scales. At present, empirical soil loss equations and process-oriented models are consid...

  18. Rain concentration and sheltering effect of solar panels on cultivated plots

    Science.gov (United States)

    Elamri, Yassin; Cheviron, Bruno; Mange, Annabelle; Dejean, Cyril; Liron, François; Belaud, Gilles

    2018-02-01

    Agrivoltaism is the association of agricultural and photovoltaic energy production on the same land area, coping with the increasing pressure on land use and water resources while delivering clean and renewable energy. However, the solar panels located above the cultivated plots also have a seemingly yes unexplored effect on rain redistribution, sheltering large parts of the plot but redirecting concentrated fluxes on a few locations. The spatial heterogeneity in water amounts observed on the ground is high in the general case; its dynamical patterns are directly attributable to the mobile panels through their geometrical characteristics (dimensions, height, coverage percentage) and the strategies selected to rotate them around their support tube. A coefficient of variation is used to measure this spatial heterogeneity and to compare it with the coefficient of uniformity that classically describes the efficiency of irrigation systems. A rain redistribution model (AVrain) was derived from literature elements and theoretical grounds and then validated from experiments in both field and controlled conditions. AVrain simulates the effective rain amounts on the plot from a few forcing data (rainfall, wind velocity and direction) and thus allows real-time strategies that consist in operating the panels so as to limit the rain interception mainly responsible for the spatial heterogeneities. Such avoidance strategies resulted in a sharp decrease in the coefficient of variation, e.g. 0.22 vs. 2.13 for panels held flat during one of the monitored rain events, which is a fairly good uniformity score for irrigation specialists. Finally, the water amounts predicted by AVrain were used as inputs to Hydrus-2D for a brief exploratory study on the impact of the presence of solar panels on rain redistribution at shallow depths within soils: similar, more diffuse patterns were simulated and were coherent with field measurements.

  19. Accelerated technique for plotting of cyclic strain diagrams at different temperatures

    International Nuclear Information System (INIS)

    Varyanitsa, V.Yu.; Egorov, V.I.; Sobolev, N.D.

    1982-01-01

    A method for plotting curves of strain by testing one specimen at different temperatures levels is proposed. It is shown that under considered conditions of the test of prehistory of the temperature interaction does not effect the process of cyclic deformation. It confirms a possibility of steel tests at one specimen at different regimes [ru

  20. Accelerated technique for plotting of cyclic strain diagrams at different temperatures

    Energy Technology Data Exchange (ETDEWEB)

    Varyanitsa, V Yu; Egorov, V I; Sobolev, N D [Moskovskij Inzhenerno-Fizicheskij Inst. (USSR)

    1982-01-01

    A method for plotting curves of strain by testing one specimen at different temperatures levels is proposed. It is shown that under considered conditions of the test of prehistory of the temperature interaction does not effect the process of cyclic deformation. It confirms a possibility of steel tests at one specimen at different regimes.