WorldWideScience

Sample records for methodology biomed central

  1. Biomes.

    Science.gov (United States)

    Web Feet K-8, 2001

    2001-01-01

    This annotated subject guide to Web sites and additional resources focuses on biomes. Specifies age levels for resources that include Web sites, CD-ROMs and software, videos, books, audios, and magazines; includes professional resources; and presents a relevant class activity. (LRW)

  2. Toward Understanding Dynamics in Shifting Biomes: An Individual Based Modeling Approach to Characterizing Drought and Mortality in Central Western Canada

    Science.gov (United States)

    Armstrong, A. H.; Foster, A.; Rogers, B. M.; Hogg, T.; Michaelian, M.; Shuman, J. K.; Shugart, H. H., Jr.; Goetz, S. J.

    2017-12-01

    The Arctic-Boreal zone is known be warming at an accelerated rate relative to other biomes. Persistent warming has already affected the high northern latitudes, altering vegetation productivity, carbon sequestration, and many other ecosystem processes and services. The central-western Canadian boreal forests and aspen parkland are experiencing a decade long drought, and rainfall has been identified as a key factor controlling the location of the boundary between forest and prairie in this region. Shifting biome with related greening and browning trends are readily measureable with remote sensing, but the dynamics that create and result from them are not well understood. In this study, we use the University of Virginia Forest Model Enhanced (UVAFME), an individual-based forest model, to simulate the changes that are occurring across the southern boreal and parkland forests of west-central Canada. We present a parameterization of UVAFME for western central Canadian forests, validated with CIPHA data (Climate Change Impacts on the Productivity and Health of Aspen), and improved mortality. In order to gain a fine-scale understanding of how climate change and specifically drought will continue to affect the forests of this region, we simulated forest conditions following CMIP5 climate scenarios. UVAFME predictions were compared with statistical models and satellite observations of productivity across the landscape. Changes in forest cover, forest type, aboveground biomass, and mortality and recruitment dynamics are presented, highlighting the high vulnerability of this region to vegetation transitions associated with future droughts.

  3. Aquatic ecosystem responses to Holocene climate change and biome development in boreal, central Asia

    Science.gov (United States)

    Mackay, Anson W.; Bezrukova, Elena V.; Leng, Melanie J.; Meaney, Miriam; Nunes, Ana; Piotrowska, Natalia; Self, Angela; Shchetnikov, Alexander; Shilland, Ewan; Tarasov, Pavel; Wang, Luo; White, Dustin

    2012-05-01

    Boreal ecosystems are highly vulnerable to climate change, and severe ecological impacts in the near future are virtually certain to occur. We undertook a multiproxy study on an alpine lake (ESM-1) at the modern tree-line in boreal, southern Siberia. Steppe and tundra biomes were extensive in eastern Sayan landscapes during the early Holocene. Boreal forest quickly expanded by 9.1 ka BP, and dominated the landscape until c 0.7 ka BP, when the greatest period of compositional turnover occurred. At this time, alpine meadow landscape expanded and Picea obovata colonised new habitats along river valleys and lake shorelines, because of prevailing cool, moist conditions. During the early Holocene, chironomid assemblages were dominated by cold stenotherms. Diatoms for much of the Holocene were dominated by alkaliphilous, fragilarioid taxa, up until 0.2 ka BP, when epiphytic species expanded, indicative of increased habitat availability. C/N mass ratios ranged between 9.5 and 13.5 (11.1-15.8 C/N atomic ratios), indicative of algal communities dominating organic matter contributions to bottom sediments with small, persistent contributions from vascular plants. However, δ13C values increased steadily from -34.9‰ during the early Holocene (9.3 ka BP) to -24.8‰ by 0.6 ka BP. This large shift in magnitude may be due to a number of factors, including increasing within-lake productivity, increasing disequilibrium between the isotopic balance of the lake with the atmosphere as the lake became isotopically ‘mature’, and declining soil respiration linked to small, but distinct retreat in forest biomes. The influence of climatic variables on landscape vegetation was assessed using redundancy analysis (RDA), a linear, direct ordination technique. Changes in July insolation at 60 °N significantly explained over one-fifth of the variation in species composition, while changes in estimates of northern hemisphere temperature and ice-rafted debris events in the North Atlantic

  4. I. DEVELOPMENTAL METHODOLOGY AS A CENTRAL SUBDISCIPLINE OF DEVELOPMENTAL SCIENCE.

    Science.gov (United States)

    Card, Noel A

    2017-06-01

    This first chapter introduces the main goals of the monograph and previews the remaining chapters. The goals of this monograph are to provide summaries of our current understanding of advanced developmental methodologies, provide information that can advance our understanding of human development, identify shortcomings in our understanding of developmental methodology, and serve as a flagpost for organizing developmental methodology as a subdiscipline within the broader field of developmental science. The remaining chapters in this monograph address issues in design (sampling and big data), longitudinal data analysis, and issues of replication and research accumulation. The final chapter describes the history of developmental methodology, considers how the previous chapters in this monograph fit within this subdiscipline, and offers recommendations for further advancement. © 2017 The Society for Research in Child Development, Inc.

  5. User's Guide to Biome Information from the United States International Biological Program (IBP). First Edition.

    Science.gov (United States)

    Hinckley, A. Dexter; Haug, Peter T.

    This publication is a guide to the biome research conducted under the International Biological Program. The guide lists biome researchers by interest and by biome as well as a central list. A site list, map, information sources section reporting abstracts, bibliographies, journals, books, evaluations, and data books are also included. Three…

  6. Exploring the Central Nervous System: methodological state of the art

    International Nuclear Information System (INIS)

    Darcourt, Jacques; Koulibaly, Pierre-Malick; Migneco, Octave

    2005-01-01

    The analysis of the clinical use of brain SPECT demonstrate a defacing between the methodological developments published recently and its current use in clinical practice. We review a description of recent methodological developments that could be useful in three classical clinical application: the diagnosis of Alzheimer's disease, the evaluation of dopaminergic neurotransmission in Parkinson's Disease and the study of epilepsy. In Alzheimer's disease the methods of spatial standardization and the comparison to a normative data base are more useful to observers that have the least experience and for this end methodological approaches that are oriented to routine work better and are simpler than SPM. Quantification is essential in the study of dopaminergic neurotransmission and the measurement of binding potential appears biased due to septal penetration, attenuation, diffusion and partial volume effect. Partial volume effect introduces most error and its correction is difficult because of the co registration precision required with magnetic resonance images. The study of epilepsy by subtraction of ictal and interictal SPECT has demonstrated its clinical value. It is a fusion of images operation that has now very well defined methods (au)

  7. Consequences of biome depletion

    International Nuclear Information System (INIS)

    Salvucci, Emiliano

    2013-01-01

    The human microbiome is an integral part of the superorganism together with their host and they have co-evolved since the early days of the existence of the human species. The modification of the microbiome as a result changes in food and social habits of human beings throughout their life history has led to the emergence of many diseases. In contrast with the Darwinian view of nature of selfishness and competence, new holistic approaches are rising. Under these views, the reconstitution of the microbiome comes out as a fundamental therapy for emerging diseases related to biome depletion.

  8. Disturbance maintains alternative biome states.

    Science.gov (United States)

    Dantas, Vinícius de L; Hirota, Marina; Oliveira, Rafael S; Pausas, Juli G

    2016-01-01

    Understanding the mechanisms controlling the distribution of biomes remains a challenge. Although tropical biome distribution has traditionally been explained by climate and soil, contrasting vegetation types often occur as mosaics with sharp boundaries under very similar environmental conditions. While evidence suggests that these biomes are alternative states, empirical broad-scale support to this hypothesis is still lacking. Using community-level field data and a novel resource-niche overlap approach, we show that, for a wide range of environmental conditions, fire feedbacks maintain savannas and forests as alternative biome states in both the Neotropics and the Afrotropics. In addition, wooded grasslands and savannas occurred as alternative grassy states in the Afrotropics, depending on the relative importance of fire and herbivory feedbacks. These results are consistent with landscape scale evidence and suggest that disturbance is a general factor driving and maintaining alternative biome states and vegetation mosaics in the tropics. © 2015 John Wiley & Sons Ltd/CNRS.

  9. Evolution of the indoor biome.

    Science.gov (United States)

    Martin, Laura J; Adams, Rachel I; Bateman, Ashley; Bik, Holly M; Hawks, John; Hird, Sarah M; Hughes, David; Kembel, Steven W; Kinney, Kerry; Kolokotronis, Sergios-Orestis; Levy, Gabriel; McClain, Craig; Meadow, James F; Medina, Raul F; Mhuireach, Gwynne; Moreau, Corrie S; Munshi-South, Jason; Nichols, Lauren M; Palmer, Clare; Popova, Laura; Schal, Coby; Täubel, Martin; Trautwein, Michelle; Ugalde, Juan A; Dunn, Robert R

    2015-04-01

    Few biologists have studied the evolutionary processes at work in indoor environments. Yet indoor environments comprise approximately 0.5% of ice-free land area--an area as large as the subtropical coniferous forest biome. Here we review the emerging subfield of 'indoor biome' studies. After defining the indoor biome and tracing its deep history, we discuss some of its evolutionary dimensions. We restrict our examples to the species found in human houses--a subset of the environments constituting the indoor biome--and offer preliminary hypotheses to advance the study of indoor evolution. Studies of the indoor biome are situated at the intersection of evolutionary ecology, anthropology, architecture, and human ecology and are well suited for citizen science projects, public outreach, and large-scale international collaborations. Copyright © 2015 Elsevier Ltd. All rights reserved.

  10. Biomes computed from simulated climatologies

    Energy Technology Data Exchange (ETDEWEB)

    Claussen, M.; Esch, M. [Max-Planck-Institut fuer Meteorologie, Hamburg (Germany)

    1994-01-01

    The biome model of Prentice et al. is used to predict global patterns of potential natural plant formations, or biomes, from climatologies simulated by ECHAM, a model used for climate simulations at the Max-Planck-Institut fuer Meteorologie. This study undertaken in order to show the advantage of this biome model in diagnosing the performance of a climate model and assessing effects of past and future climate changes predicted by a climate model. Good overall agreement is found between global patterns of biomes computed from observed and simulated data of present climate. But there are also major discrepancies indicated by a difference in biomes in Australia, in the Kalahari Desert, and in the Middle West of North America. These discrepancies can be traced back to in simulated rainfall as well as summer or winter temperatures. Global patterns of biomes computed from an ice age simulation reveal that North America, Europe, and Siberia should have been covered largely by tundra and taiga, whereas only small differences are for the tropical rain forests. A potential northeast shift of biomes is expected from a simulation with enhanced CO{sub 2} concentration according to the IPCC Scenario A. Little change is seen in the tropical rain forest and the Sahara. Since the biome model used is not capable of predicting chances in vegetation patterns due to a rapid climate change, the latter simulation to be taken as a prediction of chances in conditions favourable for the existence of certain biomes, not as a reduction of a future distribution of biomes. 15 refs., 8 figs., 2 tabs.

  11. Biomes computed from simulated climatologies

    Energy Technology Data Exchange (ETDEWEB)

    Claussen, W.; Esch, M.

    1992-09-01

    The biome model of Prentice et al. is used to predict global patterns of potential natural plant formations, or biomes, from climatologies simulated by ECHAM, a model used for climate simulations at the Max-Planck-Institut fuer Meteorologie. This study is undertaken in order to show the advantage of this biome model in comprehensively diagnosing the performance of a climate model and assessing effects of past and future climate changes predicted by a climate model. Good overall agreement is found between global patterns of biomes computed from observed and simulated data of present climate. But there are also major discrepancies indicated by a difference in biomes in Australia, in the Kalahari Desert, and in the Middle West of North America. These discrepancies can be traced back to failures in simulated rain fall as well as summer or winter temperatures. Global patterns of biomes computed from an ice age simulation reveal that North America, Europe, and Siberia should have been covered largely by tundra and taiga, whereas only small differences are seen for the tropical rain forests. A potential North-East shift of biomes is expected from a simulation with enhanced CO{sub 2} concentration according to the IPCC Scenario A. Little change is seen in the tropical rain forest and the Sahara. Since the biome model used is not capable of predicting changes in vegetation patterns due to a rapid climate change, the latter simulation has to be taken as a prediction of changes in conditions favorable for the existence of certain biomes, not as a prediction of a future distribution of biomes. (orig.).

  12. The Methodology of Doppler-Derived Central Blood Flow Measurements in Newborn Infants

    Directory of Open Access Journals (Sweden)

    Koert A. de Waal

    2012-01-01

    Full Text Available Central blood flow (CBF measurements are measurements in and around the heart. It incorporates cardiac output, but also measurements of cardiac input and assessment of intra- and extracardiac shunts. CBF can be measured in the central circulation as right or left ventricular output (RVO or LVO and/or as cardiac input measured at the superior vena cava (SVC flow. Assessment of shunts incorporates evaluation of the ductus arteriosus and the foramen ovale. This paper describes the methodology of CBF measurements in newborn infants. It provides a brief overview of the evolution of Doppler ultrasound blood flow measurements, basic principles of Doppler ultrasound, and an overview of all used methodology in the literature. A general guide for interpretation and normal values with suggested cutoffs of CBFs are provided for clinical use.

  13. Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years

    Science.gov (United States)

    Marchant, R.; Harrison, S.P.; Hooghiemstra, H.; Markgraf, Vera; Van Boxel, J. H.; Ager, T.; Almeida, L.; Anderson, R.; Baied, C.; Behling, H.; Berrio, J.C.; Burbridge, R.; Bjorck, S.; Byrne, R.; Bush, M.B.; Cleef, A.M.; Duivenvoorden, J.F.; Flenley, J.R.; De Oliveira, P.; Van Geel, B.; Graf, K.J.; Gosling, W.D.; Harbele, S.; Van Der Hammen, T.; Hansen, B.C.S.; Horn, S.P.; Islebe, G.A.; Kuhry, P.; Ledru, M.-P.; Mayle, F.E.; Leyden, B.W.; Lozano-Garcia, S.; Melief, A.B.M.; Moreno, P.; Moar, N.T.; Prieto, A.; Van Reenen, G. B.; Salgado-Labouriau, M. L.; Schasignbitz, F.; Schreve-Brinkman, E. J.; Wille, M.

    2009-01-01

    The biomisation method is used to reconstruct Latin American vegetation at 6000±500 and 18 000±1000 radiocarbon years before present (14C yr BP) from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation. At 6000±500 14C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000±500 14C yr BP reconstruction are comparatively small. Patterns of change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America also show a change in biome assignment to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucat??n peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded. At 18 000±1000 14C yr BP 61 samples from 34 sites record vegetation that reflects a generally cool and dry environment. Cool grass/shrubland prevalent in southeast Brazil, Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America is dominated by cool grass/shrubland, a single site retains cool temperate

  14. Modelling insights on the partition of evapotranspiration components across biomes

    Science.gov (United States)

    Fatichi, Simone; Pappas, Christoforos

    2017-04-01

    Recent studies using various methodologies have found a large variability (from 35 to 90%) in the ratio of transpiration to total evapotranspiration (denoted as T:ET) across biomes or even at the global scale. Concurrently, previous results suggest that T:ET is independent of mean precipitation and has a positive correlation with Leaf Area Index (LAI). We used the mechanistic ecohydrological model, T&C, with a refined process-based description of soil resistance and a detailed treatment of canopy biophysics and ecophysiology, to investigate T:ET across multiple biomes. Contrary to observation-based estimates, simulation results highlight a well-constrained range of mean T:ET across biomes that is also robust to perturbations of the most sensitive parameters. Simulated T:ET was confirmed to be independent of average precipitation, while it was found to be uncorrelated with LAI across biomes. Higher values of LAI increase evaporation from interception but suppress ground evaporation with the two effects largely cancelling each other in many sites. These results offer mechanistic, model-based, evidence to the ongoing research about the range of T:ET and the factors affecting its magnitude across biomes.

  15. Description of the Karoo Biome project

    CSIR Research Space (South Africa)

    Cowling, RM

    1986-01-01

    Full Text Available The ecological characteristics and ecological problems of the karoo biome are briefly described. A conceptual basis and guidelines for the development of the Karoo Biome Project are outlined by addressing project goals, project structure...

  16. Description of the Grassland Biome Project

    CSIR Research Space (South Africa)

    Mentis, MT

    1982-10-01

    Full Text Available The objectives, organization and research programme of the Grassland Biome Project are described against a background of the biome's ecological characteristics and environmental problems. Four principal research topics wil 1 be focused upon: (i...

  17. A comparison of methodological guides for creating microregional strategies of Central European rural areas. Case study: Czech Republic

    Directory of Open Access Journals (Sweden)

    Jakub Trojan

    2012-05-01

    Full Text Available This paper discusses the complementarity of methodological guides dealing with microregional development in Central Europe. As an example, the Czech Republic framework has been selected. This study compares seven common methodologies written in Czech, which the author has divided into three groups, namely manual-like methodologies, semi-scientific texts and hybrid texts dealing with other complementary aspects. The result is a comparison of methodologies, their usage and implications for the practices of regional development. The paper also includes a brief analysis of sustainable development elements incorporated into the methodological texts. The final part outlines links to the four-capital model of regional development.

  18. Identification of biomes affected by marginal expansion of agricultural land use induced by increased crop consumption

    DEFF Research Database (Denmark)

    Kløverpris, Jesper Hedal

    2009-01-01

    to characterise these areas. The present study ascribes so-called biomes (natural potential vegetation) to the areas affected by agricultural expansion in order to provide a basis for assessing the environmental impacts from land use in the life cycle impact assessment (LCIA). The methodology builds...... on agricultural statistics and maps of global agricultural areas and the global distribution of biomes. The application of the method is illustrated with four examples. The results indicate that agricultural expansion on land suited for crop cultivation (cultivable land) typically affects forest biomes...... or potential grassland/steppe, whereas expansion on land suited for grazing but not for crop cultivation (grazable land) typically occurs on potential shrubland or a few other biomes depending on the region. Some uncertainty applies to the results but it is concluded that it is feasible to identify biomes...

  19. Biosphere 2's Marsh Biome

    Science.gov (United States)

    Molnar, Jennifer; Goodridge, Kelven

    1997-01-01

    The Marsh Biome, which was modeled after the mangroves and marshes of southwest Florida, has an area of 441.2 sq m separated into three hydrologically independent sections: the Freshwater, Oligohaline and Salt Marshes. The divisions are made based on their salinity (approximately 0, 4, and 34 ppt. respectively), but they also contain different biological communities. The Freshwater and Oligohaline Marshes are mostly filled with various grasses and several trees, while the Salt Marsh houses regions of red, black, and white mangroves (Rhizophora mangle, Avicennia germinans, and Languncularia racemosa respectively). Overall, there are an estimated 80 species of plants within the biome. Water in the Salt Marsh follows a meandering stream from the algal turf scrubbers (apparatuses that clean the water of its nutrients and heavy metals while increasing dissolved oxygen levels) which have an outlet in the Salt Marsh section near sites 4 and 5 to the Fringing Red Mangrove section. The sections of the Salt Marsh are separated by walls of concrete with openings to allow the stream to flow through. Throughout this study, conducted through the months of June and July, many conditions within the biome remained fairly constant. The temperature was within a degree or two of 25 C, mostly depending on whether the sample site was in direct sunlight or shaded. The pH throughout the Salt Marsh was 8.0 +/- 0.2, and the lower salinity waters only dropped below this soon after rains. The water rdepth and dissolved oxygen varied, however, between sites.

  20. Multiple nutrient stresses at intersecting Pacific Ocean biomes detected by protein biomarkers.

    Science.gov (United States)

    Saito, Mak A; McIlvin, Matthew R; Moran, Dawn M; Goepfert, Tyler J; DiTullio, Giacomo R; Post, Anton F; Lamborg, Carl H

    2014-09-05

    Marine primary productivity is strongly influenced by the scarcity of required nutrients, yet our understanding of these nutrient limitations is informed by experimental observations with sparse geographical coverage and methodological limitations. We developed a quantitative proteomic method to directly assess nutrient stress in high-light ecotypes of the abundant cyanobacterium Prochlorococcus across a meridional transect in the central Pacific Ocean. Multiple peptide biomarkers detected widespread and overlapping regions of nutritional stress for nitrogen and phosphorus in the North Pacific Subtropical Gyre and iron in the equatorial Pacific. Quantitative protein analyses demonstrated simultaneous stress for these nutrients at biome interfaces. This application of proteomic biomarkers to diagnose ocean metabolism demonstrated Prochlorococcus actively and simultaneously deploying multiple biochemical strategies for low-nutrient conditions in the oceans. Copyright © 2014, American Association for the Advancement of Science.

  1. Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years ago

    Science.gov (United States)

    Marchant, R.; Cleef, A.; Harrison, S.P.; Hooghiemstra, H.; Markgraf, Vera; Van Boxel, J.; Ager, T.; Almeida, L.; Anderson, R.; Baied, C.; Behling, H.; Berrio, J.C.; Burbridge, R.; Bjorck, S.; Byrne, R.; Bush, M.; Duivenvoorden, J.; Flenley, J.; De Oliveira, P.; Van Gee, B.; Graf, K.; Gosling, W.D.; Harbele, S.; Van Der Hammen, T.; Hansen, B.; Horn, S.; Kuhry, P.; Ledru, M.-P.; Mayle, F.; Leyden, B.; Lozano-Garcia, S.; Melief, A.M.; Moreno, P.; Moar, N.T.; Prieto, A.; Van Reenen, G.; Salgado-Labouriau, M.; Schabitz, F.; Schreve-Brinkman, E. J.; Wille, M.

    2009-01-01

    The biomisation method is used to reconstruct Latin American vegetation at 6000??500 and 18 000??1000 radiocarbon years before present ( 14C yr BP) from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation. At 6000??500 14C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000??500 14C yr BP reconstruction are comparatively small; change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America show a change in biome assignment, but to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucat??n peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded. At 18 000??1000 14C yr BP 61 samples from 34 sites record vegetation reflecting a generally cool and dry environment. Cool grass/shrubland is prevalent in southeast Brazil whereas Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America is dominated by cool grass/shrubland, a single site retains cool temperate rain

  2. Plant biodiversity of beech forests in central-northern Italy: a methodological approach for conservation purposes

    Directory of Open Access Journals (Sweden)

    Marcantonio M

    2012-07-01

    Full Text Available Forests are reckoned essentials as biodiversity reservoirs and carbon sinks. Current threats to forest ecosystems (e.g., climate changes, habitat loss and fragmentation, management changes call for monitoring their biodiversity and preserving their ecological functions. In this study, we characterized plants diversity of five beech forests located in central and north Apennines mountain chain, using results by a probabilistic sampling. In order to achieve our goals, we have considered species richness and abundance, taxonomic distinctness and species composition, using both old and new analytical approaches. Results have shown how: (1 the forest type dominated by Fagus sylvatica is characterized by high complexity, with marked compositional, structural and biodiversity differences; (2 beech forests of Pigelleto di Piancastagnaio and Valle della Corte show the highest plants diversity values. The ecological characteristics of these areas, which sustain high diversity values, are unique and of great conservation interest; (3 the use of species richness as the only diversity measure have not allowed an efficient differentiation between studied areas. Indeed, the use of different indexes and analytical methods is required to detect multiple characteristics of biological diversity, as well as to carry out efficient biodiversity surveys aimed to develop optimal conservation strategies. In the future, we plan to apply the sampling methodology and the analytical approach used in this paper to characterize plants diversity of similar forest types.

  3. Methodological aspects in quantitative translational neuroimaging in central nervous system diseases with Positron Emission Tomography

    International Nuclear Information System (INIS)

    Müllauer, J.

    2013-01-01

    Patients suffering from central nervous system (CNS) diseases crucially depend on a sufficient supply with CNS active drugs that help them to control and endure their illness. As the site of action of CNS drugs is in the brain, these substances need to pass the blood-brain barrier (BBB), a physiological barrier seperating the blood circulation and the brain. However, CNS drug treatment is often accompanied by pharmacoresistance (drug resistance). Multidrug transporters, such as permeable glycoprotein (Pgp) are responsible for a gradient dependent transport of substances over the BBB. Drug resistance is hypothesised as a result of overactivity of multidrug transporters at the BBB, with the result of insufficient and poor CNS drug levels in the brain. In the case of epilepsy in up to 20 - 40% of patients drug resistance is observed. The influence of Ppg overexpression on drug resistance in epilepsy was studied using positron emission tomography (PET), a novel non-invasive nuclear imaging method, together with radioligands that interact with Pgp. Radiolabeled Pgp-substrates ((R)-[11C]verapamil), and inhibitors ([11C]elacridar and [11C]tariquidar) were developed and used to study the influence of Pgp and other transporters at the BBB in a translational research approach; in animal models of epilepsy and in humans. The aim in translational PET research is a direct comparision of gathered animal and human data. Consequently diverse methodological challenges arise, that need to be addressed and observed in order to enable a translation between species. To achieve full quantification of the function and density of drug transporters at the BBB in both, humans and rodents, kinetic modeling (compartmental modeling) was applied to the PET pharmacokinetic data. Estimated modeling parameters were in succession used to estimate biological and physiological processes of Pgp at the BBB. Subsequently, nonlinear mixed effects modeling was deployed to increase the mechanistic

  4. Phylogenetic biome conservatism on a global scale.

    Science.gov (United States)

    Crisp, Michael D; Arroyo, Mary T K; Cook, Lyn G; Gandolfo, Maria A; Jordan, Gregory J; McGlone, Matt S; Weston, Peter H; Westoby, Mark; Wilf, Peter; Linder, H Peter

    2009-04-09

    How and why organisms are distributed as they are has long intrigued evolutionary biologists. The tendency for species to retain their ancestral ecology has been demonstrated in distributions on local and regional scales, but the extent of ecological conservatism over tens of millions of years and across continents has not been assessed. Here we show that biome stasis at speciation has outweighed biome shifts by a ratio of more than 25:1, by inferring ancestral biomes for an ecologically diverse sample of more than 11,000 plant species from around the Southern Hemisphere. Stasis was also prevalent in transocean colonizations. Availability of a suitable biome could have substantially influenced which lineages establish on more than one landmass, in addition to the influence of the rarity of the dispersal events themselves. Conversely, the taxonomic composition of biomes has probably been strongly influenced by the rarity of species' transitions between biomes. This study has implications for the future because if clades have inherently limited capacity to shift biomes, then their evolutionary potential could be strongly compromised by biome contraction as climate changes.

  5. Constrained variability of modeled T:ET ratio across biomes

    Science.gov (United States)

    Fatichi, Simone; Pappas, Christoforos

    2017-07-01

    A large variability (35-90%) in the ratio of transpiration to total evapotranspiration (referred here as T:ET) across biomes or even at the global scale has been documented by a number of studies carried out with different methodologies. Previous empirical results also suggest that T:ET does not covary with mean precipitation and has a positive dependence on leaf area index (LAI). Here we use a mechanistic ecohydrological model, with a refined process-based description of evaporation from the soil surface, to investigate the variability of T:ET across biomes. Numerical results reveal a more constrained range and higher mean of T:ET (70 ± 9%, mean ± standard deviation) when compared to observation-based estimates. T:ET is confirmed to be independent from mean precipitation, while it is found to be correlated with LAI seasonally but uncorrelated across multiple sites. Larger LAI increases evaporation from interception but diminishes ground evaporation with the two effects largely compensating each other. These results offer mechanistic model-based evidence to the ongoing research about the patterns of T:ET and the factors influencing its magnitude across biomes.

  6. Shift of biome patterns due to simulated climate variability and climate change

    International Nuclear Information System (INIS)

    Claussen, M.

    1993-01-01

    The variability of simulated equilibrium-response patterns of biomes caused by simulated climate variability and climate shift is analysed. This investigation is based on various realisations of simulated present-day climate and climate shift. It has been found that the difference between biomes computed from three 10-year climatologies and from the corresponding 30-year climatology, simulated by the Hamburg climate model at T21 resolution, amounts to approximately 6% of the total land area, Antarctica excluded. This difference is mainly due to differences in annual moisture availability and winter temperatures. When intercomparing biomes from the 10-year climatologies a 10% difference is seen, but there is no unique difference pattern. In contrast to the interdecadal variability, the shift of conditions favorable for biomes due to a shift in climate in the next 100 years, caused by an increase in sea-surface temperatures and atmospheric CO 2 , reveals a unique trend pattern. It turns out that the strongest and most significant signal is the north-east shift of conditions for boreal biomes. This signal is caused by an increase of annual temperature sums as well as mean temperatures of the coldest and warmest months. Trends in annual moisture availability are of secondary importance globally. Regionally, a decrease in water availability affects biomes in Central and East Europe and an increase of water availability leads to a potential increase in tropical rain forest. In total, all differences amount to roughly 30% of the total land surface, Antarctica excluded. (orig./KW)

  7. Description of the Fynbos Biome Project

    CSIR Research Space (South Africa)

    Kruger, FJ

    1978-06-01

    Full Text Available The objectives, organization and research programme of the Fynbos Biome Project being undertaken in the south-west and southern Cape are described. The project is a cooperative multi-disciplinary study of the ecological characteristics, structure...

  8. Thresholds for boreal biome transitions.

    Science.gov (United States)

    Scheffer, Marten; Hirota, Marina; Holmgren, Milena; Van Nes, Egbert H; Chapin, F Stuart

    2012-12-26

    Although the boreal region is warming twice as fast as the global average, the way in which the vast boreal forests and tundras may respond is poorly understood. Using satellite data, we reveal marked alternative modes in the frequency distributions of boreal tree cover. At the northern end and at the dry continental southern extremes, treeless tundra and steppe, respectively, are the only possible states. However, over a broad intermediate temperature range, these treeless states coexist with boreal forest (∼75% tree cover) and with two more open woodland states (∼20% and ∼45% tree cover). Intermediate tree covers (e.g., ∼10%, ∼30%, and ∼60% tree cover) between these distinct states are relatively rare, suggesting that they may represent unstable states where the system dwells only transiently. Mechanisms for such instabilities remain to be unraveled, but our results have important implications for the anticipated response of these ecosystems to climatic change. The data reveal that boreal forest shows no gradual decline in tree cover toward its limits. Instead, our analysis suggests that it becomes less resilient in the sense that it may more easily shift into a sparse woodland or treeless state. Similarly, the relative scarcity of the intermediate ∼10% tree cover suggests that tundra may shift relatively abruptly to a more abundant tree cover. If our inferences are correct, climate change may invoke massive nonlinear shifts in boreal biomes.

  9. Methodology for transient simulation of a small heliothermic central station; Metodologia para simulacao transiente de uma pequena central heliotermica

    Energy Technology Data Exchange (ETDEWEB)

    Wendel, Marcelo

    2010-08-15

    The final steps of generating electricity from concentrated solar power technologies are similar to conventional thermal processes, since steam or gas is also employed for moving turbines or pistons. The fundamental difference lies on the fact that steam or hot gas is generated by solar radiation instead of fossil fuels or nuclear heat. The cheapest electricity generated from solar energy has been achieved with large-scale power stations based on this concept. Computer simulations represent a low-cost option for the design of thermal systems. The present study aims to develop a methodology for the transient simulation of a micro-scale solar-thermal power plant (120 kWe) which should be appropriate in terms of accuracy and computational effort. The facility considered can optionally operate as a cogeneration plant producing electric power as well as chilled water. Solar radiation is collected by parabolic troughs, electricity is generated by an organic Rankine cycle and chilled water is produced by an absorption cooling cycle. The organic Rankine cycle is of interest because it allows for a plant with relatively simple structure and automated operation. The simulation methodology proposed in this study is implemented in TRNSYS with new components (TYPEs) developed for the solar field and thermal cycles. The parabolic trough field component is based on an experimental efficiency curve of the solar collector. In the case of the Rankine and absorption cycles, the components are based on performance polynomials generated with EES from detailed thermodynamic models, which are calibrated with performance data from manufacturers. Distinct plant configurations are considered. An optimization algorithm is used for searching the best operating point in each case. Results are presented for the following Brazilian sites: Fortaleza, Petrolina and Bom Jesus da Lapa. The latter offers the highest global plant performance. An analysis about the influence of the thermal storage on

  10. The extent of forest in dryland biomes

    Science.gov (United States)

    Jean-Francois Bastin; Nora Berrahmouni; Alan Grainger; Danae Maniatis; Danilo Mollicone; Rebecca Moore; Chiara Patriarca; Nicolas Picard; Ben Sparrow; Elena Maria Abraham; Kamel Aloui; Ayhan Atesoglu; Fabio Attore; Caglar Bassullu; Adia Bey; Monica Garzuglia; Luis G. GarcÌa-Montero; Nikee Groot; Greg Guerin; Lars Laestadius; Andrew J. Lowe; Bako Mamane; Giulio Marchi; Paul Patterson; Marcelo Rezende; Stefano Ricci; Ignacio Salcedo; Alfonso Sanchez-Paus Diaz; Fred Stolle; Venera Surappaeva; Rene Castro

    2017-01-01

    Dryland biomes cover two-fifths of Earth’s land surface, but their forest area is poorly known. Here, we report an estimate of global forest extent in dryland biomes, based on analyzing more than 210,000 0.5-hectare sample plots through a photo-interpretation approach using large databases of satellite imagery at (i) very high spatial resolution and (ii) very high...

  11. A reconstruction of Colombian biomes derived from modern pollen data along an altitude gradient

    NARCIS (Netherlands)

    Marchant, R.; Berrío, J.C.; Cleef, A.M.; Duivenvoorden, J.; Helmens, K.; Hooghiemstra, H.; Kuhry, P.; Melief, B.; Schreve-Brinkman, E.; Geel, van B.; Reenen, van G.; Hammen, van der T.

    2001-01-01

    Biomes are reconstructed in Colombia from modern (core-top) pollen data derived from 22 sites along an altitudinal gradient (2000–4100 m) that encompasses the tree line. The `biomization' methodology is described in a stepwise manner that details the reconstruction of vegetation along an altitudinal

  12. A reconstruction of Colombian biomes derived from modern pollen data along an altitude gradient.

    NARCIS (Netherlands)

    Marchant, R.A.; Behling, H.; Berrio Mogollon, J.C.; Cleef, A.M.; Duivenvoorden, J.F.; van Geel, B.; van der Hammen, T.; Hooghiemstra, H.; Kuhry, P.; Melief, B.M.; van Reenen, G.B.A.; Wille, M.

    2001-01-01

    Biomes are reconstructed in Colombia from modern (core-top) pollen data derived from twenty-two sites along an altitudinal gradient (2000 to 4100 m) that encompasses the tree line. The 'biomization' methodology is described in a stepwise manner that details the reconstruction of vegetation along an

  13. Himalayan uplift shaped biomes in Miocene temperate Asia: evidence from leguminous Caragana

    Science.gov (United States)

    Ming-Li Zhang; Xiao-Guo Xiang; Juan-Juan Xue; Stewart C. Sanderson; Peter W. Fritsch

    2016-01-01

    Caragana, with distinctive variation in leaf and rachis characters, exhibits three centers of geographic distribution, i.e., Central Asia, the Qinghai-Tibetan Plateau (QTP), and East Asia, corresponding to distinct biomes. Because Caragana species are often ecologically dominant components of the vegetation in these regions, it is regarded as a key taxon for...

  14. Cyclical convergence of Central and Eastern European countries to the Euro area core. New methodological approach

    Directory of Open Access Journals (Sweden)

    Ileana ALEXE

    2013-04-01

    Full Text Available The current paper develops an analysis on the degree of business cycle convergence of the new member states of the EU towards the Euro area core (Germany, France, Italy, Belgium, Netherlands and Luxembourg during 1996 – 2010.Unlike the previous research, the study takes into consideration the similarity of cycles, and not their synchronization. Furthermore, from the methodological point of view, it explores the use of survey indicators in the analysis of the cycles, thus in addition to the traditional approach that employs the GDP. The results obtained through clusterization show that the degree of convergence towards Euro area core remains modest.

  15. Methodology for carrying out energy diagnosis in auxiliaries systems in thermal electrical central stations; Metodologia para realizar un diagnostico energetico en sistemas auxiliares de centrales termoelectricas

    Energy Technology Data Exchange (ETDEWEB)

    Nebradt Garcia, Jesus [Comision Federal de Electricidad (CFE), Mexico, D. F. (Mexico); Rojas Hidalgo, Ismael; Huante Perez, Liborio [Instituto de Investigaciones Electricas, Cuernavaca (Mexico)

    1998-12-31

    One of the potential areas for energy saving in Central Electric Power Plants are the auxiliaries system, so as to based in a preliminary energy diagnosis and considering that energy saving measures would be taken, going from the instrumentation, operational changes in equipment, as well as in using velocity variators in motors, it turns out to be that the energy consumption of auxiliaries at 75% load in a 150 MW thermal power plant varies from 3% to 4% and for the case of a 350 MW power plant the energy consumption of the auxiliaries represents 2 to 3.5%. Nowadays this consumption are above 6%. Considering that the country has 40 units with capacities varying from 150 to 350 MW, the economical and the fuel saving would be substantial. This paper will present a summary of the methodology to be used to carry out this type of projects. [Espanol] Una de las areas potenciales de ahorro de energia en centrales termoelectricas son los sistemas auxiliares, de tal manera que basados en un diagnostico energetico preliminar y considerando que se aplicarian las medidas de ahorro de energia que van desde la instrumentacion, cambios operativos en equipos, asi como el uso de variadores de velocidad en motores, se tienen que los consumos de auxiliares para un 75% de carga en una central termoelectrica de 150 MW varian desde un 3% hasta un 4% y para el caso de una central termoelectrica de 350 MW, el consumo de auxiliares representa del 2 al 3.5%. Hoy en dia dichos consumos estan por encima del 6%. Si consideramos que el pais cuenta con 40 unidades que varian desde 150 MW hasta 350 MW, entonces los ahorros economicos y de combustible serian impactantes. La presente ponencia mostrara un resumen de la metodologia a emplear para la realizacion de este tipo de proyectos.

  16. Methodology for carrying out energy diagnosis in auxiliaries systems in thermal electrical central stations; Metodologia para realizar un diagnostico energetico en sistemas auxiliares de centrales termoelectricas

    Energy Technology Data Exchange (ETDEWEB)

    Nebradt Garcia, Jesus [Comision Federal de Electricidad (CFE), Mexico, D. F. (Mexico); Rojas Hidalgo, Ismael; Huante Perez, Liborio [Instituto de Investigaciones Electricas, Cuernavaca (Mexico)

    1999-12-31

    One of the potential areas for energy saving in Central Electric Power Plants are the auxiliaries system, so as to based in a preliminary energy diagnosis and considering that energy saving measures would be taken, going from the instrumentation, operational changes in equipment, as well as in using velocity variators in motors, it turns out to be that the energy consumption of auxiliaries at 75% load in a 150 MW thermal power plant varies from 3% to 4% and for the case of a 350 MW power plant the energy consumption of the auxiliaries represents 2 to 3.5%. Nowadays this consumption are above 6%. Considering that the country has 40 units with capacities varying from 150 to 350 MW, the economical and the fuel saving would be substantial. This paper will present a summary of the methodology to be used to carry out this type of projects. [Espanol] Una de las areas potenciales de ahorro de energia en centrales termoelectricas son los sistemas auxiliares, de tal manera que basados en un diagnostico energetico preliminar y considerando que se aplicarian las medidas de ahorro de energia que van desde la instrumentacion, cambios operativos en equipos, asi como el uso de variadores de velocidad en motores, se tienen que los consumos de auxiliares para un 75% de carga en una central termoelectrica de 150 MW varian desde un 3% hasta un 4% y para el caso de una central termoelectrica de 350 MW, el consumo de auxiliares representa del 2 al 3.5%. Hoy en dia dichos consumos estan por encima del 6%. Si consideramos que el pais cuenta con 40 unidades que varian desde 150 MW hasta 350 MW, entonces los ahorros economicos y de combustible serian impactantes. La presente ponencia mostrara un resumen de la metodologia a emplear para la realizacion de este tipo de proyectos.

  17. Sustainability of sunflower cultivation for biodiesel production in central Italy according to the Renewable Energy Directive methodology

    Directory of Open Access Journals (Sweden)

    Daniele Duca

    2014-02-01

    Full Text Available The use of renewable energies as alternative to fossil fuels has value from different points of view and has effects at environmental, social and economic level. These aspects are often connected to each other and together define the overall sustainability of bioenergy. At European level, the Directive 2009/28/EC gives the basic criteria for the estimation of sustainability of biofuels and indicates a minimum threshold of 35% of greenhouse gas saving for a biofuel in order to be considered sustainable. The Directive gives the possibility to identify standard regional values for the cultivation steps that could be utilized for the certification. This paper aims to give a contribution to the definition of these values considering the RED methodology applied to the sunflower cropped in central Italy which is characterized by a hilly landscape and not-irrigated crops. To determine input and output of sunflower cultivation in the central Italy, the results of PROBIO project, carried out by the Authors, were used. The sustainability of biodiesel produced from sunflower grown in central Italy is variable and depends on the nitrogen input and seasonal climatic conditions that affect the yields. The greenhouse gases savings of the Italian chain is 40% in average, greater than the required 35% and would be possible to assign this value as standard to the biofuel chain biodiesel from sunflower cultivated in central Italy. Using an averaged regional standard value guards against the possibility of considering unsustainable harvesting in unfavourable years and seeing it overestimated in the favourable ones.

  18. Changes in forest productivity across Alaska consistent with biome shift

    Science.gov (United States)

    Peter S.A. Beck; Glenn P. Juday; Claire Alix; Valerie A. Barber; Stephen E. Winslow; Emily E. Sousa; Patricia Heiser; James D. Herriges; Scott J. Goetz

    2011-01-01

    Global vegetation models predict that boreal forests are particularly sensitive to a biome shift during the 21st century. This shift would manifest itself first at the biome's margins, with evergreen forest expanding into current tundra while being replaced by grasslands or temperate forest at the biome's southern edge. We evaluated changes in forest...

  19. Mapping the geogenic radon potential: methodology and spatial analysis for central Hungary

    International Nuclear Information System (INIS)

    Szabó, Katalin Zsuzsanna; Jordan, Gyozo; Horváth, Ákos; Szabó, Csaba

    2014-01-01

    A detailed geogenic radon potential (GRP) mapping based on field soil gas radon and soil gas permeability measurements was carried out in this study. A conventional continuous variable approach was used in this study for GRP determination and to test its applicability to the selected area of Hungary. Spatial pattern of soil gas radon concentration, soil permeability and GRP and the relationship between geological formations and these parameters were studied by performing detailed spatial analysis. Exploratory data analysis revealed that higher soil gas radon activity concentration and GRP characterizes the mountains and hills than the plains. The highest values were found in the proluvial–deluvial sediments, rock debris on the downhill slopes eroded from hills. Among the Quaternary sediments, which characterize the study area, the fluvial sediment has the highest values, which are also located in the hilly areas. The lowest values were found in the plain areas covered by drift sand, fluvioeolic sand, fluvial sand and loess. As a conclusion, radon is related to the sediment cycle in the study area. A geogenic radon risk map was created, which assists human health risk assessment and risk reduction since it indicates the potential of the source of indoor radon. The map shows that low and medium geogenic radon potential characterizes the study area in central Hungary. High risk occurs only locally. The results reveal that Quaternary sediments are inhomogeneous from a radon point of view, fluvial sediment has medium GRP, whereas the other rock formations such as drift sand, fluioeolic sand, fluvial sand and loess, found in the study area, have low GRP. - Highlights: • First geogenic radon potential map in Hungary. • Low and medium GRP characterizes the study area (Middle Hungary). • Mainly quaternary sediments characterizes the study area. • Radon is related to the erosion and deposition of the sediment cycle

  20. Stature in archeological samples from central Italy: methodological issues and diachronic changes.

    Science.gov (United States)

    Giannecchini, Monica; Moggi-Cecchi, Jacopo

    2008-03-01

    Stature reconstructions from skeletal remains are usually obtained through regression equations based on the relationship between height and limb bone length. Different equations have been employed to reconstruct stature in skeletal samples, but this is the first study to provide a systematic analysis of the reliability of the different methods for Italian historical samples. Aims of this article are: 1) to analyze the reliability of different regression methods to estimate stature for populations living in Central Italy from the Iron Age to Medieval times; 2) to search for trends in stature over this time period by applying the most reliable regression method. Long bone measurements were collected from 1,021 individuals (560 males, 461 females), from 66 archeological sites for males and 54 for females. Three time periods were identified: Iron Age, Roman period, and Medieval period. To determine the most appropriate equation to reconstruct stature the Delta parameter of Gini (Memorie di metodologia statistica. Milano: Giuffre A. 1939), in which stature estimates derived from different limb bones are compared, was employed. The equations proposed by Pearson (Philos Trans R Soc London 192 (1899) 169-244) and Trotter and Gleser for Afro-Americans (Am J Phys Anthropol 10 (1952) 463-514; Am J Phys Anthropol 47 (1977) 355-356) provided the most consistent estimates when applied to our sample. We then used the equation by Pearson for further analyses. Results indicate a reduction in stature in the transition from the Iron Age to the Roman period, and a subsequent increase in the transition from the Roman period to the Medieval period. Changes of limb lengths over time were more pronounced in the distal than in the proximal elements in both limbs. 2007 Wiley-Liss, Inc.

  1. On coupling global biome models with climate models

    International Nuclear Information System (INIS)

    Claussen, M.

    1994-01-01

    The BIOME model of Prentice et al. (1992), which predicts global vegetation patterns in equilibrium with climate, is coupled with the ECHAM climate model of the Max-Planck-Institut fuer Meteorologie, Hamburg. It is found that incorporation of the BIOME model into ECHAM, regardless at which frequency, does not enhance the simulated climate variability, expressed in terms of differences between global vegetation patterns. Strongest changes are seen only between the initial biome distribution and the biome distribution computed after the first simulation period, provided that the climate-biome model is started from a biome distribution that resembles the present-day distribution. After the first simulation period, there is no significant shrinking, expanding, or shifting of biomes. Likewise, no trend is seen in global averages of land-surface parameters and climate variables. (orig.)

  2. Biogeography of photoautotrophs in the high polar biome

    Directory of Open Access Journals (Sweden)

    Stephen Brian Pointing

    2015-09-01

    Full Text Available The global latitudinal gradient in biodiversity weakens in the high polar biome and so an alternative explanation for distribution of Arctic and Antarctic photoautotrophs is required. Here we identify how temporal, microclimate and evolutionary drivers of biogeography are important, rather than the macroclimate features that drive plant diversity patterns elsewhere. High polar ecosystems are biologically unique, with a more central role for bryophytes, lichens and microbial photoautotrophs over that of vascular plants. Constraints on vascular plants arise mainly due to stature and ontogenetic barriers. Conversely non-vascular plant and microbial photoautotroph distribution is correlated with favourable microclimates and the capacity for poikilohydric dormancy. Contemporary distribution also depends on evolutionary history, with adaptive and dispersal traits as well as legacy influencing biogeography. We highlight the relevance of these findings to predicting future impacts on polar plant diversity and to the current status of plants in Arctic and Antarctic conservation policy frameworks.

  3. Biome Is Where the Art Is

    Science.gov (United States)

    Gooden, Kelly

    2005-01-01

    The author is surprised every year when fifth-grade students react to the study of biomes as if they've never given any thought to the differences across parts of the world. Sure, they've all heard of the tropical rain forest and the desert, but it seems as though they think the rest of the world is just some undefined area with climate, animals,…

  4. The Brazilian Pampa: A Fragile Biome

    Directory of Open Access Journals (Sweden)

    Valdir Marcos Stefenon

    2009-12-01

    Full Text Available Biodiversity is one of the most fundamental properties of Nature. It underpins the stability of ecosystems, provides vast bioresources for economic use, and has important cultural significance for many people. The Pampa biome, located in the southernmost state of Brazil, Rio Grande do Sul, illustrates the direct and indirect interdependence of humans and biodiversity. The Brazilian Pampa lies within the South Temperate Zone where grasslands scattered with shrubs and trees are the dominant vegetation. The soil, originating from sedimentary rocks, often has an extremely sandy texture that makes them fragile—highly prone to water and wind erosion. Human activities have converted or degraded many areas of this biome. In this review we discuss our state-of-the-art knowledge of the diversity and the major biological features of this regions and the cultural factors that have shaped it. Our aim is to contribute toward a better understanding of the current status of this special biome and to describe how the interaction between human activities and environment affects the region, highlighting the fragility of the Brazilian Pampa.

  5. Applying Central Composite Design and Response Surface Methodology to Optimize Growth and Biomass Production of Haemophilus influenzae Type b.

    Science.gov (United States)

    Momen, Seyed Bahman; Siadat, Seyed Davar; Akbari, Neda; Ranjbar, Bijan; Khajeh, Khosro

    2016-06-01

    Haemophilus influenzae type b (Hib) is the leading cause of bacterial meningitis, otitis media, pneumonia, cellulitis, bacteremia, and septic arthritis in infants and young children. The Hib capsule contains the major virulence factor, and is composed of polyribosyl ribitol phosphate (PRP) that can induce immune system response. Vaccines consisting of Hib capsular polysaccharide (PRP) conjugated to a carrier protein are effective in the prevention of the infections. However, due to costly processes in PRP production, these vaccines are too expensive. To enhance biomass, in this research we focused on optimizing Hib growth with respect to physical factors such as pH, temperature, and agitation by using a response surface methodology (RSM). We employed a central composite design (CCD) and a response surface methodology to determine the optimum cultivation conditions for growth and biomass production of H. influenzae type b. The treatment factors investigated were initial pH, agitation, and temperature, using shaking flasks. After Hib cultivation and determination of dry biomass, analysis of experimental data was performed by the RSM-CCD. The model showed that temperature and pH had an interactive effect on Hib biomass production. The dry biomass produced in shaking flasks was about 5470 mg/L, which was under an initial pH of 8.5, at 250 rpm and 35° C. We found CCD and RSM very effective in optimizing Hib culture conditions, and Hib biomass production was greatly influenced by pH and incubation temperature. Therefore, optimization of the growth factors to maximize Hib production can lead to 1) an increase in bacterial biomass and PRP productions, 2) lower vaccine prices, 3) vaccination of more susceptible populations, and 4) lower risk of Hib infections.

  6. Methodological and Practical Considerations for DevelopingMultiproject Baselines for Electric Power and Cement Industry Projects inCentral America

    Energy Technology Data Exchange (ETDEWEB)

    Murtishaw, Scott; Sathaye, Jayant; Galitsky, Christina; Dorion,Kristel

    2004-09-02

    The Lawrence Berkeley National Laboratory (Berkeley Lab) andthe Center for Sustainable Development in the Americas (CSDA) conductedtechnical studies and organized two training workshops to developcapacity in Central America for the evaluation of climate changeprojects. This paper describes the results of two baseline case studiesconducted for these workshops, one for the power sector and one for thecement industry, that were devised to illustrate certain approaches tobaseline setting. Multiproject baseline emission rates (BERs) for themain Guatemalan electricity grid were calculated from 2001 data. Inrecent years, the Guatemalan power sector has experienced rapid growth;thus, a sufficient number of new plants have been built to estimateviable BERs. We found that BERs for baseload plants offsetting additionalbaseload capacity ranged from 0.702 kgCO2/kWh (using a weighted averagestringency) to 0.507 kgCO2/kWh (using a 10th percentile stringency),while the baseline for plants offsetting load-followingcapacity is lowerat 0.567 kgCO2/kWh. For power displaced from existing load-followingplants, the rate is higher, 0.735 kgCO2/kWh, as a result of the age ofsome plants used for meeting peak loads and the infrequency of their use.The approved consolidated methodology for the Clean Development Mechanismyields a single rate of 0.753 kgCO2/kWh. Due to the relatively smallnumber of cement plants in the region and the regional nature of thecement market, all of Central America was chosen as the geographicboundary for setting cement industry BERs. Unfortunately, actualoperations and output data were unobtainable for most of the plants inthe region, and many data were estimated. Cement industry BERs rangedfrom 205 kgCO2 to 225 kgCO2 per metric ton of cement.

  7. Anthropogenic Biomes of the World, Version 2: 1700

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 1700 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

  8. Anthropogenic Biomes of the World, Version 2: 1900

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 1900 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

  9. Anthropogenic Biomes of the World, Version 2: 1800

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 1800 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

  10. Anthropogenic Biomes of the World, Version 2: 2000

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 2000 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

  11. Comparative patterns of plant invasions in the Mediterranean biome.

    Science.gov (United States)

    Arianoutsou, Margarita; Delipetrou, Pinelopi; Vilà, Montserrat; Dimitrakopoulos, Panayiotis G; Celesti-Grapow, Laura; Wardell-Johnson, Grant; Henderson, Lesley; Fuentes, Nicol; Ugarte-Mendes, Eduardo; Rundel, Philip W

    2013-01-01

    The objective of this work was to compare and contrast the patterns of alien plant invasions in the world's five mediterranean-climate regions (MCRs). We expected landscape age and disturbance history to have bearing on levels of invasion. We assembled a database on naturalized alien plant taxa occurring in natural and semi-natural terrestrial habitats of all five regions (specifically Spain, Italy, Greece and Cyprus from the Mediterranean Basin, California, central Chile, the Cape Region of South Africa and Southwestern - SW Australia). We used multivariate (hierarchical clustering and NMDS ordination) trait and habitat analysis to compare characteristics of regions, taxa and habitats across the mediterranean biome. Our database included 1627 naturalized species with an overall low taxonomic similarity among the five MCRs. Herbaceous perennials were the most frequent taxa, with SW Australia exhibiting both the highest numbers of naturalized species and the highest taxonomic similarity (homogenization) among habitats, and the Mediterranean Basin the lowest. Low stress and highly disturbed habitats had the highest frequency of invasion and homogenization in all regions, and high natural stress habitats the lowest, while taxonomic similarity was higher among different habitats in each region than among regions. Our analysis is the first to describe patterns of species characteristics and habitat vulnerability for a single biome. We have shown that a broad niche (i.e. more than one habitat) is typical of naturalized plant species, regardless of their geographical area of origin, leading to potential for high homogenization within each region. Habitats of the Mediterranean Basin are apparently the most resistant to plant invasion, possibly because their landscapes are generally of relatively recent origin, but with a more gradual exposure to human intervention over a longer period.

  12. La filatelia biomédica

    OpenAIRE

    Emilio J.A. Roldán; Claudio Zuckerberg

    2011-01-01

    La temática biomédica es un capítulo extendido de la filatelia o coleccionismo de sellos postales. Inaugura la temática la imagen de la diosa Hygeia, en un sello de la isla Nevis de 1861. Los primeros médicos retratados en una estampilla son tres constitucionalistas americanos, en un ejemplar de 1869, pero recién en 1937 aparecen médicos holandeses en reconocimiento específico de sus aportes a la salud. En la Argentina la primera estampilla que oficialmente se ocupa del tema es de 1944, en ay...

  13. Environmental history of the dry forest biome of Guerrero, Mexico, and human impact during the last c. 2700 years

    NARCIS (Netherlands)

    Berrio, J.C.; Hooghiemstra, H.; van Geel, B.; Ludlow-Wiegers, B.

    2006-01-01

    Two lake sediment cores from Madre del Sur mountain range, Guerrero State, west-central Mexico were studied to examine the past dynamics of the dry forest biome. Pollen, spores of coprophilous fungi, cyanobacteria and lithological changes are presented. The 390-cm Tixtla core (17°30′N, 99°24′W, 1400

  14. La filatelia biomédica

    Directory of Open Access Journals (Sweden)

    Emilio J.A. Roldán

    2011-02-01

    Full Text Available La temática biomédica es un capítulo extendido de la filatelia o coleccionismo de sellos postales. Inaugura la temática la imagen de la diosa Hygeia, en un sello de la isla Nevis de 1861. Los primeros médicos retratados en una estampilla son tres constitucionalistas americanos, en un ejemplar de 1869, pero recién en 1937 aparecen médicos holandeses en reconocimiento específico de sus aportes a la salud. En la Argentina la primera estampilla que oficialmente se ocupa del tema es de 1944, en ayuda de las víctimas del terremoto de San Juan. Florentino Ameghino es el primer científico incluido en 1954, y en 1967 se edita un sello conmemorativo de la Dra. Cecilia Grierson. La filatelia argentina luego reconoce varios de nuestros científicos y médicos, congresos, universidades, campañas sanitarias, temas de odontología, farmacia, enfermería y otros, generando un amplio material filatélico en reconocimiento del valor social que la ciencia biomédica argentina ha logrado en el contexto propio e internacional. Posiblemente sea un científico, el Dr. Bernardo Houssay, uno de los argentinos más veces editado en distintos sellos postales de la filatelia mundial.

  15. Changes in forest productivity across Alaska consistent with biome shift.

    Science.gov (United States)

    Beck, Pieter S A; Juday, Glenn P; Alix, Claire; Barber, Valerie A; Winslow, Stephen E; Sousa, Emily E; Heiser, Patricia; Herriges, James D; Goetz, Scott J

    2011-04-01

    Global vegetation models predict that boreal forests are particularly sensitive to a biome shift during the 21st century. This shift would manifest itself first at the biome's margins, with evergreen forest expanding into current tundra while being replaced by grasslands or temperate forest at the biome's southern edge. We evaluated changes in forest productivity since 1982 across boreal Alaska by linking satellite estimates of primary productivity and a large tree-ring data set. Trends in both records show consistent growth increases at the boreal-tundra ecotones that contrast with drought-induced productivity declines throughout interior Alaska. These patterns support the hypothesized effects of an initiating biome shift. Ultimately, tree dispersal rates, habitat availability and the rate of future climate change, and how it changes disturbance regimes, are expected to determine where the boreal biome will undergo a gradual geographic range shift, and where a more rapid decline. © 2011 Blackwell Publishing Ltd/CNRS.

  16. Improvement for enhanced xylanase production by Cellulosimicrobium cellulans CKMX1 using central composite design of response surface methodology.

    Science.gov (United States)

    Walia, Abhishek; Mehta, Preeti; Guleria, Shiwani; Shirkot, Chand Karan

    2015-12-01

    The effects of yeast extract (X 1 ), NH 4 NO 3 (X 2 ), peptone (X 3 ), urea (X 4 ), CMC (X 5 ), Tween 20 (X 6 ), MgSO 4 (X 7 ), and CaCO 3 (X 8 ) on production of xylanase from Cellulosimicrobium cellulans CKMX1 were optimized by statistical analysis using response surface methodology (RSM). The RSM was used to optimize xylanase production by implementing the Central composite design. Statistical analysis of the results showed that the linear, interaction and quadric terms of these variables had significant effects. However, only the linear effect of X 4 , X 5 , interaction effect of X 1 X 7 , X 1 X 8 , X 2 X 3 , X 2 X 8 , X 3 X 6 , X 3 X 8 , X 4 X 6 , X 4 X 7 , X 5 X 7 , X 5 X 8 and quadratic effect of X 3 2 , X 5 2 and X 7 2 found to be insignificant terms in the quadratic model and had no response at significant level. The minimum and maximum xylanase production obtained was 331.50 U/g DBP and 1027.65 U/g DBP, respectively. The highest xylanase activity was obtained from Run No. 30, which consisted of yeast extract (X 1 ), 1.00 g (%); NH 4 NO 3 (X 2 ), 0.20 g (%); peptone (X 3 ), 1.00 g (%); urea (X 4 ), 10 mg (%); CMC (X 5 ), 1.00 g (%); Tween 20 (X 6 ), 0.02 mL (%); CaCO 3 (X 7 ), 0.50 g (%) and MgSO 4 (X 8 ), 9.0 g (%). The optimization resulted in 3.1-fold increase of xylanase production, compared with the lowest xylanase production of 331.50 U/g DBP after 72 h of incubation in stationary flask experiment. Application of cellulase-free xylanase in pulp biobleaching from C. cellulans CKMX1 under C-E P -D sequence has been shown to bring about a 12.5 % reduction of chlorine, decrease of 0.8 kappa points (40 %), and gain in brightness was 1.42 % ISO points in 0.5 % enzyme treated pulp as compared to control.

  17. Climate-biomes, pedo-biomes and pyro-biomes: which world view explains the tropical forest - savanna boundary in South America?

    Science.gov (United States)

    Langan, Liam; Higgins, Steven; Scheiter, Simon

    2015-04-01

    Elucidating the drivers of broad vegetation formations improves our understanding of earth system functioning. The biome, defined primarily by the dominance of a particular growth strategy, is commonly employed to group vegetation into similar units. Predicting tropical forest and savanna biome boundaries in South America has proven difficult. Process based DGVMs (Dynamic global vegetation models) are our best tool to simulate vegetation patterns, make predictions for future changes and test theory, however, many DGVMs fail to accurately simulate the spatial distribution or indeed presence of the South American savanna biome which can result in large differences in modelled ecosystem structural properties. Evidence suggests fire plays a significant role in mediating these forest and savanna biome boundaries, however, fire alone does not appear to be sufficient to predict these boundaries in South America using DGVMs hinting at the presence of one or more missing environmental factors. We hypothesise that soil depth, which affects plant available water by determining maximum storage potential and influences temporal availability, may be one of these missing environmental factors. To test our hypothesis we use a novel vegetation model, the aDGVM2. This model has been specifically designed to allow plant trait strategies, constrained by trade-offs between traits, evolve based on the abiotic and biotic conditions where the resulting community trait suites are emergent properties of model dynamics. Furthermore it considers root biomass in multiple soil layers and therefore allows the consideration of alternative rooting strategies, which in turn allows us to explore in more detail the role of soil hydraulic factors in controlling biome boundary distributions. We find that changes in soil depth, interacting with fire, affect the relative dominance of tree and grass strategies and thus the presence and spatial distribution of forest and savanna biomes in South America

  18. Plant phylogeny as a window on the evolution of hyperdiversity in the tropical rainforest biome.

    Science.gov (United States)

    Eiserhardt, Wolf L; Couvreur, Thomas L P; Baker, William J

    2017-06-01

    I. II. III. IV. V. VI. VII. VIII. IX. References SUMMARY: Tropical rainforest (TRF) is the most species-rich terrestrial biome on Earth, harbouring just under half of the world's plant species in c. 7% of the land surface. Phylogenetic trees provide important insights into mechanisms underpinning TRF hyperdiversity that are complementary to those obtained from the fossil record. Phylogenetic studies of TRF plant diversity have mainly focused on whether this biome is an evolutionary 'cradle' or 'museum', emphasizing speciation and extinction rates. However, other explanations, such as biome age, immigration and ecological limits, must also be considered. We present a conceptual framework for addressing the drivers of TRF diversity, and review plant studies that have tested them with phylogenetic data. Although surprisingly few in number, these studies point to old age of TRF, low extinction and high speciation rates as credible drivers of TRF hyperdiversity. There is less evidence for immigration and ecological limits, but these cannot be dismissed owing to the limited number of studies. Rapid methodological developments in DNA sequencing, macroevolutionary analysis and the integration of phylogenetics with other disciplines may improve our grasp of TRF hyperdiversity in the future. However, such advances are critically dependent on fundamental systematic research, yielding numerous, additional, well-sampled phylogenies of TRF lineages. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  19. A hierarchical analysis of terrestrial ecosystem model Biome-BGC: Equilibrium analysis and model calibration

    Energy Technology Data Exchange (ETDEWEB)

    Thornton, Peter E [ORNL; Wang, Weile [ORNL; Law, Beverly E. [Oregon State University; Nemani, Ramakrishna R [NASA Ames Research Center

    2009-01-01

    The increasing complexity of ecosystem models represents a major difficulty in tuning model parameters and analyzing simulated results. To address this problem, this study develops a hierarchical scheme that simplifies the Biome-BGC model into three functionally cascaded tiers and analyzes them sequentially. The first-tier model focuses on leaf-level ecophysiological processes; it simulates evapotranspiration and photosynthesis with prescribed leaf area index (LAI). The restriction on LAI is then lifted in the following two model tiers, which analyze how carbon and nitrogen is cycled at the whole-plant level (the second tier) and in all litter/soil pools (the third tier) to dynamically support the prescribed canopy. In particular, this study analyzes the steady state of these two model tiers by a set of equilibrium equations that are derived from Biome-BGC algorithms and are based on the principle of mass balance. Instead of spinning-up the model for thousands of climate years, these equations are able to estimate carbon/nitrogen stocks and fluxes of the target (steady-state) ecosystem directly from the results obtained by the first-tier model. The model hierarchy is examined with model experiments at four AmeriFlux sites. The results indicate that the proposed scheme can effectively calibrate Biome-BGC to simulate observed fluxes of evapotranspiration and photosynthesis; and the carbon/nitrogen stocks estimated by the equilibrium analysis approach are highly consistent with the results of model simulations. Therefore, the scheme developed in this study may serve as a practical guide to calibrate/analyze Biome-BGC; it also provides an efficient way to solve the problem of model spin-up, especially for applications over large regions. The same methodology may help analyze other similar ecosystem models as well.

  20. Montane plant environments in the Fynbos Biome

    Directory of Open Access Journals (Sweden)

    B. M. Campbell

    1983-12-01

    Full Text Available Environmental data collected at 507 plots on 22 transects, and soil analytical data from 81 of these plots, have been used to describe the plant environments of the mountains in the Fynbos Biome. Two major regional gradients are recognized: a west-east gradient and a coast-interior gradient. Of particular consequence for fynbos-environment studies is the increase in the proportion of fine soil particles from west to east. At least some aspects of soil fertility also increase towards the east. The edaphic changes are paralleled by climatic changes: chiefly a decrease in the severity of summer drought towards the east. On the coast-interior gradient a major non-climatic variable in the gradient is rock cover. High rock cover is a feature of the interior ranges. Soils with organic horizons or with E horizons are a feature on the coastal mountains, but are generally lacking on the interior mountains. The other environmental gradients recognized occur on individual transects and all include edaphic variables. The rockiness-soil depth gradient, on which an increase in rockiness is associated with a decrease in soil depth and usually a decrease in clay content, tends to occur in three situations. Firstly, it is associated with local topographic variation; the shallow, rocky soils being a feature of the steeper slopes. Secondly, it is associated with the aspect gradient; the hot, dry northern aspects having shallow, rocky, less developed soils. Thirdly, it tends to be associated with the altitude-rainfall gradient: shallower soils being found at higher altitudes. It is also at higher altitudes that higher rainfall is found. Variation in oxidizable carbon is chiefly accounted for by the altitude-rainfall gradient. Whereas at a biome-wide level, aspects of soil fertility are related to soil texture, it appears that on individual transects fertility is linked to amounts of plant remains in the soil and to rainfall. Apart from these gradients, which are

  1. The Economics of Root Distributions of Terrestrial Biomes in Response to Elevated CO2

    Science.gov (United States)

    Lu, M.; Hedin, L. O. O.

    2017-12-01

    Belowground root distributions of terrestrial biomes are central to understanding soil biogeochemical processes and land carbon sink. Yet models are thus far not able to predict root distributions across plant functional groups and major biomes, limiting our ability to predict the response of land systems to elevated CO2 concentration. Of particular concern is the apparent lack of stimulation of the aboveground carbon sink despite 30% increase of atmospheric CO2 over the past half-century, and despite the clear acceleration of the land carbon sink over the same period. This apparent discrepancy in land ecosystem response has led to the proposition that changes in belowground root dynamics might be responsible for the overlooked land sink. We here present a new modeling approach for predicting the response of root biomass and soil carbon storage to increased CO2. Our approach considers the first-principle mechanisms and tradeoffs by which plants and plant roots invest carbon to gain belowground resources, in collaboration with distinct root symbioses. We allow plants to locally compete for nutrients, with the ability to allocate biomass at different depths in the soil profile. We parameterized our model using an unprecedented global dataset of root traits, and validated our biome-level predictions with a recently updated global root biomass database. Our results support the idea that plants "dig deeper" when exposed to increased CO2, and we offer an economic-based mechanism for predicting the plant root response across soil conditions, plant functional groups and major biomes. Our model also recreates the observed responses across a range of free-air CO2 enrichment experiments, including a distinct response between plants associated with ectomycorrhizal and arbuscular mycorrhizal fungi. Most broadly, our findings suggest that roots may be increasingly important in the land carbon sink, and call for a greater effort to quantify belowground responses to elevated

  2. The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.

    Science.gov (United States)

    Angly, Florent E; Willner, Dana; Prieto-Davó, Alejandra; Edwards, Robert A; Schmieder, Robert; Vega-Thurber, Rebecca; Antonopoulos, Dionysios A; Barott, Katie; Cottrell, Matthew T; Desnues, Christelle; Dinsdale, Elizabeth A; Furlan, Mike; Haynes, Matthew; Henn, Matthew R; Hu, Yongfei; Kirchman, David L; McDole, Tracey; McPherson, John D; Meyer, Folker; Miller, R Michael; Mundt, Egbert; Naviaux, Robert K; Rodriguez-Mueller, Beltran; Stevens, Rick; Wegley, Linda; Zhang, Lixin; Zhu, Baoli; Rohwer, Forest

    2009-12-01

    Metagenomic studies characterize both the composition and diversity of uncultured viral and microbial communities. BLAST-based comparisons have typically been used for such analyses; however, sampling biases, high percentages of unknown sequences, and the use of arbitrary thresholds to find significant similarities can decrease the accuracy and validity of estimates. Here, we present Genome relative Abundance and Average Size (GAAS), a complete software package that provides improved estimates of community composition and average genome length for metagenomes in both textual and graphical formats. GAAS implements a novel methodology to control for sampling bias via length normalization, to adjust for multiple BLAST similarities by similarity weighting, and to select significant similarities using relative alignment lengths. In benchmark tests, the GAAS method was robust to both high percentages of unknown sequences and to variations in metagenomic sequence read lengths. Re-analysis of the Sargasso Sea virome using GAAS indicated that standard methodologies for metagenomic analysis may dramatically underestimate the abundance and importance of organisms with small genomes in environmental systems. Using GAAS, we conducted a meta-analysis of microbial and viral average genome lengths in over 150 metagenomes from four biomes to determine whether genome lengths vary consistently between and within biomes, and between microbial and viral communities from the same environment. Significant differences between biomes and within aquatic sub-biomes (oceans, hypersaline systems, freshwater, and microbialites) suggested that average genome length is a fundamental property of environments driven by factors at the sub-biome level. The behavior of paired viral and microbial metagenomes from the same environment indicated that microbial and viral average genome sizes are independent of each other, but indicative of community responses to stressors and environmental conditions.

  3. The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.

    Directory of Open Access Journals (Sweden)

    Florent E Angly

    2009-12-01

    Full Text Available Metagenomic studies characterize both the composition and diversity of uncultured viral and microbial communities. BLAST-based comparisons have typically been used for such analyses; however, sampling biases, high percentages of unknown sequences, and the use of arbitrary thresholds to find significant similarities can decrease the accuracy and validity of estimates. Here, we present Genome relative Abundance and Average Size (GAAS, a complete software package that provides improved estimates of community composition and average genome length for metagenomes in both textual and graphical formats. GAAS implements a novel methodology to control for sampling bias via length normalization, to adjust for multiple BLAST similarities by similarity weighting, and to select significant similarities using relative alignment lengths. In benchmark tests, the GAAS method was robust to both high percentages of unknown sequences and to variations in metagenomic sequence read lengths. Re-analysis of the Sargasso Sea virome using GAAS indicated that standard methodologies for metagenomic analysis may dramatically underestimate the abundance and importance of organisms with small genomes in environmental systems. Using GAAS, we conducted a meta-analysis of microbial and viral average genome lengths in over 150 metagenomes from four biomes to determine whether genome lengths vary consistently between and within biomes, and between microbial and viral communities from the same environment. Significant differences between biomes and within aquatic sub-biomes (oceans, hypersaline systems, freshwater, and microbialites suggested that average genome length is a fundamental property of environments driven by factors at the sub-biome level. The behavior of paired viral and microbial metagenomes from the same environment indicated that microbial and viral average genome sizes are independent of each other, but indicative of community responses to stressors and

  4. Using an Exploratory Internet Activity & Trivia Game to Teach Students about Biomes

    Science.gov (United States)

    Richardson, Matthew L.

    2009-01-01

    Students in life science classes need an introduction to biomes, including an introduction to the concept, key biotic and abiotic features of biomes, and geographic locations of biomes. In this activity, students in seventh- and eighth-grade science classes used a directed exploratory Internet activity to learn about biomes. The author tested…

  5. Spatial Distribution of Aboveground Carbon Stock of the Arboreal Vegetation in Brazilian Biomes of Savanna, Atlantic Forest and Semi-Arid Woodland.

    Science.gov (United States)

    Scolforo, Henrique Ferraco; Scolforo, Jose Roberto Soares; Mello, Carlos Rogerio; Mello, Jose Marcio; Ferraz Filho, Antonio Carlos

    2015-01-01

    The objective of this study was to map the spatial distribution of aboveground carbon stock (using Regression-kriging) of arboreal plants in the Atlantic Forest, Semi-arid woodland, and Savanna Biomes in Minas Gerais State, southeastern Brazil. The database used in this study was obtained from 163 forest fragments, totaling 4,146 plots of 1,000 m2 distributed in these Biomes. A geographical model for carbon stock estimation was parameterized as a function of Biome, latitude and altitude. This model was applied over the samples and the residuals generated were mapped based on geostatistical procedures, selecting the exponential semivariogram theoretical model for conducting ordinary Kriging. The aboveground carbon stock was found to have a greater concentration in the north of the State, where the largest contingent of native vegetation is located, mainly the Savanna Biome, with Wooded Savanna and Shrub Savanna phytophysiognomes. The largest weighted averages of carbon stock per hectare were found in the south-center region (48.6 Mg/ha) and in the southern part of the eastern region (48.4 Mg/ha) of Minas Gerais State, due to the greatest predominance of Atlantic Forest Biome forest fragments. The smallest weighted averages per hectare were found in the central (21.2 Mg/ha), northern (20.4 Mg/ha), and northwestern (20.7 Mg/ha) regions of Minas Gerais State, where Savanna Biome fragments are predominant, in the phytophysiognomes Wooded Savanna and Shrub Savanna.

  6. Structural characterization of vegetation in the fynbos biome

    CSIR Research Space (South Africa)

    Campbell, BM

    1981-08-01

    Full Text Available A proposed system for the standardization of descriptive terminology for structural characterization of vegetation in the Fynbos Biome is presented in tabular form. Specific applications of the system are described and illustrations of some...

  7. Forest resilience to drought varies across biomes.

    Science.gov (United States)

    Gazol, Antonio; Camarero, Jesus Julio; Vicente-Serrano, Sergio M; Sánchez-Salguero, Raúl; Gutiérrez, Emilia; de Luis, Martin; Sangüesa-Barreda, Gabriel; Novak, Klemen; Rozas, Vicente; Tíscar, Pedro A; Linares, Juan C; Martín-Hernández, Natalia; Martínez Del Castillo, Edurne; Ribas, Montse; García-González, Ignacio; Silla, Fernando; Camisón, Alvaro; Génova, Mar; Olano, José M; Longares, Luis A; Hevia, Andrea; Tomás-Burguera, Miquel; Galván, J Diego

    2018-05-01

    Forecasted increase drought frequency and severity may drive worldwide declines in forest productivity. Species-level responses to a drier world are likely to be influenced by their functional traits. Here, we analyse forest resilience to drought using an extensive network of tree-ring width data and satellite imagery. We compiled proxies of forest growth and productivity (TRWi, absolutely dated ring-width indices; NDVI, Normalized Difference Vegetation Index) for 11 tree species and 502 forests in Spain corresponding to Mediterranean, temperate, and continental biomes. Four different components of forest resilience to drought were calculated based on TRWi and NDVI data before, during, and after four major droughts (1986, 1994-1995, 1999, and 2005), and pointed out that TRWi data were more sensitive metrics of forest resilience to drought than NDVI data. Resilience was related to both drought severity and forest composition. Evergreen gymnosperms dominating semi-arid Mediterranean forests showed the lowest resistance to drought, but higher recovery than deciduous angiosperms dominating humid temperate forests. Moreover, semi-arid gymnosperm forests presented a negative temporal trend in the resistance to drought, but this pattern was absent in continental and temperate forests. Although gymnosperms in dry Mediterranean forests showed a faster recovery after drought, their recovery potential could be constrained if droughts become more frequent. Conversely, angiosperms and gymnosperms inhabiting temperate and continental sites might have problems to recover after more intense droughts since they resist drought but are less able to recover afterwards. © 2018 John Wiley & Sons Ltd.

  8. Dynamic vegetation modeling of tropical biomes during Heinrich events

    Science.gov (United States)

    Handiani, Dian Noor; Paul, André; Dupont, Lydie M.

    2010-05-01

    Heinrich events are thought to be associated with a slowdown of the Atlantic Meridional Overturning Circulation (AMOC), which in turn would lead to a cooling of the North Atlantic Ocean and a warming of the South Atlantic Ocean (the "bipolar seesaw" hypothesis). The accompanying abrupt climate changes occurred not only in the ocean but also on the continents. Changes were strongest in the Northern Hemisphere but were registered in the tropics as well. Pollen data from Angola and Brazil showed that climate changes during Heinrich events affected vegetation patterns very differently in eastern South America and western Africa. To understand the differential response in the terrestrial tropics, we studied the vegetation changes during Heinrich events by using a dynamic global vegetation model (TRIFFID) as part of the University of Victoria (UVic) Earth System-Climate Model (ESCM). The model results show a bipolar seesaw pattern in temperature and precipitation during a near-collapse of the AMOC. The succession in plant-functional types (PFTs) showed changes from forest to shrubs to desert, including spreading desert in northwest Africa, retreating broadleaf trees in West Africa and northern South America, but advancing broadleaf trees in Brazil. The pattern is explained by a southward shift of the tropical rainbelt resulting in a strong decrease in precipitation over northwest and West Africa as well as in northern South America, but an increase in precipitation in eastern Brazil. To facilitate the comparison between modeled vegetation results with pollen data, we diagnosed the distribution of biomes from the PFT coverage and the simulated model climate. The biome distribution was computed for Heinrich event 1 and the Last Glacial Maximum as well as for pre-industrial conditions. We used a classification of biomes in terms of "mega-biomes", which were defined following a scheme originally proposed by BIOME 6000 (v 4.2). The biome distribution of the Sahel region

  9. On coupling global biome models with climate models

    OpenAIRE

    Claussen, M.

    1994-01-01

    The BIOME model of Prentice et al. (1992; J. Biogeogr. 19: 117-134), which predicts global vegetation patterns in equilibrium with climate, was coupled with the ECHAM climate model of the Max-Planck-Institut fiir Meteorologie, Hamburg, Germany. It was found that incorporation of the BIOME model into ECHAM, regardless at which frequency, does not enhance the simulated climate variability, expressed in terms of differences between global vegetation patterns. Strongest changes are seen only betw...

  10. Diverging responses of tropical Andean biomes under future climate conditions.

    Directory of Open Access Journals (Sweden)

    Carolina Tovar

    Full Text Available Observations and projections for mountain regions show a strong tendency towards upslope displacement of their biomes under future climate conditions. Because of their climatic and topographic heterogeneity, a more complex response is expected for biodiversity hotspots such as tropical mountain regions. This study analyzes potential changes in the distribution of biomes in the Tropical Andes and identifies target areas for conservation. Biome distribution models were developed using logistic regressions. These models were then coupled to an ensemble of 8 global climate models to project future distribution of the Andean biomes and their uncertainties. We analysed projected changes in extent and elevational range and identified regions most prone to change. Our results show a heterogeneous response to climate change. Although the wetter biomes exhibit an upslope displacement of both the upper and the lower boundaries as expected, most dry biomes tend to show downslope expansion. Despite important losses being projected for several biomes, projections suggest that between 74.8% and 83.1% of the current total Tropical Andes will remain stable, depending on the emission scenario and time horizon. Between 3.3% and 7.6% of the study area is projected to change, mostly towards an increase in vertical structure. For the remaining area (13.1%-17.4%, there is no agreement between model projections. These results challenge the common believe that climate change will lead to an upslope displacement of biome boundaries in mountain regions. Instead, our models project diverging responses, including downslope expansion and large areas projected to remain stable. Lastly, a significant part of the area expected to change is already affected by land use changes, which has important implications for management. This, and the inclusion of a comprehensive uncertainty analysis, will help to inform conservation strategies in the Tropical Andes, and to guide similar

  11. Generality of leaf trait relationships: A test across six biomes

    Energy Technology Data Exchange (ETDEWEB)

    Reich, P.B. [Univ. of Minnesota, Saint Paul, MN (United States). Dept. of Forest Resources; Ellsworth, D.S. [Brookhaven National Lab., Upton, NY (United States). Dept. of Applied Science; Walters, M.B. [Michigan State Univ., East Lansing, MI (United States). Dept. of Forestry; Vose, J.M. [Forest Service, Otto, NC (United States). Coweeta Hydrological Lab.; Gresham, C. [Clemson Univ., Georgetown, SC (United States). Baruch Forest Inst.; Volin, J.C. [Florida Atlantic Univ., Davie, FL (United States). Div. of Science; Bowman, W.D. [Inst. of Arctic and Alpine Research, Boulder, CO (United States). Mountain Research Station]|[Univ. of Colorado, Boulder, CO (United States). Dept. of Evolutionary, Population, and Organismic Biology

    1999-09-01

    Convergence in interspecific leaf trait relationships across diverse taxonomic groups and biomes would have important evolutionary and ecological implications. Such convergence has been hypothesized to result from trade-offs that limit the combination of plant traits for any species. Here the authors address this issue by testing for biome differences in the slope and intercept of interspecific relationships among leaf traits: longevity, net photosynthetic capacity (A{sub max}), leaf diffusive conductance (G{sub S}), specific leaf area (SLA), and nitrogen (N) status, for more than 100 species in six distinct biomes of the Americas. The six biomes were: alpine tundra-subalpine forest ecotone, cold temperate forest-prairie ecotone, montane cool temperate forest, desert shrubland, subtropical forest, and tropical rain forest. Despite large differences in climate and evolutionary history, in all biomes mass-based leaf N (N{sub mass}), SLA, G{sub S}, and A{sub max} were positively related to one another and decreased with increasing leaf life span. The relationships between pairs of leaf traits exhibited similar slopes among biomes, suggesting a predictable set of scaling relationships among key leaf morphological, chemical, and metabolic traits that are replicated globally among terrestrial ecosystems regardless of biome or vegetation type. However, the intercept (i.e., the overall elevation of regression lines) of relationships between pairs of leaf traits usually differed among biomes. With increasing aridity across sites, species had greater A{sub max} for a given level of G{sub S} and lower SLA for any given leaf life span. Using principal components analysis, most variation among species was explained by an axis related to mass-based leaf traits (A{sub max}, N, and SLA) while a second axis reflected climate, G{sub S}, and other area-based leaf traits.

  12. In vitro Alternative Methodologies for Central Nervous System Assessment: A Critique using Nanoscale Materials as an Example.

    Science.gov (United States)

    Identifying the potential health hazards to the central nervous system of a new family of materials presents many challenges. Whole-animal toxicity testing has been the tradition, but in vitro methods have been steadily gaining popularity. There are numerous challenges in testing...

  13. Development of a methodology for the economical analysis of fuel cycles, application to the Laguna Verde central

    International Nuclear Information System (INIS)

    Malfavon, S.M.; Trejo, M.G.; Hernandez, H.; Francois, J.L.; Ortega, R.F.

    2003-01-01

    In this work a methodology developed to carry out the economical analysis of the fuel cycle of a nuclear reactor is presented. The methodology was applied to the Laguna Verde Nuclear Power Station (CNLV). The design of the reload scenarios of the CNLV are made with the Core Master Presto code (CM-Presto), three-dimensional simulator of the reactor core, the launched data by this, as well as the information of the Energy use plan (PUE), it allowed us to obtain reliable results through the fitness of an algorithm of economic calculation that considers all the components of the fuel cycle to present worth. With the application of the methodology it was obtained the generated energy, as well as their respective cost of each sub lot type of assemblies by operation cycle, from the start-up of the CNLV until September 13, 2002. Using the present worth method its were moved all the values at November 5, 1988, date of operation beginning. To the final of the analysis an even cost of 6.188 mills/kWh was obtained for those first 9 cycles of the Unit 1 of the CNLV, being observed that the costs of those first 3 operation cycles are the more elevated. Considering only the values starting from the cycle 4, the levelled cost turns out to be of 5.96 mills/kWh. It was also obtained the cost by fuel lot to evaluate the performance of assemble with the same physical composition. (Author)

  14. USING LUDIC ACTIVITIES TO EXPLAIN THE BIOME CONCEPT

    Directory of Open Access Journals (Sweden)

    Aline Riccioni de Melos

    2015-12-01

    Full Text Available This paper contributes to research on the role of ludic activities in teaching and learning physical geography content during the last four years of primary school. We question the discourse that identifies students’ lack of interest as the obstacle to teaching physical geography. This study contributes by questioning this obstacle. We note that few studies exist on this topic, according to the CAPES (Coordination for higher Education Staff Development dissertation database, in 2011 only five were completed. The theoretical basis for the study considers work by Graciolli (2009, Silva et al. (2010, Rupel (2011 and Freitas and Salvi (2011, authors who defend the use of ludic activities in teaching methodology. In 2010, the “Biome Game” for 6th year students was developed based on this theoretical framework as part of the required course “Supervised Practice”. The goal of the activity was to think about how the concept of biome was created, and the methodology used valued recreational approaches. The empirical results of this experiment, which involved developing and implementing the game during the Supervised Practice course, demonstrate the importance of ludic pedagogical strategies for teaching physical geography in Brazilian primary education. O presente artigo traz contribuições de pesquisa sobre a função da ludicidade no ensino-aprendizagem de conteúdos da geografia física, no segundo segmento do ensino fundamental. Tal questão problematiza o discurso sobre o desinteresse dos alunos, como significativo obstáculo para a didática da geografia física. A pertinência do presente estudo está em reconhecer esta questão, tendo em vista que existem poucos estudos na área, totalizando em 2011, segundo o banco de dissertações da CAPES, somente cinco trabalhos concluídos. Nossa investigação dialoga com Graciolli (2009, Silva et al. (2010, Rupel (2011 e Freitas e Salvi (2011, autores dedicados à defesa da utilização de

  15. Response surface methodology (RSM) modeling of microwave-assisted extraction of natural dye from Swietenia mahagony: A comparation between Box-Behnken and central composite design method

    Science.gov (United States)

    Kusuma, Heri Septya; Sudrajat, Robby Ginanjar Margo; Susanto, David Febrilliant; Gala, Selfina; Mahfud, Mahfud

    2015-12-01

    The increasing demand of non-toxic and environmentally friendly dyes, colorants that come from natural source have risen as an alternative of sintetic poisonous dyes. In this research natural dye from S. mahagony was extracted using microwave-assisted extraction method under different operating condition such as extraction time (10-30min), plant material to solvent ratio (0.03-0.05g/mL) and microwave power level (100-380 watt). Box-Behnken method and central composite design (CCD) method is widely used for modeling response surface methodology (RSM), both methods show good prediction performance. In this study response surface methodology was performed to optimize the process, both methods were performed by the help Statgraphics Centurion 16 to evaluate the effects of different operating parameters. Finally, both methods were statistically compared by root mean square error (RMSE) and absolute average deviation (AAD) based on validation data set. Further, result suggests that CCD has better performance as compared to Box-Behnken method. The maximum yield obtained for Box-Behnken is 3.7647% (380 watt, 0.0339g/mL, 28.8899min) and 3.7506% (379.986 watt, 0.0378g/mL, 30min) for central composite design method.

  16. Early stage litter decomposition across biomes

    Science.gov (United States)

    Ika Djukic; Sebastian Kepfer-Rojas; Inger Kappel Schmidt; Klaus Steenberg Larsen; Claus Beier; Björn Berg; Kris Verheyen; Adriano Caliman; Alain Paquette; Alba Gutiérrez-Girón; Alberto Humber; Alejandro Valdecantos; Alessandro Petraglia; Heather Alexander; Algirdas Augustaitis; Amélie Saillard; Ana Carolina Ruiz Fernández; Ana I. Sousa; Ana I. Lillebø; Anderson da Rocha Gripp; André-Jean Francez; Andrea Fischer; Andreas Bohner; Andrey Malyshev; Andrijana Andrić; Andy Smith; Angela Stanisci; Anikó Seres; Anja Schmidt; Anna Avila; Anne Probst; Annie Ouin; Anzar A. Khuroo; Arne Verstraeten; Arely N. Palabral-Aguilera; Artur Stefanski; Aurora Gaxiola; Bart Muys; Bernard Bosman; Bernd Ahrends; Bill Parker; Birgit Sattler; Bo Yang; Bohdan Juráni; Brigitta Erschbamer; Carmen Eugenia Rodriguez Ortiz; Casper T. Christiansen; E. Carol Adair; Céline Meredieu; Cendrine Mony; Charles A. Nock; Chi-Ling Chen; Chiao-Ping Wang; Christel Baum; Christian Rixen; Christine Delire; Christophe Piscart; Christopher Andrews; Corinna Rebmann; Cristina Branquinho; Dana Polyanskaya; David Fuentes Delgado; Dirk Wundram; Diyaa Radeideh; Eduardo Ordóñez-Regil; Edward Crawford; Elena Preda; Elena Tropina; Elli Groner; Eric Lucot; Erzsébet Hornung; Esperança Gacia; Esther Lévesque; Evanilde Benedito; Evgeny A. Davydov; Evy Ampoorter; Fabio Padilha Bolzan; Felipe Varela; Ferdinand Kristöfel; Fernando T. Maestre; Florence Maunoury-Danger; Florian Hofhansl; Florian Kitz; Flurin Sutter; Francisco Cuesta; Francisco de Almeida Lobo; Franco Leandro de Souza; Frank Berninger; Franz Zehetner; Georg Wohlfahrt; George Vourlitis; Geovana Carreño-Rocabado; Gina Arena; Gisele Daiane Pinha; Grizelle González; Guylaine Canut; Hanna Lee; Hans Verbeeck; Harald Auge; Harald Pauli; Hassan Bismarck Nacro; Héctor A. Bahamonde; Heike Feldhaar; Heinke Jäger; Helena C. Serrano; Hélène Verheyden; Helge Bruelheide; Henning Meesenburg; Hermann Jungkunst; Hervé Jactel; Hideaki Shibata; Hiroko Kurokawa; Hugo López Rosas; Hugo L. Rojas Villalobos; Ian Yesilonis; Inara Melece; Inge Van Halder; Inmaculada García Quirós; Isaac Makelele; Issaka Senou; István Fekete; Ivan Mihal; Ivika Ostonen; Jana Borovská; Javier Roales; Jawad Shoqeir; Jean-Christophe Lata; Jean-Paul Theurillat; Jean-Luc Probst; Jess Zimmerman; Jeyanny Vijayanathan; Jianwu Tang; Jill Thompson; Jiří Doležal; Joan-Albert Sanchez-Cabeza; Joël Merlet; Joh Henschel; Johan Neirynck; Johannes Knops; John Loehr; Jonathan von Oppen; Jónína Sigríður Þorláksdóttir; Jörg Löffler; José-Gilberto Cardoso-Mohedano; José-Luis Benito-Alonso; Jose Marcelo Torezan; Joseph C. Morina; Juan J. Jiménez; Juan Dario Quinde; Juha Alatalo; Julia Seeber; Jutta Stadler; Kaie Kriiska; Kalifa Coulibaly; Karibu Fukuzawa; Katalin Szlavecz; Katarína Gerhátová; Kate Lajtha; Kathrin Käppeler; Katie A. Jennings; Katja Tielbörger; Kazuhiko Hoshizaki; Ken Green; Lambiénou Yé; Laryssa Helena Ribeiro Pazianoto; Laura Dienstbach; Laura Williams; Laura Yahdjian; Laurel M. Brigham; Liesbeth van den Brink; Lindsey Rustad; al. et

    2018-01-01

    Through litter decomposition enormous amounts of carbon is emitted to the atmosphere. Numerous large-scale decomposition experiments have been conducted focusing on this fundamental soil process in order to understand the controls on the terrestrial carbon transfer to the atmosphere. However, previous studies were mostly based on site-specific litter and methodologies...

  17. Conserving the Brazilian semiarid (Caatinga) biome under climate change

    DEFF Research Database (Denmark)

    Oliveira, Guilherme de; Bastos Araujo, Miguel; Rangel, Thiago Fernado

    2012-01-01

    to assess changes in climate suitability across individual species ranges, ensemble forecasting was used based on seven bioclimatic envelope models, three atmosphere–ocean general circulation models, and two greenhouse emission gas scenarios for 2020, 2050, and 2080. We found that most species will gain...... additional threats to the biome’s biodiversity. Here, we ask if the remnants of natural vegetation in Caatinga biome, where endemic terrestrial vertebrate species occur, are likely to retain more climatic suitability under climate change scenarios than other less pristine areas of the biome. In order......The Caatinga is a semiarid biome of the northeast of Brazil with only 1 % of its territory currently conserved. The biome’s biodiversity is highly threatened due to exposure to land conversion for agricultural and cattle ranch. Climate forecasts predict increases in aridity, which could pose...

  18. Remotely sensed phenology for mapping biomes and vegetation functional types

    CSIR Research Space (South Africa)

    Wessels, Konrad J

    2009-07-01

    Full Text Available clearly captured in Fig. 3. The majority of the pixels in the Savanna have a start of growing season in late October, midposition in February and end in June (Fig. 3). In contrast, the winter rainfall Succulent Karoo have a start of growing season... initially split the biomes based on vegetation production and then by the seasonality of growth IV - 1035 (Fig. 4). The three arid biomes (Desert, Succulent and Nama Figure 3. Frequency histograms of the mean START, midposition (MID) and END date...

  19. La prosodia como identificador biométrico

    OpenAIRE

    Farrús i Cabeceran, Mireia

    2011-01-01

    La biometría tiene como objetivo el reconocimiento de personas mediante uno o más identificadores biométricos como la voz, la cara o las huellas dactilares, entre otros. Gracias a la buena aceptación social y el poco intrusismo en los individuos, la voz ha sido, tradicionalmente, uno de los identificadores más utilizados en los sistemas biométricos. Estos sistemas de reconocimiento basados en la voz utilizan, habitualmente, características relacionadas con el espectro de la voz. No obstante, ...

  20. The development of a 4D treatment planning methodology to simulate the tracking of central lung tumors in an MRI-linac.

    Science.gov (United States)

    Al-Ward, Shahad M; Kim, Anthony; McCann, Claire; Ruschin, Mark; Cheung, Patrick; Sahgal, Arjun; Keller, Brian M

    2018-01-01

    Targeting and tracking of central lung tumors may be feasible on the Elekta MRI-linac (MRL) due to the soft-tissue visualization capabilities of MRI. The purpose of this work is to develop a novel treatment planning methodology to simulate tracking of central lung tumors with the MRL and to quantify the benefits in OAR sparing compared with the ITV approach. Full 4D-CT datasets for five central lung cancer patients were selected to simulate the condition of having 4D-pseudo-CTs derived from 4D-MRI data available on the MRL with real-time tracking capabilities. We used the MRL treatment planning system to generate two plans: (a) with a set of MLC-defined apertures around the target at each phase of the breathing ("4D-MRL" method); (b) with a fixed set of fields encompassing the maximum inhale and exhale of the breathing cycle ("ITV" method). For both plans, dose accumulation was performed onto a reference phase. To further study the potential benefits of a 4D-MRL method, the results were stratified by tumor motion amplitude, OAR-to-tumor proximity, and the relative OAR motion (ROM). With the 4D-MRL method, the reduction in mean doses was up to 3.0 Gy and 1.9 Gy for the heart and the lung. Moreover, the lung's V12.5 Gy was spared by a maximum of 300 cc. Maximum doses to serial organs were reduced by up to 6.1 Gy, 1.5 Gy, and 9.0 Gy for the esophagus, spinal cord, and the trachea, respectively. OAR dose reduction with our method depended on the tumor motion amplitude and the ROM. Some OARs with large ROMs and in close proximity to the tumor benefited from tracking despite small tumor amplitudes. We developed a novel 4D tracking methodology for the MRL for central lung tumors and quantified the potential dosimetric benefits compared with our current ITV approach. © 2017 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, Inc. on behalf of American Association of Physicists in Medicine.

  1. Application of the SWAT model to an endorheic watershed in the Central Spanish Pre-Pyrenees: Methodological approach and preliminary results

    Science.gov (United States)

    Gaspar, Leticia; White, Sue; Navas, Ana; López-Vicente, Manuel; Palazón, Leticia

    2013-04-01

    Modelling runoff and sediment transport at watershed scale are key tools to predict hydrological and sediment processes, identify soil sediment sources and estimate sediment yield, with the purpose of better managing soil and water resources. This study aims to apply the SWAT model in an endorheic watershed in the Central Spanish Pre-Pyrenees, where there have been a number of previous field-based studies on sediment sources and transfers. The Soil and Water Assessment Tool (SWAT) is a process based semi-distributed watershed scale hydrologic model, which can provide a high level of spatial detail by allowing the watershed to be divided into sub-basins. This study addresses the challenge of applying the SWAT model to an endorheic watershed that drains to a central lake, without external output, and without a network of permanent rivers. In this case it has been shown that the SWAT model does not correctly reproduce the stream network when using automatic watershed delineation, even with a high resolution Digital Elevation Model (5 x 5 metres). For this purpose, different approaches needed to be considered, such as i) user-defined watersheds and streams, ii) burning in a stream network or iii) modelling each sub-watershed separately. The objective of this study was to develop a new methodological approach for correctly simulating the main hydrological processes in an endorheic and complex karst watershed of the Spanish Pre-Pyrenees. The Estanque de Arriba Lake watershed (74 ha) is an endorheic system located in the Spanish Central Pre-Pyrenees. This watershed holds a small and permanent lake of fresh water (1.7 ha) and is a Site of Community Importance (European NATURA 2000 network). The study area is characterized by an abrupt topography with altitude range between 679 and 862 m and an average slope gradient of 24 %. Steep slopes (> 24 %) occupy the northern part of the watershed, whereas gentle slopes (

  2. Karoo biome: a preliminary sythesis. Part 1 - physical environment

    CSIR Research Space (South Africa)

    Cowling, RM

    1986-01-01

    Full Text Available . It is a multi-authored publication covering a wide range of topics. This first volume summarizes what is currently known on the physical environment of the biome; namely geology, soils, climate, hydrology, geohydrology and soil erosion. Other aspects...

  3. Importance of soil-water to the Caatinga biome, Brazil

    NARCIS (Netherlands)

    Alves Rodrigues Pinheiro, Everton; Metselaar, Klaas; Jong van Lier, de Quirijn; Araújo, de José Carlos

    2016-01-01

    Northeastern Brazil is hydrologically characterized by recurrent droughts leading to a highly vulnerable natural water resource system. The region contains the Caatinga biome, covering an area of approximately 800000km2. To increase insight in water balance components for this sparsely

  4. South African Red Data Book: Plants - fynbos and Karoo biomes

    CSIR Research Space (South Africa)

    Hall, AV

    1985-01-01

    Full Text Available In this report a list is given of 1 808 rare, threatened and recently extinct plants in the fynbos and karoo biomes in the Cape Province of South Africa. The area covers the south-western and southern Cape, Namaqualand and the Karoo. Following...

  5. Climate control of terrestrial carbon exchange across biomes and continents

    Science.gov (United States)

    Chuixiang Yi; Daniel Ricciuto; Runze Li; John Wolbeck; Xiyan Xu; Mats Nilsson; John Frank; William J. Massman

    2010-01-01

    Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate-carbon cycle feedbacks. However, directly observed relationships between climate and terrestrial CO2 exchange with the atmosphere across biomes...

  6. Climate control of terrestrial carbon exchange across biomes and continents

    Czech Academy of Sciences Publication Activity Database

    Yi, C.; Ricciuto, D.; Marek, Michal V.

    2010-01-01

    Roč. 5, č. 3 (2010), s. 034007 ISSN 1748-9326 Institutional research plan: CEZ:AV0Z60870520 Keywords : NEE * climate control * terrestrial carbon sequestration * temperature * dryness * eddy flux * biomes * photosynthesis * respiration * global carbon cycle Subject RIV: EH - Ecology, Behaviour Impact factor: 3.049, year: 2010

  7. Anthropogenic biomes: a key contribution to earth-system science

    Science.gov (United States)

    Lilian Alessa; F. Stuart Chapin

    2008-01-01

    Human activities now dominate most of the ice-free terrestrial surface. A recent article presents a classification and global map of human-influenced biomes of the world that provides a novel and potentially appropriate framework for projecting changes in earth-system dynamics.

  8. The effect of heterogeneous landscape dynamics on ecotone types at two convergent semi-arid biomes

    Science.gov (United States)

    Landscapes in biome transition zones consist of a mosaic of patches dominated or codominated by species from adjacent biomes. Shifts in the vegetation composition and dynamics of a biome transition zone depend upon the underlying patch dynamics of the ecotones between these dominant species. Landsca...

  9. Importance of ecotone type to landscape dynamics at biome transition zones

    Science.gov (United States)

    Landscapes in biome transition zones consist of a mosaic of patches dominated or codominated by species from adjacent biomes. Shifts in the vegetation composition and dynamics of a biome transition zone depend upon the underlying patch dynamics of the ecotones between these dominant species. Landsc...

  10. Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota.

    Science.gov (United States)

    Byrne, M; Yeates, D K; Joseph, L; Kearney, M; Bowler, J; Williams, M A J; Cooper, S; Donnellan, S C; Keogh, J S; Leys, R; Melville, J; Murphy, D J; Porch, N; Wyrwoll, K-H

    2008-10-01

    The integration of phylogenetics, phylogeography and palaeoenvironmental studies is providing major insights into the historical forces that have shaped the Earth's biomes. Yet our present view is biased towards arctic and temperate/tropical forest regions, with very little focus on the extensive arid regions of the planet. The Australian arid zone is one of the largest desert landform systems in the world, with a unique, diverse and relatively well-studied biota. With foci on palaeoenvironmental and molecular data, we here review what is known about the assembly and maintenance of this biome in the context of its physical history, and in comparison with other mesic biomes. Aridification of Australia began in the Mid-Miocene, around 15 million years, but fully arid landforms in central Australia appeared much later, around 1-4 million years. Dated molecular phylogenies of diverse taxa show the deepest divergences of arid-adapted taxa from the Mid-Miocene, consistent with the onset of desiccation. There is evidence of arid-adapted taxa evolving from mesic-adapted ancestors, and also of speciation within the arid zone. There is no evidence for an increase in speciation rate during the Pleistocene, and most arid-zone species lineages date to the Pliocene or earlier. The last 0.8 million years have seen major fluctuations of the arid zone, with large areas covered by mobile sand dunes during glacial maxima. Some large, vagile taxa show patterns of recent expansion and migration throughout the arid zone, in parallel with the ice sheet-imposed range shifts in Northern Hemisphere taxa. Yet other taxa show high lineage diversity and strong phylogeographical structure, indicating persistence in multiple localised refugia over several glacial maxima. Similar to the Northern Hemisphere, Pleistocene range shifts have produced suture zones, creating the opportunity for diversification and speciation through hybridisation, polyploidy and parthenogenesis. This review highlights

  11. NEE and GPP dynamic evolution at two biomes in the upper Spanish plateau

    Science.gov (United States)

    Sánchez, María Luisa; Pardo, Nuria; Pérez, Isidro Alberto; García, Maria de los Angeles

    2014-05-01

    In order to assess the ability of dominant biomes to act as a CO2 sink, two eddy correlation stations close to each other in central Spain have been concurrently operational since March 2008 until the present. The land use of the first station, AC, is a rapeseed rotating crop consisting of annual rotation of non-irrigated rapeseed, barley, peas, rye, and sunflower, respectively. The land use of the second, CIBA, is a mixture of open shrubs/crops, with open shrubs being markedly dominant. The period of measurements covered variable general meteorological conditions. 2009 and 2012 were dominated by drought, whereas 2010 was the rainiest year. Annual rainfall during 2008 and 2009 was close to the historical averaged annual means. This paper presents the dynamic evolution of NEE-8d and GPP-8d observed at the AC station over five years and compares the results with those concurrently observed at the CIBA station. GGP 8-d estimates at both stations were determined using a Light Use Efficiency Model, LUE. Input data for the LUE model were the FPAR 8-d products supplied by MODIS, PAR in situ measurements, and a scalar f, varying between 0 and 1, to take account of the reduction in maximum PAR conversion efficiency, ɛ0, under limiting environmental conditions. f values were assumed to be dependent on air temperature and evaporative fraction, EF, which was considered a proxy of soil moisture. ɛ0, a key parameter, which depends on land use types, was derived through the results of a linear regression fit between the GPP 8-d eddy covariance composites observed and the LUE concurrent 8-d model estimates. Over the five-year study period, both biomes behaved as CO2 sinks. However, the ratio of the NEE-8d total accumulated at AC and CIBA, respectively, was close to a factor two, revealing the effectiveness of the studied crops as CO2 sinks. On an annual basis, accumulated NEE-8d exhibited major variability in both biomes. At CIBA, the results were largely dominated by the

  12. Are There Consistent Grazing Indicators in Drylands? Testing Plant Functional Types of Various Complexity in South Africa’s Grassland and Savanna Biomes

    Science.gov (United States)

    Linstädter, Anja; Schellberg, Jürgen; Brüser, Katharina; Moreno García, Cristian A.; Oomen, Roelof J.; du Preez, Chris C.; Ruppert, Jan C.; Ewert, Frank

    2014-01-01

    Despite our growing knowledge on plants’ functional responses to grazing, there is no consensus if an optimum level of functional aggregation exists for detecting grazing effects in drylands. With a comparative approach we searched for plant functional types (PFTs) with a consistent response to grazing across two areas differing in climatic aridity, situated in South Africa’s grassland and savanna biomes. We aggregated herbaceous species into PFTs, using hierarchical combinations of traits (from single- to three-trait PFTs). Traits relate to life history, growth form and leaf width. We first confirmed that soil and grazing gradients were largely independent from each other, and then searched in each biome for PFTs with a sensitive response to grazing, avoiding confounding with soil conditions. We found no response consistency, but biome-specific optimum aggregation levels. Three-trait PFTs (e.g. broad-leaved perennial grasses) and two-trait PFTs (e.g. perennial grasses) performed best as indicators of grazing effects in the semi-arid grassland and in the arid savanna biome, respectively. Some PFTs increased with grazing pressure in the grassland, but decreased in the savanna. We applied biome-specific grazing indicators to evaluate if differences in grazing management related to land tenure (communal versus freehold) had effects on vegetation. Tenure effects were small, which we mainly attributed to large variability in grazing pressure across farms. We conclude that the striking lack of generalizable PFT responses to grazing is due to a convergence of aridity and grazing effects, and unlikely to be overcome by more refined classification approaches. Hence, PFTs with an opposite response to grazing in the two biomes rather have a unimodal response along a gradient of additive forces of aridity and grazing. The study advocates for hierarchical trait combinations to identify localized indicator sets for grazing effects. Its methodological approach may also be

  13. Are there consistent grazing indicators in Drylands? Testing plant functional types of various complexity in South Africa's Grassland and Savanna Biomes.

    Directory of Open Access Journals (Sweden)

    Anja Linstädter

    Full Text Available Despite our growing knowledge on plants' functional responses to grazing, there is no consensus if an optimum level of functional aggregation exists for detecting grazing effects in drylands. With a comparative approach we searched for plant functional types (PFTs with a consistent response to grazing across two areas differing in climatic aridity, situated in South Africa's grassland and savanna biomes. We aggregated herbaceous species into PFTs, using hierarchical combinations of traits (from single- to three-trait PFTs. Traits relate to life history, growth form and leaf width. We first confirmed that soil and grazing gradients were largely independent from each other, and then searched in each biome for PFTs with a sensitive response to grazing, avoiding confounding with soil conditions. We found no response consistency, but biome-specific optimum aggregation levels. Three-trait PFTs (e.g. broad-leaved perennial grasses and two-trait PFTs (e.g. perennial grasses performed best as indicators of grazing effects in the semi-arid grassland and in the arid savanna biome, respectively. Some PFTs increased with grazing pressure in the grassland, but decreased in the savanna. We applied biome-specific grazing indicators to evaluate if differences in grazing management related to land tenure (communal versus freehold had effects on vegetation. Tenure effects were small, which we mainly attributed to large variability in grazing pressure across farms. We conclude that the striking lack of generalizable PFT responses to grazing is due to a convergence of aridity and grazing effects, and unlikely to be overcome by more refined classification approaches. Hence, PFTs with an opposite response to grazing in the two biomes rather have a unimodal response along a gradient of additive forces of aridity and grazing. The study advocates for hierarchical trait combinations to identify localized indicator sets for grazing effects. Its methodological approach may

  14. Are there consistent grazing indicators in Drylands? Testing plant functional types of various complexity in South Africa's Grassland and Savanna Biomes.

    Science.gov (United States)

    Linstädter, Anja; Schellberg, Jürgen; Brüser, Katharina; Moreno García, Cristian A; Oomen, Roelof J; du Preez, Chris C; Ruppert, Jan C; Ewert, Frank

    2014-01-01

    Despite our growing knowledge on plants' functional responses to grazing, there is no consensus if an optimum level of functional aggregation exists for detecting grazing effects in drylands. With a comparative approach we searched for plant functional types (PFTs) with a consistent response to grazing across two areas differing in climatic aridity, situated in South Africa's grassland and savanna biomes. We aggregated herbaceous species into PFTs, using hierarchical combinations of traits (from single- to three-trait PFTs). Traits relate to life history, growth form and leaf width. We first confirmed that soil and grazing gradients were largely independent from each other, and then searched in each biome for PFTs with a sensitive response to grazing, avoiding confounding with soil conditions. We found no response consistency, but biome-specific optimum aggregation levels. Three-trait PFTs (e.g. broad-leaved perennial grasses) and two-trait PFTs (e.g. perennial grasses) performed best as indicators of grazing effects in the semi-arid grassland and in the arid savanna biome, respectively. Some PFTs increased with grazing pressure in the grassland, but decreased in the savanna. We applied biome-specific grazing indicators to evaluate if differences in grazing management related to land tenure (communal versus freehold) had effects on vegetation. Tenure effects were small, which we mainly attributed to large variability in grazing pressure across farms. We conclude that the striking lack of generalizable PFT responses to grazing is due to a convergence of aridity and grazing effects, and unlikely to be overcome by more refined classification approaches. Hence, PFTs with an opposite response to grazing in the two biomes rather have a unimodal response along a gradient of additive forces of aridity and grazing. The study advocates for hierarchical trait combinations to identify localized indicator sets for grazing effects. Its methodological approach may also be useful

  15. An End-to-End DNA Taxonomy Methodology for Benthic Biodiversity Survey in the Clarion-Clipperton Zone, Central Pacific Abyss

    Directory of Open Access Journals (Sweden)

    Adrian G. Glover

    2015-12-01

    Full Text Available Recent years have seen increased survey and sampling expeditions to the Clarion-Clipperton Zone (CCZ, central Pacific Ocean abyss, driven by commercial interests from contractors in the potential extraction of polymetallic nodules in the region. Part of the International Seabed Authority (ISA regulatory requirements are that these contractors undertake environmental research expeditions to their CCZ exploration claims following guidelines approved by the ISA Legal and Technical Commission (ISA, 2010. Section 9 (e of these guidelines instructs contractors to “…collect data on the sea floor communities specifically relating to megafauna, macrofauna, meiofauna, microfauna, nodule fauna and demersal scavengers”. There are a number of methodological challenges to this, including the water depth (4000–5000 m, extremely warm surface waters (~28 °C compared to bottom water (~1.5 °C and great distances to ports requiring a large and long seagoing expedition with only a limited number of scientists. Both scientists and regulators have recently realized that a major gap in our knowledge of the region is the fundamental taxonomy of the animals that live there; this is essential to inform our knowledge of the biogeography, natural history and ultimately our stewardship of the region. Recognising this, the ISA is currently sponsoring a series of taxonomic workshops on the CCZ fauna and to assist in this process we present here a series of methodological pipelines for DNA taxonomy (incorporating both molecular and morphological data of the macrofauna and megafauna from the CCZ benthic habitat in the recent ABYSSLINE cruise program to the UK-1 exploration claim. A major problem on recent CCZ cruises has been the collection of high-quality samples suitable for both morphology and DNA taxonomy, coupled with a workflow that ensures these data are made available. The DNA sequencing techniques themselves are relatively standard, once good samples have been

  16. Application of central composite face-centered design and response surface methodology for the optimization of electro-Fenton decolorization of Azure B dye.

    Science.gov (United States)

    Rosales, E; Sanromán, M A; Pazos, M

    2012-06-01

    The aim of this work was to improve the ability of electro-Fenton technique for the remediation of wastewater contaminated with synthetic dyes using a model azo dye such as Azure B. Batch experiments were conducted to study the effects of main parameters, such as dye concentration, electrode surface area, treatment time, and voltage. In this study, central composite face-centered experimental design matrix and response surface methodology were applied to design the experiments and evaluate the interactive effects of the four studied parameters. A total of 30 experimental runs were set, and the kinetic data were analyzed using first- and second-order models. The experimental data fitted to the empirical second-order model of a suitable degree for the maximum decolorization of Azure B by electro-Fenton treatment. ANOVA analysis showed high coefficient of determination value (R(2) = 0.9835) and reasonable second-order regression prediction. Pareto analysis suggests that the variables, time, and voltage produce the largest effect on the decolorization rate. Optimum conditions suggested by the second-order polynomial regression model for attaining maximum decolorization were dye concentration 4.83 mg/L, electrode surface area 15 cm(2), voltage 14.19 V, and treatment time of 34.58 min.

  17. Terrestrial ecology. Comprehensive study of the grassland biome

    International Nuclear Information System (INIS)

    Anon.

    1976-01-01

    Terrestrial ecology and grassland biome studies are designed to characterize the biota of the Hanford Reservation, elucidate seasonal dynamics of plant productivity, decomposition and mineral behavior patterns of important plant communities, and, to study the response of these communities to important natural environmental stresses, such as weather, wildfire and man-induced alterations of communities (influenced by grazing cattle and severe mechanical disturbance of the soil, such as affected by plowing or burial of waste materials or construction activities). A detailed account of the important findings of a 5-yr study is currently being prepared by the terrestrial ecology section staff for publication as a contribution to the International Biological Program Grassland Biome project

  18. BIOME: A browser-aware search and order system

    Science.gov (United States)

    Grubb, Jon W.; Jennings, Sarah V.; Yow, Teresa G.; Daughterty, Patricia F.

    1996-01-01

    The Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC), which is associated with NASA's Earth Observing System Data and Information System (EOSDIS), provides access to a large number of tabular and imagery datasets used in ecological and environmental research. Because of its large and diverse data holdings, the challenge for the ORNL DAAC is to help users find data of interest from the hundreds of thousands of files available at the DAAC without overwhelming them. Therefore, the ORNL DAAC developed the Biogeochemical Information Ordering Management Environment (BIOME), a search and order system for the World Wide Web (WWW). The WWW provides a new vehicle that allows a wide range of users access to the data. This paper describes the specialized attributes incorporated into BIOME that allow researchers easy access to an otherwise bewildering array of data products.

  19. Pennsylvanian coniferopsid forests in sabkha facies reveal the nature of seasonal tropical biome

    Science.gov (United States)

    Falcon-Lang, H. J.; Jud, N.A.; John, Nelson W.; DiMichele, W.A.; Chaney, D.S.; Lucas, S.G.

    2011-01-01

    Pennsylvanian fossil forests are known from hundreds of sites across tropical Pangea, but nearly all comprise remains of humid Coal Forests. Here we report a unique occurrence of seasonally dry vegetation, preserved in growth position along >5 km of strike, in the Pennsylvanian (early Kasimovian, Missourian) of New Mexico (United States). Analyses of stump anatomy, diameter, and spatial density, coupled with observations of vascular traces and associated megaflora, show that this was a deciduous, mixed-age, coniferopsid woodland (~100 trees per hectare) with an open canopy. The coniferopsids colonized coastal sabkha facies and show tree rings, confirming growth under seasonally dry conditions. Such woodlands probably served as the source of coniferopsids that replaced Coal Forests farther east in central Pangea during drier climate phases. Thus, the newly discovered woodland helps unravel biome-scale vegetation dynamics and allows calibration of climate models. ?? 2011 Geological Society of America.

  20. Parameterisation of Biome BGC to assess forest ecosystems in Africa

    Science.gov (United States)

    Gautam, Sishir; Pietsch, Stephan A.

    2010-05-01

    African forest ecosystems are an important environmental and economic resource. Several studies show that tropical forests are critical to society as economic, environmental and societal resources. Tropical forests are carbon dense and thus play a key role in climate change mitigation. Unfortunately, the response of tropical forests to environmental change is largely unknown owing to insufficient spatially extensive observations. Developing regions like Africa where records of forest management for long periods are unavailable the process-based ecosystem simulation model - BIOME BGC could be a suitable tool to explain forest ecosystem dynamics. This ecosystem simulation model uses descriptive input parameters to establish the physiology, biochemistry, structure, and allocation patterns within vegetation functional types, or biomes. Undocumented parameters for larger-resolution simulations are currently the major limitations to regional modelling in African forest ecosystems. This study was conducted to document input parameters for BIOME-BGC for major natural tropical forests in the Congo basin. Based on available literature and field measurements updated values for turnover and mortality, allometry, carbon to nitrogen ratios, allocation of plant material to labile, cellulose, and lignin pools, tree morphology and other relevant factors were assigned. Daily climate input data for the model applications were generated using the statistical weather generator MarkSim. The forest was inventoried at various sites and soil samples of corresponding stands across Gabon were collected. Carbon and nitrogen in the collected soil samples were determined from soil analysis. The observed tree volume, soil carbon and soil nitrogen were then compared with the simulated model outputs to evaluate the model performance. Furthermore, the simulation using Congo Basin specific parameters and generalised BIOME BGC parameters for tropical evergreen broadleaved tree species were also

  1. Softball Games Bring NCI and Leidos Biomed Employees Together | Poster

    Science.gov (United States)

    NCI and Leidos Biomed employees took to the fields at Nallin Pond for the third annual slow-pitch softball games on August 26. The series attracted 54 employees who were divided into four teams, Red, Blue, Gray, and White, and they were cheered on by about 40 enthusiastic spectators. In the first set of games, the Gray team defeated the Blue team, 15–8, and the White team

  2. A dated phylogeny and collection records reveal repeated biome shifts in the African genus Coccinia (Cucurbitaceae).

    Science.gov (United States)

    Holstein, Norbert; Renner, Susanne S

    2011-01-26

    Conservatism in climatic tolerance may limit geographic range expansion and should enhance the effects of habitat fragmentation on population subdivision. Here we study the effects of historical climate change, and the associated habitat fragmentation, on diversification in the mostly sub-Saharan cucurbit genus Coccinia, which has 27 species in a broad range of biota from semi-arid habitats to mist forests. Species limits were inferred from morphology, and nuclear and plastid DNA sequence data, using multiple individuals for the widespread species. Climatic tolerances were assessed from the occurrences of 1189 geo-referenced collections and WorldClim variables. Nuclear and plastid gene trees included 35 or 65 accessions, representing up to 25 species. The data revealed four species groups, one in southern Africa, one in Central and West African rain forest, one widespread but absent from Central and West African rain forest, and one that occurs from East Africa to southern Africa. A few individuals are differently placed in the plastid and nuclear (LFY) trees or contain two ITS sequence types, indicating hybridization. A molecular clock suggests that the diversification of Coccinia began about 6.9 Ma ago, with most of the extant species diversity dating to the Pliocene. Ancestral biome reconstruction reveals six switches between semi-arid habitats, woodland, and forest, and members of several species pairs differ significantly in their tolerance of different precipitation regimes. The most surprising findings of this study are the frequent biome shifts (in a relatively small clade) over just 6 - 7 million years and the limited diversification during and since the Pleistocene. Pleistocene climate oscillations may have been too rapid or too shallow for full reproductive barriers to develop among fragmented populations of Coccinia, which would explain the apparently still ongoing hybridization between certain species. Steeper ecological gradients in East Africa and

  3. A dated phylogeny and collection records reveal repeated biome shifts in the African genus Coccinia (Cucurbitaceae

    Directory of Open Access Journals (Sweden)

    Renner Susanne S

    2011-01-01

    Full Text Available Abstract Background Conservatism in climatic tolerance may limit geographic range expansion and should enhance the effects of habitat fragmentation on population subdivision. Here we study the effects of historical climate change, and the associated habitat fragmentation, on diversification in the mostly sub-Saharan cucurbit genus Coccinia, which has 27 species in a broad range of biota from semi-arid habitats to mist forests. Species limits were inferred from morphology, and nuclear and plastid DNA sequence data, using multiple individuals for the widespread species. Climatic tolerances were assessed from the occurrences of 1189 geo-referenced collections and WorldClim variables. Results Nuclear and plastid gene trees included 35 or 65 accessions, representing up to 25 species. The data revealed four species groups, one in southern Africa, one in Central and West African rain forest, one widespread but absent from Central and West African rain forest, and one that occurs from East Africa to southern Africa. A few individuals are differently placed in the plastid and nuclear (LFY trees or contain two ITS sequence types, indicating hybridization. A molecular clock suggests that the diversification of Coccinia began about 6.9 Ma ago, with most of the extant species diversity dating to the Pliocene. Ancestral biome reconstruction reveals six switches between semi-arid habitats, woodland, and forest, and members of several species pairs differ significantly in their tolerance of different precipitation regimes. Conclusions The most surprising findings of this study are the frequent biome shifts (in a relatively small clade over just 6 - 7 million years and the limited diversification during and since the Pleistocene. Pleistocene climate oscillations may have been too rapid or too shallow for full reproductive barriers to develop among fragmented populations of Coccinia, which would explain the apparently still ongoing hybridization between certain

  4. FIFE data analysis: Testing BIOME-BGC predictions for grasslands

    Science.gov (United States)

    Hunt, E. Raymond, Jr.

    1994-01-01

    The First International Satellite Land Surface Climatology Project (ISLSCP) Field Experiment (FIFE) was conducted in a 15 km by 15 km research area located 8 km south of Manhattan, Kansas. The site consists primarily of native tallgrass prairie mixed with gallery oak forests and croplands. The objectives of FIFE are to better understand the role of biology in controlling the interactions between the land and the atmosphere, and to determine the value of remotely sensed data for estimating climatological parameters. The goals of FIFE are twofold: the upscale integration of models, and algorithm development for satellite remote sensing. The specific objectives of the field campaigns carried out in 1987 and 1989 were the simultaneous acquisition of satellite, atmospheric, and surface data; and the understanding of the processes controlling surface energy and mass exchange. Collected data were used to study the dynamics of various ecosystem processes (photosynthesis, evaporation and transpiration, autotrophic and heterotrophic respiration, etc.). Modelling terrestrial ecosystems at scales larger than that of a homogeneous plot led to the development of simple, generalized models of biogeochemical cycles that can be accurately applied to different biomes through the use of remotely sensed data. A model was developed called BIOME-BGC (for BioGeochemical Cycles) from a coniferous forest ecosystem model, FOREST-BGC, where a biome is considered a combination of a life forms in a specified climate. A predominately C4-photosynthetic grassland is probably the most different from a coniferous forest possible, hence the FIFE site was an excellent study area for testing BIOME-BGC. The transition from an essentially one-dimensional calculation to three-dimensional, landscape scale simulations requires the introduction of such factors as meteorology, climatology, and geomorphology. By using remotely sensed geographic information data for important model inputs, process

  5. Estimating carbon flux phenology with satellite-derived land surface phenology and climate drivers for different biomes: a synthesis of AmeriFlux observations.

    Directory of Open Access Journals (Sweden)

    Wenquan Zhu

    Full Text Available Carbon Flux Phenology (CFP can affect the interannual variation in Net Ecosystem Exchange (NEE of carbon between terrestrial ecosystems and the atmosphere. In this study, we proposed a methodology to estimate CFP metrics with satellite-derived Land Surface Phenology (LSP metrics and climate drivers for 4 biomes (i.e., deciduous broadleaf forest, evergreen needleleaf forest, grasslands and croplands, using 159 site-years of NEE and climate data from 32 AmeriFlux sites and MODIS vegetation index time-series data. LSP metrics combined with optimal climate drivers can explain the variability in Start of Carbon Uptake (SCU by more than 70% and End of Carbon Uptake (ECU by more than 60%. The Root Mean Square Error (RMSE of the estimations was within 8.5 days for both SCU and ECU. The estimation performance for this methodology was primarily dependent on the optimal combination of the LSP retrieval methods, the explanatory climate drivers, the biome types, and the specific CFP metric. This methodology has a potential for allowing extrapolation of CFP metrics for biomes with a distinct and detectable seasonal cycle over large areas, based on synoptic multi-temporal optical satellite data and climate data.

  6. Multi-Criteria GIS Methodology Focused on the Location of Optimal Places for Small Hydro Power Via Hydrological and Geostatistic Aplications; Metodologia SIG Multicriterio Enfocada a la Localizacion de Enclaves Optimos para Centrales de Minihidroelectricas mediante Aplicaciones Hidrologicas y Geoestadisticas

    Energy Technology Data Exchange (ETDEWEB)

    Paz, C de la

    2013-02-01

    The main objective of this research is the development of a location methodology for sitting optimization of small hydro power (SHP) centrals. In order of achieve this goal, a Multi-Criteria Evaluation (MCE) methodology implemented through the use of tools in a GIS environment: Spatial Analysis, Geostatistic Analysis, and Hydrology have been developed. This methodology includes two different models based on the same MCE process. The substantial difference of both models is in the input data and the tools applied to estimate the energy resource and the principal factor of the methodology (caudal or accumulated flow). The first model is generated from caudal data obtained in the study area (El Bierzo), and the second one from pluviometric data and Digital Terrain Model (DTM). Both models include viability maps with greater ability areas to locate SHP facilities. As an additional objective, the study allows contrasting the results of the two developed models to evaluate their similarity. (Author)

  7. A GIS-based methodology for highlighting fuelwood supply/demand imbalances at the local level: A case study for Central Mexico

    International Nuclear Information System (INIS)

    Ghilardi, Adrian; Guerrero, Gabriela; Masera, Omar

    2009-01-01

    When fuelwood is harvested at a rate exceeding natural growth and inefficient conversion technologies are used, negative environmental and socio-economic impacts, such as fuelwood shortages, natural forests degradation and net GHG emissions arise. In this study, we argue that analyzing fuelwood supply/demand spatial patterns require multi-scale approaches to effectively bridge the gap between national results with local situations. The proposed methodology is expected to help 1) focusing resources and actions on local critical situations, starting from national wide analyses and 2) estimating, within statistically robust confidence bounds, the proportion of non-renewable harvested fuelwood. Starting from a previous work, we selected a county-based fuelwood hot spot in the Central Highlands of Mexico, identified from a national wide assessment, and developed a grid-based model in order to identify single localities that face concomitant conditions of high fuelwood consumption and insufficient fuelwood resources. By means of a multi-criteria analysis (MCA), twenty localities, out of a total of 90, were identified as critical in terms of six indicators related to fuelwood use and availability of fuelwood resources. Fuelwood supply/demand balances varied among localities from -16.2 ± 2.5 Gg y -1 to 4.4 ± 2.6 Gg y -1 , while fractions of non-renewable fuelwood varied from 0 to 96%. These results support the idea that balances and non-renewable fuelwood fractions (mandatory inputs for Clean Development Mechanism (CDM) cookstoves projects) must be calculated on a locality by locality basis if gross under or over-estimations want to be avoided in the final carbon accounting. (author)

  8. The Effect of Adding Comorbidities to Current Centers for Disease Control and Prevention Central-Line-Associated Bloodstream Infection Risk-Adjustment Methodology.

    Science.gov (United States)

    Jackson, Sarah S; Leekha, Surbhi; Magder, Laurence S; Pineles, Lisa; Anderson, Deverick J; Trick, William E; Woeltje, Keith F; Kaye, Keith S; Stafford, Kristen; Thom, Kerri; Lowe, Timothy J; Harris, Anthony D

    2017-09-01

    BACKGROUND Risk adjustment is needed to fairly compare central-line-associated bloodstream infection (CLABSI) rates between hospitals. Until 2017, the Centers for Disease Control and Prevention (CDC) methodology adjusted CLABSI rates only by type of intensive care unit (ICU). The 2017 CDC models also adjust for hospital size and medical school affiliation. We hypothesized that risk adjustment would be improved by including patient demographics and comorbidities from electronically available hospital discharge codes. METHODS Using a cohort design across 22 hospitals, we analyzed data from ICU patients admitted between January 2012 and December 2013. Demographics and International Classification of Diseases, Ninth Edition, Clinical Modification (ICD-9-CM) discharge codes were obtained for each patient, and CLABSIs were identified by trained infection preventionists. Models adjusting only for ICU type and for ICU type plus patient case mix were built and compared using discrimination and standardized infection ratio (SIR). Hospitals were ranked by SIR for each model to examine and compare the changes in rank. RESULTS Overall, 85,849 ICU patients were analyzed and 162 (0.2%) developed CLABSI. The significant variables added to the ICU model were coagulopathy, paralysis, renal failure, malnutrition, and age. The C statistics were 0.55 (95% CI, 0.51-0.59) for the ICU-type model and 0.64 (95% CI, 0.60-0.69) for the ICU-type plus patient case-mix model. When the hospitals were ranked by adjusted SIRs, 10 hospitals (45%) changed rank when comorbidity was added to the ICU-type model. CONCLUSIONS Our risk-adjustment model for CLABSI using electronically available comorbidities demonstrated better discrimination than did the CDC model. The CDC should strongly consider comorbidity-based risk adjustment to more accurately compare CLABSI rates across hospitals. Infect Control Hosp Epidemiol 2017;38:1019-1024.

  9. Use of BIOME-BGC to simulate water and carbon fluxes within Mediterranean macchia

    OpenAIRE

    Chiesi M; Chirici G; Corona P; Duce P; Salvati R; Spano D; Vaccari FP; Maselli F

    2012-01-01

    The biogeochemical model BIOME-BGC is capable to estimate the main ecophysiological processes characterising all terrestrial ecosystems. To this aim it needs to be properly adapted to reproduce the behaviour of each biome type through a calibration phase. The aim of this paper is to adapt BIOME-BGC to reproduce the evapotranspiration (ET) and photosynthesis (GPP) of Mediterranean macchia spread all over Italy. Ten different sites were selected in the Centre-South of Italy and their gross prim...

  10. Evaluating fire danger in Brazilian biomes: present and future patterns

    Science.gov (United States)

    Silva, Patrícia; Bastos, Ana; DaCamara, Carlos; Libonati, Renata

    2017-04-01

    Climate change is expected to have a significant impact on fire occurrence and activity, particularly in Brazil, a region known to be fire-prone [1]. The Brazilian savanna, commonly referred to as cerrado, is a fire-adapted biome covering more than 20% of the country's total area. It presents the highest numbers of fire events, making it particularly susceptible to changes in climate. It is thus essential to understand the present fire regimes in Brazilian biomes, in order to better evaluate future patterns. The CPTEC/INPE, the Brazilian Center for Weather Forecasting and Climate Research at the Brazilian National Institute of Space Research developed a fire danger index based on the occurrence of hundreds of thousands of fire events in the main Brazilian biomes [2]: the Meteorological Fire Danger Index (MFDI). This index indicates the predisposition of vegetation to be burned on a given day, for given climate conditions preceding that day. It relies on daily values of air temperature, relative humidity, accumulated precipitation and vegetation cover. In this study we aim to access the capability of the MFDI to accurately replicate present fire conditions for different biomes, with a special focus on cerrado. To this end, we assess the link between the MFDI as calculated by three different reanalysis (ERA-Interim, NCEP/DOE Reanalysis 2 and MERRA-2) and the observed burned area. We further calculate the validated MFDI using a regional climate model, the RCA4 as forced by EC-Earth from CORDEX, to understand the ability of the model to characterize present fire danger. Finally, the need to calibrate the model to better characterize future fire danger was also evaluated. This work was developed within the framework of the Brazilian Fire-Land-Atmosphere System (BrFLAS) Project financed by the Portuguese and Brazilian science foundations, FCT and FAPESP (project references FAPESP/1389/2014 and 2014/20042-2). [1] KRAWCHUK, M.A.; MORITZ, M.A.; PARISIEN, M.A.; VAN DORN, J

  11. Methodology of complexity analysis of Emergency Operating Procedures for Nuclear Power Plants; Metodologia de analisis de complejidad de Procedimientos de Operacion de Emergencia de Centrales Nucleares

    Energy Technology Data Exchange (ETDEWEB)

    Martorell, P.; Martorell, S.; Marton, I.; Pelayo, F.; Mendizabal, R.

    2013-07-01

    The Emergency Operating Procedures (SOPs) set out the stages and contain actions to be executed by an operator to respond to an emergency situation. Methodologies are being developed to assess aspects such as complexity, completeness and vulnerability of these procedures. A methodology is presented in this paper to develop a network topology POE and analysis focused on the same complexity as a fundamental attribute.

  12. Ticks parasitizing bats (Mammalia: Chiroptera) in the Caatinga Biome, Brazil.

    Science.gov (United States)

    Luz, Hermes Ribeiro; Muñoz-Leal, Sebastián; Almeida, Juliana Cardoso de; Faccini, João Luiz Horacio; Labruna, Marcelo Bahia

    2016-01-01

    In this paper, the authors report ticks parasitizing bats from the Serra das Almas Natural Reserve (RPPN) located in the municipality of Crateús, state of Ceará, in the semiarid Caatinga biome of northeastern Brazil. The study was carried out during nine nights in the dry season (July 2012) and 10 nights in the rainy season (February 2013). Only bats of the Phyllostomidae and Mormoopidae families were parasitized by ticks. The species Artibeus planirostris and Carolia perspicillata were the most parasitized. A total of 409 larvae were collected and classified into three genera: Antricola (n = 1), Nothoaspis (n = 1) and Ornithodoros (n = 407). Four species were morphologically identified as Nothoaspis amazoniensis, Ornithodoros cavernicolous, Ornithodoros fonsecai, Ornithodoros hasei, and Ornithodoros marinkellei. Ornithodoros hasei was the most common tick associated with bats in the current study. The present study expand the distributional ranges of at least three soft ticks into the Caatinga biome, and highlight an unexpected richness of argasid ticks inhabiting this arid ecosystem.

  13. Ticks parasitizing bats (Mammalia: Chiroptera in the Caatinga Biome, Brazil

    Directory of Open Access Journals (Sweden)

    Hermes Ribeiro Luz

    Full Text Available Abstract In this paper, the authors report ticks parasitizing bats from the Serra das Almas Natural Reserve (RPPN located in the municipality of Crateús, state of Ceará, in the semiarid Caatinga biome of northeastern Brazil. The study was carried out during nine nights in the dry season (July 2012 and 10 nights in the rainy season (February 2013. Only bats of the Phyllostomidae and Mormoopidae families were parasitized by ticks. The species Artibeus planirostris and Carolia perspicillata were the most parasitized. A total of 409 larvae were collected and classified into three genera: Antricola (n = 1, Nothoaspis (n = 1 and Ornithodoros (n = 407. Four species were morphologically identified as Nothoaspis amazoniensis, Ornithodoros cavernicolous, Ornithodoros fonsecai, Ornithodoros hasei, and Ornithodoros marinkellei. Ornithodoros hasei was the most common tick associated with bats in the current study. The present study expand the distributional ranges of at least three soft ticks into the Caatinga biome, and highlight an unexpected richness of argasid ticks inhabiting this arid ecosystem.

  14. Development of a methodology for the evaluation of energy efficiency of central irrigation pivots; Desenvolvimento de uma metodologia para a avaliacao da eficiencia energetica de pivos centrais de irrigacao

    Energy Technology Data Exchange (ETDEWEB)

    Lima, Aureo Cezar de [Centro Federal de Educacao Tecnologica de Petrolina (CEFET-Pet), PE (Brazil); Guimaraes Junior, Sebastiao Camargo; Camacho, Jose Roberto; Salerno, Carlos Henrique [Universidade Federal de Uberlandia (NERFAE/UFU), MG (Brazil). Fac. de Engenharia Eletrica. Nucleo de Eletricidade Rural e Fontes Alternativas de Energia

    2006-07-01

    It will be presented in this work a methodology for the evaluation of the energy efficiency of irrigation center systems by central pivot. Integrating water efficiency application with the energy associated to the sprinklers, adduction pipeline, pivot arm and pump systems, the proposed indexes make possible to evaluate the energy income of each component of the irrigation system, contributing for the increase of the global efficiency of the irrigated agriculture. (author)

  15. Towards reconstructing herbaceous biome dynamics and associated precipitation in Africa: insights from the classification of grass morphological traits

    Science.gov (United States)

    Pasturel, Marine; Alexandre, Anne; Novello, Alice; Moctar Dieye, Amadou; Wele, Abdoulaye; Paradis, Laure; Hely, Christelle

    2014-05-01

    Inter-tropical herbaceous ecosystems occupy a 1/5th of terrestrial surface, a half of the African continent, and are expected to extend in the next decades. Dynamic of these ecosystems is simulated with poor accuracy by Dynamic Global Vegetation Models (DGVMs). One of the bias results from the fact that the diversity of the grass layer dominating these herbaceous ecosystems is poorly taken into account. Mean annual precipitation and the length of the dry season are the main constrains of the dynamics of these ecosystems. Conversely, changes in vegetation affect the water cycle. Inaccuracy in herbaceous ecosystem simulation thus impacts simulations of the water cycle (including precipitation) and vice versa. In order to increase our knowledge of the relationships between grass morphological traits, taxonomy, biomes and climatic niches in Western and South Africa, a 3-step methodology was followed: i) values of culm height, leaf length and width of dominant grass species from Senegal were gathered from flora and clustered using the Partition Around Medoids (PAM) method; ii) trait group ability to sign climatic domains and biomes was assessed using Kruskal-Wallis tests; iii) genericity and robustness of the trait groups were evaluated through their application to Chadian and South African botanical datasets. Results show that 8 grass trait groups are present either in Senegal, Chad or South Africa. These 8 trait groups are distributed along mean annual precipitation and dry season length gradients. The combination of three of them allow to discriminate mean annual precipitation domains (1000 mm) and herbaceous biomes (steppes, savannas, South African grasslands and Nama-Karoo). With these results in hand, grass Plant Functional Types (PFTs) of the DGMV LPJ-GUESS will be re-parameterized and particular attention will be given to the herbaceous biomass assigned to each grass trait group. Simultaneously, relationships between grass trait groups and phytolith vegetation

  16. biojs-io-biom, a BioJS component for handling data in Biological Observation Matrix (BIOM format [version 2; referees: 1 approved, 2 approved with reservations

    Directory of Open Access Journals (Sweden)

    Markus J. Ankenbrand

    2017-01-01

    Full Text Available The Biological Observation Matrix (BIOM format is widely used to store data from high-throughput studies. It aims at increasing interoperability of bioinformatic tools that process this data. However, due to multiple versions and implementation details, working with this format can be tricky. Currently, libraries in Python, R and Perl are available, whilst such for JavaScript are lacking. Here, we present a BioJS component for parsing BIOM data in all format versions. It supports import, modification, and export via a unified interface. This module aims to facilitate the development of web applications that use BIOM data. Finally, we demonstrate its usefulness by two applications that already use this component. Availability: https://github.com/molbiodiv/biojs-io-biom, https://dx.doi.org/10.5281/zenodo.218277

  17. Pollen-based biome reconstruction for southern Europe and Africa 18,000 yr BP

    NARCIS (Netherlands)

    Elenga, H; Peyron, O; Bonnefille, R; Jolly, D; Cheddadi, R; Guiot, J; Andrieu, [No Value; Bottema, S; Buchet, G; de Beaulieu, JL; Hamilton, AC; Maley, J; Marchant, R; Perez-Obiol, R; Reille, M; Riollet, G; Scott, L; Straka, H; Taylor, D; Van Campo, E; Vincens, A; Laarif, F; Jonson, H

    Pollen data from 18,000 C-14 yr sp were compiled in order to reconstruct biome distributions at the last glacial maximum in southern Europe and Africa. Biome reconstructions were made using the objective biomization method applied to pollen counts using a complete list of dryland taxa wherever

  18. Factors affecting ammonium uptake in streams - an inter-biome perspective

    Science.gov (United States)

    Jackson R Webster; Partick J. Mulholland; Jennifer L. Tanks; H. Maurice Valett; Walter K. Dodds; Bruce J. Peterson; William B. Bowden; Clifford N. Dahm; Stuart Findlay; Stanley V. Gregory; Nancy B. Grimm; Stephen K. Hamilton; Sherri L. Johnson; Eugenia Marti; William H. McDowell; Judy L. Meyer; Donna D. Morrall; Steven A. Thomas; Wilfred M. Wollhem

    2003-01-01

    1. The Lotic Intersite Nitrogen experiment (LINX) was a coordinated study of the relationships between North American biomes and factors governing ammonium uptake in streams. Our objective was to relate inter-biome variability of ammonium uptake to physical, chemical and biological processes. 2. Data were collected from 11 streams ranging from arctic to tropical and...

  19. Increasing atmospheric CO2 overrides the historical legacy of multiple stable biome states in Africa.

    Science.gov (United States)

    Moncrieff, Glenn R; Scheiter, Simon; Bond, William J; Higgins, Steven I

    2014-02-01

    The dominant vegetation over much of the global land surface is not predetermined by contemporary climate, but also influenced by past environmental conditions. This confounds attempts to predict current and future biome distributions, because even a perfect model would project multiple possible biomes without knowledge of the historical vegetation state. Here we compare the distribution of tree- and grass-dominated biomes across Africa simulated using a dynamic global vegetation model (DGVM). We explicitly evaluate where and under what conditions multiple stable biome states are possible for current and projected future climates. Our simulation results show that multiple stable biomes states are possible for vast areas of tropical and subtropical Africa under current conditions. Widespread loss of the potential for multiple stable biomes states is projected in the 21st Century, driven by increasing atmospheric CO2 . Many sites where currently both tree-dominated and grass-dominated biomes are possible become deterministically tree-dominated. Regions with multiple stable biome states are widespread and require consideration when attempting to predict future vegetation changes. Testing for behaviour characteristic of systems with multiple stable equilibria, such as hysteresis and dependence on historical conditions, and the resulting uncertainty in simulated vegetation, will lead to improved projections of global change impacts. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

  20. Climate change in Inner Mongolia from 1955 to 2005-trends at regional, biome and local scales

    Energy Technology Data Exchange (ETDEWEB)

    Lu, N; Wilske, B; John, R; Chen, J [Department of Environmental Sciences, University of Toledo, Toledo, OH 43606 (United States); Ni, J, E-mail: nan.lu@utoledo.ed, E-mail: burkhard.wilske@utoledo.ed, E-mail: jni@ibcas.ac.c, E-mail: ranjeet.john@utoledo.ed, E-mail: jiquan.chen@utoledo.ed [Alfred Wegener Institute for Polar and Marine Research, Telegrafenberg A43, D-14473 Potsdam (Germany)

    2009-10-15

    This study investigated the climate change in Inner Mongolia based on 51 meteorological stations from 1955 to 2005. The climate data was analyzed at the regional, biome (i.e. forest, grassland and desert) and station scales, with the biome scale as our primary focus. The climate records showed trends of warmer and drier conditions in the region. The annual daily mean, maximum and minimum temperature increased whereas the diurnal temperature range (DTR) decreased. The decreasing trend of annual precipitation was not significant. However, the vapor pressure deficit (VPD) increased significantly. On the decadal scale, the warming and drying trends were more significant in the last 30 years than the preceding 20 years. The climate change varied among biomes, with more pronounced changes in the grassland and the desert biomes than in the forest biome. DTR and VPD showed the clearest inter-biome gradient from the lowest rate of change in the forest biome to the highest rate of change in the desert biome. The rates of change also showed large variations among the individual stations. Our findings correspond with the IPCC predictions that the future climate will vary significantly by location and through time, suggesting that adaptation strategies also need to be spatially viable.

  1. S2Biom database with logistical components of the biomass value chain

    NARCIS (Netherlands)

    Annevelink, E.; Groot, de H.L.E.; Shah, N.; Giarola, S.; Pantaleo, M.; Anttila, P.; Vis, Martijn; Raa, te Rik; Berg, van den Douwe; Gabrielle, B.

    2015-01-01

    The S2Biom project (www.s2biom.eu) - Delivery of sustainable supply of non-food biomass to support
    a resource-efficient Bioeconomy in Europe - supports sustainable delivery chains of non-food biomass feedstock.
    This poses a logistical challenge because the quality and handling

  2. Climate change in Inner Mongolia from 1955 to 2005-trends at regional, biome and local scales

    International Nuclear Information System (INIS)

    Lu, N; Wilske, B; John, R; Chen, J; Ni, J

    2009-01-01

    This study investigated the climate change in Inner Mongolia based on 51 meteorological stations from 1955 to 2005. The climate data was analyzed at the regional, biome (i.e. forest, grassland and desert) and station scales, with the biome scale as our primary focus. The climate records showed trends of warmer and drier conditions in the region. The annual daily mean, maximum and minimum temperature increased whereas the diurnal temperature range (DTR) decreased. The decreasing trend of annual precipitation was not significant. However, the vapor pressure deficit (VPD) increased significantly. On the decadal scale, the warming and drying trends were more significant in the last 30 years than the preceding 20 years. The climate change varied among biomes, with more pronounced changes in the grassland and the desert biomes than in the forest biome. DTR and VPD showed the clearest inter-biome gradient from the lowest rate of change in the forest biome to the highest rate of change in the desert biome. The rates of change also showed large variations among the individual stations. Our findings correspond with the IPCC predictions that the future climate will vary significantly by location and through time, suggesting that adaptation strategies also need to be spatially viable.

  3. Mid- to Late-Holocene pollen-based biome reconstructions for Colombia

    NARCIS (Netherlands)

    Marchant, R.; Behling, H.; Berrío, J.C.; Cleef, A.M.; Duivenvoorden, J.; Hooghiemstra, H.; Kuhry, P.; Melief, B.; Geel, van B.; Hammen, van der T.; Reenen, van T.; Wille, M.

    2001-01-01

    The assignment of Colombian pollen data to biomes allows the data to be synthesised at 10 `time windows' from the present-day to 6000 radiocarbon years before present (BP). The modern reconstructed biomes are compared to a map of modern potential vegetation to check the applicability of the method

  4. Climate and litter quality differently modulate the effects of soil fauna on litter decomposition across biomes.

    Science.gov (United States)

    García-Palacios, Pablo; Maestre, Fernando T; Kattge, Jens; Wall, Diana H

    2013-08-01

    Climate and litter quality have been identified as major drivers of litter decomposition at large spatial scales. However, the role played by soil fauna remains largely unknown, despite its importance for litter fragmentation and microbial activity. We synthesised litterbag studies to quantify the effect sizes of soil fauna on litter decomposition rates at the global and biome scales, and to assess how climate, litter quality and soil fauna interact to determine such rates. Soil fauna consistently enhanced litter decomposition at both global and biome scales (average increment ~ 37%). [corrected]. However, climate and litter quality differently modulated the effects of soil fauna on decomposition rates between biomes, from climate-driven biomes to those where climate effects were mediated by changes in litter quality. Our results advocate for the inclusion of biome-specific soil fauna effects on litter decomposition as a mean to reduce the unexplained variation in large-scale decomposition models. © 2013 John Wiley & Sons Ltd/CNRS.

  5. Climate sensitivity of shrub growth across the tundra biome

    DEFF Research Database (Denmark)

    Myers-Smith, Isla H.; Elmendorf, Sarah C.; Beck, Pieter S.A.

    2015-01-01

    Rapid climate warming in the tundra biome has been linked to increasing shrub dominance1–4. Shrub expansion can modify climate by altering surface albedo, energy and water balance, and permafrost2,5–8, yet the drivers of shrub growth remain poorly understood. Dendroecological data consisting...... of multi-decadal time series of annual shrub growth provide an underused resource to explore climate–growth relationships. Here, we analyse circumpolar data from 37 Arctic and alpine sites in 9 countries, including 25 species, and 42,000 annual growth records from 1,821 individuals. Our analyses...... demonstrate that the sensitivity of shrub growth to climate was: (1) heterogeneous, with European sites showing greater summer temperature sensitivity than North American sites, and (2) higher at sites with greater soil moisture and for taller shrubs (for example, alders and willows) growing at their northern...

  6. Improved simulation of poorly drained forests using Biome-BGC.

    Science.gov (United States)

    Bond-Lamberty, Ben; Gower, Stith T; Ahl, Douglas E

    2007-05-01

    Forested wetlands and peatlands are important in boreal and terrestrial biogeochemical cycling, but most general-purpose forest process models are designed and parameterized for upland systems. We describe changes made to Biome-BGC, an ecophysiological process model, that improve its ability to simulate poorly drained forests. Model changes allowed for: (1) lateral water inflow from a surrounding watershed, and variable surface and subsurface drainage; (2) adverse effects of anoxic soil on decomposition and nutrient mineralization; (3) closure of leaf stomata in flooded soils; and (4) growth of nonvascular plants (i.e., bryophytes). Bryophytes were treated as ectohydric broadleaf evergreen plants with zero stomatal conductance, whose cuticular conductance to CO(2) was dependent on plant water content. Individual model changes were parameterized with published data, and ecosystem-level model performance was assessed by comparing simulated output to field data from the northern BOREAS site in Manitoba, Canada. The simulation of the poorly drained forest model exhibited reduced decomposition and vascular plant growth (-90%) compared with that of the well-drained forest model; the integrated bryophyte photosynthetic response accorded well with published data. Simulated net primary production, biomass and soil carbon accumulation broadly agreed with field measurements, although simulated net primary production was higher than observed data in well-drained stands. Simulated net primary production in the poorly drained forest was most sensitive to oxygen restriction on soil processes, and secondarily to stomatal closure in flooded conditions. The modified Biome-BGC remains unable to simulate true wetlands that are subject to prolonged flooding, because it does not track organic soil formation, water table changes, soil redox potential or anaerobic processes.

  7. Two New Species and New Occurrences of Syneches Walker for Brazilian Biome of Caatinga (Diptera: Hybotidae: Hybotinae).

    Science.gov (United States)

    Soares, M M M; Ale-Rocha, R

    2018-03-13

    Syneches from Brazilian biome of Caatinga were studied, two new species are described, Syneches atratus sp. nov. and Syneches limeirai sp. nov., and three species, Syneches annulipes Bezzi, 1909, Syneches moraballi Smith, 1963, and Syneches rafaeli Ale-Rocha & Vieira, 2008, are recorded for the biome. An identification key for the species of Syneches from Caatinga biome is provided.

  8. Eastern deciduous forest biome progress report, September 1, 1975--August 31, 1976

    International Nuclear Information System (INIS)

    Burgess, R.L.; Tarr, N.E.

    1978-09-01

    The report concentrates on the six projects as well as results from synthesis activities at the Lake George, Lake Wingra, and Oak Ridge sites. The centralized analysis and modeling component and the Eastern Decidious Forest Biome Information Center progress during the past year are also addressed. The project on belowground dynamics of ecosystems is investigating the allocation of phytosynthetic products into fixed or labile storage pools. Root sampling, radioactive tracer techniques, and biochemical analyses are leading to an understanding of complete tree physioogy requisite for interpreting forest growth in different environments. The Role of Consumers project has begun to document the regulatory role of heterotrophs in an array of ecosystem niches. Decomposition of woody substrates, studies of the contribution of canopy and litter arthropods to material processing, and the flow and remineralization of phosphorus in lake systems are leading to a comprehensive understanding of the role of consumer organisms in ecosystem function. The Microdynamics of Detritus project continues its investigations of carbon and nitrogen dynamics in freshwater lakes. Examination of potential pathways of detritus processing is illustrating the parts that physical and biological processes play in the breakdown of organic materials

  9. Quantitative comparison of the in situ microbial communities in different biomes

    Energy Technology Data Exchange (ETDEWEB)

    White, D.C. [Tennessee Univ., Knoxville, TN (United States)]|[Oak Ridge National Lab., TN (United States); Ringelberg, D.B.; Palmer, R.J. [Tennessee Univ., Knoxville, TN (United States). Center for Environmental Biotechnology

    1995-12-31

    A system to define microbial communities in different biomes requires the application of non-traditional methodology. Classical microbiological methods have severe limitations for the analysis of environmental samples. Pure-culture isolation, biochemical testing, and/or enumeration by direct microscopic counting are not well suited for the estimation of total biomass or the assessment of community composition within environmental samples. Such methods provide little insight into the in situ phenotypic activity of the extant microbiota since these techniques are dependent on microbial growth and thus select against many environmental microorganisms which are non- culturable under a wide range of conditions. It has been repeatedly documented in the literature that viable counts or direct counts of bacteria attached to sediment grains are difficult to quantitative and may grossly underestimate the extent of the existing community. The traditional tests provide little indication of the in situ nutritional status or for evidence of toxicity within the microbial community. A more recent development (MIDI Microbial Identification System), measure free and ester-linked fatty acids from isolated microorganisms. Bacterial isolates are identified by comparing their fatty acid profiles to the MIKI database which contains over 8000 entries. The application of the MIKI system to the analysis of environmental samples however, has significant drawbacks. The MIDI system was developed to identify clinical microorganisms and requires their isolation and culture on trypticase soy agar at 27{degrees}C. Since many isolates are unable to grow at these restrictive growth conditions, the system does not lend itself to identification of some environmental organisms. A more applicable methodology for environmental microbial analysis is based on the liquid extrication and separation of microbial lipids from environmental samples, followed by quantitative analysis using gas chromatography/

  10. La filatelia biomédica Biomedicine philately

    Directory of Open Access Journals (Sweden)

    Emilio J.A. Roldán

    2011-02-01

    Full Text Available La temática biomédica es un capítulo extendido de la filatelia o coleccionismo de sellos postales. Inaugura la temática la imagen de la diosa Hygeia, en un sello de la isla Nevis de 1861. Los primeros médicos retratados en una estampilla son tres constitucionalistas americanos, en un ejemplar de 1869, pero recién en 1937 aparecen médicos holandeses en reconocimiento específico de sus aportes a la salud. En la Argentina la primera estampilla que oficialmente se ocupa del tema es de 1944, en ayuda de las víctimas del terremoto de San Juan. Florentino Ameghino es el primer científico incluido en 1954, y en 1967 se edita un sello conmemorativo de la Dra. Cecilia Grierson. La filatelia argentina luego reconoce varios de nuestros científicos y médicos, congresos, universidades, campañas sanitarias, temas de odontología, farmacia, enfermería y otros, generando un amplio material filatélico en reconocimiento del valor social que la ciencia biomédica argentina ha logrado en el contexto propio e internacional. Posiblemente sea un científico, el Dr. Bernardo Houssay, uno de los argentinos más veces editado en distintos sellos postales de la filatelia mundial.Biomedicine is a vast field in philately or stamp collecting. It opens the topic the image of the goddess Hygeia, issued in a stamp from Nevis Island dated 1861. The first physicians to appear printed in stamps, in 1869, were three American constitutionalists, but only in 1937 there appear Dutch physicians as an acknowledgement of their contribution to public health. In Argentina the first stamp officially related to the topic was issued in 1944, to raise funds for the victims of the San Juan earthquake. Florentino Ameghino was the first scientist included in 1954, and in 1967 a stamp was issued in honour of Dr. Cecilia Grierson. Afterwards, Argentinean philately has recognized several of our scientists and physicians, congresses, universities, health campaigns, dentistry topics

  11. Development of a methodology for the economical analysis of fuel cycles, application to the Laguna Verde central; Desarrollo de una metodologia para el analisis economico de ciclos de combustible, aplicacion a la Central Laguna Verde

    Energy Technology Data Exchange (ETDEWEB)

    Malfavon, S.M.; Trejo, M.G.; Hernandez, H. [FI-UNAM, 04500 Mexico D.F. (Mexico); Francois, J.L.; Ortega, R.F. [FI-UNAM, Paseo Cuauhnahuac 8532, Jiutepec, Morelos (Mexico)

    2003-07-01

    In this work a methodology developed to carry out the economical analysis of the fuel cycle of a nuclear reactor is presented. The methodology was applied to the Laguna Verde Nuclear Power Station (CNLV). The design of the reload scenarios of the CNLV are made with the Core Master Presto code (CM-Presto), three-dimensional simulator of the reactor core, the launched data by this, as well as the information of the Energy use plan (PUE), it allowed us to obtain reliable results through the fitness of an algorithm of economic calculation that considers all the components of the fuel cycle to present worth. With the application of the methodology it was obtained the generated energy, as well as their respective cost of each sub lot type of assemblies by operation cycle, from the start-up of the CNLV until September 13, 2002. Using the present worth method its were moved all the values at November 5, 1988, date of operation beginning. To the final of the analysis an even cost of 6.188 mills/kWh was obtained for those first 9 cycles of the Unit 1 of the CNLV, being observed that the costs of those first 3 operation cycles are the more elevated. Considering only the values starting from the cycle 4, the levelled cost turns out to be of 5.96 mills/kWh. It was also obtained the cost by fuel lot to evaluate the performance of assemble with the same physical composition. (Author)

  12. Simulating economics and environmental impacts of beef and soybean systems in Brazil's Pamas and Amozon Biomes

    Science.gov (United States)

    Recent reductions in the deforestation of the Amazon biome have highlighted the need for the sustainable intensification of beef and commodity crop production in Brazil to increase agricultural productivity without accelerating adverse environmental impacts related to greenhouse gas emissions, eutro...

  13. Biome-BGC: Modeling Effects of Disturbance and Climate (Thornton et al. 2002)

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This archived model product contains the directions, executables, and procedures for running Biome-BGC, Version 4.1.1, to recreate the results of the...

  14. BIOME: A scientific data archive search-and-order system using browser-aware, dynamic pages

    Science.gov (United States)

    Jennings, S. V.; Yow, T. G.; Ng, V. W.

    1997-01-01

    The Oak Ridge National Laboratory's (ORNL) Distributed Active Archive Center (DAAC) is a data archive and distribution center for the National Air and Space Administration's (NASA) Earth Observing System Data and Information System (EOSDIS). Both the Earth Observing System (EOS) and EOSDIS are components of NASA's contribution to the US Global Change Research Program through its Mission to Planet Earth Program. The ORNL DAAC provides access to data used in ecological and environmental research such as global change, global warming, and terrestrial ecology. Because of its large and diverse data holdings, the challenge for the ORNL DAAC is to help users find data of interest from the hundreds of thousands of files available at the DAAC without overwhelming them. Therefore, the ORNL DAAC has developed the Biogeochemical Information Ordering Management Environment (BIOME), a customized search and order system for the World Wide Web (WWW). BIOME is a public system located at http://www-eosdis. ornl.gov/BIOME/biome.html.

  15. Biome-BGC: Modeling Carbon Dynamics in Ponderosa Pine Stands (Law et al. 2003)

    Data.gov (United States)

    National Aeronautics and Space Administration — This archived model product contains the directions, executables, and procedures for running Biome-BGC, Version 4.1.2, to recreate the results of the following...

  16. Biome-BGC: Terrestrial Ecosystem Process Model, Version 4.1.1

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: Biome-BGC is a computer program that estimates fluxes and storage of energy, water, carbon, and nitrogen for the vegetation and soil components of...

  17. Biome-BGC: Terrestrial Ecosystem Process Model, Version 4.1.1

    Data.gov (United States)

    National Aeronautics and Space Administration — Biome-BGC is a computer program that estimates fluxes and storage of energy, water, carbon, and nitrogen for the vegetation and soil components of terrestrial...

  18. BIOME: An Ecosystem Remote Sensor Based on Imaging Interferometry

    Science.gov (United States)

    Peterson, David L.; Hammer, Philip; Smith, William H.; Lawless, James G. (Technical Monitor)

    1994-01-01

    Until recent times, optical remote sensing of ecosystem properties from space has been limited to broad band multispectral scanners such as Landsat and AVHRR. While these sensor data can be used to derive important information about ecosystem parameters, they are very limited for measuring key biogeochemical cycling parameters such as the chemical content of plant canopies. Such parameters, for example the lignin and nitrogen contents, are potentially amenable to measurements by very high spectral resolution instruments using a spectroscopic approach. Airborne sensors based on grating imaging spectrometers gave the first promise of such potential but the recent decision not to deploy the space version has left the community without many alternatives. In the past few years, advancements in high performance deep well digital sensor arrays coupled with a patented design for a two-beam interferometer has produced an entirely new design for acquiring imaging spectroscopic data at the signal to noise levels necessary for quantitatively estimating chemical composition (1000:1 at 2 microns). This design has been assembled as a laboratory instrument and the principles demonstrated for acquiring remote scenes. An airborne instrument is in production and spaceborne sensors being proposed. The instrument is extremely promising because of its low cost, lower power requirements, very low weight, simplicity (no moving parts), and high performance. For these reasons, we have called it the first instrument optimized for ecosystem studies as part of a Biological Imaging and Observation Mission to Earth (BIOME).

  19. Climate control of terrestrial carbon exchange across biomes and continents

    Energy Technology Data Exchange (ETDEWEB)

    Yi Chuixiang; Wolbeck, John; Xu Xiyan [School of Earth and Environmental Sciences, Queens College, City University of New York, NY 11367 (United States); Ricciuto, Daniel [Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 (United States); Li Runze [Department of Statistics, Pennsylvania State University, University Park, PA 16802 (United States); Nilsson, Mats [Department of Forest Ecology, Swedish University of Agricultural Sciences, SE-901 83 Umeaa (Sweden); Aires, Luis [CESAM and Department of Environmental Engineering, School of Technology and Management, Polytechnic Institute of Leiria (Portugal); Albertson, John D [Department of Civil and Environmental Engineering, Duke University, Durham, NC 22708-0287 (United States); Ammann, Christof [Federal Research Station Agroscope Reckenholz-Taenikon, Reckenholzstrasse 191, 8046 Zuerich (Switzerland); Arain, M Altaf [School of Geography and Earth Sciences, McMaster University, Hamilton, ON, L8S 4K1 (Canada); De Araujo, Alessandro C [Instituto Nacional de Pesquisas da Amazonia, Programa LBA, Campus-II, Manaus-Amazonas 69060 (Brazil); Aubinet, Marc [University of Liege, Gembloux Agro-Bio Tech, Unit of Biosystem Physics, 2 Passage des Deportes, 5030 Gembloux (Belgium); Aurela, Mika [Finnish Meteorological Institute, Climate Change Research, FI-00101 Helsinki (Finland); Barcza, Zoltan [Department of Meteorology, Eoetvoes Lorand University, H-1117 Budapest, Pazmany setany 1/A (Hungary); Barr, Alan [Climate Research Division, Environment Canada, Saskatoon, SK, S7N 3H5 (Canada); Berbigier, Paul [INRA, UR1263 EPHYSE, Villenave d' Ornon F-33883 (France); Beringer, Jason [School of Geography and Environmental Science, Monash University, Clayton, Victoria 3800 (Australia); Bernhofer, Christian [Institute of Hydrology and Meteorology, Dresden University of Technology, Pienner Strasse 23, D-01737, Tharandt (Germany)

    2010-07-15

    Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate-carbon cycle feedbacks. However, directly observed relationships between climate and terrestrial CO{sub 2} exchange with the atmosphere across biomes and continents are lacking. Here we present data describing the relationships between net ecosystem exchange of carbon (NEE) and climate factors as measured using the eddy covariance method at 125 unique sites in various ecosystems over six continents with a total of 559 site-years. We find that NEE observed at eddy covariance sites is (1) a strong function of mean annual temperature at mid- and high-latitudes, (2) a strong function of dryness at mid- and low-latitudes, and (3) a function of both temperature and dryness around the mid-latitudinal belt (45 deg. N). The sensitivity of NEE to mean annual temperature breaks down at {approx} 16 deg. C (a threshold value of mean annual temperature), above which no further increase of CO{sub 2} uptake with temperature was observed and dryness influence overrules temperature influence.

  20. Climate control of terrestrial carbon exchange across biomes and continents

    International Nuclear Information System (INIS)

    Yi Chuixiang; Wolbeck, John; Xu Xiyan; Ricciuto, Daniel; Li Runze; Nilsson, Mats; Aires, Luis; Albertson, John D; Ammann, Christof; Arain, M Altaf; De Araujo, Alessandro C; Aubinet, Marc; Aurela, Mika; Barcza, Zoltan; Barr, Alan; Berbigier, Paul; Beringer, Jason; Bernhofer, Christian

    2010-01-01

    Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate-carbon cycle feedbacks. However, directly observed relationships between climate and terrestrial CO 2 exchange with the atmosphere across biomes and continents are lacking. Here we present data describing the relationships between net ecosystem exchange of carbon (NEE) and climate factors as measured using the eddy covariance method at 125 unique sites in various ecosystems over six continents with a total of 559 site-years. We find that NEE observed at eddy covariance sites is (1) a strong function of mean annual temperature at mid- and high-latitudes, (2) a strong function of dryness at mid- and low-latitudes, and (3) a function of both temperature and dryness around the mid-latitudinal belt (45 deg. N). The sensitivity of NEE to mean annual temperature breaks down at ∼ 16 deg. C (a threshold value of mean annual temperature), above which no further increase of CO 2 uptake with temperature was observed and dryness influence overrules temperature influence.

  1. Methodology for maintenance analysis based on hydroelectric power stations reliability; Metodologia para realizar analisis de mantenimiento basado en confiabilidad en centrales hidroelectricas

    Energy Technology Data Exchange (ETDEWEB)

    Rea Soto, Rogelio; Calixto Rodriguez, Roberto; Sandoval Valenzuela, Salvador; Velasco Flores, Rocio; Garcia Lizarraga, Maria del Carmen [Instituto de Investigaciones Electricas, Cuernavaca, Morelos (Mexico)

    2012-07-01

    A methodology to carry out Reliability Centered Maintenance (RCM) studies for hydroelectric power plants is presented. The methodology is an implantation/extension of the guidelines proposed by the Engineering Society for Advanced Mobility Land, Sea and Space in the SAE-JA1012 standard. With the purpose of answering the first five questions, that are set out in that standard, the use of standard ISO14224 is strongly recommended. This approach standardizes failure mechanisms and homogenizes RCM studies with the process of collecting failure and maintenance data. The use of risk matrixes to rank the importance of each failure based on a risk criteria is also proposed. [Spanish] Se presenta una metodologia para realizar estudios de mantenimiento Basado en Confiabilidad (RCM) aplicados a la industria hidroelectrica. La metodologia es una implantacion/ extension realizada por los autores de este trabajo, de los lineamientos propuestos por la Engineering Society for Advanced Mobility Land, Sea and Space en el estandar SAE-JA1012. Para contestar las primeras cinco preguntas del estandar se propone tomar como base los modos y mecanismos de fallas de componentes documentados en la guia para recopilar datos de falla en el estandar ISO-14224. Este enfoque permite estandarizar la descripcion de mecanismos de fallas de los equipos, tanto en el estudio RCM como en el proceso de recopilacion de datos de falla y de mantenimiento, lo que permite retroalimentar el ciclo de mejora continua de los procesos RCM. Tambien se propone el uso de matrices de riesgo para jerarquizar la importancia de los mecanismos de falla con base en el nivel de riesgo.

  2. The phylogeny and biogeography of Hakea (Proteaceae) reveals the role of biome shifts in a continental plant radiation.

    Science.gov (United States)

    Cardillo, Marcel; Weston, Peter H; Reynolds, Zoe K M; Olde, Peter M; Mast, Austin R; Lemmon, Emily M; Lemmon, Alan R; Bromham, Lindell

    2017-08-01

    The frequency of evolutionary biome shifts during diversification has important implications for our ability to explain geographic patterns of plant diversity. Recent studies present several examples of biome shifts, but whether frequencies of biome shifts closely reflect geographic proximity or environmental similarity of biomes remains poorly known. We explore this question by using phylogenomic methods to estimate the phylogeny of Hakea, a diverse Australian genus occupying a wide range of biomes. Model-based estimation of ancestral regions indicates that Hakea began diversifying in the Mediterranean biome of southern Australia in the Middle Eocene-Early Oligocene, and dispersed repeatedly into other biomes across the continent. We infer around 47 shifts between biomes. Frequencies of shifts between pairs of biomes are usually similar to those expected from their geographic connectedness or climatic similarity, but in some cases are substantially higher or lower than expected, perhaps reflecting how readily key physiological traits can be modified to adapt lineages to new environments. The history of frequent biome-shifting is reflected in the structure of present-day assemblages, which tend to be more phylogenetically diverse than null-model expectations. The case of Hakea demonstrates that the radiation of large plant clades across wide geographic areas need not be constrained by dispersal limitation or conserved adaptations to particular environments. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

  3. Biogeochemical cycling in terrestrial ecosystems of the Caatinga Biome.

    Science.gov (United States)

    Menezes, R S C; Sampaio, E V S B; Giongo, V; Pérez-Marin, A M

    2012-08-01

    The biogeochemical cycles of C, N, P and water, the impacts of land use in the stocks and flows of these elements and how they can affect the structure and functioning of Caatinga were reviewed. About half of this biome is still covered by native secondary vegetation. Soils are deficient in nutrients, especially N and P. Average concentrations of total soil P and C in the top layer (0-20 cm) are 196 mg kg(-1) and 9.3 g kg(-1), corresponding to C stocks around 23 Mg ha(-1). Aboveground biomass of native vegetation varies from 30 to 50 Mg ha(-1), and average root biomass from 3 to 12 Mg ha(-1). Average annual productivities and biomass accumulation in different land use systems vary from 1 to 7 Mg ha(-1) year(-1). Biological atmospheric N2 fixation is estimated to vary from 3 to 11 kg N ha(-1) year-1 and 21 to 26 kg N ha(-1) year(-1) in mature and secondary Caatinga, respectively. The main processes responsible for nutrient and water losses are fire, soil erosion, runoff and harvest of crops and animal products. Projected climate changes in the future point to higher temperatures and rainfall decreases. In face of the high intrinsic variability, actions to increase sustainability should improve resilience and stability of the ecosystems. Land use systems based on perennial species, as opposed to annual species, may be more stable and resilient, thus more adequate to face future potential increases in climate variability. Long-term studies to investigate the potential of the native biodiversity or adapted exotic species to design sustainable land use systems should be encouraged.

  4. Does a General Temperature-Dependent Q10 Model of Soil Respiration Exist at Biome and Global Scale?

    Institute of Scientific and Technical Information of China (English)

    Hua CHEN; Han-Qin TIAN

    2005-01-01

    Soil respiration (SR) is commonly modeled by a Q10 (an indicator of temperature sensitivity)function in ecosystem models. Q10is usually treated as a constant of 2 in these models, although Q10 value of SR often decreases with increasing temperatures. It remains unclear whether a general temperaturedependent Q10 model of SR exists at biome and global scale. In this paper, we have compiled the long-term Q10 data of 38 SR studies ranging from the Boreal, Temperate, to Tropical/Subtropical biome on four continents.Our analysis indicated that the general temperature-dependent biome Q10 models of SR existed, especially in the Boreal and Temperate biomes. A single-exponential model was better than a simple linear model in fitting the average Q10 values at the biome scale. Average soil temperature is a better predictor of Q10 value than average air temperature in these models, especially in the Boreal biome. Soil temperature alone could explain about 50% of the Q10 variations in both the Boreal and Temperate biome single-exponential Q10 model. Q10 value of SR decreased with increasing soil temperature but at quite different rates among the three biome Q10 models. The k values (Q10 decay rate constants) were 0.09, 0.07, and 0.02/℃ in the Boreal, Temperate, and Tropical/Subtropical biome, respectively, suggesting that Q10 value is the most sensitive to soil temperature change in the Boreal biome, the second in the Temperate biome, and the least sensitive in the Tropical/Subtropical biome. This also indirectly confirms that acclimation of SR in many soil warming experiments probably occurs. The k value in the "global" single-exponential Q10 model which combined both the Boreal and Temperate biome data set was 0.08/℃. However, the global general temperature-dependent Q10model developed using the data sets of the three biomes is not adequate for predicting Q10 values of SR globally.The existence of the general temperature-dependent Q10 models of SR in the Boreal and

  5. A new methodology for cost-effectiveness studies of domestic radon remediation programmes: Quality-adjusted life-years gained within Primary Care Trusts in Central England

    International Nuclear Information System (INIS)

    Coskeran, Thomas; Denman, Antony; Phillips, Paul; Gillmore, Gavin; Tornberg, Roger

    2006-01-01

    Radon is a naturally occurring radioactive gas, high levels of which are associated with geological formations such as those found in Northamptonshire and North Oxfordshire in the UK. The UK's National Radiological Protection Board have designated both districts as radon Affected Areas. Radiation levels due to radon, therefore, exceed 200 Bq m -3 , the UK's domestic Action Level, in over one percent of domestic properties. Because of radon's radioactivity, exposure to the gas can potentially cause lung cancer, and has been linked to some 2000 deaths a year in the UK. Consequently, when radiation levels exceed the Action Level, remediation against radon's effects is recommended to householders. This study examines the cost-effectiveness of remediation measures in Northamptonshire and North Oxfordshire by estimating cost per quality-adjusted life-year gained in four Primary Care Trusts, organisations that play a key public health policy role in the UK's National Health Service. The study is the first to apply this approach to estimating the cost-effectiveness of radon remediation programmes. Central estimates of cost per quality-adjusted life-year in the four Primary Care Trusts range from Pounds 6143 to Pounds 10 323. These values, when assessed against generally accepted criteria, suggest the remediation programmes in the trusts were cost-effective. Policy suggestions based on the estimates, and designed to improve cost-effectiveness further, are proposed for the four Primary Care Trusts and the UK's National Health Service

  6. Methodology for characterizing the environmental impacts of hydroelectric generating stations : a case study of Farmer Rapids; Methodologie d'acquisition des connaissances pour la gestion environnmentale de centrales hydroelectriques : cas de la centrale Rapides-Farmers, rivieres Gatineau

    Energy Technology Data Exchange (ETDEWEB)

    Lemieux, C.; Renaud, S.; Begin, P.; Belzile, L. [Genivar SEC, Quebec, PQ (Canada); Caumartin, J. [Hydro-Quebec, Montreal, PQ (Canada)

    2006-07-01

    This paper described a novel methodology used to characterize the downstream section of a generating station that was not navigable by boat. The method was used as part of a fish habitat characterization study conducted in the Farmers Rapids area of Quebec. The purpose of the study was to identify the discharges and water levels needed to preserve fish habitats in the region. Initially, experimental fishing was undertaken to locate, validate and characterize fish habitats. Habitat models were then developed using a microhabitat modelling method to establish pertinent discharges and water levels. In order to model areas that were not navigable by boat, discharges released by the generating station were reduced to a minimum to temporarily decrease water levels and expose the river. High definition aerial photography and topographic mapping was conducted. The information obtained from the 2 procedures was then used to describe and map the riverbed substrate as well as the bathymetry and aquatic habitats. A 2D hydrodynamic model was then used to simulate water flows in the area at various discharges. The results of the hydrodynamic models and the habitat models were then used to establish appropriate discharges for optimal fish habitats.

  7. 2008 Co2 Assimilation in Plants: Genome to Biome Gordon Research Conference - August 17-22

    Energy Technology Data Exchange (ETDEWEB)

    James V. Maroney

    2009-08-12

    Formerly entitled 'CO2 Fixation and Metabolism in Green Plants', this long-standing Gordon Research Conference has been held on a triennial basis since 1976. In 1990 the participants decided to alternate between sites in the U.S. and outside the U.S. The 2005 conference was held in Europe at the Centre Paul Langevin in Aussois, France, so the 2008 conference returns to a U.S. site - the University of New England in Biddeford, Maine. The 2008 conference covers basic plant research related to photosynthesis and the subsequent regulation and engineering of carbon assimilation. Approaches that range from post-genomic technologies and systems biology, through to fundamental biochemistry, physiology and molecular biology are integrated within ecological and agronomic contexts. As such, the meeting provides the rare opportunity of a single venue for discussing all aspects of the 'carbon-side' of photosynthesis - from genome to biome. The 2008 conference will include an emphasis on the central role of carbon assimilation by plants for developing new sources of bioenergy and for achieving a carbon-neutral planet. A special characteristic of this conference is its 'intimacy' with approximately 110 conferees, ranging from beginning graduate students and postdoctoral associates to leading senior plant scientists, engaged in open and forward-thinking discussions in an informal, friendly setting. With extended time devoted to discussion, and the encouragement to challenge dogma, it is unlike other meetings in the U.S. or abroad. Another novel feature of the conference is a session devoted to the latest 'hot off the press' findings by both established and early career scientists, picked from the abstracts. Together with an expanded poster discussion in the evening sessions, this session provides an opportunity for early career scientists to present interesting new data and to 'test drive' hypotheses in a collegial atmosphere.

  8. Inferring biome-scale net primary productivity from tree-ring isotopes

    Science.gov (United States)

    Pederson, N.; Levesque, M.; Williams, A. P.; Hobi, M. L.; Smith, W. K.; Andreu-Hayles, L.

    2017-12-01

    Satellite estimates of vegetation growth (net primary productivity; NPP), tree-ring records, and forest inventories indicate that ongoing climate change and rising atmospheric CO2 concentration are altering productivity and carbon storage of forests worldwide. The impact of global change on the trends of NPP, however, remain unknown because of the lack of long-term high-resolution NPP data. For the first time, we tested if annually resolved carbon (δ13C) and oxygen (δ18O) stable isotopes from the cellulose of tree rings from trees in temperate regions could be used as a tool for inferring NPP across spatiotemporal scales. We compared satellite NPP estimates from the moderate-resolution imaging spectroradiometer sensor (MODIS, product MOD17A) and a newly developed global NPP dataset derived from the Global Inventory Modeling and Mapping Studies (GIMMS) dataset to annually resolved tree-ring width and δ13C and δ18O records from four sites along a hydroclimatic gradient in Eastern and Central United States. We found strong correlations across large geographical regions between satellite-derived NPP and tree-ring isotopes that ranged from -0.40 to -0.91. Notably, tree-ring derived δ18O had the strongest relation to climate. The results were consistent among the studied tree species (Quercus rubra and Liriodendron tulipifera) and along the hydroclimatic conditions of our network. Our study indicates that tree-ring isotopes can potentially be used to reconstruct NPP in time and space. As such, our findings represent an important breakthrough for estimating long-term changes in vegetation productivity at the biome scale.

  9. Abiotic and biotic determinants of leaf carbon exchange capacity from tropical to high boreal biomes

    Science.gov (United States)

    Smith, N. G.; Dukes, J. S.

    2016-12-01

    Photosynthesis and respiration on land represent the two largest fluxes of carbon dioxide between the atmosphere and the Earth's surface. As such, the Earth System Models that are used to project climate change are high sensitive to these processes. Studies have found that much of this uncertainty is due to the formulation and parameterization of plant photosynthetic and respiratory capacity. Here, we quantified the abiotic and biotic factors that determine photosynthetic and respiratory capacity at large spatial scales. Specifically, we measured the maximum rate of Rubisco carboxylation (Vcmax), the maximum rate of Ribulose-1,5-bisphosphate regeneration (Jmax), and leaf dark respiration (Rd) in >600 individuals of 98 plant species from the tropical to high boreal biomes of Northern and Central America. We also measured a bevy of covariates including plant functional type, leaf nitrogen content, short- and long-term climate, leaf water potential, plant size, and leaf mass per area. We found that plant functional type and leaf nitrogen content were the primary determinants of Vcmax, Jmax, and Rd. Mean annual temperature and mean annual precipitation were not significant predictors of these rates. However, short-term climatic variables, specifically soil moisture and air temperature over the previous 25 days, were significant predictors and indicated that heat and soil moisture deficits combine to reduce photosynthetic capacity and increase respiratory capacity. Finally, these data were used as a model benchmarking tool for the Community Land Model version 4.5 (CLM 4.5). The benchmarking analyses determined errors in the leaf nitrogen allocation scheme of CLM 4.5. Under high leaf nitrogen levels within a plant type the model overestimated Vcmax and Jmax. This result suggested that plants were altering their nitrogen allocation patterns when leaf nitrogen levels were high, an effect that was not being captured by the model. These data, taken with models in mind

  10. Carbon emission as a function of energy generation in hydroelectric reservoirs in Brazilian dry tropical biome

    International Nuclear Information System (INIS)

    Ometto, Jean P.; Cimbleris, André C.P.; Santos, Marco A. dos; Rosa, Luiz P.; Abe, Donato; Tundisi, José G.; Stech, José L.; Barros, Nathan; Roland, Fábio

    2013-01-01

    Most energy generation globally is fueled by coal and oil, raising concerns about greenhouse gas emissions. Hydroelectric reservoirs are anthropogenic aquatic systems that occur across a wide geographical extent, and, in addition to their importance for energy production, they have the potential to release two important greenhouse gases (GHGs), carbon dioxide and methane. We report results from an extensive study of eight hydroelectric reservoirs located in central and southeastern tropical Brazil. In the Brazilian dry tropical biome reservoirs, emissions (in tons of CO 2 Eq. per MW h) varied from 0.01 to 0.55, and decreased with reservoir age. Total emissions were higher in the reservoir lake when compared to the river downstream the dam; however, emissions per unit area, in the first kilometer of the river after the dam, were higher than that in the reservoir. The results showed, despite higher carbon emissions per energy production in the youngest reservoirs, lower emission from hydroelectric reservoirs from the studied region in relation to thermo electrical supply, fueled by coal or fossil fuel. The ratio emission of GHG per MWh produced is an important parameter in evaluating the service provided by hydroelectric reservoir and for energy planning policies. - Highlights: ► Hydroelectric reservoirs construction is growing worldwide. ► The effect of hydropower reservoir in the carbon cycle is dependent on environment characteristics. ► Carbon emissions per energy production are higher in the youngest tropical savannah reservoirs. ► Methane emissions decrease with reservoir age in tropical savannah reservoirs. ► In general, the effect of hydropower in the carbon cycle is lower than other energy sources

  11. Social wasps (Polistinae from Pampa Biome: South Brazil, Northeastern Argentina and Uruguay

    Directory of Open Access Journals (Sweden)

    Alexandre Somavilla

    2017-08-01

    Full Text Available Abstract. This study aimed to determine social wasps’ species from Pampa Biome. Were examined samples of social wasps from south-central of Rio Grande do Sul state (Brazil, parts of Buenos Aires, Entre Rios, Corrientes, Cordoba, Santa Fé and La Pampa provinces (Argentina and in Uruguay maintained in the Coleção Entomológica de Santa Cruz do Sul (Santa Cruz do Sul-Brazil, American Museum of Natural History (USA, Natural History Museum (London-United Kingdom and Muséum National d’Histoire Naturelle (Paris-France. Thirty species were recorded: Agelaia (01, Brachygastra (01, Mischocyttarus (04, Polistes (15, Polybia (08 and Protonectarina (01. Vespas sociais do Bioma Pampa: sul do Brasil, nordeste da Argentina e Uruguai. Resumo. Este estudo objetivou determinar as espécies de vespas sociais provenientes do Bioma Pampa. Foram examinadas vespas sociais provenientes de coletas da região centro-sul do Rio Grande do Sul (Brasil, parte das províncias de Buenos Aires, Entre Rios, Corrientes, Cordoba, Santa Fé e La Pampa (Argentina e Uruguai depositadas na Coleção Entomológica de Santa Cruz do Sul (Santa Cruz do Sul-Brasil, American Museum of Natural History (Nova Iorque-USA, Natural History Museum (Londres-Reino Unido e Muséum National d’Histoire Naturelle (Paris-França. Trinta espécies foram registradas: Agelaia (01, Brachygastra (01, Mischocyttarus (04, Polistes (15, Polybia (08 e Protonectarina (01.

  12. Expanding the global network of protected areas to save the imperiled mediterranean biome.

    Science.gov (United States)

    Underwood, Emma C; Klausmeyer, Kirk R; Cox, Robin L; Busby, Sylvia M; Morrison, Scott A; Shaw, M Rebecca

    2009-02-01

    : Global goals established by the Convention on Biological Diversity stipulate that 10% of the world's ecological regions must be effectively conserved by 2010. To meet that goal for the mediterranean biome, at least 5% more land must be formally protected over the next few years. Although global assessments identify the mediterranean biome as a priority, without biologically meaningful analysis units, finer-resolution data, and corresponding prioritization analysis, future conservation investments could lead to more area being protected without increasing the representation of unique mediterranean ecosystems. We used standardized analysis units and six potential natural vegetation types stratified by 3 elevation zones in a global gap analysis that systematically explored conservation priorities across the mediterranean biome. The highest levels of protection were in Australia, South Africa, and California-Baja California (from 9-11%), and the lowest levels of protection were in Chile and the mediterranean Basin (biome only one of the six vegetation types--mediterranean shrubland--exceeded 10% protection. The remaining vegetation types--grassland, scrub, succulent dominated, woodland, and forest--each had biome, we identified biodiversity assemblages with 30% conversion and suggest that these assemblages be elevated to high-priority status in future conservation efforts.

  13. Evolutionary biology and anthropology suggest biome reconstitution as a necessary approach toward dealing with immune disorders.

    Science.gov (United States)

    Parker, William; Ollerton, Jeff

    2013-01-01

    Industrialized society currently faces a wide range of non-infectious, immune-related pandemics. These pandemics include a variety of autoimmune, inflammatory and allergic diseases that are often associated with common environmental triggers and with genetic predisposition, but that do not occur in developing societies. In this review, we briefly present the idea that these pandemics are due to a limited number of evolutionary mismatches, the most damaging being 'biome depletion'. This particular mismatch involves the loss of species from the ecosystem of the human body, the human biome, many of which have traditionally been classified as parasites, although some may actually be commensal or even mutualistic. This view, evolved from the 'hygiene hypothesis', encompasses a broad ecological and evolutionary perspective that considers host-symbiont relations as plastic, changing through ecological space and evolutionary time. Fortunately, this perspective provides a blueprint, termed 'biome reconstitution', for disease treatment and especially for disease prevention. Biome reconstitution includes the controlled and population-wide reintroduction (i.e. domestication) of selected species that have been all but eradicated from the human biome in industrialized society and holds great promise for the elimination of pandemics of allergic, inflammatory and autoimmune diseases.

  14. An intercomparison of biogenic emissions estimates from BEIS2 and BIOME: Reconciling the differences

    Energy Technology Data Exchange (ETDEWEB)

    Wilkinson, J.G. [Alpine Geophysics, Pittsburgh, PA (United States); Emigh, R.A. [Alpine Geophysics, Boulder, CO (United States); Pierce, T.E. [Atmospheric Characterization and Modeling Division/NOAA, Research Triangle Park, NC (United States)

    1996-12-31

    Biogenic emissions play a critical role in urban and regional air quality. For instance, biogenic emissions contribute upwards of 76% of the daily hydrocarbon emissions in the Atlanta, Georgia airshed. The Biogenic Emissions Inventory System-Version 2.0 (BEIS2) and the Biogenic Model for Emissions (BIOME) are two models that compute biogenic emissions estimates. BEIS2 is a FORTRAN-based system, and BIOME is an ARC/INFO{reg_sign} - and SAS{reg_sign}-based system. Although the technical formulations of the models are similar, the models produce different biogenic emissions estimates for what appear to be essentially the same inputs. The goals of our study are the following: (1) Determine why BIOME and BEIS2 produce different emissions estimates; (2) Attempt to understand the impacts that the differences have on the emissions estimates; (3) Reconcile the differences where possible; and (4) Present a framework for the use of BEIS2 and BIOME. In this study, we used the Coastal Oxidant Assessment for Southeast Texas (COAST) biogenics data which were supplied to us courtesy of the Texas Natural Resource Conservation Commission (TNRCC), and we extracted the BEIS2 data for the same domain. We compared the emissions estimates of the two models using their respective data sets BIOME Using TNRCC data and BEIS2 using BEIS2 data.

  15. Concluding remarks: overall impacts on biodiversity and future perspectives for conservation in the Pantanal biome.

    Science.gov (United States)

    Alho, C J R

    2011-04-01

    The Pantanal biome is characterised by seasonal flooding which determines specific ecosystem processes, with the occurrence of adapted plants and animals to the annual shrinking and expansion of habitats due to the seasonal hydrological regime. Biodiversity abundance varies during the dry and wet seasons. The Pantanal's biodiversity is a fundamental component of ecosystem services for human society, including nutrient cycling, fish production, ecotourism, carbon storage, flood control, among others, which are relevant to regional and global environmental consequences. The biome has been impacted by the conversion of natural vegetation into agricultural fields and pasture for cattle raising, with alteration and loss of natural habitats and biodiversity. Major negative impacts occur in uplands, with drastic deforestation of savanna vegetation, where main rivers feeding the Pantanal have their springs. This article discusses future needs and priorities for ecological research, in order to better understand the biome's natural system, to achieve conservation and sustainable use.

  16. Concluding remarks: overall impacts on biodiversity and future perspectives for conservation in the Pantanal biome

    Directory of Open Access Journals (Sweden)

    CJR. Alho

    Full Text Available The Pantanal biome is characterised by seasonal flooding which determines specific ecosystem processes, with the occurrence of adapted plants and animals to the annual shrinking and expansion of habitats due to the seasonal hydrological regime. Biodiversity abundance varies during the dry and wet seasons. The Pantanal's biodiversity is a fundamental component of ecosystem services for human society, including nutrient cycling, fish production, ecotourism, carbon storage, flood control, among others, which are relevant to regional and global environmental consequences. The biome has been impacted by the conversion of natural vegetation into agricultural fields and pasture for cattle raising, with alteration and loss of natural habitats and biodiversity. Major negative impacts occur in uplands, with drastic deforestation of savanna vegetation, where main rivers feeding the Pantanal have their springs. This article discusses future needs and priorities for ecological research, in order to better understand the biome's natural system, to achieve conservation and sustainable use.

  17. BOREAS RSS-8 BIOME-BGC Model Simulations at Tower Flux Sites in 1994

    Science.gov (United States)

    Hall, Forrest G. (Editor); Nickeson, Jaime (Editor); Kimball, John

    2000-01-01

    BIOME-BGC is a general ecosystem process model designed to simulate biogeochemical and hydrologic processes across multiple scales (Running and Hunt, 1993). In this investigation, BIOME-BGC was used to estimate daily water and carbon budgets for the BOREAS tower flux sites for 1994. Carbon variables estimated by the model include gross primary production (i.e., net photosynthesis), maintenance and heterotrophic respiration, net primary production, and net ecosystem carbon exchange. Hydrologic variables estimated by the model include snowcover, evaporation, transpiration, evapotranspiration, soil moisture, and outflow. The information provided by the investigation includes input initialization and model output files for various sites in tabular ASCII format.

  18. Where do the treeless tundra areas of northern highlands fit in the global biome system: toward an ecologically natural subdivision of the tundra biome.

    Science.gov (United States)

    Virtanen, Risto; Oksanen, Lauri; Oksanen, Tarja; Cohen, Juval; Forbes, Bruce C; Johansen, Bernt; Käyhkö, Jukka; Olofsson, Johan; Pulliainen, Jouni; Tømmervik, Hans

    2016-01-01

    According to some treatises, arctic and alpine sub-biomes are ecologically similar, whereas others find them highly dissimilar. Most peculiarly, large areas of northern tundra highlands fall outside of the two recent subdivisions of the tundra biome. We seek an ecologically natural resolution to this long-standing and far-reaching problem. We studied broad-scale patterns in climate and vegetation along the gradient from Siberian tundra via northernmost Fennoscandia to the alpine habitats of European middle-latitude mountains, as well as explored those patterns within Fennoscandian tundra based on climate-vegetation patterns obtained from a fine-scale vegetation map. Our analyses reveal that ecologically meaningful January-February snow and thermal conditions differ between different types of tundra. High precipitation and mild winter temperatures prevail on middle-latitude mountains, low precipitation and usually cold winters prevail on high-latitude tundra, and Scandinavian mountains show intermediate conditions. Similarly, heath-like plant communities differ clearly between middle latitude mountains (alpine) and high-latitude tundra vegetation, including its altitudinal extension on Scandinavian mountains. Conversely, high abundance of snowbeds and large differences in the composition of dwarf shrub heaths distinguish the Scandinavian mountain tundra from its counterparts in Russia and the north Fennoscandian inland. The European tundra areas fall into three ecologically rather homogeneous categories: the arctic tundra, the oroarctic tundra of northern heights and mountains, and the genuinely alpine tundra of middle-latitude mountains. Attempts to divide the tundra into two sub-biomes have resulted in major discrepancies and confusions, as the oroarctic areas are included in the arctic tundra in some biogeographic maps and in the alpine tundra in others. Our analyses based on climate and vegetation criteria thus seem to resolve the long-standing biome

  19. Carbon storage in permafrost and soils of the mammoth tundra-steppe biome: role in the global carbon budget

    Science.gov (United States)

    N.S. Zimov; S.A. Zimov; A.E. Zimova; G.M. Zimova; V.I. Chuprynin; F.S. Chapin

    2009-01-01

    During the Last Glacial Maximum (LGM), atmospheric CO2 concentration was 80-100 ppmv lower than in preindustrial times. At that time steppe-tundra was the most extensive biome on Earth. Some authors assume that C storage in that biome was very small, similar to today's deserts, and that the terrestrial carbon (C) reservoir increased at the...

  20. The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome.

    Science.gov (United States)

    McDonald, Daniel; Clemente, Jose C; Kuczynski, Justin; Rideout, Jai Ram; Stombaugh, Jesse; Wendel, Doug; Wilke, Andreas; Huse, Susan; Hufnagle, John; Meyer, Folker; Knight, Rob; Caporaso, J Gregory

    2012-07-12

    We present the Biological Observation Matrix (BIOM, pronounced "biome") format: a JSON-based file format for representing arbitrary observation by sample contingency tables with associated sample and observation metadata. As the number of categories of comparative omics data types (collectively, the "ome-ome") grows rapidly, a general format to represent and archive this data will facilitate the interoperability of existing bioinformatics tools and future meta-analyses. The BIOM file format is supported by an independent open-source software project (the biom-format project), which initially contains Python objects that support the use and manipulation of BIOM data in Python programs, and is intended to be an open development effort where developers can submit implementations of these objects in other programming languages. The BIOM file format and the biom-format project are steps toward reducing the "bioinformatics bottleneck" that is currently being experienced in diverse areas of biological sciences, and will help us move toward the next phase of comparative omics where basic science is translated into clinical and environmental applications. The BIOM file format is currently recognized as an Earth Microbiome Project Standard, and as a Candidate Standard by the Genomic Standards Consortium.

  1. Large-scale impact of climate change vs. land-use change on future biome shifts in Latin America

    NARCIS (Netherlands)

    Boit, Alice; Sakschewski, Boris; Boysen, Lena; Cano-Crespo, Ana; Clement, Jan; Garcia-alaniz, Nashieli; Kok, Kasper; Kolb, Melanie; Langerwisch, Fanny; Rammig, Anja; Sachse, René; Eupen, van Michiel; Bloh, von Werner; Clara Zemp, Delphine; Thonicke, Kirsten

    2016-01-01

    Climate change and land-use change are two major drivers of biome shifts causing habitat and biodiversity loss. What is missing is a continental-scale future projection of the estimated relative impacts of both drivers on biome shifts over the course of this century. Here, we provide such a

  2. Copula Multivariate analysis of Gross primary production and its hydro-environmental driver; A BIOME-BGC model applied to the Antisana páramos

    Science.gov (United States)

    Minaya, Veronica; Corzo, Gerald; van der Kwast, Johannes; Galarraga, Remigio; Mynett, Arthur

    2014-05-01

    Simulations of carbon cycling are prone to uncertainties from different sources, which in general are related to input data, parameters and the model representation capacities itself. The gross carbon uptake in the cycle is represented by the gross primary production (GPP), which deals with the spatio-temporal variability of the precipitation and the soil moisture dynamics. This variability associated with uncertainty of the parameters can be modelled by multivariate probabilistic distributions. Our study presents a novel methodology that uses multivariate Copulas analysis to assess the GPP. Multi-species and elevations variables are included in a first scenario of the analysis. Hydro-meteorological conditions that might generate a change in the next 50 or more years are included in a second scenario of this analysis. The biogeochemical model BIOME-BGC was applied in the Ecuadorian Andean region in elevations greater than 4000 masl with the presence of typical vegetation of páramo. The change of GPP over time is crucial for climate scenarios of the carbon cycling in this type of ecosystem. The results help to improve our understanding of the ecosystem function and clarify the dynamics and the relationship with the change of climate variables. Keywords: multivariate analysis, Copula, BIOME-BGC, NPP, páramos

  3. Genetic structure of Pilosocereus gounellei (Cactaceae) as revealed by AFLP marker to guide proposals for improvement and restoration of degraded areas in Caatinga biome.

    Science.gov (United States)

    Monteiro, E R; Strioto, D K; Meirelles, A C S; Mangolin, C A; Machado, M F P S

    2015-12-15

    Amplified fragment length polymorphism (AFLP) analysis was used to evaluate DNA polymorphism in Pilosocereus gounellei with the aim of differentiating samples grown in different Brazilian semiarid regions. Seven primer pairs were used to amplify 703 AFLP markers, of which 700 (99.21%) markers were polymorphic. The percentage of polymorphic markers ranged from 95.3% for the primer combination E-AAG/M-CTT to 100% for E-ACC/M-CAT, E-ACC/M-CAA, E-AGC/M-CAG, E-ACT/M-CTA, and E-AGG/M-CTG. The largest number of informative markers (126) was detected using the primer combination E-AAC/M-CTA. Polymorphism of the amplified DNA fragments ranged from 72.55% (in sample from Piauí State) to 82.79% (in samples from Rio Grande Norte State), with an average of 75.39%. Despite the high genetic diversity of AFLP markers in xiquexique, analysis using the STRUCTURE software identified relatively homogeneous clusters of xiquexique from the same location, indicating a differentiation at the molecular level, among the plant samples from different regions of the Caatinga biome. The AFLP methodology identified genetically homogeneous and contrasting plants, as well as plants from different regions with common DNA markers. Seeds from such plants can be used for further propagation of plants for establishment of biodiversity conservation units and restoration of degraded areas of the Caatinga biome.

  4. Water balance in paired watersheds with eucalyptus and degraded grassland in Pampa biome

    Science.gov (United States)

    Rangelands of the Pampa biome, which cover regions of Argentina, Uruguay and Brazil (176,496 km2 – 2.07% of Brazilian territory and 63% of Rio Grande do Sul State territory, southern region of Brazil) in South America (total area of 750,000 km2), are being substituted by crops and commercial eucalyp...

  5. Selection of native trees for intercropping with coffee in the Atlantic Rainforest biome

    NARCIS (Netherlands)

    Souza, de H.N.; Cardoso, I.M.; Fernandes, J.M.; Garcia, F.C.P.; Bonfim, V.R.; Santos, A.C.; Carvalho, A.F.; Mendonca, E.S.

    2010-01-01

    A challenge in establishing agroforestry systems is ensuring that farmers are interested in the tree species, and are aware of how to adequately manage these species. This challenge was tackled in the Atlantic Rainforest biome (Brazil), where a participatory trial with agroforestry coffee systems

  6. A new species of Andocaeculus (Acari, Caeculidae) from the Pampa biome, southern Brazil

    OpenAIRE

    Ana Paula Ott; Ricardo Ott

    2014-01-01

    A new caeculid species Andocaeculus caioi sp. nov. is described from Pampa biome in south Brazil. The species of this family are usually large and strong sclerotized mites with robust and spinulose legs I and II. Until now records of species for South America were known only from Chile and Argentina.

  7. Hantavirus pulmonary syndrome and rodent reservoirs in the savanna-like biome of Brazil's southeastern region.

    Science.gov (United States)

    Limongi, J E; Oliveira, R C; Guterres, A; Costa Neto, S F; Fernandes, J; Vicente, L H B; Coelho, M G; Ramos, V N; Ferreira, M S; Bonvicino, C R; D'Andrea, P S; Lemos, E R S

    2016-04-01

    This paper describes the diversity of rodent fauna in an area endemic for hantavirus cardiopulmonary syndrome (HCPS) in Brazil, the population dynamics and the relationship of rodents with hantavirus in the Cerrado (savanna-like) biome. Additionally, an analysis is made of the partial S segment sequences of the hantaviruses obtained from serologically confirmed human HCPS cases and from rodent specimens. Rodents were collected during four campaigns. Human serum samples were collected from suspected cases of HCPS at hospitals in the state of Minas Gerais. The samples antibody-reactive by ELISA were processed by RT-PCR. The PCR product was amplified and sequenced. Hantavirus was detected only in Necromys lasiurus, the wild rodent species most prevalent in the Cerrado biome (min-max: 50-83·7%). All the six human serum samples were hantavirus seropositive and five showed amplified PCR products. The analysis of the nucleotide sequences showed the circulation of a single genotype, the Araraquara hantavirus. The environmental changes that have occurred in the Cerrado biome in recent decades have favoured N. lasiurus in interspecific competition of habitats, thus increasing the risk of contact between humans and rodent species infected with hantavirus. Our data corroborate the definition of N. lasiurus as the main hantavirus reservoir in the Cerrado biome.

  8. Extreme precipitation patterns and reductions of terrestrial ecosystem production across biomes

    Science.gov (United States)

    Yongguang Zhang; M. Susan Moran; Mark A. Nearing; Guillermo E. Ponce Campos; Alfredo R. Huete; Anthony R. Buda; David D. Bosch; Stacey A. Gunter; Stanley G. Kitchen; W. Henry McNab; Jack A. Morgan; Mitchel P. McClaran; Diane S. Montoya; Debra P.C. Peters; Patrick J. Starks

    2013-01-01

    Precipitation regimes are predicted to shift to more extreme patterns that are characterized by more heavy rainfall events and longer dry intervals, yet their ecological impacts on vegetation production remain uncertain across biomes in natural climatic conditions. This in situ study investigated the effects of these climatic conditions on aboveground net primary...

  9. The Biome Project: Developing a Legitimate Parallel Curriculum for Physical Education and Life Sciences

    Science.gov (United States)

    Hastie, Peter Andrew

    2013-01-01

    The purpose of this article is to describe the outcomes of a parallel curriculum project between life sciences and physical education. Throughout a 6-week period, students in grades two through five became members of teams that represented different animal species and biomes, and concurrently participated in a season of gymnastics skills and…

  10. Guide to the literature on research in the grassland biome of South Africa

    CSIR Research Space (South Africa)

    Tainton, MN

    1984-12-01

    Full Text Available the development of an understanding of how these communities can best be managed to ensure their sustained producti¬vity, or indeed to increase their productivity. This publication serves to highlight the main work which has been undertaken in this biome...

  11. Remotely sensed vegetation phenology for describing and predicting the biomes of South Africa

    CSIR Research Space (South Africa)

    Wessels, Konrad J

    2011-02-01

    Full Text Available the distribution of the recently redefined biomes be predicted based on remotely sensed, phenology and productivity metrics? Ten-day, 1 km, NDVI AVHRR were analysed for the period 1985 to 2000. Phenological metrics such as start, end and length of the growing...

  12. Modeling Carbon and Water Budgets in the Lushi Basin with Biome-BGC

    Institute of Scientific and Technical Information of China (English)

    Dong Wenjuan; Qi Ye; Li Huimin; Zhou Dajie; Shi Duanhua; Sun Liying

    2005-01-01

    In this article, annual evapotranspiration (ET) and net primary productivity (NPP) of four types of vegetation were estimated for the Lushi basin,a subbasin of the Yellow River in China. These four vegetation types include: deciduous broadleaf forest,evergreen needle leaf forest, dwarf shrub and grass.Biome-BGC--a biogeochemical process model was used to calculate annual ET and NPP for each vegetation type in the study area from 1954 to 2000.Daily microclimate data of 47 years monitored by Lushi meteorological station was extrapolated to cover the basin using MT-CLIM, a mountain microclimate simulator. The output files of MTCLIM were used to feed Biome-BGC. We used average ecophysiological values of each type of vegetation supplied by Numerical Terradynamic Simulation Group (NTSG) in the University of Montana as input ecophysiological constants file.The estimates of daily NPP in early July and annual ET on these four biome groups were compared respectively with field measurements and other studies.Daily gross primary production (GPP) of evergreen needle leaf forest measurements were very dose to the output of Biome-BGC, but measurements of broadleaf forest and dwarf shrub were much smaller than the simulation result. Simulated annual ET and NPP had a significant correlation with precipitation,indicating precipitation is the major environmental factor affecting ET and NPP in the study area.Precipitation also is the key climatic factor for the interannual ET and NPP variations.

  13. Global negative vegetation feedback to climate warming responses of leaf litter decomposition rates in cold biomes.

    NARCIS (Netherlands)

    Cornelissen, J.H.C.; van Bodegom, P.M.; Aerts, R.; Gallaghan, T.V.; van Logtestijn, R.S.P; Alatalo, J.; Chapin, F.S. III; Gerdol, R.; Gudmundsson, J.; Gwynn-Jones, D.; Hartley, A.E.; Hik, D.S.; Hofgaard, A.; Jonsdottir, I.S.; Karlsson, S.; Klein, J.A.; Laundre, J.; Magnusson, B.; Michelsel, A.; Molau, U.; Onipchenko, V.G.; Quested, H.M.; Sandvik, S.M.; Schmidt, I.K.; Shaver, G.R.; Solhleim, B.; Soudzilovskaia, N.A.; Stenstrom, A.; Tolvanen, A.; Totland, O.; Wada, N.; Welker, J.M.; Zhao, X.; Team, M.O.L.

    2007-01-01

    Whether climate change will turn cold biomes from large long-term carbon sinks into sources is hotly debated because of the great potential for ecosystem-mediated feedbacks to global climate. Critical are the direction, magnitude and generality of climate responses of plant litter decomposition.

  14. The freezer defrosting: global warming and litter decomposition rates in cold biomes. Essay review.

    NARCIS (Netherlands)

    Aerts, R.

    2006-01-01

    1 Decomposition of plant litter, a key component of the global carbon budget, is hierarchically controlled by the triad: climate > litter quality > soil organisms. Given the sensitivity of decomposition to temperature, especially in cold biomes, it has been hypothesized that global warming will lead

  15. Pollen-based biome reconstructions for Colombia at 3000, 6000, 15 000 and 18 000 14C yr ago : Late Quaternary tropical vegetation dynamics

    NARCIS (Netherlands)

    Marchant, R.; Behling, H.; Berrío, J.C.; Cleef, A.M.; Duivenvoorden, J.; Hooghiemstra, H.; Kuhry, P.; Melief, B.; Schreve-Brinkman, E.; Geel, van B.; Hammen, van der T.; Reenen, van G.

    2002-01-01

    Colombian biomes are reconstructed at 45 sites from the modern period extending to the Last Glacial Maximum (LGM). The basis for our reconstruction is pollen data assigned to plant functional types and biomes at six 3000-yr intervals. A reconstruction of modern biomes is used to check the treatment

  16. Estimating 40 years of nitrogen deposition in global biomes using the SCIAMACHY NO2 column

    Science.gov (United States)

    Lu, Xuehe; Zhang, Xiuying; Liu, Jinxun; Jin, Jiaxin

    2016-01-01

    Owing to human activity, global nitrogen (N) cycles have been altered. In the past 100 years, global N deposition has increased. Currently, the monitoring and estimating of N deposition and the evaluation of its effects on global carbon budgets are the focus of many researchers. NO2 columns retrieved by space-borne sensors provide us with a new way of exploring global N cycles and these have the ability to estimate N deposition. However, the time range limitation of NO2 columns makes the estimation of long timescale N deposition difficult. In this study we used ground-based NOx emission data to expand the density of NO2columns, and 40 years of N deposition (1970–2009) was inverted using the multivariate linear model with expanded NO2 columns. The dynamic of N deposition was examined in both global and biome scales. The results show that the average N deposition was 0.34 g N m–2 year–1 in the 2000s, which was an increase of 38.4% compared with the 1970s’. The total N deposition in different biomes is unbalanced. N deposition is only 38.0% of the global total in forest biomes; this is made up of 25.9%, 11.3, and 0.7% in tropical, temperate, and boreal forests, respectively. As N-limited biomes, there was little increase of N deposition in boreal forests. However, N deposition has increased by a total of 59.6% in tropical forests and croplands, which are N-rich biomes. Such characteristics may influence the effects on global carbon budgets.

  17. Forest carbon emissions from cropland expansion in the Brazilian Cerrado biome

    Science.gov (United States)

    Noojipady, Praveen; Morton, C. Douglas; Macedo, N. Marcia; Victoria, C. Daniel; Huang, Chengquan; Gibbs, K. Holly; Edson Bolfe, L.

    2017-02-01

    Land use, land use change, and forestry accounted for two-thirds of Brazil’s greenhouse gas emissions profile in 2005. Amazon deforestation has declined by more than 80% over the past decade, yet Brazil’s forests extend beyond the Amazon biome. Rapid expansion of cropland in the neighboring Cerrado biome has the potential to undermine climate mitigation efforts if emissions from dry forest and woodland conversion negate some of the benefits of avoided Amazon deforestation. Here, we used satellite data on cropland expansion, forest cover, and vegetation carbon stocks to estimate annual gross forest carbon emissions from cropland expansion in the Cerrado biome. Nearly half of the Cerrado met Brazil’s definition of forest cover in 2000 (≥0.5 ha with ≥10% canopy cover). In areas of established crop production, conversion of both forest and non-forest Cerrado formations for cropland declined during 2003-2013. However, forest carbon emissions from cropland expansion increased over the past decade in Matopiba, a new frontier of agricultural production that includes portions of Maranhão, Tocantins, Piauí, and Bahia states. Gross carbon emissions from cropland expansion in the Cerrado averaged 16.28 Tg C yr-1 between 2003 and 2013, with forest-to-cropland conversion accounting for 29% of emissions. The fraction of forest carbon emissions from Matopiba was much higher; between 2010-2013, large-scale cropland conversion in Matopiba contributed 45% of total Cerrado forest carbon emissions. Carbon emissions from Cerrado-to-cropland transitions offset 5%-7% of the avoided emissions from reduced Amazon deforestation rates during 2011-2013. Comprehensive national estimates of forest carbon fluxes, including all biomes, are critical to detect cross-biome leakage within countries and achieve climate mitigation targets to reduce emissions from land use, land use change, and forestry.

  18. Temporal Changes in Coupled Vegetation Phenology and Productivity are Biome-Specific in the Northern Hemisphere

    Directory of Open Access Journals (Sweden)

    Lanhui Wang

    2017-12-01

    Full Text Available Global warming has greatly stimulated vegetation growth through both extending the growing season and promoting photosynthesis in the Northern Hemisphere (NH. Analyzing the combined dynamics of such trends can potentially improve our current understanding on changes in vegetation functioning and the complex relationship between anthropogenic and climatic drivers. This study aims to analyze the relationships (long-term trends and correlations of length of vegetation growing season (LOS and vegetation productivity assessed by the growing season NDVI integral (GSI in the NH (>30°N to study any dependency of major biomes that are characterized by different imprint from anthropogenic influence. Spatial patterns of converging/diverging trends in LOS and GSI and temporal changes in the coupling between LOS and GSI are analyzed for major biomes at hemispheric and continental scales from the third generation Global Inventory Monitoring and Modeling Studies (GIMMS Normalized Difference Vegetation Index (NDVI dataset for a 32-year period (1982–2013. A quarter area of the NH is covered by converging trends (consistent significant trends in LOS and GSI, whereas diverging trends (opposing significant trends in LOS and GSI cover about 6% of the region. Diverging trends are observed mainly in high latitudes and arid/semi-arid areas of non-forest biomes (shrublands, savannas, and grasslands, whereas forest biomes and croplands are primarily characterized by converging trends. The study shows spatially-distinct and biome-specific patterns between the continental land masses of Eurasia (EA and North America (NA. Finally, areas of high positive correlation between LOS and GSI showed to increase during the period of analysis, with areas of significant positive trends in correlation being more widespread in NA as compared to EA. The temporal changes in the coupled vegetation phenology and productivity suggest complex relationships and interactions that are induced

  19. Aura-biomes are present in the water layer above coral reef benthic macro-organisms.

    Science.gov (United States)

    Walsh, Kevin; Haggerty, J Matthew; Doane, Michael P; Hansen, John J; Morris, Megan M; Moreira, Ana Paula B; de Oliveira, Louisi; Leomil, Luciana; Garcia, Gizele D; Thompson, Fabiano; Dinsdale, Elizabeth A

    2017-01-01

    As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1) the coral Mussismilia braziliensis , (2) fleshy macroalgae ( Stypopodium , Dictota and Canistrocarpus ), (3) turf algae, and (4) the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific "aura-biome". The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria , Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms.

  20. Forgotten forests - issues and prospects in biome mapping using Seasonally Dry Tropical Forests as a case study

    Science.gov (United States)

    2011-01-01

    Background South America is one of the most species diverse continents in the world. Within South America diversity is not distributed evenly at both local and continental scales and this has led to the recognition of various areas with unique species assemblages. Several schemes currently exist which divide the continental-level diversity into large species assemblages referred to as biomes. Here we review five currently available biome maps for South America, including the WWF Ecoregions, the Americas basemap, the Land Cover Map of South America, Morrone's Biogeographic regions of Latin America, and the Ecological Systems Map. The comparison is performed through a case study on the Seasonally Dry Tropical Forest (SDTF) biome using herbarium data of habitat specialist species. Results Current biome maps of South America perform poorly in depicting SDTF distribution. The poor performance of the maps can be attributed to two main factors: (1) poor spatial resolution, and (2) poor biome delimitation. Poor spatial resolution strongly limits the use of some of the maps in GIS applications, especially for areas with heterogeneous landscape such as the Andes. Whilst the Land Cover Map did not suffer from poor spatial resolution, it showed poor delimitation of biomes. The results highlight that delimiting structurally heterogeneous vegetation is difficult based on remote sensed data alone. A new refined working map of South American SDTF biome is proposed, derived using the Biome Distribution Modelling (BDM) approach where georeferenced herbarium data is used in conjunction with bioclimatic data. Conclusions Georeferenced specimen data play potentially an important role in biome mapping. Our study shows that herbarium data could be used as a way of ground-truthing biome maps in silico. The results also illustrate that herbarium data can be used to model vegetation maps through predictive modelling. The BDM approach is a promising new method in biome mapping, and could be

  1. Forgotten forests--issues and prospects in biome mapping using Seasonally Dry Tropical Forests as a case study.

    Science.gov (United States)

    Särkinen, Tiina; Iganci, João R V; Linares-Palomino, Reynaldo; Simon, Marcelo F; Prado, Darién E

    2011-11-24

    South America is one of the most species diverse continents in the world. Within South America diversity is not distributed evenly at both local and continental scales and this has led to the recognition of various areas with unique species assemblages. Several schemes currently exist which divide the continental-level diversity into large species assemblages referred to as biomes. Here we review five currently available biome maps for South America, including the WWF Ecoregions, the Americas basemap, the Land Cover Map of South America, Morrone's Biogeographic regions of Latin America, and the Ecological Systems Map. The comparison is performed through a case study on the Seasonally Dry Tropical Forest (SDTF) biome using herbarium data of habitat specialist species. Current biome maps of South America perform poorly in depicting SDTF distribution. The poor performance of the maps can be attributed to two main factors: (1) poor spatial resolution, and (2) poor biome delimitation. Poor spatial resolution strongly limits the use of some of the maps in GIS applications, especially for areas with heterogeneous landscape such as the Andes. Whilst the Land Cover Map did not suffer from poor spatial resolution, it showed poor delimitation of biomes. The results highlight that delimiting structurally heterogeneous vegetation is difficult based on remote sensed data alone. A new refined working map of South American SDTF biome is proposed, derived using the Biome Distribution Modelling (BDM) approach where georeferenced herbarium data is used in conjunction with bioclimatic data. Georeferenced specimen data play potentially an important role in biome mapping. Our study shows that herbarium data could be used as a way of ground-truthing biome maps in silico. The results also illustrate that herbarium data can be used to model vegetation maps through predictive modelling. The BDM approach is a promising new method in biome mapping, and could be particularly useful for mapping

  2. Forgotten forests - issues and prospects in biome mapping using Seasonally Dry Tropical Forests as a case study

    Directory of Open Access Journals (Sweden)

    Särkinen Tiina

    2011-11-01

    Full Text Available Abstract Background South America is one of the most species diverse continents in the world. Within South America diversity is not distributed evenly at both local and continental scales and this has led to the recognition of various areas with unique species assemblages. Several schemes currently exist which divide the continental-level diversity into large species assemblages referred to as biomes. Here we review five currently available biome maps for South America, including the WWF Ecoregions, the Americas basemap, the Land Cover Map of South America, Morrone's Biogeographic regions of Latin America, and the Ecological Systems Map. The comparison is performed through a case study on the Seasonally Dry Tropical Forest (SDTF biome using herbarium data of habitat specialist species. Results Current biome maps of South America perform poorly in depicting SDTF distribution. The poor performance of the maps can be attributed to two main factors: (1 poor spatial resolution, and (2 poor biome delimitation. Poor spatial resolution strongly limits the use of some of the maps in GIS applications, especially for areas with heterogeneous landscape such as the Andes. Whilst the Land Cover Map did not suffer from poor spatial resolution, it showed poor delimitation of biomes. The results highlight that delimiting structurally heterogeneous vegetation is difficult based on remote sensed data alone. A new refined working map of South American SDTF biome is proposed, derived using the Biome Distribution Modelling (BDM approach where georeferenced herbarium data is used in conjunction with bioclimatic data. Conclusions Georeferenced specimen data play potentially an important role in biome mapping. Our study shows that herbarium data could be used as a way of ground-truthing biome maps in silico. The results also illustrate that herbarium data can be used to model vegetation maps through predictive modelling. The BDM approach is a promising new method in

  3. Invasion of a Legume Ecosystem Engineer in a Cold Biome Alters Plant Biodiversity

    Directory of Open Access Journals (Sweden)

    Vanessa M. S. Vetter

    2018-06-01

    Full Text Available Plant ecosystem engineers are widely used to combat land degradation. However, the ability of those plants to modulate limiting abiotic and biotic resources of other species can cause damage to ecosystems in which they become invasive. Here, we use Lupinus nootkatensis as example to estimate and project the hazardous potential of nitrogen fixing herbaceous plants in a sub-polar oceanic climate. L. nootkatensis was introduced to Iceland in the 1940s to address erosion problems and foster reforestation, but subsequently became a high-latitude invader. In a local field survey, we quantified the impact of L. nootkatensis invasion at three different cover levels (0, 10–50, and 51–100% upon native plant diversity, richness, and community composition of heath-, wood-, and grasslands using a pairwise comparison design and comparisons of means. Afterward, we scaled impacts up to the ecosystem and landscape level by relating occurrences of L. nootkatensis to environmental and human-mediated variables across Iceland using a species distribution model. Plant diversity was significantly deteriorated under high lupine cover levels of the heath- and woodland, but not in the grassland. Plant species richness of the most diverse habitat, the heathland, linearly decreased with lupine cover level. The abundance of small rosettes, cushion plants, orchids, and small woody long-lived plants of the heath declined with invader presence, while the abundance of late successional species and widespread nitrophilous ruderals in wood- and grasslands increased. Distribution modeling revealed 13.3% of Iceland’s land surface area to be suitable lupine habitat. Until 2061–2080, this area will more than double and expand significantly into the Central Highlands due to human mediation and increasingly favorable climatic conditions. Species-rich habitats showed a loss of plant species diversity and richness as well as a change in community composition even in low lupine

  4. On methodology

    DEFF Research Database (Denmark)

    Cheesman, Robin; Faraone, Roque

    2002-01-01

    This is an English version of the methodology chapter in the authors' book "El caso Berríos: Estudio sobre información errónea, desinformación y manipulación de la opinión pública".......This is an English version of the methodology chapter in the authors' book "El caso Berríos: Estudio sobre información errónea, desinformación y manipulación de la opinión pública"....

  5. The Biological Observation Matrix (BIOM format or: how I learned to stop worrying and love the ome-ome

    Directory of Open Access Journals (Sweden)

    McDonald Daniel

    2012-07-01

    Full Text Available Abstract Background We present the Biological Observation Matrix (BIOM, pronounced “biome” format: a JSON-based file format for representing arbitrary observation by sample contingency tables with associated sample and observation metadata. As the number of categories of comparative omics data types (collectively, the “ome-ome” grows rapidly, a general format to represent and archive this data will facilitate the interoperability of existing bioinformatics tools and future meta-analyses. Findings The BIOM file format is supported by an independent open-source software project (the biom-format project, which initially contains Python objects that support the use and manipulation of BIOM data in Python programs, and is intended to be an open development effort where developers can submit implementations of these objects in other programming languages. Conclusions The BIOM file format and the biom-format project are steps toward reducing the “bioinformatics bottleneck” that is currently being experienced in diverse areas of biological sciences, and will help us move toward the next phase of comparative omics where basic science is translated into clinical and environmental applications. The BIOM file format is currently recognized as an Earth Microbiome Project Standard, and as a Candidate Standard by the Genomic Standards Consortium.

  6. Future changes in South American biomass distributions, biome distributions and plant trait spectra is dependent on applied atmospheric forcings.

    Science.gov (United States)

    Langan, Liam; Scheiter, Simon; Higgins, Steven

    2017-04-01

    It remains poorly understood why the position of the forest-savanna biome boundary, in a domain defined by precipitation and temperature, differs in South America, Africa and Australia. Process based Dynamic Global Vegetation Models (DGVMs) are a valuable tool to investigate the determinants of vegetation distributions, however, many DGVMs fail to predict the spatial distribution or indeed presence of the South American savanna biome. Evidence suggests fire plays a significant role in mediating forest-savanna biome boundaries, however, fire alone appear to be insufficient to predict these boundaries in South America. We hypothesize that interactions between precipitation, constraints on tree rooting depth and fire, affect the probability of savanna occurrence and the position of the savanna-forest boundary. We tested our hypotheses at tropical forest and savanna sites in Brazil and Venezuela using a novel DGVM, aDGVM2, which allows plant trait spectra, constrained by trade-offs between traits, to evolve in response to abiotic and biotic conditions. Plant hydraulics is represented by the cohesion-tension theory, this allowed us to explore how soil and plant hydraulics control biome distributions and plant traits. The resulting community trait distributions are emergent properties of model dynamics. We showed that across much of South America the biome state is not determined by climate alone. Interactions between tree rooting depth, fire and precipitation affected the probability of observing a given biome state and the emergent traits of plant communities. Simulations where plant rooting depth varied in space provided the best match to satellite derived biomass estimates and generated biome distributions that reproduced contemporary biome maps well. Future projections showed that biomass distributions, biome distributions and plant trait spectra will change, however, the magnitude of these changes are highly dependent on the applied atmospheric forcings.

  7. Remote Sensing of the Urban Heat Island Effect Across Biomes in the Continental USA

    Science.gov (United States)

    Imhoff, Marc L.; Zhang, Ping; Wolfe, Robert E.; Bounoua, Lahouari

    2010-01-01

    Impervious surface area (ISA) from the Landsat TM-based NLCD 2001 dataset and land surface temperature (LST) from MODIS averaged over three annual cycles (2003-2005) are used in a spatial analysis to assess the urban heat island (UHI) skin temperature amplitude and its relationship to development intensity, size, and ecological setting for 38 of the most populous cities in the continental United States. Development intensity zones based on %ISA are defined for each urban area emanating outward from the urban core to the nonurban rural areas nearby and used to stratify sampling for land surface temperatures and NDVI. Sampling is further constrained by biome and elevation to insure objective intercomparisons between zones and between cities in different biomes permitting the definition of hierarchically ordered zones that are consistent across urban areas in different ecological setting and across scales. We find that ecological context significantly influences the amplitude of summer daytime UHI (urban-rural temperature difference) the largest (8 C average) observed for cities built in biomes dominated by temperate broadleaf and mixed forest. For all cities combined, ISA is the primary driver for increase in temperature explaining 70% of the total variance in LST. On a yearly average, urban areas are substantially warmer than the non-urban fringe by 2.9 C, except for urban areas in biomes with arid and semiarid climates. The average amplitude of the UHI is remarkably asymmetric with a 4.3 C temperature difference in summer and only 1.3 C in winter. In desert environments, the LST's response to ISA presents an uncharacteristic "U-shaped" horizontal gradient decreasing from the urban core to the outskirts of the city and then increasing again in the suburban to the rural zones. UHI's calculated for these cities point to a possible heat sink effect. These observational results show that the urban heat island amplitude both increases with city size and is seasonally

  8. Anticipating Central Asian Water Stress: Variation in River Flow Dependency on Melt Waters from Alpine to Plains in the Remote Tien Shan Range, Kyrgyzstan Using a Rapid Hydro Assessment Methodology

    Science.gov (United States)

    Hill, A. F.; Wilson, A. M.; Williams, M. W.

    2016-12-01

    The future of mountain water resources in High Asia is of high interest to water managers, development organizations and policy makers given large populations downstream reliant on snow and ice sourced river flow. Together with historical and cultural divides among ex-Soviet republics, a lack of central water management following the Soviet break-up has led to water stress as trans-boundary waters weave through and along borders. New upstream hydropower development, a thirsty downstream agricultural sector and a shrinking Aral Sea has led to increasing tension in the region. Despite these pressures and in contrast to eastern High Asia's Himalayan basins (Ganges, Brahmaputra), little attention has been given to western High Asia draining the Pamir and Tien Shan ranges (Syr Darya and Amu Darya basins) to better understand the hydrology of this vast and remote area. Difficult access and challenging terrain exacerbate challenges to working in this remote mountain region. As part of the Contributions to High Asia Runoff from Ice and Snow (CHARIS) project, we asked how does river flow source water composition change over an alpine-to-plains domain of Kyrgyzstan's Naryn River in the Syr Darya basin? In addition, what may the future hold for river flow in Central Asia given the differing responses of snow and ice to climate changes? Utilizing a Rapid Hydrologic Assessment methodology including a suite of pre-field mapping techniques we collected in situ water chemistry data at targeted, remote mountain sites over 450km of the Naryn River over an elevation gradient from glacial headwaters to the lower lying areas - places where people, hydropower and agriculture utilize water. Chemical and isotope tracers were used to separate stream flow to understand relative dependency on melt waters as the river moves downstream from glaciers and snow covered areas. This case study demonstrates a technique to acquire field data over large scales in remote regions that facilitates

  9. Microbial Diversity in Cerrado Biome (Neotropical Savanna Soils.

    Directory of Open Access Journals (Sweden)

    Alinne Pereira de Castro

    Full Text Available The Cerrado, the largest savanna region in South America, is located in central Brazil. Cerrado physiognomies, which range from savanna grasslands to forest formations, combined with the highly weathered, acidic clay Cerrado soils form a unique ecoregion. In this study, high-throughput sequencing of ribosomal RNA genes was combined with shotgun metagenomic analysis to explore the taxonomic composition and potential functions of soil microbial communities in four different vegetation physiognomies during both dry and rainy seasons. Our results showed that changes in bacterial, archaeal, and fungal community structures in cerrado denso, cerrado sensu stricto, campo sujo, and gallery forest soils strongly correlated with seasonal patterns of soil water uptake. The relative abundance of AD3, WPS-2, Planctomycetes, Thermoprotei, and Glomeromycota typically decreased in the rainy season, whereas the relative abundance of Proteobacteria and Ascomycota increased. In addition, analysis of shotgun metagenomic data revealed a significant increase in the relative abundance of genes associated with iron acquisition and metabolism, dormancy, and sporulation during the dry season, and an increase in the relative abundance of genes related to respiration and DNA and protein metabolism during the rainy season. These gene functional categories are associated with adaptation to water stress. Our results further the understanding of how tropical savanna soil microbial communities may be influenced by vegetation covering and temporal variations in soil moisture.

  10. Methodological guidelines

    International Nuclear Information System (INIS)

    Halsnaes, K.; Callaway, J.M.; Meyer, H.J.

    1999-01-01

    The guideline document establishes a general overview of the main components of climate change mitigation assessment. This includes an outline of key economic concepts, scenario structure, common assumptions, modelling tools and country study assumptions. The guidelines are supported by Handbook Reports that contain more detailed specifications of calculation standards, input assumptions and available tools. The major objectives of the project have been provided a methodology, an implementing framework and a reporting system which countries can follow in meeting their future reporting obligations under the FCCC and for GEF enabling activities. The project builds upon the methodology development and application in the UNEP National Abatement Coasting Studies (UNEP, 1994a). The various elements provide countries with a road map for conducting climate change mitigation studies and submitting national reports as required by the FCCC. (au) 121 refs

  11. Methodological guidelines

    Energy Technology Data Exchange (ETDEWEB)

    Halsnaes, K.; Callaway, J.M.; Meyer, H.J.

    1999-04-01

    The guideline document establishes a general overview of the main components of climate change mitigation assessment. This includes an outline of key economic concepts, scenario structure, common assumptions, modelling tools and country study assumptions. The guidelines are supported by Handbook Reports that contain more detailed specifications of calculation standards, input assumptions and available tools. The major objectives of the project have been provided a methodology, an implementing framework and a reporting system which countries can follow in meeting their future reporting obligations under the FCCC and for GEF enabling activities. The project builds upon the methodology development and application in the UNEP National Abatement Coasting Studies (UNEP, 1994a). The various elements provide countries with a road map for conducting climate change mitigation studies and submitting national reports as required by the FCCC. (au) 121 refs.

  12. Estimation of Carbon Flux of Forest Ecosystem over Qilian Mountains by BIOME-BGC Model

    Science.gov (United States)

    Yan, Min; Tian, Xin; Li, Zengyuan; Chen, Erxue; Li, Chunmei

    2014-11-01

    The gross primary production (GPP) and net ecosystem exchange (NEE) are important indicators for carbon fluxes. This study aims at evaluating the forest GPP and NEE over the Qilian Mountains using meteorological, remotely sensed and other ancillary data at large scale. To realize this, the widely used ecological-process-based model, Biome-BGC, and remote-sensing-based model, MODIS GPP algorithm, were selected for the simulation of the forest carbon fluxes. The combination of these two models was based on calibrating the Biome-BGC by the optimized MODIS GPP algorithm. The simulated GPP and NEE values were evaluated against the eddy covariance observed GPPs and NEEs, and the well agreements have been reached, with R2=0.76, 0.67 respectively.

  13. Candidatus Rickettsia andeanae, a spotted fever group agent infecting Amblyomma parvum ticks in two Brazilian biomes

    Directory of Open Access Journals (Sweden)

    Fernanda Aparecida Nieri-Bastos

    2014-04-01

    Full Text Available Adult ticks of the species Amblyomma parvum were collected from the vegetation in the Pantanal biome (state of Mato Grosso do Sul and from horses in the Cerrado biome (state of Piauí in Brazil. The ticks were individually tested for rickettsial infection via polymerase chain reaction (PCR targeting three rickettsial genes, gltA, ompA and ompB. Overall, 63.5% (40/63 and 66.7% (2/3 of A. parvum ticks from Pantanal and Cerrado, respectively, contained rickettsial DNA, which were all confirmed by DNA sequencing to be 100% identical to the corresponding fragments of the gltA, ompA and ompB genes of Candidatus Rickettsia andeanae. This report is the first to describe Ca. R. andeanae in Brazil.

  14. Ecological consequences of the expansion of N2-fixing plants in cold biomes

    Science.gov (United States)

    Hiltbrunner, Erika; Aerts, Rien; Bühlmann, Tobias; Huss-Danell, Kerstin; Magnusson, Borgthor; Myrold, David D.; Reed, Sasha C.; Sigurdsson, Bjarni D.; Körner, Christian

    2014-01-01

    Research in warm-climate biomes has shown that invasion by symbiotic dinitrogen (N2)-fixing plants can transform ecosystems in ways analogous to the transformations observed as a consequence of anthropogenic, atmospheric nitrogen (N) deposition: declines in biodiversity, soil acidification, and alterations to carbon and nutrient cycling, including increased N losses through nitrate leaching and emissions of the powerful greenhouse gas nitrous oxide (N2O). Here, we used literature review and case study approaches to assess the evidence for similar transformations in cold-climate ecosystems of the boreal, subarctic and upper montane-temperate life zones. Our assessment focuses on the plant genera Lupinus and Alnus, which have become invasive largely as a consequence of deliberate introductions and/or reduced land management. These cold biomes are commonly located in remote areas with low anthropogenic N inputs, and the environmental impacts of N2-fixer invasion appear to be as severe as those from anthropogenic N deposition in highly N polluted areas. Hence, inputs of N from N2 fixation can affect ecosystems as dramatically or even more strongly than N inputs from atmospheric deposition, and biomes in cold climates represent no exception with regard to the risk of being invaded by N2-fixing species. In particular, the cold biomes studied here show both a strong potential to be transformed by N2-fixing plants and a rapid subsequent saturation in the ecosystem’s capacity to retain N. Therefore, analogous to increases in N deposition, N2-fixing plant invasions must be deemed significant threats to biodiversity and to environmental quality.

  15. Reply: “Use of BIOME-BGC to simulate Mediterranean forest carbon stocks”

    OpenAIRE

    Maselli F; Salvati R; Barbati A; Chirici G; Chiesi M

    2011-01-01

    The current note responds to the critical contribution of Dr. Eastaugh on Chiesi et al. (Chiesi et al. 2011). That paper did not aim at applying BIOME-BGC to simulate stand growth, which requires a thorough modification of the model functions. In contrast, only a parameter setting was changed in order to adjust the predicted carbon storages during the simulation of quasi-equilibrium conditions. The adjustment was calibrated on volume statistics derived from the Tuscany forest inventory and is...

  16. Record of the Buff-fronted Owl (Aegolius harrisii in the Pampa Biome, southern Brazil

    Directory of Open Access Journals (Sweden)

    Marluci Müller Rebelato

    2011-02-01

    Full Text Available We present the second record of the Buff-fronted Owl (Aegolius harrisii in the Pampa Biome, South Brazil. On 17 January 2010 an adult male was found dead at the roadside along the BR-290, São Gabriel municipality, center-east of Rio Grande do Sul state. The specimen probably collided with a car when using the area for foraging. The record reported here agrees with the suggestion that A. harrisii can use disturbed and open areas.

  17. Software quality assurance and software safety in the Biomed Control System

    International Nuclear Information System (INIS)

    Singh, R.P.; Chu, W.T.; Ludewigt, B.A.; Marks, K.M.; Nyman, M.A.; Renner, T.R.; Stradtner, R.

    1989-01-01

    The Biomed Control System is a hardware/software system used for the delivery, measurement and monitoring of heavy-ion beams in the patient treatment and biology experiment rooms in the Bevalac at the Lawrence Berkeley Laboratory (LBL). This paper describes some aspects of this system including historical background philosophy, configuration management, hardware features that facilitate software testing, software testing procedures, the release of new software quality assurance, safety and operator monitoring. 3 refs

  18. Aura-biomes are present in the water layer above coral reef benthic macro-organisms

    Directory of Open Access Journals (Sweden)

    Kevin Walsh

    2017-08-01

    Full Text Available As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1 the coral Mussismilia braziliensis, (2 fleshy macroalgae (Stypopodium, Dictota and Canistrocarpus, (3 turf algae, and (4 the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific “aura-biome”. The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria, Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms.

  19. Genetic diversity of bats coronaviruses in the Atlantic Forest hotspot biome, Brazil.

    Science.gov (United States)

    Góes, Luiz Gustavo Bentim; Campos, Angélica Cristine de Almeida; Carvalho, Cristiano de; Ambar, Guilherme; Queiroz, Luzia Helena; Cruz-Neto, Ariovaldo Pereira; Munir, Muhammad; Durigon, Edison Luiz

    2016-10-01

    Bats are notorious reservoirs of genetically-diverse and high-profile pathogens, and are playing crucial roles in the emergence and re-emergence of viruses, both in human and in animals. In this report, we identified and characterized previously unknown and diverse genetic clusters of bat coronaviruses in the Atlantic Forest Biome, Brazil. These results highlight the virus richness of bats and their possible roles in the public health. Copyright © 2016 Elsevier B.V. All rights reserved.

  20. Federal Conservation Units in Brazil: The Situation of Biomes and Regions

    Directory of Open Access Journals (Sweden)

    Eduardo Pacca Luna Mattar

    2018-03-01

    Full Text Available ABSTRACT Federal conservation units (FCU are areas legally established by the government, in order to meet the needs of protection and sustainable exploitation of biodiversity. A way to ensure the efficiency of public management is to systematize data. Therefore, the present study grouped and analyzed public data about FCU. Brazil has 309 federal conservation units, which represent 9.06% of the national territory and 45305 residents households. The Northern Region covers 84.80% of these families and 79.20% of its area belongs to FCU. The Amazônia biome has 14.57% of its territory occupied by FCU; on the other hand, Pantanal has only 0.98% of its area protected. There is a higher concentration of public agents in the FCU of the Southeastern region and in the Mata Atlântica biome. The analysis of this information reveals significant differences between the biomes and the federation units, a fact that reflects the importance of the organization of public data.

  1. Convergence in the temperature response of leaf respiration across biomes and plant functional types.

    Science.gov (United States)

    Heskel, Mary A; O'Sullivan, Odhran S; Reich, Peter B; Tjoelker, Mark G; Weerasinghe, Lasantha K; Penillard, Aurore; Egerton, John J G; Creek, Danielle; Bloomfield, Keith J; Xiang, Jen; Sinca, Felipe; Stangl, Zsofia R; Martinez-de la Torre, Alberto; Griffin, Kevin L; Huntingford, Chris; Hurry, Vaughan; Meir, Patrick; Turnbull, Matthew H; Atkin, Owen K

    2016-04-05

    Plant respiration constitutes a massive carbon flux to the atmosphere, and a major control on the evolution of the global carbon cycle. It therefore has the potential to modulate levels of climate change due to the human burning of fossil fuels. Neither current physiological nor terrestrial biosphere models adequately describe its short-term temperature response, and even minor differences in the shape of the response curve can significantly impact estimates of ecosystem carbon release and/or storage. Given this, it is critical to establish whether there are predictable patterns in the shape of the respiration-temperature response curve, and thus in the intrinsic temperature sensitivity of respiration across the globe. Analyzing measurements in a comprehensive database for 231 species spanning 7 biomes, we demonstrate that temperature-dependent increases in leaf respiration do not follow a commonly used exponential function. Instead, we find a decelerating function as leaves warm, reflecting a declining sensitivity to higher temperatures that is remarkably uniform across all biomes and plant functional types. Such convergence in the temperature sensitivity of leaf respiration suggests that there are universally applicable controls on the temperature response of plant energy metabolism, such that a single new function can predict the temperature dependence of leaf respiration for global vegetation. This simple function enables straightforward description of plant respiration in the land-surface components of coupled earth system models. Our cross-biome analyses shows significant implications for such fluxes in cold climates, generally projecting lower values compared with previous estimates.

  2. Intrinsic climate dependency of ecosystem light and water-use-efficiencies across Australian biomes

    International Nuclear Information System (INIS)

    Shi, Hao; Li, Longhui; Eamus, Derek; Cleverly, James; Huete, Alfredo; Yu, Qiang; Beringer, Jason; Van Gorsel, Eva; Hutley, Lindsay

    2014-01-01

    The sensitivity of ecosystem gross primary production (GPP) to availability of water and photosynthetically active radiation (PAR) differs among biomes. Here we investigated variations of ecosystem light-use-efficiency (eLUE: GPP/PAR) and water-use-efficiency (eWUE: GPP/evapotranspiration) among seven Australian eddy covariance sites with differing annual precipitation, species composition and temperature. Changes to both eLUE and eWUE were primarily correlated with atmospheric vapor pressure deficit (VPD) at multiple temporal scales across biomes, with minor additional correlations observed with soil moisture and temperature. The effects of leaf area index on eLUE and eWUE were also relatively weak compared to VPD, indicating an intrinsic dependency of eLUE and eWUE on climate. Additionally, eLUE and eWUE were statistically different for biomes between summer and winter, except eWUE for savannas and the grassland. These findings will improve our understanding of how light- and water-use traits in Australian ecosystems may respond to climate change. (letter)

  3. Seasonal patterns of horse fly richness and abundance in the Pampa biome of southern Brazil.

    Science.gov (United States)

    Krüger, Rodrigo Ferreira; Krolow, Tiago Kütter

    2015-12-01

    Fluctuations in seasonal patterns of horse fly populations were examined in rainforests of tropical South America, where the climate is seasonal. These patterns were evaluated with robust analytical models rather than identifying the main factors that influenced the fluctuations. We examined the seasonality of populations of horse flies in fields and lowland areas of the Pampa biome of southern Brazil with generalized linear models. We also investigated the diversity of these flies and the sampling effort of Malaise traps in this biome over two years. All of the 29 species had clear seasonality with regard to occurrence and abundance, but only seven species were identified as being influenced by temperature and humidity. The sampling was sufficient and the estimated diversity was 10% more than observed. Seasonal trends were synchronized across species and the populations were most abundant between September and March and nearly zero in other months. While previous studies demonstrated that seasonal patterns in population fluctuations are correlated with climatic conditions in horse fly assemblages in South America rainforests, we show a clear effect of each factor on richness and abundance and the seasonality in the prevalence of horse fly assemblages in localities of the Pampa biome. © 2015 The Society for Vector Ecology.

  4. The future distribution of the savannah biome: model-based and biogeographic contingency.

    Science.gov (United States)

    Moncrieff, Glenn R; Scheiter, Simon; Langan, Liam; Trabucco, Antonio; Higgins, Steven I

    2016-09-19

    The extent of the savannah biome is expected to be profoundly altered by climatic change and increasing atmospheric CO2 concentrations. Contrasting projections are given when using different modelling approaches to estimate future distributions. Furthermore, biogeographic variation within savannahs in plant function and structure is expected to lead to divergent responses to global change. Hence the use of a single model with a single savannah tree type will likely lead to biased projections. Here we compare and contrast projections of South American, African and Australian savannah distributions from the physiologically based Thornley transport resistance statistical distribution model (TTR-SDM)-and three versions of a dynamic vegetation model (DVM) designed and parametrized separately for specific continents. We show that attempting to extrapolate any continent-specific model globally biases projections. By 2070, all DVMs generally project a decrease in the extent of savannahs at their boundary with forests, whereas the TTR-SDM projects a decrease in savannahs at their boundary with aridlands and grasslands. This difference is driven by forest and woodland expansion in response to rising atmospheric CO2 concentrations in DVMs, unaccounted for by the TTR-SDM. We suggest that the most suitable models of the savannah biome for future development are individual-based dynamic vegetation models designed for specific biogeographic regions.This article is part of the themed issue 'Tropical grassy biomes: linking ecology, human use and conservation'. © 2016 The Author(s).

  5. Reimplementation of the Biome-BGC model to simulate successional change.

    Science.gov (United States)

    Bond-Lamberty, Ben; Gower, Stith T; Ahl, Douglas E; Thornton, Peter E

    2005-04-01

    Biogeochemical process models are increasingly employed to simulate current and future forest dynamics, but most simulate only a single canopy type. This limitation means that mixed stands, canopy succession and understory dynamics cannot be modeled, severe handicaps in many forests. The goals of this study were to develop a version of Biome-BGC that supported multiple, interacting vegetation types, and to assess its performance and limitations by comparing modeled results to published data from a 150-year boreal black spruce (Picea mariana (Mill.) BSP) chronosequence in northern Manitoba, Canada. Model data structures and logic were modified to support an arbitrary number of interacting vegetation types; an explicit height calculation was necessary to prioritize radiation and precipitation interception. Two vegetation types, evergreen needle-leaf and deciduous broadleaf, were modeled based on site-specific meteorological and physiological data. The new version of Biome-BGC reliably simulated observed changes in leaf area, net primary production and carbon stocks, and should be useful for modeling the dynamics of mixed-species stands and ecological succession. We discuss the strengths and limitations of Biome-BGC for this application, and note areas in which further work is necessary for reliable simulation of boreal biogeochemical cycling at a landscape scale.

  6. Modelling the impacts of reoccurring fires in tropical savannahs using Biome-BGC.

    Science.gov (United States)

    Fletcher, Charlotte; Petritsch, Richard; Pietsch, Stephan

    2010-05-01

    Fires are a dominant feature of tropical savannahs and have occurred throughout history by natural as well as human-induced means. These fires have a profound influence on the landscape in terms of flux dynamics and vegetative species composition. This study attempts to understand the impacts of fire regimes on flux dynamics and vegetation composition in savannahs using the Biome-BGC model. The Batéké Plateau, Gabon - an area of savannah grasslands in the Congo basin, serves as a case-study. To achieve model validation for savannahs, data sets from stands with differing levels of past burning are used. It is hypothesised that the field measurements from those stands with lower-levels of past burning will correlate with the Biome-BGC model output, meaning that the model is validated for the savannah excluding fire regimes. However, in reality, fire is frequent in the savannah. Data on past fire events are available from the Moderate Resolution Imaging Spectroradiometer (MODIS) to provide the fire regimes of the model. As the field data-driven measurements of the burnt stands are influenced by fire in the savannah, this will therefore result in a Biome-BGC model validated for the impacts of fire on savannah ecology. The validated model can then be used to predict the savannah's flux dynamics under the fire scenarios expected with climate and/or human impact change.

  7. Development of the BIOME-BGC model for the simulation of managed Moso bamboo forest ecosystems.

    Science.gov (United States)

    Mao, Fangjie; Li, Pingheng; Zhou, Guomo; Du, Huaqiang; Xu, Xiaojun; Shi, Yongjun; Mo, Lufeng; Zhou, Yufeng; Tu, Guoqing

    2016-05-01

    Numerical models are the most appropriate instrument for the analysis of the carbon balance of terrestrial ecosystems and their interactions with changing environmental conditions. The process-based model BIOME-BGC is widely used in simulation of carbon balance within vegetation, litter and soil of unmanaged ecosystems. For Moso bamboo forests, however, simulations with BIOME-BGC are inaccurate in terms of the growing season and the carbon allocation, due to the oversimplified representation of phenology. Our aim was to improve the applicability of BIOME-BGC for managed Moso bamboo forest ecosystem by implementing several new modules, including phenology, carbon allocation, and management. Instead of the simple phenology and carbon allocation representations in the original version, a periodic Moso bamboo phenology and carbon allocation module was implemented, which can handle the processes of Moso bamboo shooting and high growth during "on-year" and "off-year". Four management modules (digging bamboo shoots, selective cutting, obtruncation, fertilization) were integrated in order to quantify the functioning of managed ecosystems. The improved model was calibrated and validated using eddy covariance measurement data collected at a managed Moso bamboo forest site (Anji) during 2011-2013 years. As a result of these developments and calibrations, the performance of the model was substantially improved. Regarding the measured and modeled fluxes (gross primary production, total ecosystem respiration, net ecosystem exchange), relative errors were decreased by 42.23%, 103.02% and 18.67%, respectively. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. Beyond the climate envelope: using trait filtering models to predict biome boundaries from plant physiology.

    Science.gov (United States)

    Fisher, R.; Hoffmann, W. A.; Muszala, S.

    2014-12-01

    The introduction of second-generation dynamic vegetation models - which simulate the distribution of light resources between plant types along the vertical canopy profile, and therefore facilitate the representation of plant competition explicitly - is a large increase in the complexity and fidelity with which the terrestrial biosphere is abstracted into Earth System Models. In this new class of model, biome boundaries are predicted as the emergent properties of plant physiology, and are therefore sensitive to the high-dimensional parameterizations of plant functional traits. These new approaches offer the facility to quantitatively test ecophysiological hypotheses of plant distribution at large scales, a field which remains surprisingly under-developed. Here we describe experiments conducted with the Community Land Model Ecosystem Demography component, CLM(ED), in which we reduce the complexity of the problem by testing how individual plant functional trait changes to control the location of biome boundaries between functional types. Specifically, we investigate which physiological trade-offs determine the boundary between frequently burned savanna and forest biomes, and attempt to distinguish how each strategic life-history trade-off (carbon storage, bark investment, re-sprouting strategy) contributes towards the maintenance of sharp geographical gradients between fire adapted and typically inflammable closed canopy ecosystems. This study forms part of the planning for a model-inspired fire manipulation experiment at the cerrado-forest boundary in South-Eastern Brazil, and the results will be used to guide future data-collection and analysis strategies.

  9. ANTIBACTERIAL POTENTIAL OF NATIVE PLANTS FROM THE CAATINGA BIOME AGAINST Staphylococcus spp. ISOLATES FROM SMALL RUMINANTS WITH MASTITIS

    OpenAIRE

    PEIXOTO, RODOLFO DE MORAES; SILVA, WELLINGTON ERASMO LIMA E; ALMEIDA, JACKSON ROBERTO GUEDES SILVA; BRANCO, ALEXSANDRO; COSTA, MATEUS MATIUZZI DA

    2016-01-01

    ABSTRACT The aim of the present study is to assess the antibacterial potential of plants from the Caatinga biome of the semi-arid region of Pernambuco, against Staphylococcus spp. isolates from cases of subclinical mastitis in small ruminants, such as goats and ewes. Ethanolic extracts of the following plants from the Caatinga biome were used: Encholirium spectabile Mart., Bromelia laciniosa Mart., Neoglaziovia variegata Mez., Amburana cearensis (Fr. Allem.) A. C. Smith, Hymenaea martiana Hay...

  10. Modelling the carbon budget of intensive forest monitoring sites in Germany using the simulation model BIOME-BGC

    OpenAIRE

    Jochheim, H.; Puhlmann, M.; Beese, F.; Berthold, D.; Einert, P.; Kallweit, R.; Konopatzky, A.; Meesenburg, H.; Meiwes, K.-J.; Raspe, S.; Schulte-Bisping, H.; Schulz, C.

    2008-01-01

    It is shown that by calibrating the simulation model BIOME-BGC with mandatory and optional Level II data, within the ICP Forest programme, a well-founded calculation of the carbon budget of forest stands is achievable and, based on succeeded calibration, the modified BIOME-BGC model is a useful tool to assess the effect of climate change on forest ecosystems. peerReviewed

  11. Evolutionary history of a keystone pollinator parallels the biome occupancy of angiosperms in the Greater Cape Floristic Region.

    Science.gov (United States)

    de Jager, Marinus L; Ellis, Allan G

    2017-02-01

    The Greater Cape Floristic Region (GCFR) in South Africa has been extensively investigated for its phenomenal angiosperm diversity. A key emergent pattern is the occurrence of older plant lineages in the southern Fynbos biome and younger lineages in the northern Succulent Karoo biome. We know practically nothing, however, about the evolutionary history of the animals that pollinate this often highly-specialized flora. In this study, we explore the evolutionary history of an important GCFR fly pollinator, Megapalpus capensis, and ask whether it exhibits broadly congruent genetic structuring and timing of diversification to flowering plants within these biomes. We find that the oldest M. capensis lineages originated in Fynbos during the Miocene, while younger Succulent Karoo lineages diverged in the Pliocene and correspond to the proposed age of this recent biome. A strong signature of population expansion is also recovered for flies in this arid biome, consistent with recent colonization. Our first investigation into the evolutionary history of GCFR pollinators thus supports a recent origin of the SK biome, as inferred from angiosperm phylogenies, and suggests that plants and pollinators may have co-diverged within this remarkable area. Copyright © 2016 Elsevier Inc. All rights reserved.

  12. Transparent Guideline Methodology Needed

    DEFF Research Database (Denmark)

    Lidal, Ingeborg; Norén, Camilla; Mäkelä, Marjukka

    2013-01-01

    As part of learning at the Nordic Workshop of Evidence-based Medicine, we have read with interest the practice guidelines for central venous access, published in your Journal in 2012.1 We appraised the quality of this guideline using the checklist developed by The Evidence-Based Medicine Working ...... are based on best currently available evidence. Our concerns are in two main categories: the rigor of development, including methodology of searching, evaluating, and combining the evidence; and editorial independence, including funding and possible conflicts of interest....... Group.2 Similar criteria for guideline quality have been suggested elsewhere.3 Our conclusion was that this much needed guideline is currently unclear about several aspects of the methodology used in developing the recommendations. This means potential users cannot be certain that the recommendations...

  13. MIRD methodology

    International Nuclear Information System (INIS)

    Rojo, Ana M.; Gomez Parada, Ines

    2004-01-01

    The MIRD (Medical Internal Radiation Dose) system was established by the Society of Nuclear Medicine of USA in 1960 to assist the medical community in the estimation of the dose in organs and tissues due to the incorporation of radioactive materials. Since then, 'MIRD Dose Estimate Report' (from the 1 to 12) and 'Pamphlets', of great utility for the dose calculations, were published. The MIRD system was planned essentially for the calculation of doses received by the patients during nuclear medicine diagnostic procedures. The MIRD methodology for the absorbed doses calculations in different tissues is explained

  14. PSA methodology

    Energy Technology Data Exchange (ETDEWEB)

    Magne, L

    1997-12-31

    The purpose of this text is first to ask a certain number of questions on the methods related to PSAs. Notably we will explore the positioning of the French methodological approach - as applied in the EPS 1300{sup 1} and EPS 900{sup 2} PSAs - compared to other approaches (Part One). This reflection leads to more general reflection: what contents, for what PSA? This is why, in Part Two, we will try to offer a framework for definition of the criteria a PSA should satisfy to meet the clearly identified needs. Finally, Part Three will quickly summarize the questions approached in the first two parts, as an introduction to the debate. 15 refs.

  15. PSA methodology

    International Nuclear Information System (INIS)

    Magne, L.

    1996-01-01

    The purpose of this text is first to ask a certain number of questions on the methods related to PSAs. Notably we will explore the positioning of the French methodological approach - as applied in the EPS 1300 1 and EPS 900 2 PSAs - compared to other approaches (Part One). This reflection leads to more general reflection: what contents, for what PSA? This is why, in Part Two, we will try to offer a framework for definition of the criteria a PSA should satisfy to meet the clearly identified needs. Finally, Part Three will quickly summarize the questions approached in the first two parts, as an introduction to the debate. 15 refs

  16. Testing methodologies

    Energy Technology Data Exchange (ETDEWEB)

    Bender, M.A.

    1990-01-01

    Several methodologies are available for screening human populations for exposure to ionizing radiation. Of these, aberration frequency determined in peripheral blood lymphocytes is the best developed. Individual exposures to large doses can easily be quantitated, and population exposures to occupational levels can be detected. However, determination of exposures to the very low doses anticipated from a low-level radioactive waste disposal site is more problematical. Aberrations occur spontaneously, without known cause. Exposure to radiation induces no new or novel types, but only increases their frequency. The limitations of chromosomal aberration dosimetry for detecting low level radiation exposures lie mainly in the statistical signal to noise'' problem, the distribution of aberrations among cells and among individuals, and the possible induction of aberrations by other environmental occupational or medical exposures. However, certain features of the human peripheral lymphocyte-chromosomal aberration system make it useful in screening for certain types of exposures. Future technical developments may make chromosomal aberration dosimetry more useful for low-level radiation exposures. Other methods, measuring gene mutations or even minute changes on the DNA level, while presently less will developed techniques, may eventually become even more practical and sensitive assays for human radiation exposure. 15 refs.

  17. Testing methodologies

    International Nuclear Information System (INIS)

    Bender, M.A.

    1990-01-01

    Several methodologies are available for screening human populations for exposure to ionizing radiation. Of these, aberration frequency determined in peripheral blood lymphocytes is the best developed. Individual exposures to large doses can easily be quantitated, and population exposures to occupational levels can be detected. However, determination of exposures to the very low doses anticipated from a low-level radioactive waste disposal site is more problematical. Aberrations occur spontaneously, without known cause. Exposure to radiation induces no new or novel types, but only increases their frequency. The limitations of chromosomal aberration dosimetry for detecting low level radiation exposures lie mainly in the statistical ''signal to noise'' problem, the distribution of aberrations among cells and among individuals, and the possible induction of aberrations by other environmental occupational or medical exposures. However, certain features of the human peripheral lymphocyte-chromosomal aberration system make it useful in screening for certain types of exposures. Future technical developments may make chromosomal aberration dosimetry more useful for low-level radiation exposures. Other methods, measuring gene mutations or even minute changes on the DNA level, while presently less will developed techniques, may eventually become even more practical and sensitive assays for human radiation exposure. 15 refs

  18. Morphofunctional diversity of equine of varied genetic compositions raised in the Pantanal biome of Brazil.

    Science.gov (United States)

    de Rezende, Marcos Paulo Gonçalves; de Souza, Julio Cesar; Carneiro, Paulo Luiz Souza; Bozzi, Riccardo; Jardim, Rodrigo Jose Delgado; Malhado, Carlos Henrique Mendes

    2018-06-01

    Evaluating phenotypic diversity makes it possible to identify discrepancies in aptitudes among animals of different genetic bases, which is an indicator of adaptive or selective differences between populations. The objective of this work was to evaluate the morphofunctional diversity of 452 male and female adult equines (Arabian, Quarter Mile, Pantaneiro, and Criollo breeds, and undefined crossbreeds of horses and mules) raised in the Pantanal biome (Brazil). Linear measurements were performed to estimate conformation indexes. Initially, a discriminant analysis was performed, regardless of the animal's size, followed by factor analysis. The factors were characterized and used as new variables. The diversity among equines and their relationship with the factors were evaluated using multivariate analysis. The factors were classified according to their decreasing importance: balance, rusticity, and robustness for the measurement factors; and load, ability, conformation, and equilibrium for the index factors. The genetic groups of equines have well-defined morphofunctional characteristics. The main differences are based on the rusticity and ability typologies in relation to those based on performance. Equines introduced to the Pantanal biome presented a more robust and compact body with good conformation. As a result, these horses may have superior athletic performance during equestrian activities when compared to the Pantaneiro local breed. However, this biotype may represent less rusticity (less adaptive capacity). Therefore, the regional breed can be equal or better in equestrian activities than breeds introduced to the Pantanal biome. Thus, breeders may cross horses from local breeds as an alternative to those introduced. Undefined crossbred male equines presented a different profile from the Pantaneiro breed, which may indicate little use of crossbreeds in breeding.

  19. Identification of priority conservation areas and potential corridors for jaguars in the Caatinga biome, Brazil.

    Science.gov (United States)

    Morato, Ronaldo Gonçalves; Ferraz, Katia Maria Paschoaletto Micchi de Barros; de Paula, Rogério Cunha; de Campos, Cláudia Bueno

    2014-01-01

    The jaguar, Panthera onca, is a top predator with the extant population found within the Brazilian Caatinga biome now known to be on the brink of extinction. Designing new conservation units and potential corridors are therefore crucial for the long-term survival of the species within the Caatinga biome. Thus, our aims were: 1) to recognize suitable areas for jaguar occurrence, 2) to delineate areas for jaguar conservation (PJCUs), 3) to design corridors among priority areas, and 4) to prioritize PJCUs. A total of 62 points records of jaguar occurrence and 10 potential predictors were analyzed in a GIS environment. A predictive distributional map was obtained using Species Distribution Modeling (SDM) as performed by the Maximum Entropy (Maxent) algorithm. Areas equal to or higher than the median suitability value of 0.595 were selected as of high suitability for jaguar occurrence and named as Priority Jaguar Conservation Units (PJCU). Ten PJCUs with sizes varying from 23.6 km2 to 4,311.0 km2 were identified. Afterwards, we combined the response curve, as generated by SDM, and expert opinions to create a permeability matrix and to identify least cost corridors and buffer zones between each PJCU pair. Connectivity corridors and buffer zone for jaguar movement included an area of 8.884,26 km2 and the total corridor length is about 160.94 km. Prioritizing criteria indicated the PJCU representing c.a. 68.61% of the total PJCU area (PJCU # 1) as of high priority for conservation and connectivity with others PJCUs (PJCUs # 4, 5 and 7) desirable for the long term survival of the species. In conclusion, by using the jaguar as a focal species and combining SDM and expert opinion we were able to create a valid framework for practical conservation actions at the Caatinga biome. The same approach could be used for the conservation of other carnivores.

  20. Identification of priority conservation areas and potential corridors for jaguars in the Caatinga biome, Brazil.

    Directory of Open Access Journals (Sweden)

    Ronaldo Gonçalves Morato

    Full Text Available The jaguar, Panthera onca, is a top predator with the extant population found within the Brazilian Caatinga biome now known to be on the brink of extinction. Designing new conservation units and potential corridors are therefore crucial for the long-term survival of the species within the Caatinga biome. Thus, our aims were: 1 to recognize suitable areas for jaguar occurrence, 2 to delineate areas for jaguar conservation (PJCUs, 3 to design corridors among priority areas, and 4 to prioritize PJCUs. A total of 62 points records of jaguar occurrence and 10 potential predictors were analyzed in a GIS environment. A predictive distributional map was obtained using Species Distribution Modeling (SDM as performed by the Maximum Entropy (Maxent algorithm. Areas equal to or higher than the median suitability value of 0.595 were selected as of high suitability for jaguar occurrence and named as Priority Jaguar Conservation Units (PJCU. Ten PJCUs with sizes varying from 23.6 km2 to 4,311.0 km2 were identified. Afterwards, we combined the response curve, as generated by SDM, and expert opinions to create a permeability matrix and to identify least cost corridors and buffer zones between each PJCU pair. Connectivity corridors and buffer zone for jaguar movement included an area of 8.884,26 km2 and the total corridor length is about 160.94 km. Prioritizing criteria indicated the PJCU representing c.a. 68.61% of the total PJCU area (PJCU # 1 as of high priority for conservation and connectivity with others PJCUs (PJCUs # 4, 5 and 7 desirable for the long term survival of the species. In conclusion, by using the jaguar as a focal species and combining SDM and expert opinion we were able to create a valid framework for practical conservation actions at the Caatinga biome. The same approach could be used for the conservation of other carnivores.

  1. Reactivity continuum modeling of leaf, root, and wood decomposition across biomes

    Science.gov (United States)

    Koehler, Birgit; Tranvik, Lars J.

    2015-07-01

    Large carbon dioxide amounts are released to the atmosphere during organic matter decomposition. Yet the large-scale and long-term regulation of this critical process in global carbon cycling by litter chemistry and climate remains poorly understood. We used reactivity continuum (RC) modeling to analyze the decadal data set of the "Long-term Intersite Decomposition Experiment," in which fine litter and wood decomposition was studied in eight biome types (224 time series). In 32 and 46% of all sites the litter content of the acid-unhydrolyzable residue (AUR, formerly referred to as lignin) and the AUR/nitrogen ratio, respectively, retarded initial decomposition rates. This initial rate-retarding effect generally disappeared within the first year of decomposition, and rate-stimulating effects of nutrients and a rate-retarding effect of the carbon/nitrogen ratio became more prevalent. For needles and leaves/grasses, the influence of climate on decomposition decreased over time. For fine roots, the climatic influence was initially smaller but increased toward later-stage decomposition. The climate decomposition index was the strongest climatic predictor of decomposition. The similar variability in initial decomposition rates across litter categories as across biome types suggested that future changes in decomposition may be dominated by warming-induced changes in plant community composition. In general, the RC model parameters successfully predicted independent decomposition data for the different litter-biome combinations (196 time series). We argue that parameterization of large-scale decomposition models with RC model parameters, as opposed to the currently common discrete multiexponential models, could significantly improve their mechanistic foundation and predictive accuracy across climate zones and litter categories.

  2. Clonality analysis of lymphoid proliferations using the BIOMED-2 clonality assays: a single institution experience

    Science.gov (United States)

    Kokovic, Ira; Novakovic, Barbara Jezersek; Cerkovnik, Petra; Novakovic, Srdjan

    2014-01-01

    Background Clonality determination in patients with lymphoproliferative disorders can improve the final diagnosis. The aim of our study was to evaluate the applicative value of standardized BIOMED-2 gene clonality assay protocols for the analysis of clonality of lymphocytes in a group of different lymphoid proliferations. Materials and methods. With this purpose, 121 specimens from 91 patients with suspected lymphoproliferations submitted for routine diagnostics from January to December 2011 were retrospectively analyzed. According to the final diagnosis, our series comprised 32 cases of B-cell lymphomas, 38 cases of non-Hodgkin’s T-cell lymphomas and 51 cases of reactive lymphoid proliferations. Clonality testing was performed using the BIOMED-2 clonality assays. Results The determined sensitivity of the TCR assay was 91.9%, while the sensitivity of the IGH assay was 74.2%. The determined specificity of the IGH assay was 73.3% in the group of lymphomas and 87.2% in the group of reactive lesions. The determined specificity of the TCR assay was 62.5% in the group of lymphomas and 54.3% in the group of reactive lesions. Conclusions In the present study, we confirmed the utility of standardized BIOMED-2 clonality assays for the detection of clonality in a routine diagnostical setting of non-Hodgkin’s lymphomas. Reactions for the detection of the complete IGH rearrangements and reactions for the detection of the TCR rearrangements are a good choice for clonality testing of a wide range of lymphoid proliferations and specimen types while the reactions for the detection of incomplete IGH rearrangements have not shown any additional diagnostic value. PMID:24991205

  3. Global soil-climate-biome diagram: linking soil properties to climate and biota

    Science.gov (United States)

    Zhao, X.; Yang, Y.; Fang, J.

    2017-12-01

    As a critical component of the Earth system, soils interact strongly with both climate and biota and provide fundamental ecosystem services that maintain food, climate, and human security. Despite significant progress in digital soil mapping techniques and the rapidly growing quantity of observed soil information, quantitative linkages between soil properties, climate and biota at the global scale remain unclear. By compiling a large global soil database, we mapped seven major soil properties (bulk density [BD]; sand, silt and clay fractions; soil pH; soil organic carbon [SOC] density [SOCD]; and soil total nitrogen [STN] density [STND]) based on machine learning algorithms (regional random forest [RF] model) and quantitatively assessed the linkage between soil properties, climate and biota at the global scale. Our results demonstrated a global soil-climate-biome diagram, which improves our understanding of the strong correspondence between soils, climate and biomes. Soil pH decreased with greater mean annual precipitation (MAP) and lower mean annual temperature (MAT), and the critical MAP for the transition from alkaline to acidic soil pH decreased with decreasing MAT. Specifically, the critical MAP ranged from 400-500 mm when the MAT exceeded 10 °C but could decrease to 50-100 mm when the MAT was approximately 0 °C. SOCD and STND were tightly linked; both increased in accordance with lower MAT and higher MAP across terrestrial biomes. Global stocks of SOC and STN were estimated to be 788 ± 39.4 Pg (1015 g, or billion tons) and 63 ± 3.3 Pg in the upper 30-cm soil layer, respectively, but these values increased to 1654 ± 94.5 Pg and 133 ± 7.8 Pg in the upper 100-cm soil layer, respectively. These results reveal quantitative linkages between soil properties, climate and biota at the global scale, suggesting co-evolution of the soil, climate and biota under conditions of global environmental change.

  4. Biomímesis: una propuesta ética y técnica para reorientar la ingeniería por los senderos de la sustentabilidad

    Directory of Open Access Journals (Sweden)

    Nicolás Jiménez Iguarán

    2016-01-01

    Full Text Available Nos encontramos en lo que el intelectual español Jorge Riechmann denomina “el siglo de la gran prueba”. La actual crisis ambiental, cuyos síntomas no dejan de aparecer, nos impone retos en todos los niveles de nuestra vida. El presente trabajo tiene el propósito de explorar las potencialidades que tiene la ingeniería para superar esta crisis (o “prueba”, a la luz de la categoría biomímesis. Para esto, partimos de una reflexión central sobre la correspondencia entre el saber técnico ingenieril, los límites de la naturaleza y la noción de progreso para, a partir de ella, realizar una crítica propositiva a la ingeniería e inferir algunos elementos éticos que encaminen su desarrollo. Como ciencia aplicada, la ingeniería forma parte de nuestras vidas así no seamos plenamente conscientes de ello. En su desarrollo y evolución ha contribuido a producir sobrecargas significativas en la biósfera. La ética ambiental ha venido insistiendo, durante más de cinco décadas, en la necesidad de reconducir nuestra civilización hacia técnicas aplicadas que aprendan de la naturaleza en lugar de degradarla. La biomímesis, al recordar que los resultados de la ingeniería deben estar asociados a un objetivo social colectivo, se presenta como un camino para superar esta compleja realidad.

  5. Sensitivity Analysis of Biome-Bgc Model for Dry Tropical Forests of Vindhyan Highlands, India

    Science.gov (United States)

    Kumar, M.; Raghubanshi, A. S.

    2011-08-01

    A process-based model BIOME-BGC was run for sensitivity analysis to see the effect of ecophysiological parameters on net primary production (NPP) of dry tropical forest of India. The sensitivity test reveals that the forest NPP was highly sensitive to the following ecophysiological parameters: Canopy light extinction coefficient (k), Canopy average specific leaf area (SLA), New stem C : New leaf C (SC:LC), Maximum stomatal conductance (gs,max), C:N of fine roots (C:Nfr), All-sided to projected leaf area ratio and Canopy water interception coefficient (Wint). Therefore, these parameters need more precision and attention during estimation and observation in the field studies.

  6. SENSITIVITY ANALYSIS OF BIOME-BGC MODEL FOR DRY TROPICAL FORESTS OF VINDHYAN HIGHLANDS, INDIA

    OpenAIRE

    M. Kumar; A. S. Raghubanshi

    2012-01-01

    A process-based model BIOME-BGC was run for sensitivity analysis to see the effect of ecophysiological parameters on net primary production (NPP) of dry tropical forest of India. The sensitivity test reveals that the forest NPP was highly sensitive to the following ecophysiological parameters: Canopy light extinction coefficient (k), Canopy average specific leaf area (SLA), New stem C : New leaf C (SC:LC), Maximum stomatal conductance (gs,max), C:N of fine roots (C:Nfr), All-sided to...

  7. Characterizing forest carbon stocks at tropical biome and landscape level in Mount Apo National Park, Philippines

    Science.gov (United States)

    Rubas, L. C.

    2012-12-01

    Forest resources sequester and store carbon, and serve as a natural brake on climate change. In the tropics, the largest source of greenhouse emission is from deforestation and forest degradation (Gibbs et al 2007). This paper attempts to compile sixty (60) existing studies on using remote sensing to measure key environmental forest indicators at two levels of scales: biome and landscape level. At the tropical forest biome level, there is not as much remote sensing studies that have been done as compared to other forest biomes. Also, existing studies on tropical Asia is still sparse compared to other tropical regions in Latin America and Africa. Biomass map is also produced for the tropical biome using keyhole macro language (KML) which is projected on Google Earth. The compiled studies showed there are four indicators being measured using remote sensors in tropical forest. These are biomass, landcover classification, deforestation and cloud cover. The landscape level will focus on Mount Apo National Park in the Philippines which is encompassing a total area of 54,974.87 hectares. It is one of the ten priority sites targeted in the World Bank-assisted Biodiversity Conservation Program. This park serves as the major watershed for the three provinces with 19 major rivers emanating from the montane formations. Only a small fraction of the natural forest that once covered the country remains. In spite of different policies that aim to reduce logging recent commercial deforestation, illegal logging and agricultural expansion pose an important threat to the remaining forest areas. In some locations in the country, these hotspots of deforestation overlap with the protected areas (Verburg et al 2006). The study site was clipped using ArcGIS from the forest biomass carbon density map produced by Gibbs and Brown (2007). Characterization on this national park using vegetation density, elevation, slope, land cover and precipitation will be conducted to determine factors that

  8. Extensiones biométricas para bases de datos objeto- relacionales

    OpenAIRE

    Miranda, Ernesto; Ruíz, Silvia; Aguirre, Juan José; Herlein, Mauro; Etchart, Graciela; Alvez, Carlos E.

    2017-01-01

    La autenticación de personas basadas en rasgos biométricos se ha vuelto muy popular en los últimos años como consecuencia de la baja en los costos de los sensores requeridos, su inclusión en dispositivos de consumo masivo y el surgimiento de vulnerabilidades debido al uso de múltiples claves de acceso a diferentes sitios que requieren cierto nivel de seguridad como ser cuentas de correo, sitios de banca electrónica, sistemas corporativos, etc. De todos los rasgos utilizados en biometría, el i...

  9. Impacts of land-use and land-cover change on stream hydrochemistry in the Cerrado and Amazon biomes.

    Science.gov (United States)

    Nóbrega, Rodolfo L B; Guzha, Alphonce C; Lamparter, Gabriele; Amorim, Ricardo S S; Couto, Eduardo G; Hughes, Harold J; Jungkunst, Hermann F; Gerold, Gerhard

    2018-04-14

    Studies on the impacts of land-use and land-cover change on stream hydrochemistry in active deforestation zones of the Amazon agricultural frontier are limited and have often used low-temporal-resolution datasets. Moreover, these impacts are not concurrently assessed in well-established agricultural areas and new deforestations hotspots. We aimed to identify these impacts using an experimental setup to collect high-temporal-resolution hydrological and hydrochemical data in two pairs of low-order streams in catchments under contrasting land use and land cover (native vegetation vs. pasture) in the Amazon and Cerrado biomes. Our results indicate that the conversion of natural landscapes to pastures increases carbon and nutrient fluxes via streamflow in both biomes. These changes were the greatest in total inorganic carbon in the Amazon and in potassium in the Cerrado, representing a 5.0- and 5.5-fold increase in the fluxes of each biome, respectively. We found that stormflow, which is often neglected in studies on stream hydrochemistry in the tropics, plays a substantial role in the carbon and nutrient fluxes, especially in the Amazon biome, as its contributions to hydrochemical fluxes are mostly greater than the volumetric contribution to the total streamflow. These findings demonstrate that assessments of the impacts of deforestation in the Amazon and Cerrado biomes should also take into account rapid hydrological pathways; however, this can only be achieved through collection of high-temporal-resolution data. Copyright © 2018 Elsevier B.V. All rights reserved.

  10. Large-scale impact of climate change vs. land-use change on future biome shifts in Latin America.

    Science.gov (United States)

    Boit, Alice; Sakschewski, Boris; Boysen, Lena; Cano-Crespo, Ana; Clement, Jan; Garcia-Alaniz, Nashieli; Kok, Kasper; Kolb, Melanie; Langerwisch, Fanny; Rammig, Anja; Sachse, René; van Eupen, Michiel; von Bloh, Werner; Clara Zemp, Delphine; Thonicke, Kirsten

    2016-11-01

    Climate change and land-use change are two major drivers of biome shifts causing habitat and biodiversity loss. What is missing is a continental-scale future projection of the estimated relative impacts of both drivers on biome shifts over the course of this century. Here, we provide such a projection for the biodiverse region of Latin America under four socio-economic development scenarios. We find that across all scenarios 5-6% of the total area will undergo biome shifts that can be attributed to climate change until 2099. The relative impact of climate change on biome shifts may overtake land-use change even under an optimistic climate scenario, if land-use expansion is halted by the mid-century. We suggest that constraining land-use change and preserving the remaining natural vegetation early during this century creates opportunities to mitigate climate-change impacts during the second half of this century. Our results may guide the evaluation of socio-economic scenarios in terms of their potential for biome conservation under global change. © 2016 John Wiley & Sons Ltd.

  11. Biome depletion in conjunction with evolutionary mismatches could play a role in the etiology of neurofibromatosis 1.

    Science.gov (United States)

    Beales, Donna L

    2015-04-01

    Neurofibromatosis 1 (NF1) arises de novo in a striking 30-50% of cases, pointing toward an environmental etiology, though none has been clearly identified. The Biome Depletion Theory posits that the absence of mutualistic and commensal organisms within the human body coupled with modern lifestyle alterations may have profoundly deleterious effects, inclusive of immunologic derangement that is thought to result in allergy, atopy, and numerous autoimmune diseases. Biome depletion has been implicated as a factor in the etiology of both multiple sclerosis and autism spectrum disorders; biome reconstitution, i.e. replenishment of the biome with certain keynote species, is being used in the treatment of these and other autoimmune states. Neurofibromatosis 1 has been associated with allergy, various autoimmune states, multiple sclerosis, and autism. Recent research has posited that NF1, multiple sclerosis and autism may all arise from disturbances in the neural crest during gestation. This paper hypothesizes that there is indirect evidence that a highly inflammatory uterine state may precipitate epigenetic changes in vulnerable NF-related genes in the course of fetal development. The etiology of NF1 may lie in the absence of immunomodulation by commensal and mutualistic species once ubiquitously present in the environment, as well as through adoption of a modern lifestyle that contributes to chronic inflammation. Replenishment of helminths and other missing organisms to the human biome prior to conception as well as addressing nutritional status, psychological stress, and environmental exposures may prevent the development of NF1. Copyright © 2015 Elsevier Ltd. All rights reserved.

  12. Terrestrial ecosystem process model Biome-BGCMuSo v4.0: summary of improvements and new modeling possibilities

    Science.gov (United States)

    Hidy, Dóra; Barcza, Zoltán; Marjanović, Hrvoje; Zorana Ostrogović Sever, Maša; Dobor, Laura; Gelybó, Györgyi; Fodor, Nándor; Pintér, Krisztina; Churkina, Galina; Running, Steven; Thornton, Peter; Bellocchi, Gianni; Haszpra, László; Horváth, Ferenc; Suyker, Andrew; Nagy, Zoltán

    2016-12-01

    The process-based biogeochemical model Biome-BGC was enhanced to improve its ability to simulate carbon, nitrogen, and water cycles of various terrestrial ecosystems under contrasting management activities. Biome-BGC version 4.1.1 was used as a base model. Improvements included addition of new modules such as the multilayer soil module, implementation of processes related to soil moisture and nitrogen balance, soil-moisture-related plant senescence, and phenological development. Vegetation management modules with annually varying options were also implemented to simulate management practices of grasslands (mowing, grazing), croplands (ploughing, fertilizer application, planting, harvesting), and forests (thinning). New carbon and nitrogen pools have been defined to simulate yield and soft stem development of herbaceous ecosystems. The model version containing all developments is referred to as Biome-BGCMuSo (Biome-BGC with multilayer soil module; in this paper, Biome-BGCMuSo v4.0 is documented). Case studies on a managed forest, cropland, and grassland are presented to demonstrate the effect of model developments on the simulation of plant growth as well as on carbon and water balance.

  13. A methodology for developing distributed programs

    NARCIS (Netherlands)

    Ramesh, S.; Mehndiratta, S.L.

    1987-01-01

    A methodology, different from the existing ones, for constructing distributed programs is presented. It is based on the well-known idea of developing distributed programs via synchronous and centralized programs. The distinguishing features of the methodology are: 1) specification include process

  14. Aspectos biométricos do desenvolvimento testicular e corporal em cutias (Dasyprocta aguti criadas em cativeiros

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    Antônio Chaves de Assis-Neto

    2003-01-01

    Full Text Available Analisou-se os dados biométricos do desenvolvimento testicular e peso corporal de 31 cutias (Dasyprocta aguti desde o nascimento até os 14 meses de idade. As correlações entre o peso corporal, idade e parâmetros testiculares apresentaram-se altamente significativas. O peso testicular, o volume testicular, assim como os demais parâmetros biométricos testiculares (comprimento, diâmetro e perímetro, evoluíram lenta e gradualmente até os 8 meses de idade. A partir dos 9 meses, o crescimento foi mais rápido. O desenvolvimento biométrico do testículo pode ser dividido em duas fases, de 0 - 8 meses e de 9 - 14 meses de idade, sendo 9 meses considerado ponto de corte em se tratando de desenvolvimento testicular de cutias criadas em cativeiro.

  15. The Use of Fire Radiative Power to Estimate the Biomass Consumption Coefficient for Temperate Grasslands in the Atlantic Forest Biome

    Directory of Open Access Journals (Sweden)

    Bibiana Salvador Cabral da Costa

    Full Text Available Abstract Every year, many active fire spots are identified in the satellite images of the southern Brazilian grasslands in the Atlantic Forest biome and Pampa biome. Fire Radiative Power (FRP is a technique that uses remotely sensed data to quantify burned biomass. FRP measures the radiant energy released per time unit by burning vegetation. This study aims to use satellite and field data to estimate the biomass consumption rate and the biomass consumption coefficient for the southern Brazilian grasslands. Three fire points were identified in satellite FRP products. These data were combined with field data, collected through literature review, to calculate the biomass consumption coefficient. The type of vegetation is an important variable in the estimation of the biomass consumption coefficient. The biomass consumption rate was estimated to be 2.237 kg s-1 for the southern Brazilian grasslands in Atlantic Forest biome, and the biomass consumption coefficient was estimated to be 0.242 kg MJ-1.

  16. Cross-biome metagenomic analyses of soil microbial communities and their functional attributes.

    Science.gov (United States)

    Fierer, Noah; Leff, Jonathan W; Adams, Byron J; Nielsen, Uffe N; Bates, Scott Thomas; Lauber, Christian L; Owens, Sarah; Gilbert, Jack A; Wall, Diana H; Caporaso, J Gregory

    2012-12-26

    For centuries ecologists have studied how the diversity and functional traits of plant and animal communities vary across biomes. In contrast, we have only just begun exploring similar questions for soil microbial communities despite soil microbes being the dominant engines of biogeochemical cycles and a major pool of living biomass in terrestrial ecosystems. We used metagenomic sequencing to compare the composition and functional attributes of 16 soil microbial communities collected from cold deserts, hot deserts, forests, grasslands, and tundra. Those communities found in plant-free cold desert soils typically had the lowest levels of functional diversity (diversity of protein-coding gene categories) and the lowest levels of phylogenetic and taxonomic diversity. Across all soils, functional beta diversity was strongly correlated with taxonomic and phylogenetic beta diversity; the desert microbial communities were clearly distinct from the nondesert communities regardless of the metric used. The desert communities had higher relative abundances of genes associated with osmoregulation and dormancy, but lower relative abundances of genes associated with nutrient cycling and the catabolism of plant-derived organic compounds. Antibiotic resistance genes were consistently threefold less abundant in the desert soils than in the nondesert soils, suggesting that abiotic conditions, not competitive interactions, are more important in shaping the desert microbial communities. As the most comprehensive survey of soil taxonomic, phylogenetic, and functional diversity to date, this study demonstrates that metagenomic approaches can be used to build a predictive understanding of how microbial diversity and function vary across terrestrial biomes.

  17. Detection of wild animals as carriers of Leptospira by PCR in the Pantanal biome, Brazil.

    Science.gov (United States)

    Vieira, Anahi S; Narduche, Lorena; Martins, Gabriel; Schabib Péres, Igor A H F; Zimmermann, Namor P; Juliano, Raquel S; Pellegrin, Aiesca O; Lilenbaum, Walter

    2016-11-01

    Leptospiral infection is widespread in wildlife. In this context, wild ecosystems in tropical countries hold a vast biodiversity, including several species that may act as potential reservoirs of leptospires. The Pantanal biome presents highly favorable environmental conditions for the occurrence of leptospirosis, such as high temperatures, constant flooding, and high biodiversity. The purpose of this study was to detect wild animals as carriers of Leptospira sp. using direct methods (PCR and culture) in the Pantanal biome, Brazil. A total of 35 animals were studied, namely Cerdocyon thous, Nasua nasua, Ozotoceros bezoarticus, and Sus scrofa species. Blood for serology (MAT) and urine for bacteriological culturing and PCR was sampled. The most prevalent serogroups were Javanica and Djasiman. Additionally, 40.6% of these animals presented PCR positive reactions. Seroreactivity associated with the high frequency of leptospiral carriers among the different studied species suggests a high level of exposure of the studied animals to pathogenic Leptospira strains. Our results are still limited and the actual role of the studied animals in the epidemiology of leptospirosis in the Pantanal region remains to be elucidated. Copyright © 2016 Elsevier B.V. All rights reserved.

  18. Temporal profiles of vegetation indices for characterizing grazing intensity on natural grasslands in Pampa biome

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    Amanda Heemann Junges

    2016-08-01

    Full Text Available ABSTRACT The Pampa biome is an important ecosystem in Brazil that is highly relevant to livestock production. The objective of this study was to analyze the potential use of vegetation indices to discriminate grazing intensities on natural grasslands in the Pampa biome. Moderate Resolution Imaging Spectroradiometer (MODIS Normalized Difference Vegetation Index (NDVI and Enhanced Vegetation Index (EVI images from Jan to Dec, 2000 to 2013 series, were analyzed for natural grassland experimental units managed under high (forage allowance of 5 ± 2 % live weight – LW, moderate (13 ± 5 % LW and low grazing intensity (19 ± 7 % LW. Regardless of intensity, the temporal profiles showed lower NDVI and EVI during winter, increased values in spring because of summer species regrowth, slightly decreased values in summer, especially in years when there is a water deficit, and increased values in the fall associated with the beginning of winter forage development. The average temporal profiles of moderate grazing intensity exhibited greater vegetation index values compared with low and high grazing intensities. The temporal profiles of less vegetation index were associated with lower green biomass accumulation caused by the negative impact of stocking rates on the leaf area index under high grazing intensity and a floristic composition with a predominance of tussocks under low grazing intensity. Vegetation indices can be used for distinguishing moderate grazing intensity from low and high intensities. The average EVI values can discriminate moderate grazing intensity during any season, and the NDVI values can discriminate moderate grazing intensity during spring and winter.

  19. Above- and Belowground Biomass Allocation in Shrub Biomes across the Northeast Tibetan Plateau

    Science.gov (United States)

    Yang, Yuanhe; Yang, Lucun; Zhou, Guoying

    2016-01-01

    Biomass partitioning has been explored across various biomes. However, the strategies of allocation in plants still remain contentious. This study investigated allocation patterns of above- and belowground biomass at the community level, using biomass survey from the Tibetan Plateau. We explored above- and belowground biomass by conducting three consecutive sampling campaigns across shrub biomes on the northeast Tibetan Plateau during 2011–2013. We then documented the above-ground biomass (AGB), below-ground biomass (BGB) and root: shoot ratio (R/S) and the relationships between R/S and environment factors using data from 201 plots surveyed from 67 sites. We further examined relationships between above-ground and below-ground biomass across various shrub types. Our results indicated that the median values of AGB, BGB, and R/S in Tibetan shrub were 1102.55, 874.91 g m-2, and 0.85, respectively. R/S showed significant trend with mean annual precipitation (MAP), while decreased with mean annual temperature (MAT). Reduced major axis analysis indicated that the slope of the log-log relationship between above- and belowground biomass revealed a significant difference from 1.0 over space, supporting the optimal hypothesis. Interestingly, the slopes of the allometric relationship between log AGB and log BGB differed significantly between alpine and desert shrub. Our findings supported the optimal theory of above- and belowground biomass partitioning in Tibetan shrub, while the isometric hypothesis for alpine shrub at the community level. PMID:27119379

  20. The deforestation story: testing for anthropogenic origins of Africa's flammable grassy biomes.

    Science.gov (United States)

    Bond, William; Zaloumis, Nicholas P

    2016-06-05

    Africa has the most extensive C4 grassy biomes of any continent. They are highly flammable accounting for greater than 70% of the world's burnt area. Much of Africa's savannas and grasslands occur in climates warm enough and wet enough to support closed forests. The combination of open grassy systems and the frequent fires they support have long been interpreted as anthropogenic artefacts caused by humans igniting frequent fires. True grasslands, it was believed, would be restricted to climates too dry or too cold to support closed woody vegetation. The idea that higher-rainfall savannas are anthropogenic and that fires are of human origin has led to initiatives to 'reforest' Africa's open grassy systems paid for by carbon credits under the assumption that the net effect of converting these system to forests would sequester carbon, reduce greenhouse gases and mitigate global warming. This paper reviews evidence for the antiquity of African grassy ecosystems and for the fires that they sustain. Africa's grassy biomes and the fires that maintain them are ancient and there is no support for the idea that humans caused large-scale deforestation. Indicators of old-growth grasslands are described. These can help distinguish secondary grasslands suitable for reforestation from ancient grasslands that should not be afforested.This article is part of the themed issue 'The interaction of fire and mankind'. © 2016 The Author(s).

  1. Contribution to the discussions on the origin of the cerrado biome: Brazilian savanna

    Directory of Open Access Journals (Sweden)

    MHO. Pinheiro

    Full Text Available Theories that attempt to explain the origin of the cerrado biome are mostly based on the isolated action of three major factors: climate, fire and soil. Another factor that has been mentioned is that of human interference. We hypothesise that the evolutionary origin of this biome resulted from the complex interaction of climate, fire and soil, with climate being the triggering agent of this assumed interaction. Fire, as well as acid and dystrophic soils, would be factors involved in the selection of savanna species throughout climatic events, during the Tertiary and the Quaternary, e.g. Pliocene and Pleistocene. The genesis of the physiognomies that would give rise to cerrado sensu lato, rather than forest formations, could have occurred due to the strong pressure exerted by the reduction in water availability, and the selection of the species adapted to the new conditions imposed by the environment. The characteristics of cerrado sensu lato soil, originated from edaphic impoverishment caused by lixiviation and successive past fires, would remain, even after hydric availability increased following the Pleistocene glaciations.

  2. NDVI and meteorological data as indicators of the Pampa biome natural grasslands growth

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    Denise Cybis Fontana

    2018-04-01

    Full Text Available ABSTRACT The present study aimed to characterize the dynamics of NDVI and meteorological conditions, relating both to the annual dynamics of biomass accumulation in natural pastures of the Pampa biome as a way of subsidizing growth modeling. Forage accumulation rate data from a long-term experiment, NDVI data from the MODIS images, and meteorological data measured at the surface were used. We verify that the agrometeorological element associated to the accumulation of forage in the natural grasslands is different according to the season, which is typical of the subtropical climate. Winter is the critical season for livestock production due to the lower forage accumulation rate and lower values of NDVI, conditioned by the decrease of solar radiation and air temperature. In the summer, the limiting factor to forage accumulation is the hydric condition. It was also verified that the variability in the growth of grasslands can be associated with the ENSO phenomenon, being the El Niño favorable and the La Niña unfavorable, especially in the spring-summer period. Considering the verified associations, spectral indices combined with agrometeorological elements are recommended to the adjustment of models of forage accumulation in the Pampa biome natural grasslands.

  3. Feedbacks between land cover and climate changes in the Brazilian Amazon and Cerrado biomes

    Science.gov (United States)

    Coe, M. T.; Silverio, D. V.; Bustamante, M.; Macedo, M.; Shimbo, J.; Brando, P. M.

    2016-12-01

    An estimated 20% of Amazon forests and 45% of Cerrado savannas have been cleared to make way for the expansion of croplands and pasturelands in Brazil. Although deforestation rates have decreased or remained steady over the last decade, the cumulative area deforested continues to grow in both biomes. These land-use transitions are expected to influence regional climate by reducing evapotranspiration (ET), increasing land surface temperatures (LST), and ultimately reducing regional precipitation. Here we present results from spatial analyses to quantify the impact of land-use transitions on the regional climate of the Amazon-Cerrado agricultural frontier. The analyses combine satellite observations and model outputs from the MODIS dataset. Results from the southeastern Amazon indicate that transitions from forest to pasture or cropland decreased mean annual ET (by 24% and 32%, respectively) and increased LST (by 4.2°C and 6.4°C). Preliminary results from the Cerrado indicate that transitions from woody savannas to pasture or cropland also result in substantial reductions in mean annual ET (23% and 20%, respectively) and increases in LST (by 1.6°C in both cases). These results reinforce the need to better understand how land-use change at regional scales may alter climate by changing ecosystem properties (beyond carbon stocks and fluxes). It is important to evaluate these responses across different biomes, particularly in tropical regions under increasing deforestation pressure.

  4. Cities as Novel Biomes;Recognizing Urban Ecosystem Services as Anthropogenic

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    Stephanie ePincetl

    2015-12-01

    Full Text Available Urban Ecosystem Science is now an established science, arising along side the historic shift of humans to becoming in majority urban dwellers. In this Perspective I suggest there is a need to develop a new framework for UES as embedded in distinct urban biomes that can be classified by city-type and typologized. UES are largely the artifact of human decision making from what to plant where, to determining the urban infrastructure type in which UES will be placed. Developing urban typologies by climate zone, level of development, size and history will better enable the understanding of UES. I attempt to show the rise of the importance of nature, and of urban nature following the development of industrial city, and the importance of human intent in creating these urban ecosystems over time. If humans choose to manage cities through increasing UES, this will require coupled shifts, the shift in rules and regulations, goals and processes and shifts in urban form, infrastructure and function – socio-technical-ecological changes – driven by human decision-making. Such efforts will vary widely by city -- by urban biome.

  5. A biome-scale assessment of the impact of invasive alien plants on ecosystem services in South Africa.

    Science.gov (United States)

    van Wilgen, B W; Reyers, B; Le Maitre, D C; Richardson, D M; Schonegevel, L

    2008-12-01

    This paper reports an assessment of the current and potential impacts of invasive alien plants on selected ecosystem services in South Africa. We used data on the current and potential future distribution of 56 invasive alien plant species to estimate their impact on four services (surface water runoff, groundwater recharge, livestock production and biodiversity) in five terrestrial biomes. The estimated reductions in surface water runoff as a result of current invasions were >3000 million m(3) (about 7% of the national total), most of which is from the fynbos (shrubland) and grassland biomes; the potential reductions would be more than eight times greater if invasive alien plants were to occupy the full extent of their potential range. Impacts on groundwater recharge would be less severe, potentially amounting to approximately 1.5% of the estimated maximum reductions in surface water runoff. Reductions in grazing capacity as a result of current levels of invasion amounted to just over 1% of the potential number of livestock that could be supported. However, future impacts could increase to 71%. A 'biodiversity intactness index' (the remaining proportion of pre-modern populations) ranged from 89% to 71% for the five biomes. With the exception of the fynbos biome, current invasions have almost no impact on biodiversity intactness. Under future levels of invasion, however, these intactness values decrease to around 30% for the savanna, fynbos and grassland biomes, but to even lower values (13% and 4%) for the two karoo biomes. Thus, while the current impacts of invasive alien plants are relatively low (with the exception of those on surface water runoff), the future impacts could be very high. While the errors in these estimates are likely to be substantial, the predicted impacts are sufficiently large to suggest that there is serious cause for concern.

  6. Structural development and web service based sensitivity analysis of the Biome-BGC MuSo model

    Science.gov (United States)

    Hidy, Dóra; Balogh, János; Churkina, Galina; Haszpra, László; Horváth, Ferenc; Ittzés, Péter; Ittzés, Dóra; Ma, Shaoxiu; Nagy, Zoltán; Pintér, Krisztina; Barcza, Zoltán

    2014-05-01

    Studying the greenhouse gas exchange, mainly the carbon dioxide sink and source character of ecosystems is still a highly relevant research topic in biogeochemistry. During the past few years research focused on managed ecosystems, because human intervention has an important role in the formation of the land surface through agricultural management, land use change, and other practices. In spite of considerable developments current biogeochemical models still have uncertainties to adequately quantify greenhouse gas exchange processes of managed ecosystem. Therefore, it is an important task to develop and test process-based biogeochemical models. Biome-BGC is a widely used, popular biogeochemical model that simulates the storage and flux of water, carbon, and nitrogen between the ecosystem and the atmosphere, and within the components of the terrestrial ecosystems. Biome-BGC was originally developed by the Numerical Terradynamic Simulation Group (NTSG) of University of Montana (http://www.ntsg.umt.edu/project/biome-bgc), and several other researchers used and modified it in the past. Our research group developed Biome-BGC version 4.1.1 to improve essentially the ability of the model to simulate carbon and water cycle in real managed ecosystems. The modifications included structural improvements of the model (e.g., implementation of multilayer soil module and drought related plant senescence; improved model phenology). Beside these improvements management modules and annually varying options were introduced and implemented (simulate mowing, grazing, planting, harvest, ploughing, application of fertilizers, forest thinning). Dynamic (annually varying) whole plant mortality was also enabled in the model to support more realistic simulation of forest stand development and natural disturbances. In the most recent model version separate pools have been defined for fruit. The model version which contains every former and new development is referred as Biome-BGC MuSo (Biome

  7. Análisis comparativo de distintas toolkits para el reconocimiento biométrico de personas mediante voz

    OpenAIRE

    Ruíz, Silvia; Miranda, Ernesto; Herlein, Mauro; Etchart, Graciela; Alvez, Carlos E.

    2017-01-01

    El objetivo de este trabajo es realizar un análisis comparativo de distintas toolkits para el reconocimiento biométrico de personas mediante voz. Hoy en día los sistemas de identificación de personas se han convertido en una necesidad para la sociedad. A medida que avanza la tecnología y la aplicación de la misma en entornos tanto de ocio como de seguridad, la evolución en desarrollo biométrico es muy grande. Los sistemas de identificación o verificación tradicionales (tarjetas o claves) se h...

  8. Improved clonality detection in B-cell lymphoma using a semi-nested modification of the BIOMED-2 PCR assay for IGH rearrangement: A paraffin-embedded tissue study.

    Science.gov (United States)

    Sakamoto, Yuma; Masaki, Ayako; Aoyama, Satsuki; Han, Shusen; Saida, Kosuke; Fujii, Kana; Takino, Hisashi; Murase, Takayuki; Iida, Shinsuke; Inagaki, Hiroshi

    2017-09-01

    The BIOMED-2 PCR protocol for targeting the IGH gene is widely employed for detecting clonality in B-cell malignancies. Unfortunately, the detection of clonality with this method is not very sensitive when paraffin sections are used as a DNA source. To increase the sensitivity, we devised a semi-nested modification of a JH consensus primer. The clonality detection rates of three assays were compared: the standard BIOMED-2, BIOMED-2 assay followed by BIOMED-2 re-amplification, and BIOMED-2 assay followed by semi-nested BIOMED-2. We tested more than 100 cases using paraffin-embedded tissues of various B-cell lymphomas, and found that the clonality detection rates with the above three assays were 63.9%, 79.6%, and 88.0%, respectively. While BIOMED-2 re-amplification was significantly more sensitive than the standard BIOMED-2, the semi-nested BIOMED-2 was significantly more sensitive than both the standard BIOMED-2 and BIOMED-2 re-amplification. An increase in sensitivity was observed in all lymphoma subtypes examined. In conclusion, tumor clonality may be detected in nearly 90% of B-cell lymphoma cases with semi-nested BIOMED-2. This ancillary assay may be useful when the standard BIOMED-2 fails to detect clonality in histopathologically suspected B-cell lymphomas. © 2017 Japanese Society of Pathology and John Wiley & Sons Australia, Ltd.

  9. Plant litter dynamics in the forest-stream interface: precipitation is a major control across tropical biomes.

    Science.gov (United States)

    Tonin, Alan M; Gonçalves, José F; Bambi, Paulino; Couceiro, Sheyla R M; Feitoza, Lorrane A M; Fontana, Lucas E; Hamada, Neusa; Hepp, Luiz U; Lezan-Kowalczuk, Vânia G; Leite, Gustavo F M; Lemes-Silva, Aurea L; Lisboa, Leonardo K; Loureiro, Rafael C; Martins, Renato T; Medeiros, Adriana O; Morais, Paula B; Moretto, Yara; Oliveria, Patrícia C A; Pereira, Evelyn B; Ferreira, Lidiane P; Pérez, Javier; Petrucio, Mauricio M; Reis, Deusiano F; S Rezende, Renan; Roque, Nadia; Santos, Luiz E P; Siegloch, Ana E; Tonello, Gabriela; Boyero, Luz

    2017-09-07

    Riparian plant litter is a major energy source for forested streams across the world and its decomposition has repercussions on nutrient cycling, food webs and ecosystem functioning. However, we know little about plant litter dynamics in tropical streams, even though the tropics occupy 40% of the Earth's land surface. Here we investigated spatial and temporal (along a year cycle) patterns of litter inputs and storage in multiple streams of three tropical biomes in Brazil (Atlantic forest, Amazon forest and Cerrado savanna), predicting major differences among biomes in relation to temperature and precipitation regimes. Precipitation explained most of litter inputs and storage, which were generally higher in more humid biomes (litterfall: 384, 422 and 308 g m -2 y -1 , storage: 55, 113 and 38 g m -2 , on average in Atlantic forest, Amazon and Cerrado, respectively). Temporal dynamics varied across biomes in relation to precipitation and temperature, with uniform litter inputs but seasonal storage in Atlantic forest streams, seasonal inputs in Amazon and Cerrado streams, and aseasonal storage in Amazon streams. Our findings suggest that litter dynamics vary greatly within the tropics, but point to the major role of precipitation, which contrasts with the main influence of temperature in temperate areas.

  10. Tropical rainforest biome of Biosphere 2. Structure, composition and results of the first 2 years of operation

    Energy Technology Data Exchange (ETDEWEB)

    Leigh, Linda S. [Systems Ecology and Energy Analysis Program, Department of Environmental Engineering Sciences, University of Florida, Gainesville, FL (United States); Burgess, Tony; Marino, Bruno D.V.; Wei, Yong Dan [Biosphere 2 Center, Inc. P.O. Box 689, Oracle, AZ (United States)

    1999-06-01

    The tropical rainforest biome in the Biosphere 2 mesocosm was managed with rainfall and temperature conditions to simulate a natural rainforest typical of the new world tropics. The establishment of the biome was based on the introduction of excessive numbers of species allowing self-organization of an ecologically unique rainforest. Over 282 species of plants from rainforest areas were planted within the topographically diverse rainforest biome (area of 1900 m{sup 2}, volume of 35,000 m{sup 3}), just before the Biosphere 2 closure in 1991. Approximately 61% of these species survived when counted in 1993, representing a plant species richness reduction to 172 species in 0.19 hectare. Rank order graphs show that a high diversity community resulted not unlike insular rainforests. The plants of the rainforest mesocosm, however, grew under anomalous conditions of soil (amended desert grassland soil), atmospheric composition (CO{sub 2} up to 4500 ppm by volume (ppmv)) and rainwater composition (high salinity and nutrients). Stem growth rates of a dominant canopy tree, Cecropia, were up to four times higher but had reduced diameter at breast height compared to natural counterparts. Human intervention in plant succession was also an important factor in shaping the ecology of the rainforest biome of Biosphere 2

  11. Adapting the Biome-BGC Model to New Zealand Pastoral Agriculture: Climate Change and Land-Use Change

    Science.gov (United States)

    Keller, E. D.; Baisden, W. T.; Timar, L.

    2011-12-01

    We have adapted the Biome-BGC model to make climate change and land-use scenario estimates of New Zealand's pasture production in 2020 and 2050, with comparison to a 2005 baseline. We take an integrated modelling approach with the aim of enabling the model's use for policy assessments across broadly related issues such as climate change mitigation and adaptation, land-use change, and greenhouse gas projections. The Biome-BGC model is a biogeochemical model that simulates carbon, water, and nitrogen cycles in terrestrial ecosystems. We introduce two new 'ecosystems', sheep/beef and dairy pasture, within the existing structure of the Biome-BGC model and calibrate its ecophysiological parameters against pasture clipping data from diverse sites around New Zealand to form a baseline estimate of total New Zealand pasture production. Using downscaled AR4 climate projections, we construct mid- and upper-range climate change scenarios in 2020 and 2050. We produce land-use change scenarios in the same years by combining the Biome-BGC model with the Land Use in Rural New Zealand (LURNZ) model. The LURNZ model uses econometric approaches to predict future land-use change driven by changes in net profits driven by expected pricing, including the introduction of an emission trading system. We estimate the relative change in national pasture production from our 2005 baseline levels for both sheep/beef and dairy systems under each scenario.

  12. Scaling net ecosystem production and net biome production over a heterogeneous region in the Western United States

    Science.gov (United States)

    D.P. Turner; W.D. Ritts; B.E. Law; W.B. Cohen; Z. Yan; T. Hudiburg; J.L. Campbell; M. Duane

    2007-01-01

    Bottom-up scaling of net ecosystem production (NEP) and net biome production (NBP) was used to generate a carbon budget for a large heterogeneous region (the state of Oregon, 2.5x105 km2 ) in the Western United States. Landsat resolution (30 m) remote sensing provided the basis for mapping land cover and disturbance history...

  13. A remarkable finding that suggests the existence of a new groundwater biome based on chemoautotrophic resources, named

    Directory of Open Access Journals (Sweden)

    Ştefan Negrea

    2009-01-01

    Full Text Available An important work of subterranean biology, signed by Francis Dov Por, Ophel: a groundwater biome based on chemoautotrophic resources. The global significance of the Ayyalon cave finds, Israel is presented and discussed in the present paper. The subject is a remarkable discovery suggesting the existence of a new aquatic subterranean biome autonomous energy based the author calls Ophel, the Hebrew word for “darkness” and “netherworld”. For F.D. Por, this biome links different marine chemosynthetic ecosystems in a global biospheric entity. Finally, F.D. POR hypothesizes on the existence of three overlapped biospheres: the bacteriosphere in the depths of the planet’s crust, which does not require light or oxygen; the aphotic, subterranean deuterobiosphere, formed of bacterial chemosynthesis based eukaryotes and limited-supplied dissolved oxygen from above-ground; the above-ground eubiosphere, based on aerobic photosynthesis. I would like to emphasize that, at my suggestion, Prof. Dr. F.D. Por participated at the 18th International Symposium of Biospeleology from Cluj-Napoca (Romania at 10th to 15th July 2006 where he mentioned for the first time orally some data on the Ayyalon Cave and the Ophel biome.

  14. Physiology of Saccharomyces cerevisiae strains isolated from Brazilian biomes: new insights into biodiversity and industrial applications

    DEFF Research Database (Denmark)

    Beato, Felipe B.; Bergdahl, Basti; Rosa, Carlos A.

    2016-01-01

    Fourteen indigenous Saccharomyces cerevisiae strains isolated from the barks of three tree species located in the Atlantic Rain Forest and Cerrado biomes in Brazil were genetically and physiologically compared to laboratory strains and to strains from the Brazilian fuel ethanol industry. Although...

  15. Modeling impacts of human footprint and soil variability on the potential distribution of invasive plant species in different biomes

    Science.gov (United States)

    Wan, Ji-Zhong; Wang, Chun-Jing; Yu, Fei-Hai

    2017-11-01

    Human footprint and soil variability may be important in shaping the spread of invasive plant species (IPS). However, until now, there is little knowledge on how human footprint and soil variability affect the potential distribution of IPS in different biomes. We used Maxent modeling to project the potential distribution of 29 IPS with wide distributions and long introduction histories in China based on various combinations of climatic correlates, soil characteristics and human footprint. Then, we evaluated the relative importance of each type of environmental variables (climate, soil and human footprint) as well as the difference in range and similarity of the potential distribution of IPS between different biomes. Human footprint and soil variables contributed to the prediction of the potential distribution of IPS, and different types of biomes had varying responses and degrees of impacts from the tested variables. Human footprint and soil variability had the highest tendency to increase the potential distribution of IPS in Montane Grasslands and Shrublands. We propose to integrate the assessment in impacts of human footprint and soil variability on the potential distribution of IPS in different biomes into the prevention and control of plant invasion.

  16. A method to determine warm and cool steppe biomes from pollen data; application to the Mediterranean and Kazakhstan regions

    NARCIS (Netherlands)

    Tarasov, PE; Cheddadi, R; Guiot, J; Bottema, S; Peyron, O; Belmonte, J; Ruiz-Sanchez, [No Value; Saadi, F; Brewer, S

    1998-01-01

    An objective method for the assignment of pollen spectra to appropriate biomes has been published recently. The aim of this paper is to improve the distinction between warm and cool steppes, thus refining vegetation and climate reconstruction, particularly during the Last Glacial Maximum. A set of

  17. The global extent and determinants of savanna and forest as alternative biome states.

    Science.gov (United States)

    Staver, A Carla; Archibald, Sally; Levin, Simon A

    2011-10-14

    Theoretically, fire-tree cover feedbacks can maintain savanna and forest as alternative stable states. However, the global extent of fire-driven discontinuities in tree cover is unknown, especially accounting for seasonality and soils. We use tree cover, climate, fire, and soils data sets to show that tree cover is globally discontinuous. Climate influences tree cover globally but, at intermediate rainfall (1000 to 2500 millimeters) with mild seasonality (less than 7 months), tree cover is bimodal, and only fire differentiates between savanna and forest. These may be alternative states over large areas, including parts of Amazonia and the Congo. Changes in biome distributions, whether at the cost of savanna (due to fragmentation) or forest (due to climate), will be neither smooth nor easily reversible.

  18. BOREAS RSS-8 BIOME-BGC SSA Simulation of Annual Water and Carbon Fluxes

    Science.gov (United States)

    Hall, Forrest G. (Editor); Nickeson, Jaime (Editor); Kimball, John

    2000-01-01

    The BOREAS RSS-8 team performed research to evaluate the effect of seasonal weather and landcover heterogeneity on boreal forest regional water and carbon fluxes using a process-level ecosystem model, BIOME-BGC, coupled with remote sensing-derived parameter maps of key state variables. This data set contains derived maps of landcover type and crown and stem biomass as model inputs to determine annual evapotranspiration, gross primary production, autotrophic respiration, and net primary productivity within the BOREAS SSA-MSA, at a 30-m spatial resolution. Model runs were conducted over a 3-year period from 1994-1996; images are provided for each of those years. The data are stored in binary image format. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

  19. Overview on Environmental Comprehensive Management System Established in Imitation of Biome

    Institute of Scientific and Technical Information of China (English)

    李如燕; 孙可伟

    2004-01-01

    Environmental comprehensive management system, called "the bionic community", can be established in imitation of biome, which can transform the wastes generated in a certain field into the raw materials of other field. The establishment of the bionic community includes two aspects, i.e. , the matching technique and the management system. The main matching technique is the preparation of composite materials made of various wastes.This new kind of material can be divided into four types: polymer matrix, silicate matrix, metal matrix and carbon matrix (or ceramic matrix). The environmental comprehensive management system is formed by organizing a transtrades joint-management business entity with the products of composite material made of wastes at the core.

  20. Biométria de frutos e sementes de Luetzelburgia auriculata (Allemão Ducke

    Directory of Open Access Journals (Sweden)

    Roberto Ferreira Barroso

    2016-12-01

    Full Text Available A Caatinga apresenta uma grande diversidade de espécies vegetais, dentre elas Luetzelburgia auriculata é uma das espécies predominantes no bioma, desempenhando papel fundamental para o ecossistema local. Este trabalho objetivou descrever as características biométricas de frutos e sementes de Luetzelburgia auriculata.  Para a descrição das características da semente foram coletados 200 frutos e 200 sementes de plantas nativas do município de Santa Helena, Paraíba. As amostras foram encaminhadas ao Laboratório de Nutrição Mineral de Plantas do Centro de Saúde e Tecnologia Rural de Universidade Federal de Campina Grande para a realização das devidas aferições biométricas. Os frutos foram analisado pelo comprimento, espessura superior, mediana e inferior; largura superior, mediana e inferior. Para as sementes, foram analisados comprimento, espessura e a largura. Verificou-se que o comprimento dos frutos variou de 50,7 a 98,2 cm, a espessura de 6,00 a 17 mm e largura variando de 12,4 a 21,8 mm. Em relação às sementes, 46% se enquadraram na classe de comprimento com intervalo de 19,9 a 20,8 mm. A espécie Luetzelburgia auriculata apresentam variabilidade nas características biométricas de frutos e sementesBiometrics of fruit and seeds of Luetzelburgia auriculata (Allemão DuckeAbstract: The Caatinga presents a great diversity of plant species, among them the woodpecker (Luetzelburgia auriculata (Allemao Ducke. is one of the predominant species in the biome, playing a fundament al role for the local ecosystem. This work aimed to describe the biometric characteristics of fruits and seeds of Pau de Pedra. For the description of the characteristics of the Luetzelburgia auriculata (Allemão Ducke seed, 200 fruits and 200 seeds of native plants of the municipality of Santa Helena, Paraíba state were collected for biometry and seed mass. Afterwards they were packed in plastic bags and properly identified and taken to Laboratório de

  1. Autenticación mediante parámetros biométricos

    OpenAIRE

    Pastor Navarro, Ricard

    2017-01-01

    En les pàgines següents s’explicarà el procés seguit per la realització d’aquest treball de final de grau, en el que es pretén substituir, en un programa de gestió de contrasenyes, la contrasenya mestre per paràmetres biomètrics, concretament el reconeixement facial. Per a complir amb aquest objectiu s’utilitzaran alguns algoritmes de visió per computador extrets de les llibreries de OpenCV. El sistema final agafarà imatges de l’usuari i fent la comprovació del usuari decidint si ha de donar ...

  2. Genetic Divergence in Eucalyptus camaldulensis Progenies in the Savanna Biome in Mato Grosso, Brazil.

    Directory of Open Access Journals (Sweden)

    Reginaldo Brito da Costa

    Full Text Available Assessing the parental genetic differences and their subsequent prediction of progeny performance is an important first step to assure the efficiency of any breeding program. In this study, we estimate the genetic divergence in Eucalyptus camaldulensis based on the morphological traits of 132 progenies grown in a savanna biome. Thus, a field experiment was performed using a randomized block design and five replications to compare divergences in total height, commercial height, diameter at breast height, stem form and survival rate at 48 months. Tocher's clustering method was performed using the Mahalanobis and Euclidian distances. The Mahalanobis distance seemed more reliable for the assessed parameters and clustered all of the progenies into fourteen major groups. The most similar progenies (86 accessions were clustered into Group I, while the most dissimilar (1 progeny represented Group XIV. The divergence analysis indicated that promising crosses could be made between progenies allocated in different groups for high genetic divergence and for favorable morphological traits.

  3. Tundra biome research in Alaska: the structure and function of cold-dominated ecosystems

    Energy Technology Data Exchange (ETDEWEB)

    Brown, J.; West, G.C.

    1970-11-01

    The objective of the Tundra Biome Program is to acquire a basic understanding of tundra, both alpine and arctic, and taiga. Collectively these are referred to as the cold-dominated ecosystems. The program's broad objectives are threefold: To develop a predictive understanding of how the wet arctic tundra ecosystem operates, particularly as exemplified in the Barrow, Alaska, area; to obtain the necessary data base from the variety of cold-dominated ecosystem types represented in the United States, so that their behavior can be modeled and simulated, and the results compared with similar studies underway in other circumpolar countries; to bring basic environmental knowledge to bear on problems of degradation, maintenance, and restoration of the temperature-sensitive and cold-dominated tundra/taiga ecosystems. (GRA)

  4. Microbial Community Profile and Water Quality in a Protected Area of the Caatinga Biome.

    Science.gov (United States)

    Lopes, Fabyano Alvares Cardoso; Catão, Elisa Caldeira Pires; Santana, Renata Henrique; Cabral, Anderson de Souza; Paranhos, Rodolfo; Rangel, Thiago Pessanha; de Rezende, Carlos Eduardo; Edwards, Robert A; Thompson, Cristiane C; Thompson, Fabiano L; Kruger, Ricardo Henrique

    2016-01-01

    The Caatinga is a semi-arid biome in northeast Brazil. The Paraguaçú River is located in the Caatinga biome, and part of its course is protected by the National Park of Chapada Diamantina (PNCD). In this study we evaluated the effect of PNCD protection on the water quality and microbial community diversity of this river by analyzing water samples obtained from points located inside and outside the PNCD in both wet and dry seasons. Results of water quality analysis showed higher levels of silicate, ammonia, particulate organic carbon, and nitrite in samples from the unprotected area compared with those from protected areas. Pyrosequencing of the 16S rRNA genes revealed that Burkholderiales was abundant in samples from all three sites during both seasons and was represented primarily by the genus Polynucleobacter and members of the Comamonadaceae family (e.g., genus Limnohabitans). During the dry season, the unprotected area showed a higher abundance of Flavobacterium sp. and Arthrobacter sp., which are frequently associated with the presence and/or degradation of arsenic and pesticide compounds. In addition, genes that appear to be related to agricultural impacts on the environment, as well as those involved in arsenic and cadmium resistance, copper homeostasis, and propanediol utilization, were detected in the unprotected areas by metagenomic sequencing. Although PNCD protection improves water quality, agricultural activities around the park may affect water quality within the park and may account for the presence of bacteria capable of pesticide degradation and assimilation, evidencing possible anthropogenic impacts on the Caatinga.

  5. Trans-biome diversity in Australian grass-specialist lizards (Diplodactylidae: Strophurus).

    Science.gov (United States)

    Laver, Rebecca J; Nielsen, Stuart V; Rosauer, Dan F; Oliver, Paul M

    2017-10-01

    Comparisons of biodiversity patterns within lineages that occur across major climate gradients and biomes, can provide insights into the relative roles that lineage history, landscape and climatic variation, and environmental change have played in shaping regional biotas. In Australia, while there has been extensive research into the origins and patterns of diversity in the Australian Arid Zone (AAZ), how diversity is distributed across this biome and the Australian Monsoonal Tropics (AMT) to the north, has been less studied. We compared the timing and patterns of diversification across this broad aridity gradient in a clade of lizards (Strophurus: phasmid geckos) that only occur in association with a unique Australian radiation of sclerophyllous grasses (Triodia: spinifex). Our results indicate that overall genetic diversity is much higher, older and more finely geographically structured within the AMT, including distantly related clades endemic to the sandstone escarpments of the Kimberley and Arnhem Plateau. Niche modelling analyses also suggest that the distribution of taxa in the AMT is more strongly correlated with variation in topographic relief than in the AAZ. The two broad patterns that we recovered - (i) lineage endemism increases as latitude decreases, and (ii) endemism is tightly correlated to rocky regions - parallel and corroborate other recent studies of habitat generalists and specialised saxicoline lineages occurring across these same regions. Early Miocene diversification estimates also suggest that, soon after Triodia grasses colonised Australia and began to diversify in the Miocene, phasmid geckos with Gondwanan ancestry shifted into these grasses, and have subsequently remained closely associated with this unique vegetation type. Copyright © 2017 Elsevier Inc. All rights reserved.

  6. Biome-scale nitrogen fixation strategies selected by climatic constraints on nitrogen cycle.

    Science.gov (United States)

    Sheffer, Efrat; Batterman, Sarah A; Levin, Simon A; Hedin, Lars O

    2015-11-23

    Dinitrogen fixation by plants (in symbiosis with root bacteria) is a major source of new nitrogen for land ecosystems(1). A long-standing puzzle(2) is that trees capable of nitrogen fixation are abundant in nitrogen-rich tropical forests, but absent or restricted to early successional stages in nitrogen-poor extra-tropical forests. This biome-scale pattern presents an evolutionary paradox(3), given that the physiological cost(4) of nitrogen fixation predicts the opposite pattern: fixers should be out-competed by non-fixers in nitrogen-rich conditions, but competitively superior in nitrogen-poor soils. Here we evaluate whether this paradox can be explained by the existence of different fixation strategies in tropical versus extra-tropical trees: facultative fixers (capable of downregulating fixation(5,6) by sanctioning mutualistic bacteria(7)) are common in the tropics, whereas obligate fixers (less able to downregulate fixation) dominate at higher latitudes. Using a game-theoretic approach, we assess the ecological and evolutionary conditions under which these fixation strategies emerge, and examine their dependence on climate-driven differences in the nitrogen cycle. We show that in the tropics, transient soil nitrogen deficits following disturbance and rapid tree growth favour a facultative strategy and the coexistence of fixers and non-fixers. In contrast, sustained nitrogen deficits following disturbance in extra-tropical forests favour an obligate fixation strategy, and cause fixers to be excluded in late successional stages. We conclude that biome-scale differences in the abundance of nitrogen fixers can be explained by the interaction between individual plant strategies and climatic constraints on the nitrogen cycle over evolutionary time.

  7. Soil, water, and nutrient losses from management alternatives for degraded pasture in Brazilian Atlantic Rainforest biome.

    Science.gov (United States)

    Rocha Junior, Paulo Roberto da; Andrade, Felipe Vaz; Mendonça, Eduardo de Sá; Donagemma, Guilherme Kangussú; Fernandes, Raphael Bragança Alves; Bhattharai, Rabin; Kalita, Prasanta Kumar

    2017-04-01

    The objective of this study was to evaluate sediment, water and nutrient losses from different pasture managements in the Atlantic Rainforest biome. A field study was carried out in Alegre Espiríto Santo, Brazil, on a Xanthic Ferralsol cultivated with braquiaria (Brachiaria brizantha). The six pasture managements studied were: control (CON), chisel (CHI), fertilizer (FER), burned (BUR), plowing and harrowing (PH), and integrated crop-livestock (iCL). Runoff and sediment samples were collected and analyzed for calcium (Ca), magnesium (Mg), potassium (K), phosphorus (P) and organic carbon contents. Soil physical attributes and above and below biomass were also evaluated. The results indicated that higher water loss was observed for iCL (129.90mm) and CON (123.25mm) managements, and the sediment losses were higher for CON (10.24tha -1 ) and BUR (5.20tha -1 ) managements when compared to the other managements. Majority of the nutrients losses occurred in dissolved fraction (99% of Ca, 99% of Mg, 96% of K, and 65% of P), whereas a significant fraction of organic carbon (80%) loss occurred in a particulate form. Except for P, other nutrients (Ca, Mg and K) and organic carbon losses were higher in coarse sediment compared to fine sediment. The greater losses of sediment, organic carbon, and nutrients were observed for CON followed by BUR management (plosses from various practices, to reduce pasture degradation, farmers should adopt edaphic practices by applying lime and fertilize to improve pasture growth and soil cover, and reducing soil erosion in the hilly Brazilian Atlantic Rainforest biome. Copyright © 2016. Published by Elsevier B.V.

  8. The role of plant functional trade-offs for biodiversity changes and biome shifts under scenarios of global climatic change

    Directory of Open Access Journals (Sweden)

    B. Reu

    2011-05-01

    Full Text Available The global geographic distribution of biodiversity and biomes is determined by species-specific physiological tolerances to climatic constraints. Current vegetation models employ empirical bioclimatic relationships to predict present-day vegetation patterns and to forecast biodiversity changes and biome shifts under climatic change. In this paper, we consider trade-offs in plant functioning and their responses under climatic changes to forecast and explain changes in plant functional richness and shifts in biome geographic distributions.

    The Jena Diversity model (JeDi simulates plant survival according to essential plant functional trade-offs, including ecophysiological processes such as water uptake, photosynthesis, allocation, reproduction and phenology. We use JeDi to quantify changes in plant functional richness and biome shifts between present-day and a range of possible future climates from two SRES emission scenarios (A2 and B1 and seven global climate models using metrics of plant functional richness and functional identity.

    Our results show (i a significant loss of plant functional richness in the tropics, (ii an increase in plant functional richness at mid and high latitudes, and (iii a pole-ward shift of biomes. While these results are consistent with the findings of empirical approaches, we are able to explain them in terms of the plant functional trade-offs involved in the allocation, metabolic and reproduction strategies of plants. We conclude that general aspects of plant physiological tolerances can be derived from functional trade-offs, which may provide a useful process- and trait-based alternative to bioclimatic relationships. Such a mechanistic approach may be particularly relevant when addressing vegetation responses to climatic changes that encounter novel combinations of climate parameters that do not exist under contemporary climate.

  9. Clinical trial methodology

    National Research Council Canada - National Science Library

    Peace, Karl E; Chen, Ding-Geng

    2011-01-01

    ... in the pharmaceutical industry, Clinical trial methodology emphasizes the importance of statistical thinking in clinical research and presents the methodology as a key component of clinical research...

  10. Syagrus schizophylla: Unconventional Food Plant of the Caatinga Biome with a high caloric value | Syagrus schizophylla: Planta alimentícia não convencional do bioma de caatinga com alto valor calórico

    Directory of Open Access Journals (Sweden)

    Maria do Rosário Fátima Padilha

    2017-06-01

    Full Text Available In the present day world concern relates to the effects of climate on plantations. In various parts of the world, forests, fields, plantations continue to disappear or are degraded. Brazil is a country that concentrates a great diversity of plants, this also refers to the Caatinga biome that participates in the vegetal cover of the state of Pernambuco, where this vegetation still displays the presence of unconventional food plants (UFP. Seeking to know in more detail the nutritional value of fruits of the palm Syagrus schizophylla known as Catolé coconut, this study sought to assess the centesimal composition of its almonds. Physico-chemical tests were performed in triplicate and according to methodologies of Instituto Adolfo Lutz-IAL. Before the results, it is concluded that the Catolé coconut almond is very nutritious and presents high caloric value.

  11. Vida saudável versus vida aprimorada: tecnologias biomédicas, processos de subjetivação e aprimoramento

    Directory of Open Access Journals (Sweden)

    Fabíola Rohden

    Full Text Available Resumo Fenômenos contemporâneos como um crescimento significativo dos campos da medicina sexual e da medicina estética exigem novas investigações empíricas e também aprofundamento de determinados debates teóricos. No contexto das últimas décadas, ganham relevo formas de subjetivação centradas no investimento pessoal via transformações corporais, nas quais o consumo de artefatos biomédicos considerados inovadores torna-se central. Em função da produção de questões advindas desse campo, este artigo discute criticamente alguns vetores conceituais. Categorias analíticas como biomedicalização, farmacologização, modos de subjetivação e aprimoramento são centrais para dar conta de entender os processos em questão. Na mesma direção, é preciso considerar a importância de problematizar as fronteiras entre os investimentos associados à manutenção da saúde e aqueles motivados pelo aprimoramento de si.

  12. Methodology and technology for peripheral and central blood pressure and blood pressure variability measurement: current status and future directions - Position statement of the European Society of Hypertension Working Group on blood pressure monitoring and cardiovascular variability.

    Science.gov (United States)

    Stergiou, George S; Parati, Gianfranco; Vlachopoulos, Charalambos; Achimastos, Apostolos; Andreadis, Emanouel; Asmar, Roland; Avolio, Alberto; Benetos, Athanase; Bilo, Grzegorz; Boubouchairopoulou, Nadia; Boutouyrie, Pierre; Castiglioni, Paolo; de la Sierra, Alejandro; Dolan, Eamon; Head, Geoffrey; Imai, Yutaka; Kario, Kazuomi; Kollias, Anastasios; Kotsis, Vasilis; Manios, Efstathios; McManus, Richard; Mengden, Thomas; Mihailidou, Anastasia; Myers, Martin; Niiranen, Teemu; Ochoa, Juan Eugenio; Ohkubo, Takayoshi; Omboni, Stefano; Padfield, Paul; Palatini, Paolo; Papaioannou, Theodore; Protogerou, Athanasios; Redon, Josep; Verdecchia, Paolo; Wang, Jiguang; Zanchetti, Alberto; Mancia, Giuseppe; O'Brien, Eoin

    2016-09-01

    Office blood pressure measurement has been the basis for hypertension evaluation for almost a century. However, the evaluation of blood pressure out of the office using ambulatory or self-home monitoring is now strongly recommended for the accurate diagnosis in many, if not all, cases with suspected hypertension. Moreover, there is evidence that the variability of blood pressure might offer prognostic information that is independent of the average blood pressure level. Recently, advancement in technology has provided noninvasive evaluation of central (aortic) blood pressure, which might have attributes that are additive to the conventional brachial blood pressure measurement. This position statement, developed by international experts, deals with key research and practical issues in regard to peripheral blood pressure measurement (office, home, and ambulatory), blood pressure variability, and central blood pressure measurement. The objective is to present current achievements, identify gaps in knowledge and issues concerning clinical application, and present relevant research questions and directions to investigators and manufacturers for future research and development (primary goal).

  13. Sensibility and time heterogeneity of Biome-BGC model parameters%Biome-BGC模型参数的敏感性和时间异质性

    Institute of Scientific and Technical Information of China (English)

    刘秋雨; 张廷龙; 孙睿; 王博闻; 叶欣欣; 李一哲

    2017-01-01

    生态过程模型为研究陆表生态系统水、碳、氮等物质的循环提供了一种有效的手段.模型与数据同化结合可建立模拟与观测之间的桥梁,同时提高模型与观测两种方法揭示地表真实状况的有效性.但模型参数的特性,将直接影响到模型模拟及数据同化的精度.传统观念认为,生态过程模型参数在相同植被类型条件下是固定不变的,但近期研究已开始关注其时空异质性.本文以Biome-BGC模型为例,利用美国哈佛森林Environmental Monitoring Site (EMS)通量观测站的相关数据,对哈佛森林地区水、碳通量进行模拟.首先对模型参数进行敏感性分析;然后应用模拟退火算法,构造目标函数,使待优化的敏感参数在合理阈值范围内不断变动反复迭代,获取逐月的最优参数值;通过引入变异系数,对敏感参数的时间异质性进行分析.结果表明:生态过程模型参数最优值并非常量,而会随时间表现出异质性,而且各参数时间异质性大小差异显著.文中对Biome-BGC模型的敏感参数按时间异质性大小划分了相应的等级.研究结果有助于加深对生态过程模型参数特性的认识,为参数的合理取值及动态优化提供思路与依据,有助于进一步提高模型模拟和数据同化的精度与效率.%Ecological process model provides an effective way for studying water,carbon and nitrogen cycles of terrestrial ecosystem.The combination of the model and data assimilation could build a link between observation and simulation,which improves the effectiveness of model and observation methods to reveal the real state of land surface,but the accuracy of simulation and assimilation is directly affected by model parameters.Parameters are constants in traditional opinion;however,some current studies have focused on the time-space heterogeneity of parameters.In this paper,we used Harvard Forest Environmental Monitoring Site (EMS) data to simulate

  14. Modeling the grazing effect on dry grassland carbon cycling with modified Biome-BGC grazing model

    Science.gov (United States)

    Luo, Geping; Han, Qifei; Li, Chaofan; Yang, Liao

    2014-05-01

    Identifying the factors that determine the carbon source/sink strength of ecosystems is important for reducing uncertainty in the global carbon cycle. Arid grassland ecosystems are a widely distributed biome type in Xinjiang, Northwest China, covering approximately one-fourth the country's land surface. These grasslands are the habitat for many endemic and rare plant and animal species and are also used as pastoral land for livestock. Using the modified Biome-BGC grazing model, we modeled carbon dynamics in Xinjiang for grasslands that varied in grazing intensity. In general, this regional simulation estimated that the grassland ecosystems in Xinjiang acted as a net carbon source, with a value of 0.38 Pg C over the period 1979-2007. There were significant effects of grazing on carbon dynamics. An over-compensatory effect in net primary productivity (NPP) and vegetation carbon (C) stock was observed when grazing intensity was lower than 0.40 head/ha. Grazing resulted in a net carbon source of 23.45 g C m-2 yr-1, which equaled 0.37 Pg in Xinjiang in the last 29 years. In general, grazing decreased vegetation C stock, while an increasing trend was observed with low grazing intensity. The soil C increased significantly (17%) with long-term grazing, while the soil C stock exhibited a steady trend without grazing. These findings have implications for grassland ecosystem management as it relates to carbon sequestration and climate change mitigation, e.g., removal of grazing should be considered in strategies that aim to increase terrestrial carbon sequestrations at local and regional scales. One of the greatest limitations in quantifying the effects of herbivores on carbon cycling is identifying the grazing systems and intensities within a given region. We hope our study emphasizes the need for large-scale assessments of how grazing impacts carbon cycling. Most terrestrial ecosystems in Xinjiang have been affected by disturbances to a greater or lesser extent in the past

  15. Future projections of fire danger in Brazilian biomes in the 21st century

    Science.gov (United States)

    Libonati, Renata; Silva, Patrícia; DaCamara, Carlos; Bastos, Ana

    2016-04-01

    In the global context, Brazil is one of the regions more severely affected by fire occurrences, with important consequences in the global CO2 balance, the state of the Amazon forest and the ecological diversity of the region. Brazil is also one of the few regions experiencing a raise in annual mean temperature above 2.5o during the 20th century, which may further increase between 2o and 7o until 2100 and, likely, be accompanied by a decrease in precipitation [1]. As the fire occurrence and severity largely depends on these two variables, it is worth assessing the evolution of fire danger for the coming decades. In order to obtain a detailed characterization of the future fire patterns in the different biomes of Brazil, we use outputs from a regional-downscaling of the EC-Earth climate model at 0.44 degrees spatial resolution for two future scenarios, an intermediate (RCP4.5) and a more severe (RCP8.5) one. We use a fire danger index specifically developed for the Brazilian climate and biome characteristics, the IFR from INPE. This index relies on values of maximum temperature, accumulated precipitation over different periods, minimum relative humidity and vegetation cover to estimate the likelihood of fire occurrence. We find a systematic increase of the days with critical fire risk, which is more pronounced in RCP8.5 and mostly affects months when fire activity takes place. Temperature increase is the most determinant factor for the increase in fire danger in the dry regions of savannah and shrubland, a result to be expected as fuel is already very dry. [1] Collins, M., R. Knutti, J. Arblaster, J.-L. Dufresne, T. Fichefet, P. Friedlingstein, X. Gao, W.J. Gutowski, T. Johns, G. Krinner, M. Shongwe, C. Tebaldi, A.J. Weaver and M. Wehner, 2013: Long-term Climate Change: Projections, Commitments and Irreversibility. In: Climate Change 2013: The Physical Science Basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on

  16. Structure of Drosophilidae Assemblage (Insecta, Diptera in Pampa Biome (São Luiz Gonzaga, RS

    Directory of Open Access Journals (Sweden)

    Jean Lucas Poppe

    2012-01-01

    Full Text Available The Brazilian Pampa (the southernmost end of the country is currently a highly modified environment because of increasing agricultural activities. In many places, only small parts of grasslands remain inside an agricultural landscape. Drosophilidae (Diptera have been widely used as a potential bioindicators to monitor the effects of anthropogenic changes in natural environments. However, the fauna of Drosophilidae in the Pampa Biome from natural and disturbed environments, still remains largely unknown. The present study represents one of the first attempts to fill this gap, showing results from monthly collections in the municipality of São Luiz Gonzaga (28º24'28"S, 54º57'39"W, in the Brazilian Pampa. A species inventory was carried out in two contrasting environments, an urban zone and a forest remnant (rural zone. In both areas banana-baited traps were used to capture adult drosophilids. The identification was made using external morphology and male terminalia. In total, 13,379 drosophilids were analyzed (rural zone: N = 8,812 and Sobs = 25; urban zone: N = 4,567 and Sobs = 16. In the present study, 16 (60% out of 26 species were found exclusively or preferentially in the forest. The period of highest richness was between the months of June to November (roughly winter and spring, and the period of lowest richness was from December to May (roughly summer and autumn. An analysis of cluster by the Coefficient of Jaccard showed that species composition slightly changes when the period of the year with higher temperatures (from January to May is compared with the period with lower temperatures (from June to October. The species abundances were also highly affected by seasonality, as revealed by the Morisita Index, since the samples clustered into similar groups in consecutive periods and in the same season, showing the seasonal preference of some species. The time component was a determinant in the diversity of the assemblage, surpassing the

  17. Plant litter dynamics in the forest-stream interface: precipitation is a major control across tropical biomes

    OpenAIRE

    Tonin, Alan M.; Gon?alves, Jos? F.; Bambi, Paulino; Couceiro, Sheyla R. M.; Feitoza, Lorrane A. M.; Fontana, Lucas E.; Hamada, Neusa; Hepp, Luiz U.; Lezan-Kowalczuk, V?nia G.; Leite, Gustavo F. M.; Lemes-Silva, Aurea L.; Lisboa, Leonardo K.; Loureiro, Rafael C.; Martins, Renato T.; Medeiros, Adriana O.

    2017-01-01

    Riparian plant litter is a major energy source for forested streams across the world and its decomposition has repercussions on nutrient cycling, food webs and ecosystem functioning. However, we know little about plant litter dynamics in tropical streams, even?though the tropics occupy 40% of the Earth?s land surface. Here we investigated spatial and temporal (along a year cycle) patterns of litter inputs and storage in multiple streams of three tropical biomes in Brazil (Atlantic forest, Ama...

  18. [Parameter sensitivity of simulating net primary productivity of Larix olgensis forest based on BIOME-BGC model].

    Science.gov (United States)

    He, Li-hong; Wang, Hai-yan; Lei, Xiang-dong

    2016-02-01

    Model based on vegetation ecophysiological process contains many parameters, and reasonable parameter values will greatly improve simulation ability. Sensitivity analysis, as an important method to screen out the sensitive parameters, can comprehensively analyze how model parameters affect the simulation results. In this paper, we conducted parameter sensitivity analysis of BIOME-BGC model with a case study of simulating net primary productivity (NPP) of Larix olgensis forest in Wangqing, Jilin Province. First, with the contrastive analysis between field measurement data and the simulation results, we tested the BIOME-BGC model' s capability of simulating the NPP of L. olgensis forest. Then, Morris and EFAST sensitivity methods were used to screen the sensitive parameters that had strong influence on NPP. On this basis, we also quantitatively estimated the sensitivity of the screened parameters, and calculated the global, the first-order and the second-order sensitivity indices. The results showed that the BIOME-BGC model could well simulate the NPP of L. olgensis forest in the sample plot. The Morris sensitivity method provided a reliable parameter sensitivity analysis result under the condition of a relatively small sample size. The EFAST sensitivity method could quantitatively measure the impact of simulation result of a single parameter as well as the interaction between the parameters in BIOME-BGC model. The influential sensitive parameters for L. olgensis forest NPP were new stem carbon to new leaf carbon allocation and leaf carbon to nitrogen ratio, the effect of their interaction was significantly greater than the other parameter' teraction effect.

  19. Comment on Chiesi et al. (2011): “Use of BIOME-BGC to simulate Mediterranean forest carbon stocks”

    OpenAIRE

    Eastaugh CS

    2011-01-01

    The mechanistic forest growth model BIOME-BGC utilizes a “spin-up” procedure to estimate site parameters for forests in a steady-state condition, as they may have been expected to be prior to anthropogenic influence. Forests in this condition have no net growth, as living biomass accumulation is balanced by mortality. To simulate current ecosystems it is necessary to reset the model to reflect a forest of the correct development stage. The alternative approach of simply post-adjus...

  20. Soil Loss Vulnerability in an Agricultural Catchment in the Atlantic Forest Biome in Southern Brazil

    Directory of Open Access Journals (Sweden)

    Rafael Gotardo

    2016-11-01

    Full Text Available This study estimates soil loss vulnerability using field samples and spatial data in a 30 km² area in the Atlantic forest biome in southern Brazil. The anthropogenic part of the landscape consists mainly of small agricultural properties. Soil loss vulnerability was calculated using adaptations of the universal soil loss equation. The results were compared to sediment data collected during field surveys. Spatial analysis was performed using a geographical information system (GIS and fine resolution data (1 m. Both field and spatial analyses produced similar results, 5.390 tons of soil loss per year using field data and 5.691 tons per year using GIS. Using soil loss and sediment data related to the Concordia River, we estimate that of all the exported sediment 25% of the lost soil reaches the river. These data are an effective source of information for municipal administrators of the region, which consists of small agricultural catchments (dominated by small properties that comprise the regional economy. A thematic map was used to determine sub-drainage priority as information for public managers.

  1. A mesic maximum in biological water use demarcates biome sensitivity to aridity shifts.

    Science.gov (United States)

    Good, Stephen P; Moore, Georgianne W; Miralles, Diego G

    2017-12-01

    Biome function is largely governed by how efficiently available resources can be used and yet for water, the ratio of direct biological resource use (transpiration, E T ) to total supply (annual precipitation, P) at ecosystem scales remains poorly characterized. Here, we synthesize field, remote sensing and ecohydrological modelling estimates to show that the biological water use fraction (E T /P) reaches a maximum under mesic conditions; that is, when evaporative demand (potential evapotranspiration, E P ) slightly exceeds supplied precipitation. We estimate that this mesic maximum in E T /P occurs at an aridity index (defined as E P /P) between 1.3 and 1.9. The observed global average aridity of 1.8 falls within this range, suggesting that the biosphere is, on average, configured to transpire the largest possible fraction of global precipitation for the current climate. A unimodal E T /P distribution indicates that both dry regions subjected to increasing aridity and humid regions subjected to decreasing aridity will suffer declines in the fraction of precipitation that plants transpire for growth and metabolism. Given the uncertainties in the prediction of future biogeography, this framework provides a clear and concise determination of ecosystems' sensitivity to climatic shifts, as well as expected patterns in the amount of precipitation that ecosystems can effectively use.

  2. Plants of the fynbos biome harbour host species-specific bacterial communities.

    Science.gov (United States)

    Miyambo, Tsakani; Makhalanyane, Thulani P; Cowan, Don A; Valverde, Angel

    2016-08-01

    The fynbos biome in South Africa is globally recognised as a plant biodiversity hotspot. However, very little is known about the bacterial communities associated with fynbos plants, despite interactions between primary producers and bacteria having an impact on the physiology of both partners and shaping ecosystem diversity. This study reports on the structure, phylogenetic composition and potential roles of the endophytic bacterial communities located in the stems of three fynbos plants (Erepsia anceps, Phaenocoma prolifera and Leucadendron laureolum). Using Illumina MiSeq 16S rRNA sequencing we found that different subpopulations of Deinococcus-Thermus, Alphaproteobacteria, Acidobacteria and Firmicutes dominated the endophytic bacterial communities. Alphaproteobacteria and Actinobacteria were prevalent in P. prolifera, whereas Deinococcus-Thermus dominated in L. laureolum, revealing species-specific host-bacteria associations. Although a high degree of variability in the endophytic bacterial communities within hosts was observed, we also detected a core microbiome across the stems of the three plant species, which accounted for 72% of the sequences. Altogether, it seems that both deterministic and stochastic processes shaped microbial communities. Endophytic bacterial communities harboured putative plant growth-promoting bacteria, thus having the potential to influence host health and growth. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  3. Soil-borne bacterial structure and diversity does not reflect community activity in Pampa biome.

    Science.gov (United States)

    Lupatini, Manoeli; Suleiman, Afnan Khalil Ahmad; Jacques, Rodrigo Josemar Seminoti; Antoniolli, Zaida Inês; Kuramae, Eiko Eurya; de Oliveira Camargo, Flávio Anastácio; Roesch, Luiz Fernando Würdig

    2013-01-01

    The Pampa biome is considered one of the main hotspots of the world's biodiversity and it is estimated that half of its original vegetation was removed and converted to agricultural land and tree plantations. Although an increasing amount of knowledge is being assembled regarding the response of soil bacterial communities to land use change, to the associated plant community and to soil properties, our understanding about how these interactions affect the microbial community from the Brazilian Pampa is still poor and incomplete. In this study, we hypothesized that the same soil type from the same geographic region but under distinct land use present dissimilar soil bacterial communities. To test this hypothesis, we assessed the soil bacterial communities from four land-uses within the same soil type by 454-pyrosequencing of 16S rRNA gene and by soil microbial activity analyzes. We found that the same soil type under different land uses harbor similar (but not equal) bacterial communities and the differences were controlled by many microbial taxa. No differences regarding diversity and richness between natural areas and areas under anthropogenic disturbance were detected. However, the measures of microbial activity did not converge with the 16S rRNA data supporting the idea that the coupling between functioning and composition of bacterial communities is not necessarily correlated.

  4. Local climatic conditions constrain soil yeast diversity patterns in Mediterranean forests, woodlands and scrub biome.

    Science.gov (United States)

    Yurkov, Andrey M; Röhl, Oliver; Pontes, Ana; Carvalho, Cláudia; Maldonado, Cristina; Sampaio, José Paulo

    2016-02-01

    Soil yeasts represent a poorly known fraction of the soil microbiome due to limited ecological surveys. Here, we provide the first comprehensive inventory of cultivable soil yeasts in a Mediterranean ecosystem, which is the leading biodiversity hotspot for vascular plants and vertebrates in Europe. We isolated and identified soil yeasts from forested sites of Serra da Arrábida Natural Park (Portugal), representing the Mediterranean forests, woodlands and scrub biome. Both cultivation experiments and the subsequent species richness estimations suggest the highest species richness values reported to date, resulting in a total of 57 and 80 yeast taxa, respectively. These values far exceed those reported for other forest soils in Europe. Furthermore, we assessed the response of yeast diversity to microclimatic environmental factors in biotopes composed of the same plant species but showing a gradual change from humid broadleaf forests to dry maquis. We observed that forest properties constrained by precipitation level had strong impact on yeast diversity and on community structure and lower precipitation resulted in an increased number of rare species and decreased evenness values. In conclusion, the structure of soil yeast communities mirrors the environmental factors that affect aboveground phytocenoses, aboveground biomass and plant projective cover. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  5. A multi-biome gap in understanding of crop and ecosystem responses to elevated CO2.

    Science.gov (United States)

    Leakey, Andrew D B; Bishop, Kristen A; Ainsworth, Elizabeth A

    2012-06-01

    A key finding from elevated [CO(2)] field experiments is that the impact of elevated [CO(2)] on plant and ecosystem function is highly dependent upon other environmental conditions, namely temperature and the availability of nutrients and soil moisture. In addition, there is significant variation in the response to elevated [CO(2)] among plant functional types, species and crop varieties. However, experimental data on plant and ecosystem responses to elevated [CO(2)] are strongly biased to economically and ecologically important systems in the temperate zone. There is a multi-biome gap in experimental data that is most severe in the tropics and subtropics, but also includes high latitudes. Physiological understanding of the environmental conditions and species found at high and low latitudes suggest they may respond differently to elevated [CO(2)] than well-studied temperate systems. Addressing this knowledge gap should be a high priority as it is vital to understanding 21st century food supply and ecosystem feedbacks on climate change. Published by Elsevier Ltd.

  6. Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study.

    Science.gov (United States)

    Crowther, Thomas W; Maynard, Daniel S; Leff, Jonathan W; Oldfield, Emily E; McCulley, Rebecca L; Fierer, Noah; Bradford, Mark A

    2014-09-01

    The consequences of deforestation for aboveground biodiversity have been a scientific and political concern for decades. In contrast, despite being a dominant component of biodiversity that is essential to the functioning of ecosystems, the responses of belowground biodiversity to forest removal have received less attention. Single-site studies suggest that soil microbes can be highly responsive to forest removal, but responses are highly variable, with negligible effects in some regions. Using high throughput sequencing, we characterize the effects of deforestation on microbial communities across multiple biomes and explore what determines the vulnerability of microbial communities to this vegetative change. We reveal consistent directional trends in the microbial community response, yet the magnitude of this vegetation effect varied between sites, and was explained strongly by soil texture. In sandy sites, the difference in vegetation type caused shifts in a suite of edaphic characteristics, driving substantial differences in microbial community composition. In contrast, fine-textured soil buffered microbes against these effects and there were minimal differences between communities in forest and grassland soil. These microbial community changes were associated with distinct changes in the microbial catabolic profile, placing community changes in an ecosystem functioning context. The universal nature of these patterns allows us to predict where deforestation will have the strongest effects on soil biodiversity, and how these effects could be mitigated. © 2014 John Wiley & Sons Ltd.

  7. SOIL ORGANIC MATTER FRACTIONS IN PRESERVED AND DISTURBED WETLANDS OF THE CERRADO BIOME

    Directory of Open Access Journals (Sweden)

    Ricardo Fernandes de Sousa

    2015-02-01

    Full Text Available Veredas are humid tropical ecosystems, generally associated to hydromorphic soils and a shallow water table. The soils of these ecosystems are affected by the use of the areas around these veredas. The objective of this study was to determine soil organic matter (SOM fractions in veredas adjacent to preserved (native savanna and disturbed environments (agricultural areas and pastures in the Cerrado biome. Soil samples were collected from the 0-10 and 10-20 cm layers along reference lines drawn along the relief following the upper, middle and lower positions of one of the slopes, in the direction of the draining line of the vereda. The soil analysis determined: total soil OC, total nitrogen and C:N ratio; C and N contents and C:N ratio in particulate and mineral-associated fractions (of SOM; fulvic acids, humic acids and humin fractions and ratio between humic and fulvic acids. The agricultural use around the veredas induced changes in the SOM fractions, more pronounced in the lower part of the slope. In the soil surface of this part, the OC levels in the humic substances and the particulate fraction of SOM, as well as total soil OC were reduced in the vereda next to crop fields.

  8. Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database.

    Science.gov (United States)

    Bissett, Andrew; Fitzgerald, Anna; Meintjes, Thys; Mele, Pauline M; Reith, Frank; Dennis, Paul G; Breed, Martin F; Brown, Belinda; Brown, Mark V; Brugger, Joel; Byrne, Margaret; Caddy-Retalic, Stefan; Carmody, Bernie; Coates, David J; Correa, Carolina; Ferrari, Belinda C; Gupta, Vadakattu V S R; Hamonts, Kelly; Haslem, Asha; Hugenholtz, Philip; Karan, Mirko; Koval, Jason; Lowe, Andrew J; Macdonald, Stuart; McGrath, Leanne; Martin, David; Morgan, Matt; North, Kristin I; Paungfoo-Lonhienne, Chanyarat; Pendall, Elise; Phillips, Lori; Pirzl, Rebecca; Powell, Jeff R; Ragan, Mark A; Schmidt, Susanne; Seymour, Nicole; Snape, Ian; Stephen, John R; Stevens, Matthew; Tinning, Matt; Williams, Kristen; Yeoh, Yun Kit; Zammit, Carla M; Young, Andrew

    2016-01-01

    Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The 'Biomes of Australian Soil Environments' (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function. BASE currently provides amplicon sequences and associated contextual data for over 900 sites encompassing all Australian states and territories, a wide variety of bioregions, vegetation and land-use types. Amplicons target bacteria, archaea and general and fungal-specific eukaryotes. The growing database will soon include metagenomics data. Data are provided in both raw sequence (FASTQ) and analysed OTU table formats and are accessed via the project's data portal, which provides a user-friendly search tool to quickly identify samples of interest. Processed data can be visually interrogated and intersected with other Australian diversity and environmental data using tools developed by the 'Atlas of Living Australia'. Developed within an open data framework, the BASE project is the first Australian soil microbial diversity database. The database will grow and link to other global efforts to explore microbial, plant, animal, and marine biodiversity. Its design and open access nature ensures that BASE will evolve as a valuable tool for documenting an often overlooked component of biodiversity and the many microbe-driven processes that are essential to sustain soil function and ecosystem services.

  9. PERMANENCE OF WATER EFFECTIVENESS IN THE ROOT ZONE OF THE CAATINGA BIOME

    Directory of Open Access Journals (Sweden)

    CARLOS ALEXANDRE GOMES COSTA

    2016-01-01

    Full Text Available Soil is an important water compartment into a watershed scale, mainly due to its role in providing water to plants and to the influence of antecedent moisture on the runoff initiation. The aim of this research is to assess the permanence of water effectiveness in the soil under preserved-vegetation constraints in the Caatinga biome, in the semiarid northeastern Brazil. For this purpose, hourly soil moisture measurements were collected with TDR and analyzed between 2003 and 2010 for three soil-vegetation associations in the Aiuaba Experimental Basin. The results showed that in nine months per year soil moisture was below wilting point for two associations, whose soils are Chromic Luvisol and Haplic Lixisol (Abruptic. In the third association, where the shallow soil Lithic Leptosol prevails, water was found non-effective four months per year. A possible reason for the high water permanence in the shallowest soil is the percolation process, generating sub-surface flow, which barely occurs in the deeper soils. In situ observations indicates that the long period of soil moisture below the wilting point was not enough to avoid the blooming season of the Caatinga vegetation during the rainy periods. Indeed, after the beginning of each rainy season, there is a growth of dense green vegetation, regardless of the long period under water shortage.

  10. Diversity of herbaceous plants and bacterial communities regulates soil resistome across forest biomes.

    Science.gov (United States)

    Hu, Hang-Wei; Wang, Jun-Tao; Singh, Brajesh K; Liu, Yu-Rong; Chen, Yong-Liang; Zhang, Yu-Jing; He, Ji-Zheng

    2018-04-24

    Antibiotic resistance is ancient and prevalent in natural ecosystems and evolved long before the utilization of synthetic antibiotics started, but factors influencing the large-scale distribution patterns of natural antibiotic resistance genes (ARGs) remain largely unknown. Here, a large-scale investigation over 4000 km was performed to profile soil ARGs, plant communities and bacterial communities from 300 quadrats across five forest biomes with minimal human impact. We detected diverse and abundant ARGs in forests, including over 160 genes conferring resistance to eight major categories of antibiotics. The diversity of ARGs was strongly and positively correlated with the diversity of bacteria, herbaceous plants and mobile genetic elements (MGEs). The ARG composition was strongly correlated with the taxonomic structure of bacteria and herbs. Consistent with this strong correlation, structural equation modelling demonstrated that the positive effects of bacterial and herb communities on ARG patterns were maintained even when simultaneously accounting for multiple drivers (climate, spatial predictors and edaphic factors). These findings suggest a paradigm that the interactions between aboveground and belowground communities shape the large-scale distribution of soil resistomes, providing new knowledge for tackling the emerging environmental antibiotic resistance. © 2018 Society for Applied Microbiology and John Wiley & Sons Ltd.

  11. Microbial quality of soil from the Pampa biome in response to different grazing pressures

    Directory of Open Access Journals (Sweden)

    Rafael S. Vargas

    2015-06-01

    Full Text Available The aim of this study was to evaluate the impact of different grazing pressures on the activity and diversity of soil bacteria. We performed a long-term experiment in Eldorado do Sul, southern Brazil, that assessed three levels of grazing pressure: high pressure (HP, with 4% herbage allowance (HA, moderate pressure (MP, with 12% HA, and low pressure (LP, with 16% HA. Two reference areas were also assessed, one of never-grazed native vegetation (NG and another of regenerated vegetation after two years of grazing (RG. Soil samples were evaluated for microbial biomass and enzymatic (β-glucosidase, arylsulfatase and urease activities. The structure of the bacterial community and the population of diazotrophic bacteria were evaluated by RFLP of the 16S rRNA and nifH genes, respectively. The diversity of diazotrophic bacteria was assessed by partial sequencing of the 16S rDNA gene. The presence of grazing animals increased soil microbial biomass in MP and HP. The structures of the bacterial community and the populations of diazotrophic bacteria were altered by the different grazing managements, with a greater diversity of diazotrophic bacteria in the LP treatment. Based on the characteristics evaluated, the MP treatment was the most appropriate for animal production and conservation of the Pampa biome.

  12. Termite assemblages in five semideciduous Atlantic Forest fragments in the northern coastland limit of the biome

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    Heitor Bruno de Araújo Souza

    2012-03-01

    Full Text Available Termites are abundant organisms in tropical ecosystems and strongly influence the litter decomposition and soil formation. Despite their importance, few studies about their assemblage structures have been made in Brazilian Atlantic Forest fragments, especially in the area located north of the São Francisco River. This study aims to analyze the assemblage composition of five Atlantic Forest fragments located in the northern biome limit along the Brazilian coast. A standardized sampling protocol of termites was applied in each fragment. Thirty-three termite species belonging to twenty genera and three families were found in the forest fragments. The wood-feeder group was dominant both concerning to species richness and number of encounters in all areas. In sites northern to 7°S, there is an evident simplification of the termite assemblage composition regarding species richness and number of encounters by feeding group. This fact is apparently due to a higher sandy level in soils and to semideciduous character of the vegetation in the northern fragments. Thus, even on the north of São Francisco River, termite biodiversity is heterogeneously spread with highest density of species in the portion between 07°S and São Francisco River mouth (10°29'S.

  13. Ornamental Eudicotyledons from grasslands of Pampa biome in Rio Grande do Sul

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    Ana De Araújo Carrion

    2012-10-01

    Full Text Available The present study aims at investigating the group of Eudicotyledons native plants with ornamental potential of grasslands from the Pampa biome in the south of Brazil. The Pampa presents a high level of biodiversity; however, it requires studies related to the richness of vascular plants and its biological and ecological knowledge. The purpose of this work is to elaborate a preliminary inventory of this group of plants, analyzing the ornamental potential of each specie and indicating those that could be considered as being priorities for the purpose of sustainable use with this objective. Some grassland species were selected through the search for information in herbarium registers, national and international works about decorative plants, floristic surveys, besides the authors´ practical knowledge. Some parameters and values were associated, aiming at reducing the subjectivity of the choice. The survey resulted in a list of 177 species distributed in 36 families and 101 genera. Among these species, ten presented high ornamental potential. These data show that the richness of the grassland native ornamental flora is high, even though its use is poorly known. The use of these plants, if in a sustainable manner, can produce economic and ecological benefits.

  14. Soil respiration at mean annual temperature predicts annual total across vegetation types and biomes

    Directory of Open Access Journals (Sweden)

    M. Bahn

    2010-07-01

    Full Text Available Soil respiration (SR constitutes the largest flux of CO2 from terrestrial ecosystems to the atmosphere. However, there still exist considerable uncertainties as to its actual magnitude, as well as its spatial and interannual variability. Based on a reanalysis and synthesis of 80 site-years for 57 forests, plantations, savannas, shrublands and grasslands from boreal to tropical climates we present evidence that total annual SR is closely related to SR at mean annual soil temperature (SRMAT, irrespective of the type of ecosystem and biome. This is theoretically expected for non water-limited ecosystems within most of the globally occurring range of annual temperature variability and sensitivity (Q10. We further show that for seasonally dry sites where annual precipitation (P is lower than potential evapotranspiration (PET, annual SR can be predicted from wet season SRMAT corrected for a factor related to P/PET. Our finding indicates that it can be sufficient to measure SRMAT for obtaining a well constrained estimate of its annual total. This should substantially increase our capacity for assessing the spatial distribution of soil CO2 emissions across ecosystems, landscapes and regions, and thereby contribute to improving the spatial resolution of a major component of the global carbon cycle.

  15. Methane Production and Transport within the Marsh Biome of Biosphere 2

    Science.gov (United States)

    Molnar, Jennifer; Goodridge, Kelven

    1997-01-01

    In recent decades, the concentration of methane in the earth's atmosphere increased 1-2% annually. It's rate of increases, combined with methane's effectiveness as a greenhouse gas, has led to an intensive research effort to determine the sources and sinks of the gas in the environment. Biosphere 2 offers a unique opportunity to contribute to the effort because it lacks a major photochemical sink present in the Earth's atmosphere. Researchers can therefore concentrate on biological processes involved in methane cycles. Wetlands are a large source of atmospheric methane, due to anoxic conditions in the sediments and the abundance of organic materials. In order to determine if these conditions in Biosphere 2 also promote methane production, this study looked for the fluxes of methane and methods of transport of the gas from from the water and sediments to the atmosphere in the Marsh Biome. Fluxes of methane from the sediments and waters were measured using static chambers, peepers, and leaf bags. Fluxes and vertical profiles of methane in the sediments show that substantial amounts of methane are being produced in the marsh and are being transported into the Biosphere 2 environment.

  16. Beyond aridification: multiple explanations for the elevated diversification of cacti in the New World Succulent Biome.

    Science.gov (United States)

    Hernández-Hernández, Tania; Brown, Joseph W; Schlumpberger, Boris O; Eguiarte, Luis E; Magallón, Susana

    2014-06-01

    Succulent plants are widely distributed, reaching their highest diversity in arid and semi-arid regions. Their origin and diversification is thought to be associated with a global expansion of aridity. We test this hypothesis by investigating the tempo and pattern of Cactaceae diversification. Our results contribute to the understanding of the evolution of New World Succulent Biomes. We use the most taxonomically complete dataset currently available for Cactaceae. We estimate divergence times and utilize Bayesian and maximum likelihood methods that account for nonrandom taxonomic sampling, possible extinction scenarios and phylogenetic uncertainty to analyze diversification rates, and evolution of growth form and pollination syndrome. Cactaceae originated shortly after the Eocene-Oligocene global drop in CO2 , and radiation of its richest genera coincided with the expansion of aridity in North America during the late Miocene. A significant correlation between growth form and pollination syndrome was found, as well as a clear state dependence between diversification rate, and pollination and growth-form evolution. This study suggests a complex picture underlying the diversification of Cactaceae. It not only responded to the availability of new niches resulting from aridification, but also to the correlated evolution of novel growth forms and reproductive strategies. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

  17. Effect of postharvest practices including degreening on citrus carpoplane microbial biomes.

    Science.gov (United States)

    Gomba, A; Chidamba, L; Korsten, L

    2017-04-01

    To investigate the effect of commercial citrus packhouse processing steps on the fruit surface microbiome of Clementines and Palmer navel oranges. Viable bacteria, yeast and fungi counts, and the pyrosequencing analysis of the 16S rRNA and ITS were used to evaluate the community structure and population dynamics of phylloepiphytic bacteria and fungi associated with commercial postharvest processing. Drenching significantly reduced microbial counts in all cases except for yeasts on navels, while the extent of degreening effects varied between the citrus varieties. Pyrosequencing analysis showed a total of 4409 bacteria and 5792 fungi nonchimeric unique sequences with an average of 1102 bacteria and 1448 fungi reads per sample. Dominant phyla on the citrus carpoplane were Proteobacteria (53·5%), Actinobacteria (19·9%), Bacteroidetes (5·6%) and Deinococcus-Thermus (5·4%) for bacteria and Ascomycota (80·5%) and Basidiomycota (9·8%) for fungi. Beginning with freshly harvested fruit fungal diversity declined significantly after drenching, but had little effect on bacteria and populations recovered during degreening treatments, including those for Penicillium sp. Packhouse processing greatly influences microbial communities on the citrus carpoplane. A broad orange biome was described with pyrosequencing and gave insight into the likely survival and persistence of pathogens, especially as they may affect the quality and safety of the packed product. A close examination of the microbiota of fruit and the impact of intervention strategies on the ecological balance may provide a more durable approach to reduce losses and spoilage. © 2017 The Society for Applied Microbiology.

  18. Antimicrobial potential of actinobacteria isolated from the rhizosphere of the Caatinga biome plant Caesalpinia pyramidalis Tul.

    Science.gov (United States)

    Silva-Lacerda, G R; Santana, R C F; Vicalvi-Costa, M C V; Solidônio, E G; Sena, K X F R; Lima, G M S; Araújo, J M

    2016-03-04

    Actinobacteria are known to produce various secondary metabolites having antibiotic effects. This study assessed the antimicrobial potential of actinobacteria isolated from the rhizosphere of Caesalpinia pyramidalis Tul. from the Caatinga biome. Sixty-eight actinobacteria isolates were evaluated for antimicrobial activity against different microorganisms by disk diffusion and submerged fermentation, using different culture media, followed by determination of minimum inhibitory concentration (MIC) and chemical prospecting of the crude extract. Of the isolates studied, 52.9% of those isolated at 37°C and 47.05% of those isolated at 45°C had activity against Bacillus subtilis, Staphylococcus aureus, methicillin-resistant S. aureus (MRSA), Fusarium moniliforme, and Candida albicans. When compared with others actinobacteria, the isolate C1.129 stood out with better activity and was identified by 16S rDNA gene analysis as Streptomyces parvulus. The crude ethanol extract showed an MIC of 0.97 μg/mL for MRSA and B. subtilis, while the ethyl acetate extract showed MIC of 3.9 μg/mL for S. aureus and MRSA, showing the greatest potential among the metabolites produced. Chemical prospecting revealed the presence of mono/sesquiterpenes, proanthocyanidin, triterpenes, and steroids in both crude extracts. This study evaluates S. parvulus activity against multi-resistant microorganisms such as MRSA. Thus, it proves that low-fertility soil, as is found in the Caatinga, may contain important microorganisms for the development of new antimicrobial drugs.

  19. Vegetation of the Hantam-Tanqua-Roggeveld subregion, South Africa Part 2: Succulent Karoo Biome related vegetation

    Directory of Open Access Journals (Sweden)

    Helga van der Merwe

    2009-03-01

    Full Text Available The Hantam-Tanqua-Roggeveld subregion lies within the Succulent Karoo Hotspot that stretches along the western side of the Republic of South Africa and Namibia. This project, carried out to document the botanical diversity in the Hantam-Tanqua-Roggeveld subregion, was part of a project identified as a priority during the SKEP (Succulent Karoo Ecosystem Programme initiative in this Hotspot. Botanical surveys were conducted in an area covering over three million hectares. Satellite images of the area and topocadastral, land type and geology maps were used to stratify the area into relatively homogeneous units. An analysis of the floristic data of 390 sample plots identified two major floristic units, i.e. the Fynbos Biome related vegetation and the Succulent Karoo Biome related vegetation. A description of the vegetation related to the Succulent Karoo Biome is presented in this article. Seven associations, 16 subassociations and several mosaic vegetation units, consisting of more than one vegetation unit, were identified and mapped. Various threats to the vegetation in the region were identified during the survey and are briefly discussed.

  20. Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa.

    Science.gov (United States)

    Corbelli, Julian Martin; Zurita, Gustavo Andres; Filloy, Julieta; Galvis, Juan Pablo; Vespa, Natalia Isabel; Bellocq, Isabel

    2015-01-01

    The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD), functional (FBD) and phylogenetic (PBD) facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools) and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants) from two contrasting biomes (subtropical forest and grassland) and land uses (tree plantations and cropfields) in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland), and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation.

  1. Variation in decomposition rates in the fynbos biome, South Africa: the role of plant species and plant stoichiometry.

    Science.gov (United States)

    Bengtsson, Jan; Janion, Charlene; Chown, Steven L; Leinaas, Hans Petter

    2011-01-01

    Previous studies in the fynbos biome of the Western Cape, South Africa, have suggested that biological decomposition rates in the fynbos vegetation type, on poor soils, may be so low that fire is the main factor contributing to litter breakdown and nutrient release. However, the fynbos biome also comprises vegetation types on more fertile soils, such as the renosterveld. The latter is defined by the shrub Elytropappus rhinocerotis, while the shrub Galenia africana may become dominant in overgrazed areas. We examined decomposition of litter of these two species and the geophyte Watsonia borbonica in patches of renosterveld in an agricultural landscape. In particular, we sought to understand how plant species identity affects litter decomposition rates, especially through variation in litter stoichiometry. Decomposition (organic matter mass loss) varied greatly among the species, and was related to litter N and P content. G. africana, with highest nutrient content, lost 65% of its original mass after 180 days, while E. rhinocerotis had lost ca. 30%, and the very nutrient poor W. borbonica biome. Thus, biological decomposition has likely been underestimated and, along with small-scale variation in ecosystem processes, would repay further study.

  2. Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa

    Science.gov (United States)

    Corbelli, Julian Martin; Zurita, Gustavo Andres; Filloy, Julieta; Galvis, Juan Pablo; Vespa, Natalia Isabel; Bellocq, Isabel

    2015-01-01

    The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD), functional (FBD) and phylogenetic (PBD) facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools) and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants) from two contrasting biomes (subtropical forest and grassland) and land uses (tree plantations and cropfields) in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland), and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation. PMID:25978319

  3. Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa.

    Directory of Open Access Journals (Sweden)

    Julian Martin Corbelli

    Full Text Available The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD, functional (FBD and phylogenetic (PBD facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants from two contrasting biomes (subtropical forest and grassland and land uses (tree plantations and cropfields in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland, and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation.

  4. Modeling the Ecosystem Services Provided by Trees in Urban Ecosystems: Using Biome-BGC to Improve i-Tree Eco

    Science.gov (United States)

    Brown, Molly E.; McGroddy, Megan; Spence, Caitlin; Flake, Leah; Sarfraz, Amna; Nowak, David J.; Milesi, Cristina

    2012-01-01

    As the world becomes increasingly urban, the need to quantify the effect of trees in urban environments on energy usage, air pollution, local climate and nutrient run-off has increased. By identifying, quantifying and valuing the ecological activity that provides services in urban areas, stronger policies and improved quality of life for urban residents can be obtained. Here we focus on two radically different models that can be used to characterize urban forests. The i-Tree Eco model (formerly UFORE model) quantifies ecosystem services (e.g., air pollution removal, carbon storage) and values derived from urban trees based on field measurements of trees and local ancillary data sets. Biome-BGC (Biome BioGeoChemistry) is used to simulate the fluxes and storage of carbon, water, and nitrogen in natural environments. This paper compares i-Tree Eco's methods to those of Biome-BGC, which estimates the fluxes and storage of energy, carbon, water and nitrogen for vegetation and soil components of the ecosystem. We describe the two models and their differences in the way they calculate similar properties, with a focus on carbon and nitrogen. Finally, we discuss the implications of further integration of these two communities for land managers such as those in Maryland.

  5. Modeling distribution of Schinus molle L. in the Brazilian Pampa: insights on vegetation dynamics and conservation of the biome

    Directory of Open Access Journals (Sweden)

    R.P.M. Lemos

    2014-12-01

    Full Text Available Natural establishment of forests in the Brazilian Pampa biome should occur due to soil, hydrology and climate conditions, although no significant forest expansion over grassland has been noticed, precluded mainly by human interference and lack of environmental management. In this study, we used niche-modeling distribution of the tree species Schinus molle L. based on climatic variables to access the vegetation dynamics of the Brazilian Pampa and to develop strategies that assure the conservation of this biome, concerning both grassland and forest formations. Here we show that a large area of the Brazilian Pampa is suitable for expansion of S. molle populations, supporting the forest expansion over grassland as a natural process in this biome. We propose that the current absence of tree species expansion over the grassland in these areas is a result of the resilience of the grassland and of human interferences through expansion of agriculture, ranching and forestry with exotic species. Therefore, conservationist actions should focus on establishing preservation unities that include forest populations and grassland, while environmental management should be applied just in farming areas with historical human interference. Such actions will respect the ecological dynamics of the Pampa and value the forest formations in this grassland-dominated environment.

  6. Mo(ve)ment-methodology

    DEFF Research Database (Denmark)

    Mørck, Line Lerche; Christian Celosse-Andersen, Martin

    2018-01-01

    This paper describes the theoretical basis for and development of a moment-movement research methodology, based on an integration of critical psychological practice research and critical ethnographic social practice theory. Central theoretical conceptualizations, such as human agency, life...... conditions and identity formation, are discussed in relation to criminological theories of gang desistance. The paper illustrates how the mo(ve)ment methodology was applied in a study of comprehensive processes of identity (re)formation and gang exit processes. This study was conducted with Martin, a former....... This is a moment which captures Martin’s complex and ambiguous feelings of conflictual concerns, frustration, anger, and a new feeling of insecurity in his masculinity, as well as engagement and a sense of deep meaningfulness as he becomes a more reflective academic. All these conflicting feelings also give...

  7. Design methodology of Dutch banknotes

    Science.gov (United States)

    de Heij, Hans A. M.

    2000-04-01

    Since the introduction of a design methodology for Dutch banknotes, the quality of Dutch paper currency has improved in more than one way. The methodology is question provides for (i) a design policy, which helps fix clear objectives; (ii) design management, to ensure a smooth cooperation between the graphic designer, printer, papermaker an central bank, (iii) a program of requirements, a banknote development guideline for all parties involved. This systematic approach enables an objective selection of design proposals, including security features. Furthermore, the project manager obtains regular feedback from the public by conducting market surveys. Each new design of a Netherlands Guilder banknote issued by the Nederlandsche Bank of the past 50 years has been an improvement on its predecessor in terms of value recognition, security and durability.

  8. Identification of novel mammalian hosts and Brazilian biome geographic distribution of Trypanosoma cruzi TcIII and TcIV.

    Science.gov (United States)

    Barros, Juliana Helena S; Xavier, Samanta Cristina C; Bilac, Daniele; Lima, Valdirene Santos; Dario, Maria Augusta; Jansen, Ana Maria

    2017-08-01

    Trypanosoma cruzi is a parasitic protozoan responsible for Chagas disease. Seven different Discrete Typing Units (DTUs) of T. cruzi are currently identified in nature: TcI-TcVI, and TcBat whose distribution patterns in nature, hosts/reservoirs and eco-epidemiological importance are still little known. Here, we present novel data on the geographic distribution and diversity of mammalian hosts and vectors of T. cruzi DTUs TcIII and TcIV. In this study, we analyzed 61 T. cruzi isolates obtained from 18 species of mammals (five orders) and two Hemiptera genera. Samples were collected from five Brazilian biomes (Pantanal, Caatinga, Cerrado, Atlantic Rainforest, and Amazon) previously characterized as Z3 or mixed infection (TcI-Z3) by mini-exon gene PCR. To identify TcIII and TcIV genotypes, we applied restriction fragment length polymorphism analysis to the PCR-amplified histone 3 gene. DTUs TcIII and TcIV were identified in single and mixed infections from wide dispersion throughout five Brazilian biomes studied, with TcIV being the most common. Pantanal was the biome that displayed the largest number of samples characterized as TcIII and TcIV in single and mixed infections, followed by Atlantic Rainforest and Amazon. Species from the Didelphimorphia order displayed the highest frequency of infection and were found in all five biomes. We report, for the first time, the infection of a species of the Artiodactyla order by DTU TcIII. In addition, we describe new host species: five mammals (marsupials and rodents) and two genera of Hemiptera. Our data indicate that DTUs TcIII and TcIV are more widespread and infect a larger number of mammalian species than previously thought. In addition, they are transmitted in restricted foci and cycles, but in different microhabitats and areas with distinct ecological profiles. Finally, we show that DTUs TcIII and TcIV do not present any specific association with biomes or host species. Copyright © 2017. Published by Elsevier B.V.

  9. Synergistic impacts of deforestation, climate change and fire on the future biomes distribution in Amazonia

    Science.gov (United States)

    Sampaio, G.; Cardoso, M. F.; Nobre, C. A.; Salazar, L. F.

    2013-05-01

    Several studies indicate future increase of environmental risks for the ecosystems in the Amazon region as a result of climate and land-use change, and their synergistic interactions. Modeling studies (e.g. Oyama and Nobre 2004, Salazar et al. 2007, Malhi et al. 2008) project rapid and irreversible replacement of forests by savannas with large-scale losses of biodiversity and livelihoods for people in the region. This process is referred to as the Amazon Dieback, where accelerated plant mortality due to environmental changes lead to forest collapse and savannas expansion after "tipping points" in climate and land surface changes are achieved. In this study we performed new analyses to quantify how deforestation, climate change and fire may combine to affect the distribution of major biomes in Amazonia. Changes in land use consider deforestation scenarios of 0%, 20%, 40%, and 50% (Sampaio et al., 2007), with and without fires (Cardoso et al., 2008), under the two greenhouse gases scenarios B1 and A2 and three "representative concentration pathways" (RCPs): 2.6, 4.5 and 8.5, for years 2015-2034 and 2040-2059 ("2025" and "2050" time-slices), from IPCC AR4 and CMIP5. The results show that the area affected in scenarios A2 and RCP 8.5 is larger than in the climate scenario B1 and RCP 2.6, and in both cases the effect is progressively higher in time. Most important changes occur in the East and South of the Amazon, with replacement of tropical forest by seasonal forest and savanna. The effect of fire in this region is important in all scenarios. The Northwest Amazon presents the smallest changes in the area of tropical forest, indicating that even for substantial land-use modifications and global climate change, the resulting atmospheric conditions would still support tropical forest in the region. In summary, we conclude that the synergistic combination of deforestation, climate change resulting from global warming, and the potential for higher fire occurrence may lead

  10. Adsorption-desorption reactions of selenium (VI) in tropical cultivated and uncultivated soils under Cerrado biome.

    Science.gov (United States)

    Lessa, J H L; Araujo, A M; Silva, G N T; Guilherme, L R G; Lopes, G

    2016-12-01

    Soil management may affect selenium (Se) adsorption capacity. This study investigated adsorption and desorption of Se (VI) in selected Brazilian soils from the Cerrado biome, an area of ever increasing importance for agriculture expansion in Brazil. Soil samples were collected from cultivated and uncultivated soils, comprising clayed and sandy soils. Following chemical and mineralogical characterization, soil samples were subjected to Se adsorption and desorption tests. Adsorption was evaluated after a 72-h reaction with increasing concentrations of Se (0-2000 μg L -1 ) added as Na 2 SeO 4 in a NaCl electrolyte solution (pH 5.5; ionic strength 15 mmol L -1 ). Desorption, as well as distribution coefficients (K d ) for selenate were also assessed. Soil management affected Se adsorption capacity, i.e., Se adsorbed amounts were higher for uncultivated soils, when compared to cultivated ones. Such results were also supported by data of K d and maximum adsorption capacity of Se. This fact was attributed mainly to the presence of greater amounts of competing anions, especially phosphate, in cultivated soils, due to fertilizer application. Phosphate may compete with selenate for adsorption sites, decreasing Se retention. For the same group of soils (cultivated and uncultivated), Se adsorption was greater in the clayed soils compared to sandy ones. Our results support the idea that adding Se (VI) to the soil is a good strategy to increase Se levels in food crops (agronomic biofortification), especially when crops are grown in soils that have been cultivated over the time due to their low Se adsorption capacity (high Se availability). Copyright © 2016 Elsevier Ltd. All rights reserved.

  11. Mosquito community composition in dynamic landscapes from the Atlantic Forest biome (Diptera, Culicidae

    Directory of Open Access Journals (Sweden)

    Mário Luís Pessôa Guedes

    2014-03-01

    Full Text Available Mosquito community composition in dynamic landscapes from the Atlantic Forest biome (Diptera, Culicidae. Considering that some species of Culicidae are vectors of pathogens, both the knowledge of the diversity of the mosquito fauna and how some environment factors influence in it, are important subjects. In order to address the composition of Culicidae species in a forest reserve in southern Atlantic Forest, we compared biotic and abiotic environmental determinants and how they were associated with the occurrence of species between sunset and sunrise. The level of conservation of the area was also considered. The investigation was carried out at Reserva Natural do Morro da Mina, in Antonina, state of Paraná, Brazil. We performed sixteen mosquito collections employing Shannon traps at three-hour intervals, from July 2008 to June 2009. The characterization of the area was determined using ecological indices of diversity, evenness, dominance and similarity. We compared the frequency of specimens with abiotic variables, i.e., temperature, relative humidity and pluviosity. Seven thousand four hundred ten mosquito females were captured. They belong to 48 species of 12 genera. The most abundant genera were Anopheles, Culex, Coquillettidia, Aedes and Runchomyia. Among the species, the most abundant was Anopheles cruzii, the primary vector of Plasmodium spp. in the Atlantic Forest. Results of the analyses showed that the abiotic variables we tested did not influence the occurrence of species, although certain values suggested that there was an optimum range for the occurrence of culicid species. It was possible to detect the presence of species of Culicidae with different epidemiologic profiles and habitat preference.

  12. Global pressures, specific responses: effects of nutrient enrichment in streams from different biomes

    International Nuclear Information System (INIS)

    Artigas, Joan; García-Berthou, Emili; Gómez, Nora; Romaní, Anna M; Sabater, Sergi; Bauer, Delia E; Cochero, Joaquín; Cortelezzi, Agustina; Rodrigues-Capítulo, Alberto; Castro, Maria I; Donato, John C; Colautti, Darío C; Elosegi, Arturo; Feijoó, Claudia; Giorgi, Adonis; Leggieri, Leonardo; Muñoz, Isabel

    2013-01-01

    We assessed the effects of nutrient enrichment on three stream ecosystems running through distinct biomes (Mediterranean, Pampean and Andean). We increased the concentrations of N and P in the stream water 1.6–4-fold following a before–after control–impact paired series (BACIPS) design in each stream, and evaluated changes in the biomass of bacteria, primary producers, invertebrates and fish in the enriched (E) versus control (C) reaches after nutrient addition through a predictive-BACIPS approach. The treatment produced variable biomass responses (2–77% of explained variance) among biological communities and streams. The greatest biomass response was observed for algae in the Andean stream (77% of the variance), although fish also showed important biomass responses (about 9–48%). The strongest biomass response to enrichment (77% in all biological compartments) was found in the Andean stream. The magnitude and seasonality of biomass responses to enrichment were highly site specific, often depending on the basal nutrient concentration and on windows of ecological opportunity (periods when environmental constraints other than nutrients do not limit biomass growth). The Pampean stream, with high basal nutrient concentrations, showed a weak response to enrichment (except for invertebrates), whereas the greater responses of Andean stream communities were presumably favored by wider windows of ecological opportunity in comparison to those from the Mediterranean stream. Despite variation among sites, enrichment globally stimulated the algal-based food webs (algae and invertebrate grazers) but not the detritus-based food webs (bacteria and invertebrate shredders). This study shows that nutrient enrichment tends to globally enhance the biomass of stream biological assemblages, but that its magnitude and extent within the food web are complex and are strongly determined by environmental factors and ecosystem structure. (letter)

  13. Implications of a lightning-rich tundra biome for permafrost carbon and vegetation dynamics

    Science.gov (United States)

    Chen, Y.; Veraverbeke, S.; Randerson, J. T.

    2017-12-01

    Lightning is a major ignition source of wildfires in circumpolar boreal forests but rarely occurs in arctic tundra. While theoretical and empirical work suggests that climate change will increase lightning strikes in temperate regions, much less is known about future changes in lightning across terrestrial ecosystems at high northern latitudes. Here we analyzed the spatial and temporal patterns of lightning flash rate (FR) from the satellite observations and surface detection networks. Regression models between the observed FR from the Optical Transient Detector on the MicroLab-1 satellite (later renamed OV-1) and meteorological parameters, including surface temperature (T), convective available potential energy (CAPE), and convective precipitation (CP) from ECMWF (European Centre for Medium-Range Weather Forecasts) ERA-interim reanalysis, were established and assessed. We found that FR had significant linear correlations with CAPE and CP, and a strong non-linear relationship with T. The statistical model based on T and CP can reproduce most of the spatial and temporal variability in FR in the circumpolar region. By using the regression model and meteorological predictions from 24 earth system models in the Coupled Model Intercomparison Project Phase 5 (CMIP5), we estimated the spatial distribution of FR by the end of the 21st century. Due to increases in surface temperature and convection, modeled FR shows substantial increase in northern biomes, including a 338% change in arctic tundra and a 185% change in regions with permafrost soil carbon reservoirs. These changes highlight a new mechanism by which permafrost carbon is vulnerable to the sustained impacts of climate warming. Increased fire in a warmer and lightning-rich future near the treeline has the potential to accelerate the northward migration of trees, which may further enhance warming and the abundance of lightning strikes.

  14. Regional Atmospheric CO2 Inversion Reveals Seasonal and Geographic Differences in Amazon Net Biome Exchange

    Science.gov (United States)

    Alden, Caroline B.; Miller, John B.; Gatti, Luciana V.; Gloor, Manuel M.; Guan, Kaiyu; Michalak, Anna M.; van der Laan-Luijkx, Ingrid; Touma, Danielle; Andrews, Arlyn; Basso, Luana G.; hide

    2016-01-01

    Understanding tropical rainforest carbon exchange and its response to heat and drought is critical for quantifying the effects of climate change on tropical ecosystems, including global climate carbon feedbacks. Of particular importance for the global carbon budget is net biome exchange of CO2 with the atmosphere (NBE), which represents nonfire carbon fluxes into and out of biomass and soils. Subannual and sub-Basin Amazon NBE estimates have relied heavily on process-based biosphere models, despite lack of model agreement with plot-scale observations. We present a new analysis of airborne measurements that reveals monthly, regional-scale (Approx.1-8 x 10(exp -6) km2) NBE variations. We develop a regional atmospheric CO2 inversion that provides the first analysis of geographic and temporal variability in Amazon biosphere-atmosphere carbon exchange and that is minimally influenced by biosphere model-based first guesses of seasonal and annual mean fluxes. We find little evidence for a clear seasonal cycle in Amazon NBE but do find NBE sensitivity to aberrations from long-term mean climate. In particular, we observe increased NBE (more carbon emitted to the atmosphere) associated with heat and drought in 2010, and correlations between wet season NBE and precipitation (negative correlation) and temperature (positive correlation). In the eastern Amazon, pulses of increased NBE persisted through 2011, suggesting legacy effects of 2010 heat and drought. We also identify regional differences in postdrought NBE that appear related to long-term water availability. We examine satellite proxies and find evidence for higher gross primary productivity (GPP) during a pulse of increased carbon uptake in 2011, and lower GPP during a period of increased NBE in the 2010 dry season drought, but links between GPP and NBE changes are not conclusive. These results provide novel evidence of NBE sensitivity to short-term temperature and moisture extremes in the Amazon, where monthly and sub

  15. Requisitos uniformes para preparar los manuscritos enviados a revistas biomédicas

    Directory of Open Access Journals (Sweden)

    1998-01-01

    Full Text Available En 1978, un reducido grupo de directores de revistas médicas generales que se publican en inglés se reunió de manera informal en Vancouver (Canadá a fin de fijar normas con respecto al formato que deberían adoptar los manuscritos enviados a esas publicaciones. Este fue el inicio de lo que con el tiempo llegó a conocerse como el Grupo de Vancouver. Sus requisitos para la preparación de manuscritos, que incluían el formato de las referencias bibliográficas creado por la Biblioteca Nacional de Medicina de los Estados Unidos, se publicaron por vez primera en 1979. Con el paso del tiempo el Grupo de Vancouver creció y se convirtió en el Comité Internacional de Directores de Revistas Médicas (CIDRM, que se reúne una vez al año y que gradualmente ha venido ampliando los temas que le conciernen. El Comité ha producido cinco ediciones de los requisitos uniformes para preparar los manuscritos enviados a revistas biomédicas. A lo largo de los años han surgido asuntos que van más allá de la preparación del manuscrito. Algunos de esos asuntos se han incorporado a los requisitos uniformes, mientras que otros se tratan en declaraciones por separado. Cada declaración se ha publicado en una revista científica.

  16. Net Biome Productivity of different land use at the sites of the Tharandt cluster

    Science.gov (United States)

    Grünwald, T.; Prescher, A.-K.; Bernhofer, Ch.

    2009-04-01

    Within the Tharandt cluster there are 5 flux monitoring sites including 3 CARBOEUROPE main sites. The CARBOEUROPE sites cover typical land use of the region (spruce [monitored since 1996], grassland [since 2003], cropland [since 2004]). For all sites estimates of the Net Biome Productivity (NBP) and its uncertainty have been derived using Net Ecosystem Productivity (NEP) based on the EC measurements and C exports and imports on an annual basis. The crop site is a small C sink (NEP of 30-110gCm-2a-1) only. The annual NEP values are dependent on the cultivated crop species (winter or summer crop). Including C export (harvest) and C import (manure spreading) lead to a considerable C source of 270-540gCm-2a-1. Organic fertilisation (C import) has a strong impact on NBP values expressed in a reduced annual net carbon source. Also, the largest interannual differences of NBP values are found at this site - mainly induced by the existence and the amount of a carbon import due to organic fertilisation. Management practices affect the NBP in a sensitive way at this crop site. Each crop shows a higher C export due to harvest than the annual NEP. To validate the calculated C equivalent using harvested grain biomass modelled NPP values are available. Uncertainty ranges of C export, C import and NBP as well as the grassland and spruce NBP (for comparison) are also stated. In general, land use and management strongly affect the annual NBP of non-forested ecosystems especially. So, this is the second main driver of the C budget besides the interannual variability in meteorological conditions and water availability with its influence on NEP, GPP and TER.

  17. Ecosystem-scale carbon monoxide exchange and partitioning across major biomes in Europe

    Science.gov (United States)

    Hammerle, Albin; Spielmann, Felix; Kitz, Florian; Ibrom, Andreas; Migliavacca, Mirco; Noe, Steffen; Kolle, Olaf; Moreno, Gerardo; Wohlfahrt, Georg

    2017-04-01

    With an average mole fraction of 100 ppb carbon monoxide (CO) plays a critical role in atmospheric chemistry and has an indirect global warming potential. While sources/sinks of CO on land at least partially cancel out each other and their magnitude is very likely lower compared to other sinks and sources, the magnitude of CO sources and sinks is highly uncertain. Thus it may be premature to neglect any direct contributions of land ecosystems to the CO budget. In addition, changes in global climate and resulting changes in global productivity may require re-evaluating older data and assumptions. One major reason for the large uncertainty is a general scarcity of empirical data. Here we present data on continuous eddy covariance measurements of CO-fluxes above different biomes in Europe in combination with soil-chamber flux measurements. Eddy covariance and soil-chamber measurements were conducted during the vegetation periods in 2015 and 2016 at a temperate grassland (AUT), a Mediterranean savanna (ESP), a temperate mixed deciduous (DEN) and a hemi-boreal forest (EST). While a clear diel pattern in ecosystem-scale CO-fluxes could be observed at the two grassland sites, with comparatively high emission rates at daytime conditions and fluxes around zero at night, no such pattern could be found for the two forest sites. Soil-chamber measurements mimicked the ecosystem-scale fluxes with CO-emissions during the day at the grassland ecosystems and slightly negative fluxes at night. Applying different treatments the influence of radiation and the availability of litter on these fluxes could be shown. Furthermore, a two-month rainout experiment revealed hardly any differences in CO soil fluxes between rainout- and control-plots at the grassland site (AUT), unless extremely dry conditions were reached.

  18. Assessing MODIS GPP in Non-Forested Biomes in Water Limited Areas Using EC Tower Data

    Directory of Open Access Journals (Sweden)

    Flor Álvarez-Taboada

    2015-03-01

    Full Text Available Although shrublands, savannas and grasslands account for 37% of the world’s terrestrial area, not many studies have analysed the role of these ecosystems in the global carbon cycle at a regional scale. The MODIS Gross Primary Production (GPP product is used here to help bridge this gap. In this study, the agreement between the MODIS GPP product (GPPm and the GPP Eddy Covariance tower data (GPPec was tested for six different sites in temperate and dry climatic regions (three grasslands, two shrublands and one evergreen forest. Results of this study show that for the non-forest sites in water-limited areas, GPPm is well correlated with GPPec at annual scales (r2 = 0.77, n = 12; SEE = 149.26 g C∙m−2∙year−1, although it tends to overestimate GPP and it is less accurate in the sites with permanent water restrictions. The use of biome-specific models based on precipitation measurements at a finer spatial resolution than the Data Assimilation Office (DAO values can increase the accuracy of these estimations. The seasonal dynamics and the beginning and end of the growing season were well captured by GPPm for the sites where (i the productivity was low throughout the year or (ii the changes in the flux trend were abrupt, usually due to the restrictions in water availability. The agreement between GPPec and GPPm in non-forested sites was lower on a weekly basis than at an annual scale (0.44 ≤ r2 ≤ 0.49, but these results were improved by including meteorological data at a finer spatial scale, and soil water content and temperature measurements in the model developed to predict GPPec (0.52 ≤ r2 ≤ 0.65.

  19. Drivers of leaf carbon exchange capacity across biomes at the continental scale.

    Science.gov (United States)

    Smith, Nicholas G; Dukes, Jeffrey S

    2018-04-29

    Realistic representations of plant carbon exchange processes are necessary to reliably simulate biosphere-atmosphere feedbacks. These processes are known to vary over time and space, though the drivers of the underlying rates are still widely debated in the literature. Here, we measured leaf carbon exchange in >500 individuals of 98 species from the neotropics to high boreal biomes to determine the drivers of photosynthetic and dark respiration capacity. Covariate abiotic (long- and short-term climate) and biotic (plant type, plant size, ontogeny, water status) data were used to explore significant drivers of temperature-standardized leaf carbon exchange rates. Using model selection, we found the previous week's temperature and soil moisture at the time of measurement to be a better predictor of photosynthetic capacity than long-term climate, with the combination of high recent temperatures and low soil moisture tending to decrease photosynthetic capacity. Non-trees (annual and perennials) tended to have greater photosynthetic capacity than trees, and, within trees, adults tended to have greater photosynthetic capacity than juveniles, possibly as a result of differences in light availability. Dark respiration capacity was less responsive to the assessed drivers than photosynthetic capacity, with rates best predicted by multi-year average site temperature alone. Our results suggest that, across large spatial scales, photosynthetic capacity quickly adjusts to changing environmental conditions, namely light, temperature, and soil moisture. Respiratory capacity is more conservative and most responsive to longer-term conditions. Our results provide a framework for incorporating these processes into large-scale models and a dataset to benchmark such models. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

  20. FLUXAPYROXAD IN THE ASIAN SOYBEAN RUST CONTROL IN THE CERRADO BIOME

    Directory of Open Access Journals (Sweden)

    RAFAEL MENEZES SILVA DE FREITAS

    2016-01-01

    Full Text Available The etiologic agent of the Asian soybean rust is the Phakopsora pachyrhizi, which causes a reduction in the photosynthetic leaf area and, consequently, in the crop yield. Chemical control is one of the main measures for its management. The objective of this work was to evaluate the efficacy and selectivity of the fluxapyroxad fungicide on controlling the Asian soybean rust, under the edaphoclimatic conditions of the Cerrado biome. The experiment was conducted in an area under no-tillage system, in the Agricultural Research Center, Rio Verde, Goias, Brazil, during the 2012/2013 crop season, using the cultivar NA7337. A randomized block experimental design was used, with twelve treatments and four replications. The treatments consisted of applications of fluxapyroxad (FX, pyraclostrobin (PT, epoxiconazole (EX and metconazole (MZ. The average severity of the disease in the plants reached 37% in the Control. All treatments with fungicides differed from the Control. Treatments 9, 10, 11 and 12 provided the greatest rates of soybean rust control. The treatments 10, 11 and 12 had the highest thousand grain weights, and the yields of the treatments 2, 3 and 11, despite higher than the Control, were lower than the treatments 4, 5, 6, 7, 8, 9, 10 and 12, which had statistically equal yields. The increasing in yield, compared to the Control, ranged from 10.05% (pyraclostrobin, epoxiconazole + pyraclostrobin + mineral oil to 30.55% (pyraclostrobin, pyraclostrobin + fluxapyroxad + mineral oil and pyraclostrobin + metconazole + mineral oil. The highest rates of soybean rust control were presented by fungicides containing fluxapyroxad.

  1. Examining the role of dissolved organic nitrogen in stream ecosystems across biomes and Critical Zone gradients

    Science.gov (United States)

    Wymore, A.; Rodriguez-Cardona, B.; Coble, A. A.; Potter, J.; Lopez Lloreda, C.; Perez Rivera, K.; De Jesus Roman, A.; Bernal, S.; Martí Roca, E.; Kram, P.; Hruska, J.; Prokishkin, A. S.; McDowell, W. H.

    2016-12-01

    Watershed nitrogen exports are often dominated by dissolved organic nitrogen (DON); yet, little is known about the role ambient DON plays in ecosystems. As an organic nutrient, DON may serve as either an energy source or as a nutrient source. One hypothesized control on DON is nitrate (NO3-) availability. Here we examine the interaction of NO3- and DON in streams across temperate forests, tropical rainforests, and Mediterranean and taiga biomes. Experimental streams also drain contrasting Critical Zones which provide gradients of vegetation, soil type and lithology (e.g. volcaniclastic, granitic, ultramafic, Siberian Traps Flood Basalt) in which to explore how the architecture of the Critical Zone affects microbial biogeochemical reactions. Streams ranged in background dissolved organic carbon (DOC) concentration (1-50 mg C/L) and DOC: NO3- ratios (10-2000). We performed a series of ecosystem-scale NO3- additions in multiple streams within each environment and measured the change in DON concentration. Results demonstrate that there is considerable temporal and spatial variation across systems with DON both increasing and decreasing in response to NO3- addition. Ecologically this suggests that DON can serve as both a nutrient source and an energy source to aquatic microbial communities. In contrast, DOC concentrations rarely changed in response to NO3- additions suggesting that the N-rich fraction of the ambient dissolved organic matter pool is more bioreactive than the C-rich fraction. Contrasting responses of the DON and DOC pools indicate different mechanisms controlling their respective cycling. It is likely that DON plays a larger role in ecosystems than previously recognized.

  2. STUDYING FOREST ROOT SYSTEMS - AN OVERVIEW OF METHODOLOGICAL PROBLEMS

    Science.gov (United States)

    The study of tree root systems is central to understanding forest ecosystem carbon and nutrient cycles, nutrient and water uptake, C allocation patterns by trees, soil microbial populations, adaptation of trees to stress, soil organic matter production, etc. Methodological probl...

  3. Scenario development methodologies

    International Nuclear Information System (INIS)

    Eng, T.; Hudson, J.; Stephansson, O.

    1994-11-01

    In the period 1981-1994, SKB has studied several methodologies to systematize and visualize all the features, events and processes (FEPs) that can influence a repository for radioactive waste in the future. All the work performed is based on the terminology and basic findings in the joint SKI/SKB work on scenario development presented in the SKB Technical Report 89-35. The methodologies studied are a) Event tree analysis, b) Influence diagrams and c) Rock Engineering Systems (RES) matrices. Each one of the methodologies is explained in this report as well as examples of applications. One chapter is devoted to a comparison between the two most promising methodologies, namely: Influence diagrams and the RES methodology. In conclusion a combination of parts of the Influence diagram and the RES methodology is likely to be a promising approach. 26 refs

  4. Reliability Centered Maintenance - Methodologies

    Science.gov (United States)

    Kammerer, Catherine C.

    2009-01-01

    Journal article about Reliability Centered Maintenance (RCM) methodologies used by United Space Alliance, LLC (USA) in support of the Space Shuttle Program at Kennedy Space Center. The USA Reliability Centered Maintenance program differs from traditional RCM programs because various methodologies are utilized to take advantage of their respective strengths for each application. Based on operational experience, USA has customized the traditional RCM methodology into a streamlined lean logic path and has implemented the use of statistical tools to drive the process. USA RCM has integrated many of the L6S tools into both RCM methodologies. The tools utilized in the Measure, Analyze, and Improve phases of a Lean Six Sigma project lend themselves to application in the RCM process. All USA RCM methodologies meet the requirements defined in SAE JA 1011, Evaluation Criteria for Reliability-Centered Maintenance (RCM) Processes. The proposed article explores these methodologies.

  5. The Intestinal Eukaryotic and Bacterial Biome of Spotted Hyenas: The Impact of Social Status and Age on Diversity and Composition.

    Science.gov (United States)

    Heitlinger, Emanuel; Ferreira, Susana C M; Thierer, Dagmar; Hofer, Heribert; East, Marion L

    2017-01-01

    In mammals, two factors likely to affect the diversity and composition of intestinal bacteria (bacterial microbiome) and eukaryotes (eukaryome) are social status and age. In species in which social status determines access to resources, socially dominant animals maintain better immune processes and health status than subordinates. As high species diversity is an index of ecosystem health, the intestinal biome of healthier, socially dominant animals should be more diverse than those of subordinates. Gradual colonization of the juvenile intestine after birth predicts lower intestinal biome diversity in juveniles than adults. We tested these predictions on the effect of: (1) age (juvenile/adult) and (2) social status (low/high) on bacterial microbiome and eukaryome diversity and composition in the spotted hyena ( Crocuta crocuta ), a highly social, female-dominated carnivore in which social status determines access to resources. We comprehensively screened feces from 35 individually known adult females and 7 juveniles in the Serengeti ecosystem for bacteria and eukaryotes, using a set of 48 different amplicons (4 for bacterial 16S, 44 for eukaryote 18S) in a multi-amplicon sequencing approach. We compared sequence abundances to classical coprological egg or oocyst counts. For all parasite taxa detected in more than six samples, the number of sequence reads significantly predicted the number of eggs or oocysts counted, underscoring the value of an amplicon sequencing approach for quantitative measurements of parasite load. In line with our predictions, our results revealed a significantly less diverse microbiome in juveniles than adults and a significantly higher diversity of eukaryotes in high-ranking than low-ranking animals. We propose that free-ranging wildlife can provide an intriguing model system to assess the adaptive value of intestinal biome diversity for both bacteria and eukaryotes.

  6. Aplicaciones del SiC biomórfico como reforzante estructural en hormigones refractarios

    Directory of Open Access Journals (Sweden)

    Sepúlveda, R.

    2005-10-01

    Full Text Available This work is devoted to the study of the time and temperature dependence of the static grain growth in YTZP 4 mol %, with an average grain size within the submicrometric range (> 0.1 μm. Also, the mechanical response in the temperature interval between 1200 ºC and 1500 ºC is analysed. The grain growth is controlled by the yttria segregation at the grain boundaries, which plays a key role in the cationic diffusion processes. Microstructural characterization of both as-received and deformed samples allows to conclude that plastic deformation is due to grain boundary sliding (GBS, with stress exponents increasing with the flow stress, but in all cases they are lower than n = 2.

    Una posible aplicación del SiC biomórfico (bioSiC son los reforzante estructural en hormigones refractarios. En este caso se han fabricado piezas de bioSiC con forma de cilindros alargados, 3-4 mm de diámetro y 30-35 mm de longitud, mediante infiltración reactiva de Si líquido en piezas de carbón obtenidas por pirolización de madera de haya de calidad comercial. Hemos estudiado las características microestructurales y las propiedades mecánicas de los reforzantes, como paso previo al estudio de la aplicación mencionada, de la que se ofrece un avance en este trabajo. Para caracterizar la calidad del material y del proceso de fabricación, la microestructura de las piezas se ha estudiado mediante microscopía electrónica de barrido. Los reforzantes de bioSiC fueron ensayados a compresión uniaxial y flexión en cuatro puntos a temperatura ambiente y a alta temperatura (1250-1400ºC para la determinación de sus propiedades mecánicas, y se realizaron estudios fractográficos en el segundo tipo de ensayos. Subsecuentemente, se prepararon ladrillos refractarios con un 3% en peso de reforzantes de bioSiC, que fueron curados a diferentes temperaturas (máx. 1600ºC. Estos ladrillos se han ensayado en compresión y flexión en tres puntos, a temperatura ambiente

  7. A cross-biome synthesis of soil respiration and its determinants under simulated precipitation changes.

    Science.gov (United States)

    Liu, Lingli; Wang, Xin; Lajeunesse, Marc J; Miao, Guofang; Piao, Shilong; Wan, Shiqiang; Wu, Yuxin; Wang, Zhenhua; Yang, Sen; Li, Ping; Deng, Meifeng

    2016-04-01

    Soil respiration (Rs) is the second-largest terrestrial carbon (C) flux. Although Rs has been extensively studied across a broad range of biomes, there is surprisingly little consensus on how the spatiotemporal patterns of Rs will be altered in a warming climate with changing precipitation regimes. Here, we present a global synthesis Rs data from studies that have manipulated precipitation in the field by collating studies from 113 increased precipitation treatments, 91 decreased precipitation treatments, and 14 prolonged drought treatments. Our meta-analysis indicated that when the increased precipitation treatments were normalized to 28% above the ambient level, the soil moisture, Rs, and the temperature sensitivity (Q10) values increased by an average of 17%, 16%, and 6%, respectively, and the soil temperature decreased by -1.3%. The greatest increases in Rs and Q10 were observed in arid areas, and the stimulation rates decreased with increases in climate humidity. When the decreased precipitation treatments were normalized to 28% below the ambient level, the soil moisture and Rs values decreased by an average of -14% and -17%, respectively, and the soil temperature and Q10 values were not altered. The reductions in soil moisture tended to be greater in more humid areas. Prolonged drought without alterations in the amount of precipitation reduced the soil moisture and Rs by -12% and -6%, respectively, but did not alter Q10. Overall, our synthesis suggests that soil moisture and Rs tend to be more sensitive to increased precipitation in more arid areas and more responsive to decreased precipitation in more humid areas. The responses of Rs and Q10 were predominantly driven by precipitation-induced changes in the soil moisture, whereas changes in the soil temperature had limited impacts. Finally, our synthesis of prolonged drought experiments also emphasizes the importance of the timing and frequency of precipitation events on ecosystem C cycles. Given these

  8. Gully erosion in the Caatinga biome, Brazil: measurement and stochastic modelling

    Science.gov (United States)

    Lima Alencar, Pedro Henrique; de Araújo, José Carlos; Nonato Távora Costa, Raimundo

    2017-04-01

    In contrast with inter-rill erosion, which takes a long time to modify the terrain form, gully erosion can fast and severely change the landscape. In the Brazilian semiarid region, a one-million km2 area that coincides with the Caatinga biome, inter-rill erosion prevails due to the silty shallow soils. However, gully erosion does occur in the Caatinga, with temporal increasing severity. This source of sediment impacts the existing dense network of small dams, generating significant deleterious effects, such as water availability reduction in a drought-prone region. This study focuses on the Madalena basin (124 km2, state of Ceará, Brazil), a land-reform settlement with 20 inhabitants per km2, whose main economic activities are agriculture (especially Zea mays), livestock and fishing. In the catchment area, where there are 12 dams (with storage capacity ranging from 6.104 to 2.107 m3), gully erosion has become an issue due to its increasing occurrence. Eight gully-erosion sites have been identified in the basin, but most of them have not yet reached great dimensions (depth and/or width), nor interacted with groundwater, being therefore classified as ephemeral gullies. We selected the three most relevant sites and measured the topography of the eroded channels, as well as the neighboring terrain relief, using accurate total stations and unmanned aerial vehicle. The data was processed with the help of software, such as DataGeosis (Office 7.5) and Surfer (11.0), providing information on gully erosion in terms of (μ ± σ): projection area (317±165 m2), eroded mass (61±36 Mg) and volume (42±25 m3), length (38±6 m), maximum depth (0.58±0.13 m) and maximum width (6.00±2.35 m). The measured data are then compared with those provided by the Foster and Lane model (1986). The model generated results with considerable scatter. This is possibly due to uncertainties in the field parameters, which are neglected in the deterministic approach of most physically-based models

  9. Holocene evolution of lakes in the forest-tundra biome of northern Manitoba, Canada

    Science.gov (United States)

    Hobbs, William O.; Edlund, Mark B.; Umbanhowar, Charles E.; Camill, Philip; Lynch, Jason A.; Geiss, Christoph; Stefanova, Vania

    2017-03-01

    The late-Quaternary paleoenvironmental history of the western Hudson Bay region of Subarctic Canada is poorly constrained. Here, we present a regional overview of the post-glacial history of eight lakes which span the forest-tundra biome in northern Manitoba. We show that during the penultimate drainage phase of Lake Agassiz the lake water had an estimated pH of ∼6.0, with abundant quillwort (Isöetes spp.) along the lakeshore and littoral zone and some floating green algae (Botryococcus spp. and Pediastrum sp.). Based on multiple sediment proxies, modern lake ontogeny in the region commenced at ∼7500 cal yrs BP. Pioneering diatom communities were shaped by the turbid, higher alkalinity lake waters which were influenced by base cation weathering of the surrounding till following Lake Agassiz drainage. By ∼7000 cal yrs BP, soil development and Picea spp. establish and the lakes began a slow trajectory of acidification over the remaining Holocene epoch. The natural acidification of the lakes in this region is slow, on the order of several millennia for one pH unit. Each of the study lakes exhibit relatively stable aquatic communities during the Holocene Thermal Maximum, suggesting this period is a poor analogue for modern climatic changes. During the Neoglacial, the beginning of the post-Little Ice Age period represents the most significant climatic event to impact the lakes of N. Manitoba. In the context of regional lake histories, the rate of diatom floristic change in the last 200-300 years is unprecedented, with the exception of post-glacial lake ontogeny in some of the lakes. For nearly the entire history of the lakes in this region, there is a strong linkage between landscape development and the aquatic ecosystems; however this relationship appears to become decoupled or less strong in the post-LIA period. Significant 20th century changes in the aquatic ecosystem cannot be explained wholly by changes in the terrestrial ecosystem, suggesting that future

  10. Central Chile

    Science.gov (United States)

    2002-01-01

    The beginning of spring in central Chile looked like this to SeaWiFS. The snow-covered Andes mark the country's eastern border, and phytoplankton blooms and river sediment plumes fill the waters off its west coast. A large eddy due west of Concepcion is highlighted by the phytoplankton it contains.

  11. Afrique Centrale

    African Journals Online (AJOL)

    PR BOKO

    (Afrique Centrale) : peuplement de protozoaires ciliés et macro invertébrés ... Le lac d'Obili est un écosystème aquatique situé en plein cœur de Yaoundé en ...... électrique des eaux est assez stable, autour de 200 ; ce qui suppose que la ...

  12. Calibration of a biome-biogeochemical cycles model for modeling the net primary production of teak forests through inverse modeling of remotely sensed data

    Science.gov (United States)

    Imvitthaya, Chomchid; Honda, Kiyoshi; Lertlum, Surat; Tangtham, Nipon

    2011-01-01

    In this paper, we present the results of a net primary production (NPP) modeling of teak (Tectona grandis Lin F.), an important species in tropical deciduous forests. The biome-biogeochemical cycles or Biome-BGC model was calibrated to estimate net NPP through the inverse modeling approach. A genetic algorithm (GA) was linked with Biome-BGC to determine the optimal ecophysiological model parameters. The Biome-BGC was calibrated by adjusting the ecophysiological model parameters to fit the simulated LAI to the satellite LAI (SPOT-Vegetation), and the best fitness confirmed the high accuracy of generated ecophysioligical parameter from GA. The modeled NPP, using optimized parameters from GA as input data, was evaluated using daily NPP derived by the MODIS satellite and the annual field data in northern Thailand. The results showed that NPP obtained using the optimized ecophysiological parameters were more accurate than those obtained using default literature parameterization. This improvement occurred mainly because the model's optimized parameters reduced the bias by reducing systematic underestimation in the model. These Biome-BGC results can be effectively applied in teak forests in tropical areas. The study proposes a more effective method of using GA to determine ecophysiological parameters at the site level and represents a first step toward the analysis of the carbon budget of teak plantations at the regional scale.

  13. Introduction to LCA Methodology

    DEFF Research Database (Denmark)

    Hauschild, Michael Z.

    2018-01-01

    In order to offer the reader an overview of the LCA methodology in the preparation of the more detailed description of its different phases, a brief introduction is given to the methodological framework according to the ISO 14040 standard and the main elements of each of its phases. Emphasis...

  14. Methodologies, languages and tools

    International Nuclear Information System (INIS)

    Amako, Katsuya

    1994-01-01

    This is a summary of the open-quotes Methodologies, Languages and Toolsclose quotes session in the CHEP'94 conference. All the contributions to methodologies and languages are relevant to the object-oriented approach. Other topics presented are related to various software tools in the down-sized computing environment

  15. Archetype modeling methodology.

    Science.gov (United States)

    Moner, David; Maldonado, José Alberto; Robles, Montserrat

    2018-03-01

    Clinical Information Models (CIMs) expressed as archetypes play an essential role in the design and development of current Electronic Health Record (EHR) information structures. Although there exist many experiences about using archetypes in the literature, a comprehensive and formal methodology for archetype modeling does not exist. Having a modeling methodology is essential to develop quality archetypes, in order to guide the development of EHR systems and to allow the semantic interoperability of health data. In this work, an archetype modeling methodology is proposed. This paper describes its phases, the inputs and outputs of each phase, and the involved participants and tools. It also includes the description of the possible strategies to organize the modeling process. The proposed methodology is inspired by existing best practices of CIMs, software and ontology development. The methodology has been applied and evaluated in regional and national EHR projects. The application of the methodology provided useful feedback and improvements, and confirmed its advantages. The conclusion of this work is that having a formal methodology for archetype development facilitates the definition and adoption of interoperable archetypes, improves their quality, and facilitates their reuse among different information systems and EHR projects. Moreover, the proposed methodology can be also a reference for CIMs development using any other formalism. Copyright © 2018 Elsevier Inc. All rights reserved.

  16. Menopause and Methodological Doubt

    Science.gov (United States)

    Spence, Sheila

    2005-01-01

    Menopause and methodological doubt begins by making a tongue-in-cheek comparison between Descartes' methodological doubt and the self-doubt that can arise around menopause. A hermeneutic approach is taken in which Cartesian dualism and its implications for the way women are viewed in society are examined, both through the experiences of women…

  17. VEM: Virtual Enterprise Methodology

    DEFF Research Database (Denmark)

    Tølle, Martin; Vesterager, Johan

    2003-01-01

    This chapter presents a virtual enterprise methodology (VEM) that outlines activities to consider when setting up and managing virtual enterprises (VEs). As a methodology the VEM helps companies to ask the right questions when preparing for and setting up an enterprise network, which works...

  18. Data Centric Development Methodology

    Science.gov (United States)

    Khoury, Fadi E.

    2012-01-01

    Data centric applications, an important effort of software development in large organizations, have been mostly adopting a software methodology, such as a waterfall or Rational Unified Process, as the framework for its development. These methodologies could work on structural, procedural, or object oriented based applications, but fails to capture…

  19. The Methodology of Magpies

    Science.gov (United States)

    Carter, Susan

    2014-01-01

    Arts/Humanities researchers frequently do not explain methodology overtly; instead, they "perform" it through their use of language, textual and historic cross-reference, and theory. Here, methodologies from literary studies are shown to add to Higher Education (HE) an exegetical and critically pluralist approach. This includes…

  20. 改进Biome-BGC模型模拟哈佛森林地区水、碳通量%Simulation of water and carbon fluxes in Harvard forest area by using improved BiomeBGC model.

    Institute of Scientific and Technical Information of China (English)

    张廷龙; 孙睿; 胡波; 冯丽超; 张荣华

    2011-01-01

    Biome-BGC模型通过耦合植被、土壤与大气间的水分与CO2交换过程,实现植被生产力的模拟,但土壤水平衡模块的不够完善,导致在长时间无降水情况下植被生产力模拟存在较大误差.针对这一问题,本文对Biome-BGC模型中土壤水分胁迫气孔导度方程、蒸散计算公式及土壤水分流失过程等3方面进行了改进和调整,利用改进的Biome-BGC模型模拟美国哈佛森林地区蒸散、植被生产力,并与地面通量观测值进行了比较.结果表明,改进后模拟精度有明显的提高,蒸散、植被生态系统生产力(NEE)与观测值间的决定系数分别由0.483和0.658提高到0.617和O.813,蒸散逐年均方根误差平均下降了48.7%,NEE逐年误差平方和平均下降了39.8%.改进后的模型模拟结果更接近观测值.%Using Biome-BGC model can simulate vegetation productivity through the coupling of water and CO2 exchange processes between vegetation, soil and atmosphere, but the soil water balance module is not perfect enough, leading to a large deviation between simulated and observed values under condition of a long time no precipitation. Aiming at this problem, this paper improved and adjusted the equation of stomatal conductance stressed by soil water, the calculation formula of evapotranspiration, and the process of soil water loss in Biome-BGC model. Using this improved model, the evapotranspiration and vegetation productivity in Harvard Forest area were simulated, and compared with field observations. The accuracy of simulated results by the improved model enhanced obviously, with the evapotranspiration R between simulated and observed values increased from 0. 483 to 0. 617, NEE R2 increased from 0. 658 to 0. 813, root mean square error (RMSE) of annual evapotranspiration decreased averagely by 48. 7% , and annual sum squared error ( ASSE) of NEE decreased averagely by 39. 8% , which suggested that the simulated results by using the improved model

  1. Estimation of geological storage capacity of CO{sub 2}: Methodology and implementation to the Duero basin (Central East Area); Estimacion de la Capacidad de Almacenamiento Geologico de CO{sub 2}: Metodologia y Aplicacion a la Cuenca del Duero (Zona Centro-Oriental)

    Energy Technology Data Exchange (ETDEWEB)

    Hurtado, A.; Eguilior, S.

    2008-08-06

    This paper presents the methodology for assessment of the storage capacity into a saline aquifer depth and the results of the studies carried out in the central east area of the Duero Basin. The extension of the study area represents about 40% of the basin. This methodology has been conducted under the need of estimate of uncertainty in everything related to behavior of long-term stored CO{sub 2} in geological formations because one of the major challenges associated with this activity is ensuring the retention of stored CO{sub 2} along the period of the required time. The method is based on the implementation of a Geographic Information System as a tool for capture, storage, management and presentation of data in maps, as well as a tool for analysis and modelling through its link to both geostatistical methods and description of CO{sub 2} thermodynamic behaviour in deep geological storage conditions, by using real gases Equations of States, specially the Sterner-Pitzer Cubic Equation of State. All these analyses are accompanied by the error propagation due to the calculations required for the determination of the volume of rock, the vertical accuracy of the topographic layers, as well as other uncertainties associated with the variables required for the characterization of the CO{sub 2} in the storage conditions. The conclusion is that the deep geologic CO{sub 2} storage capacity in the study area is between 1,667 and 11,976 Mt, i.e. between 11 and 81 years of storage capacity with a current spanish CO{sub 2} production of 148 Mt/year. (Author) 40 refs.

  2. Europa central

    Directory of Open Access Journals (Sweden)

    Karel BARTOSEK

    2010-02-01

    Full Text Available La investigación francesa continúa interesándose por Europa Central. Desde luego, hay límites a este interés en el ambiente general de mi nueva patria: en la ignorancia, producto del largo desinterés de Francia por este espacio después de la Segunda Guerra Mundial, y en el comportamiento y la reflexión de la clase política y de los medios de comunicación (una anécdota para ilustrar este ambiente: durante la preparación de nuestro coloquio «Refugiados e inmigrantes de Europa Central en el movimiento antifascista y la Resistencia en Francia, 1933-1945», celebrado en París en octubre de 1986, el problema de la definición fue planteado concreta y «prácticamente». ¡Y hubo entonces un historiador eminente, para quién Alemania no formaría parte de Europa Central!.

  3. Uso da rugoscopia palatina como ferramenta biométrica: um estudo populacional em Niterói-RJ, Brasil

    Directory of Open Access Journals (Sweden)

    Igor Iuco CASTRO-SILVA

    Full Text Available Introdução: Pesquisas por métodos biométricos auxiliares em perícias têm crescido na Odontologia Legal. Objetivo: Este estudo avaliou a eficácia da rugoscopia palatina na identificação humana. Material e método: Foram utilizados 184 modelos de gesso de estudantes voluntários em Niterói-RJ, para delineamento de suas rugosidades palatinas, sendo classificadas segundo quantidade, direção (sistema de Carrea e formato individual (sistema de Silva, e comparadas às variáveis demográficas sexo, cor da pele e idade. A análise estatística foi realizada com o teste qui-quadrado para amostras independentes, considerando-se p<0,05. Resultado: Houve maior prevalência de 2-7 rugas em homens. O tipo IV de Carrea e o tipo 1 de Silva foram mais evidentes, porém sem diferenças intergrupos significativas, de acordo com as variáveis propostas. Conclusão: A rugoscopia palatina é uma ferramenta biométrica viável e fornece informações morfológicas individuais relevantes, embora sua análise cega e em tempo único não exiba acurácia na estratificação populacional.

  4. The biogeographic origin of a radiation of trees in Madagascar: implications for the assembly of a tropical forest biome.

    Science.gov (United States)

    Federman, Sarah; Dornburg, Alex; Downie, Alexander; Richard, Alison F; Daly, Douglas C; Donoghue, Michael J

    2015-10-05

    Madagascar's rain forests are characterized by extreme and uneven patterns of species richness and endemicity, the biogeographic and evolutionary origins of which are poorly understood. Here we use a time-calibrated phylogeny of a dominant group of trees in Madagascar's eastern rain forests, Canarium, and related Burseraceae (Canarieae), to test biogeographic hypotheses regarding the origin and radiation of the flora of this unique biome. Our findings strongly support the monophyly of Malagasy Canarium, suggesting that this clade represents a previously undocumented in situ radiation. Contrary to expectations of dispersal from Africa during the Oligocene, concurrent with the formation of Madagascar's rain forest biome, our analyses support a late Miocene origin for Malagasy Canarium, probably by long distance dispersal from Southeast Asia. Our study illustrates the importance of considering long distance dispersal as a viable explanation for clades with pantropical distributions diversifying subsequent to the Oligocene, and it highlights the formation of the Indo-Australian Archipelago and associated fast-moving equatorial surface currents, suggesting an under-appreciated evolutionary link among tropical centers of endemism. We postulate that the relatively recent establishment and radiation of Canarium in Madagascar may have been facilitated by the highly stochastic climates associated with these forest ecosystems.

  5. Land-use change and soil type are drivers of fungal and archaeal communities in the Pampa biome.

    Science.gov (United States)

    Lupatini, Manoeli; Jacques, Rodrigo Josemar Seminoti; Antoniolli, Zaida Inês; Suleiman, Afnan Khalil Ahmad; Fulthorpe, Roberta R; Roesch, Luiz Fernando Würdig

    2013-02-01

    The current study aimed to test the hypothesis that both land-use change and soil type are responsible for the major changes in the fungal and archaeal community structure and functioning of the soil microbial community in Brazilian Pampa biome. Soil samples were collected at sites with different land-uses (native grassland, native forest, Eucalyptus and Acacia plantation, soybean and watermelon field) and in a typical toposequence in Pampa biome formed by Paleudult, Albaqualf and alluvial soils. The structure of soil microbial community (archaeal and fungal) was evaluated by ribosomal intergenic spacer analysis and soil functional capabilities were measured by microbial biomass carbon and metabolic quotient. We detected different patterns in microbial community driven by land-use change and soil type, showing that both factors are significant drivers of fungal and archaeal community structure and biomass and microbial activity. Fungal community structure was more affected by land-use and archaeal community was more affected by soil type. Irrespective of the land-use or soil type, a large percentage of operational taxonomic unit were shared among the soils. We accepted the hypothesis that both land-use change and soil type are drivers of archaeal and fungal community structure and soil functional capabilities. Moreover, we also suggest the existence of a soil microbial core.

  6. Hydrology of a Water‐Limited Forest under Climate Change Scenarios: The Case of the Caatinga Biome, Brazil

    Directory of Open Access Journals (Sweden)

    Everton Alves Rodrigues Pinheiro

    2017-02-01

    Full Text Available Given the strong interactions between climate and vegetation, climate change effects on natural and agricultural ecosystems are common objects of research. Reduced water availability is predicted to take place across large regions of the globe, including Northeastern Brazil. The Caatinga, a complex tropical water‐limited ecosystem and the only exclusively Brazilian biome, prevails as the main natural forest of this region. The aim of this study was to examine the soil‐water balance for this biome under a climate‐warming scenario and with reduced rainfall. Climate change projections were assessed from regional circulation models earlier applied to the Brazilian territory. A statistical climate data generator was used to compose a synthetic weather dataset, which was later integrated into a hydrological model. Compared to simulations with current climate for the same site, under the scenario with climate change, transpiration was enhanced by 36%, and soilwater evaporation and interception were reduced by 16% and 34%, respectively. The greatest change in soil‐water components was observed for deep drainage, accounting only for 2% of the annual rainfall. Soil‐plant‐atmosphere fluxes seem to be controlled by the top layer (0.0-0.2 m, which provides 80% of the total transpiration, suggesting that the Caatinga forest may become completely soil‐water pulse dominated under scenarios of reduced water availability.

  7. Ética e pesquisa biomédica em sociedades indígenas no Brasil

    Directory of Open Access Journals (Sweden)

    Coimbra Jr. Carlos E. A.

    1996-01-01

    Full Text Available Este trabalho discute questões relativas à ética da investigação biomédica em populações indígenas brasileiras, em particular no que tange à obtenção de consentimento pós-informacional em pesquisas que envolvam a coleta de amostras biológicas. Enfatiza-se que nada há de específico na legislação atual com respeito à pesquisa biomédica nestas populações. A partir de uma perspectiva antropológica, os autores analisam algumas das dificuldades para a obtenção do consentimento "realmente" informado. Chama-se atenção para a importância das discussões sobre ética em pesquisa face a possibilidade de utilização comercial de amostras biológicas, como exemplificado pelo atual debate sobre patenteamento de material genético humano.

  8. Stormflow influence on nutrient dynamics in micro-catchments under contrasting land use in the Cerrado and Amazon Biomes, Brazil

    Science.gov (United States)

    Edelmann, Katharina; Nóbrega, Rodolfo L. B.; Gerold, Gerhard

    2017-04-01

    The Amazon and Cerrado biomes in Brazil have been under intense land-use change during the past few decades. The conversion of native vegetation to pastures and croplands has caused impacts on hydrological processes in these biomes, resulting in increased streamflow and nutrient fluxes. Our aim was to compare the nutrient dynamics during stormflow events in two pairs of adjacent micro-catchments with similar physical characteristics under contrasting land use, i.e. native vegetation (rainforest or cerrado) and pasture. One pair of catchments was located in the Amazon and the other in the Cerrado, both on the Amazon Agricultural Frontier in the Brazilian states of Mato Grosso and Pará. We collected hydrological and hydrochemical data on 50 stormflow events on a sub-hourly resolution during the wet seasons of 2013 and 2014. We compared the dynamics of total inorganic carbon (TIC), total organic carbon (TOC), dissolved organic carbon (DOC), nitrate (NO3), calcium (Ca), potassium (K), and magnesium (Mg) in different hydrograph parts, i.e. rising limb, peak and recession limb, between the catchments within the same biome. For the Cerrado biome, our findings show that the nutrient concentrations in the stormflows were higher in the pasture catchment than in the cerrado catchment. In the Amazon biome, we found an inverse relationship with higher concentrations in the forest catchment than in the pasture catchment, except for TIC and K. Most nutrients in the cerrado catchment had the highest concentrations in the rising limb. Mg, however, reached highest concentrations during peak discharge, and lowest in the recession limb. In the adjacent pasture catchment, in contrast, the highest nutrient concentrations were observed during the peak discharge (TIC, TOC, Ca) or the recession limb (DOC, NO3, K, Mg) with lowest in the rising limb, except for NO3, which showed the lowest concentrations during peak discharge. In the Amazon forest catchment, the peak discharge showed the

  9. Data resources for range-wide assessment of livestock grazing across the sagebrush biome

    Science.gov (United States)

    Assal, T.J.; Veblen, K.E.; Farinha, M.A.; Aldridge, Cameron L.; Casazza, Michael L.; Pyke, D.A.

    2012-01-01

    The data contained in this series were compiled, modified, and analyzed for the U.S. Geological Survey (USGS) report "Range-Wide Assessment of Livestock Grazing Across the Sagebrush Biome." This report can be accessed through the USGS Publications Warehouse (online linkage: http://pubs.usgs.gov/of/2011/1263/). The dataset contains spatial and tabular data related to Bureau of Land Management (BLM) Grazing Allotments. We reviewed the BLM national grazing allotment spatial dataset available from the GeoCommunicator National Integrated Land System (NILS) website in 2007 (http://www.geocommunicator.gov). We identified several limitations in those data and learned that some BLM State and/or field offices had updated their spatial data to rectify these limitations, but maintained the data outside of NILS. We contacted appropriate BLM offices (State or field, 25 in all) to obtain the most recent data, assessed the data, established a data development protocol, and compiled data into a topologically enforced dataset throughout the area of interest for this project (that is, the pre-settlement distribution of Greater Sage-Grouse in the Western United States). The final database includes three spatial datasets: Allotments (BLM Grazing Allotments), OUT_Polygons (nonallotment polygons used to ensure topology), and Duplicate_Polygon_Allotments. See Appendix 1 of the aforementioned report for complete methods. The tabular data presented here consists of information synthesized by the Land Health Standard (LHS) analysis (Appendix 2), and data obtained from the BLM Rangeland Administration System (http://www.blm.gov/ras/). In 2008, available LHS data for all allotments in all regions were compiled by BLM in response to a Freedom of Information Act (FOIA) request made by a private organization. The BLM provided us with a copy of these data. These data provided three major types of information that were of interest: (1) date(s) (if any) of the most recent LHS evaluation for each

  10. Determining the resilience of carbon dynamics in semi-arid biomes of the Southwestern US to severe drought and altered rainfall patterns

    Science.gov (United States)

    Litvak, M. E.; Krofcheck, D. J.; Hilton, T. W.; Fox, A. M.; Osuna, J. L.

    2011-12-01

    Water is critically important for biotic processes in semi-arid ecosystems and 2011 is developing as one of the most severe drought years on record for many parts of the Southwestern US. To quantify the impact of this severe drought on regional carbon and energy balance, we need a more detailed understanding of how water limitation alters ecosystem processes across a range of semi-arid biomes. We quantified the impact of severe drought and changes in both the quantity and distribution of precipitation on ecosystem biotic structure and function across the range of biomes represented in the NM elevation gradient network (desert grassland, creosote shrubland, juniper savanna, piñon-juniper woodland, ponderosa pine forest and subalpine mixed conifer forest). We compared how daily, seasonal and annual carbon and energy balance and their components in each of these biomes respond to changes in rainfall patterns using continuous measurements of carbon, water and energy exchange and associated measurements in each of these biomes during a 5 year period (2006-2011) that included a severe drought, and large variability in both winter precipitation and the timing and intensity of the monsoon. To understand the underlying mechanisms, we used time series of radiation absorbed by vegetation, surface albedo, soil moisture storage, phenology, gross primary productivity (GPP), ecosystem respiration (Re), and WorldView-2 images acquired pre- and post-monsoon in each of these biomes. In all of the biomes except the desert grassland site, the strength and timing of both winter and monsoon precipitation are important controls over carbon and energy dynamics in this region, though we see site-specific sensitivities across the elevation gradient. Over the past 5 years, carbon dynamics in the desert grassland site appears to be decoupled from winter precipitation. In addition, carbon dynamics in disturbed grassland and pinon-juniper ecosystems were more sensitive to severe drought than

  11. Prioritization methodology for chemical replacement

    Science.gov (United States)

    Cruit, Wendy; Goldberg, Ben; Schutzenhofer, Scott

    1995-01-01

    Since United States of America federal legislation has required ozone depleting chemicals (class 1 & 2) to be banned from production, The National Aeronautics and Space Administration (NASA) and industry have been required to find other chemicals and methods to replace these target chemicals. This project was initiated as a development of a prioritization methodology suitable for assessing and ranking existing processes for replacement 'urgency.' The methodology was produced in the form of a workbook (NASA Technical Paper 3421). The final workbook contains two tools, one for evaluation and one for prioritization. The two tools are interconnected in that they were developed from one central theme - chemical replacement due to imposed laws and regulations. This workbook provides matrices, detailed explanations of how to use them, and a detailed methodology for prioritization of replacement technology. The main objective is to provide a GUIDELINE to help direct the research for replacement technology. The approach for prioritization called for a system which would result in a numerical rating for the chemicals and processes being assessed. A Quality Function Deployment (QFD) technique was used in order to determine numerical values which would correspond to the concerns raised and their respective importance to the process. This workbook defines the approach and the application of the QFD matrix. This technique: (1) provides a standard database for technology that can be easily reviewed, and (2) provides a standard format for information when requesting resources for further research for chemical replacement technology. Originally, this workbook was to be used for Class 1 and Class 2 chemicals, but it was specifically designed to be flexible enough to be used for any chemical used in a process (if the chemical and/or process needs to be replaced). The methodology consists of comparison matrices (and the smaller comparison components) which allow replacement technology

  12. central t

    Directory of Open Access Journals (Sweden)

    Manuel R. Piña Monarrez

    2007-01-01

    Full Text Available Dado que la Regresión Ridge (RR, es una estimación sesgada que parte de la solución de la regresión de Mínimos Cuadrados (MC, es vital establecer las condiciones para las que la distribución central t de Student que se utiliza en la prueba de hipótesis en MC, sea también aplicable a la regresión RR. La prueba de este importante resultado se presenta en este artículo.

  13. Documentation of meteorological data from the coniferous forest biome primary station in Oregon.

    Science.gov (United States)

    R.H. Waring; H.R. Holbo; R.P. Bueb; R.L. Fredriksen

    1978-01-01

    As part of the International Biological Program, a primary meteorological station was installed in the west-central Cascade Range of Oregon. Short-wave solar radiation, air temperature, dewpoint temperature, windspeed, and precipitation are recorded continuously. Climatic data are summarized in a daily record available from May 11, 1972, to date. This report details...

  14. Design Methodology - Design Synthesis

    DEFF Research Database (Denmark)

    Andreasen, Mogens Myrup

    2003-01-01

    Design Methodology is part of our practice and our knowledge about designing, and it has been strongly supported by the establishing and work of a design research community. The aim of this article is to broaden the reader¿s view of designing and Design Methodology. This is done by sketching...... the development of Design Methodology through time and sketching some important approaches and methods. The development is mainly forced by changing industrial condition, by the growth of IT support for designing, but also by the growth of insight into designing created by design researchers.......ABSTRACT Design Methodology shall be seen as our understanding of how to design; it is an early (emerging late 60ies) and original articulation of teachable and learnable methodics. The insight is based upon two sources: the nature of the designed artefacts and the nature of human designing. Today...

  15. GPS system simulation methodology

    Science.gov (United States)

    Ewing, Thomas F.

    1993-01-01

    The following topics are presented: background; Global Positioning System (GPS) methodology overview; the graphical user interface (GUI); current models; application to space nuclear power/propulsion; and interfacing requirements. The discussion is presented in vugraph form.

  16. Hazard classification methodology

    International Nuclear Information System (INIS)

    Brereton, S.J.

    1996-01-01

    This document outlines the hazard classification methodology used to determine the hazard classification of the NIF LTAB, OAB, and the support facilities on the basis of radionuclides and chemicals. The hazard classification determines the safety analysis requirements for a facility

  17. Nonlinear Image Denoising Methodologies

    National Research Council Canada - National Science Library

    Yufang, Bao

    2002-01-01

    In this thesis, we propose a theoretical as well as practical framework to combine geometric prior information to a statistical/probabilistic methodology in the investigation of a denoising problem...

  18. Clinical trial methodology

    National Research Council Canada - National Science Library

    Peace, Karl E; Chen, Ding-Geng

    2011-01-01

    "Now viewed as its own scientific discipline, clinical trial methodology encompasses the methods required for the protection of participants in a clinical trial and the methods necessary to provide...

  19. Central sleep apnea

    Science.gov (United States)

    Sleep apnea - central; Obesity - central sleep apnea; Cheyne-Stokes - central sleep apnea; Heart failure - central sleep apnea ... Central sleep apnea results when the brain temporarily stops sending signals to the muscles that control breathing. The condition ...

  20. Science framework for conservation and restoration of the sagebrush biome: Linking the Department of the Interior’s Integrated Rangeland Fire Management Strategy to long-term strategic conservation actions

    Science.gov (United States)

    J.C. Chambers; J.L. Beck; J.B. Bradford; J. Bybee; S. Campbell; J. Carlson; T.J. Christiansen; K.J. Clause; G. Collins; M.R. Crist; J.B. Dinkins; K.E. Doherty; F. Edwards; S. Espinosa; K.A. Griffin; P. Griffin; J.R. Haas; S.E. Hanser; D.W. Havlina; K.F. Henke; J.D. Hennig; L.A. Joyce; F.M. Kilkenny; S.M. Kulpa; L.L. Kurth; J.D. Maestas; M. Manning; K.E. Mayer; B.A. Mealor; C. McCarthy; M. Pellant; M.A. Perea; K.L. Prentice; D.A. Pyke; L.A. Wiechman; A. Wuenschel

    2017-01-01

    The Science Framework is intended to link the Department of the Interior’s Integrated Rangeland Fire Management Strategy with long-term strategic conservation actions in the sagebrush biome. The Science Framework provides a multiscale approach for prioritizing areas for management and determining effective management strategies within the sagebrush biome. The emphasis...

  1. Methodology of sustainability accounting

    Directory of Open Access Journals (Sweden)

    O.H. Sokil

    2017-03-01

    Full Text Available Modern challenges of the theory and methodology of accounting are realized through the formation and implementation of new concepts, the purpose of which is to meet the needs of users in standard and unique information. The development of a methodology for sustainability accounting is a key aspect of the management of an economic entity. The purpose of the article is to form the methodological bases of accounting for sustainable development and determine its goals, objectives, object, subject, methods, functions and key aspects. The author analyzes the theoretical bases of the definition and considers the components of the traditional accounting methodology. Generalized structural diagram of the methodology for accounting for sustainable development is offered in the article. The complex of methods and principles of sustainable development accounting for systematized and non-standard provisions has been systematized. The new system of theoretical and methodological provisions of accounting for sustainable development is justified in the context of determining its purpose, objective, subject, object, methods, functions and key aspects.

  2. Large sample NAA facility and methodology development

    International Nuclear Information System (INIS)

    Roth, C.; Gugiu, D.; Barbos, D.; Datcu, A.; Aioanei, L.; Dobrea, D.; Taroiu, I. E.; Bucsa, A.; Ghinescu, A.

    2013-01-01

    A Large Sample Neutron Activation Analysis (LSNAA) facility has been developed at the TRIGA- Annular Core Pulsed Reactor (ACPR) operated by the Institute for Nuclear Research in Pitesti, Romania. The central irradiation cavity of the ACPR core can accommodate a large irradiation device. The ACPR neutron flux characteristics are well known and spectrum adjustment techniques have been successfully applied to enhance the thermal component of the neutron flux in the central irradiation cavity. An analysis methodology was developed by using the MCNP code in order to estimate counting efficiency and correction factors for the major perturbing phenomena. Test experiments, comparison with classical instrumental neutron activation analysis (INAA) methods and international inter-comparison exercise have been performed to validate the new methodology. (authors)

  3. Central hypothyroidism

    Directory of Open Access Journals (Sweden)

    Vishal Gupta

    2011-01-01

    Full Text Available Central hypothyroidism is defined as hypothyroidism due to insufficient stimulation by thyroid stimulating hormone (TSH of an otherwise normal thyroid gland. It has an estimated prevalence of approximately 1 in 80,000 to 1 in 120,000. It can be secondary hypothyroidism (pituitary or tertiary hypothyroidism (hypothalamus in origin. In children, it is usually caused by craniopharyngiomas or previous cranial irradiation for brain tumors or hematological malignancies. In adults, it is usually due to pituitary macroadenomas, pituitary surgeries or post-irradiation. Fatigue and peripheral edema are the most specific clinical features. Diagnosis is established by the presence of normal to low-normal TSH on the background of low-normal thyroid hormones, confirmed by the thyrotropin releasing hormone stimulation test. Therapy includes use of levothyroxine titrated to improvement in symptomology and keeping free T4 in the upper limit of normal reference range.

  4. Regional Shelter Analysis Methodology

    Energy Technology Data Exchange (ETDEWEB)

    Dillon, Michael B. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Dennison, Deborah [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Kane, Jave [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Walker, Hoyt [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Miller, Paul [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2015-08-01

    The fallout from a nuclear explosion has the potential to injure or kill 100,000 or more people through exposure to external gamma (fallout) radiation. Existing buildings can reduce radiation exposure by placing material between fallout particles and exposed people. Lawrence Livermore National Laboratory was tasked with developing an operationally feasible methodology that could improve fallout casualty estimates. The methodology, called a Regional Shelter Analysis, combines the fallout protection that existing buildings provide civilian populations with the distribution of people in various locations. The Regional Shelter Analysis method allows the consideration of (a) multiple building types and locations within buildings, (b) country specific estimates, (c) population posture (e.g., unwarned vs. minimally warned), and (d) the time of day (e.g., night vs. day). The protection estimates can be combined with fallout predictions (or measurements) to (a) provide a more accurate assessment of exposure and injury and (b) evaluate the effectiveness of various casualty mitigation strategies. This report describes the Regional Shelter Analysis methodology, highlights key operational aspects (including demonstrating that the methodology is compatible with current tools), illustrates how to implement the methodology, and provides suggestions for future work.

  5. Simulating carbon and water fluxes at Arctic and boreal ecosystems in Alaska by optimizing the modified BIOME-BGC with eddy covariance data

    Science.gov (United States)

    Ueyama, M.; Kondo, M.; Ichii, K.; Iwata, H.; Euskirchen, E. S.; Zona, D.; Rocha, A. V.; Harazono, Y.; Nakai, T.; Oechel, W. C.

    2013-12-01

    To better predict carbon and water cycles in Arctic ecosystems, we modified a process-based ecosystem model, BIOME-BGC, by introducing new processes: change in active layer depth on permafrost and phenology of tundra vegetation. The modified BIOME-BGC was optimized using an optimization method. The model was constrained using gross primary productivity (GPP) and net ecosystem exchange (NEE) at 23 eddy covariance sites in Alaska, and vegetation/soil carbon from a literature survey. The model was used to simulate regional carbon and water fluxes of Alaska from 1900 to 2011. Simulated regional fluxes were validated with upscaled GPP, ecosystem respiration (RE), and NEE based on two methods: (1) a machine learning technique and (2) a top-down model. Our initial simulation suggests that the original BIOME-BGC with default ecophysiological parameters substantially underestimated GPP and RE for tundra and overestimated those fluxes for boreal forests. We will discuss how optimization using the eddy covariance data impacts the historical simulation by comparing the new version of the model with simulated results from the original BIOME-BGC with default ecophysiological parameters. This suggests that the incorporation of the active layer depth and plant phenology processes is important to include when simulating carbon and water fluxes in Arctic ecosystems.

  6. BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases.

    Science.gov (United States)

    Xu, Yanjun; Yang, Haixiu; Wu, Tan; Dong, Qun; Sun, Zeguo; Shang, Desi; Li, Feng; Xu, Yingqi; Su, Fei; Liu, Siyao; Zhang, Yunpeng; Li, Xia

    2017-01-01

    BioM2MetDisease is a manually curated database that aims to provide a comprehensive and experimentally supported resource of associations between metabolic diseases and various biomolecules. Recently, metabolic diseases such as diabetes have become one of the leading threats to people’s health. Metabolic disease associated with alterations of multiple types of biomolecules such as miRNAs and metabolites. An integrated and high-quality data source that collection of metabolic disease associated biomolecules is essential for exploring the underlying molecular mechanisms and discovering novel therapeutics. Here, we developed the BioM2MetDisease database, which currently documents 2681 entries of relationships between 1147 biomolecules (miRNAs, metabolites and small molecules/drugs) and 78 metabolic diseases across 14 species. Each entry includes biomolecule category, species, biomolecule name, disease name, dysregulation pattern, experimental technique, a brief description of metabolic disease-biomolecule relationships, the reference, additional annotation information etc. BioM2MetDisease provides a user-friendly interface to explore and retrieve all data conveniently. A submission page was also offered for researchers to submit new associations between biomolecules and metabolic diseases. BioM2MetDisease provides a comprehensive resource for studying biology molecules act in metabolic diseases, and it is helpful for understanding the molecular mechanisms and developing novel therapeutics for metabolic diseases. http://www.bio-bigdata.com/BioM2MetDisease/. © The Author(s) 2017. Published by Oxford University Press.

  7. Assessment of water pollution in the Brazilian Pampa biome by means of stress biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii (Anura: Hylidae

    Directory of Open Access Journals (Sweden)

    TG Santos

    2015-06-01

    Full Text Available The Brazilian Pampa biome is currently under constant threat due to increase of agriculture and improper management of urban effluents. Studies with a focus on the assessment of impacts caused by human activities in this biome are scarce. In the present study, we measured stress-related biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii, an endemic species to the Pampa biome, and tested its suitability as a bioindicator for the assessment of potential aquatic contamination in selected ponds (S1 and S2 nearby agricultural areas in comparison to a reference site. A significant decrease in acetylcholinesterase activity was observed in S2 when compared to S1 and reference. The levels of total-hydroperoxides were increased in S2 site. In parallel, increased activity of the antioxidant enzymes catalase, superoxide dismutase and glutathione S-transferase were observed in S2 when compared to S1 and reference. Further studies are necessary in order to correlate the changes observed here with different chemical stressors in water, as well as to elucidate mechanisms of toxicity induced by pesticides in amphibian species endemic to the Pampa biome. Nevertheless, our study validates Phyllomedusa iheringii as a valuable bioindicator in environmental studies.

  8. Assessment of water pollution in the Brazilian Pampa biome by means of stress biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii (Anura: Hylidae).

    Science.gov (United States)

    Santos, T G; Melo, R; Costa-Silva, D G; Nunes, Mem; Rodrigues, N R; Franco, J L

    2015-01-01

    The Brazilian Pampa biome is currently under constant threat due to increase of agriculture and improper management of urban effluents. Studies with a focus on the assessment of impacts caused by human activities in this biome are scarce. In the present study, we measured stress-related biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii, an endemic species to the Pampa biome, and tested its suitability as a bioindicator for the assessment of potential aquatic contamination in selected ponds (S1 and S2) nearby agricultural areas in comparison to a reference site. A significant decrease in acetylcholinesterase activity was observed in S2 when compared to S1 and reference. The levels of total-hydroperoxides were increased in S2 site. In parallel, increased activity of the antioxidant enzymes catalase, superoxide dismutase and glutathione S-transferase were observed in S2 when compared to S1 and reference. Further studies are necessary in order to correlate the changes observed here with different chemical stressors in water, as well as to elucidate mechanisms of toxicity induced by pesticides in amphibian species endemic to the Pampa biome. Nevertheless, our study validates Phyllomedusa iheringii as a valuable bioindicator in environmental studies.

  9. Adapting a rapid assessment protocol to environmentally assess palm swamp (Veredas) springs in the Cerrado biome, Brazil.

    Science.gov (United States)

    Guimarães, Ariane; de Lima Rodrigues, Aline Sueli; Malafaia, Guilherme

    2017-10-30

    The exploitation and degradation of natural environments exert intense pressure on important ecosystems worldwide. Thus, it is necessary developing or adapting assessment methods to monitor environmental changes and to generate results to be applied to environmental management programs. The Brazilian Veredas (phytophysiognomies typical to the Cerrado biome) are threatened by several human activities; thus, the aim of the present study is to adapt a rapid assessment protocol (RAP) to be applied to Veredas springs, by using the upper course of the Vai-e-Vem stream watershed (Ipameri County, Goiás State, Brazil). Therefore, several springs in the study site were visited and 11 of them were considered Veredas springs. After the RAP was adapted, the instrument was validated and used to environmentally assess the springs in order to demonstrate its applicability. The present study has provided an instrument of option to monitor Veredas springs.

  10. Circulation of canine parvovirus among dogs living in human-wildlife interface in the Atlantic forest biome, Brazil

    Directory of Open Access Journals (Sweden)

    Flávia V. Vieira

    2017-12-01

    Full Text Available Despite of the role of domestic dogs as reservoirs for threatening viral diseases for wild carnivores, few studies have focused to identify circulation of viruses among dogs living in human/wildlife interfaces. To identify canine parvovirus (CPV types circulating in dogs living in an Atlantic forest biome, faecal samples (n = 100 were collected at the same period (one week corresponding to each of four areas, during 2014 to 2016 and corresponded to 100 different individuals. CPV was isolated in cell culture from 67 out 100 (67% samples from healthy dogs. Cytopathic effects were characterized by total or partial cell culture lysis. Genome sequences of CPV-2a (10%, CPV-2b (7% and CPV-2c (50% were concomitantly detected by PCR and nucleotide sequencing. The current study addresses the importance of monitoring CPV circulation among dogs presenting potential contact with wildlife species.

  11. La asignación de recursos y la investigación biomédica

    Directory of Open Access Journals (Sweden)

    Artells Herrero, Juan José

    2001-10-01

    Full Text Available Not available

    Nadie parece cuestionar, al menos desde el punto de vista teórico, que la Investigación junto con la Docencia, son compañeros inseparables del objetivo último de un Sistema Sanitario moderno y consolidado, que no es otro que el de dar respuesta eficiente a las expectativas de salud de las personas. Aspectos como asignación de recursos, priorización, cadena de valor, coste de oportunidad, necesidad, contrato programa, producción conjunta, bien público, reputación, riesgo y especificidad de activos, se tratan a lo largo del artículo. Los recursos que a tal fin se asignen, la valoración de prioridades y el análisis conceptual de lo que cabe considerar como investigación biomédica, son objeto de tratamiento en esta exposición.

  12. Procedimiento para la obtención de células madre mesenquimales para uso biomédico

    OpenAIRE

    Menéndez, Pablo; Ligero, G.; Sánchez, L.; Gutiérrez-Aranda, I.; Rodríguez-González, René; Rubio-Amador, Ruth; Bueno, C.; Ramos-Mejía, Verónica; Delgado, M.

    2010-01-01

    [ES] Procedimiento de obtención de células madre mesenquimales para uso biomédico. La presente invención describe un procedimiento de obtención de CMMs a partir de cultivos de PSC, mediante la inhibición de la via de señalización SMAD2/3, preferentemente con el inhibidor quimico 4-[4-(1,3- Benzodioxol-5-il)-5-(2-piridinil)-1 H-imidazol-2-il] benzamida. Las PSCCMMs descritas en la presente invención, son capaces de diferenciarse a células de la línea osteogénica, condrogénica y adi...

  13. A Changing Number of Alternative States in the Boreal Biome: Reproducibility Risks of Replacing Remote Sensing Products.

    Science.gov (United States)

    Xu, Chi; Holmgren, Milena; Van Nes, Egbert H; Hirota, Marina; Chapin, F Stuart; Scheffer, Marten

    2015-01-01

    Publicly available remote sensing products have boosted science in many ways. The openness of these data sources suggests high reproducibility. However, as we show here, results may be specific to versions of the data products that can become unavailable as new versions are posted. We focus on remotely-sensed tree cover. Recent studies have used this public resource to detect multi-modality in tree cover in the tropical and boreal biomes. Such patterns suggest alternative stable states separated by critical tipping points. This has important implications for the potential response of these ecosystems to global climate change. For the boreal region, four distinct ecosystem states (i.e., treeless, sparse and dense woodland, and boreal forest) were previously identified by using the Collection 3 data of MODIS Vegetation Continuous Fields (VCF). Since then, the MODIS VCF product has been updated to Collection 5; and a Landsat VCF product of global tree cover at a fine spatial resolution of 30 meters has been developed. Here we compare these different remote-sensing products of tree cover to show that identification of alternative stable states in the boreal biome partly depends on the data source used. The updated MODIS data and the newer Landsat data consistently demonstrate three distinct modes around similar tree-cover values. Our analysis suggests that the boreal region has three modes: one sparsely vegetated state (treeless), one distinct 'savanna-like' state and one forest state, which could be alternative stable states. Our analysis illustrates that qualitative outcomes of studies may change fundamentally as new versions of remote sensing products are used. Scientific reproducibility thus requires that old versions remain publicly available.

  14. Terrestrial Macrofungal Diversity from the Tropical Dry Evergreen Biome of Southern India and Its Potential Role in Aerobiology.

    Science.gov (United States)

    Priyamvada, Hema; Akila, M; Singh, Raj Kamal; Ravikrishna, R; Verma, R S; Philip, Ligy; Marathe, R R; Sahu, L K; Sudheer, K P; Gunthe, S S

    2017-01-01

    Macrofungi have long been investigated for various scientific purposes including their food and medicinal characteristics. Their role in aerobiology as a fraction of the primary biological aerosol particles (PBAPs), however, has been poorly studied. In this study, we present a source of macrofungi with two different but interdependent objectives: (i) to characterize the macrofungi from a tropical dry evergreen biome in southern India using advanced molecular techniques to enrich the database from this region, and (ii) to assess whether identified species of macrofungi are a potential source of atmospheric PBAPs. From the DNA analysis, we report the diversity of the terrestrial macrofungi from a tropical dry evergreen biome robustly supported by the statistical analyses for diversity conclusions. A total of 113 macrofungal species belonging to 54 genera and 23 families were recorded, with Basidiomycota and Ascomycota constituting 96% and 4% of the species, respectively. The highest species richness was found in the family Agaricaceae (25.3%) followed by Polyporaceae (15.3%) and Marasmiaceae (10.8%). The difference in the distribution of commonly observed macrofungal families over this location was compared with other locations in India (Karnataka, Kerala, Maharashtra, and West Bengal) using two statistical tests. The distributions of the terrestrial macrofungi were distinctly different in each ecosystem. We further attempted to demonstrate the potential role of terrestrial macrofungi as a source of PBAPs in ambient air. In our opinion, the findings from this ecosystem of India will enhance our understanding of the distribution, diversity, ecology, and biological prospects of terrestrial macrofungi as well as their potential to contribute to airborne fungal aerosols.

  15. Population Genetic Structure of Cnesterodon decemmaculatus (Poeciliidae): A Freshwater Look at the Pampa Biome in Southern South America.

    Science.gov (United States)

    Ramos-Fregonezi, Aline M C; Malabarba, Luiz R; Fagundes, Nelson J R

    2017-01-01

    The Pampas is a Neotropical biome formed primarily by low altitude grasslands and encompasses the southernmost portion of Brazil, Uruguay, and part of Argentina. Despite the high level of endemism, and its significant environmental heterogeneity, Pampean species are underrepresented in phylogeographic studies, especially aquatic organisms. The Pampean hydrological system resulted from a long history of tectonism, climate, and sea level changes since the Neogene. In this study, we examined the population genetic structure of Cnesterodon decemmaculatus , a freshwater fish species that occurs throughout most of the Pampa biome. We characterized mitochondrial and autosomal genetic lineages in populations sampled from Southern Brazil and Uruguay to investigate (1) the correspondence between current drainage systems and evolutionary lineages, (2) the demographic history for each genetic lineage, and (3) the temporal depth of these lineages. Overall, we found that the major evolutionary lineages in this species are strongly related to the main Pampean drainage systems, even though stream capture events may have affected the distribution of genetic lineages among drainages. There was evidence for recent population growth in the lineages occupying drainages closest to the shore, which may indicate the effect of quaternary sea-level changes. In general, divergence time estimates among evolutionary lineages were shallow, ranging from 20,000 to 800,000 years before present, indicating a geologically recent history for this group, as previously reported in other Pampean species. A Bayesian phylogeographical reconstruction suggested that an ancestral lineage probably colonized the Uruguay River Basin, and then expanded throughout the Pampas. This evolutionary scenario may represent useful starting models for other freshwater species having a similar distribution.

  16. Optimizing selective cutting strategies for maximum carbon stocks and yield of Moso bamboo forest using BIOME-BGC model.

    Science.gov (United States)

    Mao, Fangjie; Zhou, Guomo; Li, Pingheng; Du, Huaqiang; Xu, Xiaojun; Shi, Yongjun; Mo, Lufeng; Zhou, Yufeng; Tu, Guoqing

    2017-04-15

    The selective cutting method currently used in Moso bamboo forests has resulted in a reduction of stand productivity and carbon sequestration capacity. Given the time and labor expense involved in addressing this problem manually, simulation using an ecosystem model is the most suitable approach. The BIOME-BGC model was improved to suit managed Moso bamboo forests, which was adapted to include age structure, specific ecological processes and management measures of Moso bamboo forest. A field selective cutting experiment was done in nine plots with three cutting intensities (high-intensity, moderate-intensity and low-intensity) during 2010-2013, and biomass of these plots was measured for model validation. Then four selective cutting scenarios were simulated by the improved BIOME-BGC model to optimize the selective cutting timings, intervals, retained ages and intensities. The improved model matched the observed aboveground carbon density and yield of different plots, with a range of relative error from 9.83% to 15.74%. The results of different selective cutting scenarios suggested that the optimal selective cutting measure should be cutting 30% culms of age 6, 80% culms of age 7, and all culms thereafter (above age 8) in winter every other year. The vegetation carbon density and harvested carbon density of this selective cutting method can increase by 74.63% and 21.5%, respectively, compared with the current selective cutting measure. The optimized selective cutting measure developed in this study can significantly promote carbon density, yield, and carbon sink capacity in Moso bamboo forests. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. Scale and the isotopic record of C4 plants in pedogenic carbonate: from the biome to the rhizospere.

    Energy Technology Data Exchange (ETDEWEB)

    Monger, Dr. H Curtis [New Mexico State University, Las Cruces; Cole, David R [ORNL; Buck, Dr. Brenda [University of Nevada, Las Vegas; Gallegos, Robert [Sant fe Water Division

    2009-01-01

    The 13C/12C ratio in pedogenic carbonate (i.e., CaCO3 formed in soil) is a significant tool for investigating C4 biomes of the past. However, the paleoecological meaning of d13C values in pedogenic carbonate can change with the scale at which one considers the data. We describe studies of modern soils, fossil soils, and vegetation change in the Chihuahuan Desert of North America and elsewhere that reveal four scales important for paleoecologic interpretations. (1) At the broadest scale, the biome scale (hundreds to millions of km2), an isotopic record interpreted as C3 vegetation replacing C4 grasslands may indicate invading C3 woody shrubs instead of expanding C3 forests (a common interpretation). (2) At the landscape scale (several tens of m2 to hundreds of km2), the accuracy of scaling up paleoclimatic interpretations to a regional level is affected by the landform containing the isotopic record. (3) At the soil-profile scale (cm2 to m2), soil profiles with multiple generations of carbonate mixed together have a lower-resolution paleoecologic record than soil profiles repeatedly buried. (4) At the rhizosphere scale (lm2 to cm2), carbonate formed on roots lack the 14 17 enrichment observed at broader scales, revealing different fractionation processes at different scales. A multi-scale approach in dealing with d13C in pedogenic carbonate will increase the accuracy of paleoecologic interpretations and understanding of soil geomorphic climatic interactions that affect boundaries between C4 and C3 vegetation.

  18. Population Genetic Structure of Cnesterodon decemmaculatus (Poeciliidae: A Freshwater Look at the Pampa Biome in Southern South America

    Directory of Open Access Journals (Sweden)

    Aline M. C. Ramos-Fregonezi

    2017-12-01

    Full Text Available The Pampas is a Neotropical biome formed primarily by low altitude grasslands and encompasses the southernmost portion of Brazil, Uruguay, and part of Argentina. Despite the high level of endemism, and its significant environmental heterogeneity, Pampean species are underrepresented in phylogeographic studies, especially aquatic organisms. The Pampean hydrological system resulted from a long history of tectonism, climate, and sea level changes since the Neogene. In this study, we examined the population genetic structure of Cnesterodon decemmaculatus, a freshwater fish species that occurs throughout most of the Pampa biome. We characterized mitochondrial and autosomal genetic lineages in populations sampled from Southern Brazil and Uruguay to investigate (1 the correspondence between current drainage systems and evolutionary lineages, (2 the demographic history for each genetic lineage, and (3 the temporal depth of these lineages. Overall, we found that the major evolutionary lineages in this species are strongly related to the main Pampean drainage systems, even though stream capture events may have affected the distribution of genetic lineages among drainages. There was evidence for recent population growth in the lineages occupying drainages closest to the shore, which may indicate the effect of quaternary sea-level changes. In general, divergence time estimates among evolutionary lineages were shallow, ranging from 20,000 to 800,000 years before present, indicating a geologically recent history for this group, as previously reported in other Pampean species. A Bayesian phylogeographical reconstruction suggested that an ancestral lineage probably colonized the Uruguay River Basin, and then expanded throughout the Pampas. This evolutionary scenario may represent useful starting models for other freshwater species having a similar distribution.

  19. Scale and the isotopic record of C4 plants in pedogenic carbonate: from the biome to the rhizosphere

    Energy Technology Data Exchange (ETDEWEB)

    Monger, Dr. H Curtis [New Mexico State University, Las Cruces; Cole, David [Ohio State University; Buck, Dr. Brenda [University of Nevada, Las Vegas; Gallegos, Robert [Sant fe Water Division

    2009-01-01

    The 13C/12C ratio in pedogenic carbonate (i.e., CaCO3 formed in soil) is a significant tool for investigating C4 biomes of the past. However, the paleoecological meaning of d13C values in pedogenic carbonate can change with the scale at which one considers the data. We describe studies of modern soils, fossil soils, and vegetation change in the Chihuahuan Desert of North America and elsewhere that reveal four scales important for paleoecologic interpretations. (1) At the broadest scale, the biome scale (hundreds to millions of km2), an isotopic record interpreted as C3 vegetation replacing C4 grasslands may indicate invading C3 woody shrubs instead of expanding C3 forests (a common interpretation). (2) At the landscape scale (several tens of m2 to hundreds of km2), the accuracy of scaling up paleoclimatic interpretations to a regional level is affected by the landform containing the isotopic record. (3) At the soil-profile scale (cm2 to m2), soil profiles with multiple generations of carbonate mixed together have a lower-resolution paleoecologic record than soil profiles repeatedly buried. (4) At the rhizosphere scale (lm2 to cm2), carbonate formed on roots lack the 14 17 enrichment observed at broader scales, revealing different fractionation processes at different scales. A multi-scale approach in dealing with d13C in pedogenic carbonate will increase the accuracy of paleoecologic interpretations and understanding of soil geomorphic climatic interactions that affect boundaries between C4 and C3 vegetation.

  20. The policy trail methodology

    DEFF Research Database (Denmark)

    Holford, John; Larson, Anne; Melo, Susana

    of ‘policy trail’, arguing that it can overcome ‘methodological nationalism’ and link structure and agency in research on the ‘European educational space’. The ‘trail’ metaphor, she suggests, captures the intentionality and the erratic character of policy. The trail connects sites and brings about change......, but – although policy may be intended to be linear, with specific outcomes – policy often has to bend, and sometimes meets insurmountable obstacles. This symposium outlines and develops the methodology, but also reports on research undertaken within a major FP7 project (LLLIght’in’Europe, 2012-15) which made use......In recent years, the “policy trail” has been proposed as a methodology appropriate to the shifting and fluid governance of lifelong learning in the late modern world (Holford et al. 2013, Holford et al. 2013, Cort 2014). The contemporary environment is marked by multi-level governance (global...

  1. Changing methodologies in TESOL

    CERN Document Server

    Spiro, Jane

    2013-01-01

    Covering core topics from vocabulary and grammar to teaching, writing speaking and listening, this textbook shows you how to link research to practice in TESOL methodology. It emphasises how current understandings have impacted on the language classroom worldwide and investigates the meaning of 'methods' and 'methodology' and the importance of these for the teacher: as well as the underlying assumptions and beliefs teachers bring to bear in their practice. By introducing you to language teaching approaches, you will explore the way these are influenced by developments in our understanding of l

  2. Creativity in phenomenological methodology

    DEFF Research Database (Denmark)

    Dreyer, Pia; Martinsen, Bente; Norlyk, Annelise

    2014-01-01

    on the methodologies of van Manen, Dahlberg, Lindseth & Norberg, the aim of this paper is to argue that the increased focus on creativity and arts in research methodology is valuable to gain a deeper insight into lived experiences. We illustrate this point through examples from empirical nursing studies, and discuss......Nursing research is often concerned with lived experiences in human life using phenomenological and hermeneutic approaches. These empirical studies may use different creative expressions and art-forms to describe and enhance an embodied and personalised understanding of lived experiences. Drawing...... may support a respectful renewal of phenomenological research traditions in nursing research....

  3. Investigación biomédica, intereses económicos y divulgación periodística

    Directory of Open Access Journals (Sweden)

    Roberto Germán Zurriaráin

    2017-01-01

    Full Text Available Este artículo pretende afirmar que toda investigación, especialmente la biomédica, para que sea precisamente tal, tiene que poseer una dimensión ética. Y goza de esta dimensión siempre y cuando vaya en beneficio del propio ser humano. Sin ella no se puede hablar de progreso en la investigación biomédica. Luego, solamente se puede denominar “progreso” si hablamos de una investigación que vaya en beneficio de cada uno de los seres humanos. Así es, la investigación biomédica se tiene que traducir en un avanzar del ser humano en humanidad. Pero desgracia- damente muchas veces no ocurre esto. Se llama investigación biomédica a todo, independien- temente de que posea o no una dimensión ética, considerada esta como una instancia exterior. Esta dimensión, insertada en la propia investigación biomédica, es sustituida por otros intere- ses, sobre todo de carácter económico, especialmente en reproducción humana artificial. Así también, los medios de comunicación social hacen eco de este tipo de estudios en biomedicina. Pero muchas veces los medios buscan más las emociones del espectador que su responsabilidad por transmitir noticias con rigor y veracidad.

  4. Computer Network Operations Methodology

    Science.gov (United States)

    2004-03-01

    means of their computer information systems. Disrupt - This type of attack focuses on disrupting as “attackers might surreptitiously reprogram enemy...by reprogramming the computers that control distribution within the power grid. A disruption attack introduces disorder and inhibits the effective...between commanders. The use of methodologies is widespread and done subconsciously to assist individuals in decision making. The processes that

  5. SCI Hazard Report Methodology

    Science.gov (United States)

    Mitchell, Michael S.

    2010-01-01

    This slide presentation reviews the methodology in creating a Source Control Item (SCI) Hazard Report (HR). The SCI HR provides a system safety risk assessment for the following Ares I Upper Stage Production Contract (USPC) components (1) Pyro Separation Systems (2) Main Propulsion System (3) Reaction and Roll Control Systems (4) Thrust Vector Control System and (5) Ullage Settling Motor System components.

  6. A Functional HAZOP Methodology

    DEFF Research Database (Denmark)

    Liin, Netta; Lind, Morten; Jensen, Niels

    2010-01-01

    A HAZOP methodology is presented where a functional plant model assists in a goal oriented decomposition of the plant purpose into the means of achieving the purpose. This approach leads to nodes with simple functions from which the selection of process and deviation variables follow directly...

  7. Complicating Methodological Transparency

    Science.gov (United States)

    Bridges-Rhoads, Sarah; Van Cleave, Jessica; Hughes, Hilary E.

    2016-01-01

    A historical indicator of the quality, validity, and rigor of qualitative research has been the documentation and disclosure of the behind-the-scenes work of the researcher. In this paper, we use what we call "methodological data" as a tool to complicate the possibility and desirability of such transparency. Specifically, we draw on our…

  8. Methodological Advances in Dea

    NARCIS (Netherlands)

    L. Cherchye (Laurens); G.T. Post (Thierry)

    2001-01-01

    textabstractWe survey the methodological advances in DEA over the last 25 years and discuss the necessary conditions for a sound empirical application. We hope this survey will contribute to the further dissemination of DEA, the knowledge of its relative strengths and weaknesses, and the tools

  9. NUSAM Methodology for Assessment.

    Energy Technology Data Exchange (ETDEWEB)

    Leach, Janice [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Snell, Mark K. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2016-07-01

    This document provides a methodology for the performance-based assessment of security systems designed for the protection of nuclear and radiological materials and the processes that produce and/or involve them. It is intended for use with both relatively simple installations and with highly regulated complex sites with demanding security requirements.

  10. MIRD methodology. Part 1

    International Nuclear Information System (INIS)

    Rojo, Ana M.

    2004-01-01

    This lecture develops the MIRD (Medical Internal Radiation Dose) methodology for the evaluation of the internal dose due to the administration of radiopharmaceuticals. In this first part, the basic concepts and the main equations are presented. The ICRP Dosimetric System is also explained. (author)

  11. Response Surface Methodology

    NARCIS (Netherlands)

    Kleijnen, Jack P.C.

    2014-01-01

    Abstract: This chapter first summarizes Response Surface Methodology (RSM), which started with Box and Wilson’s article in 1951 on RSM for real, non-simulated systems. RSM is a stepwise heuristic that uses first-order polynomials to approximate the response surface locally. An estimated polynomial

  12. MIRD methodology. Part 2

    International Nuclear Information System (INIS)

    Gomez Parada, Ines

    2004-01-01

    This paper develops the MIRD (Medical Internal Radiation Dose) methodology for the evaluation of the internal dose due to the administration of radiopharmaceuticals. In this second part, different methods for the calculation of the accumulated activity are presented, together with the effective half life definition. Different forms of Retention Activity curves are also shown. (author)

  13. Interpreting forest and grassland biome productivity utilizing nested scales of image resolution and biogeographical analysis

    Science.gov (United States)

    Iverson, Louis R.; Cook, Elizabeth A.; Graham, Robin L.; Olson, Jerry S.; Frank, Thomas; Ke, Ying; Treworgy, Colin; Risser, Paul G.

    1987-01-01

    This report summarizes progress made in our investigation of forest productivity assessment using TM and other biogeographical data during the third six-month period of the grant. Data acquisition and methodology hurdles are largely complete. Four study areas for which the appropriate TM and ancillary data were available are currently being intensively analyzed. Significant relationships have been found on a site by site basis to suggest that forest productivity can be qualitatively assessed using TM band values and site characteristics. Perhaps the most promising results relate TM unsupervised classes to forest productivity, with enhancement from elevation data. During the final phases of the research, multi-temporal and regional comparisons of results will be addressed, as well as the predictability of forest productivity patterns over a large region using TM data and/or TM nested within AVHRR data.

  14. Improved clonality detection in Hodgkin lymphoma using a semi-nested modification of the BIOMED-2 PCR assay for IGH and IGK rearrangements: A paraffin-embedded tissue study.

    Science.gov (United States)

    Han, Shusen; Masaki, Ayako; Sakamoto, Yuma; Takino, Hisashi; Murase, Takayuki; Iida, Shinsuke; Inagaki, Hiroshi

    2018-05-01

    The BIOMED-2 PCR protocols targeting IGH and IGK genes may be useful for detecting clonality in Hodgkin lymphoma (HL). The clonality detection rates, however, have not been very high with these methods using paraffin-embedded tumor sections. We previously described the usefulness of the semi-nested BIOMED-2 IGH assay in B-cell malignancies. In this study, we devised a novel semi-nested BIOMED-2 IGK assay. Employing 58 cases of classical HL, we carried out the standard BIOMED-2, BIOMED-2 followed by BIOMED-2 re-amplification, and BIOMED-2 followed by semi-nested BIOMED-2, all targeting IGH and IGK, using paraffin-embedded tissues. In both IGH and IGK assays, semi-nested assays yielded significantly higher clonality detection rates than the standard assays and re-amplification assays. Clonality was detected in 13/58 (22.4%) classical HL cases using the standard IGH/IGK assays while it was detected in 38/58 (65.5%) cases using semi-nested IGH/IGK assays. The detection rates were not associated with the HL subtypes, CD30-positive cell density, CD20-positive cell density, or Epstein-Barr virus (EBV) positivity. In conclusion, tumor clonality was detected in nearly two-thirds of classical HL cases using semi-nested BIOMED-2 IGH/IGK assays using paraffin tumor sections. These semi-nested assays may be useful when the standard IGH/IGK assays fail to detect clonality in histopathologically suspected HLs. © 2018 Japanese Society of Pathology and John Wiley & Sons Australia, Ltd.

  15. Biome-Scale Forest Properties in Amazonia Based on Field and Satellite Observations

    Directory of Open Access Journals (Sweden)

    Liana O. Anderson

    2012-05-01

    Full Text Available Amazonian forests are extremely heterogeneous at different spatial scales. This review intends to present the large-scale patterns of the ecosystem properties of Amazonia, and focuses on two parts of the main components of the net primary production: the long-lived carbon pools (wood and short-lived pools (leaves. First, the focus is on forest biophysical properties, and secondly, on the macro-scale leaf phenological patterns of these forests, looking at field measurements and bringing into discussion the recent findings derived from remote sensing dataset. Finally, I discuss the results of the three major droughts that hit Amazonia in the last 15 years. The panorama that emerges from this review suggests that slow growing forests in central and eastern Amazonia, where soils are poorer, have significantly higher above ground biomass and higher wood density, trees are higher and present lower proportions of large-leaved species than stands in northwest and southwest Amazonia. However, the opposite pattern is observed in relation to forest productivity and dynamism, which is higher in western Amazonia than in central and eastern forests. The spatial patterns on leaf phenology across Amazonia are less marked. Field data from different forest formations showed that new leaf production can be unrelated to climate seasonality, timed with radiation, timed with rainfall and/or river levels. Oppositely, satellite images exhibited a large-scale synchronized peak in new leaf production during the dry season. Satellite data and field measurements bring contrasting results for the 2005 drought. Discussions on data processing and filtering, aerosols effects and a combined analysis with field and satellite images are presented. It is suggested that to improve the understanding of the large-scale patterns on Amazonian forests, integrative analyses that combine new technologies in remote sensing and long-term field ecological data are imperative.

  16. Using simulated annealing algorithm to optimize the parameters of Biome-BGC model%利用模拟退火算法优化Biome-BGC模型参数

    Institute of Scientific and Technical Information of China (English)

    张廷龙; 孙睿; 胡波; 冯丽超

    2011-01-01

    生态过程模型建立在明确的机理之上,能够较好地模拟陆地生态系统的行为和特征,但模型众多的参数,成为模型具体应用的瓶颈.本文以Biome-BGC模型为例,采用模拟退火算法,对其生理、生态参数进行优化.在优化过程中,先对待优化参数进行了选择,然后采取逐步优化的方法进行优化.结果表明,使用优化后的参数,模型模拟结果与实际观测更为接近,参数优化能有效地降低模型模拟的不确定性.文中参数优化的过程和方法,可为生态模型的参数识别和优化提供一种实例和思路,有助于生态模型应用区域的扩展.%Ecological process model based on defined mechanism can well simulate the dynamic behaviors and features of terrestrial ecosystem, but could become a bottleneck in application because of numerous parameters needed to be confirmed. In this paper, simulated annealing algorithm was used to optimize the physiological and ecological parameters of Biome-BGC model. The first step was to choose some of these parameters to optimize, and then, gradually optimized these parameters. By using the optimized parameters, the model simulation results were much more close to the observed data, and the parameter optimization could effectively reduce the uncertainty of model simulation. The parameter optimization method used in this paper could provide a case and an idea for the parameter identification and optimization of ecological process models,and also, help to expand the application area of the models.

  17. Soft Systems Methodology

    Science.gov (United States)

    Checkland, Peter; Poulter, John

    Soft systems methodology (SSM) is an approach for tackling problematical, messy situations of all kinds. It is an action-oriented process of inquiry into problematic situations in which users learn their way from finding out about the situation, to taking action to improve it. The learning emerges via an organised process in which the situation is explored using a set of models of purposeful action (each built to encapsulate a single worldview) as intellectual devices, or tools, to inform and structure discussion about a situation and how it might be improved. This paper, written by the original developer Peter Checkland and practitioner John Poulter, gives a clear and concise account of the approach that covers SSM's specific techniques, the learning cycle process of the methodology and the craft skills which practitioners develop. This concise but theoretically robust account nevertheless includes the fundamental concepts, techniques, core tenets described through a wide range of settings.

  18. Web survey methodology

    CERN Document Server

    Callegaro, Mario; Vehovar, Asja

    2015-01-01

    Web Survey Methodology guides the reader through the past fifteen years of research in web survey methodology. It both provides practical guidance on the latest techniques for collecting valid and reliable data and offers a comprehensive overview of research issues. Core topics from preparation to questionnaire design, recruitment testing to analysis and survey software are all covered in a systematic and insightful way. The reader will be exposed to key concepts and key findings in the literature, covering measurement, non-response, adjustments, paradata, and cost issues. The book also discusses the hottest research topics in survey research today, such as internet panels, virtual interviewing, mobile surveys and the integration with passive measurements, e-social sciences, mixed modes and business intelligence. The book is intended for students, practitioners, and researchers in fields such as survey and market research, psychological research, official statistics and customer satisfaction research.

  19. New species of Zygoclistron Rehn, 1905 (Insecta: Orthoptera: Acrididae: Copiocerinae) in the central corridor of the Atlantic Forest biome.

    Science.gov (United States)

    Silva, Daniela Santos Martins; Pereira, Marcelo Ribeiro; Domenico, Fernando Campos De; Sperber, Carlos Frankl

    2016-06-17

    Herein we describe a new species of Copiocerinae, Zygoclistron ruschii Silva n. sp., from Atlantic Forest remnants in southeastern Brazil, collected from the Reserva Biológica Augusto Ruschi in the Santa Teresa municipality, Espírito Santo state, Brazil. The diagnosis of this new species is based on phallic complex and terminalia characters.

  20. The ecology of the elephants in the Kasungu National Park, Malawi with specific reference to management of elephant populations in the Brachystegia biome of Southern Central Africa

    NARCIS (Netherlands)

    Jachmann, Hugo

    1984-01-01

    The elephant is one of the most important animals in African Wildlife Management, firstly because it is capable of modifying through cropping. The latter also makes it a prime poaching target. The main problems caused by elephant concern changes in the physiognomy of the habitat with its

  1. The ecology of the elephants in the Kasungu National Park, Malawi with specific reference to management of elephant populations in the Brachystegia biome of Southern Central Africa

    OpenAIRE

    Jachmann, Hugo

    1984-01-01

    The elephant is one of the most important animals in African Wildlife Management, firstly because it is capable of modifying through cropping. The latter also makes it a prime poaching target. The main problems caused by elephant concern changes in the physiognomy of the habitat with its consequences for the population itself and the diversity of plant and animal species in the conservation area. The Kasungu National Park suffers simultaneously from heavy illegal offtake and an elephant probl...

  2. Pricing methodologies and approaches

    International Nuclear Information System (INIS)

    Petrov, K.

    2002-01-01

    The following topics are dealt with: Role of regulatory control in the electric power market; Price regulation; Market monitoring; Quality of supply regulation; Regulatory challenges in Central and Eastern Europe. The findings of these questions are summarized in the Summary. (R.P.)

  3. Steganography: LSB Methodology

    Science.gov (United States)

    2012-08-02

    of LSB steganography in grayscale and color images . In J. Dittmann, K. Nahrstedt, and P. Wohlmacher, editors, Proceedings of the ACM, Special...Fridrich, M. Gojan and R. Du paper titled “Reliable detection of LSB steganography in grayscale and color images ”. From a general perspective Figure 2...REPORT Steganography : LSB Methodology (Progress Report) 14. ABSTRACT 16. SECURITY CLASSIFICATION OF: In computer science, steganography is the science

  4. Soil Radiological Characterisation Methodology

    International Nuclear Information System (INIS)

    Attiogbe, Julien; Aubonnet, Emilie; De Maquille, Laurence; De Moura, Patrick; Desnoyers, Yvon; Dubot, Didier; Feret, Bruno; Fichet, Pascal; Granier, Guy; Iooss, Bertrand; Nokhamzon, Jean-Guy; Ollivier Dehaye, Catherine; Pillette-Cousin, Lucien; Savary, Alain

    2014-12-01

    This report presents the general methodology and best practice approaches which combine proven existing techniques for sampling and characterisation to assess the contamination of soils prior to remediation. It is based on feedback of projects conducted by main French nuclear stakeholders involved in the field of remediation and dismantling (EDF, CEA, AREVA and IRSN). The application of this methodology will enable the project managers to obtain the elements necessary for the drawing up of files associated with remediation operations, as required by the regulatory authorities. It is applicable to each of the steps necessary for the piloting of remediation work-sites, depending on the objectives targeted (release into the public domain, re-use, etc.). The main part describes the applied statistical methodology with the exploratory analysis and variogram data, identification of singular points and their location. The results obtained permit assessment of a mapping to identify the contaminated surface and subsurface areas. It stakes the way for radiological site characterisation since the initial investigations from historical and functional analysis to check that the remediation objectives have been met. It follows an example application from the feedback of the remediation of a contaminated site on the Fontenay aux Roses facility. It is supplemented by a glossary of main terms used in the field from different publications or international standards. This technical report is a support of the ISO Standard ISO ISO/TC 85/SC 5 N 18557 'Sampling and characterisation principles for soils, buildings and infrastructures contaminated by radionuclides for remediation purposes'. (authors) [fr

  5. Fabricación y propiedades del carburo de silicio biomórfico: maderas cerámicas

    Directory of Open Access Journals (Sweden)

    Varela Feria, F. M.

    2002-08-01

    Full Text Available There is an increasing interest in the fabrication of materials with biomorphic microstructure. In particular, the fabrication of biomorphic ceramics would be of high interest because its high-temperature structural applications. The ceramics presented in this research were fabricated by the pyrolysis and infiltration with molten silicon of wood preforms. The final product is SiC with the same microstructure of the wood precursor. Wood is a natural composite that present an anisotropic porous microstructure with excellent elasticity, strength, and damage tolerance. Some of this properties will remain improved in the ceramic product. Biomorphic ceramics reach high strengths (700 MPa at 1150 oC for biomorphic SiC made from eucalyptus wood. The influence of the wood precursor and fabrication process in the mechanical and microstructural properties has been studied. The correlation microstructure-mechanical properties is discussed, as well as the application of the cellular theory of solids.

    En los últimos años se ha puesto de manifiesto un considerable interés en la fabricación y optimización de materiales de microestructura biomórfica. En particular, la fabricación de cerámicas biomórficas es especialmente importante ya que éstas pueden ser utilizadas en aplicaciones estructurales a temperaturas elevadas. Los materiales objeto de esta investigación se fabrican mediante la pirólisis e infiltración de silicio fundido en preformas de madera. El resultado final es SiC con la misma microestructura que la madera precursora. La madera es un material natural compuesto que presenta una morfología porosa anisotrópica con una excelente elasticidad, resistencia y tolerancia al daño; algunas de estas propiedades se trasladarán y amplificarán al pasar a la cerámica que se elabora a partir de la misma. Se ha estudiado la influencia de la madera seleccionada y el proceso de fabricación en las propiedades mecánicas y microestructurales

  6. Scaling net ecosystem production and net biome production over a heterogeneous region in the western United States

    Directory of Open Access Journals (Sweden)

    D. P. Turner

    2007-08-01

    Full Text Available Bottom-up scaling of net ecosystem production (NEP and net biome production (NBP was used to generate a carbon budget for a large heterogeneous region (the state of Oregon, 2.5×105 km2 in the western United States. Landsat resolution (30 m remote sensing provided the basis for mapping land cover and disturbance history, thus allowing us to account for all major fire and logging events over the last 30 years. For NEP, a 23-year record (1980–2002 of distributed meteorology (1 km resolution at the daily time step was used to drive a process-based carbon cycle model (Biome-BGC. For NBP, fire emissions were computed from remote sensing based estimates of area burned and our mapped biomass estimates. Our estimates for the contribution of logging and crop harvest removals to NBP were from the model simulations and were checked against public records of forest and crop harvesting. The predominately forested ecoregions within our study region had the highest NEP sinks, with ecoregion averages up to 197 gC m−2 yr−1. Agricultural ecoregions were also NEP sinks, reflecting the imbalance of NPP and decomposition of crop residues. For the period 1996–2000, mean NEP for the study area was 17.0 TgC yr−1, with strong interannual variation (SD of 10.6. The sum of forest harvest removals, crop removals, and direct fire emissions amounted to 63% of NEP, leaving a mean NBP of 6.1 TgC yr−1. Carbon sequestration was predominantly on public forestland, where the harvest rate has fallen dramatically in the recent years. Comparison of simulation results with estimates of carbon stocks, and changes in carbon stocks, based on forest inventory data showed generally good agreement. The carbon sequestered as NBP, plus accumulation of forest products in slow turnover pools, offset 51% of the annual emissions of fossil fuel CO2 for the state. State-level NBP dropped below zero in 2002

  7. Microestructura y propiedades mecánicas del SiC biomórfico obtenido a partir de eucalipto

    Directory of Open Access Journals (Sweden)

    Presas, M.

    2005-12-01

    Full Text Available The development of cellular ceramics with a biological structure, like bones and wood, has been a matter of interest in recent years. A low density highly interconnected structure, perfected by evolution, rises as the principal advantage of these materials. In the case of biomimetic SiC (biomorphic SiC, or bioSiC, the fabrication process technique is quite simple: a piece of wood is pyrolysed and is infiltrated with molten silicon after, the final product is a composite Si/SiC, which replicates the wood anisotropic microstructure This work focus on the mechanical properties of bioSiC fabricated using eucalyptus wood as precursor (hard wood with a bimodal channel distribution. It has been studied the mechanical behavior of this bioSiC (compression strength, flexure strength, fracture toughness and elastic modulus between 25 and 1350 oC. It is also discussed the relationship between mechanical behavior of the material and its microstructure.

    El desarrollo de materiales cerámicos con una estructura de tipo celular, similar a la del hueso o la madera, ha sido una cuestión que ha suscitado un gran interés en los últimos años. Su atractivo se debe al hecho de poseer una estructura porosa altamente interconectada de baja densidad, perfeccionada por la evolución. En el caso del SiC biomórfico (bio-SiC el proceso de fabricación es sencillo: se piroliza una pieza de madera y a continuación se inyecta con silicio líquido, el material así obtenido es un compuesto Si/SiC en el que el SiC mimetiza la estructura de la madera original. En este trabajo se estudian las propiedades mecánicas del SiC biomórfico fabricado a partir de eucalipto (madera dura con una distribución bimodal de poros. Se ha estudiado el comportamiento mecánico del mismo (resistencia a compresión, resistencia a flexión, tenacidad de fractura y módulo de elasticidad entre 25 y 1350 oC. Asimismo, se discute la relación entre el comportamiento mecánico del material y

  8. Biomechanical analysis of protective countermeasures in underride motor vehicle accidents - biomed 2009.

    Science.gov (United States)

    Kumar, Sri; Enz, Bruce; Ponder, Perry L; Anderson, Bob

    2009-01-01

    Traffic safety has been significantly improved over the past several decades reducing injury and fatality rates. However, there is a paucity of research effort to address the safety issues in underride accidents, specifically the side underride crashes. It is well known that the compromise of occupant space in the vehicle leads to a higher probability of serious or fatal injuries. A better understanding of occupant protection and mechanism of injuries involved in side underride accidents assists in the advancement of safety measures. The present work evaluates the injury potential to occupants during side underride crashes using the car-to-trailer crash methodology. Four crash tests were conducted into the side of a stationary trailer fitted with the side underride guard system (SURG). The SURG used in these tests is 25% lighter than the previous design. A 5th percentile hybrid III female dummy was placed in the driver seat and restrained with the three-point lap and shoulder harness. The anthropometric dummy was instrumented with a head triaxial accelerometer, a chest triaxal accelerometer, a load cell to measure neck force and moment, and a load cell to measure the femur force. The vehicle acceleration was measured using a traxial accelerometer in the rear center tunnel. High speed, standard video and still photos were taken. In all tests, the intrusion was limited to the front structure of the vehicle without any significant compromise to the occupant space. Results indicate that the resultant head and chest accelerations, head injury criterion (HIC), neck force and moment, and femur force were well below the injury tolerance. The present findings support the hypothesis that the SURG not only limits or eliminates the intrusion into the occupant space but also results in biomechanical injury values well below the tolerance limit in motor vehicle crashes.

  9. Methodology applied to develop the DHIE: applied methodology

    CSIR Research Space (South Africa)

    Herselman, Marlien

    2016-12-01

    Full Text Available This section will address the methodology that was applied to develop the South African Digital Health Innovation Ecosystem (DHIE). Each chapter under Section B represents a specific phase in the methodology....

  10. [Qualitative research methodology in health care].

    Science.gov (United States)

    Bedregal, Paula; Besoain, Carolina; Reinoso, Alejandro; Zubarew, Tamara

    2017-03-01

    Health care research requires different methodological approaches such as qualitative and quantitative analyzes to understand the phenomena under study. Qualitative research is usually the least considered. Central elements of the qualitative method are that the object of study is constituted by perceptions, emotions and beliefs, non-random sampling by purpose, circular process of knowledge construction, and methodological rigor throughout the research process, from quality design to the consistency of results. The objective of this work is to contribute to the methodological knowledge about qualitative research in health services, based on the implementation of the study, “The transition process from pediatric to adult services: perspectives from adolescents with chronic diseases, caregivers and health professionals”. The information gathered through the qualitative methodology facilitated the understanding of critical points, barriers and facilitators of the transition process of adolescents with chronic diseases, considering the perspective of users and the health team. This study allowed the design of a transition services model from pediatric to adult health services based on the needs of adolescents with chronic diseases, their caregivers and the health team.

  11. Testing the applicability of BIOME-BGC to simulate beech gross primary production in Europe using a new continental weather dataset

    DEFF Research Database (Denmark)

    Chiesi, Marta; Chirici, Gherardo; Marchetti, Marco

    2016-01-01

    A daily 1-km Pan-European weather dataset can drive the BIOME-BGC model for the estimation of current and future beech gross primary production (GPP). Annual beech GPP is affected primarily by spring temperature and more irregularly by summer water stress.The spread of beech forests in Europe...... forest ecosystems having different climatic conditions where the eddy covariance technique is used to measure water and carbon fluxes. The experiment is in three main steps. First, the accuracy of BIOME-BGC GPP simulations is assessed through comparison with flux observations. Second, the influence...... of two major meteorological drivers (spring minimum temperature and growing season dryness) on observed and simulated inter-annual GPP variations is analysed. Lastly, the impacts of two climate change scenarios on beech GPP are evaluated through statistical analyses of the ground data and model...

  12. A Study on the Quality and Identity of Brazilian Pampa Biome Honey: Evidences for Its Beneficial Effects against Oxidative Stress and Hyperglycemia

    Directory of Open Access Journals (Sweden)

    L. C. Cruz

    2014-01-01

    Full Text Available We characterized, for the first time, the quality and identity of Brazilian Pampa biome honey and its antioxidant properties in vitro (FRAP, DDPH and ABTS. The potential protective effect of honey against oxidative stress induced by iron (Fe and paraquat, (PQ in a Drosophila melanogaster model (in vivo was also tested. The results indicated that all honey samples tested showed antioxidant activity in vitro. Flies treated with honey showed increased lifespan and were protected against oxidative stress induced by Fe and PQ. Despite the high concentration of sugars in honey (approximately 70–80%, our results demonstrate a hypoglycemic-like effect of honey in Drosophila. Thus, this study demonstrates the high quality of Brazilian Pampa biome honey as well as its significant antioxidant activity in vitro and in vivo, pointing to the potential use of this natural product as an alternative in the therapy of oxidative stress-associated diseases.

  13. A Study on the Quality and Identity of Brazilian Pampa Biome Honey: Evidences for Its Beneficial Effects against Oxidative Stress and Hyperglycemia.

    Science.gov (United States)

    Cruz, L C; Batista, J E S; Zemolin, A P P; Nunes, M E M; Lippert, D B; Royes, L F F; Soares, F A; Pereira, A B; Posser, T; Franco, J L

    2014-01-01

    We characterized, for the first time, the quality and identity of Brazilian Pampa biome honey and its antioxidant properties in vitro (FRAP, DDPH and ABTS). The potential protective effect of honey against oxidative stress induced by iron (Fe) and paraquat, (PQ) in a Drosophila melanogaster model (in vivo) was also tested. The results indicated that all honey samples tested showed antioxidant activity in vitro. Flies treated with honey showed increased lifespan and were protected against oxidative stress induced by Fe and PQ. Despite the high concentration of sugars in honey (approximately 70-80%), our results demonstrate a hypoglycemic-like effect of honey in Drosophila. Thus, this study demonstrates the high quality of Brazilian Pampa biome honey as well as its significant antioxidant activity in vitro and in vivo, pointing to the potential use of this natural product as an alternative in the therapy of oxidative stress-associated diseases.

  14. A methodology for Electric Power Load Forecasting

    Directory of Open Access Journals (Sweden)

    Eisa Almeshaiei

    2011-06-01

    Full Text Available Electricity demand forecasting is a central and integral process for planning periodical operations and facility expansion in the electricity sector. Demand pattern is almost very complex due to the deregulation of energy markets. Therefore, finding an appropriate forecasting model for a specific electricity network is not an easy task. Although many forecasting methods were developed, none can be generalized for all demand patterns. Therefore, this paper presents a pragmatic methodology that can be used as a guide to construct Electric Power Load Forecasting models. This methodology is mainly based on decomposition and segmentation of the load time series. Several statistical analyses are involved to study the load features and forecasting precision such as moving average and probability plots of load noise. Real daily load data from Kuwaiti electric network are used as a case study. Some results are reported to guide forecasting future needs of this network.

  15. Research Methodologies in Supply Chain Management

    DEFF Research Database (Denmark)

    Kotzab, Herbert

    . Within the 36 chapters 70 authors bring together a rich selection of theoretical and practical examples of how research methodologies are applied in supply chain management. The book contains papers on theoretical implications as well as papers on a range of key methods, such as modelling, surveys, case...... studies or action research. It will be of great interest to researchers in the area of supply chain management and logistics, but also to neighbouring fields, such as network management or global operations.......While supply chain management has risen to great prominence in recent year, there are hardly related developments in research methodologies. Yet, as supply chains cover more than one company, one central issue is how to collect and analyse data along the whole or relevant part of the supply chain...

  16. Case Study Research Methodology

    Directory of Open Access Journals (Sweden)

    Mark Widdowson

    2011-01-01

    Full Text Available Commenting on the lack of case studies published in modern psychotherapy publications, the author reviews the strengths of case study methodology and responds to common criticisms, before providing a summary of types of case studies including clinical, experimental and naturalistic. Suggestions are included for developing systematic case studies and brief descriptions are given of a range of research resources relating to outcome and process measures. Examples of a pragmatic case study design and a hermeneutic single-case efficacy design are given and the paper concludes with some ethical considerations and an exhortation to the TA community to engage more widely in case study research.

  17. Sample size methodology

    CERN Document Server

    Desu, M M

    2012-01-01

    One of the most important problems in designing an experiment or a survey is sample size determination and this book presents the currently available methodology. It includes both random sampling from standard probability distributions and from finite populations. Also discussed is sample size determination for estimating parameters in a Bayesian setting by considering the posterior distribution of the parameter and specifying the necessary requirements. The determination of the sample size is considered for ranking and selection problems as well as for the design of clinical trials. Appropria

  18. Geotechnical site assessment methodology

    International Nuclear Information System (INIS)

    Tunbridge, L.W.; Richards, L.R.

    1985-09-01

    The reports comprising this volume concern the research conducted on geotechnical site assessment methodology at the Carwynnen test mine in granites in Cornwall, with particular reference to the effect of structures imposed by discontinuities on the engineering behaviour of rock masses. The topics covered are: in-situ stress measurements using (a) the hydraulic fracturing method, or (b) the US Bureau of Mines deformation probe; scanline discontinuity survey - coding form and instructions, and data; applicability of geostatistical estimation methods to scalar rock properties; comments on in-situ stress at the Carwynnen test mine and the state of stress in the British Isles. (U.K.)

  19. Microphysics evolution and methodology

    International Nuclear Information System (INIS)

    Dionisio, J.S.

    1990-01-01

    A few general features of microscopics evolution and their relationship with microscopics methodology are briefly surveyed. Several pluri-disciplinary and interdisciplinary aspects of microscopics research are also discussed in the present scientific context. The need for an equilibrium between individual tendencies and collective constraints required by team work, already formulated thirty years ago by Frederic Joliot, is particularly stressed in the present conjuncture of Nuclear Research favouring very large team projects and discouraging individual initiatives. The increasing importance of the science of science (due to their multiple social, economical, ecological aspects) and the stronger competition between national and international tendencies of scientific (and technical) cooperation are also discussed. (author)

  20. MIRD methodology; Metodologia MIRD

    Energy Technology Data Exchange (ETDEWEB)

    Rojo, Ana M [Autoridad Regulatoria Nuclear, Buenos Aires (Argentina); Gomez Parada, Ines [Sociedad Argentina de Radioproteccion, Buenos Aires (Argentina)

    2004-07-01

    The MIRD (Medical Internal Radiation Dose) system was established by the Society of Nuclear Medicine of USA in 1960 to assist the medical community in the estimation of the dose in organs and tissues due to the incorporation of radioactive materials. Since then, 'MIRD Dose Estimate Report' (from the 1 to 12) and 'Pamphlets', of great utility for the dose calculations, were published. The MIRD system was planned essentially for the calculation of doses received by the patients during nuclear medicine diagnostic procedures. The MIRD methodology for the absorbed doses calculations in different tissues is explained.

  1. Beam optimization: improving methodology

    International Nuclear Information System (INIS)

    Quinteiro, Guillermo F.

    2004-01-01

    Different optimization techniques commonly used in biology and food technology allow a systematic and complete analysis of response functions. In spite of the great interest in medical and nuclear physics in the problem of optimizing mixed beams, little attention has been given to sophisticate mathematical tools. Indeed, many techniques are perfectly suited to the typical problem of beam optimization. This article is intended as a guide to the use of two methods, namely Response Surface Methodology and Simplex, that are expected to fasten the optimization process and, meanwhile give more insight into the relationships among the dependent variables controlling the response

  2. Literacy research methodologies

    CERN Document Server

    Duke, Nell K

    2012-01-01

    The definitive reference on literacy research methods, this book serves as a key resource for researchers and as a text in graduate-level courses. Distinguished scholars clearly describe established and emerging methodologies, discuss the types of questions and claims for which each is best suited, identify standards of quality, and present exemplary studies that illustrate the approaches at their best. The book demonstrates how each mode of inquiry can yield unique insights into literacy learning and teaching and how the methods can work together to move the field forward.   New to This Editi

  3. Methodology of site studies

    International Nuclear Information System (INIS)

    Caries, J.C.; Hugon, J.; Grauby, A.

    1980-01-01

    This methodology consists in an essentially dynamic, estimated and follow-up analysis of the impact of discharges on all the environment compartments, whether natural or not, that play a part in the protection of man and his environment. It applies at two levels, to wit: the choice of site, or the detailed study of the site selected. Two examples of its application will be developed, namely: at the choice of site level in the case of marine sites, and of the detailed study level of the chosen site in that of a riverside site [fr

  4. Alternative pricing methodologies

    International Nuclear Information System (INIS)

    Anon.

    1991-01-01

    With the increased interest in competitive market forces and growing recognition of the deficiencies in current practices, FERC and others are exploring alternatives to embedded cost pricing. A number of these alternatives are discussed in this chapter. Marketplace pricing, discussed briefly here, is the subject of the next chapter. Obviously, the pricing formula may combine several of these methodologies. One utility of which the authors are aware is seeking a price equal to the sum of embedded costs, opportunity costs, line losses, value of service, FERC's percentage adder formula and a contract service charge

  5. The genetic structure of the mountain forest butterfly Erebia euryale unravels the late Pleistocene and postglacial history of the mountain coniferous forest biome in Europe.

    Science.gov (United States)

    Schmitt, Thomas; Haubrich, Karola

    2008-05-01

    The distribution of the mountain coniferous forest biome in Europe throughout time is not sufficiently understood. One character species of this habitat type is the large ringlet, Erebia euryale well reflecting the extension of this biome today, and the genetic differentiation of this species among and within mountain systems may unravel the late Pleistocene history of this habitat type. We therefore analysed the allozyme pattern of 381 E. euryale individuals from 11 populations in four different European mountain systems (Pyrenees, Alps, Carpathians, Rila). All loci analysed were polymorphic. The mean F(ST) over all samples was high (20%). Furthermore, the mean genetic distance among samples was quite high (0.049). We found four different groups well supported by cluster analyses, bootstraps and hierarchical variance analyses: Pyrenees, western Alps, eastern Alps and southeastern Europe (Carpathians and Rila). The genetic diversity of the populations was highest in the southeastern European group and stepwise decreased westwards. Interestingly, the populations from Bulgaria and Romania were almost identical; therefore, we assume that they were not separated by the Danube Valley, at least during the last ice age. On the contrary, the differentiation among the three western Alps populations was considerable. For all these reasons, we assume that (i) the most important refugial area for the coniferous mountain forest biome in Europe has been located in southeastern Europe including at least parts of the Carpathians and the Bulgarian mountains; (ii) important refugial areas for this biome existed at the southeastern edge of the Alps; (iii) fragments of this habitat types survived along the southwestern Alps, but in a more scattered distribution; and (iv) relatively small relicts have persisted somewhere at the foothills of the Pyrenees.

  6. Testing the applicability of BIOME-BGC to simulate beech gross primary production in Europe using a new continental weather dataset

    OpenAIRE

    Chiesi , Marta; Chirici , Gherardo; Marchetti , Marco; Hasenauer , Hubert; Moreno , Adam; Knohl , Alexander; Matteucci , Giorgio; Pilegaard , Kim; Granier , André; Longdoz , Bernard; Maselli , Fabio

    2016-01-01

    Key message A daily 1-km Pan-European weather dataset can drive the BIOME-BGC model for the estimation of current and future beech gross primary production (GPP). Annual beech GPP is affected primarily by spring temperature and more irregularly by summer water stress. [br/] Context The spread of beech forests in Europe enhances the importance of modelling and monitoring their growth in view of ongoing climate changes. [br/] Aims The current paper assesses the capability o...

  7. Relationships of leaf dark respiration to leaf nitrogen, specific leaf area and leaf life-span: a test across biomes and functional groups.

    Science.gov (United States)

    Reich, Peter B; Walters, Michael B; Ellsworth, David S; Vose, James M; Volin, John C; Gresham, Charles; Bowman, William D

    1998-05-01

    Based on prior evidence of coordinated multiple leaf trait scaling, we hypothesized that variation among species in leaf dark respiration rate (R d ) should scale with variation in traits such as leaf nitrogen (N), leaf life-span, specific leaf area (SLA), and net photosynthetic capacity (A max ). However, it is not known whether such scaling, if it exists, is similar among disparate biomes and plant functional types. We tested this idea by examining the interspecific relationships between R d measured at a standard temperature and leaf life-span, N, SLA and A max for 69 species from four functional groups (forbs, broad-leafed trees and shrubs, and needle-leafed conifers) in six biomes traversing the Americas: alpine tundra/subalpine forest, Colorado; cold temperate forest/grassland, Wisconsin; cool temperate forest, North Carolina; desert/shrubland, New Mexico; subtropical forest, South Carolina; and tropical rain forest, Amazonas, Venezuela. Area-based R d was positively related to area-based leaf N within functional groups and for all species pooled, but not when comparing among species within any site. At all sites, mass-based R d (R d-mass ) decreased sharply with increasing leaf life-span and was positively related to SLA and mass-based A max and leaf N (leaf N mass ). These intra-biome relationships were similar in shape and slope among sites, where in each case we compared species belonging to different plant functional groups. Significant R d-mass -N mass relationships were observed in all functional groups (pooled across sites), but the relationships differed, with higher R d at any given leaf N in functional groups (such as forbs) with higher SLA and shorter leaf life-span. Regardless of biome or functional group, R d-mass was well predicted by all combinations of leaf life-span, N mass and/or SLA (r 2 ≥ 0.79, P morphological, chemical and metabolic traits.

  8. ¿Cómo cambiar hacia sociedades sostenibles? Reflexiones sobre biomímesis y autolimitación

    Directory of Open Access Journals (Sweden)

    Riechmann, Jorge

    2005-06-01

    Full Text Available We live in socio-economical systems which are too large in relation to the biosphere which contains them, on the one hand, and on the other, we live in badly adapted systems, that is, human systems not well fitted into the natural ecosystems. The scale problem calls for a move toward self-limitation by human societies, which (in terms of political economy could be thought of as global demand management; the structural problem demands a reconstruction of the technosphere according to biomimicry principIes.

    Vivimos dentro de sistemas socioeconámicos humanos demasiado grandes en relación con la biosfera que los contiene, por una parte; y sistemas mal adaptados, sistemas humanos que encajan mal en los ecosistemas naturales. El problema de escala reclama un movimiento de autolimitación por parte de las sociedades humanas, que podríamos concebir (en términos de economía política bajo la idea de gestión global de la demanda; el problema de estructura exige una reconstrucción de la tecnosfera de acuerdo con principios de biomímesis.

  9. The contrasting nature of woody plant species in different neotropical forest biomes reflects differences in ecological stability.

    Science.gov (United States)

    Pennington, R Toby; Lavin, Matt

    2016-04-01

    A fundamental premise of this review is that distinctive phylogenetic and biogeographic patterns in clades endemic to different major biomes illuminate the evolutionary process. In seasonally dry tropical forests (SDTFs), phylogenies are geographically structured and multiple individuals representing single species coalesce. This pattern of monophyletic species, coupled with their old species stem ages, is indicative of maintenance of small effective population sizes over evolutionary timescales, which suggests that SDTF is difficult to immigrate into because of persistent resident lineages adapted to a stable, seasonally dry ecology. By contrast, lack of coalescence in conspecific accessions of abundant and often widespread species is more frequent in rain forests and is likely to reflect large effective population sizes maintained over huge areas by effective seed and pollen flow. Species nonmonophyly, young species stem ages and lack of geographical structure in rain forest phylogenies may reflect more widespread disturbance by drought and landscape evolution causing resident mortality that opens up greater opportunities for immigration and speciation. We recommend full species sampling and inclusion of multiple accessions representing individual species in phylogenies to highlight nonmonophyletic species, which we predict will be frequent in rain forest and savanna, and which represent excellent case studies of incipient speciation. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  10. Estimating Trends and Variation of Net Biome Productivity in India for 1980-2012 Using a Land Surface Model

    Science.gov (United States)

    Gahlot, Shilpa; Shu, Shijie; Jain, Atul K.; Baidya Roy, Somnath

    2017-11-01

    In this paper we explore the trend in net biome productivity (NBP) over India for the period 1980-2012 and quantify the impact of different environmental factors, including atmospheric CO2 concentrations ([CO2]), land use and land cover change, climate, and nitrogen deposition on carbon fluxes using a land surface model, Integrated Science Assessment Model. Results show that terrestrial ecosystems of India have been a carbon sink for this period. Driven by a strong CO2 fertilization effect, magnitude of NBP increased from 27.17 TgC/yr in the 1980s to 34.39 TgC/yr in the 1990s but decreased to 23.70 TgC/yr in the 2000s due to change in climate. Adoption of forest conservation, management, and reforestation policies in the past decade has promoted carbon sequestration in the ecosystems, but this effect has been offset by loss of carbon from ecosystems due to rising temperatures and decrease in precipitation.

  11. Understanding the Effect of Land Cover Classification on Model Estimates of Regional Carbon Cycling in the Boreal Forest Biome

    Science.gov (United States)

    Kimball, John; Kang, Sinkyu

    2003-01-01

    The original objectives of this proposed 3-year project were to: 1) quantify the respective contributions of land cover and disturbance (i.e., wild fire) to uncertainty associated with regional carbon source/sink estimates produced by a variety of boreal ecosystem models; 2) identify the model processes responsible for differences in simulated carbon source/sink patterns for the boreal forest; 3) validate model outputs using tower and field- based estimates of NEP and NPP; and 4) recommend/prioritize improvements to boreal ecosystem carbon models, which will better constrain regional source/sink estimates for atmospheric C02. These original objectives were subsequently distilled to fit within the constraints of a 1 -year study. This revised study involved a regional model intercomparison over the BOREAS study region involving Biome-BGC, and TEM (A.D. McGuire, UAF) ecosystem models. The major focus of these revised activities involved quantifying the sensitivity of regional model predictions associated with land cover classification uncertainties. We also evaluated the individual and combined effects of historical fire activity, historical atmospheric CO2 concentrations, and climate change on carbon and water flux simulations within the BOREAS study region.

  12. Estudio biométrico ocular en una población adulta del estado de Sinaloa

    Directory of Open Access Journals (Sweden)

    Juliana Marcela Morales Avalos

    2016-01-01

    Resultados: Se incluyeron 304 ojos con un rango de edad de 29-98 años con una media de 68 años. La distribución por género fue del 53.94% (164 ojos para el género femenino y del 46.05% (140 ojos para el género masculino. El 51.31% (156 ojos fueron derechos y el 48.68% (148 ojos fueron izquierdo. Los resultados de los valores biométricos fueron: profundidad de cámara anterior, rango 2.39-4.6 con promedio de 3.14 mm; espesor de cristalino, rango 2.49-5.42 con promedio de 3.65 mm; profundidad de cámara vítrea, rango de 13.69-19.59 con promedio de 16.28 mm; y la longitud anteroposterior con rango 20.18-27.3 con promedio de 23.09 mm; el promedio del poder dióptrico deseado para emetropía del lente intraocular es de 22.40 dioptrías.

  13. Application of a rule-based model to estimate mercury exchange for three background biomes in the continental United States

    Science.gov (United States)

    Hartman, J.S.; Weisberg, P.J.; Pillai, R.; Ericksen, J.A.; Kuiken, T.; Lindberg, S.E.; Zhang, H.; Rytuba, J.J.; Gustin, M.S.

    2009-01-01

    Ecosystems that have low mercury (Hg) concentrations (i.e., not enriched or impactedbygeologic or anthropogenic processes) cover most of the terrestrial surface area of the earth yet their role as a net source or sink for atmospheric Hg is uncertain. Here we use empirical data to develop a rule-based model implemented within a geographic information system framework to estimate the spatial and temporal patterns of Hg flux for semiarid deserts, grasslands, and deciduous forests representing 45% of the continental United States. This exercise provides an indication of whether these ecosystems are a net source or sink for atmospheric Hg as well as a basis for recommendation of data to collect in future field sampling campaigns. Results indicated that soil alone was a small net source of atmospheric Hg and that emitted Hg could be accounted for based on Hg input by wet deposition. When foliar assimilation and wet deposition are added to the area estimate of soil Hg flux these biomes are a sink for atmospheric Hg. ?? 2009 American Chemical Society.

  14. Woodland expansion in South African grassy biomes based on satellite observations (1990-2013): general patterns and potential drivers.

    Science.gov (United States)

    Skowno, Andrew L; Thompson, Mark W; Hiestermann, Jens; Ripley, Brad; West, Adam G; Bond, William J

    2017-06-01

    Increases in woody plant cover in savanna grassland environments have been reported on globally for over 50 years and are generally perceived as a threat to rangeland productivity and biodiversity. Despite this, few attempts have been made to estimate the extent of woodland increase at a national scale, principally due to technical constraints such as availability of appropriate remote sensing products. In this study, we aimed to measure the extent to which woodlands have replaced grasslands in South Africa's grassy biomes. We use multiseason Landsat data in conjunction with satellite L-band radar backscatter data to estimate the extent of woodlands and grasslands in 1990 and 2013. The method employed allows for a unique, nationwide measurement of transitions between grassland and woodland classes in recent decades. We estimate that during the 23-year study period, woodlands have replaced grasslands over ~57 000 km 2 and conversely that grasslands have replaced woodlands over ~30 000 km 2 , a net increase in the extent of woodland of ~27 000 km 2 and an annual increase of 0.22%. The changes varied markedly across the country; areas receiving over 500 mm mean annual precipitation showed higher rates of woodland expansion than regions receiving 0.19% yr -1 ). The woodland change map presented here provides a unique opportunity to test the numerous models of woody plant encroachment at a national/regional scale. © 2016 John Wiley & Sons Ltd.

  15. Produtividade e características biométricas do capim-braquiária em sistema silvipastoril

    Directory of Open Access Journals (Sweden)

    Cristiam Bosi

    2014-06-01

    Full Text Available O objetivo deste trabalho foi avaliar a produtividade e as características biométricas do capim-braquiária (Urochloa decumbens sob pastejo, em sistema silvipastoril. Avaliou-se um sistema com árvores nativas de interesse comercial, plantadas em renques, no sentido norte-sul, espaçados por 17 m. Utilizou-se o delineamento experimental de blocos ao acaso, com quatro repetições e parcelas subdivididas, tendo-se avaliado o ciclo de rebrota da forragem nas parcelas, e a distância desta em relação aos renques, nas subparcelas. Sete ciclos de rebrota foram avaliados, em quatro distâncias dos renques: a 2 e a 6 m do renque leste, e a 2 e a 6 m do renque oeste. Quantificou-se a produtividade de matéria seca, o índice de área foliar (IAF, a área foliar específica (AFE e a altura das plantas. A produtividade de forragem, nos dois primeiros ciclos, e o IAF, no segundo e no terceiro ciclo, diminuiram com níveis de sombra acima de 39 e 40%, respectivamente. Já a altura de plantas aumentou com sombreamentos superiores a 53%, nos quatro primeiros ciclos; o que também ocorreu com a AFE, com sombreamento superior a 66%, nos três primeiros ciclos.

  16. Explore inhabitants’ perceptions of wildfire and mitigation behaviours in the Cerrado biome, a fire-prone area of Brazil

    Directory of Open Access Journals (Sweden)

    Giovanni Santopuoli

    2017-05-01

    Full Text Available Fire represents an important natural feature of Brazilian landscape, especially in the Cerrado biome. The Cerrado is the economic livelihood of thousands of people from rural areas in Brazil. It is one of the most important hotspot of biodiversity in the world but also it is a fire-prone area thanks to the high flammability index of the vegetation. Residents and native people of this environment use fire very frequently. The majority of wildfires are caused by humans, though there are some aggravating natural factors affecting the risk, intensity and severity of wildfires. Since residents are continuously involved in fire suppression activities, understanding their perceptions is important for the decision makers who must assess the local capacity to preserve natural resources. This study explores perceptions about wildfire risk and fire mitigation behaviors within three municipalities of the state of Tocantins (Brazil. The study demonstrates that survey participants perceived wildfire risk as rather high, although the perceptions were complex and conflicting among interviewees. A wide range of confused perceptions about fire ignition and heterogeneous point of view have carried out form the survey. However, the residence of interviewees and their educational attainment result the variables that significantly (p-value <0.05 affect the inhabitants’ perceptions.

  17. Governing and Delivering a Biome-Wide Restoration Initiative: The Case of Atlantic Forest Restoration Pact in Brazil

    Directory of Open Access Journals (Sweden)

    Severino R. Pinto

    2014-09-01

    Full Text Available In many human-modified tropical landscapes, biodiversity conservation and the provision of ecosystem services require large-scale restoration initiatives. Such initiatives must be able to augment the amount and the quality of remaining natural habitats. There is thus a growing need for long-term, multi-stakeholder and multi-purpose initiatives that result in multiple ecological and socioeconomic benefits at the biome scale. The Atlantic Forest Restoration Pact (AFRP is a coalition of 260+ stakeholders, including governmental agencies, private sector, NGOs and research institutions, aimed at restoring 15 million ha of degraded and deforested lands by 2050. By articulating, and then integrating common interests, this initiative has allowed different sectors of society to implement an ambitious vision and create a forum for public and private concerns regarding forest restoration. The AFRP adopts a set of governance tools so multiple actors can implement key processes to achieve long-term and visionary restoration goals. Having overcome some initial challenges, AFRP now has to incorporate underrepresented stakeholders and enhance its efforts to make forest restoration more economically viable, including cases where restoration could be less expensive and profitable. The AFRP experience has resulted in many lessons learned, which can be shared to foster similar initiatives across tropical regions.

  18. The southern Brazilian grassland biome: soil carbon stocks, fluxes of greenhouse gases and some options for mitigation.

    Science.gov (United States)

    Pillar, V D; Tornquist, C G; Bayer, C

    2012-08-01

    The southern Brazilian grassland biome contains highly diverse natural ecosystems that have been used for centuries for grazing livestock and that also provide other important environmental services. Here we outline the main factors controlling ecosystem processes, review and discuss the available data on soil carbon stocks and greenhouse gases emissions from soils, and suggest opportunities for mitigation of climatic change. The research on carbon and greenhouse gases emissions in these ecosystems is recent and the results are still fragmented. The available data indicate that the southern Brazilian natural grassland ecosystems under adequate management contain important stocks of organic carbon in the soil, and therefore their conservation is relevant for the mitigation of climate change. Furthermore, these ecosystems show a great and rapid loss of soil organic carbon when converted to crops based on conventional tillage practices. However, in the already converted areas there is potential to mitigate greenhouse gas emissions by using cropping systems based on no soil tillage and cover-crops, and the effect is mainly related to the potential of these crop systems to accumulate soil organic carbon in the soil at rates that surpass the increased soil nitrous oxide emissions. Further modelling with these results associated with geographic information systems could generate regional estimates of carbon balance.

  19. Dinámicas TIC en educación biomédica y odontológica

    Directory of Open Access Journals (Sweden)

    Gleyvis Coro Montanet

    2015-12-01

    Full Text Available Ensayo que aborda un espectro de propuestas de nuevas tecnológicas aplicables en el ámbito de la enseñanza biomédica de mayor implicación operatoria, con especificidad en la rama odontológica. Después de un breve repaso de los elementos que han dificultado la inserción de las TIC en las academias médicas, el trabajo ofrece variedad de estrategias para gestionar el cambio y la mejora a través de la aplicación de tecnologías, con apoyo en evidencias de éxito y dependientes de la estrecha relación de lo tecnológico con un modelo educativo -de simulación preclínica y ejercitación teórico/práctica- dinámico y flexible. Todo refrendado por un proyecto de innovación, con base en la investigación-acción, llevado a cabo en la titulación de Odontología de la Universidad Europea de Madrid, que concluye con el aporte de buenas prácticas y una prospectiva de considerable desarrollo a corto y largo plazo. DOI: 10.18870/hlrc.v5i4.290

  20. Caracterización de la superaleación ODS MA 956 para aplicaciones biomédicas

    Directory of Open Access Journals (Sweden)

    Escudero, M. I.

    1998-05-01

    Full Text Available Since the MA 956 was proposed as a possible new biomaterial due to its good corrosion resistance values in physiological fluids a long way, still not finished, has been done. An exhaustive characterization of this alloy at room temperature has been developed. The technological objectives are well established: the possible use of this material for biomedical applications as hip or knee prostheses and as dental implants. The study was performed comparing the results of this alloy with the materials used nowadays as surgical implants, i.e., titanium alloys and polyethylene.

    Desde que la MA 956 fue propuesta como posible nuevo biomaterial en base a su buena resistencia a la corrosión frente a sueros fisiológicos, un largo camino, aún sin finalizar, se ha recorrido, en el que se ha llevado a cabo una caracterización exhaustiva de esta aleación a temperatura ambiente con fines tecnológicos bien definidos: su posible uso en aplicaciones biomédicas, bien sea como prótesis de cadera o de rodilla y para implantes dentales. Los estudios se han llevado a cabo comparando esta aleación con los materiales más comúnmente utilizados en implantes ortopédicos como aleaciones de titanio y polietileno.

  1. Shifts in functional traits elevate risk of fire-driven tree dieback in tropical savanna and forest biomes.

    Science.gov (United States)

    Pellegrini, Adam F A; Franco, Augusto C; Hoffmann, William A

    2016-03-01

    Numerous predictions indicate rising CO2 will accelerate the expansion of forests into savannas. Although encroaching forests can sequester carbon over the short term, increased fires and drought-fire interactions could offset carbon gains, which may be amplified by the shift toward forest plant communities more susceptible to fire-driven dieback. We quantify how bark thickness determines the ability of individual tree species to tolerate fire and subsequently determine the fire sensitivity of ecosystem carbon across 180 plots in savannas and forests throughout the 2.2-million km(2) Cerrado region in Brazil. We find that not accounting for variation in bark thickness across tree species underestimated carbon losses in forests by ~50%, totaling 0.22 PgC across the Cerrado region. The lower bark thicknesses of plant species in forests decreased fire tolerance to such an extent that a third of carbon gains during forest encroachment may be at risk of dieback if burned. These results illustrate that consideration of trait-based differences in fire tolerance is critical for determining the climate-carbon-fire feedback in tropical savanna and forest biomes. © 2015 John Wiley & Sons Ltd.

  2. Design and standardization of PCR primers and protocols for detection of clonal immunoglobulin and T-cell receptor gene recombinations in suspect lymphoproliferations: Report of the BIOMED-2 Concerted Action BMH4-CT98-3936 : Report of the BIOMED-2 Concerted Action BMH4-CT98-3936

    NARCIS (Netherlands)

    van Dongen, J.J.M.; Langerak, A.W.; Bruggemann, M.; Evans, P.A.S.; Hummel, M.; Lavender, F.L.; Delabesse, E.; Davi, F.; Schuuring, E.; Garcia-Sanz, R.; Van Krieken, J.H.J.M.; Droese, J.; Gonzalez, D.; Bastard, C.; White, H.E.; Spaargaren, M.; Gonzalez, M.; Parreira, A.; Smith, J.L.; Morgan, G.J.; Kneba, M.; Macintyre, E.A.

    2003-01-01

    In a European BIOMED-2 collaborative study, multiplex PCR assays have successfully been developed and standardized for the detection of clonally rearranged immunoglobulin (Ig) and T-cell receptor (TCR) genes and the chromosome aberrations t(11; 14) and t(14; 18). This has resulted in 107 different

  3. First parasitological, histopathological and molecular characterization of Echinococcus vogeli Rausch and Bernstein, 1972 from Cuniculus paca Linnaeus, 1766 in the Cerrado biome (Mato Grosso do Sul, Brazil).

    Science.gov (United States)

    Bittencourt-Oliveira, Fernanda; Teixeira, Paulo; Alencar, Alba; Menezes, Rodrigo; Corrêa, Christiane; Neves, Leandro; Almeida, Fernanda; Daipert-Garcia, Daniel; Machado-Silva, José Roberto; Rodrigues-Silva, Rosângela

    2018-01-30

    Polycystic echinococcosis (PE) is caused by Echinococcus vogeli metacestodes (larval stage) in Neotropical countries. E. vogeli is trophically-transmitted between predators bush dogs (Speothos venaticus) and prey pacas (Cuniculus paca). In Brazil, reported PE cases are restricted to the Amazon biome. In this study, metacestodes from a paca hunted in Mato Grosso do Sul state (Cerrado biome) were identified morphological and histopathological techniques and further confirmed by molecular testing (sequencing of cytochrome C oxidase subunit I (cox1) gene) for the first time. Images of the whole liver showed superficial bubble-like hepatic masses. The parasitological analysis revealed large hooks (41.3 ± 1.2 μm length/12.8 ± 0.8 μm width) and small hooks (33.0 ± 1.5 μm length/11.1 ± 1.2 μm width), consistent with E. vogeli. Microscopically, the liver showed protoscoleces, a thick laminated layer, fibrosis, and inflammatory infiltrate in the adventitial layer. The DNA sequencing confirmed E. vogeli with 99% homology with sequences deposited in the GenBank. In addition, this finding greatly extends the geographic range of animal polycystic echinococcosis into the Cerrado. It is likely to occur in new biomes, where bush dogs and pacas share a given area in a trophic relationship. Copyright © 2017 Elsevier B.V. All rights reserved.

  4. LOFT uncertainty-analysis methodology

    International Nuclear Information System (INIS)

    Lassahn, G.D.

    1983-01-01

    The methodology used for uncertainty analyses of measurements in the Loss-of-Fluid Test (LOFT) nuclear-reactor-safety research program is described and compared with other methodologies established for performing uncertainty analyses

  5. LOFT uncertainty-analysis methodology

    International Nuclear Information System (INIS)

    Lassahn, G.D.

    1983-01-01

    The methodology used for uncertainty analyses of measurements in the Loss-of-Fluid Test (LOFT) nuclear reactor safety research program is described and compared with other methodologies established for performing uncertainty analyses

  6. Methodologies for local development in smart society

    Directory of Open Access Journals (Sweden)

    Lorena BĂTĂGAN

    2012-07-01

    Full Text Available All of digital devices which are connected through the Internet, are producing a big quantity of data. All this information can be turned into knowledge because we now have the computational power and solutions for advanced analytics to make sense of it. With this knowledge, cities could reduce costs, cut waste, and improve efficiency, productivity and quality of life for their citizens. The efficient/smart cities are characterized by more importance given to environment, resources, globalization and sustainable development. This paper represents a study on the methodologies for urban development that become the central element to our society.

  7. RHIC Data Correlation Methodology

    International Nuclear Information System (INIS)

    Michnoff, R.; D'Ottavio, T.; Hoff, L.; MacKay, W.; Satogata, T.

    1999-01-01

    A requirement for RHIC data plotting software and physics analysis is the correlation of data from all accelerator data gathering systems. Data correlation provides the capability for a user to request a plot of multiple data channels vs. time, and to make meaningful time-correlated data comparisons. The task of data correlation for RHIC requires careful consideration because data acquisition triggers are generated from various asynchronous sources including events from the RHIC Event Link, events from the two Beam Sync Links, and other unrelated clocks. In order to correlate data from asynchronous acquisition systems a common time reference is required. The RHIC data correlation methodology will allow all RHIC data to be converted to a common wall clock time, while still preserving native acquisition trigger information. A data correlation task force team, composed of the authors of this paper, has been formed to develop data correlation design details and provide guidelines for software developers. The overall data correlation methodology will be presented in this paper

  8. Intelligent systems engineering methodology

    Science.gov (United States)

    Fouse, Scott

    1990-01-01

    An added challenge for the designers of large scale systems such as Space Station Freedom is the appropriate incorporation of intelligent system technology (artificial intelligence, expert systems, knowledge-based systems, etc.) into their requirements and design. This presentation will describe a view of systems engineering which successfully addresses several aspects of this complex problem: design of large scale systems, design with requirements that are so complex they only completely unfold during the development of a baseline system and even then continue to evolve throughout the system's life cycle, design that involves the incorporation of new technologies, and design and development that takes place with many players in a distributed manner yet can be easily integrated to meet a single view of the requirements. The first generation of this methodology was developed and evolved jointly by ISX and the Lockheed Aeronautical Systems Company over the past five years on the Defense Advanced Research Projects Agency/Air Force Pilot's Associate Program, one of the largest, most complex, and most successful intelligent systems constructed to date. As the methodology has evolved it has also been applied successfully to a number of other projects. Some of the lessons learned from this experience may be applicable to Freedom.

  9. SMART performance analysis methodology

    International Nuclear Information System (INIS)

    Lim, H. S.; Kim, H. C.; Lee, D. J.

    2001-04-01

    To ensure the required and desired operation over the plant lifetime, the performance analysis for the SMART NSSS design is done by means of the specified analysis methodologies for the performance related design basis events(PRDBE). The PRDBE is an occurrence(event) that shall be accommodated in the design of the plant and whose consequence would be no more severe than normal service effects of the plant equipment. The performance analysis methodology which systematizes the methods and procedures to analyze the PRDBEs is as follows. Based on the operation mode suitable to the characteristics of the SMART NSSS, the corresponding PRDBEs and allowable range of process parameters for these events are deduced. With the developed control logic for each operation mode, the system thermalhydraulics are analyzed for the chosen PRDBEs using the system analysis code. Particularly, because of different system characteristics of SMART from the existing commercial nuclear power plants, the operation mode, PRDBEs, control logic, and analysis code should be consistent with the SMART design. This report presents the categories of the PRDBEs chosen based on each operation mode and the transition among these and the acceptance criteria for each PRDBE. It also includes the analysis methods and procedures for each PRDBE and the concept of the control logic for each operation mode. Therefore this report in which the overall details for SMART performance analysis are specified based on the current SMART design, would be utilized as a guide for the detailed performance analysis

  10. Relative Hazard Calculation Methodology

    International Nuclear Information System (INIS)

    DL Strenge; MK White; RD Stenner; WB Andrews

    1999-01-01

    The methodology presented in this document was developed to provide a means of calculating the RH ratios to use in developing useful graphic illustrations. The RH equation, as presented in this methodology, is primarily a collection of key factors relevant to understanding the hazards and risks associated with projected risk management activities. The RH equation has the potential for much broader application than generating risk profiles. For example, it can be used to compare one risk management activity with another, instead of just comparing it to a fixed baseline as was done for the risk profiles. If the appropriate source term data are available, it could be used in its non-ratio form to estimate absolute values of the associated hazards. These estimated values of hazard could then be examined to help understand which risk management activities are addressing the higher hazard conditions at a site. Graphics could be generated from these absolute hazard values to compare high-hazard conditions. If the RH equation is used in this manner, care must be taken to specifically define and qualify the estimated absolute hazard values (e.g., identify which factors were considered and which ones tended to drive the hazard estimation)

  11. Insights into PRA methodologies

    International Nuclear Information System (INIS)

    Gallagher, D.; Lofgren, E.; Atefi, B.; Liner, R.; Blond, R.; Amico, P.

    1984-08-01

    Probabilistic Risk Assessments (PRAs) for six nuclear power plants were examined to gain insight into how the choice of analytical methods can affect the results of PRAs. The PRA sreflectope considered was limited to internally initiated accidents sequences through core melt. For twenty methodological topic areas, a baseline or minimal methodology was specified. The choice of methods for each topic in the six PRAs was characterized in terms of the incremental level of effort above the baseline. A higher level of effort generally reflects a higher level of detail or a higher degree of sophistication in the analytical approach to a particular topic area. The impact on results was measured in terms of how additional effort beyond the baseline level changed the relative importance and ordering of dominant accident sequences compared to what would have been observed had methods corresponding to the baseline level of effort been employed. This measure of impact is a more useful indicator of how methods affect perceptions of plant vulnerabilities than changes in core melt frequency would be. However, the change in core melt frequency was used as a secondary measure of impact for nine topics where availability of information permitted. Results are presented primarily in the form of effort-impact matrices for each of the twenty topic areas. A suggested effort-impact profile for future PRAs is presented

  12. Scrum methodology in banking environment

    OpenAIRE

    Strihová, Barbora

    2015-01-01

    Bachelor thesis "Scrum methodology in banking environment" is focused on one of agile methodologies called Scrum and description of the methodology used in banking environment. Its main goal is to introduce the Scrum methodology and outline a real project placed in a bank focused on software development through a case study, address problems of the project, propose solutions of the addressed problems and identify anomalies of Scrum in software development constrained by the banking environmen...

  13. Experimental Economics: Some Methodological Notes

    OpenAIRE

    Fiore, Annamaria

    2009-01-01

    The aim of this work is presenting in a self-contained paper some methodological aspects as they are received in the current experimental literature. The purpose has been to make a critical review of some very influential papers dealing with methodological issues. In other words, the idea is to have a single paper where people first approaching experimental economics can find summarised (some) of the most important methodological issues. In particular, the focus is on some methodological prac...

  14. Central Nervous System Vasculitis

    Science.gov (United States)

    ... of Vasculitis / Central Nervous System (CNS) Vasculitis Central Nervous System (CNS) Vasculitis Swap out your current Facebook Profile ... Facebook personal page. Replace with this image. Central nervous system (CNS) vasculitis is inflammation of blood vessel walls ...

  15. Restaurant quality: the case of Central Slovenian region

    OpenAIRE

    Uran Maravić, Maja

    2016-01-01

    The purpose – This study has two key goals. The first part presents and compares different expert systems for assessing quality in the restaurants alongside the Ljubljana Quality Selection assessment methodology - LQS. In the second part, this study presents the results of a restaurant assessment in the Central Slovenian region using the LQS methodology. Design/methodology – In the first part of the study, we compare restaurant assessment systems through different criteria. In the second p...

  16. Modeling the carbon dynamics of the pastures ecosystem in Xinjiang with Biome-BGC model%基于BIOME-BGC模型的新疆牧区生态系统碳动态模拟

    Institute of Scientific and Technical Information of China (English)

    朱士华; 张弛; 李超凡

    2016-01-01

    干旱区生态系统对气候变化的响应复杂而敏感.牧区由于放牧效应的存在以及人为因素的频繁扰动,生态环境极为脆弱,加之实测数据的稀缺,很难对旱地牧区碳动态时空格局形成完整准确的认识.基于修正的Biome-BGC放牧模型,文中评估了新疆牧区1981-2007年间多种情景模式下的碳动态格局.结果表明:新疆牧区总体上表现为碳汇,27年间共固持59Tg(1Tg=1012g)C,其中VEGC(植被碳)和SOC(土壤碳)占比相当,分别占总固持量的43.04%、43.08%;放牧导致20.58Tg C的流失,而CO2施肥效应则导致了64.29TgC的固定,气候变化导致的碳失汇量为9.52Tg.80年代中期牧区VEGC存在显著下降过程,可能与这段时期的持续干旱有关,但SOC受此影响较小,研究描绘了旱地碳动态时空格局,为后续研究提供数据支持.

  17. Geotechnical site assessment methodology

    International Nuclear Information System (INIS)

    Tunbridge, L.W.; Richards, L.R.

    1985-09-01

    A final report summarizing the research conducted on geotechnical site assessment methodology at the Carwynnen test mine in Cornwall. The geological setting of the test site in the Cornubian granite batholith is described. The effect of structure imposed by discontinuities on the engineering behaviour of rock masses is discussed and the scanline survey method of obtaining data on discontinuities in the rock mass is described. The applicability of some methods of statistical analysis for discontinuity data is reviewed. The requirement for remote geophysical methods of characterizing the mass is discussed and experiments using seismic and ultrasonic velocity measurements are reported. Methods of determining the in-situ stresses are described and the final results of a programme of in-situ stress measurements using the overcoring and hydrofracture methods are reported. (author)

  18. UNCOMMON SENSORY METHODOLOGIES

    Directory of Open Access Journals (Sweden)

    Vladimír Vietoris

    2015-02-01

    Full Text Available Sensory science is the young but the rapidly developing field of the food industry. Actually, the great emphasis is given to the production of rapid techniques of data collection, the difference between consumers and trained panel is obscured and the role of sensory methodologists is to prepare the ways for evaluation, by which a lay panel (consumers can achieve identical results as a trained panel. Currently, there are several conventional methods of sensory evaluation of food (ISO standards, but more sensory laboratories are developing methodologies that are not strict enough in the selection of evaluators, their mechanism is easily understandable and the results are easily interpretable. This paper deals with mapping of marginal methods used in sensory evaluation of food (new types of profiles, CATA, TDS, napping.

  19. Safety class methodology

    International Nuclear Information System (INIS)

    Donner, E.B.; Low, J.M.; Lux, C.R.

    1992-01-01

    DOE Order 6430.1A, General Design Criteria (GDC), requires that DOE facilities be evaluated with respect to ''safety class items.'' Although the GDC defines safety class items, it does not provide a methodology for selecting safety class items. The methodology described in this paper was developed to assure that Safety Class Items at the Savannah River Site (SRS) are selected in a consistent and technically defensible manner. Safety class items are those in the highest of four categories determined to be of special importance to nuclear safety and, merit appropriately higher-quality design, fabrication, and industrial test standards and codes. The identification of safety class items is approached using a cascading strategy that begins at the 'safety function' level (i.e., a cooling function, ventilation function, etc.) and proceeds down to the system, component, or structure level. Thus, the items that are required to support a safety function are SCls. The basic steps in this procedure apply to the determination of SCls for both new project activities, and for operating facilities. The GDC lists six characteristics of SCls to be considered as a starting point for safety item classification. They are as follows: 1. Those items whose failure would produce exposure consequences that would exceed the guidelines in Section 1300-1.4, ''Guidance on Limiting Exposure of the Public,'' at the site boundary or nearest point of public access 2. Those items required to maintain operating parameters within the safety limits specified in the Operational Safety Requirements during normal operations and anticipated operational occurrences. 3. Those items required for nuclear criticality safety. 4. Those items required to monitor the release of radioactive material to the environment during and after a Design Basis Accident. Those items required to achieve, and maintain the facility in a safe shutdown condition 6. Those items that control Safety Class Item listed above

  20. Situating methodology within qualitative research.

    Science.gov (United States)

    Kramer-Kile, Marnie L

    2012-01-01

    Qualitative nurse researchers are required to make deliberate and sometimes complex methodological decisions about their work. Methodology in qualitative research is a comprehensive approach in which theory (ideas) and method (doing) are brought into close alignment. It can be difficult, at times, to understand the concept of methodology. The purpose of this research column is to: (1) define qualitative methodology; (2) illuminate the relationship between epistemology, ontology and methodology; (3) explicate the connection between theory and method in qualitative research design; and 4) highlight relevant examples of methodological decisions made within cardiovascular nursing research. Although there is no "one set way" to do qualitative research, all qualitative researchers should account for the choices they make throughout the research process and articulate their methodological decision-making along the way.

  1. SINGULAR SPECTRUM ANALYSIS: METHODOLOGY AND APPLICATION TO ECONOMICS DATA

    Institute of Scientific and Technical Information of China (English)

    Hossein HASSANI; Anatoly ZHIGLJAVSKY

    2009-01-01

    This paper describes the methodology of singular spectrum analysis (SSA) and demonstrate that it is a powerful method of time series analysis and forecasting, particulary for economic time series. The authors consider the application of SSA to the analysis and forecasting of the Iranian national accounts data as provided by the Central Bank of the Islamic Republic of lran.

  2. Mythology: methodological approach for the Classic Antiquity Historian

    Directory of Open Access Journals (Sweden)

    Andrea Lúcia Dorini de Oliveira Carvalho Rossi

    2008-01-01

    Full Text Available The central theme of this article is the application of the semiotical analysis as methodology of historical analysis of the mith present in the Dio Chrysostom's Discourses, Bitinian philosopher who lived between 40 and 115 A.D in Roman Empire.

  3. Methodological Innovation for the Study of Request Production in Telecollaboration

    Science.gov (United States)

    Cunningham, D. Joseph

    2017-01-01

    Second language (L2) request production has long been a central area of inquiry in interlanguage pragmatics, including how L2 learners mitigate their requests and whether such strategies correspond to or differ from those of first language (L1) speakers. Methodologically, such research often involves elicited speech and tends to isolate the speech…

  4. Six methodological steps to build medical data warehouses for research

    NARCIS (Netherlands)

    Szirbik, N. B.; Pelletier, C.; Chaussalet, T.; Chaussalet, 27629

    Purpose: We propose a simple methodology for heterogeneous data collection and central repository-style database design in healthcare. Our method can be used with or without other software development frameworks, and we argue that its application can save a relevant amount of implementation effort.

  5. Range-wide assessment of livestock grazing across the sagebrush biome

    Science.gov (United States)

    Veblen, Kari E.; Pyke, David A.; Jones, Christopher A.; Casazza, Michael L.; Assal, Timothy J.; Farinha, Melissa A.

    2011-01-01

    frequency of data collection varied across allotments and field offices. Analysis of the BLM's LHS data indicated 67 percent of allotments analyzed were meeting standards. For those not meeting standards, livestock were considered the causal factor in 45 percent of cases (about 15 percent of all allotments). Objective 3: We sought input from 42 university and federal rangeland science experts about how best to prioritize rangeland monitoring activities associated with ascertaining livestock impacts on vegetation resources. When we presented a hypothetical scenario to these scientists and asked them to prioritize monitoring activities, the most common response was to measure ground and vegetation cover, a variable that in many cases (10 of 13 field offices sampled) BLM had already identified as a monitoring priority. Experts identified several other traditional (for example, photo points) and emerging approaches (for example, high-resolution aerial photography) to monitoring. Objective 4: We used spatial allotment data (described in Objective 1) and remotely sensed vegetation data (sagebrush cover, herbaceous vegetation cover, litter and bare soil) to assess differences in allotment LHS status ("Not met" vs. "Met"; if "Not met" - livestock-caused vs. not). We then developed logistic regression models, using vegetation variables to predict LHS status of BLM allotments in sagebrush steppe habitats in Wyoming and portions of Montana and Colorado. In general, we found that more consistent data collection at the local level might improve suitability of data for broad-scale analyses of livestock impacts. As is, data collection methodologies varied across field offices and States, and we did not find any local-level monitoring data (Actual Use, Utilization, Vegetation Trend) that had been collected consistently enough over time or space for range-wide analyses. Moreover, continued and improved emphasis on monitoring also may aid local management decisions, particularly with respect

  6. Braile vena cava filter and greenfield filter in terms of centralization.

    Science.gov (United States)

    de Godoy, José Maria Pereira; Menezes da Silva, Adinaldo A; Reis, Luis Fernando; Miquelin, Daniel; Torati, José Luis Simon

    2013-01-01

    The aim of this study was to evaluate complications experienced during implantation of the Braile Vena Cava filter (VCF) and the efficacy of the centralization mechanism of the filter. This retrospective cohort study evaluated all Braile Biomédica VCFs implanted from 2004 to 2009 in Hospital de Base Medicine School in São José do Rio Preto, Brazil. Of particular concern was the filter's symmetry during implantation and complications experienced during the procedure. All the angiographic examinations performed during the implantation of the filters were analyzed in respect to the following parameters: migration of the filter, non-opening or difficulties in the implantation and centralization of the filter. A total of 112 Braile CVFs were implanted and there were no reports of filter opening difficulties or in respect to migration. Asymmetry was observed in 1/112 (0.9%) cases. A statistically significant difference was seen on comparing historical data on decentralization of the Greenfield filter with the data of this study. The Braile Biomédico filter is an evolution of the Greenfield filter providing improved embolus capture and better implantation symmetry.

  7. Climate induced changes in biome distribution, NPP and hydrology for potential vegetation of the Upper Midwest U.S

    Science.gov (United States)

    Motew, M.; Kucharik, C. J.

    2011-12-01

    While much attention is focused on future impacts of climate change on ecosystems, much can be learned about the previous interactions of ecosystems with recent climate change. In this study, we investigated the impacts of climate change on potential vegetation distributions (i.e. grasses, trees, and shrubs) and carbon and water cycling across the Upper Midwest USA from 1948-2007 using the Agro-IBIS dynamic vegetation model. We drove the model using a historical, gridded daily climate data set (temperature, precipitation, humidity, solar radiation, and wind speed) at a spatial resolution of 5 min x 5 min. While trends in climate variables exhibited heterogeneous spatial patterns over the study period, the overall impact of climate change on vegetation productivity was positive. We observed total increases in net primary productivity (NPP) ranging from 20-150 g C m-2, based on linear regression analysis. We determined that increased summer relative humidity, increased annual precipitation and decreased mean maximum summer temperatures were key variables contributing to these positive trends, likely through a reduction in soil moisture stress (e.g., increased available water) and heat stress. Model simulations also illustrated an increase in annual drainage throughout the region of 20-140 mm yr-1, driven by substantial increases in annual precipitation. Evapotranspiration had a highly variable spatial trend over the 60-year period, with total change over the study period ranging between -100 and +100 mm yr-1. We also analyzed potential changes in plant functional type (PFT) distributions at the biome level, but hypothesize that the model may be unable to adequately capture competitive interactions among PFTs as well as the dynamics between upper and lower canopies consisting of trees, grasses and shrubs. An analysis of the bioclimatic envelopes for PFTs common to the region revealed no significant change to the boreal conifer tree climatic domain over the study

  8. Persistence of historical population structure in an endangered species despite near-complete biome conversion in California's San Joaquin Desert.

    Science.gov (United States)

    Richmond, Jonathan Q; Wood, Dustin A; Westphal, Michael F; Vandergast, Amy G; Leaché, Adam D; Saslaw, Lawrence R; Butterfield, H Scott; Fisher, Robert N

    2017-07-01

    Genomic responses to habitat conversion can be rapid, providing wildlife managers with time-limited opportunities to enact recovery efforts that use population connectivity information that reflects predisturbance landscapes. Despite near-complete biome conversion, such opportunities may still exist for the endemic fauna and flora of California's San Joaquin Desert, but comprehensive genetic data sets are lacking for nearly all species in the region. To fill this knowledge gap, we studied the rangewide population structure of the endangered blunt-nosed leopard lizard Gambelia sila, a San Joaquin Desert endemic, using restriction site-associated DNA (RAD), microsatellite and mtDNA data to test whether admixture patterns and estimates of effective migration surfaces (EEMS) can identify land areas with high population connectivity prior to the conversion of native xeric habitats. Clustering and phylogenetic analyses indicate a recent shared history between numerous isolated populations and EEMS reveals latent signals of corridors and barriers to gene flow over areas now replaced by agriculture and urbanization. Conflicting histories between the mtDNA and nuclear genomes are consistent with hybridization with the sister species G. wislizenii, raising important questions about where legal protection should end at the southern range limit of G. sila. Comparative analysis of different data sets also adds to a growing list of advantages in using RAD loci for genetic studies of rare species. We demonstrate how the results of this work can serve as an evolutionary guidance tool for managing endemic, arid-adapted taxa in one of the world's most compromised landscapes. Published 2017. This article is a U.S. Government work and is in the public domain in the USA.

  9. Evaluation of seed extracts from plants found in the Caatinga biome for the control of Aedes aegypti.

    Science.gov (United States)

    Barbosa, Patrícia Batista Barra Medeiros; de Oliveira, Julliete Medeiros; Chagas, Juliana Macêdo; Rabelo, Luciana Maria Araujo; de Medeiros, Guilherme Fulgêncio; Giodani, Raquel Brant; da Silva, Elizeu Antunes; Uchôa, Adriana Ferreira; de Fátima de Freire Melo Ximenes, Maria

    2014-10-01

    Dengue fever, currently the most important arbovirus, is transmitted by the bite of the Aedes aegypti mosquito. Given the absence of a prophylactic vaccine, the disease can only be controlled by combating the vector insect. However, increasing reports of resistance and environmental damage caused by insecticides have led to the urgent search for new safer alternatives. In this regard, plants stand out as a source of easy-to-obtain biodegradable insecticide molecules. Twenty (20) plant seed extracts from the Caatinga, an exclusively Brazilian biome, were prepared. Sodium phosphate (50 mM, pH 8.0) was used as extractor. The extracts were used in bioassays and submitted to partial characterisation. A Probit analysis of insecticides was carried out, and intergroup differences were verified by the Student's t test and ANOVA. All the extracts exhibited larvicidal and ovipositional deterrence activity. The extracts of Amburana cearenses, Piptadenia viridiflora, Erythrina velutina, Myracrodruon urundeuva and Schinopsis brasiliensis were also pupicides, while the extracts of P. viridiflora, E. velutina, A. cearenses, Anadenanthera colubrina, Diocleia grandiflora, Bauhinia cheilantha, Senna spectabilis, Caesalpinia pyramidalis, Mimosa regnelli and Genipa americana displayed adulticidal activity. Egg laying was compromised when females were fed extracts of Ricinus communis, Croton sonderianus and S. brasiliensis. At least two proteins with insecticidal activity were found in all the extracts. Phenol compounds were identified in all the extracts and flavonoids, triterpenes or alkaloids in 14 of them. The results show the potential of plant seed extracts from the Caatinga as a source of active molecules against A. aegypti mosquitos.

  10. Persistence of historical population structure in an endangered species despite near-complete biome conversion in California's San Joaquin Desert

    Science.gov (United States)

    Richmond, Jonathan Q.; Wood, Dustin A.; Westphal, Michael F.; Vandergast, Amy; Leache, Adam D.; Saslaw, Lawrence; Butterfield, H. Scott; Fisher, Robert N.

    2017-01-01

    Genomic responses to habitat conversion can be rapid, providing wildlife managers with time-limited opportunities to enact recovery efforts that use population connectivity information that reflects predisturbance landscapes. Despite near-complete biome conversion, such opportunities may still exist for the endemic fauna and flora of California's San Joaquin Desert, but comprehensive genetic data sets are lacking for nearly all species in the region. To fill this knowledge gap, we studied the rangewide population structure of the endangered blunt-nosed leopard lizard Gambelia sila, a San Joaquin Desert endemic, using restriction site-associated DNA (RAD), microsatellite and mtDNA data to test whether admixture patterns and estimates of effective migration surfaces (EEMS) can identify land areas with high population connectivity prior to the conversion of native xeric habitats. Clustering and phylogenetic analyses indicate a recent shared history between numerous isolated populations and EEMS reveals latent signals of corridors and barriers to gene flow over areas now replaced by agriculture and urbanization. Conflicting histories between the mtDNA and nuclear genomes are consistent with hybridization with the sister species G. wislizenii, raising important questions about where legal protection should end at the southern range limit of G. sila. Comparative analysis of different data sets also adds to a growing list of advantages in using RAD loci for genetic studies of rare species. We demonstrate how the results of this work can serve as an evolutionary guidance tool for managing endemic, arid-adapted taxa in one of the world's most compromised landscapes.

  11. A new distribution range of Ateles chamek (Humboldt 1812) in an ecotone of three biomes in the Paraguay River Basin.

    Science.gov (United States)

    Dos Santos-Filho, Manoel; Bernardo, Christine Steiner São; Van der Laan Barbosa, Henry Willian; Gusmão, Almério Câmara; Jerusalinsky, Leandro; Canale, Gustavo Rodrigues

    2017-07-01

    Historical records of Ateles chamek (black-faced black spider monkey) suggest that the species range extends further south of the known species distribution, within an ecotonal region between the Amazonia, Cerrado and Pantanal biomes in Brazil. Ecotones are zones of habitat transition with high species richness that remain undersampled as conservationists often prioritize biodiversity hotspots. Thus, distribution ranges may be inaccurately measured when species occur in ecotonal zones. We report the first precise records of A. chamek in 24 new localities surveyed in the ecotonal zone of the Upper Paraguay River Basin, and we present subgroup encounter rates in the 11 largest patches (>70 ha) along 207 km of the line transects surveyed. The new records represent an expansion of the distribution of A. chamek approximately 200 km to the south, increasing the known extent of its occurrence by 10.8%. Local tributaries may not be barriers for spider monkeys, which are able to swim and cross slow-moving rivers. However, the dry forests of the Cerrado and the flooded areas of the Pantanal, formed by grassland and scarce trees, may be habitat barriers for A. chamek. The populations living in this ecotonal zone are relatively abundant (1.1-6.67 subgroup sightings/10 km) compared to the heavily hunted continuous forests of northern Amazonia. Furthermore, these values are similar to those for other Ateles spp. inhabiting forests with low or no hunting pressure. We highlight the need for specific conservation action to protect the spider monkeys living in these landscapes, which are threatened by agriculture expansion.

  12. Aspectos biométricos y reproductivos de Boquichico Prochilodus nigricans Agassiz, 1829 (Pisces: Prochilodontidae en Ucayali, Perú

    Directory of Open Access Journals (Sweden)

    José C. Riofrío Q.

    2013-06-01

    Full Text Available El conocimiento de la biología y pesquería de una especie explotada es esencial para un manejo racional y una producción sostenida. De febrero a diciembre de 1994 se colectó información de una de las especies más importantes por los volúmenes de desembarque en Ucayali, el boquichico (Prochilodus nigricans. Se analizaron aspectos biométricos (relación longitud total - peso total: LTPT y reproductivos (proporción por sexos, época de reproducción, tallas de madurez de esta especie. La relación LT-PT no mostró diferencias significativas entre las regresiones de machos y hembras (análisis de variancias residual F0,05 proponiéndose el empleo de una ecuación conjunta para la especie de la forma PT = 0,0211 LT 2,8592. La proporción sexual total no mostró diferencias significativas (χ 2 0,05 al asumir una relación 1:1. El análisis de la progresión de los estadios de madurez confirma la reproducción durante la temporada de elevación del nivel del río Ucayali (octubre-enero. La talla de madurez calculada para los machos fue de 24,5 cm y para las hembras de 26.1 cm, recomendándose esta última para el manejo de la pesquería.

  13. Anthropization on the Cerrado biome in the Brazilian Uruçuí-Una Ecological Station estimated from orbital images.

    Science.gov (United States)

    Pereira, A C; Gama, V F

    2010-11-01

    In this study we analysed the dynamics of deforestation and burnings during the dry seasons from 2003 to 2008 in the Uruçuí-Una Ecological Station (UUES) and its buffer zone, located in the Cerrado biome of the southwest of Piauí, a Brazil's State, based on images from the orbital sensors CCD/CBERS-2 and TM/Landsat-5. Two dates from each of the years were interpreted and analysed: one in the middle of the dry season and one at the end. The deforested areas were expanded through the period analysed and were larger in the buffer zone, suggesting a relative protection of the UUES. New cut-offs were predictable because of the early opening of roads that would become their limits. The burning scars were larger at the end of the dry season as a consequence of the management and implementation of agricultures and pastures. In 2004 and 2007 these scars were larger probably because of the increase of dry phytomass that every three years is big enough to spread the fire originated in the anthropogenic burnings through the native vegetation. This scenario reaffirms the need for: stronger enforcement in order to stop anthropisation in the UUES and a management plan, absent for this unit so far. These proceedings are urgent also because the UUES is located in one of the most preserved regions of the Cerrado and controversially where intense anthropisation in ongoing, which stresses the lack, need and urgency of biological conservation proceedings for the Piauí's southeastern Cerrado.

  14. Health assessment of wild lowland tapir (Tapirus terrestris) populations in the Atlantic Forest and Pantanal biomes, Brazil (1996-2012).

    Science.gov (United States)

    Medici, Emília Patrícia; Mangini, Paulo Rogerio; Fernandes-Santos, Renata Carolina

    2014-10-01

    Abstract The lowland tapir (Tapirus terrestris) is found in South America and is listed as Vulnerable to Extinction by the International Union for Conservation of Nature, Red List of Threatened Species. Health issues, particularly infectious diseases, are potential threats for the species. Health information from 65 wild tapirs from two Brazilian biomes, Atlantic Forest (AF) and Pantanal (PA), were collected during a long-term study (1996-2012). The study included physic, hematologic and biochemical evaluations, microbiologic cultures, urinalysis, and serologic analyses for antibodies against 13 infectious agents (viral and bacterial). The AF and PA tapirs were significantly different for several hematologic and biochemical parameters. Ten bacteria taxa were identified in the AF and 26 in the PA. Antibodies against five viruses were detected: Bluetongue virus, eastern equine encephalitis virus, western equine encephalitis virus, infectious bovine rhinotracheitis virus, and porcine parvovirus. A high prevalence of exposure to Leptospira interrogans (10 serovars: Autumnalis, Bratislava, Canicola, Copenhageni, Grippotyphosa, Hardjo, Hebdomadis, Icterohaemorrhagiae, Pomona, and Pyrogenes) was detected in both the AF and PA sites. A greater diversity of serovars and higher antibody titers were found in the PA. Statistically significant differences between sites were found for L. interrogans, equine encephalitis virus, and porcine parvovirus. Based on physical evaluations, both AF and PA populations were healthy. The differences in the overall health profile of the AF and PA tapir populations appear to be associated with environmental factors and infectious diseases ecology. The extensive datasets on hematology, biochemistry, urinalysis, and microbiology results from this paper can be used as reference values for wild tapirs.

  15. FLORISTIC-STRUCTURAL CHARACTERIZATION AND SUCCESSIONAL GROUP OF TREE SPECIES IN THE CERRADO BIOME OF TOCANTINS STATE, BRAZIL

    Directory of Open Access Journals (Sweden)

    EDER PEREIRA MIGUEL

    2016-01-01

    Full Text Available The objective of this study was to characterize the floristic composition, vegetation structure and ecological group of tree species in a cerradão forest (Cerrado biome of Palmas, Tocantins State, Brazil. A forest inventory was performed in an area of 10.15 hectares, using systematic sampling with plots of 400 m², in which all standing trees, alive and dead, that had diameter at breast height (DBH ≥ 5 cm were sampled and identified. A linear plateau regression model (LPR was used for sample sufficiency analysis. The Shannon index (H’ was used for assess the floristic diversity, and the Importance Value Index (IVI for assess the horizontal structure. The forest was classified in three strata according to vertical structure analysis. The LPR showed that the sampling size was adequate. The predominate species in the area were Myrcia splendens, Emmotum nitens and Qualea parviflora, and species from the families Fabaceae and Chrysobalanaceae. The pioneer (613 individuals ha-1 and climax (530 individuals ha-1 species were the predominating groups. Regarding the richness index, the number of climax (57 species and pioneer (25 species species stood out. The alpha floristic diversity was 3.35 nats individuals-1 and the Pielou equability value J = 0.76. The diametric distribution showed a negative and balanced exponential pattern. Regarding the vertical stratification, the smallest amount of individuals was in the upper stratum (13% and the highest in the mid stratum (63% and in the lower stratum (24%. The use of floristic composition tools with horizontal and vertical structure analysis was effective for understand the tree community, which may be considered structured and diverse, thus able to restructure possible disturbances when preserved.

  16. Anthropization on the Cerrado biome in the Brazilian Uruçuí-Una Ecological Station estimated from orbital images

    Directory of Open Access Journals (Sweden)

    AC. Pereira

    Full Text Available In this study we analysed the dynamics of deforestation and burnings during the dry seasons from 2003 to 2008 in the Uruçuí-Una Ecological Station (UUES and its buffer zone, located in the Cerrado biome of the southwest of Piauí, a Brazil's State, based on images from the orbital sensors CCD/CBERS-2 and TM/Landsat-5. Two dates from each of the years were interpreted and analysed: one in the middle of the dry season and one at the end. The deforested areas were expanded through the period analysed and were larger in the buffer zone, suggesting a relative protection of the UUES. New cut-offs were predictable because of the early opening of roads that would become their limits. The burning scars were larger at the end of the dry season as a consequence of the management and implementation of agricultures and pastures. In 2004 and 2007 these scars were larger probably because of the increase of dry phytomass that every three years is big enough to spread the fire originated in the anthropogenic burnings through the native vegetation. This scenario reaffirms the need for: stronger enforcement in order to stop anthropisation in the UUES and a management plan, absent for this unit so far. These proceedings are urgent also because the UUES is located in one of the most preserved regions of the Cerrado and controversially where intense anthropisation in ongoing, which stresses the lack, need and urgency of biological conservation proceedings for the Piauí's southeastern Cerrado.

  17. Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome.

    Science.gov (United States)

    Andrade, Ana Camila; Fróes, Adriana; Lopes, Fabyano Álvares Cardoso; Thompson, Fabiano L; Krüger, Ricardo Henrique; Dinsdale, Elizabeth; Bruce, Thiago

    2017-07-01

    Semi-arid and arid areas occupy about 33% of terrestrial ecosystems. However, little information is available about microbial diversity in the semi-arid Caatinga, which represents a unique biome that extends to about 11% of the Brazilian territory and is home to extraordinary diversity and high endemism level of species. In this study, we characterized the diversity of microbial genes associated with biomass conversion (carbohydrate-active enzymes, or so-called CAZYmes) in soil and freshwater of the Caatinga. Our results showed distinct CAZYme profiles in the soil and freshwater samples. Glycoside hydrolases and glycosyltransferases were the most abundant CAZYme families, with glycoside hydrolases more dominant in soil (∼44%) and glycosyltransferases more abundant in freshwater (∼50%). The abundances of individual glycoside hydrolase, glycosyltransferase, and carbohydrate-binding module subfamilies varied widely between soil and water samples. A predominance of glycoside hydrolases was observed in soil, and a higher contribution of enzymes involved in carbohydrate biosynthesis was observed in freshwater. The main taxa associated with the CAZYme sequences were Planctomycetia (relative abundance in soil, 29%) and Alphaproteobacteria (relative abundance in freshwater, 27%). Approximately 5-7% of CAZYme sequences showed low similarity with sequences deposited in non-redundant databases, suggesting putative homologues. Our findings represent a first attempt to describe specific microbial CAZYme profiles for environmental samples. Characterizing these enzyme groups associated with the conversion of carbohydrates in nature will improve our understanding of the significant roles of enzymes in the carbon cycle. We identified a CAZYme signature that can be used to discriminate between soil and freshwater samples, and this signature may be related to the microbial species adapted to the habitat. The data show the potential ecological roles of the CAZYme repertoire and

  18. Transmission Reinforcements in the Central American Regional Power System

    Energy Technology Data Exchange (ETDEWEB)

    Elizondo, Marcelo A.; Vallem, Mallikarjuna R.; Samaan, Nader A.; Makarov, Yuri V.; Vyakaranam, Bharat; Nguyen, Tony B.; Munoz, Christian; Herrera, Ricardo; Midence, Diego; Shpitsberg, Anna

    2016-07-25

    The Central American regional interconnected power system (SER) connects the countries members of the Central American regional electricity market (MER): Guatemala, El Salvador, Honduras, Nicaragua, Costa Rica, and Panama. The SER was a result of a long term regional effort, and was initially conceived to transfer 300 MW between countries. However, the current transfer limits between countries range from 70 MW to 300 MW. Regional entities, like CRIE (Regional Commission of Electrical Interconnection), EOR (Central American Regional System Operator), and CDMER (Board of Directors of the Central American Market) are working on coordinating the national transmission expansion plans with regional transmission planning efforts. This paper presents experience in Central America region to recommend transmission reinforcements to achieve 300 MW transfer capacity between any pair of member countries of the Central American regional electricity market (MER). This paper also provides a methodology for technical analysis and for coordination among the regional and national entities. This methodology is unique for transmission systems of these characteristics.

  19. Methodological Problems of Nanotechnoscience

    Science.gov (United States)

    Gorokhov, V. G.

    Recently, we have reported on the definitions of nanotechnology as a new type of NanoTechnoScience and on the nanotheory as a cluster of the different natural and engineering theories. Nanotechnology is not only a new type of scientific-engineering discipline, but it evolves also in a “nonclassical” way. Nanoontology or nano scientific world view has a function of the methodological orientation for the choice the theoretical means and methods toward a solution to the scientific and engineering problems. This allows to change from one explanation and scientific world view to another without any problems. Thus, nanotechnology is both a field of scientific knowledge and a sphere of engineering activity, in other words, NanoTechnoScience is similar to Systems Engineering as the analysis and design of large-scale, complex, man/machine systems but micro- and nanosystems. Nano systems engineering as well as Macro systems engineering includes not only systems design but also complex research. Design orientation has influence on the change of the priorities in the complex research and of the relation to the knowledge, not only to “the knowledge about something”, but also to the knowledge as the means of activity: from the beginning control and restructuring of matter at the nano-scale is a necessary element of nanoscience.

  20. Methodological themes and variations

    International Nuclear Information System (INIS)

    Tetlock, P.E.

    1989-01-01

    This paper reports on the tangible progress that has been made in clarifying the underlying processes that affect both the likelihood of war in general and of nuclear war in particular. It also illustrates how difficult it is to make progress in this area. Nonetheless, what has been achieved should not be minimized. We have learned a good deal on both the theoretical and the methodological fronts and, perhaps, most important, we have learned a good deal about the limits of our knowledge. Knowledge of our ignorance---especially in a policy domain where confident, even glib, causal assertions are so common---can be a major contribution in itself. The most important service the behavioral and social sciences can currently provide to the policy making community may well be to make thoughtful skepticism respectable: to sensitize those who make key decisions to the uncertainty surrounding our understanding of international conflict and to the numerous qualifications that now need to be attached to simple causal theories concerning the origins of war

  1. Engineering radioecology: Methodological considerations

    International Nuclear Information System (INIS)

    Nechaev, A.F.; Projaev, V.V.; Sobolev, I.A.; Dmitriev, S.A.

    1995-01-01

    The term ''radioecology'' has been widely recognized in scientific and technical societies. At the same time, this scientific school (radioecology) does not have a precise/generally acknowledged structure, unified methodical basis, fixed subjects of investigation, etc. In other words, radioecology is a vast, important but rather amorphous conglomerate of various ideas, amalgamated mostly by their involvement in biospheric effects of ionizing radiation and some conceptual stereotypes. This paradox was acceptable up to a certain time. However, with the termination of the Cold War and because of remarkable political changes in the world, it has become possible to convert the problem of environmental restoration from the scientific sphere in particularly practical terms. Already the first steps clearly showed an imperfection of existing technologies, managerial and regulatory schemes; lack of qualified specialists, relevant methods and techniques; uncertainties in methodology of decision-making, etc. Thus, building up (or maybe, structuring) of special scientific and technological basis, which the authors call ''engineering radioecology'', seems to be an important task. In this paper they endeavored to substantiate the last thesis and to suggest some preliminary ideas concerning the subject matter of engineering radioecology

  2. Dosimetric methodology of the ICRP

    International Nuclear Information System (INIS)

    Eckerman, K.F.

    1994-01-01

    Establishment of guidance for the protection of workers and members of the public from radiation exposures necessitates estimation of the radiation dose to tissues of the body at risk. The dosimetric methodology formulated by the International Commission on Radiological Protection (ICRP) is intended to be responsive to this need. While developed for radiation protection, elements of the methodology are often applied in addressing other radiation issues; e.g., risk assessment. This chapter provides an overview of the methodology, discusses its recent extension to age-dependent considerations, and illustrates specific aspects of the methodology through a number of numerical examples

  3. Transmission pricing: paradigms and methodologies

    Energy Technology Data Exchange (ETDEWEB)

    Shirmohammadi, Dariush [Pacific Gas and Electric Co., San Francisco, CA (United States); Vieira Filho, Xisto; Gorenstin, Boris [Centro de Pesquisas de Energia Eletrica (CEPEL), Rio de Janeiro, RJ (Brazil); Pereira, Mario V.P. [Power System Research, Rio de Janeiro, RJ (Brazil)

    1994-12-31

    In this paper we describe the principles of several paradigms and methodologies for pricing transmission services. The paper outlines some of the main characteristics of these paradigms and methodologies such as where they may be used for best results. Due to their popularity, power flow based MW-mile and short run marginal cost pricing methodologies will be covered in some detail. We conclude the paper with examples of the application of these two pricing methodologies for pricing transmission services in Brazil. (author) 25 refs., 2 tabs.

  4. Analytical methodology for nuclear safeguards

    International Nuclear Information System (INIS)

    Ramakumar, K.L.

    2011-01-01

    This paper attempts to briefly describe the analytical methodologies available and also highlight some of the challenges, expectations from nuclear material accounting and control (NUMAC) point of view

  5. Country report: a methodology

    International Nuclear Information System (INIS)

    Colin, A.

    2013-01-01

    This paper describes a methodology which could be applicable to establish a country report. In the framework of nuclear non proliferation appraisal and IAEA safeguards implementation, it is important to be able to assess the potential existence of undeclared nuclear materials and activities as undeclared facilities in the country under review. In our views a country report should aim at providing detailed information on nuclear related activities for each country examined taken 'as a whole' such as nuclear development, scientific and technical capabilities, etc. In order to study a specific country, we need to know if there is already an operating nuclear civil programme or not. In the first case, we have to check carefully if it could divert nuclear material, if there are misused declared facilities or if they operate undeclared facilities and conduct undeclared activities aiming at manufacturing nuclear weapon. In the second case, we should pay attention to the development of a nuclear civil project. A country report is based on a wide span of information (most of the time coming from open sources but sometimes coming also from confidential or private ones). Therefore, it is important to carefully check the nature and the credibility (reliability?) of these sources through cross-check examination. Eventually, it is necessary to merge information from different sources and apply an expertise filter. We have at our disposal a lot of performing tools to help us to assess, understand and evaluate the situation (cartography, imagery, bibliometry, etc.). These tools allow us to offer the best conclusions as far as possible. The paper is followed by the slides of the presentation. (author)

  6. Microbiological Methodology in Astrobiology

    Science.gov (United States)

    Abyzov, S. S.; Gerasimenko, L. M.; Hoover, R. B.; Mitskevich, I. N.; Mulyukin, A. L.; Poglazova, M. N.; Rozanov, A. Y.

    2005-01-01

    Searching for life in astromaterials to be delivered from the future missions to extraterrestrial bodies is undoubtedly related to studies of the properties and signatures of living microbial cells and microfossils on Earth. As model terrestrial analogs of Martian polar subsurface layers are often regarded the Antarctic glacier and Earth permafrost habitats where alive microbial cells preserved viability for millennia years due to entering the anabiotic state. For the future findings of viable microorganisms in samples from extraterrestrial objects, it is important to use a combined methodology that includes classical microbiological methods, plating onto nutrient media, direct epifluorescence and electron microscopy examinations, detection of the elemental composition of cells, radiolabeling techniques, PCR and FISH methods. Of great importance is to ensure authenticity of microorganisms (if any in studied samples) and to standardize the protocols used to minimize a risk of external contamination. Although the convincing evidence of extraterrestrial microbial life will may come from the discovery of living cells in astromaterials, biomorphs and microfossils must also be regarded as a target in search of life evidence bearing in mind a scenario that alive microorganisms had not be preserved and underwent mineralization. Under the laboratory conditions, processes that accompanied fossilization of cyanobacteria were reconstructed, and artificially produced cyanobacterial stromatolites resembles by their morphological properties those found in natural Earth habitats. Regarding the vital importance of distinguishing between biogenic and abiogenic signatures and between living and fossil microorganisms in analyzed samples, it is worthwhile to use some previously developed approaches based on electron microscopy examinations and analysis of elemental composition of biomorphs in situ and comparison with the analogous data obtained for laboratory microbial cultures and

  7. Kaupapa Maori Methodology: Trusting the Methodology through Thick and Thin

    Science.gov (United States)

    Hiha, Anne Aroha

    2016-01-01

    Kaupapa Maori is thoroughly theorised in academia in Aotearoa and those wishing to use it as their research methodology can find support through the writing of a number of Maori academics. What is not so well articulated, is the experiential voice of those who have used Kaupapa Maori as research methodology. My identity as a Maori woman…

  8. Biome specificity of distinct genetic lineages within the four-striped mouse Rhabdomys pumilio (Rodentia: Muridae) from southern Africa with implications for taxonomy.

    Science.gov (United States)

    du Toit, Nina; van Vuuren, Bettine Jansen; Matthee, Sonja; Matthee, Conrad A

    2012-10-01

    Within southern Africa, a link between past climatic changes and faunal diversification has been hypothesized for a diversity of taxa. To test the hypothesis that evolutionary divergences may be correlated to vegetation changes (induced by changes in climate), we selected the widely distributed four-striped mouse, Rhabdomys, as a model. Two species are currently recognized, the mesic-adapted R. dilectus and arid-adapted R. pumilio. However, the morphology-based taxonomy and the distribution boundaries of previously described subspecies remain poorly defined. The current study, which spans seven biomes, focuses on the spatial genetic structure of the arid-adapted R. pumilio (521 specimens from 31 localities), but also includes limited sampling of the mesic-adapted R. dilectus (33 specimens from 10 localities) to act as a reference for interspecific variation within the genus. The mitochondrial COI gene and four nuclear introns (Eef1a1, MGF, SPTBN1, Bfib7) were used for the construction of gene trees. Mitochondrial DNA analyses indicate that Rhabdomys consists of four reciprocally monophyletic, geographically structured clades, with three distinct lineages present within the arid-adapted R. pumilio. These monophyletic lineages differ by at least 7.9% (±0.3) and these results are partly confirmed by a multilocus network of the combined nuclear intron dataset. Ecological niche modeling in MaxEnt supports a strong correlation between regional biomes and the distribution of distinct evolutionary lineages of Rhabdomys. A Bayesian relaxed molecular clock suggests that the geographic clades diverged between 3.09 and 4.30Ma, supporting the hypothesis that the radiation within the genus coincides with paleoclimatic changes (and the establishment of the biomes) characterizing the Miocene-Pliocene boundary. Marked genetic divergence at the mitochondrial DNA level, coupled with strong nuclear and mtDNA signals of non-monophyly of R. pumilio, support the notion that a taxonomic

  9. Biogeographical distribution analysis of hydrocarbon degrading and biosurfactant producing genes suggests that near-equatorial biomes have higher abundance of genes with potential for bioremediation.

    Science.gov (United States)

    Oliveira, Jorge S; Araújo, Wydemberg J; Figueiredo, Ricardo M; Silva-Portela, Rita C B; de Brito Guerra, Alaine; da Silva Araújo, Sinara Carla; Minnicelli, Carolina; Carlos, Aline Cardoso; de Vasconcelos, Ana Tereza Ribeiro; Freitas, Ana Teresa; Agnez-Lima, Lucymara F

    2017-07-27

    Bacterial and Archaeal communities have a complex, symbiotic role in crude oil bioremediation. Their biosurfactants and degradation enzymes have been in the spotlight, mainly due to the awareness of ecosystem pollution caused by crude oil accidents and their use. Initially, the scientific community studied the role of individual microbial species by characterizing and optimizing their biosurfactant and oil degradation genes, studying their individual distribution. However, with the advances in genomics, in particular with the use of New-Generation-Sequencing and Metagenomics, it is now possible to have a macro view of the complex pathways related to the symbiotic degradation of hydrocarbons and surfactant production. It is now possible, although more challenging, to obtain the DNA information of an entire microbial community before automatically characterizing it. By characterizing and understanding the interconnected role of microorganisms and the role of degradation and biosurfactant genes in an ecosystem, it becomes possible to develop new biotechnological approaches for bioremediation use. This paper analyzes 46 different metagenome samples, spanning 20 biomes from different geographies obtained from different research projects. A metagenomics bioinformatics pipeline, focused on the biodegradation and biosurfactant-production pathways, genes and organisms, was applied. Our main results show that: (1) surfactation and degradation are correlated events, and therefore should be studied together; (2) terrestrial biomes present more degradation genes, especially cyclic compounds, and less surfactation genes, when compared to water biomes; and (3) latitude has a significant influence on the diversity of genes involved in biodegradation and biosurfactant production. This suggests that microbiomes found near the equator are richer in genes that have a role in these processes and thus have a higher biotechnological potential. In this work we have focused on the

  10. Carbon isotope discrimination of arctic and boreal biomes inferred from remote atmospheric measurements and a biosphere-atmosphere model - art. no. 1028

    Energy Technology Data Exchange (ETDEWEB)

    Randerson, J.T.; Still, C.J.; Balle, J.J.; Fung, I.Y.; Doney, S.C.; Tans, P.P.; Conway, T.J.; White, J.W.C.; Vaughn, B.; Suits, N.; Denning, A.S. [CALTECH, Pasadena, CA (United States). Div. of Geology & Planetary Science

    2002-07-01

    Estimating discrimination against C-13 during photosynthesis at landscape, regional, and biome scales is difficult because of large-scale variability in plant stress, vegetation composition, and photosynthetic pathway. The authors present estimates of C-13 discrimination for northern biomes based on a biosphere-atmosphere model and on National Oceanic and Atmospheric Administration Climate Monitoring and Diagnostics Laboratory and Institute of Arctic and Alpine Research remote flask measurements. With the inversion approach, solutions were found for three ecophysiological parameters of the northern biosphere {delta}{sup 13}C discrimination, a net primary production light use efficiency, and a temperature sensitivity of heterotrophic respiration (a Q10 factor) that provided a best fit between modeled and observed {delta}{sup 13}C and CO{sub 2}. The analysis attempted to explicitly correct for fossil fuel emissions, remote C4 ecosystem fluxes, ocean exchange, and isotopic disequilibria of terrestrial heterotrophic respiration caused by the Suess effect. A photosynthetic discrimination was obtained for arctic and boreal biomes between 19.0 and 19.6%. The inversion analysis suggests that Q10 and light use efficiency values that minimize the cost function covary. The optimal light use efficiency was 0.47 gC MJ{sup -1} photosynthetically active radiation, and the optimal Q10 value was 1.52. Fossil fuel and ocean exchange contributed proportionally more to month-to-month changes in the atmospheric growth rate of {delta}{sup 13}C and CO{sub 2} during winter months, suggesting that remote atmospheric observations during the summer may yield more precise estimates of the isotopic composition of the biosphere.

  11. 基于Biome-BGC模型的西双版纳橡胶林碳收支模拟%Simulation of carbon budget in rubber plantations in Xishuangbanna based on the Biome-BGC model

    Institute of Scientific and Technical Information of China (English)

    孙燕瓷; 马友鑫; 曹坤芳; 沈金祥; 张一平; 梅岑岑; 刘文俊

    2017-01-01

    以西双版纳橡胶适宜种植区(海拔550-600m)的橡胶林(Hevea brasiliensis)为研究对象,应用参数同化后的Biome-BGC模型模拟了1959-2012年橡胶林的碳循环.结果表明,(1)与涡度相关监测结果相比,橡胶林年总初级生产力(Gross Primary Productivity,GPP)、年总呼吸(Total Respiration,Rt)的模拟精度分别为98.37%和90%.由于对年GPP的过低估计和对年Rt的过高估计,年净生态系统交换量(Net Ecosystem Exchange,NEE)的模拟值比实测值低157.35 g C m-2 a-1.但若考虑干胶碳(139gCm-2a-1),模拟值与实测值十分接近;(2)橡胶林在模拟进行的前8年里因异养呼吸较高,以碳排放为主,NEE平均约357 gC m-2a-1;之后转为以碳固定为主,NEE平均约-146 g C m-2a-1;(3)橡胶林在40年的更新周期中可固定碳1835 g C m-2,是一个弱的碳汇.但与热带雨林相同周期固碳6720 g C m-2相比,仍为碳源.以上结果为深入了解橡胶种植对区域碳循环的影响提供了科学依据,建议当地政府一方面要有计划的对老胶林进行更新,以维持当前橡胶林生态系统中的碳平衡;另一方面要注重对热带雨林的保护,从而实现区域经济和生态环境保护的协调发展.%The carbon (C) cycle in rubber plantations,which are located in a suitable planting region (altitude 550-600 m) in Xishuangbanna,was simulated using the Biome-BGC model for the period 1959-2012.We obtained the following results.(1) Compared with the actual measurements,the accuracy was 98.37% and 90% for the simulated annual gross primary productivity (GPP) and total respiration (Rt),respectively.Because of an underestimate of GPP and an overestimate of Rt,the simulated annual net ecosystem exchange (NEE) was 157.35 g C m-2 a-1 lower than the measured value.However,the accuracy was greatly enhanced when dry rubber C stock (139 g C m-2 a-1) was taken into account.(2) During the initial 8 years,rubber plantation acted as a C source because of the higher

  12. [Temporal and spatial heterogeneity analysis of optimal value of sensitive parameters in ecological process model: The BIOME-BGC model as an example.

    Science.gov (United States)

    Li, Yi Zhe; Zhang, Ting Long; Liu, Qiu Yu; Li, Ying

    2018-01-01

    The ecological process models are powerful tools for studying terrestrial ecosystem water and carbon cycle at present. However, there are many parameters for these models, and weather the reasonable values of these parameters were taken, have important impact on the models simulation results. In the past, the sensitivity and the optimization of model parameters were analyzed and discussed in many researches. But the temporal and spatial heterogeneity of the optimal parameters is less concerned. In this paper, the BIOME-BGC model was used as an example. In the evergreen broad-leaved forest, deciduous broad-leaved forest and C3 grassland, the sensitive parameters of the model were selected by constructing the sensitivity judgment index with two experimental sites selected under each vegetation type. The objective function was constructed by using the simulated annealing algorithm combined with the flux data to obtain the monthly optimal values of the sensitive parameters at each site. Then we constructed the temporal heterogeneity judgment index, the spatial heterogeneity judgment index and the temporal and spatial heterogeneity judgment index to quantitatively analyze the temporal and spatial heterogeneity of the optimal values of the model sensitive parameters. The results showed that the sensitivity of BIOME-BGC model parameters was different under different vegetation types, but the selected sensitive parameters were mostly consistent. The optimal values of the sensitive parameters of BIOME-BGC model mostly presented time-space heterogeneity to different degrees which varied with vegetation types. The sensitive parameters related to vegetation physiology and ecology had relatively little temporal and spatial heterogeneity while those related to environment and phenology had generally larger temporal and spatial heterogeneity. In addition, the temporal heterogeneity of the optimal values of the model sensitive parameters showed a significant linear correlation

  13. Biomateriales para implantes intraóseos: contribución y desafío en el área biomédica

    OpenAIRE

    Guglielmotti, Maria Beatriz; Cabrini, R. L.; Olmedo, Daniel Gustavo; Universidad de Buenos Aires. Facultad de Odontología. Cátedra de Anatomía Patológica

    2017-01-01

    Los biomateriales son aquellos materiales diseñados para ser implantados o incorporados dentro del sistema vivo con el fin de sustituir o regenerar tejidos y sus funciones. Williams los define como aquellos materiales utilizados en dispositivos de uso biomédico diseñados para interactuar con los sistemas biológicos. Clásicamente los biomateriales se dividen en cuatro grupos: polímeros, metales, cerámicos y naturales. Cuando se combinan dos materiales diferentes se obtiene un material compuest...

  14. Combining in situ and laboratory measurements of soil-atmosphere carbonyl sulfide fluxes from four different biomes across Europe

    Science.gov (United States)

    Kitz, Florian; Gomez-Brandon, Maria; Hammerle, Albin; Spielmann, Felix M.; Insam, Heribert; Ibrom, Andreas; Migliavacca, Mirco; Moreno, Gerardo; Noe, Steffen M.; Wohlfahrt, Georg

    2017-04-01

    Flux partitioning, the quantification of photosynthesis and respiration, is a major uncertainty in modelling the carbon cycle and in times when robust models are needed to assess future global changes a persistent problem. A promising new approach is to derive gross primary production (GPP) from measurements of the carbonyl sulfide (COS) flux, the most abundant sulfur-containing trace gas in the atmosphere, with a mean concentration of about 500 pptv in the troposphere. This is possible because COS and CO2 enter the leaf via a similar pathway and are processed by the same enzyme (carbonic anhydrase). A prerequisite for using COS as a proxy for photosynthesis is a robust estimation of all non-leaf sources and sinks in an ecosystem. Past studies described soils either as a sink or source, depending on their properties like soil temperature and soil water content. In 2016 we conducted field campaigns in Austria (managed temperate mountain grassland), Spain (savannah), Denmark (temperate beech forest) and Estonia (hemiboreal forest) to estimate the soil-atmosphere COS fluxes under ambient conditions in different biomes. We used self-built fused silica soil chambers to avoid COS emissions from built-in materials and to assess the impact of radiation. At the grassland sites (Austria, Spain) vegetation was removed below the chambers, therefor more radiation reached the soil surface compared to natural conditions. The grassland sites were characterized by highly positive COS fluxes during daytime and COS fluxes around zero during nighttime. In contrast, the soils at the forest sites (Denmark, Estonia), characterized by less radiation on the soil surface, acted as a sink for COS. The impact of other abiotic factors, like soil water content and soil temperature, varied between the ecosystems. In addition to the field measurements soil and litter samples were taken at the study sites and used to measure COS fluxes under controlled conditions in the lab. Results from the

  15. Biome engineering-2020.

    Science.gov (United States)

    Brüssow, Harald

    2016-09-01

    The gut microbiome research is going from a descriptive into an intervention phase. To optimize beneficial microbe-host interaction, we need to understand how to steer the system by modulating the nutrient input with which the system is literally fed (e.g. diets, fibres, prebiotics, human milk oligosaccharides), and we must learn how to modulate the composition of the gut microbiota by adding beneficial microbes (e.g. probiotics, faecal transplants) and by eliminating disturbing microbial members using, for example, bacteriophages in this highly complex ecosystem. The current status of the field is reviewed together with an outlook what might be expected until 2020, highlighting obstacles to progress and possible solutions to these problems. © 2016 The Author. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

  16. A methodology for social experimentation

    DEFF Research Database (Denmark)

    Ravn, Ib

    A methodology is outlined whereby one may improve the performance of a social system to the satisfaction of its stakeholders, that is, facilitate desirable social and organizational transformations......A methodology is outlined whereby one may improve the performance of a social system to the satisfaction of its stakeholders, that is, facilitate desirable social and organizational transformations...

  17. Workshops as a Research Methodology

    Science.gov (United States)

    Ørngreen, Rikke; Levinsen, Karin

    2017-01-01

    This paper contributes to knowledge on workshops as a research methodology, and specifically on how such workshops pertain to e-learning. A literature review illustrated that workshops are discussed according to three different perspectives: workshops as a means, workshops as practice, and workshops as a research methodology. Focusing primarily on…

  18. Methodological Pluralism and Narrative Inquiry

    Science.gov (United States)

    Michie, Michael

    2013-01-01

    This paper considers how the integral theory model of Nancy Davis and Laurie Callihan might be enacted using a different qualitative methodology, in this case the narrative methodology. The focus of narrative research is shown to be on "what meaning is being made" rather than "what is happening here" (quadrant 2 rather than…

  19. Building ASIPS the Mescal methodology

    CERN Document Server

    Gries, Matthias

    2006-01-01

    A number of system designers use ASIP's rather than ASIC's to implement their system solutions. This book gives a comprehensive methodology for the design of these application-specific instruction processors (ASIPs). It includes demonstrations of applications of the methodologies using the Tipi research framework.

  20. A methodology for software documentation

    OpenAIRE

    Torres Júnior, Roberto Dias; Ahlert, Hubert

    2000-01-01

    With the growing complexity of window based software and the use of object-oriented, the development of software is getting more complex than ever. Based on that, this article intends to present a methodology for software documentation and to analyze our experience and how this methodology can aid the software maintenance