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Sample records for mer landing site

  1. Thermophysical properties of the MER and Beagle II landing site regions on Mars

    Science.gov (United States)

    Jakosky, Bruce M.; Hynek, Brian M.; Pelkey, Shannon M.; Mellon, Michael T.; Martínez-Alonso, Sara; Putzig, Nathaniel E.; Murphy, Nate; Christensen, Philip R.

    2006-08-01

    We analyzed remote-sensing observations of the Isidis Basin, Gusev Crater, and Meridiani Planum landing sites for Beagle II, MER-A Spirit, and MER-B Opportunity spacecraft, respectively. We emphasized the thermophysical properties using daytime and nighttime radiance measurements from the Mars Global Surveyor (MGS) Thermal Emission Spectrometer and Mars Odyssey Thermal Emission Imaging System (THEMIS) and thermal inertias derived from nighttime data sets. THEMIS visible images, MGS Mars Orbiter Camera (MOC) narrow-angle images, and MGS Mars Orbiter Laser Altimeter (MOLA) data are incorporated as well. Additionally, the remote-sensing data were compared with ground-truth at the MER sites. The Isidis Basin surface layer has been shaped by aeolian processes and erosion by slope winds coming off of the southern highlands and funneling through notches between massifs. In the Gusev region, surface materials of contrasting thermophysical properties have been interpreted as rocks or bedrock, duricrust, and dust deposits; these are consistent with a complex geological history dominated by volcanic and aeolian processes. At Meridiani Planum the many layers having different thermophysical and erosional properties suggest periodic deposition of differing sedimentological facies possibly related to clast size, grain orientation and packing, or mineralogy.

  2. Seasonal and interannual variability of solar radiation at Spirit, Opportunity and Curiosity landing sites

    International Nuclear Information System (INIS)

    Vicente-Retortillo, A.; Lemmon, M.T.; Martinez, G.; Valero, F.; Vazquez, L.; Martin, M.L.

    2016-01-01

    In this article we characterize the radiative environment at the landing sites of NASA's Mars Exploration Rover (MER) and Mars Science Laboratory (MSL) missions. We use opacity values obtained at the surface from direct imaging of the Sun and our radiative transfer model COMIMART to analyze the seasonal and interannual variability of the daily irradiation at the MER and MSL landing sites. In addition, we analyze the behavior of the direct and diffuse components of the solar radiation at these landing sites. (Author)

  3. Seasonal and interannual variability of solar radiation at Spirit, Opportunity and Curiosity landing sites

    Energy Technology Data Exchange (ETDEWEB)

    Vicente-Retortillo, A.; Lemmon, M.T.; Martinez, G.; Valero, F.; Vazquez, L.; Martin, M.L.

    2016-07-01

    In this article we characterize the radiative environment at the landing sites of NASA's Mars Exploration Rover (MER) and Mars Science Laboratory (MSL) missions. We use opacity values obtained at the surface from direct imaging of the Sun and our radiative transfer model COMIMART to analyze the seasonal and interannual variability of the daily irradiation at the MER and MSL landing sites. In addition, we analyze the behavior of the direct and diffuse components of the solar radiation at these landing sites. (Author)

  4. Conserved antigenic sites between MERS-CoV and Bat-coronavirus are revealed through sequence analysis.

    Science.gov (United States)

    Sharmin, Refat; Islam, Abul B M M K

    2016-01-01

    MERS-CoV is a newly emerged human coronavirus reported closely related with HKU4 and HKU5 Bat coronaviruses. Bat and MERS corona-viruses are structurally related. Therefore, it is of interest to estimate the degree of conserved antigenic sites among them. It is of importance to elucidate the shared antigenic-sites and extent of conservation between them to understand the evolutionary dynamics of MERS-CoV. Multiple sequence alignment of the spike (S), membrane (M), enveloped (E) and nucleocapsid (N) proteins was employed to identify the sequence conservation among MERS and Bat (HKU4, HKU5) coronaviruses. We used various in silico tools to predict the conserved antigenic sites. We found that MERS-CoV shared 30 % of its S protein antigenic sites with HKU4 and 70 % with HKU5 bat-CoV. Whereas 100 % of its E, M and N protein's antigenic sites are found to be conserved with those in HKU4 and HKU5. This sharing suggests that in case of pathogenicity MERS-CoV is more closely related to HKU5 bat-CoV than HKU4 bat-CoV. The conserved epitopes indicates their evolutionary relationship and ancestry of pathogenicity.

  5. Robust k-mer frequency estimation using gapped k-mers.

    Science.gov (United States)

    Ghandi, Mahmoud; Mohammad-Noori, Morteza; Beer, Michael A

    2014-08-01

    Oligomers of fixed length, k, commonly known as k-mers, are often used as fundamental elements in the description of DNA sequence features of diverse biological function, or as intermediate elements in the constuction of more complex descriptors of sequence features such as position weight matrices. k-mers are very useful as general sequence features because they constitute a complete and unbiased feature set, and do not require parameterization based on incomplete knowledge of biological mechanisms. However, a fundamental limitation in the use of k-mers as sequence features is that as k is increased, larger spatial correlations in DNA sequence elements can be described, but the frequency of observing any specific k-mer becomes very small, and rapidly approaches a sparse matrix of binary counts. Thus any statistical learning approach using k-mers will be susceptible to noisy estimation of k-mer frequencies once k becomes large. Because all molecular DNA interactions have limited spatial extent, gapped k-mers often carry the relevant biological signal. Here we use gapped k-mer counts to more robustly estimate the ungapped k-mer frequencies, by deriving an equation for the minimum norm estimate of k-mer frequencies given an observed set of gapped k-mer frequencies. We demonstrate that this approach provides a more accurate estimate of the k-mer frequencies in real biological sequences using a sample of CTCF binding sites in the human genome.

  6. Physical Properties of the MER and Beagle II Landing Sites on Mars

    Science.gov (United States)

    Jakosky, B. M.; Pelkey, S. M.; Mellon, M. T.; Putzig, N.; Martinez-Alonso, S.; Murphy, N.; Hynek, B.

    2003-12-01

    The ESA Beagle II and the NASA Mars Exploration Rover spacecraft are scheduled to land on the martian surface in December 2003 and January 2004, respectively. Mission operations and success depends on the physical properties of the surfaces on which they land. Surface structural characteristics such as the abundances of loose, unconsolidated fine material, of fine material that has been cemented into a duricrust, and of rocks affect the ability to safely land and to successfully sample and traverse the surface. Also, physical properties affect surface and atmospheric temperatures, which affect lander and rover functionality. We are in the process of analyzing surface temperature information for these sites, derived from MGS TES and Odyssey THEMIS daytime and nighttime measurements. Our approach is to: (i) remap thermal inertia using TES data at ~3-km resolution, to obtain the most complete coverage possible; (ii) interpret physical properties from TES coverage in conjunction with other remote-sensing data sets; (iii) map infrared brightness using daytime and nighttime THEMIS data at 100-m resolution, and do qualitative analysis of physical properties and processes; and (iv) derive thermal inertia from THEMIS nighttime data in conjunction with daytime albedo measurements derived from TES, THEMIS, and MOC observations. In addition, we will use measured temperatures and derived thermal inertia to predict surface temperatures for the periods of the missions.

  7. Determination of chemical composition of soils and rocks at the MER landing sites Gusev crater and Meridiani Planum using the APXS

    Science.gov (United States)

    Brueckner, J.

    2004-05-01

    The new Alpha Particle X-Ray Spectrometer (APXS) is a small, light-weight instrument to obtain x-ray spectra from Martian surface samples. The sensor head contains a high-resolution x-ray detector that is surrounded by a circle of radioactive Cm-244 sources. Alpha and x-ray radiation emitted by the sources is used to induce x-ray excitation in the sample. Elements from sodium to zinc (increasing by atomic weight) are detected and their concentrations determined. The APXS is mounted on each Instrument Deployment Device (IDD) of the two Mars Exploration Rovers (MER) Spirit and Opportunity. Rover Spirit landed in the large Gusev crater that seems to have been altered by water activities in the past based on evidence of orbital images. Rover Opportunity landed in a very small crater of the Meridiani Planum, where the mineral hematite that points to water-related processes is expected to be found. Inside the little crater, a light-colored outcrop is exposed that shows widespread fine layering. The first APXS high-resolution x-ray spectrum of a Gusev soil indicated many similarities to the composition of the Mars Pathfinder (MPF) and Viking soils. However, differences are also noticeable: Low-Z elements are somewhat higher compared to MPF soils, while high-Z elements are depleted, notably Ti. Potassium in the soils reflects the K concentration of the local rocks at the different landing sites pointing toward a local contribution to the soil's composition. The Rock Abrasion Tool was used to grind the first rock on Mars at Gusev: Adirondack's undisturbed and ground surface was measured by the APXS. The composition of its fresh surface is different from the MPF soilfree rock, noticeably in Mg and Al, and clearly exhibits a basaltic nature related to the composition of basaltic shergottites. The first rock at the Meridiani crater outcrop (dubbed Robert-E) exhibited a very high sulfur concentration, more than a factor of 15 compared to rock Adirondack, indicating it is

  8. A camel-derived MERS-CoV with a variant spike protein cleavage site and distinct fusion activation properties

    Science.gov (United States)

    Millet, Jean Kaoru; Goldstein, Monty E; Labitt, Rachael N; Hsu, Hung-Lun; Daniel, Susan; Whittaker, Gary R

    2016-01-01

    Middle East respiratory syndrome coronavirus (MERS-CoV) continues to circulate in both humans and camels, and the origin and evolution of the virus remain unclear. Here we characterize the spike protein of a camel-derived MERS-CoV (NRCE-HKU205) identified in 2013, early in the MERS outbreak. NRCE-HKU205 spike protein has a variant cleavage motif with regard to the S2′ fusion activation site—notably, a novel substitution of isoleucine for the otherwise invariant serine at the critical P1′ cleavage site position. The substitutions resulted in a loss of furin-mediated cleavage, as shown by fluorogenic peptide cleavage and western blot assays. Cell–cell fusion and pseudotyped virus infectivity assays demonstrated that the S2′ substitutions decreased spike-mediated fusion and viral entry. However, cathepsin and trypsin-like protease activation were retained, albeit with much reduced efficiency compared with the prototypical EMC/2012 human strain. We show that NRCE-HKU205 has more limited fusion activation properties possibly resulting in more restricted viral tropism and may represent an intermediate in the complex pattern of MERS-CoV ecology and evolution. PMID:27999426

  9. Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg-Carbon Bond Cleavage and Metal Binding Specificity.

    Science.gov (United States)

    Wahba, Haytham M; Lecoq, Lauriane; Stevenson, Michael; Mansour, Ahmed; Cappadocia, Laurent; Lafrance-Vanasse, Julien; Wilkinson, Kevin J; Sygusch, Jurgen; Wilcox, Dean E; Omichinski, James G

    2016-02-23

    In bacterial resistance to mercury, the organomercurial lyase (MerB) plays a key role in the detoxification pathway through its ability to cleave Hg-carbon bonds. Two cysteines (C96 and C159; Escherichia coli MerB numbering) and an aspartic acid (D99) have been identified as the key catalytic residues, and these three residues are conserved in all but four known MerB variants, where the aspartic acid is replaced with a serine. To understand the role of the active site serine, we characterized the structure and metal binding properties of an E. coli MerB mutant with a serine substituted for D99 (MerB D99S) as well as one of the native MerB variants containing a serine residue in the active site (Bacillus megaterium MerB2). Surprisingly, the MerB D99S protein copurified with a bound metal that was determined to be Cu(II) from UV-vis absorption, inductively coupled plasma mass spectrometry, nuclear magnetic resonance, and electron paramagnetic resonance studies. X-ray structural studies revealed that the Cu(II) is bound to the active site cysteine residues of MerB D99S, but that it is displaced following the addition of either an organomercurial substrate or an ionic mercury product. In contrast, the B. megaterium MerB2 protein does not copurify with copper, but the structure of the B. megaterium MerB2-Hg complex is highly similar to the structure of the MerB D99S-Hg complexes. These results demonstrate that the active site aspartic acid is crucial for both the enzymatic activity and metal binding specificity of MerB proteins and suggest a possible functional relationship between MerB and its only known structural homologue, the copper-binding protein NosL.

  10. Critical Spacecraft-to-Earth Communications for Mars Exploration Rover (MER) entry, descent and landing

    Science.gov (United States)

    Hurd, William J.; Estabrook, Polly; Racho, Caroline S.; Satorius, Edgar H.

    2002-01-01

    For planetary lander missions, the most challenging phase of the spacecraft to ground communications is during the entry, descent, and landing (EDL). As each 2003 Mars Exploration Rover (MER) enters the Martian atmosphere, it slows dramatically. The extreme acceleration and jerk cause extreme Doppler dynamics on the X-band signal received on Earth. When the vehicle slows sufficiently, the parachute is deployed, causing almost a step in deceleration. After parachute deployment, the lander is lowered beneath the parachute on a bridle. The swinging motion of the lander imparts high Doppler dynamics on the signal and causes the received signal strength to vary widely, due to changing antenna pointing angles. All this time, the vehicle transmits important health and status information that is especially critical if the landing is not successful. Even using the largest Deep Space Network antennas, the weak signal and high dynamics render it impossible to conduct reliable phase coherent communications. Therefore, a specialized form of frequency-shift-keying will be used. This paper describes the EDL scenario, the signal conditions, the methods used to detect and frequency-track the carrier and to detect the data modulation, and the resulting performance estimates.

  11. MER SPICE Interface

    Science.gov (United States)

    Sayfi, Elias

    2004-01-01

    MER SPICE Interface is a software module for use in conjunction with the Mars Exploration Rover (MER) mission and the SPICE software system of the Navigation and Ancillary Information Facility (NAIF) at NASA's Jet Propulsion Laboratory. (SPICE is used to acquire, record, and disseminate engineering, navigational, and other ancillary data describing circumstances under which data were acquired by spaceborne scientific instruments.) Given a Spacecraft Clock value, MER SPICE Interface extracts MER-specific data from SPICE kernels (essentially, raw data files) and calculates values for Planet Day Number, Local Solar Longitude, Local Solar Elevation, Local Solar Azimuth, and Local Solar Time (UTC). MER SPICE Interface was adapted from a subroutine, denoted m98SpiceIF written by Payam Zamani, that was intended to calculate SPICE values for the Mars Polar Lander. The main difference between MER SPICE Interface and m98SpiceIf is that MER SPICE Interface does not explicitly call CHRONOS, a time-conversion program that is part of a library of utility subprograms within SPICE. Instead, MER SPICE Interface mimics some portions of the CHRONOS code, the advantage being that it executes much faster and can efficiently be called from a pipeline of events in a parallel processing environment.

  12. Generation of NSE-MerCreMer transgenic mice with tamoxifen inducible Cre activity in neurons.

    Directory of Open Access Journals (Sweden)

    Mandy Ka Man Kam

    Full Text Available To establish a genetic tool for conditional deletion or expression of gene in neurons in a temporally controlled manner, we generated a transgenic mouse (NSE-MerCreMer, which expressed a tamoxifen inducible type of Cre recombinase specifically in neurons. The tamoxifen inducible Cre recombinase (MerCreMer is a fusion protein containing Cre recombinase with two modified estrogen receptor ligand binding domains at both ends, and is driven by the neural-specific rat neural specific enolase (NSE promoter. A total of two transgenic lines were established, and expression of MerCreMer in neurons of the central and enteric nervous systems was confirmed. Transcript of MerCreMer was detected in several non-neural tissues such as heart, liver, and kidney in these lines. In the background of the Cre reporter mouse strain Rosa26R, Cre recombinase activity was inducible in neurons of adult NSE-MerCreMer mice treated with tamoxifen by intragastric gavage, but not in those fed with corn oil only. We conclude that NSE-MerCreMer lines will be useful for studying gene functions in neurons for the conditions that Cre-mediated recombination resulting in embryonic lethality, which precludes investigation of gene functions in neurons through later stages of development and in adult.

  13. LANDSAFE: LANDING SITE RISK ANALYSIS SOFTWARE FRAMEWORK

    Directory of Open Access Journals (Sweden)

    R. Schmidt

    2012-08-01

    Full Text Available The European Space Agency (ESA is planning a Lunar Lander mission in the 2018 timeframe that will demonstrate precise soft landing at the polar regions of the Moon. To ensure a safe and successful landing a careful risk analysis has to be carried out. This is comprised of identifying favorable target areas and evaluating the surface conditions in these areas. Features like craters, boulders, steep slopes, rough surfaces and shadow areas have to be identified in order to assess the risk associated to a landing site in terms of a successful touchdown and subsequent surface operation of the lander. In addition, global illumination conditions at the landing site have to be simulated and analyzed. The Landing Site Risk Analysis software framework (LandSAfe is a system for the analysis, selection and certification of safe landing sites on the lunar surface. LandSAfe generates several data products including high resolution digital terrain models (DTMs, hazard maps, illumination maps, temperature maps and surface reflectance maps which assist the user in evaluating potential landing site candidates. This paper presents the LandSAfe system and describes the methods and products of the different modules. For one candidate landing site on the rim of Shackleton crater at the south pole of the Moon a high resolution DTM is showcased.

  14. Implementation of hierarchical clustering using k-mer sparse matrix to analyze MERS-CoV genetic relationship

    Science.gov (United States)

    Bustamam, A.; Ulul, E. D.; Hura, H. F. A.; Siswantining, T.

    2017-07-01

    Hierarchical clustering is one of effective methods in creating a phylogenetic tree based on the distance matrix between DNA (deoxyribonucleic acid) sequences. One of the well-known methods to calculate the distance matrix is k-mer method. Generally, k-mer is more efficient than some distance matrix calculation techniques. The steps of k-mer method are started from creating k-mer sparse matrix, and followed by creating k-mer singular value vectors. The last step is computing the distance amongst vectors. In this paper, we analyze the sequences of MERS-CoV (Middle East Respiratory Syndrome - Coronavirus) DNA by implementing hierarchical clustering using k-mer sparse matrix in order to perform the phylogenetic analysis. Our results show that the ancestor of our MERS-CoV is coming from Egypt. Moreover, we found that the MERS-CoV infection that occurs in one country may not necessarily come from the same country of origin. This suggests that the process of MERS-CoV mutation might not only be influenced by geographical factor.

  15. Maps of the Martian Landing Sites and Rover Traverses: Viking 1 and 2, Mars Pathfinder, and Phoenix Landers, and the Mars Exploration Rovers.

    Science.gov (United States)

    Parker, T. J.; Calef, F. J., III; Deen, R. G.; Gengl, H.

    2016-12-01

    The traverse maps produced tactically for the MER and MSL rover missions are the first step in placing the observations made by each vehicle into a local and regional geologic context. For the MER, Phoenix and MSL missions, 25cm/pixel HiRISE data is available for accurately localizing the vehicles. Viking and Mars Pathfinder, however, relied on Viking Orbiter images of several tens of m/pixel to triangulate to horizon features visible both from the ground and from orbit. After Pathfinder, MGS MOC images became available for these landing sites, enabling much better correlations to horizon features and localization predictions to be made, that were then corroborated with HiRISE images beginning 9 years ago. By combining topography data from MGS, Mars Express, and stereo processing of MRO CTX and HiRISE images into orthomosaics (ORRs) and digital elevation models (DEMs), it is possible to localize all the landers and rover positions to an accuracy of a few tens of meters with respect to the Mars global control net, and to better than half a meter with respect to other features within a HiRISE orthomosaic. JPL's MIPL produces point clouds of the MER Navcam stereo images that can be processed into 1cm/pixel ORR/DEMs that are then georeferenced to a HiRISE/CTX base map and DEM. This allows compilation of seamless mosaics of the lander and rover camera-based ORR/DEMs with the HiRISE ORR/DEM that can be viewed in 3 dimensions with GIS programs with that capability. We are re-processing the Viking Lander, Mars Pathfinder, and Phoenix lander data to allow similar ORR/DEM products to be made for those missions. For the fixed landers and Spirit, we will compile merged surface/CTX/HiRISE ORR/DEMs, that will enable accurate local and regional mapping of these landing sites, and allow comparisons of the results from these missions to be made with current and future surface missions.

  16. The viking landing sites: selection and certification.

    Science.gov (United States)

    Masursky, H; Crabill, N L

    1976-08-27

    During the past several years the Viking project developed plans to use Viking orbiter instruments and Earth-based radar to certify the suitability of the landing sites selected as the safest and most scientifically rewarding using Mariner 9 data. During June and July 1976, the Earth-based radar and orbital spacecraft observations of some of the prime and backup sites were completed. The results of these combined observations indicated that the Viking 1 prime landing area in the Chryse region of Mars is geologically varied and possibly more hazardous than expected, and was not certifiable as a site for the Viking 1 landing. Consequently, the site certification effort had to be drastically modified and lengthened to search for a site that might be safe enough to attempt to land. The selected site considered at 47.5 degrees W, 22.4 degrees N represented a compromise between desirable characteristics observed with visual images and those inferred from Earth-based radar. It lies in the Chryse region about 900 kilometers northwest of the original site. Viking 1 landed successfully at this site on 20 July 1976.

  17. Rapid detection of MERS coronavirus-like viruses in bats: pote1ntial for tracking MERS coronavirus transmission and animal origin.

    Science.gov (United States)

    Woo, Patrick C Y; Lau, Susanna K P; Chen, Yixin; Wong, Emily Y M; Chan, Kwok-Hung; Chen, Honglin; Zhang, Libiao; Xia, Ningshao; Yuen, Kwok-Yung

    2018-03-07

    Recently, we developed a monoclonal antibody-based rapid nucleocapsid protein detection assay for diagnosis of MERS coronavirus (MERS-CoV) in humans and dromedary camels. In this study, we examined the usefulness of this assay to detect other lineage C betacoronaviruses closely related to MERS-CoV in bats. The rapid MERS-CoV nucleocapsid protein detection assay was tested positive in 24 (88.9%) of 27 Tylonycteris bat CoV HKU4 (Ty-BatCoV-HKU4) RNA-positive alimentary samples of Tylonycteris pachypus and 4 (19.0%) of 21 Pipistrellus bat CoV HKU5 (Pi-BatCoV-HKU5) RNA-positive alimentary samples of Pipistrellus abramus. There was significantly more Ty-BatCoV-HKU4 RNA-positive alimentary samples than Pi-BatCoV-HKU5 RNA-positive alimentary samples that were tested positive by the rapid MERS-CoV nucleocapsid protein detection assay (P < 0.001 by Chi-square test). The rapid assay was tested negative in all 51 alimentary samples RNA-positive for alphacoronaviruses (Rhinolophus bat CoV HKU2, Myotis bat CoV HKU6, Miniopterus bat CoV HKU8 and Hipposideros batCoV HKU10) and 32 alimentary samples positive for lineage B (SARS-related Rhinolophus bat CoV HKU3) and lineage D (Rousettus bat CoV HKU9) betacoronaviruses. No significant difference was observed between the viral loads of Ty-BatCoV-HKU4/Pi-BatCoV-HKU5 RNA-positive alimentary samples that were tested positive and negative by the rapid test (Mann-Witney U test). The rapid MERS-CoV nucleocapsid protein detection assay is able to rapidly detect lineage C betacoronaviruses in bats. It detected significantly more Ty-BatCoV-HKU4 than Pi-BatCoV-HKU5 because MERS-CoV is more closely related to Ty-BatCoV-HKU4 than Pi-BatCoV-HKU5. This assay will facilitate rapid on-site mass screening of animal samples for ancestors of MERS-CoV and tracking transmission in the related bat species.

  18. Engineering MerR for Sequestration and MerA for Reduction of Toxic Metals and Radionuclides

    International Nuclear Information System (INIS)

    Summers, Anne O.

    2008-01-01

    The objectives of this project were (1) to alter a metalloregulatory protein (MerR) so that it would bind other toxic metals or radionuclides with similar affinity so that the engineered protein itself and/or bacteria expressing it could be deployed in the environment to specifically sequester such metals and (2) to alter the mercuric reductase, MerA, to reduce radionuclides and render them less mobile. Both projects had a basic science component. In the first case, such information about MerR illuminates how proteins discriminate very similar metals/elements. In the second case, information about MerA reveals the criteria for transmission of reducing equivalents from NADPH to redox-active metals. The work involved genetic engineering of all or parts of both proteins and examination of their resultant properties both in vivo and in vitro, the latter with biochemical and biophysical tools including equilibrium and non-equilibrium dialysis, XAFS, NMR, x-ray crystallography, and titration calorimetry. We defined the basis for metal specificity in MerR, devised a bacterial strain that sequesters Hg while growing, characterized gold reduction by MerA and the role of the metallochaperone domain of MerA, and determined the 3-D structure of MerB, the organomercurial lyase.

  19. Enzymatic Mercury Detoxification: The Regulatory Protein MerR

    CERN Multimedia

    Ctortecka, B; Walsh, C T; Comess, K M

    2002-01-01

    Mercury ions and organomercurial reagents are extremely toxic due to their affinity for thiol groups. Many bacteria contain an elaborate detoxification system for a metabolic conversion of toxic Hg$^{2+}$ or organomercurials to less toxic elemental Hg$^0$. The main components of the enzymatic mercury detoxification (see Fig. 1) are the regulatory protein MerR (mercury responsive genetic switch), the organomercurial lyase MerB (cleavage of carbon mercury bonds), and the mercuric ion reductase MerA (reduction of mercuric ions). In these proteins Hg$^{2+}$ is usually coordinated by the thiol groups of cysteines. We utilize the nuclear quadrupole interaction (NQI) of ${\\rm^{199m}}$Hg detected by time differential perturbed angular correlation (TDPAC) to identify the Hg metal site geometries in these proteins in order to elucidate the molecular origin of the ultrasensitivity, selectivity and reaction mechanism of this detoxification system. The short lived TDPAC probe ${\\rm^{199m}}$Hg ($\\tau_{1/2} =$ 43 min) is su...

  20. Surveillance of the Middle East respiratory syndrome (MERS) coronavirus (CoV) infection in healthcare workers after contact with confirmed MERS patients: incidence and risk factors of MERS-CoV seropositivity.

    Science.gov (United States)

    Kim, C-J; Choi, W S; Jung, Y; Kiem, S; Seol, H Y; Woo, H J; Choi, Y H; Son, J S; Kim, K-H; Kim, Y-S; Kim, E S; Park, S H; Yoon, J H; Choi, S-M; Lee, H; Oh, W S; Choi, S-Y; Kim, N-J; Choi, J-P; Park, S Y; Kim, J; Jeong, S J; Lee, K S; Jang, H C; Rhee, J Y; Kim, B-N; Bang, J H; Lee, J H; Park, S; Kim, H Y; Choi, J K; Wi, Y-M; Choi, H J

    2016-10-01

    Given the mode of transmission of Middle East respiratory syndrome (MERS), healthcare workers (HCWs) in contact with MERS patients are expected to be at risk of MERS infections. We evaluated the prevalence of MERS coronavirus (CoV) immunoglobulin (Ig) G in HCWs exposed to MERS patients and calculated the incidence of MERS-affected cases in HCWs. We enrolled HCWs from hospitals where confirmed MERS patients had visited. Serum was collected 4 to 6 weeks after the last contact with a confirmed MERS patient. We performed an enzyme-linked immunosorbent assay (ELISA) to screen for the presence of MERS-CoV IgG and an indirect immunofluorescence test (IIFT) to confirm MERS-CoV IgG. We used a questionnaire to collect information regarding the exposure. We calculated the incidence of MERS-affected cases by dividing the sum of PCR-confirmed and serology-confirmed cases by the number of exposed HCWs in participating hospitals. In total, 1169 HCWs in 31 hospitals had contact with 114 MERS patients, and among the HCWs, 15 were PCR-confirmed MERS cases in study hospitals. Serologic analysis was performed for 737 participants. ELISA was positive in five participants and borderline for seven. IIFT was positive for two (0.3%) of these 12 participants. Among the participants who did not use appropriate personal protective equipment (PPE), seropositivity was 0.7% (2/294) compared to 0% (0/443) in cases with appropriate PPE use. The incidence of MERS infection in HCWs was 1.5% (17/1169). The seroprevalence of MERS-CoV IgG among HCWs was higher among participants who did not use appropriate PPE. Copyright © 2016. Published by Elsevier Ltd.

  1. Environmental Contamination and Viral Shedding in MERS Patients During MERS-CoV Outbreak in South Korea.

    Science.gov (United States)

    Bin, Seo Yu; Heo, Jung Yeon; Song, Min-Suk; Lee, Jacob; Kim, Eun-Ha; Park, Su-Jin; Kwon, Hyeok-Il; Kim, Se Mi; Kim, Young-Il; Si, Young-Jae; Lee, In-Won; Baek, Yun Hee; Choi, Won-Suk; Min, Jinsoo; Jeong, Hye Won; Choi, Young Ki

    2016-03-15

    Although Middle East Respiratory Syndrome coronavirus (MERS-CoV) is characterized by a risk of nosocomial transmission, the detailed mode of transmission and period of virus shedding from infected patients are poorly understood. The aims of this study were to investigate the potential role of environmental contamination by MERS-CoV in healthcare settings and to define the period of viable virus shedding from MERS patients. We investigated environmental contamination from 4 patients in MERS-CoV units of 2 hospitals. MERS-CoV was detected by reverse transcription polymerase chain reaction (PCR) and viable virus was isolated by cultures. Many environmental surfaces of MERS patient rooms, including points frequently touched by patients or healthcare workers, were contaminated by MERS-CoV. Viral RNA was detected up to five days from environmental surfaces following the last positive PCR from patients' respiratory specimens. MERS-CoV RNA was detected in samples from anterooms, medical devices, and air-ventilating equipment. In addition, MERS-CoV was isolated from environmental objects such as bed sheets, bedrails, IV fluid hangers, and X-ray devices. During the late clinical phase of MERS, viable virus could be isolated in 3 of the 4 enrolled patients on day 18 to day 25 after symptom onset. Most of touchable surfaces in MERS units were contaminated by patients and health care workers and the viable virus could shed through respiratory secretion from clinically fully recovered patients. These results emphasize the need for strict environmental surface hygiene practices, and sufficient isolation period based on laboratory results rather than solely on clinical symptoms. © The Author 2015. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail journals.permissions@oup.com.

  2. Accessing Martian Fluvial and Lacustrine Sediments by Landing in Holden Crater, Margaritifer Sinus

    Science.gov (United States)

    Parker, T. J.; Grant, J. A.

    2001-01-01

    Rover missions to the surface of Mars after MER 2003, are likely to be centered around focused geologic field mapping. One objective with high priority in selecting landing sites for these missions will be to characterize the nature, spatial distribution, internal structure, composition, and depositional history of exposed sedimentary layered deposits by visiting a number of distributed outcrops identified previously (and with a high degree of certainty) from orbit. These deposits may contain prebiotic material, even fossil organisms, but their primary value will be to enable an assessment of the planet's climate at the time they were emplaced. High resolution imaging from a mobile rover will enable the detailed study of these deposits over a wide area, their internal structure and mineralogy at distributed localities, and could resolve biologically-derived structures (such as stromatolite-like textures) if they are present. With the addition of a spectrometer, it should be possible to ascertain the presence of carbonates, sulfates, organics, water (liquid, frost, and bound water), as well as a variety of silicate minerals in the context of the collected imagery. Such a mission approach is directly relevant to future exploration of Mars, because it provides the geologic context comparable to what a field geologist visiting a site for the first time would acquire. Rover missions after MER will likely have much better targeting and hazard avoidance landing systems, enabling access to planimetrically-challenged sites of high scientific interest. These vehicles will also likely have greater mobility than MER, capable of driving greater distances in a shorter amount of time. Many scientists and mission planners have realized the need to design a rover whose mobility can be comparable to the dimensions of its 3-sigma landing error ellipse.

  3. How to find the Apollo landing sites

    CERN Document Server

    Chen, James L

    2014-01-01

    This book is for anyone who wants to be able to connect the history of lunar exploration to the Moon visible above. It addresses what Apollo equipment and experiments were left behind and what the Apollo landings sites look like now. Each Apollo mission is examined in detail, with photos that progressively zoom-in to guide the reader in locating the Apollo landing sites. Guided by official NASA photographs from the Lunar Reconnaissance Orbiter and the original Apollo missions, the reader can view the Moon with a new appreciation of the accomplishment of landing astronauts on its surface.  Countless people have gazed at the Moon in the night sky knowing the successes of the Apollo Program in landing men on the Moon. After the information in this guide, casual and serious observers can actually point out where the Apollo landings occurred as well as knowing why those sites were chosen.

  4. Sur terre comme sur mer: organisations spatiales en mer du Nord et mer de Norvège

    Directory of Open Access Journals (Sweden)

    Maryvonne LE BERRE

    1998-09-01

    Full Text Available L'article montre, au moyen de représentations cartographiques et graphiques, les structures spatiales développées en mer pour l'exploitation des hydrocarbures. Malgré les différences de milieu, l'appropriation et l'occupation territoriales du domaine maritime s'effectuent selon les mêmes principes que sur le continent, à ceci près que ce qui s'étale en surface sur le continent se développe à la verticale en mer.

  5. Extensive Viable Middle East Respiratory Syndrome (MERS) Coronavirus Contamination in Air and Surrounding Environment in MERS Isolation Wards.

    Science.gov (United States)

    Kim, Sung-Han; Chang, So Young; Sung, Minki; Park, Ji Hoon; Bin Kim, Hong; Lee, Heeyoung; Choi, Jae-Phil; Choi, Won Suk; Min, Ji-Young

    2016-08-01

    The largest outbreak of Middle East respiratory syndrome coronavirus (MERS-CoV) outside the Middle East occurred in South Korea in 2015 and resulted in 186 laboratory-confirmed infections, including 36 (19%) deaths. Some hospitals were considered epicenters of infection and voluntarily shut down most of their operations after nearly half of all transmissions occurred in hospital settings. However, the ways that MERS-CoV is transmitted in healthcare settings are not well defined. We explored the possible contribution of contaminated hospital air and surfaces to MERS transmission by collecting air and swabbing environmental surfaces in 2 hospitals treating MERS-CoV patients. The samples were tested by viral culture with reverse transcription polymerase chain reaction (RT-PCR) and immunofluorescence assay (IFA) using MERS-CoV Spike antibody, and electron microscopy (EM). The presence of MERS-CoV was confirmed by RT-PCR of viral cultures of 4 of 7 air samples from 2 patients' rooms, 1 patient's restroom, and 1 common corridor. In addition, MERS-CoV was detected in 15 of 68 surface swabs by viral cultures. IFA on the cultures of the air and swab samples revealed the presence of MERS-CoV. EM images also revealed intact particles of MERS-CoV in viral cultures of the air and swab samples. These data provide experimental evidence for extensive viable MERS-CoV contamination of the air and surrounding materials in MERS outbreak units. Thus, our findings call for epidemiologic investigation of the possible scenarios for contact and airborne transmission, and raise concern regarding the adequacy of current infection control procedures. © The Author 2016. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail journals.permissions@oup.com.

  6. Assessment of Mars Exploration Rover Landing Site Predictions

    Science.gov (United States)

    Golombek, M. P.

    2005-05-01

    Comprehensive analyses of remote sensing data during the 3-year effort to select the Mars Exploration Rover landing sites at Gusev crater and Meridiani Planum correctly predicted the safe and trafficable surfaces explored by the two rovers. Gusev crater was predicted to be a relatively low relief surface that was comparably dusty, but less rocky than the Viking landing sites. Available data for Meridiani Planum indicated a very flat plain composed of basaltic sand to granules and hematite that would look completely unlike any of the existing landing sites with a dark, low albedo surface, little dust and very few rocks. Orbital thermal inertia measurements of 315 J m-2 s-0.5 K-1 at Gusev suggested surfaces dominated by duricrust to cemented soil-like materials or cohesionless sand or granules, which is consistent with observed soil characteristics and measured thermal inertias from the surface. THEMIS thermal inertias along the traverse at Gusev vary from 285 at the landing site to 330 around Bonneville rim and show systematic variations that can be related to the observed increase in rock abundance (5-30%). Meridiani has an orbital bulk inertia of ~200, similar to measured surface inertias that correspond to observed surfaces dominated by 0.2 mm sand size particles. Rock abundance derived from orbital thermal differencing techniques suggested that Meridiani Planum would have very low rock abundance, consistent with the rock free plain traversed by Opportunity. Spirit landed in an 8% orbital rock abundance pixel, consistent with the measured 7% of the surface covered by rocks >0.04 m diameter at the landing site, which is representative of the plains away from craters. The orbital albedo of the Spirit traverse varies from 0.19 to 0.30, consistent with surface measurements in and out of dust devil tracks. Opportunity is the first landing in a low albedo portion of Mars as seen from orbit, which is consistent with the dark, dust-free surface and measured albedos. The

  7. Middle East Respiratory Syndrome (MERS)

    Science.gov (United States)

    Middle East Respiratory Syndrome Coronavirus; MERS-CoV; Novel coronavirus; nCoV ... for Disease Control and Prevention website. Middle East Respiratory Syndrome (MERS): Frequently asked questions and answers. www. ...

  8. Opportune Landing Site Program: Opportune Landing Site Southeastern Indiana Field Data Collection and Assessment

    National Research Council Canada - National Science Library

    Barna, Lynette A; Ryerson, Charles C; Affleck, Rosa T

    2008-01-01

    .... The opportune landing site (OLS) program utilized existing technologies to rapidly accelerate the process of selecting OLSs using remote sensing technology and state-of-the-ground forecast tools...

  9. Land-use trends related to Natura2000 sites in Denmark

    DEFF Research Database (Denmark)

    Levin, Gregor; Nainggolan, Doan; Frederiksen, Pia

    2018-01-01

    EU-member states are obliged to designate Natura2000 sites for habitat protection. Natura2000 sites comprise approximately 18 percent of the terrestrial area of the EU. On average, around 22 percent of Natura2000 sites are covered by agricultural land use, such as intensive cropland and more...... extensively managed land. Particularly in regions with high proportions of agricultural land use in Natura2000 sites, habitat protection is closely linked with the intensity of agricultural land use. Thus, it is important to understand dynamics between intensive and extensive land use. Denmark, where Natura......2000 sites comprise approximately 8 percent of the terrestrial area, is the EU member state with the highest proportion of agricultural land use in Natura2000 sites. The Habitat Directive (HD) was implemented in Denmark in 2003. This implied increased focus from authorities on extensification...

  10. Selection of the Mars Science Laboratory landing site

    Science.gov (United States)

    Golombek, M.; Grant, J.; Kipp, D.; Vasavada, A.; Kirk, Randolph L.; Fergason, Robin L.; Bellutta, P.; Calef, F.; Larsen, K.; Katayama, Y.; Huertas, A.; Beyer, R.; Chen, A.; Parker, T.; Pollard, B.; Lee, S.; Hoover, R.; Sladek, H.; Grotzinger, J.; Welch, R.; Dobrea, E. Noe; Michalski, J.; Watkins, M.

    2012-01-01

    The selection of Gale crater as the Mars Science Laboratory landing site took over five years, involved broad participation of the science community via five open workshops, and narrowed an initial >50 sites (25 by 20 km) to four finalists (Eberswalde, Gale, Holden and Mawrth) based on science and safety. Engineering constraints important to the selection included: (1) latitude (±30°) for thermal management of the rover and instruments, (2) elevation (surface that is safe for landing and roving and not dominated by fine-grained dust. Science criteria important for the selection include the ability to assess past habitable environments, which include diversity, context, and biosignature (including organics) preservation. Sites were evaluated in detail using targeted data from instruments on all active orbiters, and especially Mars Reconnaissance Orbiter. All of the final four sites have layered sedimentary rocks with spectral evidence for phyllosilicates that clearly address the science objectives of the mission. Sophisticated entry, descent and landing simulations that include detailed information on all of the engineering constraints indicate all of the final four sites are safe for landing. Evaluation of the traversabilty of the landing sites and target “go to” areas outside of the ellipse using slope and material properties information indicates that all are trafficable and “go to” sites can be accessed within the lifetime of the mission. In the final selection, Gale crater was favored over Eberswalde based on its greater diversity and potential habitability.

  11. A Case Study in the Mars Landing Site Selection for Science Objects

    Directory of Open Access Journals (Sweden)

    Haingja Seo

    2012-12-01

    Full Text Available It is a crucial matter to select a landing site for landers or rovers in planning the Mars exploration. The landing site must have not only a scientific value as a landing site, but also geographical features to lead a safe landing for Mars probes. In this regard, this study analyzed landing site of Mars probes and rovers in previous studies and discussed the adequacy of the landing site to scientific missions. Moreover, this study also examined domestic studies on the Mars. The frameworks of these studies will guide the selection of exploration sites and a landing site when sending Mars probe to the Mars through our own efforts. Additionally, this paper will be used as the preliminary data for selection of exploration site and a landing site.

  12. Ole Rømers mange talenter

    DEFF Research Database (Denmark)

    Pedersen, Kurt Møller

    2005-01-01

    Artiklen giver en oversigt over Ole Rømers videnskabelige liv som astronom, fysiker og matematiker samt hans betydning som kongelig embedsmand.......Artiklen giver en oversigt over Ole Rømers videnskabelige liv som astronom, fysiker og matematiker samt hans betydning som kongelig embedsmand....

  13. Land contamination. Technical guidance on special sites: nuclear sites

    International Nuclear Information System (INIS)

    Hill, M.; Steeds, J.; Slade, N.

    2001-01-01

    Part IIA of the Environmental Protection Act 1990 sets out a regulatory regime for the identification and remediation of land where contamination is causing unacceptable risks to defined receptors. The Environment Agency has a number of regulatory roles under this regime. Where land is designated as a Special Site, as defined in the Contaminated Land (England) Regulations 2000, the Agency will act as the enforcing authority. It is expected that a similar regime will be introduced in Wales during 2001, but the reader should check whether definitions of Special Sites in the Welsh regulations are the same as in the English ones. The Environment Agency's approach to carrying out its regulatory responsibilities is set out in its Part RA Process Documentation,, available on the Agency website (www.environment-agency. gov.uk). This documentation sets out how the Agency intends to carry out its responsibilities under Part IIA of the Environmental Protection Act 1990, which came into force in England on 1 April 2000

  14. Isolation, identification and PCR amplification of merA gene from ...

    African Journals Online (AJOL)

    Mercury resistant Escherichia coli strains have been isolated from different mercury polluted sites of India and their minimum inhibitory concentration (MIC) levels were determined. The zone of inhibition was measured to find the antibiotic sensitivity level. The location of mer operon was determined by transforming the ...

  15. Detection of helicopter landing sites in unprepared terrain

    Science.gov (United States)

    Peinecke, Niklas

    2014-06-01

    The primary usefulness of helicopters shows in missions where regular aircraft cannot be used, especially HEMS (Helicopter Emergency Medical Services). This might be due to requirements for landing in unprepared areas without dedicated runway structures, and an extended exibility to y to more than one previously unprepared target. One example of such missions are search and rescue operations. An important task of such a mission is to locate a proper landing spot near the mission target. Usually, the pilot would have to evaluate possible landing sites by himself, which can be time-intensive, fuel-costly, and generally impossible when operating in degraded visual environments. We present a method for pre-selecting a list of possible landing sites. After specifying the intended size, orientation and geometry of the site, a choice of possibilities is presented to the pilot that can be ordered by means of wind direction, terrain constraints like maximal slope and roughness, and proximity to a mission target. The possible choices are calculated automatically either from a pre-existing terrain data base, or from sensor data collected during earlier missions, e.g., by collecting data with radar or laser sensors. Additional data like water-body maps and topological information can be taken into account to avoid landing in dangerous areas under adverse view conditions. In case of an emergency turnaround the list can be re-ordered to present alternative sites to the pilot. We outline the principle algorithm for selecting possible landing sites, and we present examples of calculated lists.

  16. Runway Arrested Landing Site (RALS)

    Data.gov (United States)

    Federal Laboratory Consortium — The Runway Arrested Landing Site includes an underground complex located on a Mod 2, Mod 3, and Mod 3+ arresting gear and are located under the runway and accurately...

  17. Land-use trends related to Natura2000 sites in Denmark

    DEFF Research Database (Denmark)

    Levin, Gregor; Nainggolan, Doan; Frederiksen, Pia

    2018-01-01

    EU-member states are obliged to designate Natura2000 sites for habitat protection. Natura2000 sites comprise approximately 18 percent of the terrestrial area of the EU. On average, around 22 percent of Natura2000 sites are covered by agricultural land use, such as intensive cropland and more...... and change in area of extensive land use for two periods: From 2000 to 2003, before the implementation of the HD and from 2003 to 2013, after its implementation. In order to control for the influences of biophysical constraints on agricultural intensity, we included information on slopes and peat soil...... extensively managed land. Particularly in regions with high proportions of agricultural land use in Natura2000 sites, habitat protection is closely linked with the intensity of agricultural land use. Thus, it is important to understand dynamics between intensive and extensive land use. Denmark, where Natura...

  18. Molecular interaction study of commercial cyclic peptides and MERS-COV papain-like protease as novel drug candidate for MERS-COV

    Science.gov (United States)

    Nasution, M. A. F.; Azzuhdi, M. G.; Tambunan, U. S. F.

    2017-07-01

    Middle-east respiratory syndrome coronavirus (MERS-CoV) has become the current outbreak, MERS-CoV infection results in illness at the respiratory system, digestive, and even lead to death with an average mortality caused by MERS-CoV infection reaches 50 %. Until now, there is not any effective vaccine or drug to ward off MERS-CoV infection. Papain-like protease (PLpro) is responsible for cleavage of a nonstructural protein that is essential for viral maturation. Inhibition of PLpro with a ligand will block the cleavage process of nonstructural protein, thus reduce the infection of MERS-CoV. Through of bioinformatics study with molecular docking and binding interaction analysis of commercial cyclic peptides, aldosterone secretion inhibiting factor (1-35) (bovine) was obtained as an inhibitor for PLpro. Thus, aldosterone secretion inhibiting factor (1-35) (bovine) has a potential as a novel candidate drug for treating MERS-CoV.

  19. Influence of defects on the effective electrical conductivity of a monolayer produced by random sequential adsorption of linear k-mers onto a square lattice

    Science.gov (United States)

    Tarasevich, Yuri Yu.; Laptev, Valeri V.; Goltseva, Valeria A.; Lebovka, Nikolai I.

    2017-07-01

    The effect of defects on the behaviour of electrical conductivity, σ, in a monolayer produced by the random sequential adsorption of linear k-mers (particles occupying k adjacent sites) onto a square lattice is studied by means of a Monte Carlo simulation. The k-mers are deposited on the substrate until a jamming state is reached. The presence of defects in the lattice (impurities) and of defects in the k-mers with concentrations of dl and dk, respectively, is assumed. The defects in the lattice are distributed randomly before deposition and these lattice sites are forbidden for the deposition of k-mers. The defects of the k-mers are distributed randomly on the deposited k-mers. The sites filled with k-mers have high electrical conductivity, σk, whereas the empty sites, and the sites filled by either types of defect have a low electrical conductivity, σl, i.e., a high-contrast, σk /σl ≫ 1, is assumed. We examined isotropic (both the possible x and y orientations of a particle are equiprobable) and anisotropic (all particles are aligned along one given direction, y) deposition. To calculate the effective electrical conductivity, the monolayer was presented as a random resistor network and the Frank-Lobb algorithm was used. The effects of the concentrations of defects dl and dk on the electrical conductivity for the values of k =2n, where n = 1 , 2 , … , 5, were studied. Increase of both the dl and dk parameters values resulted in decreases in the value of σ and the suppression of percolation. Moreover, for anisotropic deposition the electrical conductivity along the y direction was noticeably larger than in the perpendicular direction, x. Phase diagrams in the (dl ,dk)-plane for different values of k were obtained.

  20. Mars-Moons Exploration, Reconnaissance and Landed Investigation (MERLIN)

    Science.gov (United States)

    Murchie, S. L.; Chabot, N. L.; Buczkowski, D.; Arvidson, R. E.; Castillo, J. C.; Peplowski, P. N.; Ernst, C. M.; Rivkin, A.; Eng, D.; Chmielewski, A. B.; Maki, J.; trebi-Ollenu, A.; Ehlmann, B. L.; Spence, H. E.; Horanyi, M.; Klingelhoefer, G.; Christian, J. A.

    2015-12-01

    The Mars-Moons Exploration, Reconnaissance and Landed Investigation (MERLIN) is a NASA Discovery mission proposal to explore the moons of Mars. Previous Mars-focused spacecraft have raised fundamental questions about Mars' moons: What are their origins and compositions? Why do the moons resemble primitive outer solar system D-type objects? How do geologic processes modify their surfaces? MERLIN answers these questions through a combination of orbital and landed measurements, beginning with reconnaissance of Deimos and investigation of the hypothesized Martian dust belts. Orbital reconnaissance of Phobos occurs, followed by low flyovers to characterize a landing site. MERLIN lands on Phobos, conducting a 90-day investigation. Radiation measurements are acquired throughout all mission phases. Phobos' size and mass provide a low-risk landing environment: controlled descent is so slow that the landing is rehearsed, but gravity is high enough that surface operations do not require anchoring. Existing imaging of Phobos reveals low regional slope regions suitable for landing, and provides knowledge for planning orbital and landed investigations. The payload leverages past NASA investments. Orbital imaging is accomplished by a dual multispectral/high-resolution imager rebuilt from MESSENGER/MDIS. Mars' dust environment is measured by the refurbished engineering model of LADEE/LDEX, and the radiation environment by the flight spare of LRO/CRaTER. The landed workspace is characterized by a color stereo imager updated from MER/HazCam. MERLIN's arm deploys landed instrumentation using proven designs from MER, Phoenix, and MSL. Elemental measurements are acquired by a modified version of Rosetta/APXS, and an uncooled gamma-ray spectrometer. Mineralogical measurements are acquired by a microscopic imaging spectrometer developed under MatISSE. MERLIN delivers seminal science traceable to NASA's Strategic Goals and Objectives, Science Plan, and the Decadal Survey. MERLIN's science

  1. Isolation and Cloning of mercuric reductase gene (merA from mercury-resistant bacteria

    Directory of Open Access Journals (Sweden)

    Parisa Khoshniyat

    2018-03-01

    Full Text Available Introduction: Some of the bacteria having merA gene coding mineral mercury reducing enzyme, has genetic potential of Hg removing via reduction of mineral mercury and transformation of that to gas form and finally bioremediation of polluted area. The aim of this study is the isolation of merA gene from resistance bacteria and cloning of that into suitable expression vector and then the environmental bioremediation by the transformation of bacteria with this vector. Materials and methods: A number of bacteria were collected in contaminated areas with mercury in order to isolate merA genes. Polymerase chain reaction had done on the four bacterial genomes including Klebsiella pneumoniae, Pseudomonas aeruginosa, Serratia marcescens and Escherichia coli using the specific primers in order to detect merA gene. For cloning, the primers containing restriction enzyme sites are used, merA gene was isolated and amplified. The amplified fragments were cloned in the expression vector pET21a+ and via heat shock method were transformed into E. coli TOP10 competent cell. For clustering of genes, Mega software version 4 was used and bioanformatic studies were achieved for predicted enzyme. Results: merA gene with 1686 bp in length was isolated from K pneumoniae and E. coli. Recombinant vectors in transgenic bacteria were confirmed by various methods and finally were confirmed by sequencing. The result of clustering these genes with existence genes in NCBI showed high similarity. Discussion and conclusion: The existence of merA gene in bacteria that adapted to Hg pollution area is because of resistance, so with cloning this gene into suitable expression vector and transformation of susceptible bacteria with this vector ability of resistance to Hg in bacteria for bioremediation could be given.

  2. MERS-coronavirus: From discovery to intervention

    NARCIS (Netherlands)

    W. Widagdo; N.M.A. Okba (Nisreen); V. Stalin Raj; B.L. Haagmans (Bart)

    2017-01-01

    textabstractMiddle East respiratory syndrome coronavirus (MERS-CoV) still causes outbreaks despite public awareness and implementation of health care measures, such as rapid viral diagnosis and patient quarantine. Here we describe the current epidemiological picture of MERS-CoV, focusing on humans

  3. MERS transmission and risk factors: a systematic review.

    Science.gov (United States)

    Park, Ji-Eun; Jung, Soyoung; Kim, Aeran; Park, Ji-Eun

    2018-05-02

    Since Middle East respiratory syndrome (MERS) infection was first reported in 2012, many studies have analysed its transmissibility and severity. However, the methodology and results of these studies have varied, and there has been no systematic review of MERS. This study reviews the characteristics and associated risk factors of MERS. We searched international (PubMed, ScienceDirect, Cochrane) and Korean databases (DBpia, KISS) for English- or Korean-language articles using the terms "MERS" and "Middle East respiratory syndrome". Only human studies with > 20 participants were analysed to exclude studies with low representation. Epidemiologic studies with information on transmissibility and severity of MERS as well as studies containing MERS risk factors were included. A total of 59 studies were included. Most studies from Saudi Arabia reported higher mortality (22-69.2%) than those from South Korea (20.4%). While the R 0 value in Saudi Arabia was < 1 in all but one study, in South Korea, the R 0 value was 2.5-8.09 in the early stage and decreased to < 1 in the later stage. The incubation period was 4.5-5.2 days in Saudi Arabia and 6-7.8 days in South Korea. Duration from onset was 4-10 days to confirmation, 2.9-5.3 days to hospitalization, 11-17 days to death, and 14-20 days to discharge. Older age and concomitant disease were the most common factors related to MERS infection, severity, and mortality. The transmissibility and severity of MERS differed by outbreak region and patient characteristics. Further studies assessing the risk of MERS should consider these factors.

  4. Site Study Plan for land use, Deaf Smith County site, Texas: Environmental Field Program: Preliminary draft

    International Nuclear Information System (INIS)

    1987-06-01

    The Land Use Site Study Plan describes a field program consisting of characterization of the site; seismic survey rights-of-way and transportation and utility corridors, the vicinity, the region, future land use, and monitoring land-use change. Aerial photography will be used to characterize the site, seismic rows and transportation and utility corridors, and the vicinity. The resulting land-use maps and overlays will then be verified in the field. Interviews with farm managers and local experts will provide additional information. A Geographic Information System (GIS) and satellite imagery will be used to characterize the region, monitor land-use change, and provide information to assist with the future land use study. The site study plan describes the study design and rationale, the filed data collection procedures and equipment, the data analysis methods and application of results, the data management strategy, the schedule of field activities, the personnel requirements and management of the study, and the study's quality assurance program. The directives and requirements that drive these studies are derived from the Salt Repository Project Requirements Document. 51 refs; 6 figs; 3 tabs

  5. Enhanced regulatory sequence prediction using gapped k-mer features.

    Science.gov (United States)

    Ghandi, Mahmoud; Lee, Dongwon; Mohammad-Noori, Morteza; Beer, Michael A

    2014-07-01

    Oligomers of length k, or k-mers, are convenient and widely used features for modeling the properties and functions of DNA and protein sequences. However, k-mers suffer from the inherent limitation that if the parameter k is increased to resolve longer features, the probability of observing any specific k-mer becomes very small, and k-mer counts approach a binary variable, with most k-mers absent and a few present once. Thus, any statistical learning approach using k-mers as features becomes susceptible to noisy training set k-mer frequencies once k becomes large. To address this problem, we introduce alternative feature sets using gapped k-mers, a new classifier, gkm-SVM, and a general method for robust estimation of k-mer frequencies. To make the method applicable to large-scale genome wide applications, we develop an efficient tree data structure for computing the kernel matrix. We show that compared to our original kmer-SVM and alternative approaches, our gkm-SVM predicts functional genomic regulatory elements and tissue specific enhancers with significantly improved accuracy, increasing the precision by up to a factor of two. We then show that gkm-SVM consistently outperforms kmer-SVM on human ENCODE ChIP-seq datasets, and further demonstrate the general utility of our method using a Naïve-Bayes classifier. Although developed for regulatory sequence analysis, these methods can be applied to any sequence classification problem.

  6. Enhanced regulatory sequence prediction using gapped k-mer features.

    Directory of Open Access Journals (Sweden)

    Mahmoud Ghandi

    2014-07-01

    Full Text Available Oligomers of length k, or k-mers, are convenient and widely used features for modeling the properties and functions of DNA and protein sequences. However, k-mers suffer from the inherent limitation that if the parameter k is increased to resolve longer features, the probability of observing any specific k-mer becomes very small, and k-mer counts approach a binary variable, with most k-mers absent and a few present once. Thus, any statistical learning approach using k-mers as features becomes susceptible to noisy training set k-mer frequencies once k becomes large. To address this problem, we introduce alternative feature sets using gapped k-mers, a new classifier, gkm-SVM, and a general method for robust estimation of k-mer frequencies. To make the method applicable to large-scale genome wide applications, we develop an efficient tree data structure for computing the kernel matrix. We show that compared to our original kmer-SVM and alternative approaches, our gkm-SVM predicts functional genomic regulatory elements and tissue specific enhancers with significantly improved accuracy, increasing the precision by up to a factor of two. We then show that gkm-SVM consistently outperforms kmer-SVM on human ENCODE ChIP-seq datasets, and further demonstrate the general utility of our method using a Naïve-Bayes classifier. Although developed for regulatory sequence analysis, these methods can be applied to any sequence classification problem.

  7. Structural and Biochemical Characterization of Organotin and Organolead Compounds Binding to the Organomercurial Lyase MerB Provide New Insights into Its Mechanism of Carbon–Metal Bond Cleavage

    Energy Technology Data Exchange (ETDEWEB)

    Wahba, Haytham M. [Département; Faculty; Stevenson, Michael J. [Department; Mansour, Ahmed [Département; Sygusch, Jurgen [Département; Wilcox, Dean E. [Department; Omichinski, James G. [Département

    2017-01-03

    The organomercurial lyase MerB has the unique ability to cleave carbon–Hg bonds, and structural studies indicate that three residues in the active site (C96, D99, and C159 in E. coli MerB) play important roles in the carbon–Hg bond cleavage. However, the role of each residue in carbon–metal bond cleavage has not been well-defined. To do so, we have structurally and biophysically characterized the interaction of MerB with a series of organotin and organolead compounds. Studies with two known inhibitors of MerB, dimethyltin (DMT) and triethyltin (TET), reveal that they inhibit by different mechanisms. In both cases the initial binding is to D99, but DMT subsequently binds to C96, which induces a conformation change in the active site. In contrast, diethyltin (DET) is a substrate for MerB and the SnIV product remains bound in the active site in a coordination similar to that of HgII following cleavage of organomercurial compounds. The results with analogous organolead compounds are similar in that trimethyllead (TML) is not cleaved and binds only to D99, whereas diethyllead (DEL) is a substrate and the PbIV product remains bound in the active site. Binding and cleavage is an exothermic reaction, while binding to D99 has negligible net heat flow. These results show that initial binding of organometallic compounds to MerB occurs at D99 followed, in some cases, by cleavage and loss of the organic moieties and binding of the metal ion product to C96, D99, and C159. The N-terminus of MerA is able to extract the bound PbVI but not the bound SnIV. These results suggest that MerB could be utilized for bioremediation applications, but certain organolead and organotin compounds may present an obstacle by inhibiting the enzyme.

  8. Perceptions of on-site hunters: Environmental concerns, future land use, and cleanup options at the Savannah River Site

    International Nuclear Information System (INIS)

    Burger, J.; Sanchez, J.

    1999-01-01

    The Department of Energy owns land in 34 states, and most of these lands have been off limits to the public for over 50 years. Although some parts of each site are contaminated, most of many sites are not. With the ending of the Cold War, the department is considering alternative land uses. In this article, the perceptions of hunters and fishermen allowed on site for a limited time were examined, about environmental concerns, future land use, and cleanup options. Although loss of jobs was the foremost concern, preserving parts of the site had more support as a future land use than continuing the nuclear mission, and nearly three-quarters of the sample supported cleanup, regardless of cost. On-site employment was a significant indicator of lower concern about safety and environmental issues, less support for designating the site for research, and more concern for maintaining jobs

  9. Human Centered Design and Development for NASA's MerBoard

    Science.gov (United States)

    Trimble, Jay

    2003-01-01

    This viewgraph presentation provides an overview of the design and development process for NASA's MerBoard. These devices are large interactive display screens which can be shown on the user's computer, which will allow scientists in many locations to interpret and evaluate mission data in real-time. These tools are scheduled to be used during the 2003 Mars Exploration Rover (MER) expeditions. Topics covered include: mission overview, Mer Human Centered Computers, FIDO 2001 observations and MerBoard prototypes.

  10. MERS and SARS

    Science.gov (United States)

    ... primary antibody and Goat anti-Rabbit 10 nm gold particles. Middle East Respiratory Syndrome (MERS-CoV) is ... standard mice or hamsters, scientists at NIAID Rocky Mountain Laboratories (RML) took the unusual step of moving ...

  11. Pairing FLUXNET sites to validate model representations of land-use/land-cover change

    Science.gov (United States)

    Chen, Liang; Dirmeyer, Paul A.; Guo, Zhichang; Schultz, Natalie M.

    2018-01-01

    Land surface energy and water fluxes play an important role in land-atmosphere interactions, especially for the climatic feedback effects driven by land-use/land-cover change (LULCC). These have long been documented in model-based studies, but the performance of land surface models in representing LULCC-induced responses has not been investigated well. In this study, measurements from proximate paired (open versus forest) flux tower sites are used to represent observed deforestation-induced changes in surface fluxes, which are compared with simulations from the Community Land Model (CLM) and the Noah Multi-Parameterization (Noah-MP) land model. Point-scale simulations suggest the CLM can represent the observed diurnal and seasonal changes in net radiation (Rnet) and ground heat flux (G), but difficulties remain in the energy partitioning between latent (LE) and sensible (H) heat flux. The CLM does not capture the observed decreased daytime LE, and overestimates the increased H during summer. These deficiencies are mainly associated with models' greater biases over forest land-cover types and the parameterization of soil evaporation. Global gridded simulations with the CLM show uncertainties in the estimation of LE and H at the grid level for regional and global simulations. Noah-MP exhibits a similar ability to simulate the surface flux changes, but with larger biases in H, G, and Rnet change during late winter and early spring, which are related to a deficiency in estimating albedo. Differences in meteorological conditions between paired sites is not a factor in these results. Attention needs to be devoted to improving the representation of surface heat flux processes in land models to increase confidence in LULCC simulations.

  12. Statistically Consistent k-mer Methods for Phylogenetic Tree Reconstruction.

    Science.gov (United States)

    Allman, Elizabeth S; Rhodes, John A; Sullivant, Seth

    2017-02-01

    Frequencies of k-mers in sequences are sometimes used as a basis for inferring phylogenetic trees without first obtaining a multiple sequence alignment. We show that a standard approach of using the squared Euclidean distance between k-mer vectors to approximate a tree metric can be statistically inconsistent. To remedy this, we derive model-based distance corrections for orthologous sequences without gaps, which lead to consistent tree inference. The identifiability of model parameters from k-mer frequencies is also studied. Finally, we report simulations showing that the corrected distance outperforms many other k-mer methods, even when sequences are generated with an insertion and deletion process. These results have implications for multiple sequence alignment as well since k-mer methods are usually the first step in constructing a guide tree for such algorithms.

  13. Land Use Baseline Report Savannah River Site

    International Nuclear Information System (INIS)

    Noah, J.C.

    1995-01-01

    This document is to serve as a resource for Savannah River Site managers, planners, and SRS stakeholders by providing a general description of the site and land-use factors important to future use decisions and plans. The intent of this document is to be comprehensive in its review of SRS and the surrounding area

  14. Land Use Baseline Report Savannah River Site

    Energy Technology Data Exchange (ETDEWEB)

    Noah, J.C.

    1995-06-29

    This document is to serve as a resource for Savannah River Site managers, planners, and SRS stakeholders by providing a general description of the site and land-use factors important to future use decisions and plans. The intent of this document is to be comprehensive in its review of SRS and the surrounding area.

  15. Visualisation of very high resolution Martian topographic data and its application on landing site selection and rover route navigation

    Science.gov (United States)

    Kim, J.; Lin, S.; Hong, J.; Park, D.; Yoon, S.; Kim, Y.

    2010-12-01

    High resolution satellite imagery acquired from orbiters are able to provide detailed topographic information and therefore are recognised as an important tool for investigating planetary and terrestrial topography. The heritage of in-orbit high resolution imaging technology is now implemented in a series of Martian Missions, such as HiRISE (High Resolution Imaging Science Experiment) and CTX (Context Camera) onboard the MRO (Mars Reconnaissance Orbiter). In order to fully utilise the data derived from image systems carried on various Mars orbiters, the generalised algorithms of image processing and photogrammetric Mars DTM extraction have been developed and implemented by Kim and Muller (2009), in which non-rigorous sensor model and hierarchical geomatics control were employed. Due to the successful “from medium to high” control strategy performed during processing, stable horizontal and vertical photogrammetric accuracy of resultant Mars DTM was achievable when compared with MOLA (Mars Obiter Laser Altimeter) DTM. Recently, the algorithms developed in Kim and Muller (2009) were further updated by employing advanced image matcher and improved sensor model. As the photogrammetric qualities of the updated topographic products are verified and the spatial solution can be up to sub-meter scale, they are of great value to be exploited for Martian rover landing site selection and rover route navigation. To this purpose, the DTMs and ortho-rectified imagery obtained from CTX and HiRISE covering potential future rovers and existing MER (Mars Exploration Rover) landing sites were firstly processed. For landing site selection, the engineering constraints such as slope and surface roughness were computed from DTMs. In addition, the combination of virtual topography and the estimated rover location was able to produce a sophisticated environment simulation of rover’s landing site. Regarding the rover navigation, the orbital DTMs and the images taken from cameras

  16. Transcriptional switching by the MerR protein: Activation and repression mutants implicate distinct DNA and mercury(II) binding domains

    International Nuclear Information System (INIS)

    Shewchuk, L.M.; Helmann, J.D.; Ross, W.; Park, S.J.; Summers, A.O.; Walsh, C.T.

    1989-01-01

    Bacterial resistance to mercuric compounds is controlled by the MerR metalloregulatory protein. The MerR protein functions as both a transcriptional repressor and a mercuric ion dependent transcriptional activator. Chemical mutagenesis of the cloned merR structural gene has led to the identification of mutant proteins that are specifically deficient in transcriptional repression, activation, or both. Five mutant proteins have been overproduced, purified to homogeneity, and assayed for ability to dimerize, bind mer operator DNA, and bind mercuric ion. A mutation in the recognition helix of a proposed helix-turn-helix DNA binding motif (E22K) yields protein deficient in both activation and repression in vivo (a - r - ) and deficient in operator binding in vitro. In contrast, mutations in three of the four MerR cysteine residues are repression competent but activation deficient (a - r + ) in vivo. In vitro, the purified cysteine mutant proteins bind to the mer operator site with near wild-type affinity but are variable deficient in binding the in vivo inducer mercury(II) ion. A subset of the isolated proteins also appears compromised in their ability to form dimers at low protein concentrations. These data support a model in which DNA-bound MerR dimer binds one mercuric ion and transmits this occupancy information to a protein region involved in transcriptional activation

  17. Cross-site comparison of land-use decision-making and its consequences across land systems with a generalized agent-based model.

    Science.gov (United States)

    Magliocca, Nicholas R; Brown, Daniel G; Ellis, Erle C

    2014-01-01

    Local changes in land use result from the decisions and actions of land-users within land systems, which are structured by local and global environmental, economic, political, and cultural contexts. Such cross-scale causation presents a major challenge for developing a general understanding of how local decision-making shapes land-use changes at the global scale. This paper implements a generalized agent-based model (ABM) as a virtual laboratory to explore how global and local processes influence the land-use and livelihood decisions of local land-users, operationalized as settlement-level agents, across the landscapes of six real-world test sites. Test sites were chosen in USA, Laos, and China to capture globally-significant variation in population density, market influence, and environmental conditions, with land systems ranging from swidden to commercial agriculture. Publicly available global data were integrated into the ABM to model cross-scale effects of economic globalization on local land-use decisions. A suite of statistics was developed to assess the accuracy of model-predicted land-use outcomes relative to observed and random (i.e. null model) landscapes. At four of six sites, where environmental and demographic forces were important constraints on land-use choices, modeled land-use outcomes were more similar to those observed across sites than the null model. At the two sites in which market forces significantly influenced land-use and livelihood decisions, the model was a poorer predictor of land-use outcomes than the null model. Model successes and failures in simulating real-world land-use patterns enabled the testing of hypotheses on land-use decision-making and yielded insights on the importance of missing mechanisms. The virtual laboratory approach provides a practical framework for systematic improvement of both theory and predictive skill in land change science based on a continual process of experimentation and model enhancement.

  18. Cross-site comparison of land-use decision-making and its consequences across land systems with a generalized agent-based model.

    Directory of Open Access Journals (Sweden)

    Nicholas R Magliocca

    Full Text Available Local changes in land use result from the decisions and actions of land-users within land systems, which are structured by local and global environmental, economic, political, and cultural contexts. Such cross-scale causation presents a major challenge for developing a general understanding of how local decision-making shapes land-use changes at the global scale. This paper implements a generalized agent-based model (ABM as a virtual laboratory to explore how global and local processes influence the land-use and livelihood decisions of local land-users, operationalized as settlement-level agents, across the landscapes of six real-world test sites. Test sites were chosen in USA, Laos, and China to capture globally-significant variation in population density, market influence, and environmental conditions, with land systems ranging from swidden to commercial agriculture. Publicly available global data were integrated into the ABM to model cross-scale effects of economic globalization on local land-use decisions. A suite of statistics was developed to assess the accuracy of model-predicted land-use outcomes relative to observed and random (i.e. null model landscapes. At four of six sites, where environmental and demographic forces were important constraints on land-use choices, modeled land-use outcomes were more similar to those observed across sites than the null model. At the two sites in which market forces significantly influenced land-use and livelihood decisions, the model was a poorer predictor of land-use outcomes than the null model. Model successes and failures in simulating real-world land-use patterns enabled the testing of hypotheses on land-use decision-making and yielded insights on the importance of missing mechanisms. The virtual laboratory approach provides a practical framework for systematic improvement of both theory and predictive skill in land change science based on a continual process of experimentation and model

  19. The prevalence of Middle East respiratory Syndrome coronavirus (MERS-CoV) infection in livestock and temporal relation to locations and seasons.

    Science.gov (United States)

    Kasem, Samy; Qasim, Ibrahim; Al-Doweriej, Ali; Hashim, Osman; Alkarar, Ali; Abu-Obeida, Ali; Saleh, Mohamed; Al-Hofufi, Ali; Al-Ghadier, Hussein; Hussien, Raed; Al-Sahaf, Ali; Bayoumi, Faisal; Magouz, Asmaa

    2018-01-29

    The Middle East respiratory syndrome (MERS) has been reported for the first time infecting a human being since 2012. The WHO was notified of 27 countries have reported cases of MERS, the majority of these cases occur in the Arabian Peninsula, particularly in Saudi Arabia. Dromedary camels are likely to be the main source of Middle East respiratory syndrome virus (MERS-CoV) infection in humans. MERS-CoV infection rates among camels in livestock markets and slaughterhouses were investigated in Saudi Arabia. A total of 698 nasal swabs were collected and examined with Rapid assay and rtRT-PCR. Ten MERS-CoV positive samples were subjected to full genomic sequencing. In addition, the sensitivity and specificity of the Rapid immunochromatographic assay (BioNote, South Korea) was evaluated as a diagnostic tool for MERS-CoV compared to rtRT-PCR. The results showed a high percentage of dromedaries (56.4%) had evidence for nasal MERS-CoV infection. Phylogenetic analysis of the ten MERS-CoV isolates showed that the sequences were closely related to the other MERS-CoV strains recovered from camels and human cases. Moreover, the results showed that 195 samples were positive for MERS-CoV by rapid assay compared to 394 positive samples of rtRT-PCR, which showed low rapid assay sensitivity (49.49%) while, the specificity were found to be 100%. These findings indicate that these sites are a highly-hazardous to zoonotic diseases. Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.

  20. Complete Genome Sequence of Middle East Respiratory Syndrome Coronavirus (MERS-CoV) from the First Imported MERS-CoV Case in China.

    Science.gov (United States)

    Lu, Roujian; Wang, Yanqun; Wang, Wenling; Nie, Kai; Zhao, Yanjie; Su, Juan; Deng, Yao; Zhou, Weimin; Li, Yang; Wang, Huijuan; Wang, Wen; Ke, Changwen; Ma, Xuejun; Wu, Guizhen; Tan, Wenjie

    2015-08-13

    On 26 May 2015, an imported Middle East respiratory syndrome coronavirus (MERS-CoV) was identified in Guangdong Province, China, and found to be closely related to the MERS-CoV strain prevalent in South Korea. The full genome of the ChinaGD01 strain was sequenced and analyzed to investigate the epidemiology and evolution of MERS-CoV circulating in South Korea and China. Copyright © 2015 Lu et al.

  1. Deterministic and stochastic models for middle east respiratory syndrome (MERS)

    Science.gov (United States)

    Suryani, Dessy Rizki; Zevika, Mona; Nuraini, Nuning

    2018-03-01

    World Health Organization (WHO) data stated that since September 2012, there were 1,733 cases of Middle East Respiratory Syndrome (MERS) with 628 death cases that occurred in 27 countries. MERS was first identified in Saudi Arabia in 2012 and the largest cases of MERS outside Saudi Arabia occurred in South Korea in 2015. MERS is a disease that attacks the respiratory system caused by infection of MERS-CoV. MERS-CoV transmission occurs directly through direct contact between infected individual with non-infected individual or indirectly through contaminated object by the free virus. Suspected, MERS can spread quickly because of the free virus in environment. Mathematical modeling is used to illustrate the transmission of MERS disease using deterministic model and stochastic model. Deterministic model is used to investigate the temporal dynamic from the system to analyze the steady state condition. Stochastic model approach using Continuous Time Markov Chain (CTMC) is used to predict the future states by using random variables. From the models that were built, the threshold value for deterministic models and stochastic models obtained in the same form and the probability of disease extinction can be computed by stochastic model. Simulations for both models using several of different parameters are shown, and the probability of disease extinction will be compared with several initial conditions.

  2. Renewed mer model of integral management

    Directory of Open Access Journals (Sweden)

    Janko Belak

    2015-12-01

    Full Text Available Background: The research work on entrepreneurship, enterprise's policy and management, which started in 1992, successfully continued in the following years. Between 1992 and 2011, more than 400 academics and other researchers have participated in research work (MER research program whose main orientation has been the creation of their own model of integral management. Results: In past years, academics (researchers and authors of published papers from Austria, Belgium, Bosnia and Herzegovina, Bulgaria, Byelorussia, Canada, the Czech Republic, Croatia, Estonia, France, Germany, Hungary, Italy, Poland, Romania, Russia, the Slovak Republic, Slovenia, Switzerland, Ukraine, and the US have cooperated in MER programs, coming from more than fifty institutions. Thus, scientific doctrines of different universities influenced the development of the MER model which is based on both horizontal and vertical integration of the enterprises' governance and management processes, instruments and institutions into a consistently operating unit. Conclusions: The presented MER model is based on the multi-layer integration of governance and management with an enterprise and its environment, considering the fundamental desires for the enterprises' existence and, thus, their quantitative as well as qualitative changes. The process, instrumental, and institutional integrity of the governance and management is also the initial condition for the implementation of all other integration factors.

  3. Intratracheal exposure of common marmosets to MERS-CoV Jordan-n3/2012 or MERS-CoV EMC/2012 isolates does not result in lethal disease

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, Reed F., E-mail: johnsonreed@mail.nih.gov [Emerging Viral Pathogens Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD (United States); Via, Laura E. [Tuberculosis Research Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD (United States); Kumar, Mia R.; Cornish, Joseph P. [Emerging Viral Pathogens Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD (United States); Yellayi, Srikanth; Huzella, Louis; Postnikova, Elena; Oberlander, Nicholas; Bartos, Christopher; Ork, Britini L.; Mazur, Steven; Allan, Cindy; Holbrook, Michael R. [Integrated Research Facility, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD (United States); Solomon, Jeffrey [Center for Infectious Disease Imaging, Radiology and Imaging Sciences, Clinical Center, National Institutes of Health, Bethesda, MD (United States); Johnson, Joshua C. [Integrated Research Facility, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD (United States); Pickel, James [Transgenic Core Facility, National Institute of Mental Health, National Institutes of Health, Bethesda, MD (United States); Hensley, Lisa E. [Integrated Research Facility, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD (United States); Jahrling, Peter B. [Emerging Viral Pathogens Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD (United States); Integrated Research Facility, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD (United States)

    2015-11-15

    Middle East Respiratory Syndrome Coronavirus (MERS-CoV) continues to be a threat to human health in the Middle East. Development of countermeasures is ongoing; however, an animal model that faithfully recapitulates human disease has yet to be defined. A recent study indicated that inoculation of common marmosets resulted in inconsistent lethality. Based on these data we sought to compare two isolates of MERS-CoV. We followed disease progression in common marmosets after intratracheal exposure with: MERS-CoV-EMC/2012, MERS-CoV-Jordan-n3/2012, media, or inactivated virus. Our data suggest that common marmosets developed a mild to moderate non-lethal respiratory disease, which was quantifiable by computed tomography (CT), with limited other clinical signs. Based on CT data, clinical data, and virological data, MERS-CoV inoculation of common marmosets results in mild to moderate clinical signs of disease that are likely due to manipulations of the marmoset rather than as a result of robust viral replication. - Highlights: • Common marmosets infected with MERS-EMC and MERS-JOR did not develop lethal disease. • Infected subjects developed transient signs of clinical disease. • CT indicated few differences between the infected and control groups. • Marmosets do not faithfully replicate human MERS pathogenesis.

  4. Intratracheal exposure of common marmosets to MERS-CoV Jordan-n3/2012 or MERS-CoV EMC/2012 isolates does not result in lethal disease

    International Nuclear Information System (INIS)

    Johnson, Reed F.; Via, Laura E.; Kumar, Mia R.; Cornish, Joseph P.; Yellayi, Srikanth; Huzella, Louis; Postnikova, Elena; Oberlander, Nicholas; Bartos, Christopher; Ork, Britini L.; Mazur, Steven; Allan, Cindy; Holbrook, Michael R.; Solomon, Jeffrey; Johnson, Joshua C.; Pickel, James; Hensley, Lisa E.; Jahrling, Peter B.

    2015-01-01

    Middle East Respiratory Syndrome Coronavirus (MERS-CoV) continues to be a threat to human health in the Middle East. Development of countermeasures is ongoing; however, an animal model that faithfully recapitulates human disease has yet to be defined. A recent study indicated that inoculation of common marmosets resulted in inconsistent lethality. Based on these data we sought to compare two isolates of MERS-CoV. We followed disease progression in common marmosets after intratracheal exposure with: MERS-CoV-EMC/2012, MERS-CoV-Jordan-n3/2012, media, or inactivated virus. Our data suggest that common marmosets developed a mild to moderate non-lethal respiratory disease, which was quantifiable by computed tomography (CT), with limited other clinical signs. Based on CT data, clinical data, and virological data, MERS-CoV inoculation of common marmosets results in mild to moderate clinical signs of disease that are likely due to manipulations of the marmoset rather than as a result of robust viral replication. - Highlights: • Common marmosets infected with MERS-EMC and MERS-JOR did not develop lethal disease. • Infected subjects developed transient signs of clinical disease. • CT indicated few differences between the infected and control groups. • Marmosets do not faithfully replicate human MERS pathogenesis.

  5. Analysis of the geomorphology surrounding the Chang'e-3 landing site

    Science.gov (United States)

    Li, Chun-Lai; Mu, Ling-Li; Zou, Xiao-Duan; Liu, Jian-Jun; Ren, Xin; Zeng, Xing-Guo; Yang, Yi-Man; Zhang, Zhou-Bin; Liu, Yu-Xuan; Zuo, Wei; Li, Han

    2014-12-01

    Chang'e-3 (CE-3) landed on the Mare Imbrium basin in the east part of Sinus Iridum (19.51°W, 44.12°N), which was China's first soft landing on the Moon and it started collecting data on the lunar surface environment. To better understand the environment of this region, this paper utilizes the available high-resolution topography data, image data and geological data to carry out a detailed analysis and research on the area surrounding the landing site (Sinus Iridum and 45 km×70 km of the landing area) as well as on the topography, landform, geology and lunar dust of the area surrounding the landing site. A general topographic analysis of the surrounding area is based on a digital elevation model and digital elevation model data acquired by Chang'e-2 that have high resolution; the geology analysis is based on lunar geological data published by USGS; the study on topographic factors and distribution of craters and rocks in the surrounding area covering 4 km×4 km or even smaller is based on images from the CE-3 landing camera and images from the topographic camera; an analysis is done of the effect of the CE-3 engine plume on the lunar surface by comparing images before and after the landing using data from the landing camera. A comprehensive analysis of the results shows that the landing site and its surrounding area are identified as typical lunar mare with flat topography. They are suitable for maneuvers by the rover, and are rich in geological phenomena and scientific targets, making it an ideal site for exploration.

  6. Multi-Modal Active Perception for Autonomously Selecting Landing Sites on Icy Moons

    Science.gov (United States)

    Arora, A.; Furlong, P. M.; Wong, U.; Fong, T.; Sukkarieh, S.

    2017-01-01

    Selecting suitable landing sites is fundamental to achieving many mission objectives in planetary robotic lander missions. However, due to sensing limitations, landing sites which are both safe and scientifically valuable often cannot be determined reliably from orbit, particularly, in icy moon missions where orbital sensing data is noisy and incomplete. This paper presents an active perception approach to Entry Descent and Landing (EDL) which enables the lander to autonomously plan informative descent trajectories, acquire high quality sensing data during descent and exploit this additional information to select higher utility landing sites. Our approach consists of two components: probabilistic modeling of landing site features and approximate trajectory planning using a sampling based planner. The proposed framework allows the lander to plan long horizons paths and remain robust to noisy data. Results in simulated environments show large performance improvements over alternative approaches and show promise that our approach has strong potential to improve science return of not only icy moon missions but EDL systems in general.

  7. A mouse model for MERS coronavirus-induced acute respiratory distress syndrome.

    Science.gov (United States)

    Cockrell, Adam S; Yount, Boyd L; Scobey, Trevor; Jensen, Kara; Douglas, Madeline; Beall, Anne; Tang, Xian-Chun; Marasco, Wayne A; Heise, Mark T; Baric, Ralph S

    2016-11-28

    Middle East respiratory syndrome coronavirus (MERS-CoV) is a novel virus that emerged in 2012, causing acute respiratory distress syndrome (ARDS), severe pneumonia-like symptoms and multi-organ failure, with a case fatality rate of ∼36%. Limited clinical studies indicate that humans infected with MERS-CoV exhibit pathology consistent with the late stages of ARDS, which is reminiscent of the disease observed in patients infected with severe acute respiratory syndrome coronavirus. Models of MERS-CoV-induced severe respiratory disease have been difficult to achieve, and small-animal models traditionally used to investigate viral pathogenesis (mouse, hamster, guinea-pig and ferret) are naturally resistant to MERS-CoV. Therefore, we used CRISPR-Cas9 gene editing to modify the mouse genome to encode two amino acids (positions 288 and 330) that match the human sequence in the dipeptidyl peptidase 4 receptor, making mice susceptible to MERS-CoV infection and replication. Serial MERS-CoV passage in these engineered mice was then used to generate a mouse-adapted virus that replicated efficiently within the lungs and evoked symptoms indicative of severe ARDS, including decreased survival, extreme weight loss, decreased pulmonary function, pulmonary haemorrhage and pathological signs indicative of end-stage lung disease. Importantly, therapeutic countermeasures comprising MERS-CoV neutralizing antibody treatment or a MERS-CoV spike protein vaccine protected the engineered mice against MERS-CoV-induced ARDS.

  8. A truncated receptor-binding domain of MERS-CoV spike protein potently inhibits MERS-CoV infection and induces strong neutralizing antibody responses: implication for developing therapeutics and vaccines.

    Directory of Open Access Journals (Sweden)

    Lanying Du

    Full Text Available An emerging respiratory infectious disease with high mortality, Middle East respiratory syndrome (MERS, is caused by a novel coronavirus (MERS-CoV. It was first reported in 2012 in Saudi Arabia and has now spread to eight countries. Development of effective therapeutics and vaccines is crucial to save lives and halt the spread of MERS-CoV. Here, we show that a recombinant protein containing a 212-amino acid fragment (residues 377-588 in the truncated receptor-binding domain (RBD: residues 367-606 of MERS-CoV spike (S protein fused with human IgG Fc fragment (S377-588-Fc is highly expressed in the culture supernatant of transfected 293T cells. The purified S377-588-Fc protein efficiently binds to dipeptidyl peptidase 4 (DPP4, the receptor of MERS-CoV, and potently inhibited MERS-CoV infection, suggesting its potential to be further developed as a therapeutic modality for treating MERS-CoV infection and saving the patients' lives. The recombinant S377-588-Fc is able to induce in the vaccinated mice strong MERS-CoV S-specific antibodies, which blocks the binding of RBD to DPP4 receptor and effectively neutralizes MERS-CoV infection. These findings indicate that this truncated RBD protein shows promise for further development as an effective and safe vaccine for the prevention of MERS-CoV infection.

  9. MerCat: a versatile k-mer counter and diversity estimator for database-independent property analysis obtained from metagenomic and/or metatranscriptomic sequencing data

    Energy Technology Data Exchange (ETDEWEB)

    White, Richard A.; Panyala, Ajay R.; Glass, Kevin A.; Colby, Sean M.; Glaesemann, Kurt R.; Jansson, Georg C.; Jansson, Janet K.

    2017-02-21

    MerCat is a parallel, highly scalable and modular property software package for robust analysis of features in next-generation sequencing data. MerCat inputs include assembled contigs and raw sequence reads from any platform resulting in feature abundance counts tables. MerCat allows for direct analysis of data properties without reference sequence database dependency commonly used by search tools such as BLAST and/or DIAMOND for compositional analysis of whole community shotgun sequencing (e.g. metagenomes and metatranscriptomes).

  10. Push-pull effect on the geometrical, optical and charge transfer properties of disubstituted derivatives of mer-tris(4-hydroxy-1,5-naphthyridinato aluminum (mer-AlND3

    Directory of Open Access Journals (Sweden)

    Rao Joshi Laxmikanth

    2016-01-01

    Full Text Available To design innovative and novel optical materials with high mobility, two kinds of disubstituted derivatives for mer-tris(4-hydroxy-1,5-naphthyridinato aluminum (mer-AlND3 with push (EDG–pull (EWG substituents have been designed. The structures of mer-tris(8-EDG-2-EWG-4-hydroxy-1,5-naphthyridinato aluminum (type I and mer-tris(8-EWG-2-EDG-4-hydroxy-1,5-naphthyridinato aluminum (type II in the ground and first excited states have been optimized at the B3LYP/6-31G(D and CIS/6-31G(D level of theory, respectively. It can be seen from frontier molecular orbitals analysis, in all these complexes, the highest occupied molecular orbital (HOMO is localized on the pyridine-4-ol ring of A-ligand while lowest unoccupied molecular orbital (LUMO is on the pyridyl ring of B-ligand in ground state irrespective of electron donor/acceptor substitution present on the ligands similar to that of mer-tris(8-hydroxyquinoline aluminum (mer-Alq3 and parent mer-AlND3.The absorption and emission wavelengths have been evaluated at the TD-PBE0/6-31G(D level and it can be see that all the type I derivatives show blue shift while most of the type II derivatives show red shift compared to mer-AlND3. All the disubstituted complexes have showed hypsochromic shifts in both the absorption and emission spectra when compared with the calculated absorption and emission spectra respectively of mer-Alq3. It can be seen that the reorganization energies of some of the disubstituted derivatives are comparable with mer-Alq3 and these derivatives might be good candidates for emitting materials in OLED.

  11. Analyzing MER Uplink Reports

    Science.gov (United States)

    Savin, Stephen C.

    2005-01-01

    The MER project includes two rovers working simultaneously on opposite sides of Mars each receiving commands only once a day. Creating this uplink is critical, since a failed uplink means a lost day and a waste of money. Examining the process of creating this uplink, I tracked the use of the system developed for requesting observations as well as the development, from stage to stage, in forming an activity plan. I found the system for requesting observations was commonly misused, if used at all. There are half a dozen reports to document the creation of the uplink plan and often there are discrepancies among them. Despite this, the uplink process worked very well and MER has been one of the most successful missions for NASA in recent memory. Still it is clear there is room for improvement.

  12. Competing land use in the reserve site selection problem

    NARCIS (Netherlands)

    Langevelde, van F.; Schotman, A.; Claassen, G.D.H.; Sparenburg, G.A.

    2000-01-01

    The objective of this paper is to present an approach that addresses competing land uses in the reserve site selection problem. This approach is implemented in a spatial optimization model for conservation planning in human-dominated landscapes: MENTOR. This model allocates new sites as stepping

  13. Analysis of the geomorphology surrounding the Chang'e-3 landing site

    International Nuclear Information System (INIS)

    Li Chun-Lai; Mu Ling-Li; Zou Xiao-Duan; Liu Jian-Jun; Ren Xin; Zeng Xing-Guo; Yang Yi-Man; Zhang Zhou-Bin; Liu Yu-Xuan; Zuo Wei; Li Han

    2014-01-01

    Chang'e-3 (CE-3) landed on the Mare Imbrium basin in the east part of Sinus Iridum (19.51°W, 44.12°N), which was China's first soft landing on the Moon and it started collecting data on the lunar surface environment. To better understand the environment of this region, this paper utilizes the available high-resolution topography data, image data and geological data to carry out a detailed analysis and research on the area surrounding the landing site (Sinus Iridum and 45 km×70 km of the landing area) as well as on the topography, landform, geology and lunar dust of the area surrounding the landing site. A general topographic analysis of the surrounding area is based on a digital elevation model and digital elevation model data acquired by Chang'e-2 that have high resolution; the geology analysis is based on lunar geological data published by USGS; the study on topographic factors and distribution of craters and rocks in the surrounding area covering 4 km×4 km or even smaller is based on images from the CE-3 landing camera and images from the topographic camera; an analysis is done of the effect of the CE-3 engine plume on the lunar surface by comparing images before and after the landing using data from the landing camera. A comprehensive analysis of the results shows that the landing site and its surrounding area are identified as typical lunar mare with flat topography. They are suitable for maneuvers by the rover, and are rich in geological phenomena and scientific targets, making it an ideal site for exploration

  14. Final Hanford Comprehensive Land-Use Plan Environmental Impact Statement, Hanford Site, Richland, Washington

    Energy Technology Data Exchange (ETDEWEB)

    N/A

    1999-10-01

    This Final ''Hanford Comprehensive Land-Use Plan Environmental Impact Statement'' (HCP EIS) is being used by the Department of Energy (DOE) and its nine cooperating and consulting agencies to develop a comprehensive land-use plan (CLUP) for the Hanford Site. The DOE will use the Final HCP EIS as a basis for a Record of Decision (ROD) on a CLUP for the Hanford Site. While development of the CLUP will be complete with release of the HCP EIS ROD, full implementation of the CLUP is expected to take at least 50 years. Implementation of the CLUP would begin a more detailed planning process for land-use and facility-use decisions at the Hanford Site. The DOE would use the CLUP to screen proposals. Eventually, management of Hanford Site areas would move toward the CLUP land-use goals. This CLUP process could take more than 50 years to fully achieve the land-use goals.

  15. 3B11-N, a monoclonal antibody against MERS-CoV, reduces lung pathology in rhesus monkeys following intratracheal inoculation of MERS-CoV Jordan-n3/2012

    International Nuclear Information System (INIS)

    Johnson, Reed F.; Bagci, Ulas; Keith, Lauren; Tang, Xianchun; Mollura, Daniel J.; Zeitlin, Larry; Qin, Jing; Huzella, Louis; Bartos, Christopher J.; Bohorova, Natasha; Bohorov, Ognian; Goodman, Charles; Kim, Do H.; Paulty, Michael H.; Velasco, Jesus; Whaley, Kevin J.; Johnson, Joshua C.; Pettitt, James; Ork, Britini L.; Solomon, Jeffrey

    2016-01-01

    Middle East Respiratory Syndrome Coronavirus (MERS-CoV) was identified in 2012 as the causative agent of a severe, lethal respiratory disease occurring across several countries in the Middle East. To date there have been over 1600 laboratory confirmed cases of MERS-CoV in 26 countries with a case fatality rate of 36%. Given the endemic region, it is possible that MERS-CoV could spread during the annual Hajj pilgrimage, necessitating countermeasure development. In this report, we describe the clinical and radiographic changes of rhesus monkeys following infection with 5×10"6 PFU MERS-CoV Jordan-n3/2012. Two groups of NHPs were treated with either a human anti-MERS monoclonal antibody 3B11-N or E410-N, an anti-HIV antibody. MERS-CoV Jordan-n3/2012 infection resulted in quantifiable changes by computed tomography, but limited other clinical signs of disease. 3B11-N treated subjects developed significantly reduced lung pathology when compared to infected, untreated subjects, indicating that this antibody may be a suitable MERS-CoV treatment. - Highlights: • MERS-CoV Jordan-n3/2012 challenge of rhesus monkeys results in a mild disease. • CT can be used to monitor disease progression to aid models of human disease. • Treatment with the human monoclonal antibody 3B11-N resulted in decreased disease.

  16. 3B11-N, a monoclonal antibody against MERS-CoV, reduces lung pathology in rhesus monkeys following intratracheal inoculation of MERS-CoV Jordan-n3/2012

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, Reed F., E-mail: johnsonreed@mail.nih.gov [Emerging Viral Pathogens Section National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD 21702 (United States); Bagci, Ulas [Center for Infectious Disease Imaging, National Institutes of Health Clinical Center, Bethesda MD 20892 (United States); Center for Research in Computer Vision (CRCV), Department of Electrics Electronics and Computer Science, University of Central Florida, Orlando, FL 32816, USA. (United States); Keith, Lauren [Integrated Research Facility, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD 21702 (United States); Tang, Xianchun [Department of Cancer Immunology & AIDS, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02215 (United States); Mollura, Daniel J. [Center for Infectious Disease Imaging, National Institutes of Health Clinical Center, Bethesda MD 20892 (United States); Zeitlin, Larry [Mapp Biopharmaceutical, Inc., San Diego CA 92121 (United States); Qin, Jing [Biostatistics Research Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892 (United States); Huzella, Louis; Bartos, Christopher J. [Integrated Research Facility, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD 21702 (United States); Bohorova, Natasha; Bohorov, Ognian; Goodman, Charles; Kim, Do H.; Paulty, Michael H.; Velasco, Jesus; Whaley, Kevin J. [Mapp Biopharmaceutical, Inc., San Diego CA 92121 (United States); Johnson, Joshua C.; Pettitt, James; Ork, Britini L. [Integrated Research Facility, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD 21702 (United States); Solomon, Jeffrey [Clinical Research Directorate/Clinical Monitoring Research Program, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research,Frederick, MD 21702-USA. (United States); and others

    2016-03-15

    Middle East Respiratory Syndrome Coronavirus (MERS-CoV) was identified in 2012 as the causative agent of a severe, lethal respiratory disease occurring across several countries in the Middle East. To date there have been over 1600 laboratory confirmed cases of MERS-CoV in 26 countries with a case fatality rate of 36%. Given the endemic region, it is possible that MERS-CoV could spread during the annual Hajj pilgrimage, necessitating countermeasure development. In this report, we describe the clinical and radiographic changes of rhesus monkeys following infection with 5×10{sup 6} PFU MERS-CoV Jordan-n3/2012. Two groups of NHPs were treated with either a human anti-MERS monoclonal antibody 3B11-N or E410-N, an anti-HIV antibody. MERS-CoV Jordan-n3/2012 infection resulted in quantifiable changes by computed tomography, but limited other clinical signs of disease. 3B11-N treated subjects developed significantly reduced lung pathology when compared to infected, untreated subjects, indicating that this antibody may be a suitable MERS-CoV treatment. - Highlights: • MERS-CoV Jordan-n3/2012 challenge of rhesus monkeys results in a mild disease. • CT can be used to monitor disease progression to aid models of human disease. • Treatment with the human monoclonal antibody 3B11-N resulted in decreased disease.

  17. Ole Rømer som enevældens administrator

    DEFF Research Database (Denmark)

    Olden-Jørgensen, Sebastian

    2002-01-01

    En gennemgang af Ole Rømers liv med vægt på hans rolle som embedsmand og hans deltagelse eller mangel på samme i det politiske spil.......En gennemgang af Ole Rømers liv med vægt på hans rolle som embedsmand og hans deltagelse eller mangel på samme i det politiske spil....

  18. Artificial Intelligence Support for Landing Site Selection on Mars

    Science.gov (United States)

    Rongier, G.; Pankratius, V.

    2017-12-01

    Mars is a key target for planetary exploration; a better understanding of its evolution and habitability requires roving in situ. Landing site selection is becoming more challenging for scientists as new instruments generate higher data volumes. The involved engineering and scientific constraints make site selection and the anticipation of possible onsite actions into a complex optimization problem: there may be multiple acceptable solutions depending on various goals and assumptions. Solutions must also account for missing data, errors, and potential biases. To address these problems, we propose an AI-informed decision support system that allows scientists, mission designers, engineers, and committees to explore alternative site selection choices based on data. In particular, we demonstrate first results of an exploratory case study using fuzzy logic and a simulation of a rover's mobility map based on the fast marching algorithm. Our system computes favorability maps of the entire planet to facilitate landing site selection and allows a definition of different configurations for rovers, science target priorities, landing ellipses, and other constraints. For a rover similar to NASA's Mars 2020 rover, we present results in form of a site favorability map as well as four derived exploration scenarios that depend on different prioritized scientific targets, all visualizing inherent tradeoffs. Our method uses the NASA PDS Geosciences Node and the NASA/ICA Integrated Database of Planetary Features. Under common assumptions, the data products reveal Eastern Margaritifer Terra and Meridiani Planum to be the most favorable sites due to a high concentration of scientific targets and a flat, easily navigable surface. Our method also allows mission designers to investigate which constraints have the highest impact on the mission exploration potential and to change parameter ranges. Increasing the elevation limit for landing, for example, provides access to many additional

  19. A Tn5051-like mer-containing transposon identified in a heavy metal tolerant strain Achromobacter sp. AO22

    Directory of Open Access Journals (Sweden)

    Bhave Mrinal

    2009-03-01

    Full Text Available Abstract Background Achromobacter sp. AO22 (formerly Alcaligenes sp. AO22, a bacterial strain isolated from a lead-contaminated industrial site in Australia, was previously found to be resistant to moderate to high levels of mercury, copper and other heavy metals. However, the nature and location of the genetic basis for mercuric ion resistance in this strain, had not been previously identified. Findings Achromobacter sp. AO22 contains a functional mer operon with all four essential genes (merRTPA and shows >99% DNA sequence identity to that of Tn501. The mer operon was present on a transposon, designated TnAO22, captured by introducing a broad-host-range IncP plasmid into Achromobacter sp. AO22 and subsequently transferring it to E. coli recipients. The transposition frequency of TnAO22 was 10-2 to 10-3 per target plasmid transferred. Analysis of TnAO22 sequence revealed it belonged to the Tn21 subgroup of the Tn3 superfamily of transposons, with the transposition module having >99% identity with Tn5051 of a Pseudomonas putida strain isolated from a water sample in New York. Conclusion TnAO22 is thus a new variant of Tn5051 of the Tn3 superfamily and the transposon and its associated mercury resistance system are among the few such systems reported in a soil bacterium. Achromobacter sp. AO22 can thus be exploited for applications such as in situ mercury bioremediation of contaminated sites, or the mobile unit and mer operon could be mobilized to other bacteria for similar purposes.

  20. A Novel Role of MerC in Methylmercury Transport and Phytoremediation of Methylmercury Contamination.

    Science.gov (United States)

    Sone, Yuka; Uraguchi, Shimpei; Takanezawa, Yasukazu; Nakamura, Ryosuke; Pan-Hou, Hidemitsu; Kiyono, Masako

    2017-01-01

    MerC, encoded by merC in the transposon Tn21 mer operon, is a heavy metal transporter with potential applications for phytoremediation of heavy metals such as mercuric ion and cadmium. In this study, we demonstrate that MerC also acts as a transporter for methylmercury. When MerC was expressed in Escherichia coli XL1-Blue, cells became hypersensitive to CH 3 Hg(I) and the uptake of CH 3 Hg(I) by these cells was higher than that by cells of the isogenic strain. Moreover, transgenic Arabidopsis plants expressing bacterial MerC or MerC fused to plant soluble N-ethylmaleimide-sensitive factor attachment protein receptors (SNAREs) accumulated CH 3 Hg(I) effectively and their growth was comparable to the wild-type plants. These results demonstrate that when the bacterium-derived merC gene is ectopically introduced in genetically modified plants, MerC expression in the transgenic plants promotes the transport and sequestration of methylmercury. Thus, our results show that the expression of merC in Arabidopsis results in transgenic plants that could be used for the phytoremediation and elimination of toxic methylmercury from the environment.

  1. Site selection model for new metro stations based on land use

    Science.gov (United States)

    Zhang, Nan; Chen, Xuewu

    2015-12-01

    Since the construction of metro system generally lags behind the development of urban land use, sites of metro stations should adapt to their surrounding situations, which was rarely discussed by previous research on station layout. This paper proposes a new site selection model to find the best location for a metro station, establishing the indicator system based on land use and combining AHP with entropy weight method to obtain the schemes' ranking. The feasibility and efficiency of this model has been validated by evaluating Nanjing Shengtai Road station and other potential sites.

  2. A novel k-mer set memory (KSM) motif representation improves regulatory variant prediction.

    Science.gov (United States)

    Guo, Yuchun; Tian, Kevin; Zeng, Haoyang; Guo, Xiaoyun; Gifford, David Kenneth

    2018-04-13

    The representation and discovery of transcription factor (TF) sequence binding specificities is critical for understanding gene regulatory networks and interpreting the impact of disease-associated noncoding genetic variants. We present a novel TF binding motif representation, the k -mer set memory (KSM), which consists of a set of aligned k -mers that are overrepresented at TF binding sites, and a new method called KMAC for de novo discovery of KSMs. We find that KSMs more accurately predict in vivo binding sites than position weight matrix (PWM) models and other more complex motif models across a large set of ChIP-seq experiments. Furthermore, KSMs outperform PWMs and more complex motif models in predicting in vitro binding sites. KMAC also identifies correct motifs in more experiments than five state-of-the-art motif discovery methods. In addition, KSM-derived features outperform both PWM and deep learning model derived sequence features in predicting differential regulatory activities of expression quantitative trait loci (eQTL) alleles. Finally, we have applied KMAC to 1600 ENCODE TF ChIP-seq data sets and created a public resource of KSM and PWM motifs. We expect that the KSM representation and KMAC method will be valuable in characterizing TF binding specificities and in interpreting the effects of noncoding genetic variations. © 2018 Guo et al.; Published by Cold Spring Harbor Laboratory Press.

  3. Land reclamation on the Nevada Test Site: A field tour

    International Nuclear Information System (INIS)

    Winkel, V.K.; Ostler, W.K.

    1993-01-01

    An all-day tour to observe and land reclamation on the Nevada Test Site was conducted in conjunction with the 8th Wildland Shrub and Arid Land Restoration Symposium. Tour participants were introduced to the US Department of Energy reclamation programs for Yucca Mountain Site Characterization Project and Treatability Studies for Soil Media (TSSM) Project. The tour consisted of several stops that covered a variety of topics and studies including revegetation by seeding, topsoil stockpile stabilization, erosion control, shrub transplanting, shrub herbivory, irrigation, mulching, water harvesting, and weather monitoring

  4. Simulation Experiment on Landing Site Selection Using a Simple Geometric Approach

    Science.gov (United States)

    Zhao, W.; Tong, X.; Xie, H.; Jin, Y.; Liu, S.; Wu, D.; Liu, X.; Guo, L.; Zhou, Q.

    2017-07-01

    Safe landing is an important part of the planetary exploration mission. Even fine scale terrain hazards (such as rocks, small craters, steep slopes, which would not be accurately detected from orbital reconnaissance) could also pose a serious risk on planetary lander or rover and scientific instruments on-board it. In this paper, a simple geometric approach on planetary landing hazard detection and safe landing site selection is proposed. In order to achieve full implementation of this algorithm, two easy-to-compute metrics are presented for extracting the terrain slope and roughness information. Unlike conventional methods which must do the robust plane fitting and elevation interpolation for DEM generation, in this work, hazards is identified through the processing directly on LiDAR point cloud. For safe landing site selection, a Generalized Voronoi Diagram is constructed. Based on the idea of maximum empty circle, the safest landing site can be determined. In this algorithm, hazards are treated as general polygons, without special simplification (e.g. regarding hazards as discrete circles or ellipses). So using the aforementioned method to process hazards is more conforming to the real planetary exploration scenario. For validating the approach mentioned above, a simulated planetary terrain model was constructed using volcanic ash with rocks in indoor environment. A commercial laser scanner mounted on a rail was used to scan the terrain surface at different hanging positions. The results demonstrate that fairly hazard detection capability and reasonable site selection was obtained compared with conventional method, yet less computational time and less memory usage was consumed. Hence, it is a feasible candidate approach for future precision landing selection on planetary surface.

  5. SIMULATION EXPERIMENT ON LANDING SITE SELECTION USING A SIMPLE GEOMETRIC APPROACH

    Directory of Open Access Journals (Sweden)

    W. Zhao

    2017-07-01

    Full Text Available Safe landing is an important part of the planetary exploration mission. Even fine scale terrain hazards (such as rocks, small craters, steep slopes, which would not be accurately detected from orbital reconnaissance could also pose a serious risk on planetary lander or rover and scientific instruments on-board it. In this paper, a simple geometric approach on planetary landing hazard detection and safe landing site selection is proposed. In order to achieve full implementation of this algorithm, two easy-to-compute metrics are presented for extracting the terrain slope and roughness information. Unlike conventional methods which must do the robust plane fitting and elevation interpolation for DEM generation, in this work, hazards is identified through the processing directly on LiDAR point cloud. For safe landing site selection, a Generalized Voronoi Diagram is constructed. Based on the idea of maximum empty circle, the safest landing site can be determined. In this algorithm, hazards are treated as general polygons, without special simplification (e.g. regarding hazards as discrete circles or ellipses. So using the aforementioned method to process hazards is more conforming to the real planetary exploration scenario. For validating the approach mentioned above, a simulated planetary terrain model was constructed using volcanic ash with rocks in indoor environment. A commercial laser scanner mounted on a rail was used to scan the terrain surface at different hanging positions. The results demonstrate that fairly hazard detection capability and reasonable site selection was obtained compared with conventional method, yet less computational time and less memory usage was consumed. Hence, it is a feasible candidate approach for future precision landing selection on planetary surface.

  6. Tissue Distribution of the MERS-Coronavirus Receptor in Bats

    NARCIS (Netherlands)

    W. Widagdo; L. Begeman (Lineke); D. Schipper (Debby); P.R.W.A. van Run (Peter); Cunningham, A.A. (Andrew A); Kley, N. (Nils); C.B.E.M. Reusken (Chantal); B.L. Haagmans (Bart); J.M.A. van den Brand (Judith)

    2017-01-01

    textabstractMiddle East respiratory syndrome coronavirus (MERS-CoV) has been shown to infect both humans and dromedary camels using dipeptidyl peptidase-4 (DPP4) as its receptor.The distribution of DPP4 in the respiratory tract tissues of humans and camels reflects MERS-CoV tropism.Apart from

  7. Tissue Distribution of the MERS-Coronavirus Receptor in Bats

    NARCIS (Netherlands)

    Widagdo, W; Begeman, Lineke; Schipper, Debby; van Run, Peter R; Cunningham, Andrew A; Kley, Nils; Reusken, Chantal B E M; Haagmans, Bart L; van den Brand, Judith M A

    2017-01-01

    Middle East respiratory syndrome coronavirus (MERS-CoV) has been shown to infect both humans and dromedary camels using dipeptidyl peptidase-4 (DPP4) as its receptor. The distribution of DPP4 in the respiratory tract tissues of humans and camels reflects MERS-CoV tropism. Apart from dromedary

  8. Sustainable land use planning at the Semipalatinsk Nuclear Test Site

    International Nuclear Information System (INIS)

    Coughtrey, P.J.; Ridgway, R.B.; Baumann, P.

    2001-01-01

    Full text: The UK Department for International Development (DFID) has recently agreed to support a project to develop a participatory sustainable land use plan for areas affected by nuclear weapons testing at Semipalatinsk. This three year project is expected to be initiated in April 2001 and will form one component of the United Nations Development Programme (UNDP) Semipalatinsk Rehabilitation Programme. The project will be undertaken by a combination of Kazakh organizations working with UK consultants and will meet its overall aim through the following main activities: Development of institutional capacity in data management and analysis; Provision of information and education on environmental contamination, hazards and risks; Development of a participatory land use planning process and piloting of the process in specific areas and communities around the test site; Integration of mineral resource extraction in the land planning process with a focus- on water resource and environmental protection and participatory approaches to resolving land use conflicts; Development of legislative tools to permit the implementation of environmental management of resource exploitation. The project will make use of both modern satellite-based imagery and more traditional methods to determine the potential for different land uses within the test site. The results obtained will be incorporated with additional information on land use. radiological and hydrological conditions at the test site through a geographical information system (GIS) provided by the project. The GIS will form the core component for collation and distribution of information on options available for use of different areas of the test site and its vicinity. A participatory rural appraisal, using tried and tested techniques, will identify local interest groups in land use planning and identify the details of their stake in the process. The groups will include owners-herders, employee-herders, and subsistence

  9. A novel method of providing a library of n-mers or biopolymers

    DEFF Research Database (Denmark)

    2012-01-01

    The present invention relates to a method of providing a library of n-mer sequences, wherein the library is composed of an n-mer sequence. Also the invention concerns a method of providing a library of biopolymer sequences having one or more n-mers in common. Further provided are specific primers...

  10. Land use planning and chemical sites. Summary report

    DEFF Research Database (Denmark)

    Grønberg, Carsten D.

    2000-01-01

    A methodology for land-use planning involving chemical sites has been developed for making decisions in local and regional administrations. The methodology treats land-use planning as a multi criteria decision and structures the planning process in sevensteps, where one can loop through the steps...... several times. Essential for the methodology is the specification of objectives setting the frame in which the alternatives are assessed and compared. The complete list of objectives includes the followingitems: safety and accidents, public distortion and health, environmental impact, cultural and natural...

  11. Global Land Survey Impervious Mapping Project Web Site

    Science.gov (United States)

    DeColstoun, Eric Brown; Phillips, Jacqueline

    2014-01-01

    The Global Land Survey Impervious Mapping Project (GLS-IMP) aims to produce the first global maps of impervious cover at the 30m spatial resolution of Landsat. The project uses Global Land Survey (GLS) Landsat data as its base but incorporates training data generated from very high resolution commercial satellite data and using a Hierarchical segmentation program called Hseg. The web site contains general project information, a high level description of the science, examples of input and output data, as well as links to other relevant projects.

  12. A 7-mer knowledge-based potential for detecting native protein structures from decoys

    DEFF Research Database (Denmark)

    Røgen, Peter

    for faster sampling methods. Background: The C-alpha atoms define a polygonal curve in 3-space which is smoothened by the method presented in [1] and is illustrated below. The geometry of a 7-mer is described by two numbers that describe how stretched and curved the smoothening of the 7-mer is. These two...... numbers are called length and distance excess, c.f. [2], and give one point in the length - distance excess - plane, LDE-plane. Method: Given a sequence of amino acids, we break it down to all its 7-mers and search a database of known 3d-structures for similar 7-mer sequences. For the query 7-mer we...... define an energy function in the LDE-plane. This energy is given by the 7-mer found and depends linearly on some design parameters. The energy function of the full query sequence, F, is then a sum over all 7-mers. For a protein P and a decoy D we ideally want F(D)-F(P)=constant.RMSD( D , P ), where 0...

  13. Preventing cleavage of Mer promotes efferocytosis and suppresses acute lung injury in bleomycin treated mice

    International Nuclear Information System (INIS)

    Lee, Ye-Ji; Lee, Seung-Hae; Youn, Young-So; Choi, Ji-Yeon; Song, Keung-Sub; Cho, Min-Sun; Kang, Jihee Lee

    2012-01-01

    Mer receptor tyrosine kinase (Mer) regulates macrophage activation and promotes apoptotic cell clearance. Mer activation is regulated through proteolytic cleavage of the extracellular domain. To determine if membrane-bound Mer is cleaved during bleomycin-induced lung injury, and, if so, how preventing the cleavage of Mer enhances apoptotic cell uptake and down-regulates pulmonary immune responses. During bleomycin-induced acute lung injury in mice, membrane-bound Mer expression decreased, but production of soluble Mer and activity as well as expression of disintegrin and metalloproteinase 17 (ADAM17) were enhanced . Treatment with the ADAM inhibitor TAPI-0 restored Mer expression and diminished soluble Mer production. Furthermore, TAPI-0 increased Mer activation in alveolar macrophages and lung tissue resulting in enhanced apoptotic cell clearance in vivo and ex vivo by alveolar macrophages. Suppression of bleomycin-induced pro-inflammatory mediators, but enhancement of hepatocyte growth factor induction were seen after TAPI-0 treatment. Additional bleomycin-induced inflammatory responses reduced by TAPI-0 treatment included inflammatory cell recruitment into the lungs, levels of total protein and lactate dehydrogenase activity in bronchoalveolar lavage fluid, as well as caspase-3 and caspase-9 activity and alveolar epithelial cell apoptosis in lung tissue. Importantly, the effects of TAPI-0 on bleomycin-induced inflammation and apoptosis were reversed by coadministration of specific Mer-neutralizing antibodies. These findings suggest that restored membrane-bound Mer expression by TAPI-0 treatment may help resolve lung inflammation and apoptosis after bleomycin treatment. -- Highlights: ►Mer expression is restored by TAPI-0 treatment in bleomycin-stimulated lung. ►Mer signaling is enhanced by TAPI-0 treatment in bleomycin-stimulated lung. ►TAPI-0 enhances efferocytosis and promotes resolution of lung injury.

  14. Alternatives to land disposal of solid radioactive mixed wastes on the Hanford Site

    International Nuclear Information System (INIS)

    Jacobsen, P.H.

    1992-03-01

    This report is a detailed description of the generation and management of land disposal restricted mixed waste generated, treated, and stored at the Hanford Site. This report discusses the land disposal restricted waste (mixed waste) managed at the Hanford Site by point of generation and current storage locations. The waste is separated into groups on the future treatment of the waste before disposal. This grouping resulted in the definition of 16 groups or streams of land disposal restricted waste

  15. Constitutive synthesis of a transport function encoded by the Thiobacillus ferrooxidans merC gene cloned in Escherichia coli

    International Nuclear Information System (INIS)

    Kusano, Tomonobu; Ji, Guangyong; Silver, S.; Inoue, Chihiro

    1990-01-01

    Mercuric reductase activity determined by the Thiobacillus ferrooxidans merA gene (cloned and expressed constitutively in Escherichia coli) was measured by volatilization of 203 Hg 2+ . (The absence of a merR regulatory gene in the cloned Thiobacillus mer determinant provides a basis for the constitutive synthesis of this system.) In the absence of the Thiobacillus merC transport gene, the mercury volatilization activity was cryptic and was not seen with whole cells but only with sonication-disrupted cells. The Thiobacillus merC transport function was compared with transport via the merT-merP system of plasmid pDU1358. Both systems, cloned and expressed in E. coli, governed enhanced uptake of 203 Hg 2+ in a temperature- and concentration-dependent fashion. Uptake via MerT-MerP was greater and conferred greater hypersensitivity to Hg 2+ than did uptake with MerC. Mercury uptake was inhibited by N-ethylmaleimide but not by EDTA. Ag + salts inhibited mercury uptake by the MerT-MerP system but did not inhibit uptake via MerC. Radioactive mercury accumulated by the MerT-MerP and by the MerC systems was exchangeable with nonradioactive Hg 2+

  16. MERS-CoV infection: Mind the public knowledge gap.

    Science.gov (United States)

    Bawazir, Amen; Al-Mazroo, Eman; Jradi, Hoda; Ahmed, Anwar; Badri, Motasim

    In August 2015, the Corona outbreak caused by Middle East respiratory syndrome coronavirus (MERS-CoV) was the 9th episode since June 2012 in Saudi Arabia. Little is known about the public awareness toward the nature or prevention of the disease. The aim of this work was to assess the knowledge of the adult population in Riyadh toward the MERS-CoV. In this cross-sectional survey, a self-administrated questionnaire was distributed to randomly selected participants visiting malls in Riyadh. The questionnaire contained measurable epidemiological and clinical MERS-CoV knowledge level variables and relevant source of information. The study included 676 participants. Mean age was 32.5 (±SD 8.6) years and 353 (47.8%) were males. Almost all participants heard about the corona disease and causative agent. The study showed a fair overall knowledge (66.0%), less knowledge on epidemiological features of the disease (58.3%), and good knowledge (90.7%) on the clinical manifestation of the MERS-CoV. Internet was the major (89.0%) source of disease information, and other sources including health care providers, SMS, television, magazines and books were low rated (all knowledge. This study concludes that there was inadequate epidemiological knowledge received by the public and the reliance mostly on the clinical manifestations to recognizing the MERS-CoV disease. Comprehensive public health education programs is important to increase awareness of simple epidemiological determinants of the disease is warranted. Copyright © 2017. Published by Elsevier Ltd.

  17. Technical procedures for land use, Deaf Smith County site, Texas: Environmental Field Program: Final draft

    International Nuclear Information System (INIS)

    1987-09-01

    This volume contains Technical Procedures pursuant to the Land Use Site Study Plan including land use data acquisition, land use/land cover map compilation, verification of land use/land cover map accuracy, and land use/land cover data analysis. 22 refs., 5 figs

  18. Antibodies against MERS coronavirus in dromedary camels, United Arab Emirates, 2003 and 2013.

    Science.gov (United States)

    Meyer, Benjamin; Müller, Marcel A; Corman, Victor M; Reusken, Chantal B E M; Ritz, Daniel; Godeke, Gert-Jan; Lattwein, Erik; Kallies, Stephan; Siemens, Artem; van Beek, Janko; Drexler, Jan F; Muth, Doreen; Bosch, Berend-Jan; Wernery, Ulrich; Koopmans, Marion P G; Wernery, Renate; Drosten, Christian

    2014-04-01

    Middle East respiratory syndrome coronavirus (MERS-CoV) has caused an ongoing outbreak of severe acute respiratory tract infection in humans in the Arabian Peninsula since 2012. Dromedary camels have been implicated as possible viral reservoirs. We used serologic assays to analyze 651 dromedary camel serum samples from the United Arab Emirates; 151 of 651 samples were obtained in 2003, well before onset of the current epidemic, and 500 serum samples were obtained in 2013. Recombinant spike protein-specific immunofluorescence and virus neutralization tests enabled clear discrimination between MERS-CoV and bovine CoV infections. Most (632/651, 97.1%) camels had antibodies against MERS-CoV. This result included all 151 serum samples obtained in 2003. Most (389/651, 59.8%) serum samples had MERS-CoV-neutralizing antibody titers >1,280. Dromedary camels from the United Arab Emirates were infected at high rates with MERS-CoV or a closely related, probably conspecific, virus long before the first human MERS cases.

  19. MERS Coronavirus Neutralizing Antibodies in Camels, Eastern Africa, 1983-1997

    NARCIS (Netherlands)

    Müller, Marcel A; Corman, Victor Max; Jores, Joerg; Meyer, Benjamin; Younan, Mario; Liljander, Anne; Bosch, Berend-Jan; Lattwein, Erik; Hilali, Mosaad; Musa, Bakri E; Bornstein, Set; Drosten, Christian

    2014-01-01

    To analyze the distribution of Middle East respiratory syndrome coronavirus (MERS-CoV)-seropositive dromedary camels in eastern Africa, we tested 189 archived serum samples accumulated during the past 30 years. We identified MERS-CoV neutralizing antibodies in 81.0% of samples from the main

  20. Soil stabilization mat for lunar launch/landing site

    Science.gov (United States)

    Acord, Amy L.; Cohenour, Mark W.; Ephraim, Daniel; Gochoel, Dennis; Roberts, Jefferson G.

    1990-01-01

    Facilities which are capable of handling frequent arrivals and departures of spaceships between Earth and a lunar colony are necessary. The facility must be able to provide these services with minimal interruption of operational activity within the colony. The major concerns associated with the space traffic are the dust and rock particles that will be kicked up by the rocket exhaust. As a result of the reduced gravitation of the Moon, these particles scatter over large horizontal distances. This flying debris will not only seriously interrupt the routine operations of the colony, but could cause damage to the equipment and facilities surrounding the launch site. An approach to overcome this problem is presented. A proposed design for a lunar take-off/landing mat is presented. This proposal goes beyond dealing with the usual problems of heat and load resistances associated with take-off and landing, by solving the problem of soil stabilization at the site. Through adequate stabilization, the problem of flying debris is eliminated.

  1. mer-Triammine trifluorido vanadium(III), mer-[VF{sub 3}(NH{sub 3}){sub 3}]. Synthesis and crystal structure

    Energy Technology Data Exchange (ETDEWEB)

    Woidy, Patrick [Technische Univ. Muenchen, Garching (Germany). Zentrale Technisch-Wissenschaftliche Betriebseinheit Radiochemie Muenchen RCM; Kraus, Florian [Marburg Univ. (Germany). Anorganische und Fluorchemie

    2015-07-01

    Vanadium trifluoride reacts with dry liquid ammonia under the formation of lilac plate-shaped crystals of mer-triammine trifluorido vanadium(III) (1), mer-[VF{sub 3}(NH{sub 3}){sub 3}]. Single-crystal X-ray analysis was carried out at low temperature to elucidate the structure. The compound crystallizes in the monoclinic space group P2{sup 1}/c with a = 5.7284(4), b = 9.2033(5), c = 10.5271(6) Aa, beta = 91.795(6)°, and V = 554.72(6) Aa{sup 3} at 123 K with Z = 4. The discrete [VF{sub 3}(NH{sub 3}){sub 3}] molecules are interconnected by hydrogen bonds.

  2. Cross-sectional surveillance of Middle East respiratory syndrome coronavirus (MERS-CoV) in dromedary camels and other mammals in Egypt, August 2015 to January 2016.

    Science.gov (United States)

    Ali, Mohamed; El-Shesheny, Rabeh; Kandeil, Ahmed; Shehata, Mahmoud; Elsokary, Basma; Gomaa, Mokhtar; Hassan, Naglaa; El Sayed, Ahmed; El-Taweel, Ahmed; Sobhy, Heba; Fasina, Folorunso Oludayo; Dauphin, Gwenaelle; El Masry, Ihab; Wolde, Abebe Wossene; Daszak, Peter; Miller, Maureen; VonDobschuetz, Sophie; Morzaria, Subhash; Lubroth, Juan; Makonnen, Yilma Jobre

    2017-03-16

    A cross-sectional study was conducted in Egypt to determine the prevalence of Middle East respiratory syndrome coronavirus (MERS-CoV) in imported and resident camels and bats, as well as to assess possible transmission of the virus to domestic ruminants and equines. A total of 1,031 sera, 1,078 nasal swabs, 13 rectal swabs, and 38 milk samples were collected from 1,078 camels in different types of sites. In addition, 145 domestic animals and 109 bats were sampled. Overall, of 1,031 serologically-tested camels, 871 (84.5%) had MERS-CoV neutralising antibodies. Seroprevalence was significantly higher in imported (614/692; 88.7%) than resident camels (257/339; 5.8%) (p MERS-CoV seroprevalence (p MERS-CoV antibodies except one sheep sample which showed a 1:640 titre. Of 1,078 camels, 41 (3.8%) were positive for MERS-CoV genetic material. Sequences obtained were not found to cluster with clade A or B MERS-CoV sequences and were genetically diverse. The presence of neutralising antibodies in one sheep apparently in contact with seropositive camels calls for further studies on domestic animals in contact with camels. This article is copyright of The Authors, 2017.

  3. Land cover mapping and GIS processing for the Savannah River Site Database

    International Nuclear Information System (INIS)

    Christel, L.M.; Guber, A.L.

    1994-07-01

    The Savannah River Site (SRS) is owned by the U.S. Department of Energy and operated by Westinghouse Savannah River Company. Located in Barnwell, Aiken, and Allendale counties in South Carolina, SRS covers an area of approximately 77,700 hectares. Land cover information for SRS was interpreted from color and color infrared aerial photography acquired between 1980 and 1989. The data were then used as the source of the land cover data layer for the SRS sitewide Geographic Information System database. This database provides SRS managers with recent land use information and has been successfully used to support cost-effective site characterization and reclamation

  4. Monoclonal Antibody Shows Promise as Potential Therapeutic for MERS | Poster

    Science.gov (United States)

    A monoclonal antibody has proven effective in preventing Middle Eastern Respiratory Syndrome (MERS) in lab animals, suggesting further development as a potential intervention for the deadly disease in humans, according to new research. MERS is a newly emerged coronavirus first detected in humans in 2012. Most cases have occurred in the Middle East, but the disease has appeared elsewhere. In all, MERS has infected more than 1,700 individuals and killed more than 600, according to the World Health Organization. No vaccines or antiviral therapies currently exist. Several candidate vaccines are being developed, and some have been tested in animal models, a prerequisite to human clinical trials.

  5. MERS coronaviruses from camels in Africa exhibit region-dependent genetic diversity.

    Science.gov (United States)

    Chu, Daniel K W; Hui, Kenrie P Y; Perera, Ranawaka A P M; Miguel, Eve; Niemeyer, Daniela; Zhao, Jincun; Channappanavar, Rudragouda; Dudas, Gytis; Oladipo, Jamiu O; Traoré, Amadou; Fassi-Fihri, Ouafaa; Ali, Abraham; Demissié, Getnet F; Muth, Doreen; Chan, Michael C W; Nicholls, John M; Meyerholz, David K; Kuranga, Sulyman A; Mamo, Gezahegne; Zhou, Ziqi; So, Ray T Y; Hemida, Maged G; Webby, Richard J; Roger, Francois; Rambaut, Andrew; Poon, Leo L M; Perlman, Stanley; Drosten, Christian; Chevalier, Veronique; Peiris, Malik

    2018-03-20

    Middle East respiratory syndrome coronavirus (MERS-CoV) causes a zoonotic respiratory disease of global public health concern, and dromedary camels are the only proven source of zoonotic infection. Although MERS-CoV infection is ubiquitous in dromedaries across Africa as well as in the Arabian Peninsula, zoonotic disease appears confined to the Arabian Peninsula. MERS-CoVs from Africa have hitherto been poorly studied. We genetically and phenotypically characterized MERS-CoV from dromedaries sampled in Morocco, Burkina Faso, Nigeria, and Ethiopia. Viruses from Africa (clade C) are phylogenetically distinct from contemporary viruses from the Arabian Peninsula (clades A and B) but remain antigenically similar in microneutralization tests. Viruses from West (Nigeria, Burkina Faso) and North (Morocco) Africa form a subclade, C1, that shares clade-defining genetic signatures including deletions in the accessory gene ORF4b Compared with human and camel MERS-CoV from Saudi Arabia, virus isolates from Burkina Faso (BF785) and Nigeria (Nig1657) had lower virus replication competence in Calu-3 cells and in ex vivo cultures of human bronchus and lung. BF785 replicated to lower titer in lungs of human DPP4-transduced mice. A reverse genetics-derived recombinant MERS-CoV (EMC) lacking ORF4b elicited higher type I and III IFN responses than the isogenic EMC virus in Calu-3 cells. However, ORF4b deletions may not be the major determinant of the reduced replication competence of BF785 and Nig1657. Genetic and phenotypic differences in West African viruses may be relevant to zoonotic potential. There is an urgent need for studies of MERS-CoV at the animal-human interface. Copyright © 2018 the Author(s). Published by PNAS.

  6. Discovery of novel bat coronaviruses in south China that use the same receptor as MERS coronavirus.

    Science.gov (United States)

    Luo, Chu-Ming; Wang, Ning; Yang, Xing-Lou; Liu, Hai-Zhou; Zhang, Wei; Li, Bei; Hu, Ben; Peng, Cheng; Geng, Qi-Bin; Zhu, Guang-Jian; Li, Fang; Shi, Zheng-Li

    2018-04-18

    Middle East respiratory syndrome coronavirus (MERS-CoV) has represented a human health threat since 2012. Although several MERS-related CoVs, which belong to the same species as MERS-CoV, have been identified from bats, they do not use the MERS-CoV receptor, dipeptidyl peptidase 4 (DPP4). Here, we screened 1059 bat samples from at least 30 bat species collected in different regions in south China and identified 89 strains of lineage C betacoronaviruses, including Tylonycteris pachypus HKU4 , Pipistrellus pipistrellus HKU5, and MERS-related CoVs. We sequenced the full-length genomes of two positive samples collected from the great evening bat, Ia io , from Guangdong Province. The two genomes were highly similar and exhibited genomic structures identical to those of other lineage C betacoronaviruses. While they exhibited genome-wide nucleotide identities of only 75.3 to 81.2% with other MERS-related CoVs, their gene-coding regions were highly similar to their counterparts, except in the case of the spike proteins. Further protein--protein interaction assays demonstrated that the spike proteins of these MERS-related CoVs bind to the receptor DPP4. Recombination analysis suggested that the newly discovered MERS-related CoVs might have acquired their spike genes from a DPP4-recognizing bat HKU4. Our study provides further evidence that bats represent the evolutionary origins of MERS-CoV. IMPORTANCE Previous studies suggested that the Middle East respiratory syndrome coronavirus (MERS-CoV) may have originated in bats. However, its evolutionary path from bats to humans remains unclear. In this study, we discovered 89 novel lineage C betacoronaviruses (BetaCoVs) in eight bat species. We provide the evidence of a MERS-related CoV derived from the great evening bat that uses the same host receptor as human MERS-CoV. This virus also provides evidence for a natural recombination event between the bat MERS-related CoV and another bat coronavirus HKU4. Our study expands the host

  7. Noctis Landing: A Proposed Landing Site/Exploration Zone for Human Missions to the Surface of Mars

    Science.gov (United States)

    Lee, Pascal; Acedillo, Shannen; Braham, Stephen; Brown, Adrian; Elphic, Richard; Fong, Terry; Glass, Brian; Hoftun, Christopher; Johansen, Brage W.; Lorber, Kira; hide

    2015-01-01

    The proposed Noctis Landing Site/Exploration Zone (LS/EZ) is shown in Figure 1. Our preliminary study suggests that the proposed site meets all key Science and Resources (incl. Civil Engineering) requirements. The site is of significant interest, as the EZ not only offers a large number and wide range of regions of interest (ROIs) for short-term exploration, it is also located strategically at the crossroads between Tharsis and Valles Marineris, which are key for long-term exploration. The proposed site contains Regions of Interest (ROIs) that meet the following Science requirements: -­- Access to (1) deposits with a high preservation potential for evidence of past habitability and fossil biosignatures and (2) sites that are promising for present habitability. The site presents a wide variety of ROIs qith likely aqueous features and deposits, including sinous channels and valleys, slope gullies, lobate debris aprons, impact craters with lobate ejecta flows, and "bathtub ring" deposits. Neutron spectrometry also suggests hydrogen is present within the topmost 0.3 m or so of 4 to 10 wt% WEH (Water Equivalent Hydrogen). -­- Noachian and/or Hesperian rocks in a stratigraphic context that have a high likelihood of containing trapped atmospheric gases. Collapsed canyon rim material with preserved stratigraphy is abundantly present and accessible. -­- Exposures of at least two crustal units that have regional or global extents, that are suitable for radiometric dating, and that have relative ages that sample a significant range of martian geological time. Canyons floors in Ius Chasma, Tithonium Chasma, and plateau tops on Tharsis and in Sinai Planum offer access to distinct crustal units of regional extent. -­- Access to outcrops with linked morphological and/or geochemical signatures indicative of aqueous or groundwater/ mineral interactions. Iron and sulfur-bearing deposits on canyon floors in Noctis Labyrinthus, and in Ius Chasma (IC) and Tithonium Chasma (TC

  8. NMR studies of abasic sites in DNA duplexes: Deoxyadenosine stacks into the helix opposite acyclic lesions

    International Nuclear Information System (INIS)

    Kalnik, M.W.; Chang, Chienneng; Johnson, F.; Grollman, A.P.; Patel, D.J.

    1989-01-01

    Proton and phosphorus NMR studies are reported for two complementary nonanucleotide duplexes containing acyclic abasic sites. The first duplex, d(C-A-T-G-A-G-T-A-C)·d(G-T-A-C-P-C-A-T-G), contains an acyclic propanyl moiety, P, located opposite a deoxyadenosine at the center of the helix (designated AP P 9-mer duplex). The second duplex, d(C-A-T-G-A-G-T-A-C-)·d(G-T-A-C-E-C-A-T-G), contains a similarly located acyclic ethanyl moiety, E (designated AP E 9-mer duplex). The ethanyl moiety is one carbon shorter than the natural carbon-phosphodiester backbone of a single nucleotide unit of DNA. The majority of the exchangeable and nonexchangeable base and sugar protons in both the AP P 9-mer and AP E 9-mer duplexes, including those at the abasic site, have been assigned by recording and analyzing two-dimensional phase-sensitive NOESY data sets in H 2 O and D 2 O solution between -5 and 5 degree C. These spectroscopic observations establish that A5 inserts into the helix opposite the abasic site (P14 and El14) and stacks between the flanking G4·C15 and G6·C13 Watson-Crick base pairs in both the AP P 9-mer and AP E 9-mer duplexes. Proton NMR parameters for the Ap P 9-mer and AP E 9-mer duplexes are similar to those reported previously. These proton NMR experiments demonstrate that the structures at abasic sites are very similar whether the five-membered ring is open or closed or whether the phosphodiester backbone is shortened by one carbon atom. Phosphorus spectra of the AP P 9-mer and AP E 9-mer duplexes (5 degree C) indicate that the backbone conformation is similarly perturbed at three phosphodiester backbone torsion angles

  9. Apollo 16 landing site: Summary of earth based remote sensing data, part W

    Science.gov (United States)

    Zisk, S. H.; Masursky, H.; Milton, D. J.; Schaber, G. G.; Shorthill, R. W.; Thompson, T. W.

    1972-01-01

    Infrared and radar studies of the Apollo 16 landing site are summarized. Correlations and comparisons between earth based remote sensing data, IR observations, and other data are discussed in detail. Remote sensing studies were devoted to solving two problems: (1) determining the physical difference between Cayley and Descartes geologic units near the landing site; and (2) determining the nature of the bright unit of Descartes mountain material.

  10. Mild encephalitis/encephalopathy with reversible splenial lesion (MERS) in adults-a case report and literature review.

    Science.gov (United States)

    Yuan, Junliang; Yang, Shuna; Wang, Shuangkun; Qin, Wei; Yang, Lei; Hu, Wenli

    2017-05-25

    Mild encephalitis/encephalopathy with reversible splenial lesion (MERS) is a rare clinico-radiological entity characterized by the magnetic resonance imaging (MRI) finding of a reversible lesion in the corpus callosum, sometimes involved the symmetrical white matters. Many cases of child-onset MERS with various causes have been reported. However, adult-onset MERS is relatively rare. The clinical characteristics and pathophysiologiccal mechanisms of adult-onset MERS are not well understood. We reviewed the literature on adult-onset MERS in order to describe the characteristics of MERS in adults and to provide experiences for clinician. We reported a case of adult-onset MERS with acute urinary retension and performed literature search from PubMed and web of science databases to identify other adult-onset MERS reports from Januarary 2004 to March 2016. Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guideline was followed on selection process. And then we summarized the clinico-radiological features of adult-onset MERS. Twenty-nine adult-onset MERS cases were reviewed from available literature including the case we have. 86.2% of the cases (25/29) were reported in Asia, especially in Japan. Ages varied between 18 and 59 years old with a 12:17 female-to-male ratio. The major cause was infection by virus or bacteria. Fever and headache were the most common clinical manifestation, and acute urinary retention was observed in 6 patients. All patients recovered completely within a month. Adult-onset MERS is an entity with a broad clinico-radiological spectrum because of the various diseases and conditions. There are similar characteristics between MERS in adults and children, also some differences.

  11. Transfer and Transition: Interagency Coordination for Managing Public Lands at UMTRCA Title II Sites in Wyoming – 16614

    Energy Technology Data Exchange (ETDEWEB)

    Shafer, David S. [U.S. Dpartment of Energy, Office of Legacy Management; Vanek, Tim [U.S.Department of Energy, Office of Legacy Management; Ribeiro, Tracy [U.S. Department of Energy, Office of Legacy Management; Bahrke, Cheri [Navarro Research and Engineering

    2016-03-06

    By the end of fiscal year 2025, the U.S. Department of Energy (DOE) Office of Legacy Management (LM) is anticipating adding 17 sites remediated under Title II of the Uranium Mill Tailings Radiation Control Act (UMTRCA) to the current inventory of 90 sites that it manages. Among the new sites are ones where federal public lands occur within the proposed long-term care boundary, the boundary determined by the Nuclear Regulatory Commission and LM as necessary to maintain site protectiveness for the entombed uranium mill tailings and residual groundwater contamination. For these sites, public land withdrawals for land and minerals will need to be established. LM’s primary mission at UMTRCA sites is to protect the public and the environment from exposure to contamination at the sites. For the sites with public lands or federally controlled minerals that will be transferring to LM, the Office will apply to the Department of the Interior (DOI) Bureau of Land Management (BLM) for new, public land and mineral withdrawals. At most current LM UMTRCA sites that involved public lands and minerals, DOI granted DOE “full administrative jurisdiction” and permanent withdrawals. Hence, these withdrawals are, permanently, no longer subject to public land, mining, and mineral-leasing laws and regulations. LM is coordinating with DOI/BLM in Wyoming to permanently withdraw full and partial jurisdiction at future UMTRCA Title II sites in that state. This approach would allow LM to fully administer surface lands and minerals, where necessary, and DOI and LM to administer surface lands and leasable minerals where it would not jeopardize sites’ radiological safety and long-term public and environmental protection. This “shared-jurisdiction approach” will meet LM’s strategic goal of protecting human health and the environment but also allow BLM to fulfill their mission to “manage and conserve the lands under the mandate of multiple-use and sustained yield.” In addition, LM

  12. Site selection criteria for the shallow land burial of low-level radioactive waste

    International Nuclear Information System (INIS)

    Falconer, K.L.; Hull, L.C.; Mizell, S.A.

    The shallow land burial of low-level waste must be accomplished in a manner that ensures the public and biosphere are protected from harmful amounts of radiation. This can be attained by selecting, designing, operating and closing sites such that contaminants never leave the site boundary in levels above regulatory limits. Site design, operation and closure are all functions of the characteristics of the site selected. As a result, the site selection process offers the most effective means for optimizing safe, efficient and economical low-level waste burial practices. The purpose of this document is to set forth criteria for the selection of shallow land burial sites. Criteria are standard rules, by which the ability of a site to meet waste management goals can be judged. They are comprehensive, universal, and qualitative and are applicable in any geologic environment. Site selection criteria provide the framework for the siting process

  13. Ole Rømer som enevældens administrator

    DEFF Research Database (Denmark)

    Olden-Jørgensen, Sebastian

    2004-01-01

    En biografisk skitse af Ole Rømers virke med vægt på hans rolle som embedsmand og rådgiver for Christian V. Hans virke analyseres på baggrund af en ny forståelse for den tidlige enevældes politiske kultur.......En biografisk skitse af Ole Rømers virke med vægt på hans rolle som embedsmand og rådgiver for Christian V. Hans virke analyseres på baggrund af en ny forståelse for den tidlige enevældes politiske kultur....

  14. Real-Time Pathogen Detection in the Era of Whole-Genome Sequencing and Big Data: Comparison of k-mer and Site-Based Methods for Inferring the Genetic Distances among Tens of Thousands of Salmonella Samples.

    Science.gov (United States)

    Pettengill, James B; Pightling, Arthur W; Baugher, Joseph D; Rand, Hugh; Strain, Errol

    2016-01-01

    The adoption of whole-genome sequencing within the public health realm for molecular characterization of bacterial pathogens has been followed by an increased emphasis on real-time detection of emerging outbreaks (e.g., food-borne Salmonellosis). In turn, large databases of whole-genome sequence data are being populated. These databases currently contain tens of thousands of samples and are expected to grow to hundreds of thousands within a few years. For these databases to be of optimal use one must be able to quickly interrogate them to accurately determine the genetic distances among a set of samples. Being able to do so is challenging due to both biological (evolutionary diverse samples) and computational (petabytes of sequence data) issues. We evaluated seven measures of genetic distance, which were estimated from either k-mer profiles (Jaccard, Euclidean, Manhattan, Mash Jaccard, and Mash distances) or nucleotide sites (NUCmer and an extended multi-locus sequence typing (MLST) scheme). When analyzing empirical data (whole-genome sequence data from 18,997 Salmonella isolates) there are features (e.g., genomic, assembly, and contamination) that cause distances inferred from k-mer profiles, which treat absent data as informative, to fail to accurately capture the distance between samples when compared to distances inferred from differences in nucleotide sites. Thus, site-based distances, like NUCmer and extended MLST, are superior in performance, but accessing the computing resources necessary to perform them may be challenging when analyzing large databases.

  15. Real-Time Pathogen Detection in the Era of Whole-Genome Sequencing and Big Data: Comparison of k-mer and Site-Based Methods for Inferring the Genetic Distances among Tens of Thousands of Salmonella Samples.

    Directory of Open Access Journals (Sweden)

    James B Pettengill

    Full Text Available The adoption of whole-genome sequencing within the public health realm for molecular characterization of bacterial pathogens has been followed by an increased emphasis on real-time detection of emerging outbreaks (e.g., food-borne Salmonellosis. In turn, large databases of whole-genome sequence data are being populated. These databases currently contain tens of thousands of samples and are expected to grow to hundreds of thousands within a few years. For these databases to be of optimal use one must be able to quickly interrogate them to accurately determine the genetic distances among a set of samples. Being able to do so is challenging due to both biological (evolutionary diverse samples and computational (petabytes of sequence data issues. We evaluated seven measures of genetic distance, which were estimated from either k-mer profiles (Jaccard, Euclidean, Manhattan, Mash Jaccard, and Mash distances or nucleotide sites (NUCmer and an extended multi-locus sequence typing (MLST scheme. When analyzing empirical data (whole-genome sequence data from 18,997 Salmonella isolates there are features (e.g., genomic, assembly, and contamination that cause distances inferred from k-mer profiles, which treat absent data as informative, to fail to accurately capture the distance between samples when compared to distances inferred from differences in nucleotide sites. Thus, site-based distances, like NUCmer and extended MLST, are superior in performance, but accessing the computing resources necessary to perform them may be challenging when analyzing large databases.

  16. Muskox site fidelity and group cohesion in Jameson Land, East Greenland

    DEFF Research Database (Denmark)

    Aastrup, P. J.

    2004-01-01

    . Muskoxen in this area had a very loose group structure, with mother-young pairs as the only apparent bond between individuals. Furthermore, the tagged muskoxen lacked strong fidelity to the site where they were tagged and roamed within an 11.000-km2 area. Hunters reported tagged muskoxen shot up to 120 km...... away from the capture site. From the hunters' reports, we determined that the central part of Jameson Land around Mikael Bjerg was the preferred hunting area in winter. In summer, most muskoxen were shot near the coast of the central part of Jameson Land. The hunter compliance in this study confirms...

  17. The relationship between orbital, earth-based, and sample data for lunar landing sites

    Science.gov (United States)

    Clark, P. E.; Hawke, B. R.; Basu, A.

    1990-01-01

    Results are reported of a detailed examination of data available for the Apollo lunar landing sites, including the Apollo orbital measurements of six major elements derived from XRF and gamma-ray instruments and geochemical parameters derived from earth-based spectral reflectivity data. Wherever orbital coverage for Apollo landing sites exist, the remote data were correlated with geochemical data derived from the soil sample averages for major geological units and the major rock components associated with these units. Discrepancies were observed between the remote and the soil-anlysis elemental concentration data, which were apparently due to the differences in the extent of exposure of geological units, and, hence, major rock eomponents, in the area sampled. Differences were observed in signal depths between various orbital experiments, which may provide a mechanism for explaining differences between the XRF and other landing-site data.

  18. 10 CFR 61.52 - Land disposal facility operation and disposal site closure.

    Science.gov (United States)

    2010-01-01

    ... DISPOSAL OF RADIOACTIVE WASTE Technical Requirements for Land Disposal Facilities § 61.52 Land disposal... wastes by placing in disposal units which are sufficiently separated from disposal units for the other... between any buried waste and the disposal site boundary and beneath the disposed waste. The buffer zone...

  19. Public response to MERS-CoV in the Middle East: iPhone survey in six countries.

    Science.gov (United States)

    Alqahtani, Amani S; Rashid, Harunor; Basyouni, Mada H; Alhawassi, Tariq M; BinDhim, Nasser F

    Gulf Cooperation Council (GCC) countries bear the heaviest brunt of MERS-CoV. This study aims to compare public awareness and practice around MERS-CoV across GCC countries. A cross-sectional survey was conducted using the Gulf Indicators (GI) smartphone app among people in the six GCC countries, namely Saudi Arabia, Kuwait, the United Arab Emirates, Qatar, Bahrain, and Oman. A total of 1812 participants recruited. All were aware of MERS-CoV, yet the perception and practice around MERS-CoV varied widely between countries. Over two thirds were either "not concerned" or "slightly concerned" about contracting MERS-CoV; believing that they were under Allah's (God's) protection (40%) was the most cited reason. While 79% were aware that the disease can transmit through droplet from infected person, only 12% stated that MERS-CoV transmits via camels; people in Saudi Arabia were better aware of the transmission. Nevertheless, only 22% of respondents believed that camels are the zoonotic reservoir of MERS-CoV. Those who were concerned about contracting MERS-CoV (aOR: 1.6, 95% CI: 1.2-2.1, pAuthors. Published by Elsevier Ltd.. All rights reserved.

  20. Worry experienced during the 2015 Middle East Respiratory Syndrome (MERS pandemic in Korea.

    Directory of Open Access Journals (Sweden)

    Jun-Soo Ro

    Full Text Available Korea failed in its risk communication during the early stage of the Middle East Respiratory Syndrome (MERS outbreak; consequently, it faced difficulties in managing MERS, while disease-related worry increased. Disease-related worry can help disease prevention and management, but can also have a detrimental effect. This study measured the overall level of disease-related worry during the MERS outbreak period in Korea and the influencing factors and levels of disease-related worry during key outbreak periods.The cross-sectional survey included 1,000 adults who resided in Korea. An ordinal logistic regression was performed for the overall level of MERS-related worry, and influencing factors of worry were analyzed. A reliability test was performed on the levels of MERS-related worry during key outbreak periods.The overall level of MERS-related worry was 2.44. Multivariate analysis revealed that women and respondents w very poor subjective health status had higher levels of worry. Respondents with very high stress in daily life had higher levels of worry than those who reported having little stress. The reliability test results on MERS-related worry scores during key outbreak periods showed consistent scores during each period.Level of worry increased in cases having higher perceived susceptibility and greater trust in informal information, while initial stage of outbreak was closely associated with that at later stages. These findings suggest the importance of managing the level of worry by providing timely and accurate disease-related information during the initial stage of disease outbreak.

  1. Asy2/Mer2: an evolutionarily conserved mediator of meiotic recombination, pairing, and global chromosome compaction.

    Science.gov (United States)

    Tessé, Sophie; Bourbon, Henri-Marc; Debuchy, Robert; Budin, Karine; Dubois, Emeline; Liangran, Zhang; Antoine, Romain; Piolot, Tristan; Kleckner, Nancy; Zickler, Denise; Espagne, Eric

    2017-09-15

    Meiosis is the cellular program by which a diploid cell gives rise to haploid gametes for sexual reproduction. Meiotic progression depends on tight physical and functional coupling of recombination steps at the DNA level with specific organizational features of meiotic-prophase chromosomes. The present study reveals that every step of this coupling is mediated by a single molecule: Asy2/Mer2. We show that Mer2, identified so far only in budding and fission yeasts, is in fact evolutionarily conserved from fungi (Mer2/Rec15/Asy2/Bad42) to plants (PRD3/PAIR1) and mammals (IHO1). In yeasts, Mer2 mediates assembly of recombination-initiation complexes and double-strand breaks (DSBs). This role is conserved in the fungus Sordaria However, functional analysis of 13 mer2 mutants and successive localization of Mer2 to axis, synaptonemal complex (SC), and chromatin revealed, in addition, three further important functions. First, after DSB formation, Mer2 is required for pairing by mediating homolog spatial juxtaposition, with implications for crossover (CO) patterning/interference. Second, Mer2 participates in the transfer/maintenance and release of recombination complexes to/from the SC central region. Third, after completion of recombination, potentially dependent on SUMOylation, Mer2 mediates global chromosome compaction and post-recombination chiasma development. Thus, beyond its role as a recombinosome-axis/SC linker molecule, Mer2 has important functions in relation to basic chromosome structure. © 2017 Tessé et al.; Published by Cold Spring Harbor Laboratory Press.

  2. Middle East Respiratory Syndrome (MERS) coronavirus seroprevalence in domestic livestock in Saudi Arabia, 2010 to 2013.

    Science.gov (United States)

    Hemida, M G; Perera, R A; Wang, P; Alhammadi, M A; Siu, L Y; Li, M; Poon, L L; Saif, L; Alnaeem, A; Peiris, M

    2013-12-12

    In Saudi Arabia, including regions of Riyadh and Al Ahsa, pseudoparticle neutralisation (ppNT) and microneutralisation (MNT) tests detected no antibodies to Middle East Respiratory Syndrome coronavirus (MERS-CoV) in sheep (n= 100), goats (n= 45), cattle (n= 50) and chickens (n= 240). Dromedary camels however, had a high prevalence of MERS-CoV antibodies. Bovine coronavirus (BCoV) infected sera from cattle had no cross-reactivity in MERS-CoV ppNT or MNT, while many dromedary camels’ sera reacted to both BCoV and MERS-CoV. Some nevertheless displayed specific serologic reaction profiles to MERS-CoV.

  3. Mars: Periglacial Morphology and Implications for Future Landing Sites

    Science.gov (United States)

    Heldmann, Jennifer L.; Schurmeier, Lauren; McKay, Christopher; Davila, Alfonso; Stoker, Carol; Marinova, Margarita; Wilhelm, Mary Beth

    2015-01-01

    At the Mars Phoenix landing site and in much of the Martian northern plains, there is ice-cemented ground beneath a layer of dry permafrost. Unlike most permafrost on Earth, though, this ice is not liquid at any time of year. However, in past epochs at higher obliquity the surface conditions during summer may have resulted in warmer conditions and possible melting. This situation indicates that the ice-cemented ground in the north polar plains is likely to be a candidate for the most recently habitable place on Mars as near-surface ice likely provided adequate water activity approximately 5 Myr ago. The high elevation Dry Valleys of Antarctica provide the best analog on Earth of Martian ground ice. These locations are the only places on Earth where ice-cemented ground is found beneath dry permafrost. The Dry Valleys are a hyper-arid polar desert environment and in locations above 1500 m elevation, such as University Valley, air temperatures do not exceed 0 C. Thus, similarly to Mars, liquid water is largely absent here and instead the hydrologic cycle is dominated by frozen ice and vapor phase processes such as sublimation. These conditions make the high elevation Dry Valleys a key Mars analog location where periglacial processes and geomorphic features can be studied in situ. This talk will focus on studies of University Valley as a Mars analog for periglacial morphology and ice stability. We will review a landing site selection study encompassing this information gleaned from the Antarctic terrestrial analog studies plus Mars spacecraft data analysis to identify candidate landing sites for a future mission to search for life on Mars.

  4. Surface Properties and Characteristics of Mars Landing Sites from Remote Sensing Data and Ground Truth

    Science.gov (United States)

    Golombek, M. P.; Haldemann, A. F.; Simpson, R. A.; Furgason, R. L.; Putzig, N. E.; Huertas, A.; Arvidson, R. E.; Heet, T.; Bell, J. F.; Mellon, M. T.; McEwen, A. S.

    2008-12-01

    Surface characteristics at the six sites where spacecraft have successfully landed on Mars can be related favorably to their signatures in remotely sensed data from orbit and from the Earth. Comparisons of the rock abundance, types and coverage of soils (and their physical properties), thermal inertia, albedo, and topographic slope all agree with orbital remote sensing estimates and show that the materials at the landing sites can be used as ground truth for the materials that make up most of the equatorial and mid- to moderately high-latitude regions of Mars. The six landing sites sample two of the three dominant global thermal inertia and albedo units that cover ~80% of the surface of Mars. The Viking, Spirit, Mars Pathfinder, and Phoenix landing sites are representative of the moderate to high thermal inertia and intermediate to high albedo unit that is dominated by crusty, cloddy, blocky or frozen soils (duricrust that may be layered) with various abundances of rocks and bright dust. The Opportunity landing site is representative of the moderate to high thermal inertia and low albedo surface unit that is relatively dust free and composed of dark eolian sand and/or increased abundance of rocks. Rock abundance derived from orbital thermal differencing techniques in the equatorial regions agrees with that determined from rock counts at the surface and varies from ~3-20% at the landing sites. The size-frequency distributions of rocks >1.5 m diameter fully resolvable in HiRISE images of the landing sites follow exponential models developed from lander measurements of smaller rocks and are continuous with these rock distributions indicating both are part of the same population. Interpretation of radar data confirms the presence of load bearing, relatively dense surfaces controlled by the soil type at the landing sites, regional rock populations from diffuse scattering similar to those observed directly at the sites, and root-mean-squared slopes that compare favorably

  5. Biomolecular Mechanisms of Mercury Transfers and Transformations by Proteins of the Mer Operon

    Science.gov (United States)

    Miller, S. M.; Hong, B.; Nauss, R.; Momany, C.; Summers, A. O.; Feng, X.; Harwood, I.; Stroud, R.

    2008-12-01

    Aerobic bacteria exhibiting resistance to the toxic effects of Hg(II) and organomercurials [RHg(I), e.g. MeHg(I)] and are widely found in both pristine and mercury contaminated environments. Resistance, afforded by a plasmid- or transposon-associated mer operon, involves an unusual pathway where Hg(II) and organomercurials [RHg(I)] undergo facilitated entry into the bacterial cytoplasm via an integral membrane transport protein (MerT) and are then "detoxified" by the concerted effort of two enzymes, organomercurial lyase (MerB), which catalyzes dealkylation (i.e., demethylation) of RHg(I) to Hg(II) and a hydrocarbon, and mercuric ion reductase (MerA), which catalyzes reduction of Hg(II) to Hg(0) as the ultimate detoxification for the organism. With a widespread distribution, these bacterial transformations play a significant role in the fate of mercury in the environment. Our focus is on elucidation of the molecular mechanisms for the transport and catalytic transformations of RHg(I) and Hg(II) by these proteins and the factors that influence the overall efficiency of the process. Current efforts are focused primarily on elucidating details of RHg(I) binding and dealkylation by MerB as well as the mechanism for transfer of the Hg(II) product to MerA. Key findings include the demonstration of a non-cysteine residue as essential for the catalytic activity and demonstration that direct transfer of Hg(II) to MerA proceeds more rapidly and more completely than transfer to small MW thiols such as cysteines or glutathione. Reuslts of these studies as well as an overview of our current understanding of the whole system will be presented.

  6. Using MCDA and GIS for hazardous waste landfill siting considering land scarcity for waste disposal

    International Nuclear Information System (INIS)

    Feo, Giovanni De; Gisi, Sabino De

    2014-01-01

    Highlights: • Wasting land for the siting of hazardous waste landfills must be avoided. • The siting procedure is based on a land use map of potentially suitable areas. • All the waste facilities of the management system are simultaneously considered. • A case study is developed considering two multi-criteria techniques. • An innovative criteria weighting tool (PSW) is used in combination with the AHP. - Abstract: The main aim of this study was to develop a procedure that minimizes the wasting of space for the siting of hazardous waste landfills as part of a solid waste management system. We wanted to tackle the shortage of land for waste disposal that is a serious and growing problem in most large urban regions. The procedure combines a multi-criteria decision analysis (MCDA) approach with a geographical information system (GIS). The GIS was utilised to obtain an initial screening in order to eliminate unsuitable areas, whereas the MCDA was developed to select the most suitable sites. The novelty of the proposed siting procedure is the introduction of a new screening phase before the macro-siting step aimed at producing a “land use map of potentially suitable areas” for the siting of solid waste facilities which simultaneously takes into consideration all plant types. The issue of obtaining sites evaluations of a specific facility was coupled with the issue of not wasting land appropriate to facilitate other types of waste management options. In the developed case study, the use of an innovative criteria weighting tool (the “Priority Scale”) in combination with the Analytic Hierarchy Process was useful to easier define the priorities of the evaluation criteria in comparison with other classic methods such as the Paired Comparison Technique in combination with the Simple Additive Weighting method

  7. Using MCDA and GIS for hazardous waste landfill siting considering land scarcity for waste disposal

    Energy Technology Data Exchange (ETDEWEB)

    Feo, Giovanni De, E-mail: g.defeo@unisa.it [Department of Industrial Engineering, University of Salerno, via Giovanni Paolo II, 132, 84084 Fisciano, SA (Italy); Gisi, Sabino De [Italian National Agency for New Technologies, Energy and Sustainable Economic Development, ENEA, Water Resource Management Lab., via Martiri di Monte Sole 4, 40129 Bologna, BO (Italy)

    2014-11-15

    Highlights: • Wasting land for the siting of hazardous waste landfills must be avoided. • The siting procedure is based on a land use map of potentially suitable areas. • All the waste facilities of the management system are simultaneously considered. • A case study is developed considering two multi-criteria techniques. • An innovative criteria weighting tool (PSW) is used in combination with the AHP. - Abstract: The main aim of this study was to develop a procedure that minimizes the wasting of space for the siting of hazardous waste landfills as part of a solid waste management system. We wanted to tackle the shortage of land for waste disposal that is a serious and growing problem in most large urban regions. The procedure combines a multi-criteria decision analysis (MCDA) approach with a geographical information system (GIS). The GIS was utilised to obtain an initial screening in order to eliminate unsuitable areas, whereas the MCDA was developed to select the most suitable sites. The novelty of the proposed siting procedure is the introduction of a new screening phase before the macro-siting step aimed at producing a “land use map of potentially suitable areas” for the siting of solid waste facilities which simultaneously takes into consideration all plant types. The issue of obtaining sites evaluations of a specific facility was coupled with the issue of not wasting land appropriate to facilitate other types of waste management options. In the developed case study, the use of an innovative criteria weighting tool (the “Priority Scale”) in combination with the Analytic Hierarchy Process was useful to easier define the priorities of the evaluation criteria in comparison with other classic methods such as the Paired Comparison Technique in combination with the Simple Additive Weighting method.

  8. Comparing fixed sampling with minimizer sampling when using k-mer indexes to find maximal exact matches.

    Science.gov (United States)

    Almutairy, Meznah; Torng, Eric

    2018-01-01

    Bioinformatics applications and pipelines increasingly use k-mer indexes to search for similar sequences. The major problem with k-mer indexes is that they require lots of memory. Sampling is often used to reduce index size and query time. Most applications use one of two major types of sampling: fixed sampling and minimizer sampling. It is well known that fixed sampling will produce a smaller index, typically by roughly a factor of two, whereas it is generally assumed that minimizer sampling will produce faster query times since query k-mers can also be sampled. However, no direct comparison of fixed and minimizer sampling has been performed to verify these assumptions. We systematically compare fixed and minimizer sampling using the human genome as our database. We use the resulting k-mer indexes for fixed sampling and minimizer sampling to find all maximal exact matches between our database, the human genome, and three separate query sets, the mouse genome, the chimp genome, and an NGS data set. We reach the following conclusions. First, using larger k-mers reduces query time for both fixed sampling and minimizer sampling at a cost of requiring more space. If we use the same k-mer size for both methods, fixed sampling requires typically half as much space whereas minimizer sampling processes queries only slightly faster. If we are allowed to use any k-mer size for each method, then we can choose a k-mer size such that fixed sampling both uses less space and processes queries faster than minimizer sampling. The reason is that although minimizer sampling is able to sample query k-mers, the number of shared k-mer occurrences that must be processed is much larger for minimizer sampling than fixed sampling. In conclusion, we argue that for any application where each shared k-mer occurrence must be processed, fixed sampling is the right sampling method.

  9. Comparing fixed sampling with minimizer sampling when using k-mer indexes to find maximal exact matches.

    Directory of Open Access Journals (Sweden)

    Meznah Almutairy

    Full Text Available Bioinformatics applications and pipelines increasingly use k-mer indexes to search for similar sequences. The major problem with k-mer indexes is that they require lots of memory. Sampling is often used to reduce index size and query time. Most applications use one of two major types of sampling: fixed sampling and minimizer sampling. It is well known that fixed sampling will produce a smaller index, typically by roughly a factor of two, whereas it is generally assumed that minimizer sampling will produce faster query times since query k-mers can also be sampled. However, no direct comparison of fixed and minimizer sampling has been performed to verify these assumptions. We systematically compare fixed and minimizer sampling using the human genome as our database. We use the resulting k-mer indexes for fixed sampling and minimizer sampling to find all maximal exact matches between our database, the human genome, and three separate query sets, the mouse genome, the chimp genome, and an NGS data set. We reach the following conclusions. First, using larger k-mers reduces query time for both fixed sampling and minimizer sampling at a cost of requiring more space. If we use the same k-mer size for both methods, fixed sampling requires typically half as much space whereas minimizer sampling processes queries only slightly faster. If we are allowed to use any k-mer size for each method, then we can choose a k-mer size such that fixed sampling both uses less space and processes queries faster than minimizer sampling. The reason is that although minimizer sampling is able to sample query k-mers, the number of shared k-mer occurrences that must be processed is much larger for minimizer sampling than fixed sampling. In conclusion, we argue that for any application where each shared k-mer occurrence must be processed, fixed sampling is the right sampling method.

  10. Comparing fixed sampling with minimizer sampling when using k-mer indexes to find maximal exact matches

    Science.gov (United States)

    Torng, Eric

    2018-01-01

    Bioinformatics applications and pipelines increasingly use k-mer indexes to search for similar sequences. The major problem with k-mer indexes is that they require lots of memory. Sampling is often used to reduce index size and query time. Most applications use one of two major types of sampling: fixed sampling and minimizer sampling. It is well known that fixed sampling will produce a smaller index, typically by roughly a factor of two, whereas it is generally assumed that minimizer sampling will produce faster query times since query k-mers can also be sampled. However, no direct comparison of fixed and minimizer sampling has been performed to verify these assumptions. We systematically compare fixed and minimizer sampling using the human genome as our database. We use the resulting k-mer indexes for fixed sampling and minimizer sampling to find all maximal exact matches between our database, the human genome, and three separate query sets, the mouse genome, the chimp genome, and an NGS data set. We reach the following conclusions. First, using larger k-mers reduces query time for both fixed sampling and minimizer sampling at a cost of requiring more space. If we use the same k-mer size for both methods, fixed sampling requires typically half as much space whereas minimizer sampling processes queries only slightly faster. If we are allowed to use any k-mer size for each method, then we can choose a k-mer size such that fixed sampling both uses less space and processes queries faster than minimizer sampling. The reason is that although minimizer sampling is able to sample query k-mers, the number of shared k-mer occurrences that must be processed is much larger for minimizer sampling than fixed sampling. In conclusion, we argue that for any application where each shared k-mer occurrence must be processed, fixed sampling is the right sampling method. PMID:29389989

  11. Project M: Scale Model of Lunar Landing Site of Apollo 17

    Science.gov (United States)

    O'Brien, Hollie; Crain, Timothy P.

    2010-01-01

    The basis of the project was creating a scale model representation of the Apollo 17 lunar landing site. Vital components included surface slope characteristics, crater sizes and locations, prominent rocks, and lighting conditions. The model was made for Project M support when evaluating approach and terminal descent as well as when planning surface operations with respect to the terrain. The project had five main mi lestones during the length of the project. The first was examining the best method to use to re-create the Apollo 17 landing site and then reviewing research fmdings with Dr. Tim Crain and EO staff which occurred on June 25, 2010 at a meeting. The second step was formulating a construction plan, budget, and schedule and then presenting the plan for authority to proceed which occurred on July 6,2010. The third part was building a prototype to test materials and building processes which were completed by July 13, 2010. Next was assembling the landing site model and presenting a mid-term construction status report on July 29, 2010. The fifth and final milestone was demonstrating the model and presenting an exit pitch which happened on August 4, 2010. The project was very technical: it needed a lot of research about moon topography, lighting conditions and angles of the sun on the moon, Apollo 17, and Autonomous Landing and Hazard Avoidance Technology (ALHAT), before starting the actual building process. This required using Spreadsheets, searching internet sources and conducting personal meetings with project representatives. This information assisted the interns in deciding the scale of the model with respect to cracks, craters and rocks and their relative sizes as the objects mentioned could interfere with any of the Lunar Landers: Apollo, Project M and future Landers. The project concluded with the completion of a three dimensional scale model of the Apollo 17 Lunar landing site. This model assists Project M members because they can now visualize

  12. Potential Role of Land Use and Land Cover Information in Powerplant Siting: Example of Three Mile Island

    Science.gov (United States)

    Wray, J. R.

    1982-01-01

    Selecting a site for a nuclear powerplant can be helped by digitizing land use and land cover data, population data, and other pertinent data sets, and then placing them in a geographic information system. Such a system begins with a set of standardized maps for location reference and then provides for retrieval and analysis of spatial data keyed to the maps. This makes possible thematic mapping by computer, or interactive visual display for decisionmaking. It also permits correlating land use area measurements with census and other data (such as fallout dosages), and the updating of all data sets. The system is thus a tool for dealing with resource management problems and for analyzing the interaction between people and their environment. An explanation of a computer-plotted map of land use and cover for Three Mile Island and vicinity is given.

  13. Intégration régionale et politique des outre-mers

    Directory of Open Access Journals (Sweden)

    Didier Benjamin

    1999-06-01

    Full Text Available Grâce à ses outre-mers, qui lui apportent 96% de sa zone économique exclusive, la France dispose du troisième domaine maritime du monde et assure une présence sur tous les océans. Cependant, les outre-mers ne jouent plus qu'un rôle mineur dans la politique des océans. Ce paradoxe s'explique en partie par les difficultés qu'ils rencontrent à s'insérer dans les échanges internationaux et à s'intégrer aux organisations régionales. Les différences de niveaux de développement socioéconomique avec les pays voisins contribuent à isoler les outre-mers dans leur environnement immédiat.

  14. BigFoot Land Cover Surfaces for North and South American Sites, 2000-2003

    Data.gov (United States)

    National Aeronautics and Space Administration — The BigFoot project gathered data for nine EOS Land Validation Sites located from Alaska to Brazil from 2000 to 2003. Each site is representative of one or two...

  15. Kmerind: A Flexible Parallel Library for K-mer Indexing of Biological Sequences on Distributed Memory Systems.

    Science.gov (United States)

    Pan, Tony; Flick, Patrick; Jain, Chirag; Liu, Yongchao; Aluru, Srinivas

    2017-10-09

    Counting and indexing fixed length substrings, or k-mers, in biological sequences is a key step in many bioinformatics tasks including genome alignment and mapping, genome assembly, and error correction. While advances in next generation sequencing technologies have dramatically reduced the cost and improved latency and throughput, few bioinformatics tools can efficiently process the datasets at the current generation rate of 1.8 terabases every 3 days. We present Kmerind, a high performance parallel k-mer indexing library for distributed memory environments. The Kmerind library provides a set of simple and consistent APIs with sequential semantics and parallel implementations that are designed to be flexible and extensible. Kmerind's k-mer counter performs similarly or better than the best existing k-mer counting tools even on shared memory systems. In a distributed memory environment, Kmerind counts k-mers in a 120 GB sequence read dataset in less than 13 seconds on 1024 Xeon CPU cores, and fully indexes their positions in approximately 17 seconds. Querying for 1% of the k-mers in these indices can be completed in 0.23 seconds and 28 seconds, respectively. Kmerind is the first k-mer indexing library for distributed memory environments, and the first extensible library for general k-mer indexing and counting. Kmerind is available at https://github.com/ParBLiSS/kmerind.

  16. MERS-CoV Accessory ORFs Play Key Role for Infection and Pathogenesis

    Energy Technology Data Exchange (ETDEWEB)

    Menachery, Vineet D.; Mitchell, Hugh D.; Cockrell, Adam S.; Gralinski, Lisa E.; Yount, Boyd L.; Graham, Rachel L.; McAnarney, Eileen T.; Douglas, Madeline G.; Scobey, Trevor; Beall, Anne; Dinnon, Kenneth; Kocher, Jacob F.; Hale, Andrew E.; Stratton, Kelly G.; Waters, Katrina M.; Baric, Ralph S.; Racaniello, Vincent R.

    2017-08-22

    ABSTRACT

    While dispensable for viral replication, coronavirus (CoV) accessory open reading frame (ORF) proteins often play critical roles during infection and pathogenesis. Utilizing a previously generated mutant, we demonstrate that the absence of all four Middle East respiratory syndrome CoV (MERS-CoV) accessory ORFs (deletion of ORF3, -4a, -4b, and -5 [dORF3-5]) has major implications for viral replication and pathogenesis. Importantly, attenuation of the dORF3-5 mutant is primarily driven by dysregulated host responses, including disrupted cell processes, augmented interferon (IFN) pathway activation, and robust inflammation.In vitroreplication attenuation also extends toin vivomodels, allowing use of dORF3-5 as a live attenuated vaccine platform. Finally, examination of ORF5 implicates a partial role in modulation of NF-κB-mediated inflammation. Together, the results demonstrate the importance of MERS-CoV accessory ORFs for pathogenesis and highlight them as potential targets for surveillance and therapeutic treatments moving forward.

    IMPORTANCEThe initial emergence and periodic outbreaks of MERS-CoV highlight a continuing threat posed by zoonotic pathogens to global public health. In these studies, mutant virus generation demonstrates the necessity of accessory ORFs in regard to MERS-CoV infection and pathogenesis. With this in mind, accessory ORF functions can be targeted for both therapeutic and vaccine treatments in response to MERS-CoV and related group 2C coronaviruses. In addition, disruption of accessory ORFs in parallel may offer a rapid response platform to attenuation of future emergent strains based on both SARS- and MERS-CoV accessory ORF mutants.

  17. Using linear integer programming for multi-site land-use allocation

    NARCIS (Netherlands)

    Aerts, J.C.J.H.; Eisinger, E.; Heuvelink, G.B.M.; Stewart, Th.J.

    2003-01-01

    Research in the area of spatial decision support (SDS) and resource allocation has recently generated increased attention for integrating optimization techniques with GIS. In this paper we address the use of spatial optimization techniques for solving multi-site land-use allocation (MLUA) problems,

  18. Thermophysical Properties of the Phoenix Mars Landing Site Study Regions

    Science.gov (United States)

    Putzig, N. E.; Mellon, M. T.; Golombek, M. P.; Arvidson, R. E.

    2006-03-01

    Analysis of Phoenix Mars study regions places 4 of 5 in a previously-identified duricrust-dominated thermophysical unit which also contains the Viking and Spirit landing sites. Extrapolation of lander-observed properties to the study regions may be complicated by surface heterogeneity.

  19. Comparison between SARS CoV and MERS CoV Using Apriori Algorithm, Decision Tree, SVM

    Directory of Open Access Journals (Sweden)

    Jang Seongpil

    2016-01-01

    Full Text Available MERS (Middle East Respiratory Syndrome is a worldwide disease these days. The number of infected people is 1038(08/03/2015 in Saudi Arabia and 186(08/03/2015 in South Korea. MERS is all over the world including Europe and the fatality rate is 38.8%, East Asia and the Middle East. The MERS is also known as a cousin of SARS (Severe Acute Respiratory Syndrome because both diseases show similar symptoms such as high fever and difficulty in breathing. This is why we compared MERS with SARS. We used data of the spike glycoprotein from NCBI. As a way of analyzing the protein, apriori algorithm, decision tree, SVM were used, and particularly SVM was iterated by normal, polynomial, and sigmoid. The result came out that the MERS and the SARS are alike but also different in some way.

  20. Image Analysis for Facility Siting: a Comparison of Lowand High-altitude Image Interpretability for Land Use/land Cover Mapping

    Science.gov (United States)

    Borella, H. M.; Estes, J. E.; Ezra, C. E.; Scepan, J.; Tinney, L. R.

    1982-01-01

    For two test sites in Pennsylvania the interpretability of commercially acquired low-altitude and existing high-altitude aerial photography are documented in terms of time, costs, and accuracy for Anderson Level II land use/land cover mapping. Information extracted from the imagery is to be used in the evaluation process for siting energy facilities. Land use/land cover maps were drawn at 1:24,000 scale using commercially flown color infrared photography obtained from the United States Geological Surveys' EROS Data Center. Detailed accuracy assessment of the maps generated by manual image analysis was accomplished employing a stratified unaligned adequate class representation. Both 'area-weighted' and 'by-class' accuracies were documented and field-verified. A discrepancy map was also drawn to illustrate differences in classifications between the two map scales. Results show that the 1:24,000 scale map set was more accurate (99% to 94% area-weighted) than the 1:62,500 scale set, especially when sampled by class (96% to 66%). The 1:24,000 scale maps were also more time-consuming and costly to produce, due mainly to higher image acquisition costs.

  1. Simrank: Rapid and sensitive general-purpose k-mer search tool

    Energy Technology Data Exchange (ETDEWEB)

    DeSantis, T.Z.; Keller, K.; Karaoz, U.; Alekseyenko, A.V; Singh, N.N.S.; Brodie, E.L; Pei, Z.; Andersen, G.L; Larsen, N.

    2011-04-01

    Terabyte-scale collections of string-encoded data are expected from consortia efforts such as the Human Microbiome Project (http://nihroadmap.nih.gov/hmp). Intra- and inter-project data similarity searches are enabled by rapid k-mer matching strategies. Software applications for sequence database partitioning, guide tree estimation, molecular classification and alignment acceleration have benefited from embedded k-mer searches as sub-routines. However, a rapid, general-purpose, open-source, flexible, stand-alone k-mer tool has not been available. Here we present a stand-alone utility, Simrank, which allows users to rapidly identify database strings the most similar to query strings. Performance testing of Simrank and related tools against DNA, RNA, protein and human-languages found Simrank 10X to 928X faster depending on the dataset. Simrank provides molecular ecologists with a high-throughput, open source choice for comparing large sequence sets to find similarity.

  2. 77 FR 55860 - Tribal Listening Sessions on Sacred Sites on Federal Lands

    Science.gov (United States)

    2012-09-11

    ... DEPARTMENT OF THE INTERIOR Bureau of Indian Affairs Tribal Listening Sessions on Sacred Sites on... conduct a listening session with Indian tribes to obtain oral and written comments concerning sacred sites located on Federal lands. This session in Tulsa, Oklahoma, is the sixth in a series of listening sessions...

  3. Ole Rømer-Observatoriet

    DEFF Research Database (Denmark)

    Buhl, Hans; Knudsen, Ole J.; Nielsen, Axel V.

    Siden 1911 har der ligget et astronomisk observatorium i Århus. Ole Rømer-Observatoriet blev efter en turbulent start drevet af kommunen, indtil Aarhus Universitet i 1956 overtog det. Der har fra tid til anden været både kontroverser og trusler om lukning, men arbejdet på observatoriet har også...... fortæller museumsinspektør Hans Buhl og planetarieleder Ole J. Knudsen, begge Steno Museet, de næste 95 år af observatoriets brogede historie....

  4. Nordic Winter and Cold: Their Correspondence with Tomas Tranströmer's Poetry

    Science.gov (United States)

    Hosian, Mohammad Akbar

    2015-01-01

    The Nobel Prize winning poet Tomas Tranströmer was born and bred in Sweden, a remarkably Scandinavian country. Topographically, Scandinavian countries are locations of extreme cold and snowing. This distinguishing climatic condition has had a dominant influence and impact on almost all Scandinavian art and literature, including Tomas Tranströmer's…

  5. Multiple comparative metagenomics using multiset k-mer counting

    Directory of Open Access Journals (Sweden)

    Gaëtan Benoit

    2016-11-01

    Full Text Available Background Large scale metagenomic projects aim to extract biodiversity knowledge between different environmental conditions. Current methods for comparing microbial communities face important limitations. Those based on taxonomical or functional assignation rely on a small subset of the sequences that can be associated to known organisms. On the other hand, de novo methods, that compare the whole sets of sequences, either do not scale up on ambitious metagenomic projects or do not provide precise and exhaustive results. Methods These limitations motivated the development of a new de novo metagenomic comparative method, called Simka. This method computes a large collection of standard ecological distances by replacing species counts by k-mer counts. Simka scales-up today’s metagenomic projects thanks to a new parallel k-mer counting strategy on multiple datasets. Results Experiments on public Human Microbiome Project datasets demonstrate that Simka captures the essential underlying biological structure. Simka was able to compute in a few hours both qualitative and quantitative ecological distances on hundreds of metagenomic samples (690 samples, 32 billions of reads. We also demonstrate that analyzing metagenomes at the k-mer level is highly correlated with extremely precise de novo comparison techniques which rely on all-versus-all sequences alignment strategy or which are based on taxonomic profiling.

  6. 28-mer Fragment Derived from Enterocin CRL35 Displays an Unexpected Bactericidal Effect on Listeria Cells.

    Science.gov (United States)

    Masias, Emilse; Sanches, Paulo R S; Dupuy, Fernando G; Acuna, Leonardo; Bellomio, Augusto; Cilli, Eduardo; Saavedra, Lucila; Minahk, Carlos

    2015-01-01

    Two shorter peptides derived from enterocin CRL35, a 43-mer bacteriocin, were synthesized i.e. the N-terminal fragment spanning from residues 1 to 15, and a 28-mer fragment that represents the C-terminal of enterocin CRL35, the residues 16 to 43. The separate peptides showed no activity when combined. On one hand, the 28-mer peptide displayed an unpredicted antimicrobial activity. On the other, 15- mer peptide had no consistent anti-Listeria effect. The dissociation constants calculated from experimental data indicated that all peptides could bind at similar extent to the sensitive cells. However, transmembrane electrical potential was not dissipated to the same level by the different peptides; whereas the full-length and the C-terminal 28-mer fragment induced almost full dissipation, 15-mer fragment produced only a slow and incomplete effect. Furthermore, a different interaction of each peptide with membranes was demonstrated based on studies carried out with liposomes, which led us to conclude that activity was related to structure rather than to net positive charges. These results open up the possibility of designing new peptides based on the 28-mer fragment with enhanced activity, which would represent a promising approach for combating Listeria and other pathogens.

  7. Mer tyrosine kinase promotes the survival of t(1;19)-positive acute lymphoblastic leukemia (ALL) in the central nervous system (CNS).

    Science.gov (United States)

    Krause, Sarah; Pfeiffer, Christian; Strube, Susanne; Alsadeq, Ameera; Fedders, Henning; Vokuhl, Christian; Loges, Sonja; Waizenegger, Jonas; Ben-Batalla, Isabel; Cario, Gunnar; Möricke, Anja; Stanulla, Martin; Schrappe, Martin; Schewe, Denis M

    2015-01-29

    Patients with t(1;19)-positive acute lymphoblastic leukemia (ALL) are prone to central nervous system (CNS) relapses, and expression of the TAM (Tyro3, Axl, and Mer) receptor Mer is upregulated in these leukemias. We examined the functional role of Mer in the CNS in preclinical models and performed correlative studies in 64 t(1;19)-positive and 93 control pediatric ALL patients. ALL cells were analyzed in coculture with human glioma cells and normal rat astrocytes: CNS coculture caused quiescence and protection from methotrexate toxicity in Mer(high) ALL cell lines, which was antagonized by short hairpin RNA-mediated knockdown of Mer. Mer expression was upregulated, prosurvival Akt and mitogen-activated protein kinase signaling were activated, and secretion of the Mer ligand Galectin-3 was stimulated. Mer(high) t(1;19) primary cells caused CNS involvement to a larger extent in murine xenografts than in their Mer(low) counterparts. Leukemic cells from Mer(high) xenografts showed enhanced survival in coculture. Treatment of Mer(high) patient cells with the Mer-specific inhibitor UNC-569 in vivo delayed leukemia onset, reduced CNS infiltration, and prolonged survival of mice. Finally, a correlation between high Mer expression and CNS positivity upon initial diagnosis was observed in t(1;19) patients. Our data provide evidence that Mer is associated with survival in the CNS in t(1;19)-positive ALL, suggesting a role as a diagnostic marker and therapeutic target. © 2015 by The American Society of Hematology.

  8. Alignment independent 3D-QSAR, quantum calculations and molecular docking of Mer specific tyrosine kinase inhibitors as anticancer drugs

    Directory of Open Access Journals (Sweden)

    Fereshteh Shiri

    2016-03-01

    Full Text Available Mer receptor tyrosine kinase is a promising novel cancer therapeutic target in many human cancers, because abnormal activation of Mer has been implicated in survival signaling and chemoresistance. 3D-QSAR analyses based on alignment independent descriptors were performed on a series of 81 Mer specific tyrosine kinase inhibitors. The fractional factorial design (FFD and the enhanced replacement method (ERM were applied and tested as variable selection algorithms for the selection of optimal subsets of molecular descriptors from a much greater pool of such regression variables. The data set was split into 65 molecules as the training set and 16 compounds as the test set. All descriptors were generated by using the GRid INdependent descriptors (GRIND approach. After variable selection, GRIND were correlated with activity values (pIC50 by PLS regression. Of the two applied variable selection methods, ERM had a noticeable improvement on the statistical parameters of PLS model, and yielded a q2 value of 0.77, an rpred2 of 0.94, and a low RMSEP value of 0.25. The GRIND information contents influencing the affinity on Mer specific tyrosine kinase were also confirmed by docking studies. In a quantum calculation study, the energy difference between HOMO and LUMO (gap implied the high interaction of the most active molecule in the active site of the protein. In addition, the molecular electrostatic potential energy at DFT level confirmed results obtained from the molecular docking. The identified key features obtained from the molecular modeling, enabled us to design novel kinase inhibitors.

  9. Alignment independent 3D-QSAR, quantum calculations and molecular docking of Mer specific tyrosine kinase inhibitors as anticancer drugs.

    Science.gov (United States)

    Shiri, Fereshteh; Pirhadi, Somayeh; Ghasemi, Jahan B

    2016-03-01

    Mer receptor tyrosine kinase is a promising novel cancer therapeutic target in many human cancers, because abnormal activation of Mer has been implicated in survival signaling and chemoresistance. 3D-QSAR analyses based on alignment independent descriptors were performed on a series of 81 Mer specific tyrosine kinase inhibitors. The fractional factorial design (FFD) and the enhanced replacement method (ERM) were applied and tested as variable selection algorithms for the selection of optimal subsets of molecular descriptors from a much greater pool of such regression variables. The data set was split into 65 molecules as the training set and 16 compounds as the test set. All descriptors were generated by using the GRid INdependent descriptors (GRIND) approach. After variable selection, GRIND were correlated with activity values (pIC50) by PLS regression. Of the two applied variable selection methods, ERM had a noticeable improvement on the statistical parameters of PLS model, and yielded a q (2) value of 0.77, an [Formula: see text] of 0.94, and a low RMSEP value of 0.25. The GRIND information contents influencing the affinity on Mer specific tyrosine kinase were also confirmed by docking studies. In a quantum calculation study, the energy difference between HOMO and LUMO (gap) implied the high interaction of the most active molecule in the active site of the protein. In addition, the molecular electrostatic potential energy at DFT level confirmed results obtained from the molecular docking. The identified key features obtained from the molecular modeling, enabled us to design novel kinase inhibitors.

  10. Basin Contributions to the Stratigraphy of the Apollo 16 Landing Site

    Science.gov (United States)

    Haskin, Larry A.

    2001-01-01

    Ejecta deposit modeling suggests that the megaregolith at the Apollo 16 landing site is dominated by Imbrium and Serenitatis ejecta, and Nectaris ejecta are a minor componen Additional information is contained in the original extended abstract.t.

  11. Mercuric ion reduction and resistance in transgenic Arabidopsis thaliana plants expressing a modified bacterial merA gene.

    Science.gov (United States)

    Rugh, C L; Wilde, H D; Stack, N M; Thompson, D M; Summers, A O; Meagher, R B

    1996-01-01

    With global heavy metal contamination increasing, plants that can process heavy metals might provide efficient and ecologically sound approaches to sequestration and removal. Mercuric ion reductase, MerA, converts toxic Hg2+ to the less toxic, relatively inert metallic mercury (Hg0) The bacterial merA sequence is rich in CpG dinucleotides and has a highly skewed codon usage, both of which are particularly unfavorable to efficient expression in plants. We constructed a mutagenized merA sequence, merApe9, modifying the flanking region and 9% of the coding region and placing this sequence under control of plant regulatory elements. Transgenic Arabidopsis thaliana seeds expressing merApe9 germinated, and these seedlings grew, flowered, and set seed on medium containing HgCl2 concentrations of 25-100 microM (5-20 ppm), levels toxic to several controls. Transgenic merApe9 seedlings evolved considerable amounts of Hg0 relative to control plants. The rate of mercury evolution and the level of resistance were proportional to the steady-state mRNA level, confirming that resistance was due to expression of the MerApe9 enzyme. Plants and bacteria expressing merApe9 were also resistant to toxic levels of Au3+. These and other data suggest that there are potentially viable molecular genetic approaches to the phytoremediation of metal ion pollution. Images Fig. 2 Fig. 3 Fig. 4 PMID:8622910

  12. The effect of multiple external representations (MERs) worksheets toward complex system reasoning achievement

    Science.gov (United States)

    Sumarno; Ibrahim, M.; Supardi, Z. A. I.

    2018-03-01

    The application of a systems approach to assessing biological systems provides hope for a coherent understanding of cell dynamics patterns and their relationship to plant life. This action required the reasoning about complex systems. In other sides, there were a lot of researchers who provided the proof about the instructional successions. They involved the multiple external representations which improved the biological learning. The researcher conducted an investigation using one shoot case study design which involved 30 students in proving that the MERs worksheets could affect the student's achievement of reasoning about complex system. The data had been collected based on test of reasoning about complex system and student's identification result who worked through MERs. The result showed that only partially students could achieve reasoning about system complex, but their MERs skill could support their reasoning ability of complex system. This study could bring a new hope to develop the MERs worksheet as a tool to facilitate the reasoning about complex system.

  13. Feasibility of Using Convalescent Plasma Immunotherapy for MERS-CoV Infection, Saudi Arabia

    Science.gov (United States)

    Hajeer, Ali H.; Luke, Thomas; Raviprakash, Kanakatte; Balkhy, Hanan; Johani, Sameera; Al-Dawood, Abdulaziz; Al-Qahtani, Saad; Al-Omari, Awad; Al-Hameed, Fahad; Hayden, Frederick G.; Fowler, Robert; Bouchama, Abderrezak; Shindo, Nahoko; Al-Khairy, Khalid; Carson, Gail; Taha, Yusri; Sadat, Musharaf; Alahmadi, Mashail

    2016-01-01

    We explored the feasibility of collecting convalescent plasma for passive immunotherapy of Middle East respiratory syndrome coronavirus (MERS-CoV) infection by using ELISA to screen serum samples from 443 potential plasma donors: 196 patients with suspected or laboratory-confirmed MERS-CoV infection, 230 healthcare workers, and 17 household contacts exposed to MERS-CoV. ELISA-reactive samples were further tested by indirect fluorescent antibody and microneutralization assays. Of the 443 tested samples, 12 (2.7%) had a reactive ELISA result, and 9 of the 12 had reactive indirect fluorescent antibody and microneutralization assay titers. Undertaking clinical trials of convalescent plasma for passive immunotherapy of MERS-CoV infection may be feasible, but such trials would be challenging because of the small pool of potential donors with sufficiently high antibody titers. Alternative strategies to identify convalescent plasma donors with adequate antibody titers should be explored, including the sampling of serum from patients with more severe disease and sampling at earlier points during illness. PMID:27532807

  14. Transmission of MERS-coronavirus in household contacts

    NARCIS (Netherlands)

    Drosten, Christian; Meyer, Benjamin; Müller, Marcel A; Corman, Victor M; Al-Masri, Malak; Hossain, Raheela; Madani, Hosam; Sieberg, Andrea; Bosch, Berend Jan|info:eu-repo/dai/nl/273306049; Lattwein, Erik; Alhakeem, Raafat F; Assiri, Abdullah M; Hajomar, Waleed; Albarrak, Ali M; Al-Tawfiq, Jaffar A; Zumla, Alimuddin I; Memish, Ziad A

    2014-01-01

    BACKGROUND: Strategies to contain the Middle East respiratory syndrome coronavirus (MERS-CoV) depend on knowledge of the rate of human-to-human transmission, including subclinical infections. A lack of serologic tools has hindered targeted studies of transmission. METHODS: We studied 26 index

  15. Nucleation and Growth Kinetics from LaMer Burst Data.

    Science.gov (United States)

    Chu, Daniel B K; Owen, Jonathan S; Peters, Baron

    2017-10-12

    In LaMer burst nucleation, the individual nucleation events happen en masse, quasi-simultaneously, and at nearly identical homogeneous conditions. These properties make LaMer burst nucleation important for applications that require monodispersed particles and also for theoretical analyses. Sugimoto and co-workers predicted that the number of nuclei generated during a LaMer burst depends only on the solute supply rate and the growth rate, independent of the nucleation kinetics. Some experiments confirm that solute supply kinetics control the number of nuclei, but flaws in the original theoretical analysis raise questions about the predicted roles of growth and nucleation kinetics. We provide a rigorous analysis of the coupled equations that govern concentrations of nuclei and solutes. Our analysis confirms that the number of nuclei is largely determined by the solute supply and growth rates, but our predicted relationship differs from that of Sugimoto et al. Moreover, we find that additional nucleus size dependent corrections should emerge in systems with slow growth kinetics. Finally, we show how the nucleation kinetics determine the particle size distribution. We suggest that measured particle size distributions might therefore provide ways to test theoretical models of homogeneous nucleation kinetics.

  16. The impact of multichannel microelectrode recording (MER) in deep brain stimulation of the basal ganglia.

    Science.gov (United States)

    Kinfe, Thomas M; Vesper, Jan

    2013-01-01

    Deep brain stimulation (DBS) of the basal ganglia (Ncl. subthalamicus, Ncl. ventralis intermedius thalami, globus pallidus internus) has become an evidence-based and well-established treatment option in otherwise refractory movement disorders. The Ncl. subthalamicus (STN) is the target of choice in Parkinson's disease.However, a considerable discussion is currently ongoing with regard to the necessity for micro-electrode recording (MER) in DBS surgery.The present review provides an overview on deep brain stimulation and (MER) of the STN in patients with Parkinson's disease. Detailed description is given concerning the multichannel MER systems nowadays available for DBS of the basal ganglia, especially of the STN, as a useful tool for target refinement. Furthermore, an overview is given of the historical aspects, spatial mapping of the STN by MER, and its impact for accuracy and precision in current functional stereotactic neurosurgery.The pros concerning target refinement by MER means on the one hand, and cons including increased bleeding risk, increased operation time, local or general anesthesia, and single versus multichannel microelectrode recording are discussed in detail. Finally, the authors favor the use of MER with intraoperative testing combined with imaging to achieve a more precise electrode placement, aiming to ameliorate clinical outcome in therapy-resistant movement disorders.

  17. Image analysis for facility siting: a comparison of low- and high-altitude image interpretability for land use/land cover mapping

    International Nuclear Information System (INIS)

    Borella, H.M.; Estes, J.E.; Ezra, C.E.; Scepan, J.; Tinney, L.R.

    1982-01-01

    For two test sites in Pennsylvania the interpretability of commercially acquired low-altitude and existing high-altitude aerial photography are documented in terms of time, costs, and accuracy for Anderson Level II land use/land cover mapping. Information extracted from the imagery is to be used in the evaluation process for siting energy facilities. Land use/land cover maps were drawn at 1:24,000 scale using commercially flown color infrared photography obtained from the United States Geological Surveys' EROS Data Center. Detailed accuracy assessment of the maps generated by manual image analysis was accomplished employing a stratified unaligned adequate class representation. Both are-weighted and by-class accuracies were documented and field-verified. A discrepancy map was also drawn to illustrate differences in classifications between the two map scales. Results show that the 1:24,000 scale map set was accurate (99% to 94% area-weighted) than the 1:62,500 scale set, especially when sampled by class (96% to 66%). The 1:24,000 scale maps were also more time-consuming and costly to produce, due mainly to higher image acquisition costs

  18. The archeological sites on lands: actual problems of the legislation and case study

    Directory of Open Access Journals (Sweden)

    А. Б. Наконечний

    2014-12-01

    Full Text Available The article is dedicated to the analysis of the archeological sites on lands. There was examined their legal status, places of the main categories among the land plots in Ukraine. It is proposed the decision of the main legislative problems and the elimination of shortcomings in the proceedings of relevant categories of cases.

  19. Dromedary camels and the transmission of Middle East Respiratory Syndrome Coronavirus (MERS-CoV)

    Science.gov (United States)

    Hemida, Maged G; Elmoslemany, Ahmed; Al-Hizab, Fahad; Alnaeem, Abdulmohsen; Almathen, Faisal; Faye, Bernard; Chu, Daniel KW; Perera, Ranawaka A; Peiris, Malik

    2015-01-01

    Middle East respiratory syndrome coronavirus (MERS-CoV) is an existential threat to global public health. The virus has been repeatedly detected in dromedary camels (Camelus dromedarius). Adult animals in many countries in the Middle East as well as in North and East Africa showed high (>90%) sero-prevalence to the virus. MERS-CoV isolated from dromedaries is genetically and phenotypically similar to viruses from humans. We summarise current understanding of the ecology of MERS-CoV in animals and transmission at the animal-human interface. We review aspects of husbandry, animal movements and trade and the use and consumption of camel dairy and meat products in the Middle East that may be relevant to the epidemiology of MERS. We also highlight the gaps in understanding the transmission of this virus in animals and from animals to humans. PMID:26256102

  20. Percolation of polyatomic species on site diluted lattices

    International Nuclear Information System (INIS)

    Cornette, V.; Ramirez-Pastor, A.J.; Nieto, F.

    2006-01-01

    In this Letter, the percolation of (a) linear segments of size k and (b) k-mers (particles occupying k adjacent sites) of different structures and forms deposited on a diluted square lattice have been studied. The diluted lattice is built by randomly selecting a fraction of sites which are considered forbidden for deposition. The analysis of the obtained results is made in the framework of the finite size scaling theory. The characteristic parameters of the percolation problem are dependent not only on the form and structure of the k-mers but also on the properties of the lattice where they are deposited. A phase diagram separating a percolating from a non-percolating region is determined and discussed

  1. Cell-based land use screening procedure for regional siting analysis

    International Nuclear Information System (INIS)

    Jalbert, J.S.; Dobson, J.E.

    1976-01-01

    An energy facility site-screening methodology which permits the land resource planner to identify candidate siting areas was developed. Through the use of spatial analysis procedures and computer graphics, a selection of candidate areas is obtained. Specific sites then may be selected from among candidate areas for environmental impact analysis. The computerized methodology utilizes a cell-based geographic information system for specifying the suitability of candidate areas for an energy facility. The criteria to be considered may be specified by the user and weighted in terms of importance. Three primary computer programs have been developed. These programs produce thematic maps, proximity calculations, and suitability calculations. Programs are written so as to be transferrable to regional planning or regulatory agencies to assist in rational and comprehensive power plant site identification and analysis

  2. A Novel Dynamic Model Describing the Spread of the MERS-CoV and the Expression of Dipeptidyl Peptidase 4

    Directory of Open Access Journals (Sweden)

    Siming Tang

    2017-01-01

    Full Text Available The Middle East respiratory syndrome (MERS coronavirus, a newly identified pathogen, causes severe pneumonia in humans. MERS is caused by a coronavirus known as MERS-CoV, which attacks the respiratory system. The recently defined receptor for MERS-CoV, dipeptidyl peptidase 4 (DPP4, is generally expressed in endothelial and epithelial cells and has been shown to be present on cultured human nonciliated bronchiolar epithelium cells. In this paper, a class of novel four-dimensional dynamic model describing the infection of MERS-CoV is given, and then global stability of the equilibria of the model is discussed. Our results show that the spread of MERS-CoV can also be controlled by decreasing the expression rate of DPP4.

  3. A Computational Approach for Predicting Role of Human MicroRNAs in MERS-CoV Genome

    Directory of Open Access Journals (Sweden)

    Md Mahmudul Hasan

    2014-01-01

    Full Text Available The new epidemic Middle East Respiratory Syndrome (MERS is caused by a type of human coronavirus called MERS-CoV which has global fatality rate of about 30%. We are investigating potential antiviral therapeutics against MERS-CoV by using host microRNAs (miRNAs which may downregulate viral gene expression to quell viral replication. We computationally predicted potential 13 cellular miRNAs from 11 potential hairpin sequences of MERS-CoV genome. Our study provided an interesting hypothesis that those miRNAs, that is, hsa-miR-628-5p, hsa-miR-6804-3p, hsa-miR-4289, hsa-miR-208a-3p, hsa-miR-510-3p, hsa-miR-18a-3p, hsa-miR-329-3p, hsa-miR-548ax, hsa-miR-3934-5p, hsa-miR-4474-5p, hsa-miR-7974, hsa-miR-6865-5p, and hsa-miR-342-3p, would be antiviral therapeutics against MERS-CoV infection.

  4. Histopathology of Middle East respiratory syndrome coronovirus (MERS-CoV) infection - clinicopathological and ultrastructural study.

    Science.gov (United States)

    Alsaad, Khaled O; Hajeer, Ali H; Al Balwi, Mohammed; Al Moaiqel, Mohammed; Al Oudah, Nourah; Al Ajlan, Abdulaziz; AlJohani, Sameera; Alsolamy, Sami; Gmati, Giamal E; Balkhy, Hanan; Al-Jahdali, Hamdan H; Baharoon, Salim A; Arabi, Yaseen M

    2018-02-01

    The pathogenesis, viral localization and histopathological features of Middle East respiratory syndrome - coronavirus (MERS-CoV) in humans are not described sufficiently. The aims of this study were to explore and define the spectrum of histological and ultrastructural pathological changes affecting various organs in a patient with MERS-CoV infection and represent a base of MERS-CoV histopathology. We analysed the post-mortem histopathological findings and investigated localisation of viral particles in the pulmonary and extrapulmonary tissue by transmission electron microscopic examination in a 33-year-old male patient of T cell lymphoma, who acquired MERS-CoV infection. Tissue needle biopsies were obtained from brain, heart, lung, liver, kidney and skeletal muscle. All samples were collected within 45 min from death to reduce tissue decomposition and artefact. Histopathological examination showed necrotising pneumonia, pulmonary diffuse alveolar damage, acute kidney injury, portal and lobular hepatitis and myositis with muscle atrophic changes. The brain and heart were histologically unremarkable. Ultrastructurally, viral particles were localised in the pneumocytes, pulmonary macrophages, renal proximal tubular epithelial cells and macrophages infiltrating the skeletal muscles. The results highlight the pulmonary and extrapulmonary pathological changes of MERS-CoV infection and provide the first evidence of the viral presence in human renal tissue, which suggests tissue trophism for MERS-CoV in kidney. © 2017 John Wiley & Sons Ltd.

  5. KOREAN LUNAR LANDER – CONCEPT STUDY FOR LANDING-SITE SELECTION FOR LUNAR RESOURCE EXPLORATION

    Directory of Open Access Journals (Sweden)

    K. J. Kim

    2016-06-01

    Full Text Available As part of the national space promotion plan and presidential national agendas South Korea’s institutes and agencies under the auspices of the Ministry of Science, Information and Communication Technology and Future Planning (MSIP are currently developing a lunar mission package expected to reach Moon in 2020. While the officially approved Korean Pathfinder Lunar Orbiter (KPLO is aimed at demonstrating technologies and monitoring the lunar environment from orbit, a lander – currently in pre-phase A – is being designed to explore the local geology with a particular focus on the detection and characterization of mineral resources. In addition to scientific and potential resource potentials, the selection of the landing-site will be partly constrained by engineering constraints imposed by payload and spacecraft layout. Given today’s accumulated volume and quality of available data returned from the Moon’s surface and from orbital observations, an identification of landing sites of potential interest and assessment of potential hazards can be more readily accomplished by generating synoptic snapshots through data integration. In order to achieve such a view on potential landing sites, higher level processing and derivation of data are required, which integrates their spatial context, with detailed topographic and geologic characterizations. We are currently assessing the possibility of using fuzzy c-means clustering algorithms as a way to perform (semi- automated terrain characterizations of interest. This paper provides information and background on the national lunar lander program, reviews existing approaches – including methods and tools – for landing site analysis and hazard assessment, and discusses concepts to detect and investigate elemental abundances from orbit and the surface. This is achieved by making use of manual, semi-automated as well as fully-automated remote-sensing methods to demonstrate the applicability of

  6. Application of a mer-lux biosensor for estimating bioavailable mercury in soil

    DEFF Research Database (Denmark)

    Rasmussen, Lasse Dam; Sørensen, S. J.; Turner, R. R.

    2000-01-01

    A previously described bioassay using a mer-lux gene fusion for detection of bioavailable mercury was applied for the estimation of the bioavailable fraction of mercury in soil. The bioavailable fraction is defined here as being part of the water leachable fraction. Due to masking of light emission...... responses. The utility of the mer-lux biosensor assay was tested by relating measurements of bioavailable and total mercury to the response of the soil microbial community to mercury exposure. Two different soil types (an agricultural and a beech forest soil) were spiked with 2.5 µg Hg(II) g-1 in microcosms...... in resistance or diversity. This study showed that the bioassay using the mer-lux biosensor is a useful and sensitive tool for estimation of bioavailable mercury in soil....

  7. Co-circulation of three camel coronavirus species and recombination of MERS-CoVs in Saudi Arabia.

    Science.gov (United States)

    Sabir, Jamal S M; Lam, Tommy T-Y; Ahmed, Mohamed M M; Li, Lifeng; Shen, Yongyi; Abo-Aba, Salah E M; Qureshi, Muhammd I; Abu-Zeid, Mohamed; Zhang, Yu; Khiyami, Mohammad A; Alharbi, Njud S; Hajrah, Nahid H; Sabir, Meshaal J; Mutwakil, Mohammed H Z; Kabli, Saleh A; Alsulaimany, Faten A S; Obaid, Abdullah Y; Zhou, Boping; Smith, David K; Holmes, Edward C; Zhu, Huachen; Guan, Yi

    2016-01-01

    Outbreaks of Middle East respiratory syndrome (MERS) raise questions about the prevalence and evolution of the MERS coronavirus (CoV) in its animal reservoir. Our surveillance in Saudi Arabia in 2014 and 2015 showed that viruses of the MERS-CoV species and a human CoV 229E-related lineage co-circulated at high prevalence, with frequent co-infections in the upper respiratory tract of dromedary camels. viruses of the betacoronavirus 1 species, we found that dromedary camels share three CoV species with humans. Several MERS-CoV lineages were present in camels, including a recombinant lineage that has been dominant since December 2014 and that subsequently led to the human outbreaks in 2015. Camels therefore serve as an important reservoir for the maintenance and diversification of the MERS-CoVs and are the source of human infections with this virus. Copyright © 2016, American Association for the Advancement of Science.

  8. Factors affecting antimicrobial activity of MUC7 12-mer, a human salivary mucin-derived peptide

    Directory of Open Access Journals (Sweden)

    Bobek Libuse A

    2007-11-01

    Full Text Available Abstract Background MUC7 12-mer (RKSYKCLHKRCR, a cationic antimicrobial peptide derived from the human low-molecular-weight salivary mucin MUC7, possesses potent antimicrobial activity in vitro. In order to evaluate the potential therapeutic application of the MUC7 12-mer, we examined the effects of mono- and divalent cations, EDTA, pH, and temperature on its antimicrobial activity. Methods Minimal Inhibitory Concentrations (MICs were determined using a liquid growth inhibition assay in 96-well microtiter plates. MUC7 12-mer was added at concentrations of 1.56–50 μM. MICs were determined at three endpoints: MIC-0, MIC-1, and MIC-2 (the lowest drug concentration showing 10%, 25% and 50% of growth, respectively. To examine the effect of salts or EDTA, a checkerboard microdilution technique was used. Fractional inhibitory concentration index (FICi was calculated on the basis of MIC-0. The viability of microbial cells treated with MUC7 12-mer in the presence of sodium or potassium was also determined by killing assay or flow cytometry. Results The MICs of MUC7 12-mer against organisms tested ranged from 6.25–50 μM. For C. albicans, antagonism (FICi 4.5 was observed for the combination of MUC7 12-mer and calcium; however, there was synergism (FICi 0.22 between MUC7 12-mer and EDTA, and the synergism was retained in the presence of calcium at its physiological concentration (1–2 mM. No antagonism but additivity or indifference (FICi 0.55–2.5 was observed for the combination of MUC7 12-mer and each K+, Na+, Mg2+, or Zn2+. MUC7 12-mer peptide (at 25 μM also exerted killing activity in the presence of NaCl, (up to 25 mM for C. albicans and up to 150 mM for E. coli, a physiological concentration of sodium in the oral cavity and serum, respectively and retained candidacidal activity in the presence of KCl (up to 40 mM. The peptide exhibited higher inhibitory activity against C. albicans at pH 7, 8, and 9 than at pH 5 and 6, and temperature up to

  9. Mer partagée, part maudite. La fabrique rituelle d’un horizon maritime : mer et sacré chez les pêcheurs Imrâgen (Mauritanie

    Directory of Open Access Journals (Sweden)

    Hélène Artaud

    2012-02-01

    Full Text Available La mer a longtemps été perçue pour la société maure comme un monde en marge, étranger et étrange. Seule exception notable : la relation liant les communautés imrâgen à l’espace maritime. Dans la perception imrâgen de la mer se présentent d’emblée comme enchevêtrés les mondes naturels et surnaturels. Les modalités de leur articulation procèdent toutefois de logiques que seuls distinguent et maîtrisent certains initiés, dépositaires du « secret de la mer ». Quelques familles, issues des groupes maraboutiques Bârikalla et Buhubbayni, ont ainsi réussi à asseoir leur légitimité sur la côte par l’exercice de pouvoirs supposés influencer le cours des phénomènes naturels (vents, intensité des courants, cycle de la lune ou le comportement d’espèces marines (dauphins et tortues, dont ils ont fait leurs principaux émissaires. Quelles sont la nature, l’efficacité et les limites de ce pouvoir sur la mer? Comment inscrit-il le marabout au cœur de l’écologie imrâgen, le sacré au principe de l’équilibre naturel ? C’est à ces questionnements que nous nous proposons d’apporter quelques éléments d’analyse.

  10. Improvement of the Russian system of medical care at the site of space crew landing

    Science.gov (United States)

    Rukavishnikov, Ilya; Bogomolov, Valery; Polyakov, Alexey

    The crew members are delivered to ISS and return back to the Earth on the space craft "Soyuz TMA" at present time. The technical means providing the safe landing of space crews are reliable enough. In spite of that the complex of negative factors (long lasting alternating and shock overloads, effects of landing apparatus rotation on vestibular system) affects the crew during landing and can reach the extreme values under the certain conditions. According to this fact there is a possibility of appearance of bodily damages of different weight besides the traditional functional disturbances. The group of search and rescue on the landing site includes the medical specialists appropriately equipped to stop the symptoms of medical contingency (strong vestibule-vegetative reactions, traumas of different weight, etc.) Medical evacuation complex which provides the acceptable conditions for the cosmonauts including the conditions for medical care is delivered to the landing site as well. The long term experience of search and rescue assurance at the landing site have shown that the specialists successfully cope with this task. In some cases it was required to give the medical help which allowed to improve the general condition and physical capacity of crewmembers and provide their evacuation to the places of postflight rehabilitation. At the same time the solution of some of the problems from our point of view could increase the efficacy of medical care for the landing crew. The organization of the training on emergency under the field conditions for medical specialists on the regular basis (not less that once a year) is extremely important. The equipment of medical specialists requires the regular improvement and modernization due to the fast changing medical technologies and standards. Wearable medical sets must provide the first aid performing in accordance to the modern medical requirements. It is also necessary to include in the list of equipment the textbook of

  11. Chromatin accessibility prediction via convolutional long short-term memory networks with k-mer embedding.

    Science.gov (United States)

    Min, Xu; Zeng, Wanwen; Chen, Ning; Chen, Ting; Jiang, Rui

    2017-07-15

    Experimental techniques for measuring chromatin accessibility are expensive and time consuming, appealing for the development of computational approaches to predict open chromatin regions from DNA sequences. Along this direction, existing methods fall into two classes: one based on handcrafted k -mer features and the other based on convolutional neural networks. Although both categories have shown good performance in specific applications thus far, there still lacks a comprehensive framework to integrate useful k -mer co-occurrence information with recent advances in deep learning. We fill this gap by addressing the problem of chromatin accessibility prediction with a convolutional Long Short-Term Memory (LSTM) network with k -mer embedding. We first split DNA sequences into k -mers and pre-train k -mer embedding vectors based on the co-occurrence matrix of k -mers by using an unsupervised representation learning approach. We then construct a supervised deep learning architecture comprised of an embedding layer, three convolutional layers and a Bidirectional LSTM (BLSTM) layer for feature learning and classification. We demonstrate that our method gains high-quality fixed-length features from variable-length sequences and consistently outperforms baseline methods. We show that k -mer embedding can effectively enhance model performance by exploring different embedding strategies. We also prove the efficacy of both the convolution and the BLSTM layers by comparing two variations of the network architecture. We confirm the robustness of our model to hyper-parameters by performing sensitivity analysis. We hope our method can eventually reinforce our understanding of employing deep learning in genomic studies and shed light on research regarding mechanisms of chromatin accessibility. The source code can be downloaded from https://github.com/minxueric/ismb2017_lstm . tingchen@tsinghua.edu.cn or ruijiang@tsinghua.edu.cn. Supplementary materials are available at

  12. Land use suitability screening for power plant sites in Maryland

    International Nuclear Information System (INIS)

    Dobson, J.E.

    1975-01-01

    Since 1974 Oak Ridge National Laboratory (ORNL) has been engaged in developing an automated procedure for land use suitability screening. The Nuclear Regulatory Commission has funded the project to aid in the selection of power plant sites in Maryland. Its purpose is to identify candidate areas from which specific candidate sites can be chosen for detailed analyses. The ORNL approach assures that certain key variables are examined empirically for every cell in the study region before candidate sites are selected. Each variable is assigned an importance weight and compatibility score based upon its effect on the economic, social, or ecologic costs associated with construction in a given cell. The weighted scores for each variable are aggregated and output as a suitability score for each cell

  13. Duean sip, théâtre de l’ethnorégionalisme sud. Les nomades de la mer et le cycle rituel du dixième mois dans la province de Phang Nga (sud de la Thaïlande)

    OpenAIRE

    Ferrari, Olivier

    2013-01-01

    La cérémonie bouddhique du dixième mois lunaire, connue comme la fête des morts et des revenants, revêt dans la région de Phang Nga, au sud de la Thaïlande une importance et un rôle qui vont bien au-delà de sa signification religieuse. Il s’agit en effet d’un complexe rituel qui, en s’emboîtant avec les cérémonies du festival végétarien des Sino-Thaïs et avec d’autres cérémonies propres aux nomades de la mer (Moken, Moklen et Urak Lawoi), met en scène les fondements des relations interethniqu...

  14. Molecular dynamics of Middle East Respiratory Syndrome Coronavirus (MERS CoV) fusion heptad repeat trimers

    KAUST Repository

    Kandeel, Mahmoud; Al-Taher, Abdulla; Li, Huifang; Schwingenschlö gl, Udo; Alnazawi, Mohamed

    2018-01-01

    Structural studies related to Middle East Respiratory Syndrome Coronavirus (MERS CoV) infection process are so limited. In this study, molecular dynamics (MD) simulation was carried out to unravel changes in the MERS CoV heptad repeat domains (HRs

  15. Identifying Monoclonal Antibodies that Potently Inhibit MERS-CoV | Center for Cancer Research

    Science.gov (United States)

    The Middle East respiratory syndrome coronavirus (MERS-CoV), first isolated in September 2012, infects cells lining the human airway, causing severe flu-like symptoms that, in some cases, lead to death. As of July 2, 2014, 824 confirmed cases of MERS-CoV infection, including at least 286 related deaths, have been reported to the World Health Organization. While there are currently no effective therapies against the virus, monoclonal antibodies (MAbs) may be a promising candidate. Having previously developed MAbs against other viruses, including the related severe acute respiratory syndrome coronavirus or SARS-CoV, Dimiter Dimitrov, Ph.D., of CCR’s Laboratory of Experimental Immunology (LEI), and his colleagues decided to pan a library of antigen binding fragments (Fab) for activity against MERS-CoV.

  16. Apollo 16 Lunar Module 'Orion' at the Descartes landing site

    Science.gov (United States)

    1972-01-01

    The Apollo 16 Lunar Module 'Orion' is part of the lunar scene at the Descartes landing site, as seen in the reproduction taken from a color television transmission made by the color TV camera mounted on the Lunar Roving Vehicle. Note the U.S. flag deployed on the left. This picture was made during the second Apollo 16 extravehicular activity (EVA-2).

  17. 1996 Hanford site report on land disposal restrictions for mixed waste

    International Nuclear Information System (INIS)

    Black, D.G.

    1996-04-01

    This report was submitted to meet the requirements of Hanford Federal Facility Agreement and Consent Order milestone M-26-OIF. This milestone requires the preparation of an annual report that covers characterization, treatment, storage, minimization, and other aspects of land disposal-restricted mixed waste management at the Hanford Site

  18. 1996 Hanford site report on land disposal restrictions for mixed waste

    Energy Technology Data Exchange (ETDEWEB)

    Black, D.G.

    1996-04-01

    This report was submitted to meet the requirements of Hanford Federal Facility Agreement and Consent Order milestone M-26-OIF. This milestone requires the preparation of an annual report that covers characterization, treatment, storage, minimization, and other aspects of land disposal-restricted mixed waste management at the Hanford Site.

  19. Environmental Conditions Constrain the Distribution and Diversity of Archaeal merA in Yellowstone National Park, Wyoming, U.S.A.

    Science.gov (United States)

    Wang, Y.; Boyd, E.; Crane, S.; Lu-Irving, P.; Krabbenhoft, D.; King, S.; Dighton, J.; Geesey, G.; Barkay, T.

    2011-01-01

    The distribution and phylogeny of extant protein-encoding genes recovered from geochemically diverse environments can provide insight into the physical and chemical parameters that led to the origin and which constrained the evolution of a functional process. Mercuric reductase (MerA) plays an integral role in mercury (Hg) biogeochemistry by catalyzing the transformation of Hg(II) to Hg(0). Putative merA sequences were amplified from DNA extracts of microbial communities associated with mats and sulfur precipitates from physicochemically diverse Hg-containing springs in Yellowstone National Park, Wyoming, using four PCR primer sets that were designed to capture the known diversity of merA. The recovery of novel and deeply rooted MerA lineages from these habitats supports previous evidence that indicates merA originated in a thermophilic environment. Generalized linear models indicate that the distribution of putative archaeal merA lineages was constrained by a combination of pH, dissolved organic carbon, dissolved total mercury and sulfide. The models failed to identify statistically well supported trends for the distribution of putative bacterial merA lineages as a function of these or other measured environmental variables, suggesting that these lineages were either influenced by environmental parameters not considered in the present study, or the bacterial primer sets were designed to target too broad of a class of genes which may have responded differently to environmental stimuli. The widespread occurrence of merA in the geothermal environments implies a prominent role for Hg detoxification in these environments. Moreover, the differences in the distribution of the merA genes amplified with the four merA primer sets suggests that the organisms putatively engaged in this activity have evolved to occupy different ecological niches within the geothermal gradient. ?? 2011 Springer Science+Business Media, LLC.

  20. Environmental conditions constrain the distribution and diversity of archaeal merA in Yellowstone National Park, Wyoming, U.S.A.

    Science.gov (United States)

    Wang, Yanping; Boyd, Eric; Crane, Sharron; Lu-Irving, Patricia; Krabbenhoft, David; King, Susan; Dighton, John; Geesey, Gill; Barkay, Tamar

    2011-11-01

    The distribution and phylogeny of extant protein-encoding genes recovered from geochemically diverse environments can provide insight into the physical and chemical parameters that led to the origin and which constrained the evolution of a functional process. Mercuric reductase (MerA) plays an integral role in mercury (Hg) biogeochemistry by catalyzing the transformation of Hg(II) to Hg(0). Putative merA sequences were amplified from DNA extracts of microbial communities associated with mats and sulfur precipitates from physicochemically diverse Hg-containing springs in Yellowstone National Park, Wyoming, using four PCR primer sets that were designed to capture the known diversity of merA. The recovery of novel and deeply rooted MerA lineages from these habitats supports previous evidence that indicates merA originated in a thermophilic environment. Generalized linear models indicate that the distribution of putative archaeal merA lineages was constrained by a combination of pH, dissolved organic carbon, dissolved total mercury and sulfide. The models failed to identify statistically well supported trends for the distribution of putative bacterial merA lineages as a function of these or other measured environmental variables, suggesting that these lineages were either influenced by environmental parameters not considered in the present study, or the bacterial primer sets were designed to target too broad of a class of genes which may have responded differently to environmental stimuli. The widespread occurrence of merA in the geothermal environments implies a prominent role for Hg detoxification in these environments. Moreover, the differences in the distribution of the merA genes amplified with the four merA primer sets suggests that the organisms putatively engaged in this activity have evolved to occupy different ecological niches within the geothermal gradient.

  1. Mars Science Laboratory: Mission, Landing Site, and Initial Results

    Science.gov (United States)

    Grotzinger, John; Blake, D.; Crisp, J.; Edgett, K.; Gellert, R.; Gomez-Elvira, J.; Hassler, D.; Mahaffy, P.; Malin, M.; Meyer, M.; Mitrofanov, I.; Vasavada, A.; Wiens, R.

    2012-10-01

    Scheduled to land on August 5, 2012, the Mars Science Laboratory rover, Curiosity, will conduct an investigation of modern and ancient environments. Recent mission results will be discussed. Curiosity has a lifetime of at least one Mars year ( 23 months), and drive capability of at least 20 km. The MSL science payload was specifically assembled to assess habitability and includes a gas chromatograph-mass spectrometer and gas analyzer that will search for organic carbon in rocks, regolith fines, and the atmosphere; an x-ray diffractometer that will determine mineralogical diversity; focusable cameras that can image landscapes and rock/regolith textures in natural color; an alpha-particle x-ray spectrometer for in situ determination of rock and soil chemistry; a laser-induced breakdown spectrometer to remotely sense the chemical composition of rocks and minerals; an active neutron spectrometer designed to search for water in rocks/regolith; a weather station to measure modern-day environmental variables; and a sensor designed for continuous monitoring of background solar and cosmic radiation. The 155-km diameter Gale Crater was chosen as Curiosity’s field site based on several attributes: an interior mound of ancient flat-lying strata extending almost 5 km above the elevation of the landing site; the lower few hundred meters of the mound show a progression with relative age from clay-bearing to sulfate-bearing strata, separated by an unconformity from overlying likely anhydrous strata; the landing ellipse is characterized by a mixture of alluvial fan and high thermal inertia/high albedo stratified deposits; and a number of stratigraphically/geomorphically distinct fluvial features. Gale’s regional context and strong evidence for a progression through multiple potentially habitable environments, represented by a stratigraphic record of extraordinary extent, insure preservation of a rich record of the environmental history of early Mars.

  2. A pandemic risk assessment of middle east respiratory syndrome coronavirus (MERS-CoV in Saudi Arabia

    Directory of Open Access Journals (Sweden)

    Saleh A. Eifan

    2017-11-01

    Full Text Available Since the initial emergence of Middle East respiratory syndrome coronavirus (MERS-CoV in 2012, a high incidence rate has been observed in Saudi Arabia. This suggests that the country is at continuous risk. The epidemic level of MERS-CoV infection was examined in Saudi Arabia by the Susceptible-Infectious-Recovered (SIR model using a Bayesian approach for estimation of time dependent reproduction number (R across a two-year interval (May, 2013-May, 2015 in five defined clusters, followed by sensitivity analysis of the most significant clusters. Significant MERS-CoV peaks were detected in the period between March and May of each year. Moreover, MERS-CoV infection was highlighted in western (40.8% and central (31.9% regions, followed by eastern region (20%. The temporal-based Bayesian approach indicated a sub-critical epidemic in all regions in the baseline scenario (R: 0.85–0.97. However, R potential limit was exceeded in the sensitivity analysis scenario in only central and western regions (R: 1.08–1.12 that denoted epidemic level in those regions. The impact of sporadic cases was found relatively insignificant and pinpointed to the lack of zoonotic influence on MERS-CoV transmission dynamics. The results of current study would be helpful for evaluation of future progression of MERS-CoV infections, better understanding and control interventions.

  3. Artist's concept of eastward view of Apollo 16 Descartes landing site

    Science.gov (United States)

    1972-01-01

    An artist's concept illustrating an eastward view of the Apollo 16 Descartes landing site. The white overlay indicates the scheduled tranverses by the Apollo 16 astronauts in the Lunar Roving Vehicle. The Roman numerals are the extravehicular activities (EVA's); and the Arabic numbers are the station stops along the traverse.

  4. The application of remote sensing in detail land use mapping of RDE site, Puspiptek Serpong

    International Nuclear Information System (INIS)

    Heni Susiati; Habib Subagio

    2016-01-01

    Land cover mapping and its development has been performed in a detail scale (1:5000) within the radius of 5 km from the center of Experimental Power Reactor (RDE) site at Kawasan Nuklir Serpong (KNS), PUSPIPTEK Serpong. The objective of this study is to establish land cover database in a detail scale 1:5000 as part of the preparation toward RDE development plan and also to complete the land cover map of a scale 1:10.000. The research method is accomplished in several stages, namely data collection and processing of high-resolution satellite imagery and aerial photographs, field surveys, land use analysis within the radius of 300 - 500 m, 1 km, 2 km, 3 km, 4 km and 5 km from the RDE site as well as analysis of land use change by 2014-2015. Satellite image processing is carried out at Center for Land Mapping and Atlas, Badan Informasi Geospasial (BIG). Data processing is done by using ArcGis and Er Mapper software, whereas the satellite image analysis is executed by using Image Analysis as one of tool in ArcGis software. The result shows that KNS land cover outside the radius of 3 km is a dense residential in many places. Analysis of land use change by year 2014- 2015 shows that vast development of residential has occur which demonstrated by the increase of residential area in North-East of PUSPIPTEK. (author)

  5. Analysis of local slopes at the InSight landing site on Mars

    Science.gov (United States)

    Fergason, Robin L.; Kirk, Randolph L.; Cushing, Glen; Galuszka, Donna M.; Golombek, Matthew P.; Hare, Trent M.; Howington-Kraus, Elpitha; Kipp, Devin M; Redding, Bonnie L.

    2017-01-01

    To evaluate the topography of the surface within the InSight candidate landing ellipses, we generated Digital Terrain Models (DTMs) at lander scales and those appropriate for entry, descent, and landing simulations, along with orthoimages of both images in each stereopair, and adirectional slope images. These products were used to assess the distribution of slopes for each candidate ellipse and terrain type in the landing site region, paying particular attention to how these slopes impact InSight landing and engineering safety, and results are reported here. Overall, this region has extremely low slopes at 1-meter baseline scales and meets the safety constraints of the InSight lander. The majority of the landing ellipse has a mean slope at 1-meter baselines of 3.2°. In addition, a mosaic of HRSC, CTX, and HiRISE DTMs within the final landing ellipse (ellipse 9) was generated to support entry, descent, and landing simulations and evaluations. Several methods were tested to generate this mosaic and the NASA Ames Stereo Pipeline program dem_mosaic produced the best results. For the HRSC-CTX-HiRISE DTM mosaic, more than 99 % of the mosaic has slopes less than 15°, and the introduction of artificially high slopes along image seams was minimized.

  6. Healthcare Workers Emotions, Perceived Stressors and Coping Strategies During a MERS-CoV Outbreak.

    Science.gov (United States)

    Khalid, Imran; Khalid, Tabindeh J; Qabajah, Mohammed R; Barnard, Aletta G; Qushmaq, Ismael A

    2016-03-01

    Healthcare workers (HCWs) are at high risk of contracting Middle East respiratory syndrome coronavirus (MERS-CoV) during an epidemic. We explored the emotions, perceived stressors, and coping strategies of healthcare workers who worked during a MERS-CoV outbreak in our hospital. A cross-sectional descriptive survey design. A tertiary care hospital. HCWs (150) who worked in high risk areas during the April-May 2014 MERS-CoV outbreak that occurred in Jeddah, Saudi Arabia. We developed and administered a "MERS-CoV staff questionnaire" to study participants. The questionnaire consisted of 5 sections with 72 questions. The sections evaluated hospital staffs emotions, perceived stressors, factors that reduced their stress, coping strategies, and motivators to work during future outbreaks. Responses were scored on a scale from 0-3. The varying levels of stress or effectiveness of measures were reported as mean and standard deviation, as appropriate. Completed questionnaires were returned by 117 (78%) of the participants. The results had many unique elements. HCWs ethical obligation to their profession pushed them to continue with their jobs. The main sentiments centered upon fear of personal safety and well-being of colleagues and family. Positive attitudes in the workplace, clinical improvement of infected colleagues, and stoppage of disease transmission among HCWs after adopting strict protective measures alleviated their fear and drove them through the epidemic. They appreciated recognition of their efforts by hospital management and expected similar acknowledgment, infection control guidance, and equipment would entice them to work during future epidemics. The MERS-CoV outbreak was a distressing time for our staff. Hospitals can enhance HCWs experiences during any future MERS-CoV outbreak by focusing on the above mentioned aspects. © 2016 Marshfield Clinic.

  7. Value, market preferences and trade of Beche-de-mer from Pacific Island sea cucumbers.

    Directory of Open Access Journals (Sweden)

    Steven W Purcell

    Full Text Available Market preferences of natural resources contribute to shape their exploitation and production. Beche-de-mer, the product after gutting, cooking, salting and drying sea cucumbers, is exported worldwide to Asian dried seafood markets. A better understanding of the trade, value and market preferences of Pacific island beche-de-mer could identify critical postharvest processing techniques and management strategies for fisheries and aquaculture. Data were collected on export prices and trade of beche-de-mer from Kiribati, Fiji, Tonga and New Caledonia, and the selling prices, respective sizes and organoleptic properties of the products in stores in China. Export prices varied considerably within and among the four countries and low-value species were the most exported by volume. Most of the beche-de-mer from the four Pacific islands is exported to Hong Kong, where quality products are sold and others are distributed to mainland China. Prices of the beche-de-mer in Chinese stores varied up to ten-fold and were mostly influenced by species, body size and, to a lesser extent, physical damage to the products. Market prices across species (averaging US$15-385 kg-1 appear to have mostly increased six- to twelve-fold over the past decade. The data allude that fisheries for Holothuria scabra, H. lessoni, H. fuscogilva, H. whitmaei and Thelenota ananas should be most carefully managed because they were the highest-value species and under greatest demand. The relationships between size of beche-de-mer and sale price were species specific and highly varied. This study also highlights the need for better regulations and/or enforcement of minimum size limits in sea cucumber fisheries, which can help to maximise economic benefits of wild stocks.

  8. Using MCDA and GIS for hazardous waste landfill siting considering land scarcity for waste disposal.

    Science.gov (United States)

    De Feo, Giovanni; De Gisi, Sabino

    2014-11-01

    The main aim of this study was to develop a procedure that minimizes the wasting of space for the siting of hazardous waste landfills as part of a solid waste management system. We wanted to tackle the shortage of land for waste disposal that is a serious and growing problem in most large urban regions. The procedure combines a multi-criteria decision analysis (MCDA) approach with a geographical information system (GIS). The GIS was utilised to obtain an initial screening in order to eliminate unsuitable areas, whereas the MCDA was developed to select the most suitable sites. The novelty of the proposed siting procedure is the introduction of a new screening phase before the macro-siting step aimed at producing a "land use map of potentially suitable areas" for the siting of solid waste facilities which simultaneously takes into consideration all plant types. The issue of obtaining sites evaluations of a specific facility was coupled with the issue of not wasting land appropriate to facilitate other types of waste management options. In the developed case study, the use of an innovative criteria weighting tool (the "Priority Scale") in combination with the Analytic Hierarchy Process was useful to easier define the priorities of the evaluation criteria in comparison with other classic methods such as the Paired Comparison Technique in combination with the Simple Additive Weighting method. Copyright © 2014 Elsevier Ltd. All rights reserved.

  9. Wind-Driven Erosion and Exposure Potential at Mars 2020 Rover Candidate-Landing Sites

    Science.gov (United States)

    Chojnacki, Matthew; Banks, Maria; Urso, Anna

    2018-01-01

    Aeolian processes have likely been the predominant geomorphic agent for most of Mars’ history and have the potential to produce relatively young exposure ages for geologic units. Thus, identifying local evidence for aeolian erosion is highly relevant to the selection of landing sites for future missions, such as the Mars 2020 Rover mission that aims to explore astrobiologically relevant ancient environments. Here we investigate wind-driven activity at eight Mars 2020 candidate-landing sites to constrain erosion potential at these locations. To demonstrate our methods, we found that contemporary dune-derived abrasion rates were in agreement with rover-derived exhumation rates at Gale crater and could be employed elsewhere. The Holden crater candidate site was interpreted to have low contemporary erosion rates, based on the presence of a thick sand coverage of static ripples. Active ripples at the Eberswalde and southwest Melas sites may account for local erosion and the dearth of small craters. Moderate-flux regional dunes near Mawrth Vallis were deemed unrepresentative of the candidate site, which is interpreted to currently be experiencing low levels of erosion. The Nili Fossae site displayed the most unambiguous evidence for local sand transport and erosion, likely yielding relatively young exposure ages. The downselected Jezero crater and northeast Syrtis sites had high-flux neighboring dunes and exhibited substantial evidence for sediment pathways across their ellipses. Both sites had relatively high estimated abrasion rates, which would yield young exposure ages. The downselected Columbia Hills site lacked evidence for sand movement, and contemporary local erosion rates are estimated to be relatively low. PMID:29568719

  10. Wind-Driven Erosion and Exposure Potential at Mars 2020 Rover Candidate-Landing Sites

    Science.gov (United States)

    Chojnacki, Matthew; Banks, Maria; Urso, Anna

    2018-02-01

    Aeolian processes have likely been the predominant geomorphic agent for most of Mars' history and have the potential to produce relatively young exposure ages for geologic units. Thus, identifying local evidence for aeolian erosion is highly relevant to the selection of landing sites for future missions, such as the Mars 2020 Rover mission that aims to explore astrobiologically relevant ancient environments. Here we investigate wind-driven activity at eight Mars 2020 candidate-landing sites to constrain erosion potential at these locations. To demonstrate our methods, we found that contemporary dune-derived abrasion rates were in agreement with rover-derived exhumation rates at Gale crater and could be employed elsewhere. The Holden crater candidate site was interpreted to have low contemporary erosion rates, based on the presence of a thick sand coverage of static ripples. Active ripples at the Eberswalde and southwest Melas sites may account for local erosion and the dearth of small craters. Moderate-flux regional dunes near Mawrth Vallis were deemed unrepresentative of the candidate site, which is interpreted to currently be experiencing low levels of erosion. The Nili Fossae site displayed the most unambiguous evidence for local sand transport and erosion, likely yielding relatively young exposure ages. The downselected Jezero crater and northeast Syrtis sites had high-flux neighboring dunes and exhibited substantial evidence for sediment pathways across their ellipses. Both sites had relatively high estimated abrasion rates, which would yield young exposure ages. The downselected Columbia Hills site lacked evidence for sand movement, and contemporary local erosion rates are estimated to be relatively low.

  11. Inert gas investigations of the Apollo 15 and 17 landing sites

    International Nuclear Information System (INIS)

    Jordan, J.L.

    1975-01-01

    The inert gas contents in size fractions of the following fines from the Apollo 15 site: 15071, 15501, 15511, 15421, and 15080 has been determined. In addition, the same for size fractions of fines 79221, 79241, and 79261 from depths of 0 to 2 cm, 2 to 7 cm, and 7 to 17 cm in a trench near Van Serg Crater at the Apollo 17 site was determined. The very low gas contents and lack of anticorrelation with grain diameter of 15421 suggests that these fines are undersaturated with respect to solar wind irradiation. The decrease in slope of the curves for gas concentration vs grain diameter of 15071 for successively heavier gases is interpreted to be the effects of the Rosiwal principle + comminution + agglutinate formation. Evidence for heavily irradiated (with respect to cosmic rays) zones deep within or beneath the regolith exists at both Apollo 15 and 17 landing sites. This may in part explain the ''missing'' cosmic ray record. Scatter between ''young'' and ''old'' age limits in 40 Ar vs 36 Ar plots exists for 15511, and the 3 trench fines from the Apollo 17 landing site. In the case of 15511 the observed ratios suggest that these may be the result of large impacts on the Apennine Front contributing material to the site where 15511 was collected. The observed 40 Ar/ 36 Ar ratios in the trench fines may be the result of excavation of materials with high 40 Ar/ 36 Ar ratios during the Van Serg event. The low apparent 40 K-- 40 Ar ages of the Apollo 15 fines are interpreted to be the result of addition of young 40 K-- 40 Ar age material (less than 1.8 by) from Autolycus and Aristillus, two large craters north of the site, to the older (3.3 by) mare materials

  12. A conservative region of the mercuric reductase gene (merA as a molecular marker of bacterial mercury resistance Região conservada do gene da mercúrio redutase (merA como marcador molecular da resistência bacteriana ao mercúrio

    Directory of Open Access Journals (Sweden)

    Adriana Sotero-Martins

    2008-06-01

    Full Text Available The most common bacterial mercury resistance mechanism is based on the reduction of Hg(II to Hg0, which is dependent of the mercuric reductase enzyme (MerA activity. The use of a 431 bp fragment of a conservative region of the mercuric reductase (merA gene was applied as a molecular marker of this mechanism, allowing the identification of mercury resistant bacterial strains.O mecanismo de resistência bacteriana ao mercúrio mais comum é baseada na redução do Hg(II a Hg0, através da atividade da enzima mercúrio redutase (MerA. O uso do fragmento de 431 pb amplificado de uma região conservada do gene merA, que codifica a enzima MerA,foi utilizado como marcador molecular deste mecanismo, permitindo a identificação de bactérias resistentes ao mercúrio.

  13. The Synthesis and X-ray Structural Characterization of mer and fac isomers of the Technetium(I) Nitrosyl Complex [TcCl(2)(NO)(PNPpr)].

    Science.gov (United States)

    Nicholson, T L; Mahmood, A; Refosco, F; Tisato, F; Müller, P; Jones, A G

    2009-08-01

    The nitrosyl complex H[TcNOCl(4)] reacts with the tridentate ligand bis[(2-diphenylphosphino)propyl]amine (PNPpr) to yield a mixture of the mer or fac isomers of [TcCl(2)(NO)(PNPpr)]. In acetonitrile, where the ligand is freely soluble, reaction occurs at room temperature to yield mostly the mer isomer with the linear nitrosyl ligand cis to the amine ligand; and the phosphine ligands arranged in a mutually trans orientation. The reaction in methanol requires reflux to dissolve the lipophilic ligand and generates the fac isomer of [TcCl2(NO)(PNPpr)] as the major product, with the tridentate ligand in a facial arrangement, leaving the chlorides and nitrosyl ligand in the remaining facial sites. The steric bulk of the tridentate ligand's diphenylphophino- moieties results in a significant distortion from octahedral geometry, with the P-Tc-P bond angle expanded to 99.48(4)°. The infrared spectra display absorptions from these nitrosyl ligands in the 1700 and 1800 cm(-1) regions for the fac and mer isomers respectively. The ESI(+) mass spectra each display the parent ion at 647 m/z.

  14. Use of agricultural land evaluation and site assessment in Linn County, Oregon, USA

    Science.gov (United States)

    Huddleston, J. Herbert; Pease, James R.; Forrest, William G.; Hickerson, Hugh J.; Langridge, Russell W.

    1987-07-01

    Oregon state law requires each county in the state to identify agricultural land and enact policies and regulations to protect agricultural land use. State guidelines encourage the preservation of large parcels of agricultural land and discourage partitioning of agricultural land and construction of nonfarm dwellings in agricultural areas. A land evaluation and site assessment (LESA) system was developed in Linn County to aid in the identification of agricultural land and provide assistance to decision makers concerning the relative merits of requests to partition existing parcels of ricultural land and introduce nonagricultural uses. Land evaluation was determined by calculating soil potential ratings for each agricultural soil in the county based on the soil potentials for winter wheat, annual ryegrass, permanent pasture, and irrigated sweet corn. Soil potential ratings were expressed on a scale of 0 to 150 points. The land evaluation score for a parcel consists of the weighted average soil potential rating for all of the soils in the parcel, weighted by the percentage of each soil present in the parcel. Site assessment was based on the size of a parcel and on the amount of existing conflict between agricultural and nonagricultural uses, particularly rural residential uses, both adjacent to and in the vicinity of a parcel. Parcel size refers to both size in relation to a typical field and size in relation to a typical farm unit. Conflict takes into account the number of nonfarm dwellings within 1/4 mile (0.4 km) of a parcel, the amount of the perimeter that adjoins conflicting land uses, and the residential density adjacent to the parcel. Empirical scales were derived for assigning points to each of the site assessment factors. Both parcel size and conflict were worth 75 points in the model. For parcel size, 45 points were allocated to field size and 30 points to farm-unit size. For conflict, 30 points were allocated to nonfarm dwellings within 1/4 mile and 45

  15. Assessment of land use/land cover dynamics of Tso Moriri Lake, a Ramsar site in India.

    Science.gov (United States)

    Gupta, Sharad Kumar; Shukla, Dericks Praise

    2016-12-01

    Wetlands accounts for 6% area of the Earth's land cover and nearly 17% of the Hindu Kush Himalayan region. They are of utmost importance to climate dynamics and are critical links between terrestrial and aquatic ecosystems. Despite the need of high attention towards conserving and managing wetland resources, mapping them is a least practiced activity. This study shows the temporal change in land use and land cover pattern of Tso Moriri Lake, the highest altitude lake in India and designated as Ramsar site in year 2002, using multi-sensor and multi-date imagery. Due to change in hydro-meteorological conditions of the region, this lake area has been reduced. Since the lake recharge is dependent on snowmelt, hence change in climatic conditions (less snowfall in winters), to a certain extent, is also responsible for the decrease in water level and water spread of the lake. The result shows that the lake area has reduced approximately 2 km 2 in the last 15 years, and also, agriculture, grasslands, and vegetation cover have increased to a significant extent. Agricultural land and grasslands have doubled while the vegetation cover has increased more than six times, showing the coupled effect of climate change and anthropogenic activities. Trend of temperature and precipitation corroborates the effects of climate change in this region.

  16. Development of corrective measures and site stabilization technologies for shallow land burial facilities at semiarid sites

    International Nuclear Information System (INIS)

    Nyhan, J.W.; Abeele, W.V.

    1986-01-01

    The overall purpose of the corrective measures task performed for the National Low-Level Waste Management Program has been to develop and test methods that can be used to correct any actual or anticipated problems with new and existing shallow land burial (SLB) sites in a semiarid environment. These field tests have not only evaluated remedial actions, but have also investigated phenomena suspected of being a possible problem at semiarid SLB sites. The approach we have taken in developing remedial action and site closure technologies for low-level waste sites is to recognize that physical and biological processes affecting site integrity are interdependent, and therefore, cannot be treated as separate problems. The field experiments performed for this task were to identify, evaluate, and model erosion control technologies, field test second generation biointrusion barriers, determine by field experiments the extent of upward radionuclide migration due to moisture cycling, and measure the effects of subsidence on remedial action of other system components. Progress made in each of these research areas is described

  17. Prevalence of Middle East respiratory syndrome coronavirus (MERS-CoV) in dromedary camels in Abu Dhabi Emirate, United Arab Emirates.

    Science.gov (United States)

    Yusof, Mohammed F; Eltahir, Yassir M; Serhan, Wissam S; Hashem, Farouk M; Elsayed, Elsaeid A; Marzoug, Bahaaeldin A; Abdelazim, Assem Si; Bensalah, Oum Keltoum A; Al Muhairi, Salama S

    2015-06-01

    High seroprevalence of Middle East respiratory syndrome corona virus (MERS-CoV) in dromedary camels has been previously reported in United Arab Emirates (UAE). However, the molecular detection of the virus has never been reported before in UAE. Of the 7,803 nasal swabs tested in the epidemiological survey, MERS-CoV nucleic acid was detected by real-time PCR in a total of 126 (1.6 %) camels. Positive camels were detected at the borders with Saudi Arabia and Oman and in camels' slaughter houses. MERS-CoV partial sequences obtained from UAE camels were clustering with human- and camel-derived MERS-CoV sequences in the same geographic area. Results provide further evidence of MERS-CoV zoonosis.

  18. Modelling air pollution transfers in the Fos-Sur-Mer area

    International Nuclear Information System (INIS)

    Dibi, Niagne Martin

    1985-01-01

    A 'puff' gaussian model with determined standard deviations based on transfer times of two classes of vertical stability of the atmosphere was developed in order to evaluate the atmospheric dispersion of industrial discharges in the Fos-sur-Mer area. This research was carried out within the framework of a large study for the processing of the data obtained during the measurement campaign organized by the European Communities. The model in its analytic form allows consideration of the main phenomena which modify the puff content during the transfer: reflectance, wet and dry deposition, physical-chemical transformation of the pollutant SO 2 . The model includes the site meteorological parameters measured in three dimensions (wind speed and direction at ground level and in altitude) and the characteristics of the different stacks. It can also calculate pollutions resulting from a short emission or from continuous emissions. Examples are presented. (author) [fr

  19. The receptor binding domain of MERS-CoV: The dawn of vaccine and treatment development

    Directory of Open Access Journals (Sweden)

    Nan Zhou

    2014-03-01

    Full Text Available The newly emerged Middle East respiratory syndrome coronavirus (MERS-CoV is becoming another “SARS-like” threat to the world. It has an extremely high death rate (∼50% as there is no vaccine or efficient therapeutics. The identification of the structures of both the MERS-CoV receptor binding domain (RBD and its complex with dipeptidyl peptidase 4 (DPP4, raises the hope of alleviating this currently severe situation. In this review, we examined the molecular basis of the RBD-receptor interaction to outline why/how could we use MERS-CoV RBD to develop vaccines and antiviral drugs.

  20. Preliminary results of the search for possible Martian landing sites to be considered for future European exploration missions

    Science.gov (United States)

    Martin, P.

    2007-08-01

    The recently adopted European Space Policy aims at expanding and coordinating the role and activities of Europe's space actors with the purpose of increasing both scientific knowledge in selected space domains and the European presence in the Solar System, as well as optimising the relevant societal benefits. With our Moon and in particular Mars as primary targets of exploration goals for the Solar System, and following a number of very successful orbital missions performing detailed remote sensing and mapping of these planetary bodies, probe landings on the surface of the Moon and Mars represent the next stepping stone of the exploration of our close planetary environment. Along with developing the hardware capabilities required for Europe to reach such ambitious goals, it therefore becomes increasingly important to pinpoint with precision a number of landing sites well suited for the safety and scientific success of future robotic missions. Focusing on Mars, and although a number of candidate landing sites and associated catalogs with available scientific justification already exist, the results being obtained by orbiters such as Mars Express and Mars Reconnaissance Orbiter are fundamentally transforming our knowledge of the planet's surface, which in turns highlights the need to review, update and revise the candidate sites for future landing missions on Mars. Detailed investigations of possible future Martian landing sites for European missions are ongoing, based on the wealth of scientific data and high-resolution mapping products available. In order to support the identification of suitable sites, various mapping products (geological, hyperspectral and compositional) can be consolidated, and various areas of Mars identified in the recent scientific literature as primary targets for landing can be taken into account for further, refined assessment of their suitability for landing. Seasonal and climatic effects potentially influencing landing shall also be

  1. Siting Urban Agriculture as a Green Infrastructure Strategy for Land Use Planning in Austin, TX

    Directory of Open Access Journals (Sweden)

    Charles M. Rogers

    2016-04-01

    Full Text Available Green infrastructure refers to a type of land use design that mimics the natural water cycle by using the infiltration capacities of vegetation, soils, and other natural processes to mitigate stormwater runoff. As a multifunctional landscape, urban agriculture should be seen as a highly beneficial tool for urban planning not only because of its ability to function as a green stormwater management strategy, but also due to the multiple social and environmental benefits it provides. In 2012, the city of Austin adopted a major planning approach titled the “Imagine Austin Comprehensive Plan” (IACP outlining the city’s vision for future growth and land use up to 2039. The plan explicitly addresses the adoption of green infrastructure as a target for future land use with urban agriculture as a central component. Addressing this area of land use planning will require tools that can locate suitable areas within the city ideal for the development of green infrastructure. In this study, a process was developed to create a spatially explicit method of siting urban agriculture as a green infrastructure tool in hydrologically sensitive areas, or areas prone to runoff, in east Austin. The method uses geospatial software to spatially analyze open access datasets that include land use, a digital elevation model, and prime farmland soils. Through this method a spatial relationship can be made between areas of high surface runoff and where the priority placement of urban farms should be sited as a useful component of green infrastructure. Planners or geospatial analysts could use such information, along with other significant factors and community input, to aid decision makers in the placement of urban agriculture. This spatially explicit approach for siting potential urban farms, will support the integration of urban agriculture as part of the land use planning of Austin.

  2. Distinct immune response in two MERS-CoV-infected patients: can we go from bench to bedside?

    Directory of Open Access Journals (Sweden)

    Emmanuel Faure

    Full Text Available One year after the occurrence of the first case of infection by the Middle East Respiratory Syndrome coronavirus (MERS-CoV there is no clear consensus on the best treatment to propose. The World Health Organization, as well as several other national agencies, are still working on different clinical approaches to implement the most relevant treatment in MERS-CoV infection. We compared innate and adaptive immune responses of two patients infected with MERS-CoV to understand the underlying mechanisms involved in the response and propose potential therapeutic approaches. Broncho-alveolar lavage (BAL of the first week and sera of the first month from the two patients were used in this study. Quantitative polymerase chain reaction (qRTPCR was performed after extraction of RNA from BAL cells of MERS-CoV infected patients and control patients. BAL supernatants and sera were used to assess cytokines and chemokines secretion by enzyme-linked immunosorbent assay. The first patient died rapidly after 3 weeks in the intensive care unit, the second patient still recovers from infection. The patient with a poor outcome (patient 1, compared to patient 2, did not promote type-1 Interferon (IFN, and particularly IFNα, in response to double stranded RNA (dsRNA from MERS-CoV. The absence of IFNα, known to promote antigen presentation in response to viruses, impairs the development of a robust antiviral adaptive Th-1 immune response. This response is mediated by IL-12 and IFNγ that decreases viral clearance; levels of both of these mediators were decreased in patient 1. Finally, we confirm previous in vitro findings that MERS-CoV can drive IL-17 production in humans. Host recognition of viral dsRNA determines outcome in the early stage of MERS-CoV infection. We highlight the critical role of IFNα in this initial stage to orchestrate a robust immune response and bring substantial arguments for the indication of early IFNα treatment during MERS-CoV infection.

  3. MOC's Highest Resolution View of Mars Pathfinder Landing Site

    Science.gov (United States)

    2000-01-01

    [figure removed for brevity, see original site] (A) Mars Pathfinder site, left: April 1998; right: January 2000. [figure removed for brevity, see original site] (B) top: April 1998; bottom: January 2000.Can Mars Global Surveyor's 1.5 meter (5 ft) per pixel camera be used to find any evidence as to the fate of the Mars Polar Lander that was lost on December 3, 1999? One way to find out is to look for one of the other Mars landers and determine what, if anything, can be seen. There have been three successful Mars lander missions: Viking 1 (July 1976), Viking 2 (September 1976), and Mars Pathfinder (July 1997). Of these, the location of Mars Pathfinder is known the best because there are several distinct landmarks visible in the lander's images that help in locating the spacecraft. The MGS MOC Operations Team at Malin Space Science Systems has been tasked since mid-December 1999 with looking for the lost Polar Lander. Part of this effort has been to test the capabilities of MOC by taking a picture of the landing site of Mars Pathfinder.An attempt to photograph the Pathfinder site was made once before, in April 1998, by turning the entire MGS spacecraft so that the camera could point at the known location of the Mars Pathfinder lander. Turning the MGS spacecraft like this is not a normal operation--it takes considerable planning, and disrupts the on-going, normal acquisition of science data. It took 3 attempts to succeed, but on April 22, 1998, MOC acquired the picture seen on the left side of Figure A, above. The three near-by major landmarks that were visible to the Pathfinder's cameras are labeled here (North Peak, Big Crater, Twin Peaks). It was known at the time that this image was not adequate to see the Pathfinder lander because the camera was not in focus and had a resolution of only 3.3 meters (11 ft) per pixel. In this and all other images shown here, north is up. All views of the 1998 MOC image are illuminated from the lower right, all views of the 2000 MOC

  4. 2003 Wastewater Land Application Site Performance Reports for the Idaho National Engineering and Environmental Laboratory

    Energy Technology Data Exchange (ETDEWEB)

    Teresa R. Meachum

    2004-02-01

    The 2003 Wastewater Land Application Site Performance Reports for the Idaho National Engineering and Environmental Laboratory describe the conditions for the facilities with State of Idaho Wastewater Land Application Permits. Permit-required monitoring data are summarized, and permit exceedences or environmental impacts relating to the operations of the facilities during the 2003 permit year are discussed.

  5. Case studies, cross-site comparisons, and the challenge of generalization: comparing agent-based models of land-use change in frontier regions.

    Science.gov (United States)

    Parker, Dawn C; Entwisle, Barbara; Rindfuss, Ronald R; Vanwey, Leah K; Manson, Steven M; Moran, Emilio; An, Li; Deadman, Peter; Evans, Tom P; Linderman, Marc; Rizi, S Mohammad Mussavi; Malanson, George

    2008-01-01

    Cross-site comparisons of case studies have been identified as an important priority by the land-use science community. From an empirical perspective, such comparisons potentially allow generalizations that may contribute to production of global-scale land-use and land-cover change projections. From a theoretical perspective, such comparisons can inform development of a theory of land-use science by identifying potential hypotheses and supporting or refuting evidence. This paper undertakes a structured comparison of four case studies of land-use change in frontier regions that follow an agent-based modeling approach. Our hypothesis is that each case study represents a particular manifestation of a common process. Given differences in initial conditions among sites and the time at which the process is observed, actual mechanisms and outcomes are anticipated to differ substantially between sites. Our goal is to reveal both commonalities and differences among research sites, model implementations, and ultimately, conclusions derived from the modeling process.

  6. KGCAK: a K-mer based database for genome-wide phylogeny and complexity evaluation.

    Science.gov (United States)

    Wang, Dapeng; Xu, Jiayue; Yu, Jun

    2015-09-16

    The K-mer approach, treating genomic sequences as simple characters and counting the relative abundance of each string upon a fixed K, has been extensively applied to phylogeny inference for genome assembly, annotation, and comparison. To meet increasing demands for comparing large genome sequences and to promote the use of the K-mer approach, we develop a versatile database, KGCAK ( http://kgcak.big.ac.cn/KGCAK/ ), containing ~8,000 genomes that include genome sequences of diverse life forms (viruses, prokaryotes, protists, animals, and plants) and cellular organelles of eukaryotic lineages. It builds phylogeny based on genomic elements in an alignment-free fashion and provides in-depth data processing enabling users to compare the complexity of genome sequences based on K-mer distribution. We hope that KGCAK becomes a powerful tool for exploring relationship within and among groups of species in a tree of life based on genomic data.

  7. Occurrence of the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) across the Gulf Corporation Council countries: Four years update.

    Science.gov (United States)

    Aly, Mahmoud; Elrobh, Mohamed; Alzayer, Maha; Aljuhani, Sameera; Balkhy, Hanan

    2017-01-01

    The emergence of the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) infections has become a global issue of dire concerns. MERS-CoV infections have been identified in many countries all over the world whereas high level occurrences have been documented in the Middle East and Korea. MERS-CoV is mainly spreading across the geographical region of the Middle East, especially in the Arabian Peninsula, while some imported sporadic cases were reported from the Europe, North America, Africa, and lately Asia. The prevalence of MERS-CoV infections across the Gulf Corporation Council (GCC) countries still remains unclear. Therefore, the objective of the current study was to report the prevalence of MERS-CoV in the GCC countries and to also elucidate on its demographics in the Arabian Peninsula. To date, the World Health Organization (WHO) has reported 1,797 laboratory-confirmed cases of MERS-CoV infection since June 2012, involving 687 deaths in 27 different countries worldwide. Within a time span of 4 years from June 2012 to July 2016, we collect samples form MERS-CoV infected individuals from National Guard Hospital, Riyadh, and Ministry of health Saudi Arabia and other GCC countries. Our data comprise a total of 1550 cases (67.1% male and 32.9% female). The age-specific prevalence and distribution of MERS-CoV was as follow: countries was as follows: Saudi Arabia (1441 cases: 93%), Kuwait (4 cases: 0.3%), Bahrain (1 case: 0.1%), Oman (8 cases: 0.5%), Qatar (16 cases: 1.0%), and United Arab Emirates (80 cases: 5.2%). Thus, MERS-CoV was found to be more prevalent in Saudi Arabia especially in Riyadh, where 756 cases (52.4%) were the worst hit area of the country identified, followed by the western region Makkah where 298 cases (20.6%) were recorded. This prevalence update indicates that the Arabian Peninsula, particularly Saudi Arabia, is the hardest hit region regarding the emerging MERS-CoV infections worldwide. GCC countries including Saudi Arabia now have the

  8. A Comparative Study of Clinical Presentation and Risk Factors for Adverse Outcome in Patients Hospitalised with Acute Respiratory Disease Due to MERS Coronavirus or Other Causes.

    Directory of Open Access Journals (Sweden)

    Musa A Garbati

    Full Text Available Middle East Respiratory syndrome (MERS first emerged in Saudi Arabia in 2012 and remains a global health concern. The objective of this study was to compare the clinical features and risk factors for adverse outcome in patients with RT-PCR confirmed MERS and in those with acute respiratory disease who were MERS-CoV negative, presenting to the King Fahad Medical City (KFMC in Riyadh between October 2012 and May 2014. The demographics, clinical and laboratory characteristics and clinical outcomes of patients with RT-PCR confirmed MERS-CoV infection was compared with those testing negative MERS-CoV PCR. Health care workers (HCW with MERS were compared with MERS patients who were not health care workers. One hundred and fifty nine patients were eligible for inclusion. Forty eight tested positive for MERS CoV, 44 (92% being hospital acquired infections and 23 were HCW. There were 111 MERS-CoV negative patients with acute respiratory illnesses included in this study as "negative controls". Patient with confirmed MERS-CoV infection were not clinically distinguishable from those with negative MERS-CoV RT-PCR results although diarrhoea was commoner in MERS patients. A high level of suspicion in initiating laboratory tests for MERS-CoV is therefore indicated. Variables associated with adverse outcome were older age and diabetes as a co-morbid illness. Interestingly, co-morbid illnesses other than diabetes were not significantly associated with poor outcome. Health care workers with MERS had a markedly better clinical outcome compared to non HCW MERS patients.

  9. Association between land cover and Culicoides (Diptera: Ceratopogonidae) breeding sites on four Danish cattle farms

    DEFF Research Database (Denmark)

    Kirkeby, Carsten; Bødker, Rene; Stockmarr, Anders

    2009-01-01

    from 30 sampling points. Soil samples were set up in emergence chambers for hatching adult Culicoides. Two species of Culicoides (C punctatus and C pulicaris) emerged from nine of 12 soil samples from a wet, grazed field with manure. Seventy-two other samples from similar land cover on the three other......Biting midges of the genus Culicoides are vectors of bluetongue virus. Their larval habitats are poorly known in Northern Europe. Three classes of the CORINE land cover index, found within 300 in of four farms in Denmark, were used to stratify sampling sites for a total of 360 soil core samples...... farms were negative. Seven sampling points from pastures were incorrectly classified by CORINE. The remaining 23 sampling points were classified correctly. The visually observed land use was not sufficiently detailed to adequately predict Culicoides breeding sites in this study. The CORINE index failed...

  10. Serological evidence of MERS-CoV antibodies in dromedary camels (camelus dromedaries) in laikipia county, Kenya

    NARCIS (Netherlands)

    S.L. Deem (Sharon L.); E.M. Fèvre (Eric); M. Kinnaird (Margaret); A.S. Browne (A. Springer); D. Muloi (Dishon); G-J. Godeke (Gert-Jan); M.P.G. Koopmans D.V.M. (Marion); C.B.E.M. Reusken (Chantal)

    2015-01-01

    textabstractMiddle East respiratory syndrome coronavirus (MERS-CoV) is a recently identified virus causing severe viral respiratory illness in people. Little is known about the reservoir in the Horn of Africa. In Kenya, where no human MERS cases have been reported, our survey of 335 dromedary

  11. Water on Mars: Evidence from MER Mission Results

    Science.gov (United States)

    Landis, Geoffrey A.

    2004-01-01

    The Viking and the Mars Exploration Rover missions observed that the surface of Mars is encrusted by a thinly cemented layer, or "duricrust". Elemental analyzes at five sites on Mars show that these soils have sulfur content and chlorine content consistent with the presence of sulfates and halides as mineral cements. The soil is highly enriched in the salt-forming elements compared with rock. Analysis of the soil cementation indicates some features which may be evidence of liquid water. At both MER sites, duricrust textures revealed by the Microscopic Imager show features including the presence of fine sand-sized grains, some of which may be aggregates of fine silt and clay, surrounded by a pervasive light colored material that is associated with microtubular structures and networks of microfractures. Stereo views of undisturbed duricrust surfaces reveal rugged microrelief between 2-3 mm and minimal loose material. Comparisons of microscopic images of duricrust soils obtain before and after placement of the Mossbauer spectrometer indicate differing degrees of compaction and cementation. Two models of a transient water hypothesis are offered, a "top down" hypothesis that emphasizes the surface deposition of frost, melting and downward migration of liquid water and a "bottom up" alternative that proposes the presence of interstitial ice/brine, with the upward capillary migration of liquid water. The viability of both of these models ultimately hinges on the availability of seasonally transient liquid water for brief periods.

  12. Burial sites, informal rights and lost kingdoms: the contesting of land claims in Mpumalanga, South Africa

    OpenAIRE

    Deborah James

    2009-01-01

    In the new South Africa, the promise of land restitution raised millennial-style expectations amongst dispossessed and dispersed former landholders. Partly prompted by emerging policy discourses, iconic tropes of localised cultural experience such as grave sites, initiation lodges and cattle byres have acquired new significance: they became verifiable evidence of effective possession of – because proving what the Land Claims Commission calls ‘informal rights’ in – land. They thus became groun...

  13. Cultivation of hard-to-culture subsurface mercury-resistant bacteria and discovery of new merA gene sequences

    DEFF Research Database (Denmark)

    Rasmussen, L D; Zawadsky, C; Binnerup, S J

    2008-01-01

    different 16S rRNA gene sequences were observed, including Alpha-, Beta-, and Gammaproteobacteria; Actinobacteria; Firmicutes; and Bacteroidetes. The diversity of isolates obtained by direct plating included eight different 16S rRNA gene sequences (Alpha- and Betaproteobacteria and Actinobacteria). Partial...... sequencing of merA of selected isolates led to the discovery of new merA sequences. With phylum-specific merA primers, PCR products were obtained for Alpha- and Betaproteobacteria and Actinobacteria but not for Bacteroidetes and Firmicutes. The similarity to known sequences ranged between 89 and 95%. One...

  14. Improvement of an enzyme-linked immunosorbent assay for equine herpesvirus type 4 by using a synthetic-peptide 24-mer repeat sequence of glycoprotein G as an antigen.

    Science.gov (United States)

    Bannai, Hiroshi; Nemoto, Manabu; Tsujimura, Koji; Yamanaka, Takashi; Maeda, Ken; Kondo, Takashi

    2016-02-01

    To increase the sensitivity of an enzyme-linked immunosorbent assay (ELISA) for equine herpesvirus type 4 (EHV-4) that uses a 12-mer peptide of glycoprotein G (gG4-12-mer: MKNNPIYSEGSL) [4], we used a longer peptide consisting of a 24-mer repeat sequence (gG4-24-mer: MKNNPIYSEGSLMLNVQHDDSIHT) as an antigen. Sera of horses experimentally infected with EHV-4 reacted much more strongly to the gG4-24-mer peptide than to the gG4-12-mer peptide. We used peptide ELISAs to test paired sera from horses naturally infected with EHV-4 (n=40). gG4-24-mer ELISA detected 37 positive samples (92.5%), whereas gG4-12-mer ELISA detected only 28 (70.0%). gG4-24-mer ELISA was much more sensitive than gG4-12-mer ELISA.

  15. DIE RECHTSPOSITION DER EHRLICHEN UND UNEHRLICHEN BESITZER IN BEZUG AUF EIGENTÜMER

    Directory of Open Access Journals (Sweden)

    Jadranko Jug

    2017-01-01

    Full Text Available Diese Arbeit beschäftigt sich mit den Problemen, die mit der rechtlichen Stellung ehrlicher und unehrlicher Besitzer im Verhältnis zum Eigentümer verbunden sind, d.h. sie analysiert die Rechte des Besitzers und die Forderungen, welche der Besitzer vom Eigentümer verlangen kann, damit der Besitzer sein Besitz abgibt. Im Gegensatz dazu werden die Rechte und Anforderungen des Eigentümers in Bezug auf ehrliche und unehrliche Besitzer analysiert. In der Praxis entstehen Dilemmas, wie die wesentlichen und vorteilhaften Ausgaben des ehrlichen Besitzers bestimmt werden, welche Voraussetzungen es sind und bis zu welchen Zeitpunkt das Zurückbehaltungsrecht für die Vergütung dieser Ausgaben ausgeübt werden kann, wann die Verjährungsfrist anfängt und von welcher Bedeutung die Bestimmungen des Zivilverfahrensgesetzes in Bezug auf die ungerechte Anreicherung, die Geschäftsführung ohne Anordnung oder das Zurückbehaltungsrecht sind und welche Bestimmungen diese und ähnliche Fragen regeln. Die Antworten auf einige von diesen Dilemmas sind in der Rechtsprechung vorgelegt, weshalb die Analyse und Forschung der Rechtsprechung, insbesondere Entscheidungen des Obersten Gerichtshofs der Republik Kroatien, die grundlegende Methode dieser Arbeit ist. In der Einführung bietet diese Artikel die grundlegenden Merkmale des Begriffs des Besitzens und des Eigentumsbesitzes und die Art und Qualität des Besitzes an, um eine Grundlage für die anschließende Analyse der Rechtsposition des Eigentumsbesitzers in Bezug auf den Eigentümer zu schaffen.

  16. Cross host transmission in the emergence of MERS coronavirus

    NARCIS (Netherlands)

    C.B.E.M. Reusken (Chantal); V.S. Raj (Stalin); M.P.G. Koopmans D.V.M. (Marion); B.L. Haagmans (Bart)

    2016-01-01

    textabstractCoronaviruses (CoVs) able to infect humans emerge through cross-host transmission from animals. There is substantial evidence that the recent Middle East respiratory syndrome (MERS)-CoV outbreak is fueled by zoonotic transmission from dromedary camels. This is largely based on the fact

  17. European network on the determination of site end points for radiologically contaminated land

    International Nuclear Information System (INIS)

    Booth, Peter; Lennon, Chris

    2007-01-01

    Nexia Solutions are currently running a small European network entitled 'European Network on the Determination of Site End Points for Radiologically Contaminated Land (ENDSEP)'. Other network members include NRG (Netherlands), UKAEA (UK), CEA (France), SOGIN (Italy), Wismut (Germany), Saxon State Agency of Environment and Geology (Germany). The network is focused on the technical and socio-economical issues associated with the determination of end points for sites potentially, or actually, impacted by radiological contamination. Such issues will cover: - Those associated with the run up to establishing a site end point; - Those associated with verifying that the end points have been met; and Those associated with post closure. The network's current high level objectives can be summarized as follows: Share experience and best practice in the key issues running up to determining site end points; Gain a better understanding of the potential effects of recent and forthcoming EU legislation; Assess consistency between approaches; Highlight potential gaps within the remit of site end point determination and management; and - Consider the formulation of research projects with a view to sharing time and expense. The programme of work revolves around the following key tasks: - Share information, experience and existing good practice. - Look to determine sustainable approaches to contaminated land site end point management. - Through site visits, gain first hand experience of determining an appropriate end point strategy, and identifying and resolving end point issues. Highlight the key data gaps and consider the development of programmes to either close out these gaps or to build confidence in the approaches taken. Production of position papers on each technical are a highlighting how different countries approach/resolve a specific problem. (authors)

  18. Preliminary analysis of the MER magnetic properties experiment using a computational fluid dynamics model

    DEFF Research Database (Denmark)

    Kinch, K.M.; Merrison, J.P.; Gunnlaugsson, H.P.

    2006-01-01

    Motivated by questions raised by the magnetic properties experiments on the NASA Mars Pathfinder and Mars Exploration Rover (MER) missions, we have studied in detail the capture of airborne magnetic dust by permanent magnets using a computational fluid dynamics (CFD) model supported by laboratory...... simulations. The magnets studied are identical to the capture magnet and filter magnet on MER, though results are more generally applicable. The dust capture process is found to be dependent upon wind speed, dust magnetization, dust grain size and dust grain mass density. Here we develop an understanding...... of how these parameters affect dust capture rates and patterns on the magnets and set bounds for these parameters based on MER data and results from the numerical model. This results in a consistent picture of the dust as containing varying amounts of at least two separate components with different...

  19. Improvement of an enzyme-linked immunosorbent assay for equine herpesvirus type 4 by using a synthetic-peptide 24-mer repeat sequence of glycoprotein G as an antigen

    Science.gov (United States)

    BANNAI, Hiroshi; NEMOTO, Manabu; TSUJIMURA, Koji; YAMANAKA, Takashi; MAEDA, Ken; KONDO, Takashi

    2015-01-01

    To increase the sensitivity of an enzyme-linked immunosorbent assay (ELISA) for equine herpesvirus type 4 (EHV-4) that uses a 12-mer peptide of glycoprotein G (gG4-12-mer: MKNNPIYSEGSL) [4], we used a longer peptide consisting of a 24-mer repeat sequence (gG4-24-mer: MKNNPIYSEGSLMLNVQHDDSIHT) as an antigen. Sera of horses experimentally infected with EHV-4 reacted much more strongly to the gG4-24-mer peptide than to the gG4-12-mer peptide. We used peptide ELISAs to test paired sera from horses naturally infected with EHV-4 (n=40). gG4-24-mer ELISA detected 37 positive samples (92.5%), whereas gG4-12-mer ELISA detected only 28 (70.0%). gG4-24-mer ELISA was much more sensitive than gG4-12-mer ELISA. PMID:26424485

  20. K-mer Content, Correlation, and Position Analysis of Genome DNA Sequences for the Identification of Function and Evolutionary Features

    Directory of Open Access Journals (Sweden)

    Aaron Sievers

    2017-04-01

    Full Text Available In genome analysis, k-mer-based comparison methods have become standard tools. However, even though they are able to deliver reliable results, other algorithms seem to work better in some cases. To improve k-mer-based DNA sequence analysis and comparison, we successfully checked whether adding positional resolution is beneficial for finding and/or comparing interesting organizational structures. A simple but efficient algorithm for extracting and saving local k-mer spectra (frequency distribution of k-mers was developed and used. The results were analyzed by including positional information based on visualizations as genomic maps and by applying basic vector correlation methods. This analysis was concentrated on small word lengths (1 ≤ k ≤ 4 on relatively small viral genomes of Papillomaviridae and Herpesviridae, while also checking its usability for larger sequences, namely human chromosome 2 and the homologous chromosomes (2A, 2B of a chimpanzee. Using this alignment-free analysis, several regions with specific characteristics in Papillomaviridae and Herpesviridae formerly identified by independent, mostly alignment-based methods, were confirmed. Correlations between the k-mer content and several genes in these genomes have been found, showing similarities between classified and unclassified viruses, which may be potentially useful for further taxonomic research. Furthermore, unknown k-mer correlations in the genomes of Human Herpesviruses (HHVs, which are probably of major biological function, are found and described. Using the chromosomes of a chimpanzee and human that are currently known, identities between the species on every analyzed chromosome were reproduced. This demonstrates the feasibility of our approach for large data sets of complex genomes. Based on these results, we suggest k-mer analysis with positional resolution as a method for closing a gap between the effectiveness of alignment-based methods (like NCBI BLAST and the

  1. Mars Exploration Rovers Launch Performance and TCM-1 Maneuver Design

    Science.gov (United States)

    Kangas, Julie A.; Potts, Christopher L.; Raofi, Behzad

    2004-01-01

    The Mars Exploration Rover (MER) project successfully landed two identical rovers on Mars in order to remotely conduct geologic investigations, including characterization of rocks and soils that may hold clues to past water activity. Two landing sites, Gusev crater and Meridiani Planum, were selected out of nearly 200 candidate sites after balancing science returns and flight system engineering and safety. Precise trajectory targeting and control was necessary to achieve the atmospheric entry requirements for the selected landing sites within the flight system constraints. This paper discusses the expected and achieved launch vehicle performance and the impacts of that performance on the first Trajectory Correction Maneuver (TCM-1) while maintaining targeting flexibility in accommodating additional project concerns about landing site safety and possible in-flight retargeting to alternate landing sites.

  2. 21 CFR 177.1040 - Acrylonitrile/styrene copoly-mer.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Acrylonitrile/styrene copoly-mer. 177.1040 Section 177.1040 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN CONSUMPTION (CONTINUED) INDIRECT FOOD ADDITIVES: POLYMERS Substances for Use as Basic Components of Single and Repeated Use Food...

  3. Human Detection and Classification of Landing Sites for Search and Rescue Drones

    NARCIS (Netherlands)

    N. Martins, Felipe; de Groot, Marc; Stokkel, Xeryus; Wiering, Marco

    2016-01-01

    Search and rescue is often time and labour intensive. We present a system to be used in drones to make search and rescue operations more effective. The system uses a drone downward facing camera to detect people and to evaluate potential sites as being safe or not for the drone to land. Histogram of

  4. Vertical view Apollo 16 Descartes landing sites as photographed by Apollo 14

    Science.gov (United States)

    1972-01-01

    An almost vertical view of the Apollo 16 Descartes landing sites as photographed from the Apollo 14 spacecraft. Overlays are provided to point out extravehicular activity (EVA), Lunar Roving Vehicle (LRV) travers routes and the nicknames of features. The Roman numerals indicate the EVA numbers and the Arabic numbers point out stations or traverse stops.

  5. Integrated Weed Control for Land Stewardship at Legacy Management's Rocky Flats Site in Colorado - 13086

    International Nuclear Information System (INIS)

    Nelson, Jody K.

    2013-01-01

    Land stewardship is one of nine sustainability programs in the U.S. Department of Energy's Environmental Management System. Land stewardship includes maintaining and improving ecosystem health. At the Rocky Flats Site near Westminster, Colorado, land stewardship is an integral component of the Office of Legacy Management's post-closure monitoring and management at the site. Nearly 263 hectares (650 acres) were disturbed and re-vegetated during site cleanup and closure operations. Proactive management of revegetation areas is critical to the successful reestablishment of native grasslands, wetlands, and riparian communities. The undisturbed native plant communities that occur at the site also require active management to maintain the high-quality wetlands and other habitats that are home to numerous species of birds and other wildlife such as elk and deer, rare plant communities, and the federally listed threatened Preble's meadow jumping mouse. Over the past several decades, an increase of Noxious weeds has impacted much of Colorado's Front Range. As a result, weed control is a key component of the land stewardship program at Rocky Flats. Thirty-three species of state-listed Noxious weeds are known to occur in the Central and Peripheral Operable Units at Rocky Flats, along with another five species that are considered invasive at the site. Early detection and rapid response to control new invasive species is crucial to the program. An integrated weed control/vegetation management approach is key to maintaining healthy, sustainable plant communities that are able to resist Noxious weed invasions. Weed mapping, field surveys, and field-staff training sessions (to learn how to identify new potential problem species) are conducted to help detect and prevent new weed problems. The integrated approach at Rocky Flats includes administrative and cultural techniques (prevention), mechanical controls, biological controls, and chemical controls. Several species of biocontrol

  6. Updating the Geologic Maps of the Apollo 15, 16, and 17 Landing Sites

    Science.gov (United States)

    Garry, W. B.; Mest, S. C.; Yingst, R. A.; Ostrach, L. R.; Petro, N. E.; Cohen, B. A.

    2018-06-01

    Our team is funded through NASA's Planetary Data Archiving, Restoration, and Tools (PDART) program to produce two new USGS Special Investigation Maps (SIM) for the Apollo 15, 16, and 17 missions: a regional map (1:200K) and a landing-site map (1:24K).

  7. Land use and demography survey for a large superfund site

    International Nuclear Information System (INIS)

    Hattemer-Frey, H.A.; Quinlan, R.E.; Krieger, G.R.; Lau, V.

    1994-01-01

    Inconsistencies in the exposure assessment process often arise when risk assessors are forced to make assumptions about the frequency and duration of exposures in the absence of site-specific data. EPA encourages the collection of site-specific data so that risks can be more accurately assessed on a case-by-case basis. Typically, estimates of exposure frequency and duration represent the largest source of uncertainty for non-food related exposure pathways, while the largest source of uncertainty for foodchain pathways stems primarily from estimating the fraction ingested that originated from the affected area. A Land Use and Demography Survey was conducted to obtain site-specific information on: (1) the amount of time individuals spend indoors, outdoors, and on or near affected areas; (2) recreational use of surface water bodies on-site; (3) the percentage of food items consumed that were raised or produced locally; and (4) other behavioral patterns and activities that could influence their exposure to site-related chemicals. More than 300 households were randomly selected and the residents personally interviewed. A wide variety of individuals ranging from children to elderly residents with vastly different recreational, behavioral, and consumption patterns were interviewed. This paper discusses the survey results in relation to EPA standard default exposure assumptions

  8. Influenza not MERS CoV among returning Hajj and Umrah pilgrims with respiratory illness, Kashmir, north India, 2014-15.

    Science.gov (United States)

    Koul, Parvaiz A; Mir, Hyder; Saha, Siddhartha; Chadha, Mandeep S; Potdar, Varsha; Widdowson, Marc-Alain; Lal, Renu B; Krishnan, Anand

    The increasing reports of Middle East Respiratory Syndrome (MERS) caused by MERS coronavirus (MERS-CoV) from many countries emphasize its importance for international travel. Muslim pilgrimages of Hajj and Umrah involve mass gatherings of international travellers. We set out to assess the presence of influenza and MERS-CoV in Hajj/Umrah returnees with acute respiratory infection. . Disembarking passengers (n = 8753) from Saudi Arabia (October 2014 to April 2015) were interviewed for the presence of respiratory symptoms; 977 (11%) reported symptoms and 300 (age 26-90, median 60 years; 140 male) consented to participate in the study. After recording clinical and demographic data, twin swabs (nasopharyngeal and throat) were collected from each participant, pooled in viral transport media and tested by real-time RT PCR for MERS-CoV and influenza A and B viruses and their subtypes. The participants had symptoms of 1-15 days (median 5d); cough (90%) and nasal discharge (86%) being the commonest. None of the 300 participants tested positive for MERS-CoV; however, 33 (11%) tested positive for influenza viruses (A/H3N2 = 13, A/H1N1pdm09 = 9 and B/Yamagata = 11). Eighteen patients received oseltamivir. No hospitalizations were needed and all had uneventful recovery. Despite a high prevalence of acute respiratory symptoms, MERS coV was not seen in returning pilgrims from Hajj and Umrah. However detection of flu emphasises preventive strategies like vaccination. Copyright © 2016 Elsevier Ltd. All rights reserved.

  9. Identification of residues on human receptor DPP4 critical for MERS-CoV binding and entry

    Energy Technology Data Exchange (ETDEWEB)

    Song, Wenfei [Ministry of Education Key Laboratory of Protein Science, Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing 100084 (China); Wang, Ying [Comprehensive AIDS Research Center, Research Center for Public Health, School of Medicine, Tsinghua University, Beijing 100084 (China); Wang, Nianshuang; Wang, Dongli [Ministry of Education Key Laboratory of Protein Science, Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing 100084 (China); Guo, Jianying; Fu, Lili [Comprehensive AIDS Research Center, Research Center for Public Health, School of Medicine, Tsinghua University, Beijing 100084 (China); Shi, Xuanling, E-mail: shixuanlingsk@tsinghua.edu.cn [Comprehensive AIDS Research Center, Research Center for Public Health, School of Medicine, Tsinghua University, Beijing 100084 (China)

    2014-12-15

    Middle East respiratory syndrome coronavirus (MERS-CoV) infects host cells through binding the receptor binding domain (RBD) on its spike glycoprotein to human receptor dipeptidyl peptidase 4 (hDPP4). Here, we report identification of critical residues on hDPP4 for RBD binding and virus entry through analysis of a panel of hDPP4 mutants. Based on the RBD–hDPP4 crystal structure we reported, the mutated residues were located at the interface between RBD and hDPP4, which potentially changed the polarity, hydrophobic or hydrophilic properties of hDPP4, thereby interfering or disrupting their interaction with RBD. Using surface plasmon resonance (SPR) binding analysis and pseudovirus infection assay, we showed that several residues in hDPP4–RBD binding interface were important on hDPP4–RBD binding and viral entry. These results provide atomic insights into the features of interactions between hDPP4 and MERS-CoV RBD, and also provide potential explanation for cellular and species tropism of MERS-CoV infection. - Highlights: • It has been demonstrated that MERS-CoV infects host cells through binding its envelope spike (S) glycoprotein to the host cellular receptor dipeptidyl peptidase 4 (DPP4). • To identify the critical residues on hDPP4 for RBD binding and virus entry, we constructed a panel of hDPP4 mutants based on structure-guided mutagenesis. • Using surface plasmon resonance (SPR) binding analysis and pseudovirus infection assay, we showed that several residues on hDPP4 had significant impacts on virus/receptor interactions and viral entry. • Our study has provided new insights into the features of interactions between hDPP4 and MERS-CoV RBD, and provides potential explanation for cellular and species tropism of MERS-CoV infection.

  10. Characterization of novel monoclonal antibodies against the MERS-coronavirus spike protein and their application in species-independent antibody detection by competitive ELISA.

    Science.gov (United States)

    Fukushi, Shuetsu; Fukuma, Aiko; Kurosu, Takeshi; Watanabe, Shumpei; Shimojima, Masayuki; Shirato, Kazuya; Iwata-Yoshikawa, Naoko; Nagata, Noriyo; Ohnishi, Kazuo; Ato, Manabu; Melaku, Simenew Keskes; Sentsui, Hiroshi; Saijo, Masayuki

    2018-01-01

    Since discovering the Middle East respiratory syndrome coronavirus (MERS-CoV) as a causative agent of severe respiratory illness in the Middle East in 2012, serological testing has been conducted to assess antibody responses in patients and to investigate the zoonotic reservoir of the virus. Although the virus neutralization test is the gold standard assay for MERS diagnosis and for investigating the zoonotic reservoir, it uses live virus and so must be performed in high containment laboratories. Competitive ELISA (cELISA), in which a labeled monoclonal antibody (MAb) competes with test serum antibodies for target epitopes, may be a suitable alternative because it detects antibodies in a species-independent manner. In this study, novel MAbs against the spike protein of MERS-CoV were produced and characterized. One of these MAbs was used to develop a cELISA. The cELISA detected MERS-CoV-specific antibodies in sera from MERS-CoV-infected rats and rabbits immunized with the spike protein of MERS-CoV. The MAb-based cELISA was validated using sera from Ethiopian dromedary camels. Relative to the neutralization test, the cELISA detected MERS-CoV-specific antibodies in 66 Ethiopian dromedary camels with a sensitivity and specificity of 98% and 100%, respectively. The cELISA and neutralization test results correlated well (Pearson's correlation coefficients=0.71-0.76, depending on the cELISA serum dilution). This cELISA may be useful for MERS epidemiological investigations on MERS-CoV infection. Copyright © 2017 Elsevier B.V. All rights reserved.

  11. Physiological and ecological consequences of sleeping-site selection by the Galapagos land iguana (Conolophus pallidus)

    Energy Technology Data Exchange (ETDEWEB)

    Christian, K.A.; Tracy, C.R.

    1984-01-01

    Field observations and biophysical models were combined to analyze sleeping-site selection by Galapagos land iguanas (Conolophus pallidus). Iguanas slept in different kinds of sleeping sites during different seasons. In the coolest season (garua), adult land iguanas were found in sleeping sites that were warmer than the coolest sites available. This may be because the garua season (cool, overcast, and foggy) is a time when environmental conditions mitigate against rapid warm-up in the mornings, so lizards may regulate nighttime body temperatures so that it is easier to warm up to preferred daytime body temperatures. In the warmest season, adult iguanas were found in the coolest sleeping sites available. This observation is consistent with hypotheses of voluntary hypothermia, which can be advantageous in energy conservation and in avoiding detrimental effects associated with maintenance of constant body temperatures throughout the day and night. Juvenile iguanas were found sleeping in rock crevices regardless of the ambient thermal environments. Such sites are likely to be important as refugia for this life stage, which, unlike the adult stage, is vulnerable to predation. It was concluded that selection of sleeping sites is a process that may help in avoidance of predation, optimization of body temperature at the end of the sleeping period, and reduction of metabolic costs during sleeping. The importance of some of these factors may change with the thermal milieu (e.g., season).

  12. Diel activity and preferred landing sites in Culicoides biting midges attacking Fjord horses

    NARCIS (Netherlands)

    Elbers, A.R.W.; Heuvel, van den S.J.; Meiswinkel, R.

    2016-01-01

    In the summer of 2014, in the central part of The Netherlands, Culicoides spp. (Diptera: Ceratopogonidae) attack rates, biting rates, and preferred landing sites were determined for a pair of Fjord horses maintained permanently at pasture in an area devoid of cattle. Eleven body regions of the

  13. Soil microbial diversity, site conditions, shelter forest land, saline water drip-irrigation, drift desert.

    Science.gov (United States)

    Jin, Zhengzhong; Lei, Jiaqiang; Li, Shengyu; Xu, Xinwen

    2013-10-01

    Soil microbes in forest land are crucial to soil development in extreme areas. In this study, methods of conventional culture, PLFA and PCR-DGGE were utilized to analyze soil microbial quantity, fatty acids and microbial DNA segments of soils subjected to different site conditions in the Tarim Desert Highway forest land. The main results were as follows: the soil microbial amount, diversity indexes of fatty acid and DNA segment differed significantly among sites with different conditions (F 84%), followed by actinomycetes and then fungi (<0.05%). Vertical differences in the soil microbial diversity were insignificant at 0-35 cm. Correlation analysis indicated that the forest trees grew better as the soil microbial diversity index increased. Therefore, construction of the Tarim Desert Highway shelter-forest promoted soil biological development; however, for enhancing sand control efficiency and promoting sand development, we should consider the effects of site condition in the construction and regeneration of shelter-forest ecological projects. © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  14. Occurrence of the Middle East Respiratory Syndrome Coronavirus (MERS-CoV across the Gulf Corporation Council countries: Four years update.

    Directory of Open Access Journals (Sweden)

    Mahmoud Aly

    Full Text Available The emergence of the Middle East Respiratory Syndrome Coronavirus (MERS-CoV infections has become a global issue of dire concerns. MERS-CoV infections have been identified in many countries all over the world whereas high level occurrences have been documented in the Middle East and Korea. MERS-CoV is mainly spreading across the geographical region of the Middle East, especially in the Arabian Peninsula, while some imported sporadic cases were reported from the Europe, North America, Africa, and lately Asia. The prevalence of MERS-CoV infections across the Gulf Corporation Council (GCC countries still remains unclear. Therefore, the objective of the current study was to report the prevalence of MERS-CoV in the GCC countries and to also elucidate on its demographics in the Arabian Peninsula. To date, the World Health Organization (WHO has reported 1,797 laboratory-confirmed cases of MERS-CoV infection since June 2012, involving 687 deaths in 27 different countries worldwide. Within a time span of 4 years from June 2012 to July 2016, we collect samples form MERS-CoV infected individuals from National Guard Hospital, Riyadh, and Ministry of health Saudi Arabia and other GCC countries. Our data comprise a total of 1550 cases (67.1% male and 32.9% female. The age-specific prevalence and distribution of MERS-CoV was as follow: <20 yrs (36 cases: 3.28%, 20-39 yrs (331 cases: 30.15%, 40-59 yrs (314 cases: 28.60%, and the highest-risk elderly group aged ≥60 yrs (417 cases: 37.98%. The case distribution among GCC countries was as follows: Saudi Arabia (1441 cases: 93%, Kuwait (4 cases: 0.3%, Bahrain (1 case: 0.1%, Oman (8 cases: 0.5%, Qatar (16 cases: 1.0%, and United Arab Emirates (80 cases: 5.2%. Thus, MERS-CoV was found to be more prevalent in Saudi Arabia especially in Riyadh, where 756 cases (52.4% were the worst hit area of the country identified, followed by the western region Makkah where 298 cases (20.6% were recorded. This prevalence update

  15. Inorganic analyses of Martian surface samples at the Viking landing sites

    Science.gov (United States)

    Clark, B. C.; Castro, A. J.; Rowe, C. D.; Baird, A. K.; Evans, P. H.; Rose, H. J., Jr.; Toulmin, P., III; Keil, K.; Kelliher, W. C.

    1976-01-01

    Elemental analyses of fines in the Martian regolith at two widely separated landing sites, Chryse Planitia and Utopia Planitia, produced remarkably similar results. At both sites, the uppermost regolith contains abundant Si and Fe, with significant concentrations of Mg, Al, S, Ca, and Ti. The S concentration is one to two orders of magnitude higher, and K (less than 0.25% by weight) is at least 5 times lower than the average for earth's crust. The trace elements Sr, Y, and possibly Zr have been detected at concentrations near or below 100 parts per million. Pebble-sized fragments sampled at Chryse contain more S than the bulk fines and are thought to be pieces of a sulfate-cemented duricrust.

  16. Multi-objective decisions in land-use planning involving chemical sites

    DEFF Research Database (Denmark)

    Rasmussen, B.; Bertelsen, I.; Burchard, V.

    1999-01-01

    A methodology for land-use planning involving chemical sites has been developed for making decisions in local and regional administrations. The methodology structures the planning process in seven steps, where one can loop through the steps several times.Essential parts of the methodology...... are the specification of objectives and the development of alternatives where the objectives sets the frame in which the alternatives are assessed and compared. The list of objectives includes the following items: safetyand accidents, public distortion and health, environmental impact, cultural and natural heritage...

  17. Differential expression of the MERS-coronavirus receptor in the upper respiratory tract of humans and dromedary camels

    NARCIS (Netherlands)

    Widagdo, W; Raj, V Stalin; Schipper, Debby; Kolijn, Kimberley; van Leenders, Geert J L H; Bosch, Berend J; Bensaid, Albert; Segalés, Joaquim; Baumgärtner, Wolfgang; Osterhaus, Albert D M E; Koopmans, Marion P; van den Brand, Judith M A; Haagmans, Bart L

    Middle East respiratory syndrome coronavirus (MERS-CoV) is not efficiently transmitted between humans, but it is highly prevalent in dromedary camels. Here we report that the MERS-CoV receptor - dipeptidyl peptidase 4 (DPP4) - is expressed in the upper respiratory tract epithelium of camels but not

  18. Status of corrective measures technology for shallow land burial at arid sites

    International Nuclear Information System (INIS)

    Abeele, W.V.; Nyhan, J.W.; Drennon, B.J.; Lopez, E.A.; Herrera, W.J.; Langhorst, G.J.

    1985-01-01

    The field research program involving corrective measure technologies for arid shallow land burial sites is described. Soil erosion and infiltration of water into a simulated trench cap with various surface treatments was measured and compared with similar data from agricultural systems across the United States. Report of field testing of biointrusion barriers continues at a closed-out waste disposal site at Los Alamos. Final results of an experiment designed to determine the effects of subsidence on the performance of a cobble-gravel biobarrier system are reported, as well as the results of hydrologic modeling activities involving biobarrier systems. 11 refs., 10 figs

  19. Potential for effects of land contamination on human health. 2. The case of waste disposal sites.

    Science.gov (United States)

    Kah, Melanie; Levy, Len; Brown, Colin

    2012-01-01

    This review of the epidemiological literature shows that evidence for negative impacts of land contaminated by waste disposal on human health is limited. However, the potential for health impacts cannot be dismissed. The link between residence close to hazardous waste disposal sites and heightened levels of stress and anxiety is relatively well established. However, studies on self-reported outcomes generally suffer from interpretational problems, as subjective symptoms may be due to increased perception and recall. Several recent multiple-site studies support a plausible linkage between residence near waste disposal sites and reproductive effects (including congenital anomalies and low birth weight). There is some conflict in the literature investigating links between land contamination and cancers; the evidence for and against a link is equally balanced and is insufficient to make causal inferences. These are difficult to establish because of lack of data on individual exposures, and other socioeconomic and lifestyle factors that may confound a relationship with area of residence. There is no consistently occurring risk for any specific tumor across multiple studies on sites expected to contain similar contaminants. Further insights on health effects of land contamination are likely to be gained from studies that consider exposure pathways and biomarkers of exposure and effect, similar to those deployed with some success in investigating impacts of cadmium on human health.

  20. 1995 Report on Hanford site land disposal restrictions for mixed waste

    International Nuclear Information System (INIS)

    Black, D.G.

    1995-04-01

    This report was submitted to meet the requirements of Hanford Federal Facility Agreement and Consent Order Milestone M-26-01E. This milestone requires the preparation of an annual report that covers characterization, treatment, storage, minimization, and other aspects of land disposal restricted mixed waste at the Hanford Site. The U.S. Department of Energy, its predecessors, and contractors at the Hanford Site were involved in the production and purification of nuclear defense materials from the early 1940s to the late 1980s. These production activities have generated large quantities of liquid and solid radioactive mixed waste. This waste is subject to regulation under authority of both the Resource Conservation and Recovery Act of 1976 and Atomic Energy Act of 1954. This report covers mixed waste only. The Washington State Department of Ecology, U.S. Environmental Protection Agency, and U.S. Department of Energy have entered into an agreement, the Hanford Federal Facility Agreement and Consent Order (commonly referred to as the Tri-Party Agreement) to bring the Hanford Site operations into compliance with dangerous waste regulations. The Tri-Party Agreement required development of the original land disposal restrictions (LDRs) plan and its annual updates to comply with LDR requirements for radioactive mixed waste. This report is the fifth update of the plan first issued in 1990. Tri-Party Agreement negotiations completed in 1993 and approved in January 1994 changed and added many new milestones. Most of the changes were related to the Tank Waste Remediation System and these changes are incorporated into this report

  1. 1995 Report on Hanford site land disposal restrictions for mixed waste

    Energy Technology Data Exchange (ETDEWEB)

    Black, D.G.

    1995-04-01

    This report was submitted to meet the requirements of Hanford Federal Facility Agreement and Consent Order Milestone M-26-01E. This milestone requires the preparation of an annual report that covers characterization, treatment, storage, minimization, and other aspects of land disposal restricted mixed waste at the Hanford Site. The U.S. Department of Energy, its predecessors, and contractors at the Hanford Site were involved in the production and purification of nuclear defense materials from the early 1940s to the late 1980s. These production activities have generated large quantities of liquid and solid radioactive mixed waste. This waste is subject to regulation under authority of both the Resource Conservation and Recovery Act of 1976 and Atomic Energy Act of 1954. This report covers mixed waste only. The Washington State Department of Ecology, U.S. Environmental Protection Agency, and U.S. Department of Energy have entered into an agreement, the Hanford Federal Facility Agreement and Consent Order (commonly referred to as the Tri-Party Agreement) to bring the Hanford Site operations into compliance with dangerous waste regulations. The Tri-Party Agreement required development of the original land disposal restrictions (LDRs) plan and its annual updates to comply with LDR requirements for radioactive mixed waste. This report is the fifth update of the plan first issued in 1990. Tri-Party Agreement negotiations completed in 1993 and approved in January 1994 changed and added many new milestones. Most of the changes were related to the Tank Waste Remediation System and these changes are incorporated into this report.

  2. MER 1 MARS NAVCAM 3 RADIOMETRIC RDR SCI V1.0

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set contains radiometrically calibrated MER-1 Navcam data. The calibration has removed bias, dark current, and flatfield effects from the raw Navcam data,...

  3. MERS-CoV at the Animal-Human interface: inputs on exposure pathways from an Expert-Opinion elicitation

    Directory of Open Access Journals (Sweden)

    Anna Funk

    2016-10-01

    Full Text Available Nearly four years after the first report of the emergence of Middle-East respiratory syndrome Coronavirus (MERS-CoV and nearly 1800 human cases later, the ecology of MERS-CoV, its epidemiology, and risk factors of MERS-CoV transmission between camels are poorly understood. Knowledge about the pathways and mechanisms of transmission from animals to humans is limited; as of yet, transmission risks have not been quantified. Moreover the divergent sanitary situations and exposures to animals among populations in the Arabian Peninsula, where human primary cases appear to dominate, vs. other regions in the Middle East and Africa, with no reported human clinical cases and where the virus has been detected only in dromedaries, represents huge scientific and health challenges. Here, we have used expert opinion elicitation in order to obtain ideas on relative importance of MERS-CoV risk factors and estimates of transmission risks from various types of contact between humans and dromedaries. Fourteen (14 experts with diverse and extensive experience in MERS-CoV relevant fields were enrolled and completed an online questionnaire that examined pathways based on several scenarios e.g. camels-camels, camels-human, bats/other species to camels/humans and the role of diverse biological substances (milk, urine etc. and potential fomites.Experts believed that dromedary camels play the largest role in MERS-CoV infection of other dromedaries; however, they also indicated a significant influence of the season (i.e. calving or weaning periods on transmission risk. All experts thought that MERS-CoV infected dromedaries and asymptomatic humans play the most important role in infection of humans, with bats and other species presenting a possible, but yet undefined, risk. Direct and indirect contact of humans with dromedary camels were identified as the most risky types of contact, when compared to consumption of various camel products, with estimated 'most

  4. The Role Of Land Use In Environmental Decision Making At Three DOE Mega-Cleanup Sites, Fernald, Rocky Flats, and Mound

    International Nuclear Information System (INIS)

    Jewett, M.A.

    2011-01-01

    This paper explores the role that future land use decisions have played in the establishment of cost-effective cleanup objectives and the setting of environmental media cleanup levels for the three major U.S. Department of Energy (DOE) sites for which cleanup has now been successfully completed: the Rocky Flats, Mound, and Fernald Closure Sites. At each site, there are distinct consensus-building histories throughout the following four phases: (1) the facility shut-down and site investigation phase, which took place at the completion of their Cold War nuclear-material production missions; (2) the decision-making phase, whereby stakeholder and regulatory-agency consensus was achieved for the future land-use-based environmental decisions confronting the sites; (3) the remedy selection phase, whereby appropriate remedial actions were identified to achieve the future land-use-based decisions; and (4) the implementation phase, whereby the selected remedial actions for these high-profile sites were implemented and successfully closed out. At each of the three projects, there were strained relationships and distrust between the local community and the DOE as a result of site contamination and potential health effects to the workers and local residents. To engage citizens and interested stakeholder groups - particularly in the role of final land use in the decision-making process, the site management teams at each respective site developed new public-participation strategies to open stakeholder communication channels with site leadership, technical staff, and the regulatory agencies. This action proved invaluable to the success of the projects and reaching consensus on appropriate levels of cleanup. With the implementation of the cleanup remedies now complete, each of the three DOE sites have become models for future environmental-remediation projects and associated decision making.

  5. The disposal of solid radioactive wastes to land sites in the UK

    International Nuclear Information System (INIS)

    Ginniff, M.E.; Phillipson, D.L.

    1984-01-01

    Solid radioactive waste management by land disposal, using a strategy laid down by the government, is discussed. Waste disposal at Drigg, and the proposals for the two preferred sites at Elstow (shallow burial) and Billingham (deep burial) are outlined. Nuclear Industry Radioactive Waste Executive (NIREX); safety; public acceptance; and the role of the private sector; are also described. (U.K.)

  6. Endogenous GAS6 and Mer receptor signaling regulate prostate cancer stem cells in bone marrow.

    Science.gov (United States)

    Jung, Younghun; Decker, Ann M; Wang, Jingcheng; Lee, Eunsohl; Kana, Lulia A; Yumoto, Kenji; Cackowski, Frank C; Rhee, James; Carmeliet, Peter; Buttitta, Laura; Morgan, Todd M; Taichman, Russell S

    2016-05-03

    GAS6 and its receptors (Tryo 3, Axl, Mer or "TAM") are known to play a role in regulating tumor progression in a number of settings. Previously we have demonstrated that GAS6 signaling regulates invasion, proliferation, chemotherapy-induced apoptosis of prostate cancer (PCa) cells. We have also demonstrated that GAS6 secreted from osteoblasts in the bone marrow environment plays a critical role in establishing prostate tumor cell dormancy. Here we investigated the role that endogenous GAS6 and Mer receptor signaling plays in establishing prostate cancer stem cells in the bone marrow microenvironment.We first observed that high levels of endogenous GAS6 are expressed by disseminated tumor cells (DTCs) in the bone marrow, whereas relatively low levels of endogenous GAS6 are expressed in PCa tumors grown in a s.c. Interestingly, elevated levels of endogenous GAS6 were identified in putative cancer stem cells (CSCs, CD133+/CD44+) compared to non-CSCs (CD133-/CD44-) isolated from PCa/osteoblast cocultures in vitro and in DTCs isolated from the bone marrow 24 hours after intracardiac injection. Moreover, we found that endogenous GAS6 expression is associated with Mer receptor expression in growth arrested (G1) PCa cells, which correlates with the increase of the CSC populations. Importantly, we found that overexpression of GAS6 activates phosphorylation of Mer receptor signaling and subsequent induction of the CSC phenotype in vitro and in vivo.Together these data suggest that endogenous GAS6 and Mer receptor signaling contribute to the establishment of PCa CSCs in the bone marrow microenvironment, which may have important implications for targeting metastatic disease.

  7. Landing Site Studies Using High Resolution MGS Crater Counts and Phobos-2 Termoskan Data

    Science.gov (United States)

    Hartmann, Willian K.; Berman, Daniel C.; Betts, Bruce H.

    1999-06-01

    We have examined a number of potential landing sites to study effects associated with impact crater populations. We used Mars Global Surveyor high resolution MOC images, and emphasized "ground truth" by calibrating with the MOC images of Viking 1 and Pathfinder sites. An interesting result is that most of Mars (all surfaces with model ages older than 100 My) have small crater populations in saturation equilibrium below diameters D approx. = 60 meters (and down to the smallest resolvable, countable sizes, approx. = 15 m). This may have consequences for preservation of surface bedrock exposures accessible to rovers. In the lunar maria, a similar saturation equilibrium is reached for crater diameters below about 300 meters, and this has produced a regolith depth of about 10-20 meters in those areas. Assuming linear scaling, we infer that saturation at D approx. = 60 m would produce gardening and Martian regolith, or fragmental layers, about 2 to 4 meters deep over all but extremely young surfaces (such as the very fresh thin surface flows in southern Elysium Planitia, which have model ages around 10 My or less). This result may explain the global production of ubiquitous dust and fragmental material on Mars. Removal of fines may leave the boulders that have been seen at all three of the first landing sites. Accumulation of the fines elsewhere produces dunes. Due to these effects, it may be difficult to set down rovers in areas where bedrock is well preserved at depths of centimeters, unless we find cliff sides or areas of deflation where wind has exposed clean surfaces (among residual boulders?) We have also surveyed the PHOBOS 2 Termoskan data to look for regions of thermal anomalies that might produce interesting landing sites. For landing site selection, two of the more interesting types of features are thermally distinct ejecta blankets and thermally distinct channels and valleys. Martian "thermal features" such as these that correlate closely with nonaeolian

  8. Developing methodology for description of biosphere evolution at Olkiluoto disposal site utilising forest studies at other land uplift sites

    International Nuclear Information System (INIS)

    Ikondn, A.T.K.; Afo, L.

    2004-01-01

    In Finland, Olkiluoto Island has been selected as the site for final disposal of spent nuclear fuel, in addition to the existing repository for low and intermediate level waste. When creating biosphere models for safety assessments, local main features and processes need to be taken into account. A special characteristic of the site, as well as the coastal area of the Gulf of Bothnia in general, is the land uplift (6-9 mm/a). This continuously exposes new land to soil-formation processes and provides surfaces for colonization by plant communities. The forest vegetation succession on stony, fine-grained till soils starts from deciduous shoreline vegetation and ends in almost pure Norway spruce forests. This has enabled to study ecological and microbiological processes in soils and forests of different developmental stages, to monitor forest condition and the factors affecting it in sites locating close to each other. It has also made possible gradient studies of the succession of boreal mire ecosystems without a need to wait thousands of years. Applying a methodology described in the full paper, a descriptive model on the evolution of the biosphere will be established to indicate possible ecosystem distributions and main characteristics on the area on the basis of above-mentioned studies carried out by Finnish Forest Research Institute, and of results of the site investigations at Olkiluoto. In future, the evolution description will be used as a basis for selection of appropriate ecosystem modules and parameter values in the subsequent coupled assessment model systems. (author)

  9. Reclamation of oil and gas well sites on privately-owned land in Alberta: An evaluation of benefits and costs

    International Nuclear Information System (INIS)

    Bates, L.A.

    1994-01-01

    In Alberta, ca 24,000 oil/gas well sites will be abandoned over the next 10 years. There is concern that the expense to reclaim the surface lands at these sites to current standards represents a substantial opportunity cost to industry and the provincial economy. The economic costs and benefits associated with regulation of such reclamation activity are examined and the impacts of surface access regulations on the reclamation process are discussed. Cost benefit analysis is not easily applied to environmental regulation where some extra-market benefits and costs are intangible and/or unmeasurable. Although this qualifies the results, it appears that the costs of wellsite reclamation exceed the benefits. Costs are defined as reclamation expenses; benefits are defined as the real estate value of the land, or the net present value of agricultural land rentals. An effort has been made to provide a proxy for the extra-market value of the land to the landowner. The continuation of full surface access compensation for nonproducing wells can result in negative incentive effects that reduce allocative efficiency of reclamation regulation. Reclamation costs are correlated with well age and surface access payments, but not with agricultural land use or geographic region. This suggests that reclamation standards designed to reclaim well sites to the same productive capacity as site-adjacent land is not driving reclamation effort. Rather, landowners have negotiated substantial annual surface lease payments and may also be demanding greater reclamation effort, either to maximize compensation due to higher expectations. Methods of reducing these negative incentive effects to better achieve reclamation goals are suggested. 49 refs., 9 figs., 17 tabs

  10. Recreational rates and future land-use preferences for four Department of Energy sites: consistency despite demographic and geographical differences

    International Nuclear Information System (INIS)

    Burger, Joanna

    2004-01-01

    The management of ecosystems has been improved by both a public understanding of ecosystem structure and function and by managers' understanding of public perceptions and attitudes. This is especially true for contaminated lands where there are a variety of remediation, restoration, and future land-use decisions to be made. This paper synthesizes several surveys from four US Department of Energy (DOE) sites in the states of South Carolina, Idaho, Nevada, and New York. Although ethnic composition varied among the sites, age and gender did not. The percentage of the study population engaged in hunting ranged from 30% to 41% and that in fishing ranged from 55% to 74%. Average hunting rates ranged from 9 (New York) to 15 (South Carolina) days/year; average fishing rates ranged from 12 (New Mexico) to 38 (New York) days a year. Despite the demographic and recreational rate differences, there was remarkable agreement about future land uses. Maintaining these DOE sites as National Environmental Research Parks and using them for nonconsumptive recreation rated the highest. The lowest rated future land uses were current and additional nuclear waste storage and the building of homes and factories. People who participated in a recreational activity rated those future land uses higher than nonusers. While these data on recreational rates can be used to assess the potential risk to people using contaminated sites and to aid in setting clean-up standards based on potential risk, the information on land-use preferences can be used by managers to determine future use and to plan for such use. This information is particularly relevant to the Department of Energy's 'Risk-based End State Vision'

  11. 1994 Characterization report for the state approved land disposal site

    International Nuclear Information System (INIS)

    Swanson, L.C.

    1994-01-01

    This report summarizes the results of characterization activities at the proposed state-approved land disposal site (SALDS); it updates the original characterization report with studies completed since the first characterization report. The initial characterization report discusses studies from two characterization boreholes, 699-48-77A and 699-48-77B. This revision includes data from implementation of the Groundwater Monitoring Plan and the Aquifer Test Plan. The primary sources of data are two down-gradient groundwater monitoring wells, 699-48-77C and 699-48-77D, and aquifer testing of three zones in well 699-48-77C. The SALDS is located on the Hanford Site, approximately 183 m north of the 200 West Area on the north side of the 200 Areas Plateau. The SALDS is an infiltration basin proposed for disposal of treated effluents from the 200 Areas of Hanford

  12. Habitat reclamation plan to mitigate for the loss of habitat due to oil and gas production activities under maximum efficient rate, Naval Petroleum Reserve No. 1, Kern County, California

    International Nuclear Information System (INIS)

    Anderson, D.C.

    1994-11-01

    Activities associated with oil and gas development under the Maximum Efficiency Rate (MER) from 1975 to 2025 will disturb approximately 3,354 acres. Based on 1976 aerial photographs and using a dot grid methodology, the amount of land disturbed prior to MER is estimated to be 3,603 acres. Disturbances on Naval Petroleum Reserve No. 1 (NPR-1) were mapped using 1988 aerial photography and a geographical information system. A total of 6,079 acres were classified as disturbed as of June, 1988. The overall objective of this document is to provide specific information relating to the on-site habitat restoration program at NPRC. The specific objectives, which relate to the terms and conditions that must be met by DOE as a means of protecting the San Joaquin kit fox from incidental take are to: (1) determine the amount and location of disturbed lands on NPR-1 and the number of acres disturbed as a result of MER activities, (2) develop a long term (10 year) program to restore an equivalent on-site acres to that lost from prior project-related actions, and (3) examine alternative means to offset kit fox habitat loss

  13. Knowledge, Attitudes and Behaviours of Healthcare Workers in the Kingdom of Saudi Arabia to MERS Coronavirus and Other Emerging Infectious Diseases

    Directory of Open Access Journals (Sweden)

    Abdullah J. Alsahafi

    2016-12-01

    Full Text Available Background: The Kingdom of Saudi Arabia has experienced a prolonged outbreak of Middle East Respiratory Syndrome (MERS coronavirus since 2012. Healthcare workers (HCWs form a significant risk group for infection. Objectives: The aim of this survey was to assess the knowledge, attitudes, infection control practices and educational needs of HCWs in the Kingdom of Saudi Arabia to MERS coronavirus and other emerging infectious diseases. Methods: 1500 of HCWs from Saudi Ministry of Health were invited to fill a questionnaire developed to cover the survey objectives from 9 September 2015 to 8 November 2015. The response rate was about 81%. Descriptive statistics was used to summarise the responses. Results: 1216 HCWs were included in this survey. A total of 56.5% were nurses and 22% were physicians. The most common sources of MERS-coronavirus (MERS-CoV information were the Ministry of Health (MOH memo (74.3%. Only (47.6% of the physicians, (30.4% of the nurses and (29.9% of the other HCWs were aware that asymptomatic MERS-CoV was described. Around half of respondents who having been investigated for MERS-CoV reported that their work performance decreased while they have suspicion of having MERS-CoV and almost two thirds reported having psychological problems during this period. Almost two thirds of the HCWs (61.2% reported anxiety about contracting MERS-CoV from patients. Conclusions: The knowledge about emerging infectious diseases was poor and there is need for further education and training programs particularly in the use of personal protective equipment, isolation and infection control measures. The self-reported infection control practices were sub-optimal and seem to be overestimated.

  14. Adaptive evolution influences the infectious dose of MERS-CoV necessary to achieve severe respiratory disease.

    Science.gov (United States)

    Douglas, Madeline G; Kocher, Jacob F; Scobey, Trevor; Baric, Ralph S; Cockrell, Adam S

    2018-04-01

    We recently established a mouse model (288-330 +/+ ) that developed acute respiratory disease resembling human pathology following infection with a high dose (5 × 10 6 PFU) of mouse-adapted MERS-CoV (icMERSma1). Although this high dose conferred fatal respiratory disease in mice, achieving similar pathology at lower viral doses may more closely reflect naturally acquired infections. Through continued adaptive evolution of icMERSma1 we generated a novel mouse-adapted MERS-CoV (maM35c4) capable of achieving severe respiratory disease at doses between 10 3 and 10 5 PFU. Novel mutations were identified in the maM35c4 genome that may be responsible for eliciting etiologies of acute respiratory distress syndrome at 10-1000 fold lower viral doses. Importantly, comparative genetics of the two mouse-adapted MERS strains allowed us to identify specific mutations that remained fixed through an additional 20 cycles of adaptive evolution. Our data indicate that the extent of MERS-CoV adaptation determines the minimal infectious dose required to achieve severe respiratory disease. Copyright © 2017 Elsevier Inc. All rights reserved.

  15. MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape

    Energy Technology Data Exchange (ETDEWEB)

    Menachery, Vineet D.; Schafer, Alexandra; Burnum-Johnson, Kristin E.; Mitchell, Hugh D.; Eisfeld-Fenney, Amie J.; Walters, Kevin B.; Nicora, Carrie D.; Purvine, Samuel O.; Casey, Cameron P.; Monroe, Matthew E.; Weitz, Karl K.; Stratton, Kelly G.; Webb-Robertson, Bobbie-Jo M.; Gralinski, Lisa; Metz, Thomas O.; Smith, Richard D.; Waters, Katrina M.; Sims, Amy C.; Kawaoka, Yoshihiro; Baric, Ralph

    2018-01-16

    Convergent evolution dictates that diverse groups of viruses will target both similar and distinct host pathways in order to manipulate the immune response and improve infection. In this study, we sought to leverage this uneven viral antagonism to identify critical host factors that govern disease outcome. Utilizing a systems based approach, we examined differential regulation of IFNγ dependent genes following infection with highly pathogenic viruses including influenza (H5N1-VN1203, H1N1-CA04) and coronaviruses (SARS-CoV, MERS-CoV). Categorizing by function, we observed down regulation of genes associated with antigen presentation following both H5N1-VN1203 and MERS-CoV infection. Further examination revealed global down regulation of antigen presentation genes and was confirmed by proteomics for both H5N1-VN1203 and MERS-CoV infection. Importantly, epigenetic analysis suggested that DNA methylation rather than histone modification plays a crucial role in MERS-CoV mediated antagonism of antigen presentation genes; in contrast, H5N1-VN1203 likely utilizes a combination of epigenetic mechanisms to target antigen presentation. Together, the results indicate a common approach utilized by H5N1-VN1203 and MERS-CoV to modulate antigen presentation and the host adaptive immune response.

  16. EPA RE-Powering America's Lands: Kansas City Municipal Farm Site ₋ Biomass Power Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Hunsberger, R. [National Renewable Energy Lab. (NREL), Golden, CO (United States); Mosey, G. [National Renewable Energy Lab. (NREL), Golden, CO (United States)

    2015-01-01

    Through the RE-Powering America's Land initiative, the economic and technical feasibility of utilizing biomass at the Kansas City, Missouri, Municipal Farm site, a group of City-owned properties, is explored. The study that none of the technologies we reviewed--biomass heat, power and CHP--are economically viable options for the Municipal Farms site. However, if the site were to be developed around a future central biomass heating or CHP facility, biomass could be a good option for the site.

  17. Vaccines for emerging infectious diseases: Lessons from MERS coronavirus and Zika virus.

    Science.gov (United States)

    Maslow, Joel N

    2017-12-02

    The past decade and a half has been characterized by numerous emerging infectious diseases. With each new threat, there has been a call for rapid vaccine development. Pathogens such as the Middle East Respiratory Syndrome coronavirus (MERS-CoV) and the Zika virus represent either new viral entities or viruses emergent in new geographic locales and characterized by novel complications. Both serve as paradigms for the global spread that can accompany new pathogens. In this paper, we review the epidemiology and pathogenesis of MERS-CoV and Zika virus with respect to vaccine development. The challenges in vaccine development and the approach to clinical trial design to test vaccine candidates for disease entities with a changing epidemiology are discussed.

  18. Site selection criteria for shallow land burial of low-level radioactive waste

    International Nuclear Information System (INIS)

    Falconer, K.L.; Hull, L.C.; Mizell, S.A.

    1982-01-01

    Twelve site selection criteria are presented. These are: (1) site shall be of sufficient area and depth to accommodate the projected volume of waste and a three dimensional buffer zone; (2) site should allow waste to be buried either completely above or below the transition zone between the unsaturated and saturated zones; (3) site should be located where flooding will not jeopardize performance; (4) site should be located where erosion will not jeopardize performance; (5) site should be located in areas where hydrogeologic conditions allow reliable performance prediction; (6) site should be located where geologic hazards will not jeopardize performance; (7) site should be selected with considerations given to those characteristics of earth materials and water chemistry that favor increased residence times and/or attenuation of radionuclide concentrations within site boundaries; (8) site should be selected with consideration given to current and projected population distributions; (9) site should be selected with consideration given to current and projected land use and resource development; (10) site should be selected with consideration given to location of waste generation, access to all-weather highway and rail routes, and access utilities; (11) site should be selected consistent with federal laws and regulations; (12) site should not be located within areas that are protected from such use by federal laws and regulations. These criteria are considered preliminary and do not necessarily represent the position of the Department of Energy's Low-Level Waste Management Program

  19. The trans influence in mer-trichloronitridobis(triphenylarsine)ruthenium(VI)

    DEFF Research Database (Denmark)

    Magnussen, Magnus; Bendix, Jesper

    2003-01-01

    The title compound, mer-[RuCl(3)N(C(18)H(15)As)(2)], is the first structurally characterized example of a nitride complex in which ruthenium is six-coordinated to monodentate ligands only. The Ru[triple-bond]N bond length [1.6161 (15) A] is relatively long, and the trans influence of the nitride...

  20. Fac–mer equilibria of coordinated iminodiacetate (ida ) in ternary Cu ...

    Indian Academy of Sciences (India)

    Unknown

    Keywords. Fac–mer equilibria; CuII-iminodiacetate-imidazole/benzimidazole ternary complexes; stability constants. 1. Introduction. Mixed ligand complexes of transition metal ions with amino acids, peptides or their derivatives or analogues, and heterocyclic N-bases can serve as model compounds of bioinorganic interests ...

  1. Passivity Based Nonlinear Attitude Control of the Rømer Satellite

    DEFF Research Database (Denmark)

    Quottrup, Michael Melholt; Krogh-Sørensen, J.; Wisniewski, Rafal

    2001-01-01

    This paper suggests nonlinear attitude control of the Danish satellite Rømer. This satellite will be designed to fulfil two scientific objectives: The observation of stellar oscillations and the detection and localisation of gamma-ray bursts. The satellite will be equipped with a tetrahedron...

  2. Detection of specific IgA antibodies against a novel deamidated 8-Mer gliadin peptide in blood plasma samples from celiac patients.

    Directory of Open Access Journals (Sweden)

    Sara Vallejo-Diez

    Full Text Available We studied whether celiac disease (CD patients produce antibodies against a novel gliadin peptide specifically generated in the duodenum of CD patients by a previously described pattern of CD-specific duodenal proteases. Fingerprinting and ion-trap mass spectrometry of CD-specific duodenal gliadin-degrading protease pattern revealed a new 8-mer gliadin-derived peptide. An ELISA against synthetic deamidated 8-mer peptides (DGP 8-mer was used to study the presence of IgA anti-DGP 8-mer antibodies in plasma samples from 81 children (31 active CD patients (aCD, 17 CD patients on a gluten-free diet (GFD, 10 healthy controls (C and 23 patients with other gastrointestinal pathology (GP and 101 adults (16 aCD, 12 GFD, 27 C and 46 GP-patients. Deamidation of the 8-mer peptide significantly increased the reactivity of the IgA antibodies from CD patients against the peptide. Significant IgA anti-DGP 8-mer antibodies levels were detected in 93.5% of aCD-, 11.8% of GFD- and 4.3% of GP-patients in children. In adults, antibodies were detected in 81.3% of aCD-patients and 8.3% of GFD-patients while were absent in 100% of C- and GP-patients. Duodenal CD-specific gliadin degrading proteases release an 8-mer gliadin peptide that once deamidated is an antigen for specific IgA antibodies in CD patients which may provide a new accurate diagnostic tool in CD.

  3. Vertical view of Apollo 16 landing site located Descartes area lunar nearside

    Science.gov (United States)

    1971-01-01

    A vertical view of the Apollo 16 landing site located in the Descartes area lunar nearside. The overlay indicates the location of the proposed touchdown point for the Apollo 16 Lunar Module. Descartes is located west of the Sea of Nectar and southwest of the Sea of Tranquility. This photograph was taken with a 500mm lens camera from lunar orbit by the Apollo 14 crew.

  4. Year-long metagenomic study of river microbiomes across land use and water quality

    Directory of Open Access Journals (Sweden)

    Thea eVan Rossum

    2015-12-01

    Full Text Available Select bacteria, such as Escherichia coli or coliforms, have been widely used as sentinels of low water quality; however, there are concerns regarding their predictive accuracy for the protection of human and environmental health. To develop improved monitoring systems, a greater understanding of bacterial community structure, function and variability across time is required in the context of different pollution types, such as agricultural and urban contamination. Here, we present a year-long survey of free-living bacterial DNA collected from seven sites along rivers in three watersheds with varying land use in Southwestern Canada. This is the first study to examine the bacterial metagenome in flowing freshwater (lotic environments over such a time span, providing an opportunity to describe bacterial community variability as a function of land use and environmental conditions. Characteristics of the metagenomic data, such as sequence composition and average genome size, vary with sampling site, environmental conditions, and water chemistry. For example, average genome size was correlated with hours of daylight in the agricultural watershed and, across the agriculturally and urban-affected sites, k-mer composition clustering corresponded to nutrient concentrations. In addition to indicating a community shift, this change in average genome size has implications in terms of the normalisation strategies required, and considerations surrounding such strategies in general are discussed. When comparing abundances of gene functional groups between high- and low-quality water samples collected from an agricultural area, the latter had a higher abundance of nutrient metabolism and bacteriophage groups, possibly reflecting an increase in agricultural runoff. This work presents a valuable dataset representing a year of monthly sampling across watersheds and an analysis targeted at establishing a foundational understanding of how bacterial lotic communities

  5. Hydrogeologic factors in the selection of shallow land burial sites for the disposal of low-level radioactive waste

    Science.gov (United States)

    Fischer, John N.

    1986-01-01

    In the United States, low-level radioactive waste is disposed of by shallow land burial. Commercial low-level radioactive waste has been buried at six sites, and low-level radioactive waste generated by the Federal Government has been buried at nine major and several minor sites. Several existing low-level radioactive waste sites have not provided expected protection of the environment. These shortcomings are related, at least in part, to an inadequate understanding of site hydrogeology at the time the sites were selected. To better understand the natural systems and the effect of hydrogeologic factors on long-term site performance, the U.S. Geological Survey has conducted investigations at five of the six commercial low-level radioactive waste sites and at three Federal sites. These studies, combined with those of other Federal and State agencies, have identified and confirmed important hydrogeologic factors in the effective disposal of low-level radioactive waste by shallow land burial. These factors include precipitation, surface drainage, topography, site stability, geology, thickness of the host soil-rock horizon, soil and sediment permeability, soil and water chemistry, and depth to the water table.

  6. Human Mars Landing Site and Impacts on Mars Surface Operations

    Science.gov (United States)

    Hoffman, Stephen J.; Bussey, Ben

    2016-01-01

    This paper describes NASA's initial steps for identifying and evaluating candidate Exploration Zones (EZs) and Regions of Interests (ROIs) for the first human crews that will explore the surface of Mars. NASA's current effort to define the exploration of this planet by human crews, known as the Evolvable Mars Campaign (EMC), provides the context in which these EZs and ROIs are being considered. The EMC spans all aspects of a human Mars mission including launch from Earth, transit to and from Mars, and operations on the surface of Mars. An EZ is a collection of ROIs located within approximately 100 kilometers of a centralized landing site. ROIs are areas relevant for scientific investigation and/or development/maturation of capabilities and resources necessary for a sustainable human presence. The EZ also contains one or more landing sites and a habitation site that will be used by multiple human crews during missions to explore and utilize the ROIs within the EZ. With the EMC as a conceptual basis, the EZ model has been refined to a point where specific site selection criteria for scientific exploration and in situ resource utilization can be defined. In 2015 these criteria were distributed to the planetary sciences community and the in situ resource utilization and civil engineering communities as part of a call for EZ proposals. The resulting "First Landing Site/Exploration Zone Workshop for Human Missions to the Surface of Mars" was held in October 2015 during which 47 proposals for EZs and ROIs were presented and discussed. Proposed locations spanned all longitudes and all allowable latitudes (+/- 50 degrees). Proposed justification for selecting one of these EZs also spanned a significant portion of the scientific and resource criteria provided to the community. Several important findings resulted from this Workshop including: (a) a strong consensus that, at a scale of 100 km (radius), multiple places on Mars exist that have both sufficient scientific interest

  7. Remote Sensing Mars Landing Sites: An Out-of-School Time Planetary Science Education Activity for Middle School Students

    Science.gov (United States)

    Anderson, R. B.; Gaither, T. A.; Edgar, L. A.; Milazzo, M. P.; Vaughan, R. G.; Rubino-Hare, L.; Clark, J.; Ryan, S.

    2017-12-01

    As part of the Planetary Learning that Advances the Nexus of Engineering, Technology, and Science (PLANETS) project, we have developed an out-of-school time unit for middle school students focused on planetary remote sensing. The activity is divided into two exercises, with the goal of choosing a scientifically interesting and safe landing site for a future Mars mission. Students are introduced to NASA data from several actual and proposed landing sites and must use what they learn about remote sensing to choose a site that satisfies scientific and engineering criteria. The activity also includes background information for educators, including a summary of how landing on Mars helps answer major scientific questions, brief overviews of the data sets that the students will use, summaries of the site geology, and a list of relevant vocabulary. The first exercise introduces students to the concept of reflectance spectroscopy and how it can be used to identify the "fingerprints" of different minerals on the surface of Mars. Students are provided with simplified maps of mineral spectra at the four sites, based on Compact Reconnaissance Imaging Spectrometer (CRISM) observations, as well as a reference sheet with the spectra of common minerals on Mars. They can use this information to determine which sites have hydrated minerals, mafic minerals, or both. The second exercise adds data from the Mars Orbital Laser Altimeter (MOLA), and high resolution visible data from the Context Camera (CTX) on the Mars Reconnaissance Orbiter. Students learn about laser altimetry and how to interpret topographic contours to assess whether a landing site is too rough. The CTX data allow students to study the sites at higher resolution, with annotations that indicate key landforms of interest. These data, along with the spectroscopy data, allow students to rank the sites based on science and engineering criteria. This activity was developed as a collaboration between subject matter experts at

  8. Net Biome Productivity of different land use at the sites of the Tharandt cluster

    Science.gov (United States)

    Grünwald, T.; Prescher, A.-K.; Bernhofer, Ch.

    2009-04-01

    Within the Tharandt cluster there are 5 flux monitoring sites including 3 CARBOEUROPE main sites. The CARBOEUROPE sites cover typical land use of the region (spruce [monitored since 1996], grassland [since 2003], cropland [since 2004]). For all sites estimates of the Net Biome Productivity (NBP) and its uncertainty have been derived using Net Ecosystem Productivity (NEP) based on the EC measurements and C exports and imports on an annual basis. The crop site is a small C sink (NEP of 30-110gCm-2a-1) only. The annual NEP values are dependent on the cultivated crop species (winter or summer crop). Including C export (harvest) and C import (manure spreading) lead to a considerable C source of 270-540gCm-2a-1. Organic fertilisation (C import) has a strong impact on NBP values expressed in a reduced annual net carbon source. Also, the largest interannual differences of NBP values are found at this site - mainly induced by the existence and the amount of a carbon import due to organic fertilisation. Management practices affect the NBP in a sensitive way at this crop site. Each crop shows a higher C export due to harvest than the annual NEP. To validate the calculated C equivalent using harvested grain biomass modelled NPP values are available. Uncertainty ranges of C export, C import and NBP as well as the grassland and spruce NBP (for comparison) are also stated. In general, land use and management strongly affect the annual NBP of non-forested ecosystems especially. So, this is the second main driver of the C budget besides the interannual variability in meteorological conditions and water availability with its influence on NEP, GPP and TER.

  9. Vaccines for emerging infectious diseases: Lessons from MERS coronavirus and Zika virus

    Science.gov (United States)

    Maslow, Joel N.

    2017-01-01

    ABSTRACT The past decade and a half has been characterized by numerous emerging infectious diseases. With each new threat, there has been a call for rapid vaccine development. Pathogens such as the Middle East Respiratory Syndrome coronavirus (MERS-CoV) and the Zika virus represent either new viral entities or viruses emergent in new geographic locales and characterized by novel complications. Both serve as paradigms for the global spread that can accompany new pathogens. In this paper, we review the epidemiology and pathogenesis of MERS-CoV and Zika virus with respect to vaccine development. The challenges in vaccine development and the approach to clinical trial design to test vaccine candidates for disease entities with a changing epidemiology are discussed. PMID:28846484

  10. Institutional Control Program: Long Term Care and Control of Decommissioned Mine/Mill Sites Located on Crown Land

    International Nuclear Information System (INIS)

    Cunningham, K.

    2014-01-01

    Institutional Control Program: • Establishes an endpoint for mining company activities on sites located on Crown land; • Establishes funding for the long-term care and control of the closed sites; • Company responsibilities for sites under the Environmental Management and Protection Act remain; • Establishes an Institutional Control Registry; • Establishes an Institutional Control Monitoring and Maintenance Fund and an Institutional Control Unforeseen Events Fund

  11. A multi-faceted approach of a nursing led education in response to MERS-CoV infection

    Directory of Open Access Journals (Sweden)

    Jaffar A. Al-Tawfiq

    2018-03-01

    Full Text Available Background: The emergence of the Middle East respiratory syndrome-coronavirus (MERS-CoV resulted in multiple healthcare associated outbreaks. In response, we developed a nurse-led program to screen and triage patients with MERS-CoV infection. Methods: A formal educational program was implemented to ensure a standardized approach to care planning and delivery. The essential skills that were included were the use of Personal Protective Equipment (PPE including gown, gloves, head cover and N95 mask, hand hygiene, the practice of donning and doffing and the collection of MERS-CoV nasopharyngeal specimens. Results: A core group of nurses were identified from high-risk units. The education program consisted of four skill-days. Nurses were assigned a pre-course work from Mosby’s Nursing Skills, an online skill module, donning and doffing of PPE, and the process for obtaining a nasopharyngeal swab. The skill lab incorporated multiple methods such group discussion, watching an on-line video, and a simulated demonstration and practice on a mannequin. In total, 450 nurses attended the Nasopharyngeal Skills Day and 1000 nurses received training. Donning and doffing PPE and N95 mask fit testing has become an annual mandatory competency requirement for staff in nursing and clinical services. Conclusion: The application of specified protocols minimizes the risks of cross infection, placing emphasis on patient and staff safety as well as expediting the patient to definitive treatment. Nurse educators have an instrumental role in training nurses and other healthcare providers on the specifics needed to identify, contain and manage patient presenting with MERS-CoV. Keywords: Coronavirus, Education, MERS-CoV, Middle East respiratory syndrome, Saudi Arabia, Outbreak preparedness, Hospital care

  12. Renewable energies in the French DOM-TOM : a study of the costs and benefits of transitioning from fossil fuels to renewable energies in the French Départements d’Outre Mer et Territoires d’Outre Mer

    OpenAIRE

    Stanley-Smith, Adam P.

    2010-01-01

    The French Départements d’Outre Mer et Territoires d’Outre Mer (DOM-TOM) are not the most populous region of France. Nor are they the most prosperous, the most important, or even centers of industrial production. Rather, the DOM-TOM possessions have a unique value in French culture: they represent the past glory of the state and its people, and the courage that lead French explorers and settlers to roam the world. Unfortunately, the DOM-TOM represents an ever growing burden upon...

  13. Viking landing sites, remote-sensing observations, and physical properties of Martian surface materials

    Science.gov (United States)

    Moore, H.J.; Jakosky, B.M.

    1989-01-01

    Important problems that confront future scientific exploration of Mars include the physical properties of Martian surface materials and the geologic processes that formed the materials. The design of landing spacecraft, roving vehicles, and sampling devices and the selection of landing sites, vehicle traverses, and sample sites will be, in part, guided by the physical properties of the materials. Four materials occur in the sample fields of the Viking landers: (1) drift, (2) crusty to cloddy, (3) blocky, and (4) rock. The first three are soillike. Drift materials is weak, loose, and porous. We estimate that it has a dielectric constant near 2.4 and a thermal inertia near 1 ?? 10-3 to 3 ?? 10-3 (cal cm-2 sec 1 2 K-1) because of its low bulk density, fine grain size, and small cohesion. Crusty to cloddy material is expected to have a dielectric constant near 2.8 and a thermal inertia near 4 ?? 10-3 to 7 ?? 10-3 because of its moderate bulk density and cementation of grains. Blocky material should have a dielectric constant near 3.3 and a thermal inertia near 7 ?? 10-3 to 9 ?? 10-3 because of its moderate bulk density and cementation. Common basaltic rocks have dielectric constans near 8 and thermal inertias near 30 ?? 10-3 to 60 ?? 10-3. Comparisons of estimated dielectric constants and thermal inertias of the materials at the landing sites with those obtained remotely by Earth-based radars and Viking Orbiter thermal sensors suggest that the materials at the landing sites are good analogs for materials elsewhere on Mars. Correlation of remotely estimated dielectric constant and thermal inertias indicates two modal values for paired values of dielectric constants and thermal inertias near (A) 2 and 2 ?? 10-3 and (B) 3 and 6 ?? 10-3, respectively. These two modes are comparable to the dielectric constants and thermal inertias for drift and crusty to cloddy material, respectively. Dielectric constants and thermal inertias for blocky material are larger but conistent

  14. NMR studies of abasic sites in DNA duplexes: deoxyadenosine stacks into the helix opposite the cyclic analog of 2-deoxyribose

    International Nuclear Information System (INIS)

    Kalnik, M.W.; Chang, C.N.; Grollman, A.P.; Patel, D.J.

    1988-01-01

    Proton and phosphorus NMR studies are reported for the complementary d(C-A-T-G-A-G-T-A-C) x d(G-T-A-C-F-C-A-T-G) nonanucleotide duplex (designated AP/sub F/ 9-mer duplex) which contains a stable abasic site analog, F, in the center of the helix. This oligodeoxynucleotide contains a modified tetrahydrofuran moiety, isosteric with 2-deoxyribofuranose, which serves as a structural analog of a natural apurinic/apyrimidinic site. Exchangeable and nonexchangeable base and sugar protons, including those located at the abasic site, have been assigned in the complementary AP/sub F/ 9-mer duplex by recording and analyzing two-dimensional phase-sensitive NOESY data sets in H 2 O and D 2 O solution at low temperature (0 0 C). These studies indicate that A5 inserts into the helix opposite the abasic site F14 and stacks with flanking G4 x C15 and G6 x C13 Watson-Crick base pairs. Base-sugar proton NOE connectivities were measured through G4-A5-G6 on the unmodified strand and between the base protons of C15 and the sugar protons of the 5'-flanking residue F14 on the modified strand. These studies establish that all glycosidic torsion angles are anti and that the helix is right-handed at and adjacent to the abasic site in the AP/sub F/ 9-mer duplex. Two of the 16 phosphodiester groups exhibit phosphorus resonances outside the normal spectral dispersion indicative of altered torsion angles at two of the phosphate groups in the backbone of the AP/sub F/ 9-mer duplex

  15. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Brisbane Baylands Brownfield Site in Brisbane, California. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Salasovich, J.; Geiger, J.; Healey, V.; Mosey, G.

    2013-04-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Brisbane Baylands site in Brisbane, California, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  16. Pathways to man for radionuclides released from disposal sites on land

    International Nuclear Information System (INIS)

    Hill, M.D.

    1986-01-01

    To predict the potential radiological impact on man of the disposal of radioactive wastes it is necessary to identify all the events and processes that could cause releases of radionuclides into the environment, to estimate their probabilities of occurrence and to calculate their consequences, for both individuals and populations. This paper briefly reviews the types of releases that have to be considered for land disposal sites and describes the mathematical models used to calculate rates of transport of radionuclides through the environment and doses to man. The difficulties involved in predicting environmental conditions in the far future are discussed, in the light of the ways in which the results of consequence calculations will be used. Assessments of land disposal of long-lived and highly radioactive wastes are briefly reviewed, with the aim of identifying the most important radionuclides and exposure pathways, and the areas where the models and their databases require improvement. (author)

  17. A description of LUSTRA's common field sites[Forestry land use and greenhouse gas emissions

    Energy Technology Data Exchange (ETDEWEB)

    Berggren, Dan [Swedish Univ. of Agricultural Sciences, Uppsala (Sweden). Dept. of Soil Sciences; Bergkvist, Bo [Lund Univ. (Sweden). Dept. of Ecology; Johansson, Maj-Britt; Melkerud, Per-Arne; Nilsson, Aake; Olsson, Mats [Swedish Univ. of Agricultural Sciences, Uppsala (Sweden). Dept. of Forest Soils; Langvall, Ola [Swedish Univ. of Agricultural Sciences, Lammhult (Sweden). Asa Experimental Forest; Majdi, Hooshang [Swedish Univ. of Agricultural Sciences, Uppsala (Sweden). Dept. of Ecology and Environmental Research; Weslien, Per [Goeteborg Univ. (Sweden). Botanical Inst.

    2004-07-01

    The LUSTRA program is focused on the greenhouse gases CO{sub 2} and N{sub 2}O, which are occurring in the atmosphere in increasing concentrations and causing a global warming effect. Carbon dioxide is being fixed in living biomass and released through respiration and decomposing processes. Nitrous oxide may be emitted, due to reduction processes, particularly from wet and nutrient-rich soils. Land use and soil management may significantly affect these processes, and a change in land use may induce reduced or increased emissions. The LUSTRA program vision is that strategic adaptation of land-use systems in managed forests in Sweden can greatly reduce net emissions of GHG. Forestry plays an important role through its potential to produce biomass for fossil fuel substitution and by sequestering carbon in standing biomass and soil organic matter including peat. Sweden has a land area of approximately 410,000 km{sup 2} of which 226,000 km{sup 2} (55 %) is forest land, defined as land suitable for forest production and with a potential mean stem production > 1m{sup 3}/ha/y. With a population of around 9 million inhabitants this gives the second largest forest land area per capita in Europe. Due to this large forest land area, Sweden has a significant strategic potential to mitigate CO{sub 2} emissions by management of forested land. During its first phase, 1999-2002, the primary objective of the program was to evaluate various land-use and management options with respect to emissions of GHG with the ultimate goal to suggest guidelines with strategies for optimized reduction in emissions. Since the start of LUSTRA, the external environment and conditions for the program have changed. First, the significance of the greenhouse-gas problem has increased partly due to growing common awareness of the magnitude of the problem and partly due and fueled by current extreme weather conditions. Secondly, the progress of international negotiations has stressed the national demand to

  18. Healthcare worker exposure to Middle East respiratory syndrome coronavirus (MERS-CoV: Revision of screening strategies urgently needed

    Directory of Open Access Journals (Sweden)

    Hala Amer

    2018-06-01

    Conclusions: The data obtained in this study support the widespread testing of all close contacts of MERS-CoV cases, regardless of the significance of the contact or presence or absence of symptoms. In addition, urgent careful review of guidance regarding the return of asymptomatic MERS-CoV-positive HCWs under investigation to active duty is needed.

  19. Geology and MER target site characteristics along the southern rim of Isidis Planitia, Mars

    Science.gov (United States)

    Crumpler, L.S.; Tanaka, K.L.

    2003-01-01

    crustal materials, in the form of rocks within the debris fans, and the weathered condition of the rocky material are potential sources for mineralogical evidence of climatic conditions in earliest Martian geologic history. The absence of alteration within rocks would, on the other hand, support the hypothesis that fluvial runoff during the earliest history of Mars was geologically brief rather than long-term and that long-term saturated groundwater flow was not present. Determination of the presence or absence of alteration would have corresponding implications for hypotheses requiring the long-term presence of aqueous solutions (i.e., complex organic compounds and life). A proposed MER site along the margin addresses realistic field science objectives of the Mars Exploration Rover mission and the current goals of the Mars Exploration Program. In situ measurements may be important in deriving estimates of the longevity and intensity of past wetter climates. Copyright 2003 by the American Geophysical Union.

  20. Integrated Weed Control for Land Stewardship at Legacy Management's Rocky Flats Site in Colorado - 13086

    Energy Technology Data Exchange (ETDEWEB)

    Nelson, Jody K. [Stoller LMS Team, Contractor to the U.S. Department of Energy Office of Legacy Management, 11025 Dover Street, Suite 1000, Westminster, Colorado 80021 (United States)

    2013-07-01

    Land stewardship is one of nine sustainability programs in the U.S. Department of Energy's Environmental Management System. Land stewardship includes maintaining and improving ecosystem health. At the Rocky Flats Site near Westminster, Colorado, land stewardship is an integral component of the Office of Legacy Management's post-closure monitoring and management at the site. Nearly 263 hectares (650 acres) were disturbed and re-vegetated during site cleanup and closure operations. Proactive management of revegetation areas is critical to the successful reestablishment of native grasslands, wetlands, and riparian communities. The undisturbed native plant communities that occur at the site also require active management to maintain the high-quality wetlands and other habitats that are home to numerous species of birds and other wildlife such as elk and deer, rare plant communities, and the federally listed threatened Preble's meadow jumping mouse. Over the past several decades, an increase of Noxious weeds has impacted much of Colorado's Front Range. As a result, weed control is a key component of the land stewardship program at Rocky Flats. Thirty-three species of state-listed Noxious weeds are known to occur in the Central and Peripheral Operable Units at Rocky Flats, along with another five species that are considered invasive at the site. Early detection and rapid response to control new invasive species is crucial to the program. An integrated weed control/vegetation management approach is key to maintaining healthy, sustainable plant communities that are able to resist Noxious weed invasions. Weed mapping, field surveys, and field-staff training sessions (to learn how to identify new potential problem species) are conducted to help detect and prevent new weed problems. The integrated approach at Rocky Flats includes administrative and cultural techniques (prevention), mechanical controls, biological controls, and chemical controls. Several

  1. Merónimos de la gastronomía costarricense: Limón y Valle Central

    OpenAIRE

    Leoni de León, Jorge Antonio; Barahona Gamboa, Hazel

    2016-01-01

    Resumen La definición de un platillo culinario implica la descripción de sus partes, dentro de las cuales podemos incluir los ingredientes; por ejemplo, la carne es parte de un estofado. En este sentido, los ingredientes son merónimos y, además, pueden ser objeto de una clasificación según el proceso al que están sometidos en la receta; es decir, si son mezclados, hervidos, horneados, polvoreados, cortados, etc. Así, nos avocamos a establecer y clasificar los merónimos, según estos criterios,...

  2. Maryland Power Plant Siting Project: an application of the ORNL-Land Use Screening Procedure

    International Nuclear Information System (INIS)

    Dobson, J.E.

    1975-01-01

    Since 1974 the Resource Analysis Group in the Regional and Urban Studies Section of the Oak Ridge National Laboratory (ORNL) has been engaged in developing a procedure for regional and local siting analysis known as the ORNL Land Use Screening Procedure (LUSP). This document is the final report of the Maryland Power Plant Siting Project (MPPSP) in which the ORNL LUSP was used to identify candidate areas for power plant sites in northern Maryland. Numerous candidate areas are identified on the basis of four different siting objectives: the minimization of adverse ecologic impact, the minimization of adverse socioeconomic impact, the minimization of construction and operating costs, and a composite of all siting objectives. Siting criteria have been defined for each of these objectives through group processing techniques administered to four different groups of siting specialists. The siting priorities and opinions of each group have been expressed quantitatively and applied to a geographic information system containing 52 variables for each 91.8-acre cell in the northern eight counties of Maryland

  3. Maryland Power Plant Siting Project: an application of the ORNL-Land Use Screening Procedure

    Energy Technology Data Exchange (ETDEWEB)

    Dobson, J.E.

    1975-01-01

    Since 1974 the Resource Analysis Group in the Regional and Urban Studies Section of the Oak Ridge National Laboratory (ORNL) has been engaged in developing a procedure for regional and local siting analysis known as the ORNL Land Use Screening Procedure (LUSP). This document is the final report of the Maryland Power Plant Siting Project (MPPSP) in which the ORNL LUSP was used to identify candidate areas for power plant sites in northern Maryland. Numerous candidate areas are identified on the basis of four different siting objectives: the minimization of adverse ecologic impact, the minimization of adverse socioeconomic impact, the minimization of construction and operating costs, and a composite of all siting objectives. Siting criteria have been defined for each of these objectives through group processing techniques administered to four different groups of siting specialists. The siting priorities and opinions of each group have been expressed quantitatively and applied to a geographic information system containing 52 variables for each 91.8-acre cell in the northern eight counties of Maryland.

  4. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Price Landfill Site in Pleasantville, New Jersey. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Salasovich, J.; Geiger, J.; Mosey, G.; Healey, V.

    2013-05-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Price Landfill site in Pleasantville, New Jersey, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site. This study did not assess environmental conditions at the site.

  5. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Tower Road Site in Aurora, Colorado. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Van Geet, O.; Mosey, G.

    2013-03-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Tower Road site in Aurora, Colorado, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site. This study did not assess environmental conditions at the site.

  6. No MERS-CoV but positive influenza viruses in returning Hajj pilgrims, China, 2013–2015

    Directory of Open Access Journals (Sweden)

    Xuezheng Ma

    2017-11-01

    Full Text Available Abstract Background There is global health concern that the mass movement of pilgrims to and from Mecca annually could contribute to the international spread of Middle East Respiratory Syndrome Coronavirus (MERS-CoV. In China, about 11,000 Muslim pilgrims participate in the Hajj gathering in Mecca annually. This is the first report of MERS-CoV and respiratory virus molecular screening of returning pilgrims at points of entry in China from 2013 to 2015. Methods and results A total of 847 returning Hajj pilgrims participated in this study. The test results indicated that of the travelers, 34 tested positive for influenza A virus, 14 for influenza B virus, 4 for metapneumo virus, 2 for respiratory syncytial virus, and 3 for human coronavirus. There was a significant difference in the rates of positive and negative influenza virus tests between Hajj pilgrims with symptoms and those without. The detection rates of influenza virus were not significantly different among the three years studied, at 5.3, 6.0 and 6.3% for 2013, 2014 and 2015, respectively. Discussion and conclusion The MERS-CoV and respiratory viruses detection results at points of entry in China from 2013 to 2015 indicated that there were no MERS-CoV infection but a 5.7% positive influenza viruses in returning Chinese pilgrims.

  7. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Kerr McGee Site in Columbus, Mississippi. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Simon, J.; Mosey, G.

    2013-01-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Kerr McGee site in Columbus, Mississippi, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  8. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Crazy Horse Landfill Site in Salinas, California. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Stoltenberg, B.; Konz, C.; Mosey, G.

    2013-03-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Crazy Horse Landfill site in Salinas, California, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) was contacted to provide technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, operation and maintenance requirements, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  9. Decontamination of abandoned sites. An introduction into the problems of land decontamination

    International Nuclear Information System (INIS)

    Kundt, K.

    1991-01-01

    Starting from a brief overview of the history of origin of soil and ground water pollution in Berlin and its surroundings by gas, chemical, and petroleum works, old landfills, manufactories of arms and ammunition as well as gasoline depots or sites of gasoline depots, the brochure describes the legal situation and procedure (list of 'intervention' values) and goes on to outline the situation regarding the ground under Berlin, existing pollutants, and methods for dealing with land contamination. In five abandoned sites (waste oil refinery, copper refinery, waste solvent treatment plant, asphalt factory and drugs factory), different methods for eliminating soil and ground water contamination were used. Their efficacy is assessed on the basis of their soil and pollutant-specific suitability; the decontamination achieved is indicated. (BBR) [de

  10. View of Commemorative plaque left on moon at Hadley-Apennine landing site

    Science.gov (United States)

    1971-01-01

    A close-up view of a commemorative plaque left on the Moon at the Hadley-Apennine landing site in memory of 14 NASA astronauts and USSR cosmonauts, now deceased. Their names are inscribed in alphabetical order on the plaque. The plaque was stuck in the lunar soil by Astronauts David R. Scott and James B. Irwin during their Apollo 15 lunar surface extravehicular activity. The tin, man-like object represents the figure of a fallen astronaut/cosmonaut.

  11. DOI criticized for failing to inventory hazardous waste sites on federal lands

    International Nuclear Information System (INIS)

    Anon.

    1993-01-01

    The Department of the Interior (DOI) manages approximately 440 million acres of public land across the United States, including national parks and forests, wildlife refuges, fish hatcheries, and water and hydroelectric projects. At these facilities, hazardous wastes are commonly generated through such activities as oil and gas drilling, coal mining, hydroelectric plant operation, and pesticide application. Consequently, a significant number of DOI sites are probably contaminated and thus must be identified, assessed, and remediated. 2 refs., 1 tab

  12. Land cover and topography affect the land transformation caused by wind facilities.

    Directory of Open Access Journals (Sweden)

    Jay E Diffendorfer

    Full Text Available Land transformation (ha of surface disturbance/MW associated with wind facilities shows wide variation in its reported values. In addition, no studies have attempted to explain the variation across facilities. We digitized land transformation at 39 wind facilities using high resolution aerial imagery. We then modeled the effects of turbine size, configuration, land cover, and topography on the levels of land transformation at three spatial scales. The scales included strings (turbines with intervening roads only, sites (strings with roads connecting them, buried cables and other infrastructure, and entire facilities (sites and the roads or transmission lines connecting them to existing infrastructure. An information theoretic modeling approach indicated land cover and topography were well-supported variables affecting land transformation, but not turbine size or configuration. Tilled landscapes, despite larger distances between turbines, had lower average land transformation, while facilities in forested landscapes generally had the highest land transformation. At site and string scales, flat topographies had the lowest land transformation, while facilities on mesas had the largest. The results indicate the landscape in which the facilities are placed affects the levels of land transformation associated with wind energy. This creates opportunities for optimizing wind energy production while minimizing land cover change. In addition, the results indicate forecasting the impacts of wind energy on land transformation should include the geographic variables affecting land transformation reported here.

  13. A pipeline for the de novo assembly of the Themira biloba (Sepsidae: Diptera) transcriptome using a multiple k-mer length approach.

    Science.gov (United States)

    Melicher, Dacotah; Torson, Alex S; Dworkin, Ian; Bowsher, Julia H

    2014-03-12

    The Sepsidae family of flies is a model for investigating how sexual selection shapes courtship and sexual dimorphism in a comparative framework. However, like many non-model systems, there are few molecular resources available. Large-scale sequencing and assembly have not been performed in any sepsid, and the lack of a closely related genome makes investigation of gene expression challenging. Our goal was to develop an automated pipeline for de novo transcriptome assembly, and to use that pipeline to assemble and analyze the transcriptome of the sepsid Themira biloba. Our bioinformatics pipeline uses cloud computing services to assemble and analyze the transcriptome with off-site data management, processing, and backup. It uses a multiple k-mer length approach combined with a second meta-assembly to extend transcripts and recover more bases of transcript sequences than standard single k-mer assembly. We used 454 sequencing to generate 1.48 million reads from cDNA generated from embryo, larva, and pupae of T. biloba and assembled a transcriptome consisting of 24,495 contigs. Annotation identified 16,705 transcripts, including those involved in embryogenesis and limb patterning. We assembled transcriptomes from an additional three non-model organisms to demonstrate that our pipeline assembled a higher-quality transcriptome than single k-mer approaches across multiple species. The pipeline we have developed for assembly and analysis increases contig length, recovers unique transcripts, and assembles more base pairs than other methods through the use of a meta-assembly. The T. biloba transcriptome is a critical resource for performing large-scale RNA-Seq investigations of gene expression patterns, and is the first transcriptome sequenced in this Dipteran family.

  14. Effect of disorder correlation in random mers

    International Nuclear Information System (INIS)

    Brezini, A.; Sebbani, M.; Depollier, C.; Belbachir, M.

    1995-12-01

    A widely held view in solid-state physics is that disorder precludes the presence of long-range transport in one-dimension. Recently a series of models has been proposed that do not conform to this view such as the well known Random Dimer Model (RDM). In the following paper, we must present a generalization of the RDM. In particular, the nature of the eigenstates of a non-interacting electron is investigated by means of a popular one-dimensional Kronig-Penney Hamiltonian in which n-mers have been placed at random on a regular lattice. Mainly in each allowed energy band of the spectrum, it is found that n-mers exhibits n - 1 resonances associated to extended states. Moreover these resonances appear to be narrower if the potential is attractive against repulsive, i.e. constituted of wells instead barriers, which discriminates the ability in localizing the eigenstates. Attention has been paid to the energy transition as one approaches the two resonances of the random trimer within the first allowed band. The transition exhibits a smooth behaviour for the lower energy when compared to the higher one with respect to the first resonance and shows quite a similar behaviour for both sides close to the second resonance. The discrepancy is attributed to the typical nature of the eigenstates for each resonance. Correspondingly, the wave functions associated to the first resonance are not like Bloch-waves while for the second one they look like the crystal wave functions displaying only minor distortions. (author). 44 refs, 6 figs

  15. Overview of preparedness and response for Middle East respiratory syndrome coronavirus (MERS-CoV) in Oman.

    Science.gov (United States)

    Al-Abaidani, I S; Al-Maani, A S; Al-Kindi, H S; Al-Jardani, A K; Abdel-Hady, D M; Zayed, B E; Al-Harthy, K S; Al-Shaqsi, K H; Al-Abri, S S

    2014-12-01

    Several countries in the Middle East and around 22 countries worldwide have reported cases of human infection with the Middle East respiratory syndrome coronavirus (MERS-CoV). The exceptionally high fatality rate resulting from MERS-CoV infection in conjunction with the paucity of knowledge about this emerging virus has led to major public and international concern. Within the framework of the national acute respiratory illness surveillance, the Ministry of Health in the Sultanate of Oman has announced two confirmed cases of MERS-CoV to date. The aim of this report is to describe the epidemiological aspects of these two cases and to highlight the importance of public health preparedness and response. The absence of secondary cases among contacts of the reported cases can be seen as evidence of the effectiveness of infection prevention and control precautions as an important pillar of the national preparedness and response plan applied in the health care institutions in Oman. Copyright © 2014. Published by Elsevier Ltd.

  16. Overview of preparedness and response for Middle East respiratory syndrome coronavirus (MERS-CoV in Oman

    Directory of Open Access Journals (Sweden)

    I.S. Al-Abaidani

    2014-12-01

    Full Text Available Several countries in the Middle East and around 22 countries worldwide have reported cases of human infection with the Middle East respiratory syndrome coronavirus (MERS-CoV. The exceptionally high fatality rate resulting from MERS-CoV infection in conjunction with the paucity of knowledge about this emerging virus has led to major public and international concern. Within the framework of the national acute respiratory illness surveillance, the Ministry of Health in the Sultanate of Oman has announced two confirmed cases of MERS-CoV to date. The aim of this report is to describe the epidemiological aspects of these two cases and to highlight the importance of public health preparedness and response. The absence of secondary cases among contacts of the reported cases can be seen as evidence of the effectiveness of infection prevention and control precautions as an important pillar of the national preparedness and response plan applied in the health care institutions in Oman.

  17. Caractéristiques biologiques de la truite de mer (Salmo trutta L. au Nord de l'Espagne, dans deux rivières des Asturies

    Directory of Open Access Journals (Sweden)

    TOLEDO Ma Del Mar

    1993-07-01

    Full Text Available Une première caractérisation des truites de mer des rivières du Nord de l'Espagne (Asturies est réalisée à partir de l'analyse de la structure de taille et d'âge, ainsi que celle de l'alimentation et des paramètres reproducteurs des poissons adultes. Les truites proviennent des captures réalisées à la ligne (de juin à août sur les rivières Cares et Narcea et par pêche électrique sur les zones de frayères du Narcea durant la saison de reproduction (novembre à janvier. Les truites de mer échantillonnées durant la saison de pêche ont une structure d'âge semblable sur les deux cours d'eau. Environ 85% des individus sont restés deux ans en eau douce avant de descendre en mer, et plus de 95% d'entre eux appartiennent aux classes d'âge de mer 0 + et 1 + . L'importance relative des poissons de 0 + de mer (finnock est légèrement plus élevée dans le Cares (68% que dans le Narcea (51 %. Le rapport des sexes est en faveur des femelles, quelle que soit la classe d'âge de mer. La structure d'âge marin des truites capturées en période de reproduction ne diffère pas de celle observée durant la saison de pêche, bien que montrant une haute proportion de 0 + de mer (32% de l'ensemble des poissons matures. Le taux de maturation chez les truites de 0 + de mer est particulièrement élevé ( 81% parmi les femelles et 100% chez les mâles et tous les individus des autres classes d'âge de mer sont matures. Le nombre d'oeufs (de 571 à 2086 oeufs par femelle et l'index gonadosomatique sont positivement corrélés à la taille et à l'âge de mer des femelles. La truite de mer se nourrit activement en eau douce durant la remontée estivale, puisque 81 % des estomacs examinés étaient pleins. Elle consomme principalement des Epheméroptères, des Diptères et des Trichoptères, mais son alimentation inclut également des proies d'origine terrestre, essentiellement des Arthropodes.

  18. Enhanced inflammation in New Zealand white rabbits when MERS-CoV reinfection occurs in the absence of neutralizing antibody.

    Directory of Open Access Journals (Sweden)

    Katherine V Houser

    2017-08-01

    Full Text Available The Middle East respiratory syndrome coronavirus (MERS-CoV is a zoonotic betacoronavirus that was first detected in humans in 2012 as a cause of severe acute respiratory disease. As of July 28, 2017, there have been 2,040 confirmed cases with 712 reported deaths. While many infections have been fatal, there have also been a large number of mild or asymptomatic cases discovered through monitoring and contact tracing. New Zealand white rabbits are a possible model for asymptomatic infection with MERS-CoV. In order to discover more about non-lethal infections and to learn whether a single infection with MERS-CoV would protect against reinfection, we inoculated rabbits with MERS-CoV and monitored the antibody and inflammatory response. Following intranasal infection, rabbits developed a transient dose-dependent pulmonary infection with moderately high levels of viral RNA, viral antigen, and perivascular inflammation in multiple lung lobes that was not associated with clinical signs. The rabbits developed antibodies against viral proteins that lacked neutralizing activity and the animals were not protected from reinfection. In fact, reinfection resulted in enhanced pulmonary inflammation, without an associated increase in viral RNA titers. Interestingly, passive transfer of serum from previously infected rabbits to naïve rabbits was associated with enhanced inflammation upon infection. We further found this inflammation was accompanied by increased recruitment of complement proteins compared to primary infection. However, reinfection elicited neutralizing antibodies that protected rabbits from subsequent viral challenge. Our data from the rabbit model suggests that people exposed to MERS-CoV who fail to develop a neutralizing antibody response, or persons whose neutralizing antibody titers have waned, may be at risk for severe lung disease on re-exposure to MERS-CoV.

  19. From Prime to Extended Mission: Evolution of the MER Tactical Uplink Process

    Science.gov (United States)

    Mishkin, Andrew H.; Laubach, Sharon

    2006-01-01

    To support a 90-day surface mission for two robotic rovers, the Mars Exploration Rover mission designed and implemented an intensive tactical operations process, enabling daily commanding of each rover. Using a combination of new processes, custom software tools, a Mars-time staffing schedule, and seven-day-a-week operations, the MER team was able to compress the traditional weeks-long command-turnaround for a deep space robotic mission to about 18 hours. However, the pace of this process was never intended to be continued indefinitely. Even before the end of the three-month prime mission, MER operations began evolving towards greater sustainability. A combination of continued software tool development, increasing team experience, and availability of reusable sequences first reduced the mean process duration to approximately 11 hours. The number of workshifts required to perform the process dropped, and the team returned to a modified 'Earth-time' schedule. Additional process and tool adaptation eventually provided the option of planning multiple Martian days of activity within a single workshift, making 5-day-a-week operations possible. The vast majority of the science team returned to their home institutions, continuing to participate fully in the tactical operations process remotely. MER has continued to operate for over two Earth-years as many of its key personnel have moved on to other projects, the operations team and budget have shrunk, and the rovers have begun to exhibit symptoms of aging.

  20. Cutoffs and k-mers: implications from a transcriptome study in allopolyploid plants

    Directory of Open Access Journals (Sweden)

    Gruenheit Nicole

    2012-03-01

    Full Text Available Abstract Background Transcriptome analysis is increasingly being used to study the evolutionary origins and ecology of non-model plants. One issue for both transcriptome assembly and differential gene expression analyses is the common occurrence in plants of hybridisation and whole genome duplication (WGD and hybridization resulting in allopolyploidy. The divergence of duplicated genes following WGD creates near identical homeologues that can be problematic for de novo assembly and also reference based assembly protocols that use short reads (35 - 100 bp. Results Here we report a successful strategy for the assembly of two transcriptomes made using 75 bp Illumina reads from Pachycladon fastigiatum and Pachycladon cheesemanii. Both are allopolyploid plant species (2n = 20 that originated in the New Zealand Alps about 0.8 million years ago. In a systematic analysis of 19 different coverage cutoffs and 20 different k-mer sizes we showed that i none of the genes could be assembled across all of the parameter space ii assembly of each gene required an optimal set of parameter values and iii these parameter values could be explained in part by different gene expression levels and different degrees of similarity between genes. Conclusions To obtain optimal transcriptome assemblies for allopolyploid plants, k-mer size and k-mer coverage need to be considered simultaneously across a broad parameter space. This is important for assembling a maximum number of full length ESTs and for avoiding chimeric assemblies of homeologous and paralogous gene copies.

  1. Prevalence of comorbidities in the Middle East respiratory syndrome coronavirus (MERS-CoV: a systematic review and meta-analysis

    Directory of Open Access Journals (Sweden)

    Alaa Badawi

    2016-08-01

    Full Text Available The Middle East respiratory syndrome coronavirus (MERS-CoV is associated with life-threatening severe illnesses and a mortality rate of approximately 35%, particularly in patients with underlying comorbidities. A systematic analysis of 637 MERS-CoV cases suggests that diabetes and hypertension are equally prevalent in approximately 50% of the patients. Cardiac diseases are present in 30% and obesity in 16% of the cases. These conditions down-regulate the synthesis of proinflammatory cytokines and impair the host's innate and humoral immune systems. In conclusion, protection against MERS-CoV and other respiratory infections can be improved if public health vaccination strategies are tailored to target persons with chronic disorders.

  2. Estimation of basic reproduction number of the Middle East respiratory syndrome coronavirus (MERS-CoV) during the outbreak in South Korea, 2015.

    Science.gov (United States)

    Chang, Hyuk-Jun

    2017-06-13

    In South Korea, an outbreak of Middle East respiratory syndrome (MERS) occurred in 2015. It was the second largest MERS outbreak. As a result of the outbreak in South Korea, 186 infections were reported, and 36 patients died. At least 16,693 people were isolated with suspicious symptoms. This paper estimates the basic reproduction number of the MERS coronavirus (CoV), using data on the spread of MERS in South Korea. The basic reproduction number of an epidemic is defined as the average number of secondary cases that an infected subject produces over its infectious period in a susceptible and uninfected population. To estimate the basic reproduction number of the MERS-CoV, we employ data from the 2015 South Korea MERS outbreak and the susceptible-infected-removed (SIR) model, a mathematical model that uses a set of ordinary differential equations (ODEs). We fit the model to the epidemic data of the South Korea outbreak minimizing the sum of the squared errors to identify model parameters. Also we derive the basic reproductive number as the terms of the parameters of the SIR model. Then we determine the basic reproduction number of the MERS-CoV in South Korea in 2015 as 8.0977. It is worth comparing with the basic reproductive number of the 2014 Ebola outbreak in West Africa including Guinea, Sierra Leone, and Liberia, which had values of 1.5-2.5. There was no intervention to control the infection in the early phase of the outbreak, thus the data used here provide the best conditions to evaluate the epidemic characteristics of MERS, such as the basic reproduction number. An evaluation of basic reproduction number using epidemic data could be problematic if there are stochastic fluctuations in the early phase of the outbreak, or if the report is not accurate and there is bias in the data. Such problems are not relevant to this study because the data used here were precisely reported and verified by Korea Hospital Association.

  3. Estimation des caractéristiques biologiques des truites de mer adultes (Salmo trutta du Rhin supérieur

    Directory of Open Access Journals (Sweden)

    OMBREDANE D.

    1998-07-01

    Full Text Available L'analyse des longueurs totales et des écailles d'un échantillon de 120 truites de mer adultes capturées essentiellement par pêche à l'électricité dans le Rhin supérieur (700 km de la mer du Nord de 1989 à 1996 a permis de caractériser la population de cette ressource piscicole en voie de restauration. L'utilisation des Captures Par Unité d'Effort (CPUE, calculées pour les pêches de 1994 à 1996, permet d'appréhender le rythme de migration et d'améliorer l'estimation des caractéristiques générales de la population. Dans cette partie du Rhin, la migration anadrome de la truite de mer se déroule en deux pics successifs de juin à décembre, les individus les plus âgés arrivant les premiers. La population est caractérisée par une très forte prédominance des groupes d'âge de mer 1 + (49,2 % et 2+ (45,8 %, soit un Age Moyen de Mer (AMM de 1,54 an. L'Age Moyen de Smoltification (AMS et de première Reproduction (AMR sont estimés respectivement à 1,30 an et 1,39 an. Par ailleurs, il est constaté que l'âge marin de première maturité des adultes du Rhin augmente quand leur âge de smoltification diminue. Les résultats sont discutés en fonction de la méthodologie employée et comparés à ceux obtenus sur d'autres populations françaises et plus nordiques. Il ressort que les caractéristiques de la population de truite de mer du Rhin traduisent bien la position latitudinale mais aussi l'importance de ce réseau hydrographique.

  4. Total Site Heat Integration Considering Pressure Drops

    Directory of Open Access Journals (Sweden)

    Kew Hong Chew

    2015-02-01

    Full Text Available Pressure drop is an important consideration in Total Site Heat Integration (TSHI. This is due to the typically large distances between the different plants and the flow across plant elevations and equipment, including heat exchangers. Failure to consider pressure drop during utility targeting and heat exchanger network (HEN synthesis may, at best, lead to optimistic energy targets, and at worst, an inoperable system if the pumps or compressors cannot overcome the actual pressure drop. Most studies have addressed the pressure drop factor in terms of pumping cost, forbidden matches or allowable pressure drop constraints in the optimisation of HEN. This study looks at the implication of pressure drop in the context of a Total Site. The graphical Pinch-based TSHI methodology is extended to consider the pressure drop factor during the minimum energy requirement (MER targeting stage. The improved methodology provides a more realistic estimation of the MER targets and valuable insights for the implementation of the TSHI design. In the case study, when pressure drop in the steam distribution networks is considered, the heating and cooling duties increase by 14.5% and 4.5%.

  5. Cassini/VIMS hyperspectral observations of the HUYGENS landing site on Titan

    Science.gov (United States)

    Rodriguez, S.; Le, Mouelic S.; Sotin, Christophe; Clenet, H.; Clark, R.N.; Buratti, B.; Brown, R.H.; McCord, T.B.; Nicholson, P.D.; Baines, K.H.

    2006-01-01

    Titan is one of the primary scientific objectives of the NASA-ESA-ASI Cassini-Huygens mission. Scattering by haze particles in Titan's atmosphere and numerous methane absorptions dramatically veil Titan's surface in the visible range, though it can be studied more easily in some narrow infrared windows. The Visual and Infrared Mapping Spectrometer (VIMS) instrument onboard the Cassini spacecraft successfully imaged its surface in the atmospheric windows, taking hyperspectral images in the range 0.4-5.2 ??m. On 26 October (TA flyby) and 13 December 2004 (TB flyby), the Cassini-Huygens mission flew over Titan at an altitude lower than 1200 km at closest approach. We report here on the analysis of VIMS images of the Huygens landing site acquired at TA and TB, with a spatial resolution ranging from 16 to14.4 km/pixel. The pure atmospheric backscattering component is corrected by using both an empirical method and a first-order theoretical model. Both approaches provide consistent results. After the removal of scattering, ratio images reveal subtle surface heterogeneities. A particularly contrasted structure appears in ratio images involving the 1.59 and 2.03 ??m images north of the Huygens landing site. Although pure water ice cannot be the only component exposed at Titan's surface, this area is consistent with a local enrichment in exposed water ice and seems to be consistent with DISR/Huygens images and spectra interpretations. The images show also a morphological structure that can be interpreted as a 150 km diameter impact crater with a central peak. ?? 2006 Elsevier Ltd. All rights reserved.

  6. High proportion of MERS-CoV shedding dromedaries at slaughterhouse with a potential epidemiological link to human cases, Qatar 2014

    Directory of Open Access Journals (Sweden)

    Elmoubasher A. B. A. Farag

    2015-07-01

    Full Text Available Two of the earliest Middle East respiratory syndrome (MERS cases were men who had visited the Doha central animal market and adjoining slaughterhouse in Qatar. We show that a high proportion of camels presenting for slaughter in Qatar show evidence for nasal MERS-CoV shedding (62/105. Sequence analysis showed the circulation of at least five different virus strains at these premises, suggesting that this location is a driver of MERS-CoV circulation and a high-risk area for human exposure. No correlation between RNA loads and levels of neutralizing antibodies was observed, suggesting limited immune protection and potential for reinfection despite previous exposure.

  7. Feasibility Study of Economics and Performance of Biomass Power Generation at the Former Farmland Industries Site in Lawrence, Kansas. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Tomberlin, G.; Mosey, G.

    2013-03-01

    Under the RE-Powering America's Land initiative, the U.S. Environmental Protection Agency (EPA) provided funding to the National Renewable Energy Laboratory (NREL) to support a feasibility study of biomass renewable energy generation at the former Farmland Industries site in Lawrence, Kansas. Feasibility assessment team members conducted a site assessment to gather information integral to this feasibility study. Information such as biomass resources, transmission availability, on-site uses for heat and power, community acceptance, and ground conditions were considered.

  8. Overexpression of a bacterial mercury transporter MerT in Arabidopsis enhances mercury tolerance.

    Science.gov (United States)

    Xu, Sheng; Sun, Bin; Wang, Rong; He, Jia; Xia, Bing; Xue, Yong; Wang, Ren

    2017-08-19

    The phytoremediation by using of green plants in the removal of environmental pollutant is an environment friendly, green technology that is cost effective and energetically inexpensive. By using Agrobacterium-mediated gene transfer, we generated transgenic Arabidopsis plants ectopically expressing mercuric transport protein gene (merT) from Pseudomonas alcaligenes. Compared with wild-type (WT) plants, overexpressing PamerT in Arabidopsis enhanced the tolerance to HgCl 2 . Further results showed that the enhanced total activities or corresponding transcripts of antioxidant enzymes, including superoxide dismutase (SOD), catalase (CAT) and guaiacol peroxidase (POD) were observed in transgenic Arabidopsis under HgCl 2 stress. These results were confirmed by the alleviation of oxidative damage, as indicated by the decrease of thiobarbituric acid reactive substances (TBARS) contents and reactive oxygen species (ROS) accumulation. In addition, localization analysis of PaMerT in Arabidopsis protoplast showed that it is likely to be associated with vacuole. In all, PamerT increased mercury (Hg) tolerance in transgenic Arabidopsis, and decreased production of Hg-induced ROS, thereby protecting plants from oxidative damage. The present study has provided further evidence that bacterial MerT plays an important role in the plant tolerance to HgCl 2 and in reducing the production of ROS induced by HgCl 2 . Copyright © 2017 Elsevier Inc. All rights reserved.

  9. Landing site rationality scaling for subsurface sampling on Mars—Case study for ExoMars Rover-like missions

    Science.gov (United States)

    Kereszturi, Akos

    2012-11-01

    Subsurface sampling will be important in the robotic exploration of Mars in the future, and this activity requires a somewhat different approach in landing site selection than earlier, surface analysis focused missions. In this work theoretical argumentation for the selection of ideal sites is summarized, including various parameters that were defined as examples for the earlier four candidate landing sites of Mars Science Laboratory. The aim here was to compare interesting sites; the decision on the final site does not affect this work. Analyzing the theoretical background, to identify ideal locations for subsurface analysis, several factors could be identified by remote sensing, including the dust and dune coverage, the cap layer distribution as well as the location of probable important outcrops. Beyond the fact that image based information on the rock hardness on Mars is lacking, more work would be also useful to put the interesting sites into global context and to understand the role of secondary cratering in age estimation. More laboratory work would be also necessary to improve our knowledge on the extraction and preservation of organic materials under different conditions. Beyond the theoretical argumentation mentioned above, the size and accessibility of possible important shallow subsurface materials were analyzed at the four earlier candidate landing sites of Mars Science Laboratory. At the sample terrains, interesting but inaccessible, interesting and sideward accessible, and interesting and from above accessible outcrops were identified. Surveying these outcrop types at the sample terrains, the currently available datasets showed only 3-9% of exposed strata over the entire analyzed area is present at Eberswalde and Holden crater, and individual outcrops have an average diameter between 100 and 400 m there. For Gale crater and Mawrth Valles region, these parameters were 46-35% of exposed strata, with an average outcrop diameter of ˜300 m. In the case

  10. Development of corrective measures and site stabilization technologies for shallow land burial facilities at semiarid sites: summary paper

    International Nuclear Information System (INIS)

    Nyhan, J.W.; Abeele, W.V.

    1987-01-01

    The overall purpose of the corrective measures task performed for the national Low-Level Waste Management Program (NLLWMP) has been to develop and test methods that can be used to correct any actual or anticipated problems with new and existing shallow land burial (SLB) sites in a semiarid environment. These field tests have not only evaluated remedial actions, but have also investigated phenomena suspected of being a possible problem at semiarid SLB sites. The approach the authors have taken in developing remedial action and site closure technologies for low-level waste sites is to recognize the physical and biological processes affecting site integrity are interdependent, and therefore, cannot be treated as separate problems. More specifically the field experiments performed for this task were to identify, evaluate, and model erosion control technologies, field test second generation biointrusion barriers, determine by field experiments the extent of upward radionuclide migration due to moisture cycling, and measure the effects of subsidence on remedial action of other system components. In the following sections of this final task summary report, the authors describe the progress made in establishing the facility in which many of these field experiments were performed, the Los Alamos Experimental Engineered Test Facility (EETF), as well as a brief description of the four research areas encompassed by this task. 45 references, 4 figures

  11. Exploration drilling and ecology. A contribution to the MER (Environmental Effect Report) of the NAM (Netherlands Petroleum Company) for the benefit of exploration drilling for natural gas in the Waddenzee and the North Sea coastal area

    International Nuclear Information System (INIS)

    Dankers, N.; Wintermans, G.J.M.

    1996-01-01

    Within the framework of the title drilling activities the NAM carries out a MER. Several research institutes were asked to contribute to the MER. The authors' institute was asked to describe the ecology of the exploration areas in the Wadden Sea, as well as the possible effects of the exploration drilling on the ecology. In this report only the impact for the Wadden Sea is dealt with. In chapter 1 the ecology of the Wadden Sea is discussed in detail for the subjects primary production (photosynthesis), secondary production (consumption of vegetable organic materials), birds, seals, and societal functions. In chapter 2 specific aspects of specific sites are outlined. In chapter 3 an overview (the so-called factor train) is given of the activities around the exploration drilling of the NAM in the Wadden Sea and the disturbances that can be the result of those activities. In chapter 4 the possible effects of exploration drilling on birds and seals are discussed for each drilling site

  12. Estimation of Community Land Model parameters for an improved assessment of net carbon fluxes at European sites

    Science.gov (United States)

    Post, Hanna; Vrugt, Jasper A.; Fox, Andrew; Vereecken, Harry; Hendricks Franssen, Harrie-Jan

    2017-03-01

    The Community Land Model (CLM) contains many parameters whose values are uncertain and thus require careful estimation for model application at individual sites. Here we used Bayesian inference with the DiffeRential Evolution Adaptive Metropolis (DREAM(zs)) algorithm to estimate eight CLM v.4.5 ecosystem parameters using 1 year records of half-hourly net ecosystem CO2 exchange (NEE) observations of four central European sites with different plant functional types (PFTs). The posterior CLM parameter distributions of each site were estimated per individual season and on a yearly basis. These estimates were then evaluated using NEE data from an independent evaluation period and data from "nearby" FLUXNET sites at 600 km distance to the original sites. Latent variables (multipliers) were used to treat explicitly uncertainty in the initial carbon-nitrogen pools. The posterior parameter estimates were superior to their default values in their ability to track and explain the measured NEE data of each site. The seasonal parameter values reduced with more than 50% (averaged over all sites) the bias in the simulated NEE values. The most consistent performance of CLM during the evaluation period was found for the posterior parameter values of the forest PFTs, and contrary to the C3-grass and C3-crop sites, the latent variables of the initial pools further enhanced the quality-of-fit. The carbon sink function of the forest PFTs significantly increased with the posterior parameter estimates. We thus conclude that land surface model predictions of carbon stocks and fluxes require careful consideration of uncertain ecological parameters and initial states.

  13. Novel chimeric virus-like particles vaccine displaying MERS-CoV receptor-binding domain induce specific humoral and cellular immune response in mice.

    Science.gov (United States)

    Wang, Chong; Zheng, Xuexing; Gai, Weiwei; Wong, Gary; Wang, Hualei; Jin, Hongli; Feng, Na; Zhao, Yongkun; Zhang, Weijiao; Li, Nan; Zhao, Guoxing; Li, Junfu; Yan, Jinghua; Gao, Yuwei; Hu, Guixue; Yang, Songtao; Xia, Xianzhu

    2017-04-01

    Middle East respiratory syndrome coronavirus (MERS-CoV) has continued spreading since its emergence in 2012 with a mortality rate of 35.6%, and is a potential pandemic threat. Prophylactics and therapies are urgently needed to address this public health problem. We report here the efficacy of a vaccine consisting of chimeric virus-like particles (VLP) expressing the receptor binding domain (RBD) of MERS-CoV. In this study, a fusion of the canine parvovirus (CPV) VP2 structural protein gene with the RBD of MERS-CoV can self-assemble into chimeric, spherical VLP (sVLP). sVLP retained certain parvovirus characteristics, such as the ability to agglutinate pig erythrocytes, and structural morphology similar to CPV virions. Immunization with sVLP induced RBD-specific humoral and cellular immune responses in mice. sVLP-specific antisera from these animals were able to prevent pseudotyped MERS-CoV entry into susceptible cells, with neutralizing antibody titers reaching 1: 320. IFN-γ, IL-4 and IL-2 secreting cells induced by the RBD were detected in the splenocytes of vaccinated mice by ELISpot. Furthermore, mice inoculated with sVLP or an adjuvanted sVLP vaccine elicited T-helper 1 (Th1) and T-helper 2 (Th2) cell-mediated immunity. Our study demonstrates that sVLP displaying the RBD of MERS-CoV are promising prophylactic candidates against MERS-CoV in a potential outbreak situation. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. Prevalence of comorbidities in the Middle East respiratory syndrome coronavirus (MERS-CoV): a systematic review and meta-analysis.

    Science.gov (United States)

    Badawi, Alaa; Ryoo, Seung Gwan

    2016-08-01

    The Middle East respiratory syndrome coronavirus (MERS-CoV) is associated with life-threatening severe illnesses and a mortality rate of approximately 35%, particularly in patients with underlying comorbidities. A systematic analysis of 637 MERS-CoV cases suggests that diabetes and hypertension are equally prevalent in approximately 50% of the patients. Cardiac diseases are present in 30% and obesity in 16% of the cases. These conditions down-regulate the synthesis of proinflammatory cytokines and impair the host's innate and humoral immune systems. In conclusion, protection against MERS-CoV and other respiratory infections can be improved if public health vaccination strategies are tailored to target persons with chronic disorders. Crown Copyright © 2016. Published by Elsevier Ltd. All rights reserved.

  15. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Sky Park Landfill Site in Eau Claire, Wisconsin. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Simon, J.; Mosey, G.

    2013-01-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Sky Park Landfill site in Eau Claire, Wisconsin, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  16. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Former Fort Ord Army Base Site in Marina, California. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Stoltenberg, B.; Konz, C.; Mosey, G.

    2013-05-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Former Fort Ord Army Base (FOAB) site in Marina, California, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  17. Reliable typing of MERS-CoV variants with a small genome fragment

    NARCIS (Netherlands)

    S.L. Smits (Saskia); V.S. Raj (Stalin); S.D. Pas (Suzan); C.B.E.M. Reusken (Chantal); K.A. Mohran (Khaled A.); E. Farag (Elmoubasher); H.E. Al Romaihi (Hamad); M.M. AlHajri (Mohd); B.L. Haagmans (Bart); M.P.G. Koopmans D.V.M. (Marion)

    2015-01-01

    textabstractBackground: Middle East Respiratory Syndrome coronavirus (. MERS-CoV) is an emerging pathogen that causes lower respiratory tract infection in humans. Camels are the likely animal source for zoonotic infection, although exact transmission modes remain to be determined. Human-to-human

  18. Exploring dust emission responses to land cover change using an ecological land classification

    Science.gov (United States)

    Galloza, Magda S.; Webb, Nicholas P.; Bleiweiss, Max P.; Winters, Craig; Herrick, Jeffrey E.; Ayers, Eldon

    2018-06-01

    Despite efforts to quantify the impacts of land cover change on wind erosion, assessment uncertainty remains large. We address this uncertainty by evaluating the application of ecological site concepts and state-and-transition models (STMs) for detecting and quantitatively describing the impacts of land cover change on wind erosion. We apply a dust emission model over a rangeland study area in the northern Chihuahuan Desert, New Mexico, USA, and evaluate spatiotemporal patterns of modelled horizontal sediment mass flux and dust emission in the context of ecological sites and their vegetation states; representing a diversity of land cover types. Our results demonstrate how the impacts of land cover change on dust emission can be quantified, compared across land cover classes, and interpreted in the context of an ecological model that encapsulates land management intensity and change. Results also reveal the importance of established weaknesses in the dust model soil characterisation and drag partition scheme, which appeared generally insensitive to the impacts of land cover change. New models that address these weaknesses, coupled with ecological site concepts and field measurements across land cover types, could significantly reduce assessment uncertainties and provide opportunities for identifying land management options.

  19. Siting, design and cost of shallow land burial facilities in northern New England. Volume 1

    International Nuclear Information System (INIS)

    1985-05-01

    This study investigated the technical feasibility and cost of shallow land burial (SLB) as one low-level radioactive waste disposal option for Maine and the northern New England states of Maine, New Hampshire, and Vermont. The results are presented in five chapters addressing the licensing process for an SLB facility, the siting process, the engineering design, the cost of disposal, and the cost of transportation. Chapter 2 reviews the Federal and State licensing processes and requirements for development of an SLB facility. Included in this discussion are the stages in the life cycle of SLB facility. Chapter 3 provides site selection criteria for Maine and presents a proposed site selection methodology. The site selection criteria are defined and the reasoning behind their selection is explained. Chapter 4 discusses SLB trench and facility designs and costs. To accommodate different waste volume scenarios, differently sized facilities are discussed, representing Maine going-it-alone and a northern New England compact. Designs and costs of scenarios including nuclear power plant decommissioning wastes are also discussed. Cost estimates of licensing, facility construction, operation, closure, and post closure care are presented for the different waste volume scenarios. Chapter 5 presents estimates of what it would cost LLW generators to dispose of their waste in a Maine-only or a northern New England shallow land burial facility. The reliability of the estimates and their sensitivity to changes in waste volume are also discussed. Chapter 6 examines transportation costs

  20. Hydrogeology and historical assessment of a classic sequential-land use landfill site, Illinois, U.S.A.

    Science.gov (United States)

    Booth, Colin J.; Vagt, Peter J.

    1990-05-01

    The Blackwell site in northeastern Illinois was a classic sequential-use project combining land reclamation, a sanitary landfill, and a recreational park. This paper adds a recent assessment of leachate generation and groundwater contamination to the site's unfinished record. Hydrogeological studies show that (1) the landfill sits astride an outwash aquifer and a till mound, which are separated from an underlying dolomite aquifer by a thin, silty till; (2) leachate leaks from the landfill at an estimated average rate between 48 and 78 m3/d; (3) the resultant contaminant plume is virtually stagnant in the till but rapidly diluted in the outwash aquifer, so that no off-site contamination is detected; (4) trace VOC levels in the dolomite probably indicate that contaminants have migrated there from the landfill-derived plume in the outwash. Deviations from the original landfill concepts included elimination of a leachate collection system, increased landfill size, local absence of a clay liner, and partial use of nonclay cover. The hydrogeological setting was unsuitable for the landfill as constructed, indicating the importance of detailed geological consideration in landfill and land-use planning.

  1. Antibodies against MERS coronavirus in dromedaries, United Arab Emirates, 2003 and 2013

    NARCIS (Netherlands)

    Meyer, Benjamin; Müller, Marcel A.; Corman, Victor M.; Reusken, Chantal B E M; Ritz, Daniel; Godeke, Gert Jan; Lattwein, Erik; Kallies, Stephan; Siemens, Artem; van Beek, Janko; Drexler, Jan F.; Muth, Doreen; Bosch, Berend Jan; Wernery, Ulrich; Koopmans, Marion P G; Wernery, Renate; Drosten, Christian

    2014-01-01

    Middle East respiratory syndrome coronavirus (MERS-CoV) has caused an ongoing outbreak of severe acute respiratory tract infection in humans in the Arabian Peninsula since 2012. Dromedary camels have been implicated as possible viral reservoirs. We used serologic assays to analyze 651 dromedary

  2. The clinical and virological features of the first imported case causing MERS-CoV outbreak in South Korea, 2015.

    Science.gov (United States)

    Lee, Ji Yeon; Kim, You-Jin; Chung, Eun Hee; Kim, Dae-Won; Jeong, Ina; Kim, Yeonjae; Yun, Mi-Ran; Kim, Sung Soon; Kim, Gayeon; Joh, Joon-Sung

    2017-07-14

    In 2015, the largest outbreak of Middle East respiratory syndrome coronavirus (MERS-CoV) infection outside the Middle East occurred in South Korea. We summarized the epidemiological, clinical, and laboratory findings of the first Korean case of MERS-CoV and analyzed whole-genome sequences of MERS-CoV derived from the patient. A 68-year-old man developed fever and myalgia 7 days after returning to Korea, following a 10-day trip to the Middle East. Before diagnosis, he visited 4 hospitals, potentially resulting in secondary transmission to 28 patients. On admission to the National Medical Center (day 9, post-onset of clinical illness), he presented with drowsiness, hypoxia, and multiple patchy infiltrations on the chest radiograph. He was intubated (day 12) because of progressive acute respiratory distress syndrome (ARDS) and INF-α2a and ribavirin treatment was commenced. The treatment course was prolonged by superimposed ventilator associated pneumonia. MERS-CoV PCR results converted to negative from day 47 and the patient was discharged (day 137), following rehabilitation therapy. The complete genome sequence obtained from a sputum sample (taken on day 11) showed the highest sequence similarity (99.59%) with the virus from an outbreak in Riyadh, Saudi Arabia, in February 2015. The first case of MERS-CoV infection had high transmissibility and was associated with a severe clinical course. The patient made a successful recovery after early treatment with antiviral agents and adequate supportive care. This first case in South Korea became a super-spreader because of improper infection control measures, rather than variations of the virus.

  3. Economic potential of alternative land and natural resource uses at the Nevada Test Site, Nye County, Nevada

    International Nuclear Information System (INIS)

    Richard-Haggard, K.

    1983-03-01

    The economic potentials of several alternative land uses at the Nevada Test Site (NTS) are estimated. Alternatives considered include mining, agriculture, grazing, and hunting. There are two known tungsten ore bodies located in the Oak Spring mining district. The economic potential of the reserves is estimated to be $42,840. It is also possible that there are other economic mineral resources on the NTS whose values are yet unknown. There are an estimated 5000 ha of agricultural land on the Test Site; the cash value of alfalfa grown on this acreage is approximately $564,030. The economic potential of grazing at the Test Site lies somewhere in the range of $10,340 to $41,220. The assumed annual worth of mule deer to hunters is $90,440. The gross potential of hunting at the NTS is probably somewhat higher if trophy species, game birds and fur-bearing animals are also considered. It should be noted that the above values indicate gross worth; no costs are included in the estimates

  4. Sero-prevalence of Middle East Respiratory Syndrome Coronavirus (MERS-CoV) specific antibodies in Dromedary Camels in Tabuk, Saudi Arabia.

    Science.gov (United States)

    Harrath, Rafik; Duhier, Faisel M Abu

    2018-04-16

    The Middle East Respiratory Syndrome Coronavirus (MERS-CoV) is a novel Coronavirus which was responsible of the first case of human acute respiratory syndrome in the Kingdom of Saudi Arabia (KSA), 2012. Dromedary camels are considered as potential reservoirs for the virus and seem to be the only animal host which may transmit the infection to human. Further studies are required to better understand the animal sources of zoonotic transmission route and the risks of this infection. A primary sero-prevalence study of MERS-CoV preexisting neutralizing antibodies in Dromedary camel serum was conducted in Tabuk, western north region of KSA, in order to assess the seopositivity of these animals and to explain their possible role in the transmission of the infection to Human. One hundred seventy one (171) serum samples were collected from healthy dromedary camels with different ages and genders in Tabuk city and tested for specific serum IgG by ELISA using the receptor-binding S1 subunits of spike proteins of MERS-CoV. 144 (84,21%) of the total camel sera shown the presence of protein-specific antibodies against MERS-CoV. These results may provide evidence that MERS-CoV has previously infected dromedary camels in Tabuk and may support the possible role of camels in the human infection. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

  5. The TAM-family receptor Mer mediates production of HGF through the RhoA-dependent pathway in response to apoptotic cells.

    Science.gov (United States)

    Park, Hyun-Jung; Baen, Ji-Yeon; Lee, Ye-Ji; Choi, Youn-Hee; Kang, Jihee Lee

    2012-08-01

    The TAM receptor protein tyrosine kinases Tyro3, Axl, and Mer play important roles in macrophage function. We investigated the roles of the TAM receptors in mediating the induction of hepatocyte growth factor (HGF) during the interaction of macrophages with apoptotic cells. Mer-specific neutralizing antibody, small interfering RNA (siRNA), and a recombinant Mer protein (Mer/Fc) inhibited HGF mRNA and protein expression, as well as activation of RhoA, Akt, and specific mitogen-activated protein (MAP) kinases in response to apoptotic cells. Inhibition of Axl or Tyro3 with specific antibodies, siRNA, or Fc-fusion proteins did not prevent apoptotic cell-induced HGF mRNA and protein expression and did not inhibit activation of the postreceptor signaling molecules RhoA and certain MAP kinases, including extracellular signal-regulated protein kinase and c-Jun NH(2)-terminal kinase. However, Axl- and Tyro3-specific blockers did inhibit the activation of Akt and p38 MAP kinase in response to apoptotic cells. In addition, none of the TAM receptors mediated the effects of apoptotic cells on transforming growth factor-β or epidermal growth factor mRNA expression. However, they were involved in the induction of vascular endothelial growth factor mRNA expression. Our data provide evidence that when macrophages interact with apoptotic cells, only Mer of the TAM-family receptors is responsible for mediating transcriptional HGF production through a RhoA-dependent pathway.

  6. Land-use changes on the proposed Clinch River Breeder Reactor demonstration. Project site: 1924 to 1972

    International Nuclear Information System (INIS)

    McConathy, R.K.

    1976-02-01

    A report is presented which documents the use history of the CRBRDP site and is also the first in a series to describe ecological areas on the ERDA Oak Ridge Reservation meeting criteria for scientific study sites or natural areas worthy of preservation. The CRBRDP area under discussion is located in Roane County, Tennessee and is a part of the land purchased in 1942 by the United States Government for the Manhattan Project, now known as the ERDA Oak Ridge Reservation

  7. Feasibility Study of Economics and Performance of Geothermal Power Generation at the Lakeview Uranium Mill Site in Lakeview, Oregon. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Hillesheim, M.; Mosey, G.

    2013-11-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Lakeview Uranium Mill site in Lakeview, Oregon, for a feasibility study of renewable energy production. The EPA contracted with the National Renewable Energy Laboratory (NREL) to provide technical assistance for the project. The purpose of this report is to describe an assessment of the site for possible development of a geothermal power generation facility and to estimate the cost, performance, and site impacts for the facility. In addition, the report recommends development pathways that could assist in the implementation of a geothermal power system at the site.

  8. Observations on the Morphology, Pollination and Cultivation of Coco de Mer (Lodoicea maldivica (J F Gmel. Pers., Palmae

    Directory of Open Access Journals (Sweden)

    Stephen Blackmore

    2012-01-01

    Full Text Available We present a range of observations on the reproductive morphology, pollination biology and cultivation of Lodoicea maldivica (coco de mer, an endangered species with great ecological, economic and cultural importance. We review the history of study of this charismatic species. Morphological studies of the male inflorescence indicate its importance as a year-round food source to the Seychelles fauna. In situ observations suggest a number of potential biotic and abiotic pollination mechanisms including bees, flies, slugs, and geckos; trigonid bees are identified as the most likely potential natural pollinator. We outline a successful programme for ex situ pollination, germination, and cultivation of the coco de mer, highlighting the importance of temperature, humidity and light levels as well as maintaining an undisturbed environment. In combination with continued protection and monitoring, this advice may aid the future in situ and ex situ conservation of the coco de mer.

  9. Soil Fertility in relation to Landscape Position and Land Use/Cover Types: A Case Study of the Lake Kivu Pilot Learning Site

    Directory of Open Access Journals (Sweden)

    Majaliwa Mwanjalolo Jackson-Gilbert

    2015-01-01

    Full Text Available This study determined the change and distribution of land-uses/covers along the landscape, and evaluated the nutrient status of the top soil layer in the Lake Kivu Pilot Learning Site (LKPLS benchmarked micro-catchments. Soil physical and chemical properties were quantified using triplicate soil samples collected from each land-use/cover at two depths (0–15 and 15–30 cm in three LK PLS Learning Innovation Platform (IP sites (Bufundi in Uganda, Mupfuni-Shanga in D.R. Congo, Gataraga in Rwanda. Small scale agriculture has increased in all the benchmarked micro-catchments at the expense of other land-uses/covers. In the settlement areas land-use/cover distribution along the landscape varied across sites and countries; the major one being eucalyptus woodlots, wetland, and perennials and annuals crops in Bufundi; annuals and perennials crops in Mupfuni-Shanga; and annuals crops in Gataraga. Perennial crops tended to occur at the footslope and valley bottoms, while the annuals occurred at the upper backslopes and summits. Available P and K were relatively higher and C/N ratio (7.28 was the lowest in Mupfuni Shanga. Annual crops had the lowest available P and N across site (P<0.05. The key nutrients N, P and K were below the critical values for plant growth for Bufundi.

  10. Dynamic temperature fields under Mars landing sites and implications for supporting microbial life.

    Science.gov (United States)

    Ulrich, Richard; Kral, Tim; Chevrier, Vincent; Pilgrim, Robert; Roe, Larry

    2010-01-01

    While average temperatures on Mars may be too low to support terrestrial life-forms or aqueous liquids, diurnal peak temperatures over most of the planet can be high enough to provide for both, down to a few centimeters beneath the surface for some fraction of the time. A thermal model was applied to the Viking 1, Viking 2, Pathfinder, Spirit, and Opportunity landing sites to demonstrate the dynamic temperature fields under the surface at these well-characterized locations. A benchmark temperature of 253 K was used as a lower limit for possible metabolic activity, which corresponds to the minimum found for specific terrestrial microorganisms. Aqueous solutions of salts known to exist on Mars can provide liquid solutions well below this temperature. Thermal modeling has shown that 253 K is reached beneath the surface at diurnal peak heating for at least some parts of the year at each of these landing sites. Within 40 degrees of the equator, 253 K beneath the surface should occur for at least some fraction of the year; and, within 20 degrees , it will be seen for most of the year. However, any life-form that requires this temperature to thrive must also endure daily excursions to far colder temperatures as well as periods of the year where 253 K is never reached at all.

  11. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Standard Chlorine of Delaware Superfund Site in Delaware City, Delaware. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Salasovich, J.; Geiger, J.; Mosey, G.; Healey, V.

    2013-06-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Standard Chlorine of Delaware site in Delaware City, Delaware, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  12. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Former Bethlehem Steel Plant Brownfield Site in Lackawanna, New York. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Salasovich, J.; Geiger, J.; Mosey, G.; Healey, V.

    2013-04-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Former Bethlehem Steel Plant site in Lackawanna, New York, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  13. Do religion and religiosity have anything to do with alcohol consumption patterns? Evidence from two fish landing sites on Lake Victoria Uganda.

    Science.gov (United States)

    Tumwesigye, Nazarius M; Atuyambe, Lynn; Kibira, Simon P S; Wabwire-Mangen, Fred; Tushemerirwe, Florence; Wagner, Glenn J

    2013-09-01

    Fish landing sites have high levels of harmful use of alcohol. This paper examines the role of religion and religiosity on alcohol consumption at two fish landing sites on Lake Victoria in Uganda. Questionnaires were administered to randomly selected people at the sites. Dependent variables included alcohol consumption during the previous 30 days, whereas the key independent variables were religion and religiosity. Bivariate and multivariate analysis techniques were applied. People reporting low religiosity were five times more likely to have consumed alcohol (95% confidence interval: 2.45-10.04) compared with those reporting low/average religiosity. Religion and religiosity are potential channels for controlling alcohol use.

  14. The effects of downwelling radiance on MER surface spectra: the evil that atmospheres do

    Science.gov (United States)

    Wolff, M.; Ghosh, A.; Arvidson, R.; Christensen, P.; Guinness, E.; Ruff, S.; Seelos, F.; Smith, M.; Athena Science

    2004-11-01

    While it may not be surprising to some that downwelling radiation in the martian atmosphere may contribute a non-negligible fraction of the radiance for a given surface scene, others remain shocked and surprised (and often dismayed) to discover this fact; particularly with regard to mini-TES observations. Naturally, the relative amplitude of this sky ``contamination'' is often a complicated function of meteorological conditions, viewing geometry, surface properties, and (for the IR) surface temperature. Ideally, one would use a specialized observations to mimic the actual hemispherical-directional nature of the problem. Despite repeated attempts to obtain Pancam complete sky observations and mini-TES sky octants, such observations are not available in the MER observational database. As a result, one is left with the less-enviable, though certainly more computationally intensive, task of connecting point observations (radiance and derived meteorological parameters) to a hemispherical integral of downwelling radiance. Naturally, one must turn to a radiative transfer analysis, despite oft-repeated attempts to assert otherwise. In our presentation, we offer insight into the conditions under which one must worry about atmospheric removal, as well as semi-empirical approaches (based upon said radiative transfer efforts) for producing the correction factors from the available MER atmospheric observations. This work is proudly supported by the MER program through NASA/JPL Contract No. 1242889 (MJW), as well as the contracts for the co-authors.

  15. Vertical Distribution of Total Mercury and Mercury Methylation in a Landfill Site in Japan

    Directory of Open Access Journals (Sweden)

    Jing Yang

    2018-06-01

    Full Text Available Mercury is a neurotoxin, with certain organic forms of the element being particularly harmful to humans. The Minamata Convention was adopted to reduce the intentional use and emission of mercury. Because mercury is an element, it cannot be decomposed. Mercury-containing products and mercury used for various processes will eventually enter the waste stream, and landfill sites will become a mercury sink. While landfill sites can be a source of mercury pollution, the behavior of mercury in solid waste within a landfill site is still not fully understood. The purpose of this study was to determine the depth profile of mercury, the levels of methyl mercury (MeHg, and the factors controlling methylation in an old landfill site that received waste for over 30 years. Three sampling cores were selected, and boring sampling was conducted to a maximum depth of 18 m, which reached the bottom layer of the landfill. Total mercury (THg and MeHg were measured in the samples to determine the characteristics of mercury at different depths. Bacterial species were identified by 16S rRNA amplification and sequencing, because the methylation process is promoted by a series of genes. It was found that the THg concentration was 19–975 ng/g, with a geometric mean of 298 ng/g, which was slightly less than the 400 ng/g concentration recorded 30 years previously. In some samples, MeHg accounted for up to 15–20% of THg, which is far greater than the general level in soils and sediments, although the source of MeHg was unclear. The genetic data indicated that hgcA was present mostly in the upper and lower layers of the three cores, merA was almost as much as hgcA, while the level of merB was hundreds of times less than those of the other two genes. A significant correlation was found between THg and MeHg, as well as between MeHg and MeHg/THg. In addition, a negative correlation was found between THg and merA. The coexistence of the three genes indicated that both

  16. USING LANDSAT IMAGES AND GIS TO ASSESS THE CHANGES OF MER DE GLACE AND MARMOLADA GLACIERS, IN THE LAST THREE DECADES

    Directory of Open Access Journals (Sweden)

    M. M. NISTOR

    2014-06-01

    Full Text Available Using Landsat Images and GIS to Assess the Changes of Mer de Glace and Marmolada Glaciers, in the Last Three Decades. We have demonstrated that Mer de Glace Glacier (GL and Marmolada GL are in continuous retreat. The changes in size and status of terminus points were estimated in various time intervals by satellite images (SIs and Geographic Information Systems (GIS techniques, during the last three decades. The aim of the research was to found the value of the ice melting areas of Mer de Glace GL and Marmolada GL and to calculate the decline rate for both GLs. A large number of GLs have lost ice mass all over the world. Often glaciologists monitor the GLs movements under climate changes and they express their opinions about the ocean level rise, ecosystem challenges and the future implications of GLs decline. The analysed information to quantify the Mer de Glace GL and Marmolada GL areas derived from SIs. By manual vectorization we obtained the outlines of GLs in different years. For 1984, 1999, 2013 we defined the limits for Mer de Glace GL and for 1986, 1999, 2013 we defined the limits for Marmolada GL. These vector layers were compared in order to observe the melting area and to establish the withdrawal rate. The first results indicate that Mer de Glace GL area declined by 2.365 km² between 1984 and 2013 and a mean melting rate of 0.082 km²/year was obtained. Marmolada GL decreased by 1.035 km² between 1986 and 2013 and a mean melting rate of 0.038 km²/year was calculated. We believe that these results represent significant quantitative data about GLs movements regarding two different areas in the Alps Range and may provide knowledge for hydrology, geomorphology and environmental sciences.

  17. The effects of sampling on the efficiency and accuracy of k-mer indexes: Theoretical and empirical comparisons using the human genome.

    Science.gov (United States)

    Almutairy, Meznah; Torng, Eric

    2017-01-01

    One of the most common ways to search a sequence database for sequences that are similar to a query sequence is to use a k-mer index such as BLAST. A big problem with k-mer indexes is the space required to store the lists of all occurrences of all k-mers in the database. One method for reducing the space needed, and also query time, is sampling where only some k-mer occurrences are stored. Most previous work uses hard sampling, in which enough k-mer occurrences are retained so that all similar sequences are guaranteed to be found. In contrast, we study soft sampling, which further reduces the number of stored k-mer occurrences at a cost of decreasing query accuracy. We focus on finding highly similar local alignments (HSLA) over nucleotide sequences, an operation that is fundamental to biological applications such as cDNA sequence mapping. For our comparison, we use the NCBI BLAST tool with the human genome and human ESTs. When identifying HSLAs, we find that soft sampling significantly reduces both index size and query time with relatively small losses in query accuracy. For the human genome and HSLAs of length at least 100 bp, soft sampling reduces index size 4-10 times more than hard sampling and processes queries 2.3-6.8 times faster, while still achieving retention rates of at least 96.6%. When we apply soft sampling to the problem of mapping ESTs against the genome, we map more than 98% of ESTs perfectly while reducing the index size by a factor of 4 and query time by 23.3%. These results demonstrate that soft sampling is a simple but effective strategy for performing efficient searches for HSLAs. We also provide a new model for sampling with BLAST that predicts empirical retention rates with reasonable accuracy by modeling two key problem factors.

  18. Characterization of the particle radiation environment at three potential landing sites on Mars using ESA’s MEREM models

    Science.gov (United States)

    McKenna-Lawlor, S.; Gonçalves, P.; Keating, A.; Morgado, B.; Heynderickx, D.; Nieminen, P.; Santin, G.; Truscott, P.; Lei, F.; Foing, B.; Balaz, J.

    2012-03-01

    The ‘Mars Energetic Radiation Environment Models’ (dMEREM and eMEREM) recently developed for the European Space Agency are herein used to estimate, for the first time, background Galactic Cosmic Ray (GCR) radiation and flare related solar energetic particle (SEP) events at three candidate martian landing sites under conditions where particle arrival occurred at solar minimum (December, 2006) and solar maximum (April, 2002) during Solar Cycle 23. The three landing sites were selected on the basis that they are characterized by significantly different hydrological conditions and soil compositions. Energetic particle data sets recorded on orbit at Mars at the relevant times were incomplete because of gaps in the measurements due to operational constraints. Thus, in the present study, comprehensive near-Earth particle measurements made aboard the GOES spacecraft were used as proxies to estimate the overall particle doses at each perspective landing site, assuming in each case that the fluxes fell off as 1/r2 (where r is the helio-radial distance) and that good magnetic connectivity always prevailed. The results indicate that the particle radiation environment on Mars can vary according to the epoch concerned and the landing site selected. Particle estimations obtained using MEREM are in reasonable agreement, given the inherent differences between the models, with the related NASA Heavy Ion-Nucleon Transport Code for Space Radiation/HZETRN. Both sets of results indicated that, for short (30 days) stays, the atmosphere of Mars, in the cases of the SEPs studied and the then prevailing background galactic cosmic radiation, provided sufficient shielding at the planetary surface to maintain annual skin and blood forming organ/BFO dose levels below currently accepted ionizing radiation exposure limits. The threat of occurrence of a hard spectrum SEP during Cruise-Phase transfers to/from Mars over 400 days, combined with the associated cumulative effect of prolonged GCR

  19. Effect of the antiestrogen ethamoxytriphetol (MER-25) on placental low density lipoprotein uptake and degradation in baboons

    International Nuclear Information System (INIS)

    Henson, M.C.; Babischkin, J.S.; Pepe, G.J.; Albrecht, E.D.

    1988-01-01

    The present study determined if the decline in placental progesterone (P4) production that results from administration of the antiestrogen ethamoxytriphetol (MER-25) to pregnant baboons results from a change in placental low density lipoprotein (LDL) uptake and/or degradation. Pregnant baboons (Papio anubis) were untreated (n = 10) or received MER-25 (25 mg/kg BW, orally; n = 10) daily on days 140-170 of gestation (term, 184 days). Placentas were removed by cesarean section on day 170 of gestation, and villous tissue was dispersed with 0.1% collagenase at 37 C for 40 min. Placental cells (10(6)) were incubated in medium 199 (pH 7.2) for 12 h at 37 C with increasing amounts (5-100 micrograms) of [125I]LDL, with or without a 100-fold excess of unlabeled baboon LDL. Mean (+/- SE) peripheral serum P4 concentrations on days 140-170 of gestation were 51% lower (P less than 0.01) in MER-25-treated (5.7 +/- 0.3 ng/ml) than in untreated (11.6 +/- 0.5 ng/ml) baboons. The uptake of LDL was 56% lower (P less than 0.01) in placental cells from antiestrogen-treated (6.3 +/- 1.6 ng/micrograms cell protein) than in those from untreated (14.4 +/- 1.9 ng/micrograms cell protein) baboons. The dissociation constants for placental LDL uptake, as assessed by Scatchard analysis, however, were similar in untreated (0.80 microgram/ml) and MER-25-treated (0.76 microgram/ml) animals. The amount of [125I]LDL concomitantly degraded by cells from baboons that received MER-25 was 54% of that degraded by cells from untreated controls. The relative decline in LDL degradation by cells of antiestrogen-treated baboons was proportionate to the decline in overall LDL uptake. The results indicate, therefore, that antiestrogen treatment decreased the amount of placental LDL uptake, but did not change the affinity for the lipoprotein

  20. Effect of the antiestrogen ethamoxytriphetol (MER-25) on placental low density lipoprotein uptake and degradation in baboons

    Energy Technology Data Exchange (ETDEWEB)

    Henson, M.C.; Babischkin, J.S.; Pepe, G.J.; Albrecht, E.D.

    1988-05-01

    The present study determined if the decline in placental progesterone (P4) production that results from administration of the antiestrogen ethamoxytriphetol (MER-25) to pregnant baboons results from a change in placental low density lipoprotein (LDL) uptake and/or degradation. Pregnant baboons (Papio anubis) were untreated (n = 10) or received MER-25 (25 mg/kg BW, orally; n = 10) daily on days 140-170 of gestation (term, 184 days). Placentas were removed by cesarean section on day 170 of gestation, and villous tissue was dispersed with 0.1% collagenase at 37 C for 40 min. Placental cells (10(6)) were incubated in medium 199 (pH 7.2) for 12 h at 37 C with increasing amounts (5-100 micrograms) of (125I)LDL, with or without a 100-fold excess of unlabeled baboon LDL. Mean (+/- SE) peripheral serum P4 concentrations on days 140-170 of gestation were 51% lower (P less than 0.01) in MER-25-treated (5.7 +/- 0.3 ng/ml) than in untreated (11.6 +/- 0.5 ng/ml) baboons. The uptake of LDL was 56% lower (P less than 0.01) in placental cells from antiestrogen-treated (6.3 +/- 1.6 ng/micrograms cell protein) than in those from untreated (14.4 +/- 1.9 ng/micrograms cell protein) baboons. The dissociation constants for placental LDL uptake, as assessed by Scatchard analysis, however, were similar in untreated (0.80 microgram/ml) and MER-25-treated (0.76 microgram/ml) animals. The amount of (125I)LDL concomitantly degraded by cells from baboons that received MER-25 was 54% of that degraded by cells from untreated controls. The relative decline in LDL degradation by cells of antiestrogen-treated baboons was proportionate to the decline in overall LDL uptake. The results indicate, therefore, that antiestrogen treatment decreased the amount of placental LDL uptake, but did not change the affinity for the lipoprotein.

  1. Land Competition and Land-Use Change:

    DEFF Research Database (Denmark)

    Vongvisouk, Thoumthone

    Land competition and land-use changes are taking place in many developing countries as the demand for land increases. These changes are leading to changes in the livelihood conditions of rural people. The Government of Laos (GoL), on the one hand, aims to increase forest protection. On the other...... hand, the government is also working to increase national economic growth by promoting private-sector investment in both agriculture and forest resources – two sectors that compete for the same areas intended for protection. This thesis explores how these contradictory drivers of land-use changes...... software. Quantitative data was compiled in a Microsoft Access database and analyzed in Excel. Land-use and livelihood changes are taking place rapidly in the study sites. Overall, land-use change underwent transformation away from subsistence shifting cultivation to cash crops, intensive agriculture...

  2. Real-time sequence-validated loop-mediated isothermal amplification assays for detection of Middle East respiratory syndrome coronavirus (MERS-CoV.

    Directory of Open Access Journals (Sweden)

    Sanchita Bhadra

    Full Text Available The Middle East respiratory syndrome coronavirus (MERS-CoV, an emerging human coronavirus, causes severe acute respiratory illness with a 35% mortality rate. In light of the recent surge in reported infections we have developed asymmetric five-primer reverse transcription loop-mediated isothermal amplification (RT-LAMP assays for detection of MERS-CoV. Isothermal amplification assays will facilitate the development of portable point-of-care diagnostics that are crucial for management of emerging infections. The RT-LAMP assays are designed to amplify MERS-CoV genomic loci located within the open reading frame (ORF1a and ORF1b genes and upstream of the E gene. Additionally we applied one-step strand displacement probes (OSD for real-time sequence-specific verification of LAMP amplicons. Asymmetric amplification effected by incorporating a single loop primer in each assay accelerated the time-to-result of the OSD-RT-LAMP assays. The resulting assays could detect 0.02 to 0.2 plaque forming units (PFU (5 to 50 PFU/ml of MERS-CoV in infected cell culture supernatants within 30 to 50 min and did not cross-react with common human respiratory pathogens.

  3. MERS-CoV: Middle East respiratory syndrome corona virus: Can radiology be of help? Initial single center experience

    OpenAIRE

    Hamimi, Ahmed

    2016-01-01

    Human infection with a novel coronavirus named Middle East respiratory syndrome coronavirus (MERS-CoV) was first identified in Saudi Arabia and the Middle East in September, 2012. The aim of this study was to establish the most pathognomonic radiological sign(s) to diagnose MERS CoV. Patients and methods: This is a retrospective descriptive study. All patients were subjected to serial X-ray. High resolution non-contrast CT chest was also obtained for 10 patients. The scans were reviewed fo...

  4. Computational modeling of the bat HKU4 coronavirus 3CLpro inhibitors as a tool for the development of antivirals against the emerging Middle East respiratory syndrome (MERS) coronavirus.

    Science.gov (United States)

    Abuhammad, Areej; Al-Aqtash, Rua'a A; Anson, Brandon J; Mesecar, Andrew D; Taha, Mutasem O

    2017-11-01

    The Middle East respiratory syndrome coronavirus (MERS-CoV) is an emerging virus that poses a major challenge to clinical management. The 3C-like protease (3CL pro ) is essential for viral replication and thus represents a potential target for antiviral drug development. Presently, very few data are available on MERS-CoV 3CL pro inhibition by small molecules. We conducted extensive exploration of the pharmacophoric space of a recently identified set of peptidomimetic inhibitors of the bat HKU4-CoV 3CL pro . HKU4-CoV 3CL pro shares high sequence identity (81%) with the MERS-CoV enzyme and thus represents a potential surrogate model for anti-MERS drug discovery. We used 2 well-established methods: Quantitative structure-activity relationship (QSAR)-guided modeling and docking-based comparative intermolecular contacts analysis. The established pharmacophore models highlight structural features needed for ligand recognition and revealed important binding-pocket regions involved in 3CL pro -ligand interactions. The best models were used as 3D queries to screen the National Cancer Institute database for novel nonpeptidomimetic 3CL pro inhibitors. The identified hits were tested for HKU4-CoV and MERS-CoV 3CL pro inhibition. Two hits, which share the phenylsulfonamide fragment, showed moderate inhibitory activity against the MERS-CoV 3CL pro and represent a potential starting point for the development of novel anti-MERS agents. To the best of our knowledge, this is the first pharmacophore modeling study supported by in vitro validation on the MERS-CoV 3CL pro . MERS-CoV is an emerging virus that is closely related to the bat HKU4-CoV. 3CL pro is a potential drug target for coronavirus infection. HKU4-CoV 3CL pro is a useful surrogate model for the identification of MERS-CoV 3CL pro enzyme inhibitors. dbCICA is a very robust modeling method for hit identification. The phenylsulfonamide scaffold represents a potential starting point for MERS coronavirus 3CL pro inhibitors

  5. Technology development for the design of shallow land burial facilities at arid sites

    International Nuclear Information System (INIS)

    Nyhan, J.W.; Abeele, W.V.; Cokal, E.J.; Perkins, B.A.; Lane, L.J.

    1984-01-01

    The field research program involving technology development for arid shallow land burial (SLB) sites is described. Field tests of biointrusion barriers at waste disposal sites and in experimental plots at Los Alamos are reported. Results of completed and on-going experiments with migration barriers for water and contaminant movement are presented. An envelope wick experiment for subsurface water management is described, and preliminary field data are reported. An integrated field experiment was designed to test individual SLB component tests related to erosion control, biobarriers, and subsurface capillary and migration barriers, and the progress made in emplacing the experiment is presented. Efforts to utilize the field data collected to validate hydrologic models (TRACR3D) important to waste management strategies are also presented. 11 references, 14 figures, 1 table

  6. Development of corrective measures technology for shallow land burial facilities at arid sites

    International Nuclear Information System (INIS)

    Nyhan, J.W.; Abeele, W.V.; Perkins, B.A.; Lane, L.J.

    1984-01-01

    The field research program involving corrective measure technologies for arid shallow land burial (SLB) sites is described. Soil erosion and infiltration of water into a simulated trench cap with various surface treatments was measured and compared with similar data from agricultural systems across the United States. Field testing of biointrustion barriers at closed-out waste disposal sites at Los Alamos and in the experimental clusters are reported. The final results of an experiment designed to measure the extent of contaminant transport to the surface of a SLB facility, and the influence of plants on this relationship, are presented. An experiment designed to determine the effects of subsidence on the performance of a cobble-gravel biobarrier system is described and current field data are presented. 11 references, 11 figures, 5 tables

  7. Land and water use characteristics in the vicinity of the Savannah River Site

    Energy Technology Data Exchange (ETDEWEB)

    Hamby, D.M.

    1991-03-01

    Routine operations at the Savannah River Site (SRS) result in the release of small amounts of radionuclides to the atmosphere and to the Savannah River. The resulting radiological doses to the offsite maximum individual and the offsite population within 50 miles of the SRS are estimated on a yearly basis. These estimates are generated using dose models prescribed for the commercial nuclear power industry by the Nuclear Regulatory Commission (NRC). The NRC provides default values for dose model parameters for facilities not having enough data to develop site-specific values. A survey of land and water use characteristics for the Savannah River area has been conducted to determine as many site-specific values as possible for inclusion in the dose models used at the SRS. These site parameters include local characteristics of meat, milk, and vegetable production; river recreational activities; and meat, milk, and vegetable consumption rates. The report that follows describes the origin of the NRC default values, the methodology for deriving regional data, the results of the study, and the derivations of region-specific usage and consumption rates. 33 refs., 3 figs., 8 tabs.

  8. Small RNA analysis in Petunia hybrida identifies unusual tissue-specific expression patterns of conserved miRNAs and of a 24mer RNA

    Science.gov (United States)

    Tedder, Philip; Zubko, Elena; Westhead, David R.; Meyer, Peter

    2009-01-01

    Two pools of small RNAs were cloned from inflorescences of Petunia hybrida using a 5′-ligation dependent and a 5′-ligation independent approach. The two libraries were integrated into a public website that allows the screening of individual sequences against 359,769 unique clones. The library contains 15 clones with 100% identity and 53 clones with one mismatch to miRNAs described for other plant species. For two conserved miRNAs, miR159 and miR390, we find clear differences in tissue-specific distribution, compared with other species. This shows that evolutionary conservation of miRNA sequences does not necessarily include a conservation of the miRNA expression profile. Almost 60% of all clones in the database are 24-nucleotide clones. In accordance with the role of 24mers in marking repetitive regions, we find them distributed across retroviral and transposable element sequences but other 24mers map to promoter regions and to different transcript regions. For one target region we observe tissue-specific variation of matching 24mers, which demonstrates that, as for 21mers, 24mer concentrations are not necessarily identical in different tissues. Asymmetric distribution of a putative novel miRNA in the two libraries suggests that the cloning method can be selective for the representation of certain small RNAs in a collection. PMID:19369427

  9. LANDSAFE: LANDING SITE RISK ANALYSIS SOFTWARE FRAMEWORK

    OpenAIRE

    Schmidt, Ralph; Bostelmann, Jonas; Cornet, Yves; Heipke, Christian; Philippe, Christian; Poncelet, Nadia; de Rosa, Diego; Vandeloise, Yannick

    2012-01-01

    The European Space Agency (ESA) is planning a Lunar Lander mission in the 2018 timeframe that will demonstrate precise soft landing at the polar regions of the Moon. To ensure a safe and successful landing a careful risk analysis has to be carried out. This is comprised of identifying favorable target areas and evaluating the surface conditions in these areas. Features like craters, boulders, steep slopes, rough surfaces and shadow areas have to be identified in order to assess the risk assoc...

  10. A conservative region of the mercuric reductase gene (merA) as a molecular marker of bacterial mercury resistance Região conservada do gene da mercúrio redutase (merA) como marcador molecular da resistência bacteriana ao mercúrio

    OpenAIRE

    Adriana Sotero-Martins; Michele Silva de Jesus; Michele Lacerda; Josino Costa Moreira; Ana Luzia Lauria Filgueiras; Paulo Rubens Guimarães Barrocas

    2008-01-01

    The most common bacterial mercury resistance mechanism is based on the reduction of Hg(II) to Hg0, which is dependent of the mercuric reductase enzyme (MerA) activity. The use of a 431 bp fragment of a conservative region of the mercuric reductase (merA) gene was applied as a molecular marker of this mechanism, allowing the identification of mercury resistant bacterial strains.O mecanismo de resistência bacteriana ao mercúrio mais comum é baseada na redução do Hg(II) a Hg0, através da ativida...

  11. Human Infection with MERS coronavirus after exposure to infected camels, Saudi Arabia, 2013

    NARCIS (Netherlands)

    Memish, Ziad A.; Cotten, Matthew; Meyer, Benjamin; Watson, Simon J.; Alsahafi, Abdullah J.; Al Rabeeah, Abdullah A.; Corman, Victor Max; Sieberg, Andrea; Makhdoom, Hatem Q.; Assiri, Abdullah; Al Masri, Malaki; Aldabbagh, Souhaib; Bosch, Berend Jan|info:eu-repo/dai/nl/273306049; Beer, Martin; Müller, Marcel A.; Kellam, Paul; Drosten, Christian

    2014-01-01

    We investigated a case of human infection with Middle East respiratory syndrome coronavirus (MERS-CoV) after exposure to infected camels. Analysis of the whole human-derived virus and 15% of the camel-derived virus sequence yielded nucleotide polymorphism signatures suggestive of cross-species

  12. METEO-P/H: Measuring ambient pressure and relative humidity on the ExoMars 2020 landing site

    Science.gov (United States)

    Nikkanen, T. T.; Genzer, M.; Hieta, M.; Harri, A.-M.; Haukka, H.; Polkko, J.; Kynkäänniemi, T.

    2017-09-01

    Finnish Meteorological Institute (FMI) has designed and is in the process of building and testing a pressure and humidity measurement device for the ExoMars 2020 lander. The ExoMars 2020 mission consists of the Russian Roscosmos Surface Platform (SP) and the European Space Agency (ESA) Rover. The Surface Platform will perform the Entry, Descent and Landing for the lander combo and start stationary science operations after landing, while the Rover will drive off the SP to explore the landing site surroundings and soil. The FMI measurement device is installed on the Surface Platform to give continuous measurements from a stationary location. The METEO-P pressure device and METEO-H humidity device are part of the METEO meteorological science package, which also includes a thermometer and an anemometer from IKI, Russia, as well as the RDM Radiation and dust sensors, and the AMR magnetic field sensors from INTA, Spain.

  13. Feasibility Study of Biopower in East Helena, Montana. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Moriarty, K.

    2013-02-01

    The U.S. Environmental Protection Agency (EPA) developed the RE-Powering America's Land initiative to reuse contaminated sites for renewable energy generation when aligned with the community's vision for the site. The former American Smelting and Refining Company (Asarco) smelter in East Helena, Montana, was selected for a feasibility study under the initiative. Biomass was chosen as the renewable energy resource based on the wood products industry in the area. Biopower was selected as the technology based on Montana's renewable portfolio standard (RPS) requiring utilities to purchase renewable power.

  14. Land Use and Land Cover Change in Sagarmatha National Park, a World Heritage Site in the Himalayas of Eastern Nepal

    Directory of Open Access Journals (Sweden)

    Rodney Garrard

    2016-08-01

    Full Text Available Land use and land cover (LULC changes that occurred during 1992–2011 in Sagarmatha National Park, a United Nations Educational, Scientific, and Cultural Organization World Heritage Site in the Himalayas of eastern Nepal, were evaluated using multitemporal satellite imagery in combination with land use data and sociological information gathered from semistructured interviews and workshops. We asked study participants about LULC changes, the causes of each change, and the likely duration of its effects, and used this information to produce high-resolution maps of local perceptions of LULC change. Satellite image analysis revealed that above 6000 m there has been a decrease in the area covered by snow and ice and a consequent expansion of glacial lakes and areas covered by rock and soil. Between 3000 and 6000 m, forest and farmland are decreasing, and areas under grazing, settlement, and shrubland are increasing. Such LULC changes within the protected area clearly indicate the prevailing danger of land degradation. Results from the interviews and workshops suggest that people tended to detect LULC change that was acute and direct, but were less aware of slower changes that could be identified by satellite imagery analysis. Most study participants said that land use changes were a result of rapid economic development and the consequent pressure on natural resources, especially in the tourism industry and especially below 6000 m elevation, as well as limitations to protected area management and a period of civil war. Human influence coupled with climate change may explain the changes at higher elevations, whereas anthropogenic activities are solely responsible in lower areas. Although global factors cannot be mitigated locally, many of the local drivers of LULC change could be addressed with improved management practices that aid local conservation and development in this high mountain ecosystem. A broader interdisciplinary approach to LULC change

  15. Identification and Characterization of the landing site of Philae from OSIRIS-NAC Images

    Science.gov (United States)

    Lamy, P.; Faury, G.; Jorda, L.; Romeuf, D.; Gaskell, R.; Jurado, E.; Garmier, R.; Llebaria, A.; Auger, A.-T.; Capanna, C.

    2015-10-01

    On 12 November 2014, Philae rebounded from its first touchdown at the selected Agilka "J" site on the nucleus of Comet 67P/Churyumov-Gerasimenko, an event captured by the Rosetta's OSIRIS narrowangle camera (NAC [1]). Following two additional bounces, Philae finally landed at the "K" site later named Abydos. Finding its exact location has been a major challenge and could only be indirectly constrained. Thanks to CONSERT measurements, it was finally possible to bound it by an ellipse of approximately 16 x 160 meters. Complementary analyses were performed at CNES-SONC allowing narrowing down the location of Philae to an area of approximately 10 m radius based on illumination conditions and times of contact between Orbiter and Lander during operations. A more precise localization is however hampered by the uncertainties affecting the present 3-dimensional reconstruction (DTM) of the area, presently at the limit of the illuminated part of the nucleus (Figure 1). Spotting Philae on the images of the nucleus has been even more challenging. The highest resolution images of the region of interest after Philae's landing were obtained by the OSIRIS-NAC in mid-December 2014 at a distance of approximately 20 km, the image scale implying that Philae would at best appear as a few bright pixels. Bright "spots" are however ubiquitous on the surface of the nucleus, from glittering rocks or from local icy patches [2]. After meticulously scanning the region of interest, several candidates were spotted but the ambiguity could only be removed when a pre-landing image of the OSIRIS- NAC collection was identified whose geometric conditions (illumination and viewing) were very similar to one of the post-landing images of 12 December 2014. Although taken at different spatial resolutions, all topographic details match, except for one bright spot present on the post-landing image as shown in Figure 2. A false detection or an artefact have been ruled out as this candidate was successfully

  16. In situ gamma-ray spectrometric analysis of radionuclide distributions at a commercial shallow land burial site

    International Nuclear Information System (INIS)

    Kirby, L.J.; Campbell, R.M.

    1984-10-01

    Gamma-ray spectrometric analysis conducted at the Maxey Flats, Kentucky (USA) shallow land burial site confirmed that the waste radionuclides have been retained largely within the restricted area of the burial site. Concentrations of 137 Cs and 60 Co were comparable with those originating from global fallout and lower than concentrations measured in several other areas having similar rainfall. In-situ spectrometric analyses, corroborated by soil sample and vegetation analyses, indicate that the site has influenced 60 Co levels slightly in the west drainage channel, but 137 Cs did not originate from the site. Concentrations of 60 Co, 90 Sr and 137 Cs determined in subsurface soils by well logging techniques confirmed that subsurface migration of waste-derived radionuclides to points outside the restricted area has not been a significant source of contamination of the environs adjacent to the site. 8 references, 8 figures

  17. Conceptual Design and Architecture of Mars Exploration Rover (MER) for Seismic Experiments Over Martian Surfaces

    Science.gov (United States)

    Garg, Akshay; Singh, Amit

    2012-07-01

    Keywords: MER, Mars, Rover, Seismometer Mars has been a subject of human interest for exploration missions for quite some time now. Both rover as well as orbiter missions have been employed to suit mission objectives. Rovers have been preferentially deployed for close range reconnaissance and detailed experimentation with highest accuracy. However, it is essential to strike a balance between the chosen science objectives and the rover operations as a whole. The objective of this proposed mechanism is to design a vehicle (MER) to carry out seismic studies over Martian surface. The conceptual design consists of three units i.e. Mother Rover as a Surrogate (Carrier) and Baby Rovers (two) as seeders for several MEMS-based accelerometer / seismometer units (Nodes). Mother Rover can carry these Baby Rovers, having individual power supply with solar cells and with individual data transmission capabilities, to suitable sites such as Chasma associated with Valles Marineris, Craters or Sand Dunes. Mother rover deploys these rovers in two opposite direction and these rovers follow a triangulation pattern to study shock waves generated through firing tungsten carbide shells into the ground. Till the time of active experiments Mother Rover would act as a guiding unit to control spatial spread of detection instruments. After active shock experimentation, the babies can still act as passive seismometer units to study and record passive shocks from thermal quakes, impact cratering & landslides. Further other experiments / payloads (XPS / GAP / APXS) can also be carried by Mother Rover. Secondary power system consisting of batteries can also be utilized for carrying out further experiments over shallow valley surfaces. The whole arrangement is conceptually expected to increase the accuracy of measurements (through concurrent readings) and prolong life cycle of overall experimentation. The proposed rover can be customised according to the associated scientific objectives and further

  18. Magnetism and the interior of the moon. [measured at Apollo landing sites

    Science.gov (United States)

    Dyal, P.; Parkin, C. W.; Daily, W. D.

    1974-01-01

    During the time period 1961-1972 eleven magnetometers were sent to the moon. The results of lunar magnetometer data analysis are reviewed, with emphasis on the lunar interior. Magnetic fields have been measured on the lunar surface at the Apollo 12, 14, 15, and 16 landing sites. The remanent field values at these sites are given. Satellite and surface measurements show strong evidence that the lunar crust is magnetized over much of the lunar globe. The origin of the lunar remanent field is not yet satisfactorily understood; several source models are presented. Simultaneous data from the Apollo 12 lunar surface magnetometer and the Explorer 35 Ames magnetometer are used to construct a wholemoon hysteresis curve, from which the global lunar permeability is determined. Total iron abundance is calculated for two assumed compositional models of the lunar interior. Other lunar models with a small iron core and with a shallow iron-rich layer are also discussed in light of the measured global permeability.

  19. Sedimentary geomorphology of the Mars Pathfinder Landing Site

    Science.gov (United States)

    Rice, James W., Jr.; Parker, Timothy Jay

    1997-01-01

    The first landing on Mars in over 20 years will take place July 4, 1997, near te mouth of the Ares Vallis outflow channel located in southeastern Chryse Planitia. Mars Pathfinder, unlike Viking 1, is expected to land on a surface that has a distinct and unambiguous fluvial signature.

  20. Designing small universal k-mer hitting sets for improved analysis of high-throughput sequencing.

    Directory of Open Access Journals (Sweden)

    Yaron Orenstein

    2017-10-01

    Full Text Available With the rapidly increasing volume of deep sequencing data, more efficient algorithms and data structures are needed. Minimizers are a central recent paradigm that has improved various sequence analysis tasks, including hashing for faster read overlap detection, sparse suffix arrays for creating smaller indexes, and Bloom filters for speeding up sequence search. Here, we propose an alternative paradigm that can lead to substantial further improvement in these and other tasks. For integers k and L > k, we say that a set of k-mers is a universal hitting set (UHS if every possible L-long sequence must contain a k-mer from the set. We develop a heuristic called DOCKS to find a compact UHS, which works in two phases: The first phase is solved optimally, and for the second we propose several efficient heuristics, trading set size for speed and memory. The use of heuristics is motivated by showing the NP-hardness of a closely related problem. We show that DOCKS works well in practice and produces UHSs that are very close to a theoretical lower bound. We present results for various values of k and L and by applying them to real genomes show that UHSs indeed improve over minimizers. In particular, DOCKS uses less than 30% of the 10-mers needed to span the human genome compared to minimizers. The software and computed UHSs are freely available at github.com/Shamir-Lab/DOCKS/ and acgt.cs.tau.ac.il/docks/, respectively.

  1. The Nature, Origin, and Importance of Carbonate-Bearing Samples at the Final Three Candidate Mars 2020 Landing Sites

    Science.gov (United States)

    Horgan, B.; Anderson, R. B.; Ruff, S. W.

    2018-04-01

    All three candidate Mars 2020 landing sites contain similar regional olivine/carbonate units, and a carbonate unit of possible lacustrine origin is also present at Jezero. Carbonates are critical for Mars Sample Return as records of climate and biosignatures.

  2. Recreational use in dispersed public lands measured using social media data and on-site counts.

    Science.gov (United States)

    Fisher, David M; Wood, Spencer A; White, Eric M; Blahna, Dale J; Lange, Sarah; Weinberg, Alex; Tomco, Michael; Lia, Emilia

    2018-09-15

    Outdoor recreation is one of many important benefits provided by public lands. Data on recreational use are critical for informing management of recreation resources, however, managers often lack actionable information on visitor use for large protected areas that lack controlled access points. The purpose of this study is to explore the potential for social media data (e.g., geotagged images shared on Flickr and trip reports shared on a hiking forum) to provide land managers with useful measures of recreational use to dispersed areas, and to provide lessons learned from comparing several more traditional counting methods. First, we measure daily and monthly visitation rates to individual trails within the Mount Baker-Snoqualmie National Forest (MBSNF) in western Washington. At 15 trailheads, we compare counts of hikers from infrared sensors, timelapse cameras, and manual on-site counts, to counts based on the number of shared geotagged images and trip reports from those locations. Second, we measure visitation rates to each National Forest System (NFS) unit across the US and compare annual measurements derived from the number of geotagged images to estimates from the US Forest Service National Visitor Use Monitoring Program. At both the NFS unit and the individual-trail scales, we found strong correlations between traditional measures of recreational use and measures based on user-generated content shared on the internet. For national forests in every region of the country, correlations between official Forest Service statistics and geotagged images ranged between 55% and 95%. For individual trails within the MBSNF, monthly visitor counts from on-site measurements were strongly correlated with counts from geotagged images (79%) and trip reports (91%). The convenient, cost-efficient and timely nature of collecting and analyzing user-generated data could allow land managers to monitor use over different seasons of the year and at sites and scales never previously

  3. Searching for animal models and potential target species for emerging pathogens: Experience gained from Middle East respiratory syndrome (MERS coronavirus

    Directory of Open Access Journals (Sweden)

    Júlia Vergara-Alert

    2017-06-01

    Full Text Available Emerging and re-emerging pathogens represent a substantial threat to public health, as demonstrated with numerous outbreaks over the past years, including the 2013–2016 outbreak of Ebola virus in western Africa. Coronaviruses are also a threat for humans, as evidenced in 2002/2003 with infection by the severe acute respiratory syndrome coronavirus (SARS-CoV, which caused more than 8000 human infections with 10% fatality rate in 37 countries. Ten years later, a novel human coronavirus (Middle East respiratory syndrome coronavirus, MERS-CoV, associated with severe pneumonia, arose in the Kingdom of Saudi Arabia. Until December 2016, MERS has accounted for more than 1800 cases and 35% fatality rate. Finding an animal model of disease is key to develop vaccines or antivirals against such emerging pathogens and to understand its pathogenesis. Knowledge of the potential role of domestic livestock and other animal species in the transmission of pathogens is of importance to understand the epidemiology of the disease. Little is known about MERS-CoV animal host range. In this paper, experimental data on potential hosts for MERS-CoV is reviewed. Advantages and limitations of different animal models are evaluated in relation to viral pathogenesis and transmission studies. Finally, the relevance of potential new target species is discussed.

  4. Application of State Analysis and Goal-based Operations to a MER Mission Scenario

    Science.gov (United States)

    Morris, John Richard; Ingham, Michel D.; Mishkin, Andrew H.; Rasmussen, Robert D.; Starbird, Thomas W.

    2006-01-01

    State Analysis is a model-based systems engineering methodology employing a rigorous discovery process which articulates operations concepts and operability needs as an integrated part of system design. The process produces requirements on system and software design in the form of explicit models which describe the system behavior in terms of state variables and the relationships among them. By applying State Analysis to an actual MER flight mission scenario, this study addresses the specific real world challenges of complex space operations and explores technologies that can be brought to bear on future missions. The paper first describes the tools currently used on a daily basis for MER operations planning and provides an in-depth description of the planning process, in the context of a Martian day's worth of rover engineering activities, resource modeling, flight rules, science observations, and more. It then describes how State Analysis allows for the specification of a corresponding goal-based sequence that accomplishes the same objectives, with several important additional benefits.

  5. Development of technology for the design of shallow land burial facilities at arid sites

    International Nuclear Information System (INIS)

    Nyhan, J.W.; Abeele, W.V.; Drennon, B.J.; Herrera, W.J.; Lopez, E.A.; Langhorst, G.J.; Stallings, E.A.; Walker, R.D.; Martinez, J.L.

    1985-01-01

    The Los Alamos field research program involving technology development for arid shallow land burial (SLB) sites is described. Field data are presented for an integrated field experiment, which was designed to test individual SLB component experiments related to erosion control, biobarriers, and subsurface capillary and migration barriers. Field tests of biointrusion barriers at waste disposal sites and in experimental plots are reported. The results of a joint DOE/NRC experiment to evaluate leaching and transport of sorbing (Cs, Sr, Li) and nonsorbing (I, Br) solutes in sandy silt backfill are presented for steady-state and unsteady-state flow conditions. A capillary barrier experiment performed in a large caisson (3-m diameter, 6.1 m deep) is described and a year's worth of field data is presented

  6. Middle East respiratory syndrome coronavirus (MERS Cov outbreak so far exempted Sub Saharan Africa; is it good news or call for action?

    Directory of Open Access Journals (Sweden)

    Ballah Akawu Denue

    2015-01-01

    Full Text Available The reported cases of MERS Cov in Arabian Peninsula and sporadic cases elsewhere except in sub Saharan Africa at present is disquieting considering its initial clinical feature that mimic flu like symptoms caused by other viruses. However MERS Cov is associated with organ dysfunction and high mortality. Although the mode of transmission is still unclear, it is postulated that it spreads through close contact, possibly via respiratory route. High similarities of MERS CoV carried by humans and camels may suggest that the diseases are zoonotic. Furthermore, airborne nosocomial transmission can occur in the room shared by the patients in the hospitals. There is still the confusion of transmission through body fluids or clinical samples, including stools and a cross transmission with medical devices or hands. Currently, all known cases can be directly or indirectly linked to Middle East from where it derives its name. Cases reported outside the Middle East first developed infection in the Middle East and then were exported outside the region. Several hospital-acquired outbreaks that resulted in upsurge of MERS Cov cases in Jeddah revealed lack of systematic implementation of infection prevention and control measures to effectively control emerging infectious diseases. The causative agent is detected and identified using Enzyme Linked Immuunosorbent Assay (ELISA and real-time polymerase chain reaction (RT-PCR that is expensive and not readily available in hospitals located in resource poor settings such as sub Saharan Africa. Although, so far no case of MERS Cov has been reported from sub Saharan Africa, the devastating consequences of MERS epidemic will be more catastrophic if it emerges in developing nations especially in sub Saharan Africa where there are no up to date facilities for investigations and management of such cases. Against this backdrop, we review this hazardous and incurable disease believing that it would create the necessary

  7. Corrective measures technology for shallow land burial at arid sites: field studies of biointrusion barriers and erosion control

    International Nuclear Information System (INIS)

    Nyhan, J.W.; Hakonson, T.E.; Lopez, E.A.

    1986-03-01

    The field research program involving corrective measures technologies for arid shallow land burial (SLB) sites is described. Results of field testing of a biointrusion barrier installed at a close-out waste disposal site (Area B) at Los Alamos are presented. Soil erosion and infiltration of water into a simulated trench cap with various surface treatments were measured, and the interaction between erosion control and subsurface water dynamics is discussed relative to waste management

  8. Treatment outcomes for patients with Middle Eastern Respiratory Syndrome Coronavirus (MERS CoV) infection at a coronavirus referral center in the Kingdom of Saudi Arabia.

    Science.gov (United States)

    Al Ghamdi, Mohammed; Alghamdi, Khalid M; Ghandoora, Yasmeen; Alzahrani, Ameera; Salah, Fatmah; Alsulami, Abdulmoatani; Bawayan, Mayada F; Vaidya, Dhananjay; Perl, Trish M; Sood, Geeta

    2016-04-21

    Middle Eastern Respiratory Syndrome coronavirus (MERS-CoV) is a poorly understood disease with no known treatments. We describe the clinical features and treatment outcomes of patients with laboratory confirmed MERS-CoV at a regional referral center in the Kingdom of Saudi Arabia. In 2014, a retrospective chart review was performed on patients with a laboratory confirmed diagnosis of MERS-CoV to determine clinical and treatment characteristics associated with death. Confounding was evaluated and a multivariate logistic regression was performed to assess the independent effect of treatments administered. Fifty-one patients had an overall mortality of 37 %. Most patients were male (78 %) with a mean age of 54 years. Almost a quarter of the patients were healthcare workers (23.5 %) and 41 % had a known exposure to another person with MERS-CoV. Survival was associated with male gender, working as a healthcare worker, history of hypertension, vomiting on admission, elevated respiratory rate, abnormal lung exam, elevated alanine transaminase (ALT), clearance of MERS-CoV on repeat PCR polymerase chain reaction (PCR) testing, and mycophenolate mofetil treatment. Survival was reduced in the presence of coronary artery disease, hypotension, hypoxemia, CXR (chest X-ray) abnormalities, leukocytosis, creatinine >1 · 5 mg/dL, thrombocytopenia, anemia, and renal failure. In a multivariate analysis of treatments administered, severity of illness was the greatest predictor of reduced survival. Care for patients with MERS-CoV remains a challenge. In this retrospective cohort, interferon beta and mycophenolate mofetil treatment were predictors of increased survival in the univariate analysis. Severity of illness was the greatest predictor of reduced survival in the multivariate analysis. Larger randomized trials are needed to better evaluate the efficacy of these treatment regimens for MERS-CoV.

  9. New reclamation standards for oil and gas well sites and pipelines in the agricultural land reserve

    International Nuclear Information System (INIS)

    Jones, P.

    1995-01-01

    Reclamation standards are a necessity because of increasing density of oil and gas developments, and the number of wells which may be abandoned over the next few years. All petroleum industry users of land are subject to the Agricultural Land Commission Act and require the approval of the Commission. The new General Order 293/95 was discussed, the purpose of which is to streamline existing regulations and to clarify reclamation standards. The new standards are similar to requirements currently in place in northwestern Alberta because landforms, soils, and land there are similar to those that exist in the Peace River region of B.C. Adopting similar requirements also has the added benefit of providing consistency for the industry between adjacent jurisdictions. In essence, the official view is that petroleum developments are temporary activities as long as the land is restored to its original or better condition, and the disruption to farm operations is minimal. Major provisions of General Order 293/95 were reviewed. It was noted that site contamination and the disposal of wastes were not addressed in the General Order. The reason for this is that these matters fall under the jurisdiction of other government agencies. 7 refs

  10. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Tronox Facility in Savannah, Georgia. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Kiatreungwattana, K.; Geiger, J.; Healey, V.; Mosey, G.

    2013-03-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Tronox Facility site in Savannah, Georgia, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  11. Identifying opportune landing sites in degraded visual environments with terrain and cultural databases

    Science.gov (United States)

    Moody, Marc; Fisher, Robert; Little, J. Kristin

    2014-06-01

    Boeing has developed a degraded visual environment navigational aid that is flying on the Boeing AH-6 light attack helicopter. The navigational aid is a two dimensional software digital map underlay generated by the Boeing™ Geospatial Embedded Mapping Software (GEMS) and fully integrated with the operational flight program. The page format on the aircraft's multi function displays (MFD) is termed the Approach page. The existing work utilizes Digital Terrain Elevation Data (DTED) and OpenGL ES 2.0 graphics capabilities to compute the pertinent graphics underlay entirely on the graphics processor unit (GPU) within the AH-6 mission computer. The next release will incorporate cultural databases containing Digital Vertical Obstructions (DVO) to warn the crew of towers, buildings, and power lines when choosing an opportune landing site. Future IRAD will include Light Detection and Ranging (LIDAR) point cloud generating sensors to provide 2D and 3D synthetic vision on the final approach to the landing zone. Collision detection with respect to terrain, cultural, and point cloud datasets may be used to further augment the crew warning system. The techniques for creating the digital map underlay leverage the GPU almost entirely, making this solution viable on most embedded mission computing systems with an OpenGL ES 2.0 capable GPU. This paper focuses on the AH-6 crew interface process for determining a landing zone and flying the aircraft to it.

  12. Assessment of volatile organic emissions from a petroleum refinery land treatment site

    International Nuclear Information System (INIS)

    Wetherold, R.G.; Eklund, B.M.; Blaney, B.J.; Throneloe, S.A.

    1990-01-01

    This paper reports on a field assessment performed to measure the emissions of volatile organics from a petroleum refinery land treatment site. As part of this study, the emissions of total volatile organics from surface-applied and subsurface-injected oily sludge were measured over a 5-week period. The effect of soil tilling on the emissions also was monitored. Volatile organics emission rates were measured using the emission isolation flex chamber method. Soil samples were collected during the test periods to determine soil properties, oil levels and microbe count. Soil surface and ambient temperatures, both inside and outside the flux chambers, were measured throughout the test periods

  13. A comparison of alternative 60-mer probe designs in an in-situ synthesized oligonucleotide microarray

    Directory of Open Access Journals (Sweden)

    Fairbanks Benjamin D

    2006-04-01

    Full Text Available Abstract Background DNA microarrays have proven powerful for functional genomics studies. Several technologies exist for the generation of whole-genome arrays. It is well documented that 25mer probes directed against different regions of the same gene produce variable signal intensity values. However, the extent to which this is true for probes of greater length (60mers is not well characterized. Moreover, this information has not previously been reported for whole-genome arrays designed against bacteria, whose genomes may differ substantially in characteristics directly affecting microarray performance. Results We report here an analysis of alternative 60mer probe designs for an in-situ synthesized oligonucleotide array for the GC rich, β-proteobacterium Burkholderia cenocepacia. Probes were designed using the ArrayOligoSel3.5 software package and whole-genome microarrays synthesized by Agilent, Inc. using their in-situ, ink-jet technology platform. We first validated the quality of the microarrays as demonstrated by an average signal to noise ratio of >1000. Next, we determined that the variance of replicate probes (1178 total probes examined of identical sequence was 3.8% whereas the variance of alternative probes (558 total alternative probes examined designs was 9.5%. We determined that depending upon the definition, about 2.4% of replicate and 7.8% of alternative probes produced outlier conclusions. Finally, we determined none of the probe design subscores (GC content, internal repeat, binding energy and self annealment produced by ArrayOligoSel3.5 were predictive or probes that produced outlier signals. Conclusion Our analysis demonstrated that the use of multiple probes per target sequence is not essential for in-situ synthesized 60mer oligonucleotide arrays designed against bacteria. Although probes producing outlier signals were identified, the use of ratios results in less than 10% of such outlier conclusions. We also determined that

  14. General document environmental impact report (m.e.r.) oil and gas exploitation industry. Update and supplement of the general document; Generiek document m.e.r. offshore olie- en gaswinningsindustrie. Update en aanvulling van het generiek document environmental impact report (m.e.r.) offshore, 1999

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2008-04-15

    The generic environmental impact assessment (EIA or MER in Dutch) in 1999 is intended to serve as a template for specific environmental impact assessments for oil and gas exploitation projects at sea. Since 1999, a number of innovations and changes were implemented. Particularly in offshore technologies and regulations new insights and ideas came up in recent years. Therefore the existing generic document has to be updated with new information, relevant in the preparation of specific environmental impact assessments in the offshore oil and gas exploitation industry in the Dutch part of the Continental Shelf [Dutch] De generieke milieu effect rapportage (MER) uit 1999 is bedoeld om te dienen als een sjabloon voor specifieke Milieueffectrapportages bij olie- en gaswinningprojecten op zee. Sinds 1999 is een aantal vernieuwingen en veranderingen doorgevoerd. Met name in offshore technologieen en wet- en regelgeving zijn de afgelopen jaren nieuwe inzichten en ideeen ontstaan. Hierdoor is de wens ontstaan om het bestaande generieke document aan te vullen met nieuwe informatie die relevant is voor het opstellen van specifieke Milieueffectrapportages in de offshore olie- en gaswinningsindustrie op het Nederlands deel van het Continentaal Plat.

  15. The Middle East respiratory syndrome coronavirus (MERS-CoV does not replicate in Syrian hamsters.

    Directory of Open Access Journals (Sweden)

    Emmie de Wit

    Full Text Available In 2012 a novel coronavirus, MERS-CoV, associated with severe respiratory disease emerged in the Arabian Peninsula. To date, 55 human cases have been reported, including 31 fatal cases. Several of the cases were likely a result of human-to-human transmission. The emergence of this novel coronavirus prompts the need for a small animal model to study the pathogenesis of this virus and to test the efficacy of potential intervention strategies. In this study we explored the use of Syrian hamsters as a small animal disease model, using intratracheal inoculation and inoculation via aerosol. Clinical signs of disease, virus replication, histological lesions, cytokine upregulation nor seroconversion were observed in any of the inoculated animals, indicating that MERS-CoV does not replicate in Syrian hamsters.

  16. Characterizing of a Mid-Latitude Ice-Rich Landing Site on Mars to Enable in Situ Habitability Studies

    Science.gov (United States)

    Heldmann, J.; Schurmeier, L. R.; Wilhelm, M.; Stoker, C.; McKay, C.; Davila, A.; Marinova, M.; Karcz, J.; Smith, H.

    2012-01-01

    We suggest an ice-rich landing site at 188.5E 46.16N within Amazonis Planitia as a candidate location to support a Mars lander mission equipped to study past habitability and regions capable of preserving the physical and chemical signs of life and organic matter. Studies of the ice-rich subsurface on Mars are critical for several reasons. The subsurface environment provides protection from radiation to shield organic and biologic compounds from destruction. The ice-rich substrate is also ideal for preserving organic and biologic molecules and provides a source of H2O for biologic activity. Examination of martian ground ice can test several hypotheses such as: 1) whether ground ice supports habitable conditions, 2) that ground ice can preserve and accumulate organic compounds, and 3) that ice contains biomolecules evident of past or present biological activity on Mars. This Amazonis site, located near the successful Viking Lander 2, shows indirect evidence of subsurface ice (ubiquitous defined polygonal ground, gamma ray spectrometer hydrogen signature, and numerical modeling of ice stability) and direct evidence of exposed subsurface ice. This site also provides surface conditions favorable to a safe landing including no boulders, low rock density, minimal rough topography, and few craters.

  17. The Mawrth Vallis region of Mars: A potential landing site for the Mars Science Laboratory (MSL) mission.

    Science.gov (United States)

    Michalski, Joseph R; Jean-PierreBibring; Poulet, François; Loizeau, Damien; Mangold, Nicolas; Dobrea, Eldar Noe; Bishop, Janice L; Wray, James J; McKeown, Nancy K; Parente, Mario; Hauber, Ernst; Altieri, Francesca; Carrozzo, F Giacomo; Niles, Paul B

    2010-09-01

    The primary objective of NASA's Mars Science Laboratory (MSL) mission, which will launch in 2011, is to characterize the habitability of a site on Mars through detailed analyses of the composition and geological context of surface materials. Within the framework of established mission goals, we have evaluated the value of a possible landing site in the Mawrth Vallis region of Mars that is targeted directly on some of the most geologically and astrobiologically enticing materials in the Solar System. The area around Mawrth Vallis contains a vast (>1 × 10⁶ km²) deposit of phyllosilicate-rich, ancient, layered rocks. A thick (>150 m) stratigraphic section that exhibits spectral evidence for nontronite, montmorillonite, amorphous silica, kaolinite, saponite, other smectite clay minerals, ferrous mica, and sulfate minerals indicates a rich geological history that may have included multiple aqueous environments. Because phyllosilicates are strong indicators of ancient aqueous activity, and the preservation potential of biosignatures within sedimentary clay deposits is high, martian phyllosilicate deposits are desirable astrobiological targets. The proposed MSL landing site at Mawrth Vallis is located directly on the largest and most phyllosilicate-rich deposit on Mars and is therefore an excellent place to explore for evidence of life or habitability.

  18. Weibull Wind-Speed Distribution Parameters Derived from a Combination of Wind-Lidar and Tall-Mast Measurements Over Land, Coastal and Marine Sites

    DEFF Research Database (Denmark)

    Gryning, Sven-Erik; Floors, Rogier Ralph; Peña, Alfredo

    2016-01-01

    Wind-speed observations from tall towers are used in combination with observations up to 600 m in altitude from a Doppler wind lidar to study the long-term conditions over suburban (Hamburg), rural coastal (Høvsøre) and marine (FINO3) sites. The variability in the wind field among the sites is ex...... of the vertical profile of the shape parameter fits well with observations over land, coastal regions and over the sea. An applied model for the dependence of the reversal height on the surface roughness is in good agreement with the observations over land....

  19. THE DEVELOPMENT OF SYNTHETIC SOIL MATERIALS FOR THE SUCCESSFUL RECLAMATION OF ABANDONED MINED LAND SITES

    Energy Technology Data Exchange (ETDEWEB)

    Song Jin

    2006-03-01

    Abandoned mine sites associated with coal and metal mining across the western United States have been left as unproductive wastelands. The availability of soil materials or other materials to support the restoration of the vegetative cover and enhance the recovery of such areas is limited. The restoration of these areas often requires the use of available amendments such as organic waste products or to help stabilize the soil. Many of the organic waste products, including sewage sludge, clarifier sludge, fly ash sludge, and other by-products from the agricultural industries such as compost can be employed for beneficial uses. This study looked at the feasibility of applying organic waste products to a mine soil in Montana to increase soil fertility and enhance plant productivity. Waste rock samples were tested for acid forming potential via acid base accounting. Samples cores were constructed and leached with simulated rainwater to determine amendment affect on metal leaching. A greenhouse study was completed to determine the most suitable amendment(s) for the field mine land site. Results from the acid base accounting indicate that acid formed from the waste rock would be neutralized with the alkalinity in the system. Results also show that metals in solution are easily held by organics from the amendments and not allowed to leach in to the surrounding water system. Data from the greenhouse study indicated that the amendment of sewage sludge was most promising. Application of 2% sewage sludge along with 1% sewage sludge plus 1% clarifier sludge, 2% compost, and no treatment were used for mine land application. Initial results were encouraging and it appears that sewage sludge may be a good reclamation option for mine lands.

  20. Naval Station Newport Wind Resource Assessment. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites, and The Naval Facilities Engineering Service Center

    Energy Technology Data Exchange (ETDEWEB)

    Robichaud, R.; Fields, J.; Roberts, J. O.

    2012-02-01

    The U.S. Environmental Protection Agency (EPA) launched the RE-Powering America's Land initiative to encourage development of renewable energy (RE) on potentially contaminated land and mine sites. EPA is collaborating with the U.S. Department of Energy's (DOE's) National Renewable Energy Laboratory (NREL) to evaluate RE options at Naval Station (NAVSTA) Newport in Newport, Rhode Island where multiple contaminated areas pose a threat to human health and the environment. Designated a superfund site on the National Priorities List in 1989, the base is committed to working toward reducing the its dependency on fossil fuels, decreasing its carbon footprint, and implementing RE projects where feasible. The Naval Facilities Engineering Service Center (NFESC) partnered with NREL in February 2009 to investigate the potential for wind energy generation at a number of Naval and Marine bases on the East Coast. NAVSTA Newport was one of several bases chosen for a detailed, site-specific wind resource investigation. NAVSTA Newport, in conjunction with NREL and NFESC, has been actively engaged in assessing the wind resource through several ongoing efforts. This report focuses on the wind resource assessment, the estimated energy production of wind turbines, and a survey of potential wind turbine options based upon the site-specific wind resource.

  1. Land Surface Reflectance Retrieval from Hyperspectral Data Collected by an Unmanned Aerial Vehicle over the Baotou Test Site

    Science.gov (United States)

    Duan, Si-Bo; Li, Zhao-Liang; Tang, Bo-Hui; Wu, Hua; Ma, Lingling; Zhao, Enyu; Li, Chuanrong

    2013-01-01

    To evaluate the in-flight performance of a new hyperspectral sensor onboard an unmanned aerial vehicle (UAV-HYPER), a comprehensive field campaign was conducted over the Baotou test site in China on 3 September 2011. Several portable reference reflectance targets were deployed across the test site. The radiometric performance of the UAV-HYPER sensor was assessed in terms of signal-to-noise ratio (SNR) and the calibration accuracy. The SNR of the different bands of the UAV-HYPER sensor was estimated to be between approximately 5 and 120 over the homogeneous targets, and the linear response of the apparent reflectance ranged from approximately 0.05 to 0.45. The uniform and non-uniform Lambertian land surface reflectance was retrieved and validated using in situ measurements, with root mean square error (RMSE) of approximately 0.01–0.07 and relative RMSE of approximately 5%–12%. There were small discrepancies between the retrieved uniform and non-uniform Lambertian land surface reflectance over the homogeneous targets and under low aerosol optical depth (AOD) conditions (AOD = 0.18). However, these discrepancies must be taken into account when adjacent pixels had large land surface reflectance contrast and under high AOD conditions (e.g. AOD = 1.0). PMID:23785513

  2. Feasibility Study of Economics and Performance of Solar Photovoltaics at the TechCity East Campus Resource Conservation and Recovery Act Site in Kingston, New York. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Salasovich, James [National Renewable Energy Lab. (NREL), Golden, CO (United States); Geiger, Jesse W. [National Renewable Energy Lab. (NREL), Golden, CO (United States); Mosey, Gail [National Renewable Energy Lab. (NREL), Golden, CO (United States); Healey, Victoria [National Renewable Energy Lab. (NREL), Golden, CO (United States)

    2014-01-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the TechCity East Campus site in Kingston, New York, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this study is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  3. MicroRNA categorization using sequence motifs and k-mers.

    Science.gov (United States)

    Yousef, Malik; Khalifa, Waleed; Acar, İlhan Erkin; Allmer, Jens

    2017-03-14

    Post-transcriptional gene dysregulation can be a hallmark of diseases like cancer and microRNAs (miRNAs) play a key role in the modulation of translation efficiency. Known pre-miRNAs are listed in miRBase, and they have been discovered in a variety of organisms ranging from viruses and microbes to eukaryotic organisms. The computational detection of pre-miRNAs is of great interest, and such approaches usually employ machine learning to discriminate between miRNAs and other sequences. Many features have been proposed describing pre-miRNAs, and we have previously introduced the use of sequence motifs and k-mers as useful ones. There have been reports of xeno-miRNAs detected via next generation sequencing. However, they may be contaminations and to aid that important decision-making process, we aimed to establish a means to differentiate pre-miRNAs from different species. To achieve distinction into species, we used one species' pre-miRNAs as the positive and another species' pre-miRNAs as the negative training and test data for the establishment of machine learned models based on sequence motifs and k-mers as features. This approach resulted in higher accuracy values between distantly related species while species with closer relation produced lower accuracy values. We were able to differentiate among species with increasing success when the evolutionary distance increases. This conclusion is supported by previous reports of fast evolutionary changes in miRNAs since even in relatively closely related species a fairly good discrimination was possible.

  4. Solar Development on Contaminated and Disturbed Lands

    Energy Technology Data Exchange (ETDEWEB)

    Macknick, Jordan [National Renewable Energy Lab. (NREL), Golden, CO (United States); Lee, Courtney [National Renewable Energy Lab. (NREL), Golden, CO (United States); Mosey, Gail [National Renewable Energy Lab. (NREL), Golden, CO (United States); Melius, Jenny [National Renewable Energy Lab. (NREL), Golden, CO (United States)

    2013-12-01

    Land classified as contaminated and disturbed across the United States has the potential to host developments of utility-scale solar power. This report examines the prospect of developing utility- and commercial-scale concentrated solar power (CSP) and solar photovoltaics (PV) technologies on degraded and environmentally contaminated lands. The potential for solar development on contaminated anddisturbed lands was assessed, and for the largest and highest solar resource sites, the economic impacts and feasibility were evaluated. Developing solar power on contaminated and disturbed lands can help create jobs and revitalize local and state economies, and selecting these sites over greenfield sites can potentially have permitting and environmental mitigation advantages. The U.S.Department of Energy (DOE) SunShot goals call for 632 GW of PV and 83 GW of CSP to be deployed by 2050. Conservative land-use estimates of this study (10 acres per megawatt) show that there are disturbed and environmentally contaminated lands throughout the country that could be suitable for utility-scale solar power, and, that there is sufficient land area to meet SunShot solar deployment goals. The purpose of this assessment is to improve the understanding of these sites and facilitate solar developers' selection of contaminated and disturbed sites for development.

  5. Tuning in and catching on? Examining the relationship between pandemic communication and awareness and knowledge of MERS in the USA.

    Science.gov (United States)

    Lin, Leesa; McCloud, Rachel F; Bigman, Cabral A; Viswanath, Kasisomayajula

    2017-06-01

    Large-scale influenza outbreaks over the last decade, such as SARS and H1N1, have brought to global attention the importance of emergency risk communication and prompted the international community to develop communication responses. Since pandemic outbreaks are relatively infrequent, there is a dearth of evidence addressing the following questions: (i) Have the resources invested in strategic and routine communication for past pandemic outbreaks yielded public health preparedness benefits? (ii) Have past efforts sensitized people to pay attention to new pandemic threats? The Middle East Respiratory Syndrome (MERS) that was followed closely by major media outlets in the USA provides an opportunity to examine the relationship between exposure to public communication about epidemics and public awareness and knowledge about new risks. In December, 2013, we surveyed a nationally representative sample of 627 American adults and examined the associations between people's awareness to prior pandemics and their awareness of and knowledge about MERS. Awareness of prior pandemics was significantly associated with awareness and knowledge of MERS. The most common sources from which people first heard about MERS were also identified. Communication inequalities were observed between racial/ethnic and socioeconomic positions, suggesting a need for more effective pandemic communication. © The Author 2016. Published by Oxford University Press on behalf of Faculty of Public Health. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  6. Land suitability maps for waste disposal siting

    International Nuclear Information System (INIS)

    Hrasna, M.

    1996-01-01

    The suitability of geoenvironment for waste disposal depends mainly on its stability and on the danger of groundwater pollution. Besides them, on the land suitability maps for the given purpose also those factors of the factors of the geoenvironment and the landscape should be taken into account, which enable another way of the land use, such as mineral resources, water resources, fertile soils, nature reserves, etc. On the base of the relevant factors influence evaluation - suitable, moderately suitable and unsuitable territorial units are delimited on the maps. The different way of various scale maps compilation is applied, taken into account their different representing feasibilities. (authors)

  7. Analyses of Rock Size-Frequency Distributions and Morphometry of Modified Hawaiian Lava Flows: Implications for Future Martian Landing Sites

    Science.gov (United States)

    Craddock, Robert A.; Golombek, Matthew; Howard, Alan D.

    2000-01-01

    Both the size-frequency distribution and morphometry of rock populations emplaced by a variety of geologic processes in Hawaii indicate that such information may be useful in planning future landing sites on Mars and interpreting the surface geology.

  8. Correlated compositional and mineralogical investigations at the Chang′e-3 landing site

    Science.gov (United States)

    Ling, Zongcheng; Jolliff, Bradley L.; Wang, Alian; Li, Chunlai; Liu, Jianzhong; Zhang, Jiang; Li, Bo; Sun, Lingzhi; Chen, Jian; Xiao, Long; Liu, Jianjun; Ren, Xin; Peng, Wenxi; Wang, Huanyu; Cui, Xingzhu; He, Zhiping; Wang, Jianyu

    2015-01-01

    The chemical compositions of relatively young mare lava flows have implications for the late volcanism on the Moon. Here we report the composition of soil along the rim of a 450-m diameter fresh crater at the Chang′e-3 (CE-3) landing site, investigated by the Yutu rover with in situ APXS (Active Particle-induced X-ray Spectrometer) and VNIS (Visible and Near-infrared Imaging Spectrometer) measurements. Results indicate that this region's composition differs from other mare sample-return sites and is a new type of mare basalt not previously sampled, but consistent with remote sensing. The CE-3 regolith derived from olivine-normative basaltic rocks with high FeO/(FeO+MgO). Deconvolution of the VNIS data indicates abundant high-Ca ferropyroxene (augite and pigeonite) plus Fe-rich olivine. We infer from the regolith composition that the basaltic source rocks formed during late-stage magma-ocean differentiation when dense ferropyroxene-ilmenite cumulates sank and mixed with deeper, relatively ferroan olivine and orthopyroxene in a hybridized mantle source. PMID:26694712

  9. Correlated compositional and mineralogical investigations at the Chang'e-3 landing site.

    Science.gov (United States)

    Ling, Zongcheng; Jolliff, Bradley L; Wang, Alian; Li, Chunlai; Liu, Jianzhong; Zhang, Jiang; Li, Bo; Sun, Lingzhi; Chen, Jian; Xiao, Long; Liu, Jianjun; Ren, Xin; Peng, Wenxi; Wang, Huanyu; Cui, Xingzhu; He, Zhiping; Wang, Jianyu

    2015-12-22

    The chemical compositions of relatively young mare lava flows have implications for the late volcanism on the Moon. Here we report the composition of soil along the rim of a 450-m diameter fresh crater at the Chang'e-3 (CE-3) landing site, investigated by the Yutu rover with in situ APXS (Active Particle-induced X-ray Spectrometer) and VNIS (Visible and Near-infrared Imaging Spectrometer) measurements. Results indicate that this region's composition differs from other mare sample-return sites and is a new type of mare basalt not previously sampled, but consistent with remote sensing. The CE-3 regolith derived from olivine-normative basaltic rocks with high FeO/(FeO+MgO). Deconvolution of the VNIS data indicates abundant high-Ca ferropyroxene (augite and pigeonite) plus Fe-rich olivine. We infer from the regolith composition that the basaltic source rocks formed during late-stage magma-ocean differentiation when dense ferropyroxene-ilmenite cumulates sank and mixed with deeper, relatively ferroan olivine and orthopyroxene in a hybridized mantle source.

  10. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Kolthoff Landfill in Cleveland, Ohio. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Salasovich, J.; Geiger, J.; Mosey, G.; Healey, V.

    2013-06-01

    The U.S. Environmental Protection Agency (EPA), Region 5, in accordance with the RE-Powering America's Land initiative, selected the Kolthoff Landfill site in Cleveland, Ohio, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  11. Mosaic of Apollo 16 Descartes landing site taken from TV transmission

    Science.gov (United States)

    1972-01-01

    A 360 degree field of view of the Apollo 16 Descartes landing site area composed of individual scenes taken from a color transmission made by the color RCA TV camera mounted on the Lunar Roving Vehicle. This panorama was made while the LRV was parked at the rim of North Ray crater (Stations 11 and 12) during the third Apollo 16 lunar surface extravehicular activity (EVA-3) by Astronauts John W. Young and Charles M. Duke Jr. The overlay identifies the directions and the key lunar terrain features. The camera panned across the rear portion of the LRV in its 360 degree sweep. Note Young and Duke walking along the edge of the crater in one of the scenes. The TV camera was remotely controlled from a console in the Mission Control Center.

  12. Feasibility Study of Anaerobic Digestion of Food Waste in St. Bernard, Louisiana. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Moriarty, K.

    2013-01-01

    The U.S. Environmental Protection Agency (EPA) developed the RE-Powering America's Land initiative to re-use contaminated sites for renewable energy generation when aligned with the community's vision for the site. The former Kaiser Aluminum Landfill in St. Bernard Parish, Louisiana, was selected for a feasibility study under the program. Preliminary work focused on selecting a biomass feedstock. Discussions with area experts, universities, and the project team identified food wastes as the feedstock and anaerobic digestion (AD) as the technology.

  13. Composite Risers for Deepwater Applications Risers composites pour applications en mer profonde

    Directory of Open Access Journals (Sweden)

    Metivaud G.

    2006-11-01

    Full Text Available This paper is devoted to the high performance composite tubes developed by the Institut Français du Pétrole (IFP and Aerospatiale for deepwater risers applications. The design principles of the tubes are first presented, along with results of preliminary work carried out as part of the initial feasibility study. Applications of composite tubes to drilling riser Kill and Choke lines and to TLP production risers, both of which have been studied in detail, are then described. Technical and operational advantages obtained from such applications are discussed. Cet article présente les travaux réalisés par l'Institut Français du Pétrole et l'Aerospatiale dans le domaine des tubes composites haute performance pour les applications aux liaisons fond-surface de forage et de production en mer profonde. Les matériaux composites avancés sont une classe de matériaux très particulière, présentant à la fois des caractéristiques mécaniques élevées et une densité spécifique faible. Ils sont utilisés principalement par les industries de l'aéronautique et de l'espace, mais l'industrie pétrolière en mer profonde est un secteur où ils peuvent trouver dans l'avenir des applications très intéressantes, notamment les tubes de risers. Les tubes de risers pétroliers en mer présentent en effet une gamme de spécifications élevées (diamètres, pression, traction, fatigue dans un environnement sévère et leur poids suspendu peut pénaliser fortement les systèmes de forage ou de production par grande profondeur d'eau. Un premier concept de tube composite haute performance a été développé par IFP et Aerospatiale au début des années 1980 ; sa partie courante, réalisée par enroulement filamentaire de fibres de verre R ou de fibres de carbone, et son système d'embout ont été soumis à une série d'essais mécaniques (pression interne jusqu'à 105 MPa, traction supérieure à 1 000 kN pour un diamètre nominal de 0,1 m, millions de

  14. The Shallow Subsurface Geological Structures at the Chang'E-3 Landing Site Based on Lunar Penetrating Radar Channel-2B Data

    Science.gov (United States)

    Zhao, N.; Zhu, P.; Yuan, Y.; Yang, K.; Xiao, L.; Xiao, Z.

    2014-12-01

    The Lunar Penetrating Radar (LPR) carried by the Yutu rover of the Chinese Chang'E-3 mission has detected the shallow subsurface structures for the landing site at the northern Mare Imbrium. The antenna B of the LPR Channel-2 has collected more than 2000 traces of usable raw data. We performed calibration on the LPR data including amplitude compensation, filtering, and deconvolution. The processed results reveal that the shallow subsurface of the landing site can be divided into three major layers whose thicknesses are ~1, ~3, and 2-7 m, respectively. Variations occur on the thickness of each layer at different locations. Considering the geological background of the landing site, we interpret that the first layer is the regolith layer accumulated over ~80 Ma since the formation of the 450 m diameter Chang'E A crater. This regolith layer was formed on the basis of the ejecta deposits of Chang'E A. The second layer is the remnant continuous ejecta deposits from the Chang'E A crater, which is thicker closer to the crater rim and thinning outwardly. The Chang'E A crater formed on a paleo-regolith layer over the Eratosthenian basalts, which represents the third layer detected by the Channel 2B of the LPR.

  15. Size-Frequency Distributions of Rocks on Mars and Earth Analog Sites: Implications for Future Landed Missions

    Science.gov (United States)

    Golombeck, M.; Rapp, D.

    1996-01-01

    The size-frequency distribution of rocks and the Vicking landing sites and a variety of rocky locations on the Earth that formed from a number of geologic processes all have the general shape of simple exponential curves, which have been combined with remote sensing data and models on rock abundance to predict the frequency of boulders potentially hazardous to future Mars landers and rovers.

  16. Lunar Flight Study Series: Volume 8. Earth-Moon Transit Studies Based on Ephemeris Data and Using Best Available Computer Program. Part 3: Analysis of Some Lunar Landing Site Problems Utilizing Two Fundamental Principles

    Science.gov (United States)

    Tucker, W. B.; Hooper, H. L.

    1963-01-01

    This report presents two fundamental properties of lunar trajectories and makes use of these properties to solve various lunar landing site problems. Not only are various problems treated and solved but the properties and methods are established for use in the solution of other problems. This report presents an analysis of lunar landing site problems utilizing the direct mission mode as well as the orbital mission mode. A particular landing site is then specified and different flight profiles are analyzed for getting an exploration vehicle to that landing site. Rendezvous compatible lunar orbits for various stay-times at the landing site are treated. Launch opportunities are discussed for establishing rendezvous compatible lunar orbits without powered plane changes. Then, the minimum required plane changes for rendezvous in the lunar orbit are discussed for launching from earth on any day. On days that afford rendezvous compatible opportunities, there are no powered plane change requirements in the operations from launch at AMR through the rendezvous in lunar orbit, after the stay at the lunar site.

  17. Environmental Assessment for Leasing Land for the Siting, Construction and Operation of a Commercial AM Radio Antenna at Los Alamos National Laboratory, Los Alamos, NM

    Energy Technology Data Exchange (ETDEWEB)

    N/A

    2000-02-16

    The United States (U.S.) Department of Energy (DOE) proposes to lease approximately 3 acres of land at the Los Alamos National Laboratory (LANL) on the southeast tip of Technical Area (TA) 54 for the siting, construction and operation of an AM radio broadcasting antenna. This Environmental Assessment (EA) has been developed in order to assess the environmental effects of the Proposed Action and No Action alternative. The Proposed Action includes the lease of land for the siting, construction and operation of an AM radio broadcasting antenna in TA-54, just north of Pajarito Road and State Highway 4. The No Action Alternative was also considered. Under the No Action Alternative, DOE would not lease land on LANL property for the siting and operation of an AM radio broadcasting antenna; the DOE would not have a local station for emergency response use; and the land would continue to be covered in native vegetation and serve as a health and safety buffer zone for TA-54 waste management activities. Other potential sites on LANL property were evaluated but dismissed for reasons such as interference with sensitive laboratory experiments. Potential visual, health, and environmental effects are anticipated to be minimal for the Proposed Action. The radio broadcasting antenna would be visible against the skyline from some public areas, but would be consistent with other man-made objects in the vicinity that partially obstruct viewsheds (e.g. meteorological tower, power lines). Therefore, the net result would be a modest change of the existing view. Electromagnetic field (EMF) emissions from the antenna would be orders or magnitude less than permissible limits. The proposed antenna construction would not affect known cultural sites, but is located in close proximity to two archaeological sites. Construction would be monitored to ensure that the associated road and utility corridor would avoid cultural sites.

  18. Strength and Deformability of Light-toned Layered Deposits Observed by MER Opportunity: Eagle to Erebus Craters

    Science.gov (United States)

    Okubo, C. H.; Schultz, R. A.; Nahm, A. L.

    2007-07-01

    The strength and deformability of light-toned layered deposits are estimated based on measurements of porosity from Microscopic Imager data acquired by MER Opportunity during its traverse from Eagle Crater to Erebus Crater.

  19. Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers

    DEFF Research Database (Denmark)

    Lundegaard, Claus; Lund, Ole; Nielsen, Morten

    2008-01-01

    Several accurate prediction systems have been developed for prediction of class I major histocompatibility complex (MHC):peptide binding. Most of these are trained on binding affinity data of primarily 9mer peptides. Here, we show how prediction methods trained on 9mer data can be used for accurate...

  20. Feasibility Study of Economics and Performance of a Hydroelectric Installation at the Jeddo Mine Drainage Tunnel. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Roberts, J. O.; Mosey, G.

    2013-02-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Jeddo Tunnel discharge site for a feasibility study of renewable energy potential. The purpose of this report is to assess technical and economic viability of the site for hydroelectric and geothermal energy production. In addition, the report outlines financing options that could assist in the implementation of a system.

  1. Pre-Feasibility Analysis of Pellet Manufacturing on the Former Loring Air Force Base Site. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Hunsberger, R.; Mosey, G.

    2014-04-01

    The U.S. Environmental Protection Agency (EPA) Office of Solid Waste and Emergency Response, in accordance with the RE-Powering America's Lands initiative, engaged the U.S. Department of Energy's (DOE) National Renewable Energy Laboratory (NREL) to conduct feasibility studies to assess the viability of developing renewable energy generating facilities on contaminated sites. This site, in Limestone, Maine -- formerly the location of the Loring Air Force Base but now owned by the Aroostook Band of Micmac -- was selected for the potential to produce heating pellets from woody feedstock. Biomass was chosen as the renewable energy resource to evaluate based on abundant woody-biomass resources available in the area. NREL also evaluates potential savings from converting existing Micmac property from oil-fired heating to pellet heating.

  2. The 3-D geological model around Chang'E-3 landing site based on lunar penetrating radar Channel 1 data

    Science.gov (United States)

    Yuan, Yuefeng; Zhu, Peimin; Zhao, Na; Xiao, Long; Garnero, Edward; Xiao, Zhiyong; Zhao, Jiannan; Qiao, Le

    2017-07-01

    High-frequency lunar penetrating radar (LPR) data from an instrument on the lunar rover Yutu, from the Chang'E-3 (CE-3) robotic lander, were used to build a three-dimensional (3-D) geological model of the lunar subsurface structure. The CE-3 landing site is in the northern Mare Imbrium. More than five significant reflection horizons are evident in the LPR profile, which we interpret as different period lava flow sequences deposited on the lunar surface. The most probable directions of these flows were inferred from layer depths, thicknesses, and other geological information. Moreover, the apparent Imbrian paleoregolith homogeneity in the profile supports the suggestion of a quiescent period of lunar surface evolution. Similar subsurface structures are found at the NASA Apollo landing sites, indicating that the cause and time of formation of the imaged phenomena may be similar between the two distant regions.

  3. 1993 report on Hanford Site land disposal restrictions for mixed wastes

    International Nuclear Information System (INIS)

    Black, D.

    1993-04-01

    Since the early 1940s, the contractors at the Hanford Site have been involved in the production and purification of nuclear defense materials. These production activities have resulted in the generation of large quantities of liquid and solid radioactive mixed waste (RMW). This waste is subject to regulation under authority of both the Resource Conservation and Recovery Act of 1976 2 (RCRA) and Atomic Energy Act 3 . This report covers mixed waste only. Hazardous waste that is not contaminated with radionuclides is not addressed in this report. The Washington State Department of Ecology, US Environmental Protection Agency, and US Department of Energy have entered into an agreement, the Hanford Federal Facility Agreement and Consent Order 1 (commonly referred to as the Tri-Party Agreement) to bring the Hanford Site operations into compliance with dangerous waste regulations. The Tri-Party Agreement required development of the original land disposal restrictions (LDR) plan and its annual updates to comply with LDR requirements for RMW. This report is the third update of the plan first issued in 1990. The Tri-Party Agreement requires, and the baseline plan and annual update reports provide, the information that follows: Waste characterization information; storage data; treatment information; waste reduction information; schedule; and progress

  4. Relation of Land Use to Streamflow and Water Quality at Selected Sites in the City of Charlotte and Mecklenburg County, North Carolina, 1993-98

    Science.gov (United States)

    Bales, Jerad D.; Weaver, J. Curtis; Robinson, Jerald B.

    1999-01-01

    Streamflow and water-quality data were collected at nine sites in the city of Charlotte and Mecklenburg County, North Carolina, during 1993–97. Six of the basins drained areas having relatively homogeneous land use and were less than 0.3 square mile in size; the other three basins had mixed land use. Atmospheric wet-deposition data were collected in three of the basins during 1997–98.Streamflow yield varied by a factor of six among the sites, despite the fact that sites were in close proximity to one another. The lowest yield occurred in a residential basin having no curbs and gutters. The variability in mean flow from these small, relatively homogeneous basins is much greater than is found in streams draining basins that are 10 square miles in size or larger. The ratio of runoff to rainfall in the developing basin appears to have increased during the study period.Low-flow suspended-sediment concentrations in the study basins were about the same magnitude as median stormflow concentrations in Piedmont agricultural basins. Sediment concentrations were higher in the mixed land-use basins and in the developing basin. Median suspended-sediment concentrations in these basins generally were an order of magnitude greater than median concentrations in the other five basins, which had stable land use.Some of the highest total nitrogen concentrations occurred in residential basins. Total nitrogen concentrations detected in this study were about twice as high as concentrations in small Piedmont streams affected by agriculture and urbanization. Most of the total nitrogen consisted of organic nitrogen at all of the sites except in two residential land- use basins. The high ammonia content of lawn fertilizer may explain the higher ammonia concentration in stormflow from residential basins.The two basins with the highest median suspended-sediment concentrations also had the highest total phosphorus concentrations. Median total phosphorus concentrations measured in this study

  5. The Role of Social Work for Foreign Residents in an Epidemic: The MERS Crisis in the Republic of Korea.

    Science.gov (United States)

    Park, Hong-Jae; Lee, Bong Joo

    2016-01-01

    This article explores the experiences of foreign residents during the period of the Middle East Respiratory Syndrome (MERS) outbreak in (South) Korea and discusses from a social work perspective the implications of their experiences and their needs. Data were obtained from interviews with 22 foreigners who either live and work or study in Korea. The data were then interpreted using a thematic analysis approach in a multilingual research context. The findings from the study show that foreign residents experienced a wide range of social and psychoemotional difficulties during the MERS health threat. Implications for social work practice in an epidemic emergency are presented.

  6. Novel Tc-99m labeled ELR-containing 6-mer peptides for tumor imaging in epidermoid carcinoma xenografts model. A pilot study

    International Nuclear Information System (INIS)

    Kim, Dae-Weung; Kim, Woo-Hyoung; Kim, Myoung-Hyoun; Kim, Chang-Guhn

    2013-01-01

    ELR-containing peptides targeting CXCR2 could be the excellent candidate for targeting ligand of molecular tumor imaging. In this study, we had developed two ELR-containing 6-mer peptides and evaluated the diagnostic performance of Tc-99m labeled 6-mer peptides as a molecular imaging agent in murine models bearing KB epidermoid carcinoma. Peptides were synthesized using Fmoc solid phase peptide synthesis. Radiolabeling efficiency with Tc-99m was evaluated using instant thin-layer chromatography. In KB epidermoid cancer-bearing mice, gamma images had acquired and tumor-to-muscle uptake ratio was calculated. Competition and biodistribution studies had performed. Two 6-mer peptides, ELR-ECG and ECG-ELR were successfully synthesized. After radiolabeling procedures with Tc-99m, the complex Tc-99m ELR-ECG and Tc-99m ECG-ELR were prepared in high yield. In the gamma camera imaging of murine model, Tc-99m ELR-ECG was substantially accumulated in the subcutaneously engrafted tumor and tumor uptake had been suppressed by the free ELR co-injection. However, Tc-99m ECG-ELR was minimally accumulated in the tumor. Two ELR-containing 6-mer peptides, ELR-ECG and ECG-ELR, were developed as a molecular imaging agent to target CXCR2 of epidermoid carcinoma. Tc-99m ELR-ECG had showed significant uptake in tumor and it was good candidate for a tumor imaging. (author)

  7. Analysis of landing site attributes for future missions targeting the rim of the lunar South Pole Aitken basin

    Science.gov (United States)

    Koebel, David; Bonerba, Michele; Behrenwaldt, Daniel; Wieser, Matthias; Borowy, Carsten

    2012-11-01

    For the South polar lunar region between -85 and -90° Latitude an updated analyses of the solar illumination and ground station visibility conditions has been performed in the frame of a feasibility study for an ESA Lunar Lander mission. The analyses are based on the refined lunar digital elevation model provided by the Japanese Kaguya/Selene mission, originating from its LASER altimeter instrument. For the South polar region maps of integral solar illumination are presented for a mission epoch in 2016. The analysis modelling was validated with the help of a Kaguya High Definition video. The solar illumination is driving for the power subsystems of any robotic lander craft or manned lunar outpost, in case they rely on conventional photovoltaic power generation with battery buffering of shadowed periods. In addition the visibility of the terrain from a terrestrial ESA ground station was analysed. The results are presented as an integral ground contact duration map, being crucial for the operations of any lunar outpost. Considering these two quality criteria, several possible landing sites for a future lunar mission have been pre-selected. For these sites a detailed analysis of quasi-continuous illumination conditions is presented. This includes magnified maps of the pre-selected areas, showing any location's longest illumination intervals that are allowed to be interrupted by shadows with limited duration only. As a final quality criterion, the terrain topology has been analysed for its impact on the landing trajectory. From a trade-off between the three quality criteria the connecting ridge between the Shackleton and the de Gerlache was determined to provide the most favourable landing site quality. This site is located at 89°28' South, 136°40' West, and 1947 m altitude, and features and integral illumination of 85.7%. With battery energy to sustain shadows of 120 h, total mission duration of 9.37 sidereal months can be guaranteed.

  8. Geochemical investigations and interim recommendations for priority abandoned mine sites, BLM lands, upper Animas River watershed, San Juan County, Colorado

    Science.gov (United States)

    Nash, J. Thomas

    1999-01-01

    Field observations, sampling of mine dumps and mine drainage waters, and laboratory studies of dump materials have been made at mining areas deemed to be on public lands administered by the U. S. Bureau of Land Management (BLM) in the Upper Animas River watershed. Results of chemical analyses of dump materials, leachates of those materials, and surface waters draining mines or dumps provide indications of where acid is generated or consumed, and metal concentrations below mines or dumps. Information on sites previously identified as needing reclamation is reviewed and available geochemical information is used to rank 26 sites into four classes of priority for reclamation. Although there are more than a thousand mining sites (productive mines and prospects) on BLM lands in the Upper Animas River watershed study area, the majority are very small (less than about 70 cubic yards of dump material), are more than 2 miles from a major stream, or so inaccessible as to prohibit reclamation. In the summers of 1997 and 1998 approximately 200 sites were observed and more than 100 of these that appeared to have the potential to geochemically impact the watershed were examined more carefully and sampled. Building upon the prior work of the BLM and associated agencies, this work attempted to identify the most significant sources of mine-related contamination and to rank those sites as to priority for reclamation. These most significant mining areas have been examined within a geologic framework and were evaluated by multiple criteria, including tendency to generate acid and release toxic metals, observed damage to vegetation, potential to release metals based on leach tests, and likelihood of transport into streams of the watershed. No single measurable parameter, such as metal concentration, can be used to rank the sites. Rather, subjective estimates are required to evaluate combinations or interactions among several parameters. The most subjective estimate, while ranking

  9. Future land use plan

    International Nuclear Information System (INIS)

    1995-01-01

    The US Department of Energy's (DOE) changing mission, coupled with the need to apply appropriate cleanup standards for current and future environmental restoration, prompted the need for a process to determine preferred Future Land Uses for DOE-owned sites. DOE began the ''Future Land Use'' initiative in 1994 to ensure that its cleanup efforts reflect the surrounding communities' interests in future land use. This plan presents the results of a study of stakeholder-preferred future land uses for the Brookhaven National Laboratory (BNL), located in central Long Island, New York. The plan gives the Laboratory's view of its future development over the next 20 years, as well as land uses preferred by the community were BNL ever to cease operations as a national laboratory (the post-BNL scenario). The plan provides an overview of the physical features of the site including its history, topography, geology/hydrogeology, biological inventory, floodplains, wetlands, climate, and atmosphere. Utility systems and current environmental operations are described including waste management, waste water treatment, hazardous waste management, refuse disposal and ground water management. To complement the physical descriptions of the site, demographics are discussed, including overviews of the surrounding areas, laboratory population, and economic and non-economic impacts

  10. Future land use plan

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1995-08-31

    The US Department of Energy`s (DOE) changing mission, coupled with the need to apply appropriate cleanup standards for current and future environmental restoration, prompted the need for a process to determine preferred Future Land Uses for DOE-owned sites. DOE began the ``Future Land Use`` initiative in 1994 to ensure that its cleanup efforts reflect the surrounding communities` interests in future land use. This plan presents the results of a study of stakeholder-preferred future land uses for the Brookhaven National Laboratory (BNL), located in central Long Island, New York. The plan gives the Laboratory`s view of its future development over the next 20 years, as well as land uses preferred by the community were BNL ever to cease operations as a national laboratory (the post-BNL scenario). The plan provides an overview of the physical features of the site including its history, topography, geology/hydrogeology, biological inventory, floodplains, wetlands, climate, and atmosphere. Utility systems and current environmental operations are described including waste management, waste water treatment, hazardous waste management, refuse disposal and ground water management. To complement the physical descriptions of the site, demographics are discussed, including overviews of the surrounding areas, laboratory population, and economic and non-economic impacts.

  11. Rezension: Ada Lovelace. Die Pionierin der Computertechnik und ihre Nachfolgerinnen von Sybille Krämer (Hg.)

    OpenAIRE

    Bettina Schabschneider

    2015-01-01

    Ein aktueller von Sybille Krämer herausgegebener Sammelband beleuchtet die Bedeutung der Computertechnik-Pionierin Ada Lovelace. Bettina Schabschneider hat den Band einer detaillierten Lektüre unterzogen und für die MEDIENIMPULSE rezensiert …

  12. Lunar near-surface shear wave velocities at the Apollo landing sites as inferred from spectral amplitude ratios

    Science.gov (United States)

    Horvath, P.; Latham, G. V.; Nakamura, Y.; Dorman, H. J.

    1980-01-01

    The horizontal-to-vertical amplitude ratios of the long-period seismograms are reexamined to determine the shear wave velocity distributions at the Apollo 12, 14, 15, and 16 lunar landing sites. Average spectral ratios, computed from a number of impact signals, were compared with spectral ratios calculated for the fundamental mode Rayleigh waves in media consisting of homogeneous, isotropic, horizontal layers. The shear velocities of the best fitting models at the different sites resemble each other and differ from the average for all sites by not more than 20% except for the bottom layer at station 14. The shear velocities increase from 40 m/s at the surface to about 400 m/s at depths between 95 and 160 m at the various sites. Within this depth range the velocity-depth functions are well represented by two piecewise linear segments, although the presence of first-order discontinuities cannot be ruled out.

  13. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Chino Mine in Silver City, New Mexico. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Kiatreungwattana, K.; Geiger, J.; Healey, V.; Mosey, G.

    2013-04-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Chino Mine site in Silver City, New Mexico, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  14. Site characterization techniques used at a low-level waste shallow land burial field demonstration facility

    International Nuclear Information System (INIS)

    Davis, E.C.; Boegly, W.J. Jr.; Rothschild, E.R.

    1984-07-01

    The Environmental Sciences Division of the Oak Ridge National Laboratory has been investigating improved shallow land burial technology for application in the humd eastern United States. As part of this effort, a field demonstration facility (Engineered Test Facility, or ETF) has been established in Solid Waste Storage Area 6 for purposes of investigatig the ability of two trench treatments (waste grouting prior to cover emplacement and waste isolation with trench liners) to prevent water-waste contact and thus minimize waste leaching. As part of the experimental plan, the ETF site has been characterized for purposes of constructing a hydrologic model. Site characterization is an extremely important component of the waste disposal site selection process; during these activities, potential problems, which might obviate the site from further consideration, may be found. This report describes the ETF site characterization program and identifies and, where appropriate, evaluates those tests that are of most value in model development. Specific areas covered include site geology, soils, and hydrology. Each of these areas is further divided into numerous subsections, making it easy for the reader to examine a single area of interest. Site characterization is a multidiscipliary endeavor with voluminous data, only portions of which are presented and analyzed here. The information in this report is similar to that which will be required of a low-level waste site developer in preparing a license application for a potential site in the humid East, (a discussion of licensing requirements is beyond its scope). Only data relevant to hydrologic model development are included, anticipating that many of these same characterization methods will be used at future disposal sites with similar water-related problems

  15. Site characterization techniques used at a low-level waste shallow land burial field demonstration facility

    Energy Technology Data Exchange (ETDEWEB)

    Davis, E.C.; Boegly, W.J. Jr.; Rothschild, E.R.; Spalding, B.P.; Vaughan, N.D.; Haase, C.S.; Huff, D.D.; Lee, S.Y.; Walls, E.C.; Newbold, J.D.

    1984-07-01

    The Environmental Sciences Division of the Oak Ridge National Laboratory has been investigating improved shallow land burial technology for application in the humd eastern United States. As part of this effort, a field demonstration facility (Engineered Test Facility, or ETF) has been established in Solid Waste Storage Area 6 for purposes of investigatig the ability of two trench treatments (waste grouting prior to cover emplacement and waste isolation with trench liners) to prevent water-waste contact and thus minimize waste leaching. As part of the experimental plan, the ETF site has been characterized for purposes of constructing a hydrologic model. Site characterization is an extremely important component of the waste disposal site selection process; during these activities, potential problems, which might obviate the site from further consideration, may be found. This report describes the ETF site characterization program and identifies and, where appropriate, evaluates those tests that are of most value in model development. Specific areas covered include site geology, soils, and hydrology. Each of these areas is further divided into numerous subsections, making it easy for the reader to examine a single area of interest. Site characterization is a multidiscipliary endeavor with voluminous data, only portions of which are presented and analyzed here. The information in this report is similar to that which will be required of a low-level waste site developer in preparing a license application for a potential site in the humid East, (a discussion of licensing requirements is beyond its scope). Only data relevant to hydrologic model development are included, anticipating that many of these same characterization methods will be used at future disposal sites with similar water-related problems.

  16. Idaho National Laboratory Comprehensive Land Use and Environmental Stewardship Report

    Energy Technology Data Exchange (ETDEWEB)

    No name listed on publication

    2011-08-01

    Land and facility use planning and decisions at the Idaho National Laboratory (INL) Site are guided by a comprehensive site planning process in accordance with Department of Energy Policy 430.1, 'Land and Facility Use Policy,' that integrates mission, economic, ecologic, social, and cultural factors. The INL Ten-Year Site Plan, prepared in accordance with Department of Energy Order 430.1B, 'Real Property Asset Management,' outlines the vision and strategy to transform INL to deliver world-leading capabilities that will enable the Department of Energy to accomplish its mission. Land use planning is the overarching function within real property asset management that integrates the other functions of acquisition, recapitalization, maintenance, disposition, real property utilization, and long-term stewardship into a coordinated effort to ensure current and future mission needs are met. All land and facility use projects planned at the INL Site are considered through a formal planning process that supports the Ten-Year Site Plan. This Comprehensive Land Use and Environmental Stewardship Report describes that process. The land use planning process identifies the current condition of existing land and facility assets and the scope of constraints across INL and in the surrounding region. Current land use conditions are included in the Comprehensive Land Use and Environmental Stewardship Report and facility assets and scope of constraints are discussed in the Ten-Year Site Plan. This report also presents the past, present, and future uses of land at the INL Site that are considered during the planning process, as well as outlining the future of the INL Site for the 10, 30, and 100-year timeframes.

  17. Avoiding student infection during a Middle East respiratory syndrome (MERS) outbreak: a single medical school experience.

    Science.gov (United States)

    Park, Seung Won; Jang, Hye Won; Choe, Yon Ho; Lee, Kyung Soo; Ahn, Yong Chan; Chung, Myung Jin; Lee, Kyu-Sung; Lee, Kyunghoon; Han, Taehee

    2016-06-01

    In outbreaks of infectious disease, medical students are easily overlooked in the management of healthcare personnel protection although they serve in clinical clerkships in hospitals. In the early summer of 2015, Middle East respiratory syndrome (MERS) struck South Korea, and students of Sungkyunkwan University School of Medicine (SKKUSOM) were at risk of contracting the disease. The purpose of this report is to share SKKUSOM's experience against the MERS outbreak and provide suggestions for medical schools to consider in the face of similar challenges. Through a process of reflection-on-action, we examined SKKUSOM's efforts to avoid student infection during the MERS outbreak and derived a few practical guidelines that medical schools can adopt to ensure student safety in outbreaks of infectious disease. The school leadership conducted ongoing risk assessment and developed contingency plans to balance student safety and continuity in medical education. They rearranged the clerkships to another hospital and offered distant lectures and tutorials. Five suggestions are extracted for medical schools to consider in infection outbreaks: instant cessation of clinical clerkships; rational decision making on a school closure; use of information technology; constant communication with hospitals; and open communication with faculty, staff, and students. Medical schools need to take the initiative and actively seek countermeasures against student infection. It is essential that medical schools keep constant communication with their index hospitals and the involved personnel. In order to assure student learning, medical schools may consider offering distant education with online technology.

  18. Multi-site evaluation of the JULES land surface model using global and local data

    Directory of Open Access Journals (Sweden)

    D. Slevin

    2015-02-01

    Full Text Available This study evaluates the ability of the JULES land surface model (LSM to simulate photosynthesis using local and global data sets at 12 FLUXNET sites. Model parameters include site-specific (local values for each flux tower site and the default parameters used in the Hadley Centre Global Environmental Model (HadGEM climate model. Firstly, gross primary productivity (GPP estimates from driving JULES with data derived from local site measurements were compared to observations from the FLUXNET network. When using local data, the model is biased with total annual GPP underestimated by 16% across all sites compared to observations. Secondly, GPP estimates from driving JULES with data derived from global parameter and atmospheric reanalysis (on scales of 100 km or so were compared to FLUXNET observations. It was found that model performance decreases further, with total annual GPP underestimated by 30% across all sites compared to observations. When JULES was driven using local parameters and global meteorological data, it was shown that global data could be used in place of FLUXNET data with a 7% reduction in total annual simulated GPP. Thirdly, the global meteorological data sets, WFDEI and PRINCETON, were compared to local data to find that the WFDEI data set more closely matches the local meteorological measurements (FLUXNET. Finally, the JULES phenology model was tested by comparing results from simulations using the default phenology model to those forced with the remote sensing product MODIS leaf area index (LAI. Forcing the model with daily satellite LAI results in only small improvements in predicted GPP at a small number of sites, compared to using the default phenology model.

  19. Duean sip, théâtre de l’ethnorégionalisme sud. Les nomades de la mer et le cycle rituel du dixième mois dans la province de Phang Nga (sud de la Thaïlande) Duean sip, Theater of the Southern Ethnoregionalism. The Sea Nomads and the Tenth Lunar Month Ritual Complex in the Phang Nga Province (Southern Thailand)

    OpenAIRE

    Olivier Ferrari

    2012-01-01

    La cérémonie bouddhique du dixième mois lunaire, connue comme la fête des morts et des revenants, revêt dans la région de Phang Nga, au sud de la Thaïlande une importance et un rôle qui vont bien au-delà de sa signification religieuse. Il s’agit en effet d’un complexe rituel qui, en s’emboîtant avec les cérémonies du festival végétarien des Sino-Thaïs et avec d’autres cérémonies propres aux nomades de la mer (Moken, Moklen et Urak Lawoi), met en scène les fondements des relations interethniqu...

  20. The properties of the lunar regolith at Chang'e-3 landing site: A study based on LPR data

    Science.gov (United States)

    Feng, J.; Su, Y.; Xing, S.; Ding, C.; Li, C.

    2015-12-01

    In situ sampling from surface is difficult in the exploration of planets and sometimes radar sensing is a better choice. The properties of the surface material such as permittivity, density and depth can be obtained by a surface penetrating radar. The Chang'e-3 (CE-3) landed in the northern Mare Imbrium and a Lunar Penetrating Radar (LPR) is carried on the Yutu rover to detect the shallow structure of the lunar crust and the properties of the lunar regolith, which will give us a close look at the lunar subsurface. We process the radar data in a way which consist two steps: the regular preprocessing step and migration step. The preprocessing part includes zero time correction, de-wow, gain compensation, DC removal, geometric positioning. Then we combine all radar data obtained at the time the rover was moving, and use FIR filter to reduce the noise in the radar image with a pass band frequency range 200MHz-600MHz. A normal radar image is obtained after the preprocessing step. Using a nonlinear least squares fitting method, we fit the most hyperbolas in the radar image which are caused by the buried objects or rocks in the regolith and estimate the EM wave propagation velocity and the permittivity of the regolith. For there is a fixed mathematical relationship between dielectric constant and density, the density profile of the lunar regolith is also calculated. It seems that the permittivity and density at the landing site is larger than we thought before. Finally with a model of variable velocities, we apply the Kirchhoff migration method widely used in the seismology to transform the the unfocused space-time LPR image to a focused one showing the object's (most are stones) true location and size. From the migrated image, we find that the regolith depth in the landing site is smaller than previous study and the stone content rises rapidly with depth. Our study suggests that the landing site is a young region and the reworked history of the surface is short, which is

  1. Rezension: Ada Lovelace. Die Pionierin der Computertechnik und ihre Nachfolgerinnen von Sybille Krämer (Hg.

    Directory of Open Access Journals (Sweden)

    Bettina Schabschneider

    2015-12-01

    Full Text Available Ein aktueller von Sybille Krämer herausgegebener Sammelband beleuchtet die Bedeutung der Computertechnik-Pionierin Ada Lovelace. Bettina Schabschneider hat den Band einer detaillierten Lektüre unterzogen und für die MEDIENIMPULSE rezensiert …

  2. Prevalence of MERS-CoV nasal carriage and compliance with the Saudi health recommendations among pilgrims attending the 2013 Hajj.

    Science.gov (United States)

    Memish, Ziad A; Assiri, Abdullah; Almasri, Malak; Alhakeem, Rafat F; Turkestani, Abdulhafeez; Al Rabeeah, Abdullah A; Al-Tawfiq, Jaffar A; Alzahrani, Abdullah; Azhar, Essam; Makhdoom, Hatem Q; Hajomar, Waleed H; Al-Shangiti, Ali M; Yezli, Saber

    2014-10-01

    Annually, Saudi Arabia is the host of the Hajj mass gathering. We aimed to determine the Middle East respiratory syndrome coronavirus (MERS-CoV) nasal carriage rate among pilgrims performing the 2013 Hajj and to describe the compliance with the Saudi Ministry of Health vaccine recommendations. Nasopharyngeal samples were collected from 5235 adult pilgrims from 22 countries and screened for MERS-CoV using reverse transcriptase-polymerase chain reaction. Information regarding the participants' age, gender, country of origin, medical conditions, and vaccination history were obtained. The mean age of the screened population was 51.8 years (range, 18-93 years) with a male/female ratio of 1.17:1. MERS-CoV was not detected in any of the samples tested (3210 pre-Hajj and 2025 post-Hajj screening). According to the vaccination documents, all participants had received meningococcal vaccination and the majority of those from at-risk countries were vaccinated against yellow fever and polio. Only 22% of the pilgrims (17.5% of those ≥65 years and 36.3% of diabetics) had flu vaccination, and 4.4% had pneumococcal vaccination. There was no evidence of MERS-CoV nasal carriage among Hajj pilgrims. While rates of compulsory vaccinations uptake were high, uptake of pneumococcal and flu seasonal vaccinations were low, including among the high-risk population. © The Author 2014. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  3. Calendar Year 2002 Hanford Site mixed waste land disposal restrictions report (section 1 thru 3)

    International Nuclear Information System (INIS)

    MISKHO, A.G.

    2003-01-01

    Volume 1 presents information concerning the storage and minimization of mixed waste and the potential sources for the generation of additional mixed waste. This information, presented in accordance with ''Hanford Federal Facility Agreement and Consent Order'' (Tri-Party Agreement) (Ecology et al. 2001) Milestone M-26-01M, is Volume 1 of a two-volume report on the status of Hanford Site land disposal restricted mixed waste, other mixed waste, and other waste that the U.S. Department of Energy (DOE), Washington State Department of Ecology (Ecology), and US. Environmental Protection Agency (EPA) have agreed to include in this report. This volume contains the approval page for both volumes and includes the storage report. Information pertaining to waste characterization and treatment are addressed in Volume 2. Appendix A lists the land disposal restrictions (LDR) reporting requirements and explains where the requirements are addressed in this report. The reporting period for this document is from January 1, 2002, to December 31, 2002. Clearance form only sent to RHA

  4. Effects of hydrologic connectivity and land use on floodplain sediment accumulation at the Savannah River Site, South Carolina.

    Energy Technology Data Exchange (ETDEWEB)

    Eddy, Jeremy Edward [Univ. of Kentucky, Lexington, KY (United States)

    2017-12-28

    Floodplains, and the sediment accumulating naturally on them,are important to maintain stream water quality and serve as sinks for organic and inorganic carbon. Newer theories contend that land use and hydrologic connectivity (water-mediated transport of matter, energy, and/or organisms within or between elements of the hydrologic cycle) play important roles in determining sediment accumulation on floodplains. This study hypothesizes that changes in hydrologic connectivity have a greater impact on floodplain sediment accumulation than changes in land use. Nine sediment cores from seven sub-basins were collected from the Savannah River Site (SRS), South Carolina, and processed for grain-size, radionuclide dating (7Be, 137Cs, 210Pb), particulate organic carbon (POC), and microscopy. Historical records, including aerial and satellite imagery,were used to identify anthropogenic disturbances in the sub-basins, as well as to calculate the percentages of natural vegetation land cover at the SRS in 1951, and 2014. LiDAR and field survey data identified 251 flow impediments, measured elevation, and recorded standard stream characteristics (e.g., bank height) that canaffect hydrologic connectivity. Radionuclide dating was used to calculate sediment mass accumulation rates (MARs) and linear accumulation rates (LARs) for each core. Results indicate that sedimentation rates have increased across all SRS sub-basins over the past 40-50 years, shortly after site restoration and recovery efforts began.Findings show that hydrologic connectivity proxies (i.e., stream characteristics and impediments) have stronger relationships to MARs and LARs than the land use proxy (i.e., vegetation cover), confirming the hypothesis. Asstream channel depth and the number of impediments increase,floodplain sedimentation rates also increase. This knowledge can help future stream restoration efforts by focusing resources to more efficiently attain stated goals, particularly in terms of floodplain

  5. Recapitulating phylogenies using k-mers: from trees to networks.

    Science.gov (United States)

    Bernard, Guillaume; Ragan, Mark A; Chan, Cheong Xin

    2016-01-01

    Ernst Haeckel based his landmark Tree of Life on the supposed ontogenic recapitulation of phylogeny, i.e. that successive embryonic stages during the development of an organism re-trace the morphological forms of its ancestors over the course of evolution. Much of this idea has since been discredited. Today, phylogenies are often based on families of molecular sequences. The standard approach starts with a multiple sequence alignment, in which the sequences are arranged relative to each other in a way that maximises a measure of similarity position-by-position along their entire length. A tree (or sometimes a network) is then inferred. Rigorous multiple sequence alignment is computationally demanding, and evolutionary processes that shape the genomes of many microbes (bacteria, archaea and some morphologically simple eukaryotes) can add further complications. In particular, recombination, genome rearrangement and lateral genetic transfer undermine the assumptions that underlie multiple sequence alignment, and imply that a tree-like structure may be too simplistic. Here, using genome sequences of 143 bacterial and archaeal genomes, we construct a network of phylogenetic relatedness based on the number of shared k -mers (subsequences at fixed length k ). Our findings suggest that the network captures not only key aspects of microbial genome evolution as inferred from a tree, but also features that are not treelike. The method is highly scalable, allowing for investigation of genome evolution across a large number of genomes. Instead of using specific regions or sequences from genome sequences, or indeed Haeckel's idea of ontogeny, we argue that genome phylogenies can be inferred using k -mers from whole-genome sequences. Representing these networks dynamically allows biological questions of interest to be formulated and addressed quickly and in a visually intuitive manner.

  6. Inacessible Andean sites reveal land-use induced stabilisation of soil organic carbon

    Science.gov (United States)

    Heitkamp, Felix; Maqsood, Shafique; Sylvester, Steven; Kessler, Michael; Jungkunst, Hermann

    2015-04-01

    Human activity affects properties and development of ecosystems across the globe to such a degree that it is challenging to get baseline values for undisturbed ecosystems. This is especially true for soils, which are affected by land-use history and hold a legacy of past human interventions. Therefore, it is still largely unknown how soil would have developed "naturally" and if processes of organic matter stabilisation would be different in comparison to managed soils. Here, we show undisturbed soil development, i.e., the processes of weathering and accumulation of soil organic carbon (SOC), by comparing pristine with grazed sites in the high Andes (4500 m) of southern Peru. We located study plots on a large ledge (0.2 km²) that is only accessible with mountaineering equipment. Plots with pristine vegetation were compared to rangeland plots that were constantly under grazing management for at least four millennia. All "state factors"; climate, potential biota, topography, parent material and time; besides "land-use" were, therefore, identical. Vegetation change, induced by grazing management, led to lower vegetation cover of the soil, thereby increasing soil surface temperatures and soil acidification. Both factors increased weathering in rangeland soils, as indicated by the presence of pedogenic oxides, especially amorphous Al-(oxy)hydroxides (oxalate-extractable Al). Higher losses of base cations (K, Na, Ca) and lower pH-values were related to a low base saturation of exchange sites in rangelands. Therefore, rangeland soils were classified as Umbrisol, whereas soils under pristine vegetation were classified as Phaeozeme. All profiles were rich in SOC (100 to 126 g kg-1) with no significant differences in concentrations or stocks. SOC of rangeland soils was, however, less available for microorganisms (proportion of microbial C on SOC: 1.8 vs. 0.6% in pristine and rangeland soils, respectively) and showed higher stability against thermal degradation. Reasons for

  7. Hanford Site Development Plan

    International Nuclear Information System (INIS)

    Hathaway, H.B.; Daly, K.S.; Rinne, C.A.; Seiler, S.W.

    1993-05-01

    The Hanford Site Development Plan (HSDP) provides an overview of land use, infrastructure, and facility requirements to support US Department of Energy (DOE) programs at the Hanford Site. The HSDP's primary purpose is to inform senior managers and interested parties of development activities and issues that require a commitment of resources to support the Hanford Site. The HSDP provides an existing and future land use plan for the Hanford Site. The HSDP is updated annually in accordance with DOE Order 4320.1B, Site Development Planning, to reflect the mission and overall site development process. Further details about Hanford Site development are defined in individual area development plans

  8. Molecular dynamics of Middle East Respiratory Syndrome Coronavirus (MERS CoV) fusion heptad repeat trimers

    KAUST Repository

    Kandeel, Mahmoud

    2018-05-17

    Structural studies related to Middle East Respiratory Syndrome Coronavirus (MERS CoV) infection process are so limited. In this study, molecular dynamics (MD) simulation was carried out to unravel changes in the MERS CoV heptad repeat domains (HRs) and factors affecting fusion state HR stability. Results indicated that HR trimer is more rapidly stabilized, having stable system energy and lowest root mean square deviations (RMSDs). While trimers were the predominant active form of CoVs HR, monomers were also discovered in both of viral and cellular membranes. In order to find the differences between S2 monomer and trimer molecular dynamics, S2 monomer were modelled and subjected to MD simulation. In contrast to S2 trimer, S2 monomer was unstable, having high RMSDs with major drifts above 8 Å. Fluctuation of HR residue positions revealed major changes in the C-terminal of HR2 and the linker coil between HR1 and HR2 in both monomer and trimer. Hydrophobic residues at the “a” and “d” positions of HR helices stabilize the whole system, having minimal changes in RMSD. The global distance test and contact area difference scores support instability of MERS CoV S2 monomer. Analysis of HR1-HR2 inter-residue contacts and interaction energy revealed three different energy scales along HR helices. Two strong interaction energies were identified at the start of the HR2 helix and at the C-terminal of HR2. The identified critical residues by MD simulation and residues at a and d position of HR helix were strong stabilizers of HRs recognition.

  9. Mars Exploration Rovers Landing Dispersion Analysis

    Science.gov (United States)

    Knocke, Philip C.; Wawrzyniak, Geoffrey G.; Kennedy, Brian M.; Desai, Prasun N.; Parker, TImothy J.; Golombek, Matthew P.; Duxbury, Thomas C.; Kass, David M.

    2004-01-01

    Landing dispersion estimates for the Mars Exploration Rover missions were key elements in the site targeting process and in the evaluation of landing risk. This paper addresses the process and results of the landing dispersion analyses performed for both Spirit and Opportunity. The several contributors to landing dispersions (navigation and atmospheric uncertainties, spacecraft modeling, winds, and margins) are discussed, as are the analysis tools used. JPL's MarsLS program, a MATLAB-based landing dispersion visualization and statistical analysis tool, was used to calculate the probability of landing within hazardous areas. By convolving this with the probability of landing within flight system limits (in-spec landing) for each hazard area, a single overall measure of landing risk was calculated for each landing ellipse. In-spec probability contours were also generated, allowing a more synoptic view of site risks, illustrating the sensitivity to changes in landing location, and quantifying the possible consequences of anomalies such as incomplete maneuvers. Data and products required to support these analyses are described, including the landing footprints calculated by NASA Langley's POST program and JPL's AEPL program, cartographically registered base maps and hazard maps, and flight system estimates of in-spec landing probabilities for each hazard terrain type. Various factors encountered during operations, including evolving navigation estimates and changing atmospheric models, are discussed and final landing points are compared with approach estimates.

  10. Avoiding student infection during a Middle East respiratory syndrome (MERS outbreak: a single medical school experience

    Directory of Open Access Journals (Sweden)

    Seung Won Park

    2016-06-01

    Full Text Available Purpose: In outbreaks of infectious disease, medical students are easily overlooked in the management of healthcare personnel protection although they serve in clinical clerkships in hospitals. In the early summer of 2015, Middle East respiratory syndrome (MERS struck South Korea, and students of Sungkyunkwan University School of Medicine (SKKUSOM were at risk of contracting the disease. The purpose of this report is to share SKKUSOM’s experience against the MERS outbreak and provide suggestions for medical schools to consider in the face of similar challenges. Methods: Through a process of reflection-on-action, we examined SKKUSOM’s efforts to avoid student infection during the MERS outbreak and derived a few practical guidelines that medical schools can adopt to ensure student safety in outbreaks of infectious disease. Results: The school leadership conducted ongoing risk assessment and developed contingency plans to balance student safety and continuity in medical education. They rearranged the clerkships to another hospital and offered distant lectures and tutorials. Five suggestions are extracted for medical schools to consider in infection outbreaks: instant cessation of clinical clerkships; rational decision making on a school closure; use of information technology; constant communication with hospitals; and open communication with faculty, staff, and students. Conclusion: Medical schools need to take the initiative and actively seek countermeasures against student infection. It is essential that medical schools keep constant communication with their index hospitals and the involved personnel. In order to assure student learning, medical schools may consider offering distant education with online technology.

  11. Coal mine site reclamation

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2013-02-15

    Coal mine sites can have significant effects on local environments. In addition to the physical disruption of land forms and ecosystems, mining can also leave behind a legacy of secondary detrimental effects due to leaching of acid and trace elements from discarded materials. This report looks at the remediation of both deep mine and opencast mine sites, covering reclamation methods, back-filling issues, drainage and restoration. Examples of national variations in the applicable legislation and in the definition of rehabilitation are compared. Ultimately, mine site rehabilitation should return sites to conditions where land forms, soils, hydrology, and flora and fauna are self-sustaining and compatible with surrounding land uses. Case studies are given to show what can be achieved and how some landscapes can actually be improved as a result of mining activity.

  12. Migration studies at the Savannah River Plant shallow land burial site

    International Nuclear Information System (INIS)

    Stone, J.A.; Oblath, S.B.; Hawkins, R.H.; Emslie, R.H.; Ryan, J.P. Jr.; King, C.M.

    1983-01-01

    Radionuclide migration from the Savannah River Plant low-level waste burial ground was studied in ongoing programs that provide generic data on a shallow land burial site in a humid region and support local waste disposal operations. Field, laboratory, and theoretical work continued in four areas. (1) Subsurface Monitoring: Groundwater around the burial ground was monitored for traces of radioactivity and mercury. (2) Lysimeter Tests: Gamma-emitting radionuclides were identified by sensitive methods in defense waste lysimeter percolate waters. Results from these and other lysimeters containing tritium, I-129, or Pu-239 sources are given. (3) Soil-Water Chemistry: Experiments on specific factors affecting migration of Cs-137 showed that potassium significantly increases cesium mobility, thus confirming observations with trench waters. Distribution coefficients for ruthenium were measured. (4) Transport Modeling: Efforts to refine and validate the SRL dose-to-man model continued. Transport calculations were made for tritium, Sr-90, Tc-99, and TRU radionuclides. 12 references, 3 tables

  13. Soils and hydrology of the Ranger uranium mine land application site

    International Nuclear Information System (INIS)

    Willett, I.R.; Charters, C.J.; Bond, W.J.

    1992-01-01

    This paper describes the soils and hydrology of an area between Ranger Uranium Mine and Magela Creek, Northern Territory, which is being used for the disposal of retention pond water by irrigation. The soils of an alternative site are also described in less detail. The soil survey of the irrigated area indicated three mapping units differentiated on the basis of texture, colour depth, drainage and the presence of absence of ferricrete. The predominant soils in each unit were yellow earths, red earths and siliceous sands. All the soils had high (20-50%) gravel contents consisting of quartz and ferruginous materials. The gavel is expected to have little ability to retain solutes and therefore reduces the effectiveness of the bulk soil to retain solutes. The soils are generally low in clay (<20%) and organic matter <1%) and are acidic. The clay minerals were of the low activity types, predominantly kaolinite. Consequently the cation exchange capacities of the soils were very low indicating a limited capacity to retain cations. Preliminary calculations showed that the soils would be unable to retain all the cations in the applied water. In order to assess whether redox reactions are likely to be involved in the retention of radionuclides, the responses of the soils to saturation were tested in a laboratory experiment. The implications of these results for the retention of metals and radionuclides were discussed. All soils were found to have high permeabilities. Preliminary calculations showed that transmission of irrigation water to the water table would be rapid (less than 6 weeks). The soils of the alternative site were generally heavier and contained less gravel than those of the current irrigation site. They are likely to retain more solutes than the soils of the current irrigated area and may be better suited to land disposal of retention pond water. 20 refs., 6 tabs., 5 figs

  14. Tailoring subunit vaccine immunity with adjuvant combinations and delivery routes using the Middle East respiratory coronavirus (MERS-CoV receptor-binding domain as an antigen.

    Directory of Open Access Journals (Sweden)

    Jiaming Lan

    Full Text Available The development of an effective vaccine is critical for prevention of a Middle East respiratory syndrome coronavirus (MERS-CoV pandemic. Some studies have indicated the receptor-binding domain (RBD protein of MERS-CoV spike (S is a good candidate antigen for a MERS-CoV subunit vaccine. However, highly purified proteins are typically not inherently immunogenic. We hypothesised that humoral and cell-mediated immunity would be improved with a modification of the vaccination regimen. Therefore, the immunogenicity of a novel MERS-CoV RBD-based subunit vaccine was tested in mice using different adjuvant formulations and delivery routes. Different vaccination regimens were compared in BALB/c mice immunized 3 times intramuscularly (i.m. with a vaccine containing 10 µg of recombinant MERS-CoV RBD in combination with either aluminium hydroxide (alum alone, alum and polyriboinosinic acid (poly I:C or alum and cysteine-phosphate-guanine (CpG oligodeoxynucleotides (ODN. The immune responses of mice vaccinated with RBD, incomplete Freund's adjuvant (IFA and CpG ODN by a subcutaneous (s.c. route were also investigated. We evaluated the induction of RBD-specific humoral immunity (total IgG and neutralizing antibodies and cellular immunity (ELISpot assay for IFN-γ spot-forming cells and splenocyte cytokine production. Our findings indicated that the combination of alum and CpG ODN optimized the development of RBD-specific humoral and cellular immunity following subunit vaccination. Interestingly, robust RBD-specific antibody and T-cell responses were induced in mice immunized with the rRBD protein in combination with IFA and CpG ODN, but low level of neutralizing antibodies were elicited. Our data suggest that murine immunity following subunit vaccination can be tailored using adjuvant combinations and delivery routes. The vaccination regimen used in this study is promising and could improve the protection offered by the MERS-CoV subunit vaccine by eliciting

  15. Land Use Control Implementation Plan

    Science.gov (United States)

    Starr, Andrew Scott

    2015-01-01

    This Land Use Control Implementation Plan (LUCIP) has been prepared to inform current and potential future users of Building M7-505 of institutional controls that have been implemented at the site. Although there are no current unacceptable risks to human health or the environment associated with Building M7-505, institutional land use controls (LUCs) are necessary to prohibit the use of groundwater from the site. LUCs are also necessary to prevent access to soil under electrical equipment in the northwest portion of the site. Controls necessary to prevent human exposure will include periodic inspection, condition certification, and agency notification.

  16. A protein that binds to the P1 origin core and the oriC 13mer region in a methylation-specific fashion is the product of the host seqA gene.

    Science.gov (United States)

    Brendler, T; Abeles, A; Austin, S

    1995-08-15

    The P1 plasmid replication origin P1oriR is controlled by methylation of four GATC adenine methylation sites within heptamer repeats. A comparable (13mer) region is present in the host origin, oriC. The two origins show comparable responses to methylation; negative control by recognition of hemimethylated DNA (sequestration) and a positive requirement for methylation for efficient function. We have isolated a host protein that recognizes the P1 origin region only when it is isolated from a strain proficient for adenine methylation. The substantially purified 22 kDa protein also binds to the 13mer region of oriC in a methylation-specific fashion. It proved to be the product of the seqA gene that acts in the negative control of oriC by sequestration. We conclude that the role of the SeqA protein in sequestration is to recognize the methylation state of P1oriR and oriC by direct DNA binding. Using synthetic substrates we show that SeqA binds exclusively to the hemimethylated forms of these origins forms that are the immediate products of replication in a methylation-proficient strain. We also show that the protein can recognize sequences with multiple GATC sites, irrespective of the surrounding sequence. The basis for origin specificity is primarily the persistence of hemimethylated forms that are over-represented in the natural. DNA preparations relative to controls.

  17. Land reclamation program description

    Energy Technology Data Exchange (ETDEWEB)

    None

    1977-05-01

    The Land Reclamation Program will address the need for coordinated applied and basic research into the physical and ecological problems of land reclamation, and advance the development of cost-effective techniques for reclaiming and rehabilitating mined coal land to productive end uses. The purpose of this new program is to conduct integrated research and development projects focused on near- and long-term reclamation problems in all major U.S. coal resource regions including Alaska and to coordinate, evaluate, and disseminate the results of related studies conducted at other research institutions. The activities of the Land Reclamation Laboratory program will involve close cooperation with industry and focus on establishing a comprehensive field and laboratory effort. Research demonstration sites will be established throughout the United States to address regional and site-specific problems. Close cooperation with related efforts at academic institutions and other agencies, to transfer pertinent information and avoid duplication of effort, will be a primary goal of the program. The major effort will focus on the complete coal extraction/reclamation cycle where necessary to develop solutions to ameliorating the environmental impacts of coal development. A long-range comprehensive national reclamation program will be established that can schedule and prioritize research activities in all of the major coal regions. A fully integrated data management system will be developed to store and manage relevant environmental and land use data. Nine research demonstration sites have been identified.

  18. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Ft. Hood Military Base Outside Killeen, Texas. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Geiger, J.; Lisell, L.; Mosey, G.

    2013-10-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative through the Region 6 contract, selected Ft. Hood Army Base in Killeen, Texas, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this study is to assess the site for possible photovoltaic (PV) system installations and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  19. Decommissioning of commercial shallow-land burial sites

    International Nuclear Information System (INIS)

    Murphy, E.S.; Holter, G.M.

    1979-01-01

    Estimated costs and safety considerations for decommissioning LLW burial grounds have been evaluated. Calculations are based on a generic burial ground assumed to be located at a western and an eastern site. Decommissioning modes include: (1) site stabilization followed by long-term care of the site; and (2) waste relocation. Site stabilization is estimated to cost from $0.4 million to $7.5 million, depending on the site and the stabilization option chosen. Long-term care is estimated to cost about $100,000 annually, with somewhat higher costs during early years because of increased site maintenance and environmental monitoring requirements. Long-term care is required until the site is released for unrestricted public use. Occupational and public safety impacts of site stabilization and long-term care are estimated to be small. Relocation of all the waste from a reference burial ground is estimated to cost more than $1.4 billion and to require more than 20 years for completion. Over 90% of the cost is associated with packaging, transportation, and offsite disposal of the exhumed waste. Waste relocation results in significant radiation exposure to decommissioning workers

  20. GlobeLand30 as an alternative fine-scale global land cover map

    DEFF Research Database (Denmark)

    Jokar Arsanjani, Jamal; Tayyebi, A.; Vaz, E.

    2016-01-01

    land cover information such as developing countries. In this study, we look at GlobeLand30 of 2010 for Iran in order to find out the accuracy of this dataset as well as its implications. By having looked at 6 selected study sites around larger cities representing dissimilar eco-regions covering rural...

  1. Feasibility Study of Economics and Performance of Biopower at the Chanute Air Force Base in Rantoul, Illinois. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Scarlata, C.; Mosey, G.

    2013-05-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Former Chanute Air Force Base site in Rantoul, Illinois, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) was contacted to provide technical assistance for this project. The purpose of this study was to assess the site for a possible biopower system installation and estimate the cost, performance, and impacts of different biopower options.

  2. The Environment Analysis in the CE-3 Landing Region

    Science.gov (United States)

    Mu, L.; Liu, J.; Zeng, X.; Gao, X.; Yan, W.; Zou, X.; Li, C.

    2014-12-01

    To understand the environment and select detecting objects for the Yutu Rover, NAOC used the DEM and DOM data obtained by CE-2, geological data released by USGS, and high resolution image captured by CE-3 and LRO-NAC to analyze the topographical characteristic, geologic age, Geomorphological feathers and new dust distribution in two scale levels. The first level is 45km×75km, and another one is 4km×4km. The center of the study region is the CE-3 landing site (19.51°W, 44.12°N). The following is the initial conclusions: (1) CE-3 landed on a relatively flat region in the Mare Imbrium with an elevation of -2615m. The geological age of the landing site belongs to young Eratoshenian. 10km to the north of the landing site is the older Mare Imbrium stratum, and the location of the landing site is just on the intersection area of these two stratums. (2) The landing site lies on the edge of a lunar mountain with a decline tendency from west to east, and the topographic slope and roughness of the landing region is low, which is the typical characteristic of lunar mare. There is a big crater with diameter of 430 meters in the west of the landing site, and lots of stones in different colors on the rim of this crater, shown in the Figure2. (3) By comparing the images captured by LRO-NAC before and after the landing, much lunar dust was blown away by the engine plume during the landing of CE-3. The change scope is about 60m with from east-west and 135m length from south-north. The direction of landing is from south-north, so the length is larger than the width, shown in the figure 3. (4) In the initial stage, the Yutu Rover was suggested to move in south direction and late in north direction, which would get more scientific data and result.

  3. Trees as indicators of subterranean migration of tritium at a commercial shallow land radioactive waste disposal site

    International Nuclear Information System (INIS)

    Rickard, W.H.; Kirby, L.J.

    1984-09-01

    Leaf water and tree sap collected from deciduous trees in a natural forest growing outside the fenced exclusion area of the Maxey Flats Waste Disposal Facility in eastern Kentucky, USA were radiochemically analyzed to detect movement of tritium via subterranean flows of water at depths of three meters. These data indicate that trees can be used to detect the subterranean migration of tritium from shallow land burial sites. 4 references, 5 figures, 1 table

  4. Importance of Neutralizing Monoclonal Antibodies Targeting Multiple Antigenic Sites on the Middle East Respiratory Syndrome Coronavirus Spike Glycoprotein To Avoid Neutralization Escape

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Lingshu; Shi, Wei; Chappell, James D.; Joyce, M. Gordon; Zhang, Yi; Kanekiyo, Masaru; Becker, Michelle M.; van Doremalen, Neeltje; Fischer, Robert; Wang, Nianshuang; Corbett, Kizzmekia S.; Choe, Misook; Mason, Rosemarie D.; Van Galen, Joseph G.; Zhou, Tongqing; Saunders, Kevin O.; Tatti, Kathleen M.; Haynes, Lia M.; Kwong, Peter D.; Modjarrad, Kayvon; Kong, Wing-Pui; McLellan, Jason S.; Denison, Mark R.; Munster, Vincent J.; Mascola, John R.; Graham, Barney S.; Gallagher, Tom

    2018-03-07

    ABSTRACT

    Middle East respiratory syndrome coronavirus (MERS-CoV) causes a highly lethal pulmonary infection with ~35% mortality. The potential for a future pandemic originating from animal reservoirs or health care-associated events is a major public health concern. There are no vaccines or therapeutic agents currently available for MERS-CoV. Using a probe-based single B cell cloning strategy, we have identified and characterized multiple neutralizing monoclonal antibodies (MAbs) specifically binding to the receptor-binding domain (RBD) or S1 (non-RBD) regions from a convalescent MERS-CoV-infected patient and from immunized rhesus macaques. RBD-specific MAbs tended to have greater neutralizing potency than non-RBD S1-specific MAbs. Six RBD-specific and five S1-specific MAbs could be sorted into four RBD and three non-RBD distinct binding patterns, based on competition assays, mapping neutralization escape variants, and structural analysis. We determined cocrystal structures for two MAbs targeting the RBD from different angles and show they can bind the RBD only in the “out” position. We then showed that selected RBD-specific, non-RBD S1-specific, and S2-specific MAbs given prophylactically prevented MERS-CoV replication in lungs and protected mice from lethal challenge. Importantly, combining RBD- and non-RBD MAbs delayed the emergence of escape mutations in a cell-based virus escape assay. These studies identify MAbs targeting different antigenic sites on S that will be useful for defining mechanisms of MERS-CoV neutralization and for developing more effective interventions to prevent or treat MERS-CoV infections.

    IMPORTANCEMERS-CoV causes a highly lethal respiratory infection for which no vaccines or antiviral therapeutic options are currently available. Based on continuing exposure from established reservoirs in dromedary camels and bats, transmission of MERS-CoV into humans and future outbreaks are expected. Using

  5. Etude de la performance des radars hautes-frequences CODAR et WERA pour la mesure des courants marins en presence partielle de glace de mer

    Science.gov (United States)

    Kamli, Emna

    Les radars hautes-frequences (RHF) mesurent les courants marins de surface avec une portee pouvant atteindre 200 kilometres et une resolution de l'ordre du kilometre. Cette etude a pour but de caracteriser la performance des RHF, en terme de couverture spatiale, pour la mesure des courants de surface en presence partielle de glace de mer. Pour ce faire, les mesures des courants de deux radars de type CODAR sur la rive sud de l'estuaire maritime du Saint-Laurent, et d'un radar de type WERA sur la rive nord, prises pendant l'hiver 2013, ont ete utilisees. Dans un premier temps, l'aire moyenne journaliere de la zone ou les courants sont mesures par chaque radar a ete comparee a l'energie des vagues de Bragg calculee a partir des donnees brutes d'acceleration fournies par une bouee mouillee dans la zone couverte par les radars. La couverture des CODARs est dependante de la densite d'energie de Bragg, alors que la couverture du WERA y est pratiquement insensible. Un modele de fetch appele GENER a ete force par la vitesse du vent predite par le modele GEM d'Environnement Canada pour estimer la hauteur significative ainsi que la periode modale des vagues. A partir de ces parametres, la densite d'energie des vagues de Bragg a ete evaluee pendant l'hiver a l'aide du spectre theorique de Bretschneider. Ces resultats permettent d'etablir la couverture normale de chaque radar en absence de glace de mer. La concentration de glace de mer, predite par le systeme canadien operationnel de prevision glace-ocean, a ete moyennee sur les differents fetchs du vent selon la direction moyenne journaliere des vagues predites par GENER. Dans un deuxieme temps, la relation entre le ratio des couvertures journalieres obtenues pendant l'hiver 2013 et des couvertures normales de chaque radar d'une part, et la concentration moyenne journaliere de glace de mer d'autre part, a ete etablie. Le ratio des couvertures decroit avec l'augmentation de la concentration de glace de mer pour les deux types

  6. Focus on land reclamation

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1999-04-01

    Various aspects of land reclamation, i.e. returning disturbed land to a state where, at minimum, it is at least capable of supporting the same kinds of land uses as before the disturbance, are discussed. Activities which disturb the land such as surface mining of coal, surface mining and extraction of oil sands, drilling for oil and natural gas, waste disposal sites, including sanitary landfills, clearing timber for forestry, excavating for pipelines and transportation are described, along with land reclamation legislation in Alberta, and indications of future developments in land reclamation research, legislation and regulation. Practical guidelines for individuals are provided on how they might contribute to land reclamation through judicious and informed consumerism, and through practicing good land management, inclusive of reduced use of herbicides, composting of household wastes, and planting of native species or ground cover in place of traditional lawns.

  7. Lunar heat flow: Regional prospective of the Apollo landing sites

    Science.gov (United States)

    Siegler, M. A.; Smrekar, S. E.

    2014-01-01

    reexamine the Apollo Heat Flow Experiment in light of new orbital data. Using three-dimensional thermal conduction models, we examine effects of crustal thickness, density, and radiogenic abundance on measured heat flow values at the Apollo 15 and 17 sites. These models show the importance of regional context on heat flux measurements. We find that measured heat flux can be greatly altered by deep subsurface radiogenic content and crustal density. However, total crustal thickness and the presence of a near-surface radiogenic-rich ejecta provide less leverage, representing only minor (<1.5 mW m-2) perturbations on surface heat flux. Using models of the crust implied by Gravity Recovery and Interior Laboratory results, we found that a roughly 9-13 mW m-2 mantle heat flux best approximate the observed heat flux. This equates to a total mantle heat production of 2.8-4.1 × 1011 W. These heat flow values could imply that the lunar interior is slightly less radiogenic than the Earth's mantle, perhaps implying that a considerable fraction of terrestrial mantle material was incorporated at the time of formation. These results may also imply that heat flux at the crust-mantle boundary beneath the Procellarum potassium, rare earth element, and phosphorus (KREEP) Terrane (PKT) is anomalously elevated compared to the rest of the Moon. These results also suggest that a limited KREEP-rich layer exists beneath the PKT crust. If a subcrustal KREEP-rich layer extends below the Apollo 17 landing site, required mantle heat flux can drop to roughly 7 mW m-2, underlining the need for future heat flux measurements outside of the radiogenic-rich PKT region.

  8. Effect of evaporation and freezing on the salt paragenesis and habitability of brines at the Phoenix landing site

    Science.gov (United States)

    Elsenousy, Amira; Hanley, Jennifer; Chevrier, Vincent F.

    2015-07-01

    The WCL (Wet Chemistry Lab) instrument on board the Phoenix Lander identified the soluble ionic composition of the soil at the landing site. However, few studies have been conducted to understand the parent salts of these soluble ions. Here we studied the possible salt assemblages at the Phoenix landing site using two different thermodynamic models: FREZCHEM and Geochemist's Workbench (GWB). Two precipitation pathways were used: evaporation (T > 0 °C using both FREZCHEM and GWB) and freezing (T chlorate/perchlorate dominated), we calculated the resulting precipitated minerals. The results-through both freezing and evaporation-showed some common minerals that precipitated regardless of the ionic initial concentration. These ubiquitous minerals are magnesium chlorate hexahydrate Mg(ClO3)2ṡ6H2O, potassium perchlorate (KClO4) and gypsum (CaSO4ṡ2H2O). Other minerals evidence specific precipitation pathway. Precipitation of highly hydrated salts such as meridianiite (MgSO4ṡ11H2O) and MgCl2ṡ12H2O indicate freezing pathway, while precipitation of the low hydrated salts (anhydrite, kieserite and epsomite) indicate evaporation. The present hydration states of the precipitated hydrated minerals probably reflect the ongoing thermal processing and recent seasonally varying humidity conditions at the landing site, but these hydration states might not reflect the original depositional conditions. The simulations also showed the absence of Ca-perchlorate in all models, mainly because of the formation of two main salts: KClO4 and gypsum which are major sinks for ClO-4 and Ca2+ respectively. Finally, in consideration to the Martian life, it might survive at the very low temperatures and low water activities of the liquids formed. However, besides the big and widely recognized challenges to life posed by those extreme environmental parameters (especially low water activity), another main challenge for any form of life in such an environment is to maintain contact with the

  9. The land use as a factor in the nuclear power plant site selection; Upotreba zemljista kao faktor u izboru lokacije za nuklearna postrojenja

    Energy Technology Data Exchange (ETDEWEB)

    Marsicanin, B [Institut za Nuklearne Nauke Boris Kidric, Belgrade (Yugoslavia)

    1981-07-01

    In this paper the methodology for the site comparison, taking into account the land use in the vicinity of a potential nuclear site is presented. Due to the established risk values and cost/benefit factors a quantitative comparison could be made. This, also makes possible a approach, common for the most of relevant factors, in order to make the optimization process practical. (author)

  10. Hanford Site Development Plan

    International Nuclear Information System (INIS)

    Hathaway, H.B.; Daly, K.S.; Rinne, C.A.; Seiler, S.W.

    1992-05-01

    The Hanford Site Development Plan (HSDP) provides an overview of land use, infrastructure, and facility requirements to support US Department of Energy (DOE) programs at the Hanford Site. The HSDP's primary purpose is to inform senior managers and interested parties of development activities and issues that require a commitment of resources to support the Hanford Site. The HSDP provides a land use plan for the Hanford Site and presents a picture of what is currently known and anticipated in accordance with DOE Order 4320.1B. Site Development Planning. The HSDP wig be updated annually as future decisions further shape the mission and overall site development process. Further details about Hanford Site development are defined in individual area development plans

  11. Aligning Land Use with Land Potential: The Role of Integrated Agriculture

    Directory of Open Access Journals (Sweden)

    M. A. Liebig

    2017-04-01

    Full Text Available Contemporary agricultural land use is dominated by an emphasis on provisioning services by applying energy-intensive inputs through relatively uniform production systems across variable landscapes. This approach to agricultural land use is not sustainable. Achieving sustainable use of agricultural land should instead focus on the application of innovative management systems that provide multiple ecosystem services on lands with varying inherent qualities. Integrated agricultural systems (IAS represent an alternative approach to prevailing land use, whereby site-adapted enterprises are implemented to enhance synergistic resource transfer among enterprises and sustainable delivery of ecosystem services. Sustainable deployment of IAS on agricultural land involves placing the “right enterprise” at the “right intensity” at the “right time” on the “right location,” with the inherent attributes of location providing guidance for management decisions. There is an urgent need to design IAS that enhance delivery of ecosystem services while ensuring land potential thresholds are not exceeded.

  12. Adaptation aux répercussions de l'élévation du niveau de la mer ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    , la pollution, l'utilisation intensive des terres, la croissance démographique et la dégradation des écosystèmes. Elles sont par ailleurs exposées aux répercussions de la hausse du niveau de la mer et notamment aux inondations. Réduire la ...

  13. Effect of fluence on the lattice site of implanted Er and implantation induced strain in GaN

    CERN Document Server

    Wahl, U; Decoster, S; Vantomme, A; Correi, J G

    2009-01-01

    A GaN thin film was implanted with 5 × 1014 cm−2 of 60 keV stable 166Er, followed by the implantation of 2 × 1013 cm−2 radioactive 167Tm (t1/2 = 9.3 d) and an annealing sequence up to 900 °C. The emission channeling (EC) technique was applied to assess the lattice location of Er following the Tm decay from the conversion electrons emitted by 167mEr, which showed that more than 50% of 167mEr occupies substitutional Ga sites. The results are briefly compared to a 167mEr lattice location experiment in a GaN sample not pre-implanted with 166Er. In addition, high-resolution X-ray diffraction (HRXRD) was used to characterize the perpendicular strain in the high-fluence implanted film. The HRXRD experiments showed that the Er implantation resulted in an increase of the c-axis lattice constant of the GaN film around 0.5–0.7%. The presence of significant disorder within the implanted region was corroborated by the fact that the EC patterns for off-normal directions exhibit a pronounced angular broadening of t...

  14. Land surface cleanup of plutonium at the Nevada Test Site

    International Nuclear Information System (INIS)

    Ebeling, L.L.; Evans, R.B.; Walsh, E.J.

    1991-01-01

    The Nevada Test Site (NTS) covers approximately 3300 km 2 of high desert and is located approximately 100 km northwest of Las Vegas, Nevada. Soil contaminated by plutonium exists on the NTS and surrounding areas from safety tests conducted in the 1950s and 1960s. About 150 curies of contamination have been measured over 1200 hectares of land surface. Most contamination is found in the top 5 cm of soil but may be found deep as 25 cm. The cost of conventional removal and disposal of the full soil volume has been estimated at over $500,000,000. This study is directed toward minimizing the volume of waste which must be further processed and disposed of by precisely controlling soil removal depth. The following soil removal machines were demonstrated at the NTS: (1) a CMI Corporation Model PR-500FL pavement profiler, (2) a CMI Corporation Model Tr-225B trimmer reclaimer, (3) a Caterpillar Model 623 elevating scraper equipped with laser depth control, (4) a Caterpillar Model 14G motor grader equipped with laser depth control, (5) a Caterpillar Model 637 auger scraper, and (6) a XCR Series Guzzler vacuum truck. 5 refs., 5 figs

  15. The utility of a geographic information system in facility/land use-related opportunities and constraints analysis for the Rocky Flats Environmental Technology Site

    International Nuclear Information System (INIS)

    Stewart, J.

    1994-01-01

    Facility/land use-related opportunities and constraints analysis, which is indispensable for the evaluation of potential future uses for a site, is essentially spatial in nature. Spatial analysis is best accomplished using a geographic information system (GIS), as a GIS allows the identification and reporting or mapping of complex relationships among multiple data layers such as geology, soils, vegetation, contamination, and facilities. GIS-based maps and reports are valuable tools for communicating facility/land use-related opportunities and constraints to decision makers. This paper defines the term open-quotes GIS,close quotes, provides an example of how a GIS could be used to conduct opportunities and constraints analysis at the Rocky Flats Environmental Technology Site (RFETS), and summarizes the benefits of using a GIS for this analysis. Because a GIS is often seen as a open-quotes black boxclose quotes shrouded in technical jargon, this paper attempts to describe the concepts and benefits of a GIS in language understandable to decision makers who are not GIS experts but who migth profit from the use of GIS products. The purpose of this paper is to alert DOE decision makers to a valuable source of facility/land use-related information that already exists at many sites and that should not be overlook during the analysis of future use options

  16. Feasibility Study of Economics and Performance of Solar Photovoltaics at the Peru Mill Industrial Park in the City of Deming, New Mexico. A Study Prepared in Partnership with the Environmental Protection Agency for the RE-Powering America's Land Initiative: Siting Renewable Energy on Potentially Contaminated Land and Mine Sites

    Energy Technology Data Exchange (ETDEWEB)

    Kiatreungwattana, K.; Geiger, J.; Healey, V.; Mosey, G.

    2013-04-01

    The U.S. Environmental Protection Agency (EPA), in accordance with the RE-Powering America's Land initiative, selected the Peru Mill Industrial Park site in the City of Deming, New Mexico, for a feasibility study of renewable energy production. The National Renewable Energy Laboratory (NREL) provided technical assistance for this project. The purpose of this report is to assess the site for a possible photovoltaic (PV) system installation and estimate the cost, performance, and site impacts of different PV options. In addition, the report recommends financing options that could assist in the implementation of a PV system at the site.

  17. Contaminated land in Colombia: A critical review of current status and future approach for the management of contaminated sites.

    Science.gov (United States)

    Arias Espana, Victor Andres; Rodriguez Pinilla, Alfonso R; Bardos, Paul; Naidu, Ravi

    2018-03-15

    Environmental contaminants can have negative effects on human health and land, air and water resources. Consequently, there have been significant advances in regulation for protecting the environment in developed countries including the development of remediation frameworks and guidelines. On the other hand, fewer studies have been reported on the risks and health effects of contaminants in developing regions and there is scarce information regarding contaminated land assessment and environmental remediation. Colombia is an important emerging economy and has started to take the first steps towards the development of a framework for the management of contaminated sites and there are opportunities for the country to learn from countries with well-established frameworks such as the United States (US) and the United Kingdom (UK) and for international collaboration with organisations such as CRC for Contamination Assessment and Remediation of the Environment (CARE). We review main pollution issues, current status of contaminated land management in Colombia to identify the gaps in policy and regulation. We also review the UK and US contaminated land policies and regulations to identify the elements of those experiences that could support progress in the country. Finally, we propose recommendations (e.g. risk based approach, soil screening criteria, clean-up funding, liability) for Colombia that could support further development and implementation of a more effective contaminated land management framework. Copyright © 2017 Elsevier B.V. All rights reserved.

  18. Results of Tritium Tracking and Groundwater Monitoring at the Hanford Site 200 Area State-Approved Land Disposal Site-FY 1999

    International Nuclear Information System (INIS)

    Barnett, D.B.

    1999-01-01

    The Hanford Site 200 Area Effluent Treatment Facility (ETF) processes contaminated liquids derived from Hanford Site facilities. The clean water generated by these processes is occasionally enriched in tritium and is discharged to the 200 Area State Approved Land Disposal Site (SALDS). Groundwater monitoring for tritium and other constituents is required by the state-issued permit at 21 wells surrounding the facility. During FY 1999, average tritium activities in most wells declined from average activities in 1998. The exception was deep well 69948-77C, where tritium results were at an all-time high (77,000 pCi/L) as a result of the delayed penetration of effluent deeper into the aquifer. Of the 12 constituents with permit enforcement limits, which are monitored in SALDS proximal wells, all were within limits during FY 1999. Water level measurements in nearby wells indicate that a small hydraulic mound exists around the SALDS facility as a result of discharges. This feature is directing groundwater flow radially outward a short distance before the regional northeasterly flow predominates. Evaluation of this condition indicates that the network is currently adequate for tracking potential effects of the SALDS on the groundwater. Recommendations include the discontinuation of ammonia, benzene, tetrahydrofuran, and acetone from the regular groundwater constituent list; designating background well 299-W8-1 as a tritium-tracking well only, and the use of quadruplicate averages of field pH, instead of a single laboratory measurement, as a permit compliance parameter

  19. Structural features of an exocyclic adduct positioned opposite an abasic site in a DNA duplex

    International Nuclear Information System (INIS)

    Kouchakdjian, M.; Patel, D.J.; Eisenberg, M.; Johnson, F.; Grollman, A.P.

    1991-01-01

    Structural studies have been extended to dual lesions where an exocyclic adduct is positioned opposite an abasic site in the center of a DNA oligomer duplex. NMR and energy minimization studies were performed on the 1,N 2 -propanodeoxyguanosine exocyclic adduct (X) positioned opposite a tetrahydrofuran abasic site (F) with the dual lesions located in the center of the (C1-A2-T3-G4-X5-G6-T7-A8-C9)·(G10-T11-A12-C13-F14-C15-A16-T17-G18) X·F 9-mer duplex. Two-dimensional NMR experiments establish that the X·F 9-mer helix is right-handed with Watson-Crick A·T and G·C base pairing on either side of the lesion site. NOEs are detected from the methylene protons of the exocyclic ring of X5 to the imino protons of G4·C15 and G6·C13 which flank the lesion site, as well as to the H1' and H1 double-prime protons of the cross strand F14 tetrahydrofuran moiety. These NMR results establish that the exocyclic adduct X5 is positioned between flanking G4·C15 and G6·C13 base pairs and directed toward the abasic lesion F14 on the partner strand. These studies establish that the exocyclic ring of the 1,N 2 -propanodeoxyguanosine adduct fits into the cavity generated by the abasic site

  20. Selecting reasonable future land use scenarios

    Energy Technology Data Exchange (ETDEWEB)

    Allred, W.E.; Smith, R.W. [Idaho National Engineering Lab., Idaho Falls, ID (United States)

    1995-12-31

    This paper examines a process to help select the most reasonable future land use scenarios for hazardous waste and/or low-level radioactive waste disposal sites. The process involves evaluating future land use scenarios by applying selected criteria currently used by commercial mortgage companies to determine the feasibility of obtaining a loan for purchasing such land. The basis for the process is that only land use activities for which a loan can be obtained will be considered. To examine the process, a low-level radioactive waste site, the Radioactive Waste Management Complex at the Idaho National Engineering Laboratory, is used as an example. The authors suggest that the process is a very precise, comprehensive, and systematic (common sense) approach for determining reasonable future use of land. Implementing such a process will help enhance the planning, decisionmaking, safe management, and cleanup of present and future disposal facilities.

  1. Selecting reasonable future land use scenarios

    International Nuclear Information System (INIS)

    Allred, W.E.; Smith, R.W.

    1995-01-01

    This paper examines a process to help select the most reasonable future land use scenario for hazardous waste and/or low-level radioactive waste disposal sites. The process involves evaluating future land use scenarios ab applying selected criteria currently used by commercial mortgage companies to determine the feasibility of obtaining a loan for purchasing such land. The basis for the process is that only land use activities for which a loan can be obtained well be considered. To examine the process, a low-level radioactive waste site, the Radioactive Waste Management Complex at the Idaho National Engineering Laboratory, is used as an example. The authors suggest that the process is a very precise, comprehensive, and systematic approach for determining reasonable future use of land. Implementing such a process will help enhance the planning, decisionmaking, safe management, and cleanup of present and future disposal facilities

  2. Selecting reasonable future land use scenarios

    International Nuclear Information System (INIS)

    Allred, W.E.; Smith, R.W.

    1995-01-01

    This paper examines a process to help select the most reasonable future land use scenarios for hazardous waste and/or low-level radioactive waste disposal sites. The process involves evaluating future land use scenarios by applying selected criteria currently used by commercial mortgage companies to determine the feasibility of obtaining a loan for purchasing such land. The basis for the process is that only land use activities for which a loan can be obtained will be considered. To examine the process, a low-level radioactive waste site, the Radioactive Waste Management Complex at the Idaho National Engineering Laboratory, is used as an example. The authors suggest that the process is a very precise, comprehensive, and systematic (common sense) approach for determining reasonable future use of land. Implementing such a process will help enhance the planning, decisionmaking, safe management, and cleanup of present and future disposal facilities

  3. Groundwater Monitoring and Tritium-Tracking Plan for the 200 Area State-Approved Land Disposal Site

    Energy Technology Data Exchange (ETDEWEB)

    Barnett, D. Brent

    2000-08-31

    The 200 Area State-Approved Land Disposal Site (SALDS) is a drainfield which receives treated wastewater, occasionally containing high levels of tritium from treatment of Hanford Site liquid wastes. Only the SALDS proximal wells (699-48-77A, 699-48-77C, and 699-48-77D) have been affected by tritium from the facility thus far; the highest activity observed (2.1E+6 pCi/L) occurred in well 699-48-77D in February 1998. Analytical results of groundwater geochemistry since groundwater monitoring began at the SALDS indicate that all constituents with permit enforcement limits have been below those limits with the exception of one measurement of total dissolved solids (TDS) in 1996. The revised groundwater monitoring sampling and analysis plan eliminates chloroform, acetone, tetrahydrofuran, benzene, and ammonia as constituents. Replicate field measurements will replace laboratory measurements of pH for compliance purposes. A deep companion well to well 699-51-75 will be monitored for tritium deeper in the uppermost aquifer.

  4. Groundwater Monitoring and Tritium-Tracking Plan for the 200 Area State-Approved Land Disposal Site

    Energy Technology Data Exchange (ETDEWEB)

    DB Barnett

    2000-08-31

    The 200 Area State-Approved Land Disposal Site (SALDS) is a drainfield which receives treated wastewater, occasionally containing tritium from treatment of Hanford Site liquid wastes at the 200 Area Effluent Treatment Facility (ETF). Since operation of the SALDS began in December 1995, discharges of tritium have totaled {approx}304 Ci, only half of what was originally predicted for tritium quantity through 1999. Total discharge volumes ({approx}2.7E+8 L) have been commensurate with predicted volumes to date. This document reports the results of all tritium analyses in groundwater as determined from the SALDS tritium-tracking network since the first SALDS wells were installed in 1992 through July 1999, and provides interpretation of these results as they relate to SALDS operation and its effect on groundwater. Hydrologic and geochemical information are synthesized to derive a conceptual model, which is in turn used to arrive at an appropriate approach to continued groundwater monitoring at the facility.

  5. Land Use Management for Solid Waste Programs

    Science.gov (United States)

    Brown, Sanford M., Jr.

    1974-01-01

    The author discusses the problems of solid waste disposal and examines various land use management techniques. These include the land use plan, zoning, regionalization, land utilities, and interim use. Information concerning solid waste processing site zoning and analysis is given. Bibliography included. (MA)

  6. Insularité et démographie dans la mer Intérieure japonaise

    Directory of Open Access Journals (Sweden)

    Philippe PELLETIER

    1992-12-01

    Full Text Available Les îles éloignées (ritô tiennent une place importante dans l’espace japonais. Les îles de la mer Intérieure se dépeuplèrent fortement pendant la Haute Croissance. Un graphique corrélant leur évolution démographique et leur distance par rapport à Honshû et Shikoku nous aide à comprendre que l’éloignement insulaire joua un rôle relatif.

  7. Evidence of mercury trapping in biofilm-EPS and mer operon-based volatilization of inorganic mercury in a marine bacterium Bacillus cereus BW-201B.

    Science.gov (United States)

    Dash, Hirak R; Basu, Subham; Das, Surajit

    2017-04-01

    Biofilm-forming mercury-resistant marine bacterium Bacillus cereus BW-201B has been explored to evident that the bacterial biofilm-EPS (exopolymers) trap inorganic mercury but subsequently release EPS-bound mercury for induction of mer operon-mediated volatilization of inorganic mercury. The isolate was able to tolerate 50 ppm of mercury and forms biofilm in presence of mercury. mer operon-mediated volatilization was confirmed, and -SH was found to be the key functional group of bacterial EPS responsible for mercury binding. Biofilm-EPS-bound mercury was found to be internalized to the bacterial system as confirmed by reversible conformational change of -SH group and increased expression level of merA gene in a timescale experiment. Biofilm-EPS trapped Hg after 24 h of incubation, and by 96 h, the volatilization process reaches to its optimum confirming the internalization of EPS-bound mercury to the bacterial cells. Biofilm disintegration at the same time corroborates the results.

  8. Asymmetric Responses of Primary Productivity to Altered Precipitation Simulated by Land Surface Models across Three Long-term Grassland Sites

    Science.gov (United States)

    Wu, D.; Ciais, P.; Viovy, N.; Knapp, A.; Wilcox, K.; Bahn, M.; Smith, M. D.; Ito, A.; Arneth, A.; Harper, A. B.; Ukkola, A.; Paschalis, A.; Poulter, B.; Peng, C.; Reick, C. H.; Hayes, D. J.; Ricciuto, D. M.; Reinthaler, D.; Chen, G.; Tian, H.; Helene, G.; Zscheischler, J.; Mao, J.; Ingrisch, J.; Nabel, J.; Pongratz, J.; Boysen, L.; Kautz, M.; Schmitt, M.; Krohn, M.; Zeng, N.; Meir, P.; Zhang, Q.; Zhu, Q.; Hasibeder, R.; Vicca, S.; Sippel, S.; Dangal, S. R. S.; Fatichi, S.; Sitch, S.; Shi, X.; Wang, Y.; Luo, Y.; Liu, Y.; Piao, S.

    2017-12-01

    Changes in precipitation variability including the occurrence of extreme events strongly influence plant growth in grasslands. Field measurements of aboveground net primary production (ANPP) in temperate grasslands suggest a positive asymmetric response with wet years resulting in ANPP gains larger than ANPP declines in dry years. Whether land surface models used for historical simulations and future projections of the coupled carbon-water system in grasslands are capable to simulate such non-symmetrical ANPP responses remains an important open research question. In this study, we evaluate the simulated responses of grassland primary productivity to altered precipitation with fourteen land surface models at the three sites of Colorado Shortgrass Steppe (SGS), Konza prairie (KNZ) and Stubai Valley meadow (STU) along a rainfall gradient from dry to wet. Our results suggest that: (i) Gross primary production (GPP), NPP, ANPP and belowground NPP (BNPP) show nonlinear response curves (concave-down) in all the models, but with different curvatures and mean values. In contrast across the sites, primary production increases and then saturates along increasing precipitation with a flattening at the wetter site. (ii) Slopes of spatial relationships between modeled primary production and precipitation are steeper than the temporal slopes (obtained from inter-annual variations). (iii) Asymmetric responses under nominal precipitation range with modeled inter-annual primary production show large uncertainties, and model-ensemble median generally suggests negative asymmetry (greater declines in dry years than increases in wet years) across the three sites. (iv) Primary production at the drier site is predicted to more sensitive to precipitation compared to wetter site, and median sensitivity consistently indicates greater negative impacts of reduced precipitation than positive effects of increased precipitation under extreme conditions. This study implies that most models

  9. MERS-CoV: Middle East respiratory syndrome corona virus: Can radiology be of help? Initial single center experience

    Directory of Open Access Journals (Sweden)

    Ahmed Hamimi

    2016-03-01

    Conclusions: MERS CoV virus may have a specific pattern in chest X-ray and CT developing a single or multiple opacities progressing into a widespread multifocal bilateral patches of ground glass opacities or confluent consolidation resembling organizing pneumonia.

  10. THE INVENTORY OF DATABASES ON THE LAND REGISTRATION FOR THE ECOLOGICAL SITES IN KRAKOW

    Directory of Open Access Journals (Sweden)

    Monika Mika

    2016-12-01

    Full Text Available The paper presents the results of the inventory of databases for the registration of data on the ecological sites. The area of research concerns the administrative borders of the Krakow city. The research materials ware obtained on the basis of analyzes of existing databases recording ecological sites, which constitute the basis of a district database Register of Land and Buildings (EGiB and database District Water Management Board (Regional Board in Krakow city, responsible for the Water Cadastre. The compatibility of the achieved data were compared with the data of the Municipal Information System (MSIP, and the Regional Directorate for Environmental Protection (RDOŚ, and then performed a descriptive specification for all (registered till April 2016, 12 of ecological sites. In the first stage the analysis of the detailed data in the databases of the ecological water cadastre and EGiB was performed then in other databases of descriptive and spatial available for the research area. In the research part of the paper the authors carried out the inventory of the selected object in the studies area and the documentation descriptive and graphical natural curiosities was created. The main aim of this study was to draw attention to natural and tourism potential which is for the big city in an ecological site and obtaining the data to develop the concept of an interactive thematic map natural curiosities, using integrated techniques of surveying GPS and GIS. Such a map will be the next stage of research and is not the subject of this paper.

  11. Titan's surface spectra at the Huygens landing site and Shangri-La

    Science.gov (United States)

    Rannou, P.; Toledo, D.; Lavvas, P.; D'Aversa, E.; Moriconi, M. L.; Adriani, A.; Le Mouélic, S.; Sotin, C.; Brown, R.

    2016-05-01

    Titan is an icy satellite of Saturn with a dense atmosphere and covered by a global photochemical organic haze. Ground based observations and the Huygens descent probe allowed to retrieve the main spectral signature of the water ice (Griffith, C.A. et al. [2003]. Science 300(5619), 628-630; Coustenis, A. et al. [2005]. Icarus 177, 89-105) at the surface, possibly covered by a layer of sedimented organic material (Tomasko, M.G. et al. [2005]. Nature 438(7069), 765-778). However, the spectrum of the surface is not yet understood. In this study, we find that the surface reflectivity at the Huygens Landing Site (HLS) is well modeled by a layer of water ice grains overlaid by a moist layer of weakly compacted photochemical aggregated aerosols. Moist soils have spectra shifted toward short wavelengths relatively to spectra of dry soils. Cassini observations of Shangri-La region from orbit also show a very dark surface with a reflectivity peak shifted toward short wavelengths in respect to the reflectivity peak of bright surfaces, revealing a dichotomy between terrains based to their spectra in visible.

  12. When Information from Public Health Officials is Untrustworthy: The Use of Online News, Interpersonal Networks, and Social Media during the MERS Outbreak in South Korea.

    Science.gov (United States)

    Jang, Kyungeun; Baek, Young Min

    2018-03-20

    Public health officials (PHOs) are responsible for providing trustworthy information during a public health crisis; however, there is little research on how the public behaves when their expectations for such information are violated. Drawing on media dependency theory and source credibility research as our primary theoretical framework, we tested how credibility of information from PHOs is associated with people's reliance on a particular communication channel in the context of the 2015 Middle East Respiratory Syndrome (MERS) outbreak in South Korea. Using nationally representative data (N = 1036) collected during the MERS outbreak, we found that less credible information from PHOs led to more frequent use of online news, interpersonal networks, and social media for acquiring MERS-related information. However, credibility of information from PHOs was not associated with the use of television news or print newspapers. The theoretical and practical implications of our results on communication channels usage are discussed.

  13. The land impact associated with the disposal of radioactive wastes

    International Nuclear Information System (INIS)

    Redmond, I.G.

    1983-01-01

    At present, the only land being utilized for the storage of radioactive wastes in Canada is at the sites of nuclear power generating stations, for high- and low-level wastes, and the land adjacent to uranium mines and mills in the case of tailings and the land in the vicinity of the uranium refinery in Port Hope. Existing storage sites for high- and low-level wastes do not occupy large amounts of land, since the amount of materials is relatively small. Uranium mine tailings, however, need hundreds of hectares of land. In addition to land directly utilized for the storage of the wastes, there may be a need for future buffer zones to separate them from adjoining land uses once a method of permanent disposal is decided. Any land utilized for the disposal of the wastes is likely to be unsuitable for other uses for anywhere from a few years to several thousand years, depending on the waste type occupying the land. Clearly, use of land for the storage and disposal of radioactive wastes may influence it beyond site boundaries and restrict its usage for other purposes for some considerable time to come

  14. 77 FR 49059 - Requested Administrative Waiver of the Coastwise Trade Laws: Vessel CHAT DE MER; Invitation for...

    Science.gov (United States)

    2012-08-15

    ... Administrative Waiver of the Coastwise Trade Laws: Vessel CHAT DE MER; Invitation for Public Comments AGENCY....gov . SUPPLEMENTARY INFORMATION: As described by the applicant the intended service of the vessel CHAT... Francisco Bay. Geographic Region: ``California.'' The complete application is given in DOT docket MARAD-2012...

  15. Spatial and Temporal Land Cover Changes in the Simen Mountains National Park, a World Heritage Site in Northwestern Ethiopia

    Directory of Open Access Journals (Sweden)

    Menale Wondie

    2011-04-01

    Full Text Available The trend of land cover (LC and land cover change (LCC, both in time and space, was investigated at the Simen Mountains National Park (SMNP, a World Heritage Site located in northern Ethiopia, between 1984 and 2003 using Geographical Information System (GIS and remote sensing (RS. The objective of the study was to generate spatially and temporally quantified information on land cover dynamics, providing the basis for policy/decision makers and resource managers to facilitate biodiversity conservation, including wild animals. Two satellite images (Landsat TM of 1984 and Landsat ETM+ of 2003 were acquired and supervised classification was used to categorize LC types. Ground Control Points were obtained in field condition for georeferencing and accuracy assessment. The results showed an increase in the areas of pure forest (Erica species dominated and shrubland but a decrease in the area of agricultural land over the 20 years. The overall accuracy and the Kappa value of classification results were 88 and 85%, respectively. The spatial setting of the LC classes was heterogeneous and resulted from the biophysical nature of SMNP and anthropogenic activities. Further studies are suggested to evaluate the existing LC and LCC in connection with wildlife habitat, conservation and management of SMNP.

  16. Sorghum - An alternative energy crop for marginal lands and reclamation sites

    Science.gov (United States)

    Lukas, Stefan; Theiß, Markus; Jäkel, Kerstin

    2017-04-01

    differences between maize and sorghum were the least pronounced due to the poorer performance of maize under these site conditions. Furthermore, the comparatively lower land-lease rates in these regions allowed for positive equity capital formation also in sorghum crops.

  17. Subsurface moisture regimes and tracer movement under two types of trench-cap designs for shallow land burial sites

    International Nuclear Information System (INIS)

    Perkins, B.A.; Cokal, E.J.

    1986-03-01

    The Los Alamos work has focused on proper design of shallow land burial (SLB) sites in arid and semiarid regions and on applying corrective measures to existing sites. One of the most important design features affecting the probability of movement of radionuclides in SLB sites is the type of trench cap placed over the waste. The cap influences such interdependent parameters as erosion, water infiltration and percolation, and biointrusion. To obtain experimental data for arid and semiarid sites, two different designs of trench caps, one with topsoil underlain with a cobble/gravel biobarrier and one with topsoil underlain with crushed tuff, were compared with respect to (1) seasonal changes in volumetric soil water content, and (2) downward migration of tracers emplaced directly below each type of trench cap. The causes for the large differences in concentrations found in this experiment need to be investigated further. Problems in environmental modeling and monitoring of arid and semiarid SLB sites because of heterogeneities in the soil profiles and their implications for SLB waste management need to be better understood. More work in trench-cap design and its influence on the many pathways available for mobilization is needed

  18. Diversification of the celiac disease α-gliadin complex in wheat: a 33-mer peptide with six overlapping epitopes, evolved following polyploidization.

    Science.gov (United States)

    Ozuna, Carmen V; Iehisa, Julio C M; Giménez, María J; Alvarez, Juan B; Sousa, Carolina; Barro, Francisco

    2015-06-01

    The gluten proteins from wheat, barley and rye are responsible both for celiac disease (CD) and for non-celiac gluten sensitivity, two pathologies affecting up to 6-8% of the human population worldwide. The wheat α-gliadin proteins contain three major CD immunogenic peptides: p31-43, which induces the innate immune response; the 33-mer, formed by six overlapping copies of three highly stimulatory epitopes; and an additional DQ2.5-glia-α3 epitope which partially overlaps with the 33-mer. Next-generation sequencing (NGS) and Sanger sequencing of α-gliadin genes from diploid and polyploid wheat provided six types of α-gliadins (named 1-6) with strong differences in their frequencies in diploid and polyploid wheat, and in the presence and abundance of these CD immunogenic peptides. Immunogenic variants of the p31-43 peptide were found in most of the α-gliadins. Variants of the DQ2.5-glia-α3 epitope were associated with specific types of α-gliadins. Remarkably, only type 1 α-gliadins contained 33-mer epitopes. Moreover, the full immunodominant 33-mer fragment was only present in hexaploid wheat at low abundance, probably as the result of allohexaploidization events from subtype 1.2 α-gliadins found only in Aegilops tauschii, the D-genome donor of hexaploid wheat. Type 3 α-gliadins seem to be the ancestral type as they are found in most of the α-gliadin-expressing Triticeae species. These findings are important for reducing the incidence of CD by the breeding/selection of wheat varieties with low stimulatory capacity of T cells. Moreover, advanced genome-editing techniques (TALENs, CRISPR) will be easier to implement on the small group of α-gliadins containing only immunogenic peptides. © 2015 Society for Experimental Biology and John Wiley & Sons Ltd.

  19. Patterns of Human Respiratory Viruses and Lack of MERS-Coronavirus in Patients with Acute Upper Respiratory Tract Infections in Southwestern Province of Saudi Arabia

    Directory of Open Access Journals (Sweden)

    Ahmed A. Abdulhaq

    2017-01-01

    Full Text Available We undertook enhanced surveillance of those presenting with respiratory symptoms at five healthcare centers by testing all symptomatic outpatients between November 2013 and January 2014 (winter time. Nasal swabs were collected from 182 patients and screened for MERS-CoV as well as other respiratory viruses using RT-PCR and multiplex microarray. A total of 75 (41.2% of these patients had positive viral infection. MERS-CoV was not detected in any of the samples. Human rhinovirus (hRV was the most detected pathogen (40.9% followed by non-MERS-CoV human coronaviruses (19.3%, influenza (Flu viruses (15.9%, and human respiratory syncytial virus (hRSV (13.6%. Viruses differed markedly depending on age in which hRV, Flu A, and hCoV-OC43 were more prevalent in adults and RSV, hCoV-HKU1, and hCoV-NL63 were mostly restricted to children under the age of 15. Moreover, coinfection was not uncommon in this study, in which 17.3% of the infected patients had dual infections due to several combinations of viruses. Dual infections decreased with age and completely disappeared in people older than 45 years. Our study confirms that MERS-CoV is not common in the southwestern region of Saudi Arabia and shows high diversity and prevalence of other common respiratory viruses. This study also highlights the importance and contribution of enhanced surveillance systems for better infection control.

  20. Selection of the landing site in Isidis Planitia of Mars probe Beagle 2

    Science.gov (United States)

    Bridges, J. C.; Seabrook, A. M.; Rothery, D. A.; Kim, J. R.; Pillinger, C. T.; Sims, M. R.; Golombek, M. P.; Duxbury, T.; Head, J. W.; Haldemann, A. F. C.; Mitchell, K. L.; Muller, J.-P.; Lewis, S. R.; Moncrieff, C.; Wright, I. P.; Grady, M. M.; Morley, J. G.

    2003-01-01

    This paper describes selection and characterization of the landing site for the Mars 2004 Beagle 2 mission. The site is within Isidis Planitia between 10°-12°N, 266°-274°W, centered at 11.6°N, 269.5°W. This is at low elevation (-3600 to -3900 m MOLA), is flat (MOLA RMS slope = 0.57°), radar data suggest a smoother surface at decimeter to meter scales than the Pathfinder site and it has a moderate rock abundance (2-17%, mean 11%). In addition to this, Isidis shows evidence for concentration and remobilization of volatiles. In particular, the basin contains conical landforms. We favor models involving the formation of tuff cones during magma-ice interaction. Structures identified as dykes in MOC images may be remnants of magma conduits. The pattern of bulk thermal inertia in Isidis (higher values of 500 Jm-2s-0.5K-1 around the SW-S-E margin decreasing toward the center and north) suggests that an influx of sediment spread from the Noachian areas around the southern half of the basin over the basin floor. The coarse, higher thermal inertia material was deposited closest to the sediment source. The variable state of erosion of the tuff cones suggests that they formed intermittently over a long period of time during Amazonian and possibly Hesperian epochs. Geologically recent resurfacing of Isidis has also occurred by aeolian processes, and this is shown by a deficit in impact craters duricrust.

  1. Carbon-cycle effects of differences in soil moisture and soil extracellular enzyme activity at sites representing different land-use histories in high-elevation Ecuadorian páramo landscapes

    Science.gov (United States)

    McKnight, J.; Harden, C. P.; Schaeffer, S. M.

    2016-12-01

    Ecuadorian páramo grasslands are important regional soil carbon sinks. In the páramo of the Mazar Wildlife Reserve, differences in soil carbon content among different types of land use may reflect changes in soil carbon-acquisition related microbial enzyme activity after land cover and soil moisture are altered; however, this hypothesis has not been tested explicitly for Ecuadorian páramos. This study used a fluorescence enzyme assay to assess the activities of four different extracellular enzymes representing carbon acquisition: α-glucosidase, β-glucosidase, β-D-cellulobiohydrolase, and β-xylosidase in Andean páramo soils. Acquisition activities were also measured for nitrogen (N-acetyl-β-glucosidase and leucine aminopeptidase) and phosphorus (phosphatase) to assess stoichiometric differences between land-uses, which can affect soil microbial activity related to carbon acquisition. Soils were analyzed from four land uses: native forest, grass páramo, recently burned grass páramo, and non-native pine plantation. Carbon acquisition activity was highest at the pine site (678 nmol h-1 g-1) and lowest at the recently burned páramo site (252 nmol h-1 g-1), indicating the lowest and highest available soil carbon, respectively. Carbon-acquisition EE activity was significantly higher at the grass páramo site (595 nmol h-1 g-1) than at the recently burned páramo and native forest sites. At the grass páramo site, a history of burning as a management strategy and high carbon-acquisition EE activity could indicate the presence of pyrogenic soil organic matter, which is more resistant to microbial decomposition. Soils at the native forest and both grassland sites were phosphorus limited, and soil at the pine site had higher nitrogen-acquisition activity, indicative of a shift to nitrogen-limited soil stoichiometric conditions. To our knowledge these are the first data reported for soil extracellular enzyme activities for Ecuadorian páramos.

  2. Phthalate esters contamination in soil and plants on agricultural land near an electronic waste recycling site.

    Science.gov (United States)

    Ma, Ting Ting; Christie, Peter; Luo, Yong Ming; Teng, Ying

    2013-08-01

    The accumulation of phthalic acid esters (PAEs) in soil and plants in agricultural land near an electronic waste recycling site in east China has become a great threat to the neighboring environmental quality and human health. Soil and plant samples collected from land under different utilization, including fallow plots, vegetable plots, plots with alfalfa (Medicago sativa L.) as green manure, fallow plots under long-term flooding and fallow plots under alternating wet and dry periods, together with plant samples from relative plots were analyzed for six PAE compounds nominated as prior pollutants by USEPA. In the determined samples, the concentrations of six target PAE pollutants ranged from 0.31-2.39 mg/kg in soil to 1.81-5.77 mg/kg in various plants (dry weight/DW), and their bioconcentration factors (BCFs) ranged from 5.8 to 17.9. Health risk assessments were conducted on target PAEs, known as typical environmental estrogen analogs, based on their accumulation in the edible parts of vegetables. Preliminary risk assessment to human health from soil and daily vegetable intake indicated that DEHP may present a high-exposure risk on all ages of the population in the area by soil ingestion or vegetable consumption. The potential damage that the target PAE compounds may pose to human health should be taken into account in further comprehensive risk assessments in e-waste recycling sites areas. Moreover, alfalfa removed substantial amounts of PAEs from the soil, and its use can be considered a good strategy for in situ remediation of PAEs.

  3. POLITIK HUKUM PEMBENTUKAN PERATURAN DAERAH NOMOR 5 TAHUN 2006 TENTANG INVESTASI INFRASTRUKTUR JALAN DAN LANDING SITE EKS JALAN PERTAMINA OLEH PEMERINTAH KABUPATEN BARITO TIMUR

    Directory of Open Access Journals (Sweden)

    Ruslan Abdul Rasyid

    2015-06-01

    Full Text Available Abstract Establishment of Regional Regulation No. 5 of 2006 on Road Infrastructure Investment And Landing Site Ex Pertamina Way East Barito Regency Government, influenced by the politics of law by forming the law (executive and legislative. Political implications of the law Regulation No. 5 of 2006 on Road Infrastructure Investment And Landing Site Ex Pertamina Way East Barito District Government towards wealth management area in East Barito Regency causing uncertainty about the asset management area in the district. East Barito. This local regulation, only juridical validity alone, but compliance enforced by the use of apparatus of state power is not the law anymore, but just a mere statement of power, so that the validity of the factual and moral force which can not result in the area of wealth management is not optimal and lead to investment climate minimal impact on local revenue Alone (PADS East Barito regency became maximal. Key words: local regulations, legal policy, legal implications   Abstrak Pembentukan Peraturan Daerah nomor 5 tahun 2006 tentang Investasi  Infrastruktur Jalan Dan Landing Site Eks Jalan Pertamina oleh Pemerintah Kabupaten Barito Timur, dipengaruhi oleh adanya politik hukum oleh  para pembentuk Perda tersebut (eksekutif dan legislatif. Implikasi politik hukum Peraturan Daerah Nomor 5 Tahun 2006 Tentang Investasi Infrastruktur Jalan Dan Landing Site Eks Jalan Pertamina oleh Pemerintah Kabupaten Barito Timur terhadap  pengelolaan kekayaan daerah di Kabupaten Barito Timur menyebabkan ketidakjelasan tentang pengelolaan asset daerah yang ada di Kab. Barito Timur. Peraturan daerah ini, hanya memiliki keberlakuan yuridikal saja, namun kepatuhannya dipaksakan dengan penggunaan aparat kekuasaan negara adalah bukan hukum lagi, melainkan hanya pernyataan kekuasaan belaka, sehingga secara keberlakuan faktual dan moral tidak bisa berlaku yang mengakibatkan pengelolaan kekayaan daerah tidak maksimal dan menyebabkan iklim

  4. NMR studies of the exocyclic 1,N6-ethenodeoxyadenosine adduct (εdA) opposite thymidine in a DNA duplex. Nonplanar alignment of εdA(anti) and dT(anti) at the lesion site

    International Nuclear Information System (INIS)

    Kouchakdjian, M.; Patel, D.J.; Eisenberg, M.; Yarema, K.; Basu, A.; Essigmann, J.

    1991-01-01

    Two-dimensional proton NMR studies are reported on the complementary d(C-A-T-G-T-G-T-A-C)·d(G-T-A-C-εA-C-A-T-G) nonanucleotide duplex (designated εdA·dT 9-mer duplex) containing 1,N 6 -ethenodeoxyadenosine (εdA), a carcinogen-DNA adduct, positioned opposite thymidine in the center of the helix. The authors NMR studies have focused on the conformation of the εdA·dT 9-mer duplex at neutral pH with emphasis on defining the alignment at the dT5·εdA14 lesion site. The through-space NOE distance connectivities establish that both dT5 and εdA14 adopt anti glycosidic torsion angles, are directed into the interior of the helix, and stack with flanking Watson-Crick dG4·dC15 and dG6·dC13 pairs. Furthermore, the d(G4-T5-G6)·d(C13-εA14-C15) trinucleotide segment centered about the dT5·εdA14 lesion site adopts a right-handed helical conformation in solution. Energy minimization computations were undertaken starting from six different alignments of dT5(anti) and εdA14(anti) at the lesion site and were guided by distance constraints defined by lower and upper bounds estimated from NOESY data sets on the εdA·dT 9-mer duplex. The NMR data are consistent with a nonplanar alignment of εdA14(anti) and dT5(anti) with dT5 displaced toward the flanking dG4·dC15 base pair within the d(G4-T5-G6)·d(C13-εA14-C15) segment of the εdA·dT 9-mer duplex

  5. Field demonstration of improved shallow land burial practices for low-level radioactive solid wastes: preliminary site characterization and progress report

    International Nuclear Information System (INIS)

    Vaughan, N.D.; Haase, C.S.; Huff, D.D.; Lee, S.Y.; Walls, E.C.

    1982-12-01

    A 5-year field demonstration (ETF) of improved shallow land burial practices for low-level radioactive solid wastes in a humid environment evaluates the use of a trench liner and grout as alternate trench treatments for improving shallow land burial site performance in the humid East. The ETF is located within the Copper Creek thrust block of the Valley and Ridge Province of east Tennessee and is underlain by strata of the Middle to Late Cambrian Conasauga Group. The Maryville Limestone formation, which is composed of ribbon-bedded and interclastic limestones and dark grey shales and mudstones, comprises the bedrock immediately beneath the site. The bedrock and residuum structure are characterized by anticlinal folds with numerous joints and fractures, some of which are filled with calcite. Seismic and electrical resistivity geophysical methods were useful in characterizing the thickness of residuum and presence of structural features. Soils are illitic and range from podzolic to lithosols to alluvial in the vicinity of the ETF, but the original soil solum was removed in 1975 when the mixed hardwood forest was cleared and the site was planted in grasses. The remaining residuum consists of acidic soil aggregate and extensively weathered siltstone and sandstone which exhibit the original rock structure. Mean annual precipitation at the site is 1500 mm, although during the initial study period (10-1-80 to 9-30-81) the annual total was 939 mm. Runoff was estimated to be about 50% of the precipitation total, based on observations at two Parshall flumes installed at the site. Storm runoff is quite responsive to rainfall, and the lag time between peak rainfall and runoff is less than 15 min during winter storms. Tracer studies of the ground-water system, suggest that ground-water flow has two distinct components, one associated with fracture flow and the other with intergranular flow

  6. Lunar Reconnaissance Orbiter Data Enable Science and Terrain Analysis of Potential Landing Sites in South Pole-Aitken Basin

    Science.gov (United States)

    Jolliff, B. L.

    2017-12-01

    Exploring the South Pole-Aitken basin (SPA), one of the key unsampled geologic terranes on the Moon, is a high priority for Solar System science. As the largest and oldest recognizable impact basin on the Moon, it anchors the heavy bombardment chronology. It is thus a key target for sample return to better understand the impact flux in the Solar System between formation of the Moon and 3.9 Ga when Imbrium, one of the last of the great lunar impact basins, formed. Exploration of SPA has implications for understanding early habitable environments on the terrestrial planets. Global mineralogical and compositional data exist from the Clementine UV-VIS camera, the Lunar Prospector Gamma Ray Spectrometer, the Moon Mineralogy Mapper (M3) on Chandrayaan-1, the Chang'E-1 Imaging Interferometer, the spectral suite on SELENE, and the Lunar Reconnaissance Orbiter Cameras (LROC) Wide Angle Camera (WAC) and Diviner thermal radiometer. Integration of data sets enables synergistic assessment of geology and distribution of units across multiple spatial scales. Mineralogical assessment using hyperspectral data indicates spatial relationships with mineralogical signatures, e.g., central peaks of complex craters, consistent with inferred SPA basin structure and melt differentiation (Moriarty & Pieters, 2015, JGR-P 118). Delineation of mare, cryptomare, and nonmare surfaces is key to interpreting compositional mixing in the formation of SPA regolith to interpret remotely sensed data, and for scientific assessment of landing sites. LROC Narrow Angle Camera (NAC) images show the location and distribution of >0.5 m boulders and fresh craters that constitute the main threats to automated landers and thus provide critical information for landing site assessment and planning. NAC images suitable for geometric stereo derivation and digital terrain models so derived, controlled with Lunar Orbiter Laser Altimeter (LOLA) data, and oblique NAC images made with large slews of the spacecraft, are

  7. Comparative approaches to siting low-level radioactive waste disposal facilities

    International Nuclear Information System (INIS)

    Newberry, W.F.

    1994-07-01

    This report describes activities in nine States to select site locations for new disposal facilities for low-level radioactive waste. These nine States have completed processes leading to identification of specific site locations for onsite investigations. For each State, the status, legal and regulatory framework, site criteria, and site selection process are described. In most cases, States and compact regions decided to assign responsibility for site selection to agencies of government and to use top-down mapping methods for site selection. The report discusses quantitative and qualitative techniques used in applying top-down screenings, various approaches for delineating units of land for comparison, issues involved in excluding land from further consideration, and different positions taken by the siting organizations in considering public acceptance, land use, and land availability as factors in site selection

  8. Land Conversion, Social Impacts, and Legal Remedies ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Land Conversion, Social Impacts, and Legal Remedies: Understanding the Role of Community Paralegals in Addressing Impacts of Land Use Change in Asia. This project addresses the ... Pays d' institution. United States. Site internet.

  9. Assessing the recreational demand for agricultural land in Finland

    Directory of Open Access Journals (Sweden)

    E. POUTA

    2008-12-01

    Full Text Available It is widely assumed that the scenic attractiveness and other public good aspects of agricultural land can be utilized as a source of livelihood in rural areas in the form of recreation and tourism. In this study we use two approaches to consider whether agricultural landscapes are preferred as a destination for recreation (day trips and rural tourism (overnight trips. We first analyse the choice of recreation site type based on a model that aggregates sites using the presence of agricultural land as an aggregation variable. Population survey data on recreation trips reveal an association between the respondent’s living environment, recreational activities and visit characteristics and the probability of choosing a destination with agricultural land. Second, we also estimate the demand functions for trips to agricultural sites and other destination types to consider whether the presence of agricultural land, as opposed to other land use categories, increases the number of trips and the benefits of recreation. The results suggest that agricultural landscapes are inferior to alternative site types in terms of per-trip benefits. However, agricultural landscapes are associated with high annual benefits because of the high rate of visitation.;

  10. 32 CFR 644.22 - Site selection.

    Science.gov (United States)

    2010-07-01

    ... and site boards should be informed of any available lands, including marginal lands in civil works... HANDBOOK Project Planning Military (army and Air Force) and Other Federal Agencies § 644.22 Site selection... Engineer to prepare a Real Estate Planning Report or Real Estate Summary, making reference to the prior...

  11. Computer aided site management. Site use management by digital mapping

    International Nuclear Information System (INIS)

    Chupin, J.C.

    1990-01-01

    The logistics program developed for assisting the Hague site management is presented. A digital site mapping representation and geographical data bases are used. The digital site map and its integration into a data base are described. The program can be applied to urban and rural land management aid. Technical administrative and economic evaluations of the program are summarized [fr

  12. Dust devil track survey at Elysium Planitia, Mars: Implications for the InSight landing sites

    Science.gov (United States)

    Reiss, Dennis; Lorenz, Ralph D.

    2016-03-01

    The InSight (Interior Exploration using Seismic Investigations, Geodesy and Heat Transport) robotic lander is scheduled to land in Elysium Planitia on Mars in September 2016. InSight will perform the first comprehensive surface-based geophysical investigation including seismic measurements. Knowledge about encounter rates of dust devils with the InSight lander are important for two main reasons: (1) dust devils will affect the scientific measurements, i.e., wind-induced seismic noise, and (2) the power-supply of the InSight lander and instruments is provided by solar arrays and previous landers and rovers on Mars were affected by a steady decline in electrical power output due to atmospheric dust deposition on the solar panels. Long term science operations were only made possible by dust clearing events of the solar arrays caused by wind gusts and dust devils. In this study we analyzed dust devil tracks (DDTs) at the final InSight landing site region in Elysium Planitia. Formation of DDTs is caused by the removal of a layer of dust by passing dust devils, hence in principle the same process as clearing of dust from solar panels. We mapped the number, size (width and length), and orientation of DDTs in repeat observations using High Resolution Imaging Science Experiment (HiRISE) images covering the exact same surface area acquired within a relatively short time span (solar panel clearing recurrence interval estimate of ∼11 Mars years using the mean annual DDT formation rate, and the mean DDT width and length from all measured DDTs. Due to several uncertainties this solar panel clearing recurrence interval for the InSight landing should be seen as an upper limit estimate.

  13. EPA RE-Powering Mapper: Alternative Energy Potential at Cleanup Sites

    Science.gov (United States)

    The U.S. Environmental Protection Agency (EPA) Office of Land and Emergency Management??s (OLEM) Office of Communications, Partnerships and Analysis (OCPA) initiated the RE-Powering America's Land Initiative to demonstrate the enormous potential that contaminated lands, landfills, and mine sites provide for developing renewable energy in the United States. EPA developed national level site screening criteria in partnership with the U.S. Department of Energy (DOE) National Renewable Energy Laboratory (NREL) for wind, solar, biomass, and geothermal facilities. While the screening criteria demonstrate the potential to reuse contaminated land for renewable energy facilities, the criteria and data are neither designed to identify the best sites for developing renewable energy nor all-inclusive. Therefore, more detailed, site-specific analysis is necessary to identify or prioritize the best sites for developing renewable energy facilities based on the technical and economic potential. Please note that these sites were only pre-screened for renewable energy potential. The sites were not evaluated for land use constraints or current on the ground conditions. Additional research and site-specific analysis are needed to verify viability for renewable energy potential at a given site.

  14. Norfolk and environs: A land use perspective

    Science.gov (United States)

    Alexander, Robert H.; Buzzanell, Peter J.; Fitzpatrick, Katherine A.; Lins, Harry F.; McGinty, Herbert K.

    1975-01-01

    The Norfolk-Portsmouth Standard Metropolitan Statistical Area (SMSA) in southeastern Virginia was the site of intensive testing of a number of land resources assessment methods, built around the availability of remotely sensed data from the Earth Resources Technology Satellite (ERTS-I), later renamed LANDSAT I. The Norfolk tests were part of a larger experiment known as the Central Atlantic Regional Ecological Test Site (CARETS), designed to test the extent to which LANDSAT and associated high-altitude aircraft data could be used as cost-effective inputs to a regional land use information system. The Norfolk SMSA contains a variety of land uses typical of the urbanized eastern seaboard, along with typical associated problems: rapid urbanization; heavy recreational, commercial, and residential demands on fragile beaches and coastal marsh environments; industrial, transportation, and governmental land and water uses impacting on residential and agricultural areas; drainage and land stability difficulties affecting construction and other uses; and increasing difficulties in maintaining satisfactory air and water quality.

  15. The Mars Science Laboratory Mission: Early Results from Gale Crater Landing Site

    Science.gov (United States)

    Flatow, I.; Grotzinger, J. P.; Blake, D.; Crisp, J. A.; Edgett, K. S.; Gellert, R.; Gomez-Elvira, J.; Hassler, D. M.; Mahaffy, P. R.; Malin, M. C.; Meyer, M. A.; Mitrofanov, I.; Vasavada, A. R.; Wiens, R. C.

    2012-12-01

    The Mars Science Laboratory rover, Curiosity, landed at Gale Crater on August 5th (PDT) and initiated an investigation of modern and ancient environments. The 155-km diameter Gale Crater was chosen as Curiosity's field site based on several attributes: the interior Mount Sharp preserves a succession of flat-lying strata extending almost 5 km above the elevation of the landing site; the lower few hundred meters of the mound show a progression with relative age from clay-bearing to sulfate-bearing strata, separated by an unconformity from overlying likely anhydrous strata; the landing ellipse is characterized by a mixture of alluvial fan and high thermal inertia/high albedo stratified deposits; and a number of stratigraphically/geomorphically distinct fluvial features. Gale's regional context and strong evidence for a progression through multiple potentially habitable environments, represented by a stratigraphic record of extraordinary extent, ensure preservation of a rich record of the environmental history of early Mars. Curiosity has an expected lifetime of at least one Mars year (~23 months), and drive capability of at least 20 km. The MSL science payload was specifically assembled to assess habitability and includes a gas chromatograph-mass spectrometer and gas analyzer that will search for organic carbon in rocks, regolith fines, and the atmosphere (SAM); an x-ray diffractometer that will determine mineralogical diversity (CheMin); focusable cameras that can image landscapes and rock/regolith textures in natural color (MAHLI, Mastcam); an alpha-particle x-ray spectrometer for in situ determination of rock and soil chemistry (APXS); a laser-induced breakdown spectrometer to remotely sense the chemical composition of rocks and minerals (ChemCam); an active/passive neutron spectrometer designed to search for water in rocks/regolith (DAN); a weather station to measure modern-day environmental variables (REMS); and a sensor designed for continuous monitoring of

  16. Mozambique - Urban Land Regularization

    Data.gov (United States)

    Millennium Challenge Corporation — This baseline survey was developed for the impact evaluation of activities related to 'improving land access in urban hotspot areas.' The site-specific interventions...

  17. Assessing urban vacant land ecosystem services: Urban vacant land as green infrastructure in the City of Roanoke, Virginia

    Science.gov (United States)

    Gunwoo Kim; Patrick A. Miller; David J. Nowak

    2015-01-01

    The research reported here quantifies the ecosystem services and values of vacant land using the City of Roanoke, Virginia as a study site. Aerial photo interpretation with ground-truthing was used to identify and catalog vacant parcels of land within the city limits and the results mapped using the i-Tree Canopy and i-Tree Eco models to define land cover classes and...

  18. Molecular identification of Lodoicea maldivica (coco de mer seeds

    Directory of Open Access Journals (Sweden)

    Mok Chuen-shing

    2011-09-01

    Full Text Available Abstract Background The edible endosperm of Lodoicea maldivica with the common name of coco de mer is used in Chinese medicine for treating cough. Native to Seychelles, Lodoicea maldivica seeds have commanded high prices for centuries due to its scarcity. This study aims to develop a molecular identification method for the authentication of Lodoicea maldivica seeds. Methods DNA was extracted from the sample. Two polymerase chain reaction (PCR systems were developed to amplify a region of the chloroplast DNA and the nuclear phosphoribulokinase (PRK region specific to Lodoicea maldivica respectively. DNA sequence of a sample was determined and compared with that of the Lodoicea maldivica reference material. Results The PRK gene of Lodoicea maldivica was successfully amplified and sequenced for identification. Conclusion A new molecular method for the identification of Lodoicea maldivica seeds in fresh, frozen or dried forms was developed.

  19. Hanford Federal Facility state of Washington leased land

    Energy Technology Data Exchange (ETDEWEB)

    1993-11-01

    This report was prepared to provide information concerning past solid and hazardous waste management practices for all leased land at the US DOE Hanford Reservation. This report contains sections including land description; land usage; ground water, air and soil monitoring data; and land uses after 1963. Numerous appendices are included which provide documentation of lease agreements and amendments, environmental assessments, and site surveys.

  20. Hanford Federal Facility state of Washington leased land

    International Nuclear Information System (INIS)

    1993-11-01

    This report was prepared to provide information concerning past solid and hazardous waste management practices for all leased land at the US DOE Hanford Reservation. This report contains sections including land description; land usage; ground water, air and soil monitoring data; and land uses after 1963. Numerous appendices are included which provide documentation of lease agreements and amendments, environmental assessments, and site surveys