Sample records for malaccensis prostigmata cheyletidae

  1. Egg morphology of the predatory mite, Cheyletus malaccensis (Acarina: Cheyletidae)

    Kučerová, Z.; Hromádková, Jiřina


    Roč. 32, č. 1 (2009), s. 35-40 ISSN 0171-8177 Institutional research plan: CEZ:AV0Z40500505 Keywords : Cheyletus malaccensis Oudemans 1903 * biocontrol * eggshell surface structure Subject RIV: GF - Plant Pathology, Vermin, Weed, Plant Protection Impact factor: 0.618, year: 2009

  2. Propagation of Aquilaria malaccensis seedlings through tissue culture techniques

    Salahbiah Abdul Majid; Zaiton Ahmad; Mohd Rafaie Abdul Salam; Nurhayati Irwan; Affrida Abu Hassan; Rusli Ibrahim


    Aquilaria malaccensis or karas is the principal source of gaharu resin, which is used in many cultures for incense, perfumes and traditional medicines. The species is mainly propagated conventionally through seeds, cuttings and graftings. Propagation by seeds is usually a reliable method for other forest species, but for karas, this technique is inadequate to meet the current demand of seedling supplies. This is principally due to its low seed viability, low germination rate, delayed rooting of seedlings, long life-cycle and rare seed production. Tissue culture has several advantages over conventional propagation, especially for obtaining large number of uniform and high-yielding plantlets or clones. This paper presents the current progress on mass-propagation of Aquilaria malaccensis seedlings through tissue culture technique at Nuclear Malaysia. (author)

  3. Manifestações dermatológicas desencadeadas por ácaros da família Cheyletidae: relato de caso

    Ezequiel,Oscarina da Silva; Gazêta,Gilberto Salles; Freire,Nicolau Maués da Serra


    Ácaros da família Cheyletidae são de grande importância na veterinária, por estarem associados com parasitismo em aves e mamíferos. Permanecem, contudo, pouco estudados como fatores etiológicos em dermatites humanas, apesar de serem encontradas referências a esse respeito desde o início do século 20. O objetivo dos autores foi o de analisar, em paciente de seis meses de idade, um caso clínico de dermatite por ácaros da família Cheyletidae. O achado de três espécies dessa família no ecossistem...

  4. FTIR Analysis of Phenolic Compound as Pancreatic Lipase Inhibitor from Inoculated Aquilaria Malaccensis

    Nur Fahana Jamahseri; Miradatul Najwa Mohd Rodhi; Nur Hidayah Zulkarnain; Nursyuhada Che Husain; Ahmad Fakhri Syahmi Masruddin


    This research aimed to discover the potential of inoculated Aquilaria malaccensis extract as a new and safe lipase inhibitor. The phenolic compounds in this plant are expected to promote inhibitory activity towards pancreatic lipase enzyme. Inoculated Aquilaria malaccensis was selected for this research, wherein the parts of this species (bark and leaves) were extracted via hydro distillation process. The extracts of this plant which are hydrosol, oil, and leaves were analyzed for phyto chemical compound via Fourier Transform Infrared Spectroscopy (FTIR). FTIR analysis of the extracts of inoculated Aquilaria malccensis revealed the presence of hydroxyl functional group in both leaves and hydrosol extracts but absence in oil. This validate the presence of phenolic compound in hydrosol and leaves extract. Therefore, the leaves and hydrosol extracts have potential as an anti-obesity agent by inhibiting pancreatic lipase. (author)

  5. Phytosociology of aquilaria malaccensis lamk. and its communities from a tropical forest reserve in peninsular malaysia

    Razak, S. A.; Haron, N. W.


    A phytosociological study on the floristic and vegetation communities of Aquilaria malaccensis was carried out in Sungai Udang Forest Reserve, Malacca, Malaysia. The main objectives of this study were to identify, characterize and classify the Aquilaria malaccensis communities which were naturally distributed in the Sungai Udang Forest Reserve. A total of 25 plots (40 m x 20 m) in size were constructed according to the line transect method. The vegetation sampling and data analysis were done. A total of 80 species belonging to 79 genera and 40 families were found from all the 25 plots in Sungai Udang Forest Reserve. The most abundant family was the Euphorbiaceae with 220 individual trees, followed by Myrtaceae and Anacardiaceae representing 212 and 197 individual trees, respectively. A community which was Aquilaria malaccensis Artocarpus rigidus community with two new sub-community known as Palaquium gutta sub-community and Barringtonia racemosa sub-community were identified on the basis of statistical and phytosociological analyses. These community and sub-community also showed preference on different geographical and environmental factors such as soils and local relief. This study is useful in providing more information on the growth response of the mixed dipterocarp forest in the development of proper forest management. (author)

  6. Establishment of Aquilaria malaccensis Callus, cell suspension and adventitious root systems

    Norazlina Noordin; Rusli Ibrahim


    Aquilaria malaccensis is a tropical forest tree from the family Thymelaeaceae, an endangered forest species and was listed in CITES since 1995. Locally known as Pokok Karas, this tree produces agar wood or gaharu, a highly valuable, resinous and fragrant forest product. Karas has been highly recognized for its vast medicinal values and gaharu has been widely use for perfumery, incense and religious purposes. The phyto chemical studies of agar wood showed that Sesqui terpenoid and Phenyl ethy chromone derivatives are the principal compounds that have anti allergic and anti microbe activities. Cell and organ culture systems provide large scale production of biomass and offers feasibilities for the production of secondary metabolites. This paper describes the work done for establishing reproducible systems for callus initiation and production of cell suspension cultures as well as production of adventitious roots that will later be amenable for the production of secondary metabolites of A. malaccensis. Hence, further manipulation with Methyl Jasmonate, a chemical elicitor could be done to induce secondary metabolites using callus, cell suspension and adventitious roots systems. (author)

  7. Crucial optimization steps in getting premier quality of Aquilaria malaccensis genomic DNA for molecular activities

    Muhammad Hanif Azhari; Azhar Mohamad


    Gaharu resin is derived from Aquilaria sp. or Agar wood tree in a tropical ecosystem. In Malaysia the Aquilaria species especially A. malaccensis in danger of extinction in the wild due to illegal logging as its resin is highly used for the production of greatly valued incense throughout Asia. A significant tool in fingerprinting the species is through molecular activities of Polymerase Chain Reaction (PCR) application on which requires total genomic DNA as a starting material. This paper, described optimizations of both fresh and dried samples derived from A. malaccensis for genomic DNA. Three main parameters for the optimization were temperature (60, 65, and 70 degree Celsius), incubation period (30, 60, 90 minutes) and concentration of CTAB (1 %, 3 %, 5 %). The experimental design in these work resulted a total of 46 combinations of the parameters in which 0.5 g samples was used in each combination. Nano-drop spectrometer was used in detecting the quantitative genomic DNA at ng/ μl. In fresh samples, incubation temperatures at 65 degree Celsius for 60 minutes in 3 % were yielded 723.2 ng/ μl genomic DNA. Whereas, for dried samples, incubation temperature at 70 degree Celsius for 90 minutes in 5 % CTAB were yielded 70.2 ng/ μl of genomic DNA. Spectrometer reading at OD280/ 260 was 1.9 for both type of samples. The isolated genomic DNA is useful for the molecular activities to identify specific plants between the same species or among the Aquilaria species. (author)

  8. Ecological Features of Cultivated Stands of Aquilaria malaccensis Lam. (Thymelaeaceae, a Vulnerable Tropical Tree Species in Assamese Homegardens

    P. Saikia


    Full Text Available Research was conducted in twenty-seven selected villages located in Jorhat and Golaghat districts of upper Assam, northeast India, for population estimation, quantitative ecological analysis, and evaluation of Aquilaria malaccensis (Thymelaeaceae. Vegetation sampling was done by quadrat method and A. malaccensis is the most dominant tree species in all twenty-seven different study sites of upper Assam contributing 10–54% of the total tree density with a mean of 34%±2. Density of the species varied from 6,236 individuals ha−1 to 429 individuals ha−1 with a mean of 1,609 individuals ha-1±217, whereas frequency of occurrence is very high ranging from 93% to 100% with a mean of 98%±0.53 in different study sites. Distribution of A. malaccensis is found contagious in all twenty-six study sites on the basis of abundance to frequency ratio except in KBG, Golaghat, where its distribution is random with 0.04 abundance to frequency ratio. The widespread cultivation of A. malaccensis in upper Assam, northeast India, offers a potential ex situ reservoir for the future conservation and management of this threatened tree.

  9. Evaluation of antioxidant, immunomodulatory, and cytotoxic action of fractions from Eugenia uniflora L. and Eugenia malaccensis L.: correlation with polyphenol and flavanoid content.

    Figueirôa, Evellyne de Oliveira; Nascimento da Silva, Luís Cláudio; de Melo, Cristiane Moutinho Lagos; Neves, Juliana Kelle de Andrade Lemoine; da Silva, Nicácio Henrique; Pereira, Valéria Rêgo Alves; Correia, Maria Tereza dos Santos


    An increasing number of biological activities presented by medicinal plants has been investigated over the years, and they are used in the search for new substances with lower side effects. Eugenia uniflora L. and Eugenia malaccensis L. (Myrtaceae) have many folk uses in various countries. This current study was designed to quantify the polyphenols and flavonoids contents and evaluate the immunomodulatory, antioxidant, and cytotoxic potentials of fractions from E. uniflora L. and E. malaccensis L. It was observed that the polyphenol content was higher in ethyl acetate fractions. These fractions have high antioxidant potential. E. malaccensis L. seeds showed the largest DPPH radical scavenger capacity (EC50 = 22.62). The fractions of E. malaccensis L. leaves showed lower antioxidant capacity. The samples did not alter the profile of proinflammatory cytokines and nitric oxide release. The results indicate that species of the family Myrtaceae are rich in compounds with antioxidant capacity, which can help reduce the inflammatory response.

  10. Phyto chemical and antioxidant screening of extracts of Aquilaria malaccensis leaves

    Salmah Moosa


    Aquilaria malaccensis is an endangered economic plant used for production of agar wood worldwide. The sequential maceration extraction methods utilizing solvents with different polarities namely hexane, ethyl acetate and methanol yielded the corresponding crude extract. The aqueous and methanol extracts along with dry powder of leaf of the plant was screened for the presence of phytochemicals. They were also tested for antioxidant activities. The result indicates the presence of alkaloids, flavanoids, triterpenoids, steroids and tannins. The phyto chemical screening suggests that flavanoids present in this species might provide a great value of antioxidant activity. Preliminary screenings of the free radical scavenging activity on the extracts of the plants with 2, 2-Diphenyl-1-picrylhydrazyl (DPPH) were tested and showed positive result. Quarcetine was used as reference standard. The extracts exhibited strong antioxidant activity radical scavenging activity with IC50 value of 8.0 x 102 μg/ ml, 1.6 x 102 μg/ ml, 1.4 x 102 μg/ ml, 30.0 μg/ ml and 3.33 μg/ ml for hexane, DCM, ethyl acetate, methanol and quercetine respectively. Determination on antioxidant activity of each crude extract showed that methanol crude extract had the highest IC50 value than ethyl acetate, dichloromethane and hexane crude extract. This means that methanol possess the highest inhibition of DPPH radical scavenging activity compared to the other crudes but still lower than Quercetin (standard). Phyto chemical analysis on the hexane extract of Aquilaria malaccensis has been conducted. Several chromatographic methods have been employed to the hexane of the leaves which led to the isolation of three compounds namely Stigmasterol, β-sitosterol and 3-fridelanol. The present study has proved the usefulness of agar wood tree for medicinal purposes and its potential as a source of useful drugs. (author)

  11. Growth and Mineral Nutrition of Aquilaria Malaccensis (Karas) in Two Habitats as Affected by Different Cultural Practices

    Nashriyah Mat; Shamsiah Abdul Rahman; Norhayati Ngah; Khairil Mahmud; Nurrul Akmar Rosni; Khairuddin Abdul Rahim


    Effects of cultural practice under different habitats, of well-managed monoculture plantation and growing wild under rubber trees, were studied in Aquilaria malaccensis (Karas) leaves. This study was carried out on Karas growing in these two habitats each from Lipis, Pahang and Sepang, Selangor areas in Malaysia; under the control and induced treatments. The parameters studied include wet and dry weight of 50 matured leaves, iron and zinc elemental contents in leaf, iron and zinc uptakes from soil, and leaf and soil moisture contents. Iron and zinc were analysed in Karas leaves and soil by using Instrumental Neutron Activation Analysis (INAA) technique. (Author)




    Full Text Available Aquilaria spp produced agarwood as nonwood forest production, and has high economic value. A. malaccensis is susceptible to white rot diseases and termites. On the other hand most of the community plantations are a mixed culture with rubber trees, oil palms and with high risk of con-tamination causing white root diseases. Besides that, vegetative propagation by cuttings, stumping or air layering are still very diffi cult with low percentage of growth. h e objectives of this research were to analyze the best suitable micrograft type, changes of SDS-PAGE protein band patterns of compatible and incompatible micrografts with several combinations of gaharu planlets in in vitro condition, and histology of union area between rootstocks and scion. h e results showed that wedge or V type was the best of the micrografs. MS medium with the addition of 3 mg/L IBA was the best medium for gaharu planlet growth after micrografting. Acclimatization was conducted in husk chacoal and top soil (1:1 medium and grown under plastic house of 70% shading with paranet. Compatible combination (Ac/Am of micrografting showed that anatomy structure of union area is the same as anatomy structure of non micrograftd planlet. While incompatible (Gv/Am mi-crografting produced necrotic layer growth from pith and parenchymateous tissues of the wood in union area along the middle of radial shoot. Recovery period of union area between stocks and scion is initiated by callus formation from the pith and parenchymatous tissues of the wood. Callus will diff erentiate into mature cells or tissue and become combined phloem and xylem vessels be-tween rootstocks and scion. SDS-PAGE protein band pattern on compatible combination was the same as plants originated from seedlings. While, incompatible combination produced new protein bands with molecular weight around 21 and 30 kD.

  13. Multi-platform metabolomics and a genetic approach support the authentication of agarwood produced by Aquilaria crassna and Aquilaria malaccensis.

    Nguyen, Huy Truong; Min, Jung-Eun; Long, Nguyen Phuoc; Thanh, Ma Chi; Le, Thi Hong Van; Lee, Jeongmi; Park, Jeong Hill; Kwon, Sung Won


    Agarwood, the resinous heartwood produced by some Aquilaria species such as Aquilaria crassna, Aquilaria malaccensis and Aquilaria sinensis, has been traditionally and widely used in medicine, incenses and especially perfumes. However, up to now, the authentication of agarwood has been largely based on morphological characteristics, a method which is prone to errors and lacks reproducibility. Hence, in this study, we applied metabolomics and a genetic approach to the authentication of two common agarwood chips, those produced by Aquilaria crassna and Aquilaria malaccensis. Primary metabolites, secondary metabolites and DNA markers of agarwood were authenticated by 1 H NMR metabolomics, GC-MS metabolomics and DNA-based techniques, respectively. The results indicated that agarwood chips could be classified accurately by all the methods illustrated in this study. Additionally, the pros and cons of each method are also discussed. To the best of our knowledge, our research is the first study detailing all the differences in the primary and secondary metabolites, as well as the DNA markers between the agarwood produced by these two species. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. Syringophilopsis davidi sp. nov. (Prostigmata, Syringophilidae) a new quill mite species parasitizing Calandrella brachydactyla (Passeriformes, Alaudidae) in Egypt.

    Glowska, Eliza; Laniecka, Izabella


    A new quill mite species Syringophilopsis davidi sp. nov. (Prostigmata, Syringophilidae) parasitizing Greater Short-toed Lark Calandrella brachydactyla (Leisler) (Passeriformes, Alaudidae) in Egypt is described. This new species is distinguishable from S. tyranni Bochkov and Galloway by 10-13 chambers of the peritremal lateral branches, setae se located slightly anterior to c1, and by setae ag2 about twice longer than the genital setae. This is the first record of this genus from the hosts of the family Alaudidae and in the Arab Republic of Egypt.

  15. Evaluation of Antioxidant, Immunomodulatory, and Cytotoxic Action of Fractions from Eugenia uniflora L. and Eugenia malaccensis L.: Correlation with Polyphenol and Flavanoid Content

    Figueir?a, Evellyne de Oliveira; Nascimento da Silva, Lu?s Cl?udio; de Melo, Cristiane Moutinho Lagos; Neves, Juliana Kelle de Andrade Lemoine; da Silva, Nic?cio Henrique; Pereira, Val?ria R?go Alves; Correia, Maria Tereza dos Santos


    An increasing number of biological activities presented by medicinal plants has been investigated over the years, and they are used in the search for new substances with lower side effects. Eugenia uniflora L. and Eugenia malaccensis L. (Myrtaceae) have many folk uses in various countries. This current study was designed to quantify the polyphenols and flavonoids contents and evaluate the immunomodulatory, antioxidant, and cytotoxic potentials of fractions from E. uniflora L. and E. malaccens...

  16. Detection, Prevalence and Phylogenetic Relationships of Demodex spp and further Skin Prostigmata Mites (Acari, Arachnida) in Wild and Domestic Mammals.

    Sastre, Natalia; Francino, Olga; Curti, Joseph N; Armenta, Tiffany C; Fraser, Devaughn L; Kelly, Rochelle M; Hunt, Erin; Silbermayr, Katja; Zewe, Christine; Sánchez, Armand; Ferrer, Lluís


    This study was conceived to detect skin mites in social mammals through real-time qPCR, and to estimate taxonomic Demodex and further Prostigmata mite relationships in different host species by comparing sequences from two genes: mitochondrial 16S rRNA and nuclear 18S rRNA. We determined the mite prevalence in the hair follicles of marmots (13%) and bats (17%). The high prevalence found in marmots and bats by sampling only one site on the body may indicate that mites are common inhabitants of their skin. Since we found three different mites (Neuchelacheles sp, Myobia sp and Penthaleus sp) in three bat species (Miotis yumanensis, Miotis californicus and Corynorhinus townsendii) and two different mites (both inferred to be members of the Prostigmata order) in one marmot species (Marmota flaviventris), we tentatively concluded that these skin mites 1) cannot be assigned to the same genus based only on a common host, and 2) seem to evolve according to the specific habitat and/or specific hair and sebaceous gland of the mammalian host. Moreover, two M. yumanensis bats harbored identical Neuchelacheles mites, indicating the possibility of interspecific cross-infection within a colony. However, some skin mites species are less restricted by host species than previously thought. Specifically, Demodex canis seems to be more transmissible across species than other skin mites. D. canis have been found mostly in dogs but also in cats and captive bats. In addition, we report the first case of D. canis infestation in a domestic ferret (Mustela putorius). All these mammalian hosts are related to human activities, and D. canis evolution may be a consequence of this relationship. The monophyletic Demodex clade showing closely related dog and human Demodex sequences also supports this likely hypothesis.

  17. Detection, Prevalence and Phylogenetic Relationships of Demodex spp and further Skin Prostigmata Mites (Acari, Arachnida in Wild and Domestic Mammals.

    Natalia Sastre

    Full Text Available This study was conceived to detect skin mites in social mammals through real-time qPCR, and to estimate taxonomic Demodex and further Prostigmata mite relationships in different host species by comparing sequences from two genes: mitochondrial 16S rRNA and nuclear 18S rRNA. We determined the mite prevalence in the hair follicles of marmots (13% and bats (17%. The high prevalence found in marmots and bats by sampling only one site on the body may indicate that mites are common inhabitants of their skin. Since we found three different mites (Neuchelacheles sp, Myobia sp and Penthaleus sp in three bat species (Miotis yumanensis, Miotis californicus and Corynorhinus townsendii and two different mites (both inferred to be members of the Prostigmata order in one marmot species (Marmota flaviventris, we tentatively concluded that these skin mites 1 cannot be assigned to the same genus based only on a common host, and 2 seem to evolve according to the specific habitat and/or specific hair and sebaceous gland of the mammalian host. Moreover, two M. yumanensis bats harbored identical Neuchelacheles mites, indicating the possibility of interspecific cross-infection within a colony. However, some skin mites species are less restricted by host species than previously thought. Specifically, Demodex canis seems to be more transmissible across species than other skin mites. D. canis have been found mostly in dogs but also in cats and captive bats. In addition, we report the first case of D. canis infestation in a domestic ferret (Mustela putorius. All these mammalian hosts are related to human activities, and D. canis evolution may be a consequence of this relationship. The monophyletic Demodex clade showing closely related dog and human Demodex sequences also supports this likely hypothesis.

  18. Combined effect of an antifeedant alpha-amylase inhibitor and a predator Cheyletus malaccensis in controlling the stored-product mite Acarus siro

    Hubert, J.; Hýblová, Jana; Münzbergová, Zuzana; Pekár, S.; Křížková, I.; Marešová, Lucie; Stejskal, V.; Mareš, Michael


    Roč. 32, č. 1 (2007), s. 41-49 ISSN 0307-6962 R&D Projects: GA MŠk(CZ) 1P04OC842.20; GA MŠk(CZ) 1P04OC853.003; GA AV ČR IAA400550617; GA ČR GP203/02/P081 Institutional research plan: CEZ:AV0Z40550506; CEZ:AV0Z60050516 Keywords : alpha-amylase * Acarus siro * Cheyletus malaccensis * digestion protease Subject RIV: CC - Organic Chemistry Impact factor: 1.410, year: 2007

  19. Phytoremediation potential of Cd and Zn by wetland plants, Colocasia esculenta L. Schott., Cyperus malaccensis Lam. and Typha angustifolia L. grown in hydroponics.

    Chayapan, P; Kruatrachue, M; Meetam, M; Pokethitiyook, P


    Cadmium and zinc phytoremediation potential of wetland plants, Colocasia esculenta, Cyperus malaccensis, and Typha angustifolia, was investigated. Plants were grown for 15 days in nutrient solutions containing various concentrations of Cd (0, 5, 10, 20, 50 mg l(-1)) and Zn (0, 10, 20, 50, 100 mg l(-1)). T angustifolia was tolerant to both metals as indicated by high RGR when grown in 50 mg I(-1) Cd and 100 mg I(-1) Zn solutions. All these plants accumulated more metals in their underground parts and > 100 mg kg(-1) in their aboveground with TF values 10,000 mg kg(-1) in its aboveground parts with TF > 1. T angustifolia exhibited highest biomass production and highest Cd and Zn uptake, confirming that this plant is a suitable candidate for treating of Cd contaminated soil/sediments.

  20. Discriminative Analysis of Different Grades of Gaharu (Aquilaria malaccensis Lamk. via 1H-NMR-Based Metabolomics Using PLS-DA and Random Forests Classification Models

    Siti Nazirah Ismail


    Full Text Available Gaharu (agarwood, Aquilaria malaccensis Lamk. is a valuable tropical rainforest product traded internationally for its distinctive fragrance. It is not only popular as incense and in perfumery, but also favored in traditional medicine due to its sedative, carminative, cardioprotective and analgesic effects. The current study addresses the chemical differences and similarities between gaharu samples of different grades, obtained commercially, using 1H-NMR-based metabolomics. Two classification models: partial least squares-discriminant analysis (PLS-DA and Random Forests were developed to classify the gaharu samples on the basis of their chemical constituents. The gaharu samples could be reclassified into a ‘high grade’ group (samples A, B and D, characterized by high contents of kusunol, jinkohol, and 10-epi-γ-eudesmol; an ‘intermediate grade’ group (samples C, F and G, dominated by fatty acid and vanillic acid; and a ‘low grade’ group (sample E and H, which had higher contents of aquilarone derivatives and phenylethyl chromones. The results showed that 1H- NMR-based metabolomics can be a potential method to grade the quality of gaharu samples on the basis of their chemical constituents.

  1. Diversity of Quill Mites of the Family Syringophilidae (Acari: Prostigmata) Parasitizing Owls (Aves: Strigiformes) With Remarks on the Host-Parasite Relationships.

    Skoracki, Maciej; Unsoeld, Markus; Marciniak, Natalia; Sikora, Bozena


    The quill mite fauna of the family Syringophilidae (Acari: Prostigmata: Cheyletoidea) associated with owls (Aves: Strigiformes) is reviewed. A new genus is proposed, Neobubophilus Skoracki & Unsoeld gen. nov. It differs from closely related Bubophilus (Bubophilus Philips and Norton, 1978) by the absence of leg setae vsII in the both sexes. In addition, four new species are described: (1) Neobubophilus cunicularius Skoracki & Unsoeld sp. nov. from Athene cunicularia (Molina, 1782) (Strigidae) from Paraguay; (2) Neobubophilus atheneus Skoracki & Unsoeld sp. nov. from Athene noctua (Scopoli, 1769) and Athene brama (Temminck, 1821) (Strigidae), both from India; (3) Bubophilus tytonus Skoracki & Unsoeld sp. nov. from Tyto alba affinis (Blyth, 1862) (Tytonidae) from Cameroon, and (4) Megasyringophilus dalmas Skoracki & Unsoeld sp. nov. from Megascops choliba (Vieillot, 1817) (Strigidae) from Venezuela. The following new host species are given: Bubo bubo (Linnaeus, 1758) (Strigidae) from Nepal for Bubophilus ascalaphus (Philips and Norton 1978) and Strix woodfordii (Smith, 1834) (Strigidae) from Tanzania for Bubophilus aluconis (aluconis Nattress and Skoracki 2009). A key for syringophilid genera and species associated with owls is constructed. The host-parasite relationships of syringophilid mites and owls are discussed. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: Version of Record, first published online May 24, 2016 with fixed content and layout in compliance with Art. ICZN.

  2. Structural and Function Prediction of Musa acuminata subsp. Malaccensis Protein

    Anum Munir


    Full Text Available Hypothetical proteins (HPs are the proteins whose presence has been anticipated, yet in vivo function has not been built up. Illustrating the structural and functional privileged insights of these HPs might likewise prompt a superior comprehension of the protein-protein associations or networks in diverse types of life. Bananas (Musa acuminata spp., including sweet and cooking types, are giant perennial monocotyledonous herbs of the order Zingiberales, a sister grouped to the all-around considered Poales, which incorporate oats. Bananas are crucial for nourishment security in numerous tropical and subtropical nations and the most prominent organic product in industrialized nations. In the present study, the hypothetical protein of M. acuminata (Banana was chosen for analysis and modeling by distinctive bioinformatics apparatuses and databases. As indicated by primary and secondary structure analysis, XP_009393594.1 is a stable hydrophobic protein containing a noteworthy extent of α-helices; Homology modeling was done utilizing SWISS-MODEL server where the templates identity with XP_009393594.1 protein was less which demonstrated novelty of our protein. Ab initio strategy was conducted to produce its 3D structure. A few evaluations of quality assessment and validation parameters determined the generated protein model as stable with genuinely great quality. Functional analysis was completed by ProtFun 2.2, and KEGG (KAAS, recommended that the hypothetical protein is a transcription factor with cytoplasmic domain as zinc finger. The protein was observed to be vital for translation process, involved in metabolism, signaling and cellular processes, genetic information processing and Zinc ion binding. It is suggested that further test approval would help to anticipate the structures and functions of other uncharacterized proteins of different plants and living being.

  3. [Investigation on Cheyletoidea mites breeding in culture environment of Eupolyphaga sinensis and morphologic observation of Eucheyletia reticulate Cunliffe].

    Ning, Tao; Wei, Guo; Shao-Sheng, Wang; Chao-Pin, Li


    To investigate the species of Cheyletoidea mites breeding in the culture environment of Eupolyphaga sinensis and to observe the morphology of Eucheyletia reticulata Cunliffe. The soil samples from an E. sinensis farm in northern Anhui were collected. The mites in the soil samples were separated directly under a microscope and the glass specimens were made to observe the morphological feature of the mites under a light microscope, then the mites species were identified and classified based on the morphological characteristics. In the culture soil of E. sinensis , totally 7 kinds of Cheyletoidea mites were isolated, namely Eucheyletia reticulata Cunliffe, Cheyletus eruditus Schrank, Cheyletus malaccensis Oudemans, Cheyletus troussarti Oudemans, Cheyletus aveisor Rohdendorz, Acaropsis sollers Rohdendorz and Cheletomorpha lepidopterorum Shaw. They belonged to genera Eucheyletia , Cheletomorpha , Acaropsis and Cheyletus of Cheyletidae Leach family. The Eucheyletia reticulata Cunliffe was firstly found in the culture environment of E. sinensis , and its gnathosoma was large, the pedipalpal femurs were expanding and there were two strips of comb hair and two smooth bristles on the pedipalpal tarsus, and the back of the body was covered with two pieces of tergum, which were decorated with reticular pattern. The body and foot setae were fan-shape. There are various of Cheyletoidea mites found in the breeding environment of E. sinensis . These mites are important species for pest control in the culture environments of E. sinensis . Related measures should be taken to prevent the excessive growth of Cheyletoidea mites, so as to avoid the adverse effects on the quality and quantity of E. sinensis .


    Jočić, Ivona; Petanović, Radmila


    Accounts are given of the eriophyoid fauna of Montenegro. Based on the literature records, a total of 156 mite species are listed from 130 host species of 42 plant families. The families Phytoptidae, Eriophidae and Diptilomiopidae are represented by 6, 138 and 12 species, respectively. Fifteen new species for science have been described from this area.

  5. The Erythraeoidea (Trombidiformes: Prostigmata) as Biological Control Agents, with Special Reference to the Genus Balaustium

    Muñoz-Cárdenas, K.; Fuentes-Quintero, L.S.; Rueda-Ramirez, D.; Rodríguez, C.D.; Cantor, R.F.; Carrillo, D.; de Moraes, G.J.; Peña, J.E.


    Erythraeoidea is a widely distributed group with great potential for practical use in biological control programs, but whose study has been limited due to the complex life cycle that often includes alteration in feeding behaviour and habitat. Several associations of these mites to different species

  6. Higher-level molecular phylogeny of the water mites (Acariformes: Prostigmata: Parasitengonina: Hydrachnidiae).

    Dabert, Miroslawa; Proctor, Heather; Dabert, Jacek


    With nearly 6000 named species, water mites (Hydrachnidiae) represent the largest group of arachnids to have invaded and extensively diversified in freshwater habitats. Water mites together with three other lineages (the terrestrial Erythraiae and Trombidiae, and aquatic Stygothrombiae), make up the hyporder Parasitengonina, which is characterized by having parasitic larvae and predatory nymphs and adults. Relationships between the Hydrachnidiae and other members of the Parasitengonina are unclear, as are relationships among the major lineages of water mites. Monophyly of water mites has been asserted, with the possible exception of the morphologically distinctive Hydrovolzioidea. Here we infer the phylogeny of water mites using multiple molecular markers and including representatives of all superfamilies of Hydrachnidiae and of almost all other Parasitengonina. Our results support a monophyletic Parasitengonina including Trombidiae, Stygothrombiae, and Hydrachnidiae. A monophyletic Hydrachnidiae, including Hydrovolzioidea, is strongly supported. Terrestrial Parasitengonina do not form a monophyletic sister group to water mites. Stygothrombiae is close to water mites but is not nested within this clade. Water mites appear to be derived from ancestors close to Stygothrombiae or the erythraoid group Calyptostomatoidea; however, this relationship is not clear because of extremely short branches in this part of the parasitengonine tree. We recovered with strong support all commonly accepted water mite superfamilies except for Hydryphantoidea, which is clearly paraphyletic. Our data support the previously proposed clades Protohydrachnidia (Hydrovolzioidea and Eylaoidea), Euhydrachnidia (all remaining superfamilies), and the euhydrachnid subclade Neohydrachnidia (Lebertioidea, Hydrachnoidea, Hygrobatoidea, and Arrenuroidea). We found that larval leg structure and locomotory behavior are strongly congruent with the molecular phylogeny. Other morphological and behavioral characters, including host choice, are not as strongly correlated with phylogeny. Molecular dating suggests that the Hydrachnidiae arose about 235MYA, and that Neohydrachnidia began to diversify about 155MYA. Our results provide a strong framework for classification and for further elaboration at finer taxonomic scales, which will allow testing of ecological and behavioral hypotheses associated with the transition from terrestrial to aquatic life. Copyright © 2016 Elsevier Inc. All rights reserved.


    M. Soleimani, J. Rafinejad


    Full Text Available House dust mites have been shown to be strongly associated with allergic respiratory diseases such as, bronchial asthma, rhinitis and atopic dermatitis in the world. The climatic conditions of Bandar-Abbas, which is located in a coastal area and has a humid subtropical climate, provide a suitable place to proliferate mites. The aim of this study was to determine the contamination rate and analyze the house dust mite fauna in hotels and inns in Bandar-Abbas that had not been investigated previously. In this study 6 hotels and 6 inns were selected randomly in six areas of Bandar-Abbas. Two dust samples were collected from each place with a vacuum cleaner. One square meter of carpets and mattresses were vacuumed for a period of 1 min. Then the samples were cleared in lactic acid and then mites were mounted in Hoyer's medium for study and identification. A total of 2644 mites were collected and identified. The major mite family was Pyroglyphidae (98%. Dermatophagoides pteronyssinus was the most frequent and most numerous species recorded, occurring in 91% of samples examined and forming 88% of the Pyroglyphidae and 86% of the total mite populations. The family Cheyletidae was less commonly found with Cheyletus malaccensis (2%. Most of the mites were isolated from the carpets (57.5%, and a smaller number from mattresses (42.5%. Mites were present in 96% of the dust samples. Results revealed that all inns and 83% of hotels were contaminated by more than one species of mite and 34% of them had a population of more than 100 mites /g dust. This rate of contamination can be a major risk factor in asthma and other respiratory allergic diseases

  8. New species and new records of mites of the genus Stigmaeus(Acari: Prostigmata: Stigmaeidae) from Crimea.

    Khaustov, Alexander A


    Three new species of the genus Stigmaeus Koch, 1836 (Acari: Stigmaeidae) are described from various habitats in Crimea: Stigmaeus kuznetsovi sp. nov. from nests of Microtus socialis (Rodentia: Cricetidae); S. mitrofanovi sp. nov. from galleries of Pityogenes bistridentatus (Coleoptera: Curculionidae) under the bark of Pinus pallasiana, and S. silvestris sp. nov. from rotten log of Pinus pallasiana. Stigmaeus corticeus Kuznetsov and Wainstein, 1977 and S. maraghehiensis Bagheri and Ueckermann, 2012 are recorded for the first time in Crimea. A key to species of the genus Stigmaeus of Crimea is provided.

  9. Homoplastic evolution and host association of Eriophyoidea (Acari, Prostigmata) conflict with the morphological-based taxonomic system.

    Li, Hao-Sen; Xue, Xiao-Feng; Hong, Xiao-Yue


    The superfamily Eriophyoidea is exceptionally diverse and its members are highly host-specific. Currently, the taxonomy of this group is based on morphology only. However, phylogenetic relationships in this group could be incorrect if the diagnostic morphological characters are homoplastic. Therefore, the phylogeny of 112 representative taxa of Eriophyoidea from China was determined using 18S, 28S D2-5 and D9-10 rRNA. Phylogenetic relationships were inferred through Bayesian, maximum likelihood and maximum parsimony methods, and then a number of clades or major clades were defined according to robust phylogenetic topologies combined with morphological comparison. Tests of monophyly showed that two of three families of Eriophyoidea as well as one subfamily and four tribes were not monophyletic. Ancestral character state reconstruction (ACSR) showed that five diagnostic morphological characters evolved several times, confounding the current taxonomy. Additionally, reconstruction of the history of host plant colonization suggested host switching occurred in a limited range of host plants. The host association data made it possible to determine taxonomic relationships more accurately. These results show that by integrating morphological and molecular information and host plant choice, it is possible to obtain a more accurate taxonomy and a deeper phylogenetic understanding of Eriophyoidea. Copyright © 2014 Elsevier Inc. All rights reserved.

  10. Cloning, expression and characterization of the endoglucanase gene from Bacillus subtilis UMC7 isolated from the gut of the indigenous termite Macrotermes malaccensis in Escherichia coli

    Kelvin Swee Chuan Wei


    Conclusions: The recombinant endoglucanase showed a threefold increase in extracellular enzyme activity compared with the wild-type strain. This result revealed the potential of endoglucanase expression in E. coli, which can be induced for the overexpression of the enzyme. The enzyme has a broad range of activity with high specificity toward cellulose.

  11. Inoculate Release of Stethorus gilvifrons Mulsan (Coleoptera: Coccinellidae for Biological Control of Date Palm Spider Mite, Oligonychus afrasiaticusMcGregor (Prostigmata: Tetranychidae

    M. Latifian


    Full Text Available Introduction: The spider mite, Oligonychus afrasiaticus feeds by sucking the sap from the immature fruits tissue. The natural color of fruits changes to pale yellow or gray by mite's feeding. Damaged fruit are cracked and its damage can dry out the fruits. Because of resistance to pesticides, resurgence of date palm spider mite causes to disrupt the natural balance of their population. Tiny black ladybird beetle, Stethorous gilvifrons is the most important and active lady beetle species in Khuzestan province and is very effective on biological control of the spider mite. Determination of the amount and release time of the lady beetles are the most important factors in the implementation of biological control programs of date palm spider mite. So, careful monitoring, time of the release and the ability of deployment of predatory ladybird are essential steps to success in the programs of biological control. Materials and Methods: This research was conducted in Shadegan region of Khuzestan province. The nested design was used to compare the efficiency of different inoculate release methods of the predator, S. gilvifrons. The main niches include three release times which were at the time of emergence, three days and one week after emergence of date palm spider mite in date palm plantation. Sub nesting including three different levels of predator release including minimum, moderate and maximum release with 0.5, 1 and 3 predator /m2 per day and were continued for two weeks. The two or three-days ladybirds were used to release. First, the infected clusters were covered by mesh fabric and ladybirds were released under them. After a week, mantles were opened up to the establishment of ladybird run on the normal condition of date palm plantations. This experiment was repeated three times, and each replication consists of a quarter- hectare plantation with dominant cultivar Sayer.Three date Palm trees from each release and control were randomly selected. One hundred fruits from10 major's of each bunches were randomly selected and the number of spider mite (prey and coccinellid (predator were counted in different developmental stages. The relationship between predator and prey was calculated by using Pearson's correlation in different treatments as an index of density-dependent reaction of the predator to prey density and its establishment. Results and Discussion: Results showed that there were significant difference between treatments of release on seasonal mite and lady beetle populations and the average seasonal growth reduction rate at 1% probability level. The maximum difference in the number of mite – infested treatment and control occurred at maximum release with predatory mite. The maximum density of the lady beetle population was observed around mid to late June. Date palm fruits were been at Kharg phonological growth at this time and they had the greatest sensitivity to the mite population. The highest correlation coefficient occurred in terms of release time coincided with the moderate and maximum release of spider mite´s predator. So, the predator showed density - depend reaction and its establishment were occurred. Release of three and one lady beetle/m2 and simultaneously with the appearance of spider mite had powerful and significant correlation. In those circumstances, the density-dependent response of lady beetle was observed. The prey and the predator population densities have several fluctuations around their equilibrium level during the season. Number of predator population declines and prey population increases from their equilibrium levels were reduced by the simultaneous release of the predator to start prey activities. The predatory failure establishment is zero in the maximum release.The highest control of date palm spider mite was about 83.28% at release treatments. In all releasing treatments, the level of biological control was increased with increasing the number of coccinelid releases per unit. Conclusions: The highest predator efficiency were calculated in the maximum release (3 coccinellid per square meter and simultaneously with the appearance of spider mite in date palm plantation. The control performance was 83.27 percent in this condition. Understanding of the fluctuations of the date palm pests and their natural enemies and the effect of climatic factors on the fluctuations are necessary to operate the proposed models for biological date palm pest control. The success of this predator is high in terms of the date ecosystem, and the susceptibility of palm fruit to pests decreased at the end of the season.

  12. Tri-trophic level Impact of Host Plant Linamarin and Lotaustralin on Tetranychus urticae (Mesostigmata: Tetranychidae) and its predator Phytoseiulus persimilis (Prostigmata: Phytoseiidae)

    The impact of linamarin and lotaustralin content in the leaves of Phaseolus lunatus L. on the second and third trophic levels was studied in Tetranychus urticae (Koch) and its predator Phytoseiulus persimilis Athias-Henriot. Chemical analyzes showed that the content of linamarin was higher in termin...

  13. Distribución geográfica del género Pimeliaphilus Trägårdh (Acari: Prostigmata asociados a triatominos (Hemiptera: Reduviidae

    Gerardo A. MARTI


    Full Text Available Se brinda un listado de especies del género Pimeliaphilus Trägårdh asociadas a diferentes especies de triatominos, con sus respectivas coordenadas geográficas de todo el continente americano. Se realizaron viajes de campo para incorporar nuevos registros a una recopilación bibliográfica. Se extiende la distribución geográfica de Pimeliaphilus triatomae Cunliffe, con dos registros para la provincia de Chaco (Argentina y se amplía el rango de hospedadores ya que se citan por primera vez asociados a Triatoma delpontei Romaña & Abalos.

  14. The role of mite pocket-like structures on Agama caudospinosa (Agamidae) infested by Pterygosoma livingstonei sp. n. (Acari: Prostigmata: Pterygosomatidae)

    Bertrand, M.; Modrý, David


    Roč. 51, č. 1 (2004), s. 61-66 ISSN 0015-5683 R&D Projects: GA ČR GA524/00/P015; GA ČR GP524/03/D104 Institutional research plan: CEZ:AV0Z6022909 Keywords : Pterygosomatidae * mite pockets * host-parasite relationships Subject RIV: EG - Zoology Impact factor: 0.837, year: 2004

  15. A new genus and species Mangalaus krishianusandhanus (Acari: Eriophyidae) from India

    Mangalaus ikrishianusandhanus n. gen., n. sp., (Acari: Prostigmata: Eriophyoidea), collected from erineum on the underside of leaves of Cordia dichotoma (Boraginaceae) is described and illustrated from specimens collected at the Indian Agricultural Research Institute (IARI) in New Delhi, India....

  16. Journal of Genetics | Indian Academy of Sciences

    based STRUCTURE grouped all the accessions in two clusters with significant intermixing between populations, therefore, revealed that two genetically distinct gene pools are operating in the A. malaccensis populations cultivated in home gardens ...

  17. Browse Title Index

    Items 151 - 200 of 917 ... Vol 7, No 1 (2007), Chemical composition, functional and baking properties ... syzygium malaccensis and Eugenia owariensis apples, Abstract PDF ... of cocoa juice conducted by spontaneous and induced processes for ...

  18. Gyrinops ledermannii (Thymelaeaceae), being an agarwood-producing species prompts call for further examination of taxonomic implications in the generic delimitation between Aquilaria and Gyrinops

    Compton, J.G.S.; Zich, F.A.


    Field research conducted in Papua New Guinea (PNG) has recorded Gyrinops ledermannii Domke (Thymelaeaceae) as an agarwood-producing species for the first time. Aquilaria malaccensis Lam. (incl. A. agallocha Roxb.; Thymelaeaceae) or agarwood (also known as aloeswood, eaglewood, gaharu, and

  19. Colchicine and amiprophos-methyl (APM) in polyploidy induction in ...



    Oct 12, 2011 ... The objective was to assess the colchicine and amiprophos-methyl (APM) concentration and exposure period in the chromosome duplication of breed banana plants diploids. Banana stem tips were used from the following genotypes: breed diploids (1304-04 [Malaccensis x Madang (Musa acuminata spp.

  20. Colchicine and amiprophos-methyl (APM) in polyploidy induction in ...

    The objective was to assess the colchicine and amiprophos-methyl (APM) concentration and exposure period in the chromosome duplication of breed banana plants diploids. Banana stem tips were used from the following genotypes: breed diploids (1304-04 [Malaccensis x Madang (Musa acuminata spp. banksii)] and ...

  1. Geographic variation in ectoparasitic mites diversity in Tadarida Brasiliensis (Chiroptera, Molossidae

    Tatiana C. Pesenti


    Full Text Available Tadarida brasiliensis (Geoffroy, 1824, the Brazilian free-tailed bat, is an insectivorous bat that occurs from southern United States of America to southern South America. In this study we present the first data on diversity of ectoparasitic mites of T. brasiliensis in Brazil. A compilation and analysis of the studies of mite diversity conducted in different points the geographic distribution this bat species are provided. The mites were collected from March 2010 to November 2011 on 160 T. brasiliensis adult bats captured in southern Brazil. Four species of mites have been found: Chiroptonyssus robustipes (Ewing, 1925, Ewingana longa (Ewing, 1938, Ewingana inaequalis (Radford, 1948, and specimens of Cheyletidae. Chiroptonyssus robustipes was the most prevalent species (100%, followed by E. longa (20%, E. inaequalis (10%, and specimens of Cheyletidae (1.25%. The data currently available show that C. robustipes parasitizes T. brasiliensis throughout its region of occurrence, and this mite is highly prevalent and abundant. The two species of Ewingana accompany the geographical distribution of T. brasiliensis, but with much lower prevalence and abundance.

  2. Evolution of the Banana Genome (Musa acuminata) Is Impacted by Large Chromosomal Translocations.

    Martin, Guillaume; Carreel, Françoise; Coriton, Olivier; Hervouet, Catherine; Cardi, Céline; Derouault, Paco; Roques, Danièle; Salmon, Frédéric; Rouard, Mathieu; Sardos, Julie; Labadie, Karine; Baurens, Franc-Christophe; D'Hont, Angélique


    Most banana cultivars are triploid seedless parthenocarpic clones derived from hybridization between Musa acuminata subspecies and sometimes M. balbisiana. M. acuminata subspecies were suggested to differ by a few large chromosomal rearrangements based on chromosome pairing configurations in intersubspecies hybrids. We searched for large chromosomal rearrangements in a seedy M. acuminata ssp. malaccensis banana accession through mate-pair sequencing, BAC-FISH, targeted PCR and marker (DArTseq) segregation in its progeny. We identified a heterozygous reciprocal translocation involving two distal 3 and 10 Mb segments from chromosomes 01 and 04, respectively, and showed that it generated high segregation distortion, reduced recombination and linkage between chromosomes 01 and 04 in its progeny. The two chromosome structures were found to be mutually exclusive in gametes and the rearranged structure was preferentially transmitted to the progeny. The rearranged chromosome structure was frequently found in triploid cultivars but present only in wild malaccensis ssp. accessions, thus suggesting that this rearrangement occurred in M. acuminata ssp. malaccensis. We propose a mechanism for the spread of this rearrangement in Musa diversity and suggest that this rearrangement could have played a role in the emergence of triploid cultivars. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  3. Comparative morphological analysis of apple blister mite, Eriophyes mali Nal., a new pest in Serbia

    Biljana Vidović


    Full Text Available The apple blister mite, Eriophyes mali Nalepa, 1926 (Acari: Prostigmata: Eriophyoidea, has been recently found in Serbia as a new pest of apple. The history of its research, the results of a morphological analysis and degree of infestation are presented. A comparison of the main morphological features of mites from different populations of remote geographical origin has shown that the apple blister mite from Serbia is most similar to another European population (Bulgarian [or Austrian?] while it differs from E. mali originating from the USA and New Zealand. The percentage of infestation varied from 1.6% to 87.6%, with an average of 22.4%.

  4. Interspecific differences in growth response and tolerance to the antibiotic sulfadiazine in ten clonal wetland plants in South China.

    Chen, Jinfeng; Xu, Huilian; Sun, Yingbo; Huang, Lili; Zhang, Peixia; Zou, Chunping; Yu, Bo; Zhu, Genfa; Zhao, Chaoyi


    Pollution caused by residual antibiotics is a worldwide environmental issue. Antibiotic residues often occur in aquatic ecosystems, posing threats to the health of aquatic organisms. The effects of antibiotic residues on the growth of crop plants and on human health are reasonably well known. However, less is known about antibiotic effects on wetland plants. Therefore, we studied the response and tolerance of ten clonal wetland plants grown in soil spiked with sulfadiazine at 10 mg kg(-1) (an environmentally relevant concentration) and 100 mg kg(-1). At 10 mg kg(-1), ramet number was the least affected trait, while root number was the most affected among plant species. Plant shoot and total biomass were reduced in all species except in Cyperus malaccensis var. brevifolius and Panicum repens. Chlorophyll content was reduced in Alocasia macrorrhiza, Saururus chinensis, and Commelina diffusa. In general, Panicum paludosum and C. malaccensis var. brevifolius showed the least reduction of growth parameters, whereas growth of both A. macrorrhiza and S. chinensis was severely reduced. At 100 mg kg(-1), negative responses occurred in all species. Comprehensive tolerance analysis revealed that P. paludosum and C. malaccensis var. brevifolius were the species most resistant to sulfadiazine. These species are potential candidates for sulfadiazine polluted wetland restoration. A. macrorrhiza and S. chinensis were the most susceptible species and they should be protected from sulfadiazine pollution. Relative plant shoot biomass and height were the most useful indicators for evaluating plant tolerance to sulfadiazine. Plant tolerance to sulfadiazine was associated with the differences of plants in height and shoot biomass. Copyright © 2015 Elsevier B.V. All rights reserved.

  5. High genetic diversity in a potentially vulnerable tropical tree species despite extreme habitat loss.

    Annika M E Noreen

    Full Text Available Over the last 150 years, Singapore's primary forest has been reduced to less than 0.2% of its previous area, resulting in extinctions of native flora and fauna. Remaining species may be threatened by genetic erosion and inbreeding. We surveyed >95% of the remaining primary forest in Singapore and used eight highly polymorphic microsatellite loci to assess genetic diversity indices of 179 adults (>30 cm stem diameter, 193 saplings (>1 yr, and 1,822 seedlings (<1 yr of the canopy tree Koompassia malaccensis (Fabaceae. We tested hypotheses relevant to the genetic consequences of habitat loss: (1 that the K. malaccensis population in Singapore experienced a genetic bottleneck and a reduction in effective population size, and (2 K. malaccensis recruits would exhibit genetic erosion and inbreeding compared to adults. Contrary to expectations, we detected neither a population bottleneck nor a reduction in effective population size, and high genetic diversity in all age classes. Genetic diversity indices among age classes were not significantly different: we detected overall high expected heterozygosity (He = 0.843-0.854, high allelic richness (R = 16.7-19.5, low inbreeding co-efficients (FIS = 0.013-0.076, and a large proportion (30.1% of rare alleles (i.e. frequency <1%. However, spatial genetic structure (SGS analyses showed significant differences between the adults and the recruits. We detected significantly greater SGS intensity, as well as higher relatedness in the 0-10 m distance class, for seedlings and saplings compared to the adults. Demographic factors for this population (i.e. <200 adult trees are a cause for concern, as rare alleles could be lost due to stochastic factors. The high outcrossing rate (tm = 0.961, calculated from seedlings, may be instrumental in maintaining genetic diversity and suggests that pollination by highly mobile bee species in the genus Apis may provide resilience to acute habitat loss.

  6. Inhibitory effect on nitric oxide production and free radical scavenging activity of Thai medicinal plants in osteoarthritic knee treatment.

    Anuthakoengkun, Areeya; Itharat, Arunporn


    Thai medicine plants used for Osteoarthritis of knee (OA) treatment consist of twelve plants such as Crinumn asiaticum, Cleome viscosa, Drypetes roxburghii, Piper longum, Piper nigrum, Plumbago indica, Alpinia galanga, Curcuma aromatica, Globba malaccensis, Zingiber montanum, Zingiber officinale andZingiberzerumbet. They showedhighfrequency in OA formula. To investigate inhibitory effect on LPS-induced nitric oxide (NO) release from RAW264. 7 cell and free radical scavenging activity usingDPPH assay of these ethanolic plant extracts. Plant materials were extracted by maceration in 95% ethanol. Anti-inflammatory activity were tested on LPS-induced NO production. Free radical scavenging activity was performed by DPPH assay. All of ethanolic extracts exhibited potent inhibitory effect on NO release. The ethanolic extract of Z. zerumbet exhibited the highest inhibitory effect followed by Z. montanum and G. malaccensis, respectively. Except A. galanga and C. viscosa, all extracts possessed more influential than indomethacin (IC50 = 20.32±3.23 μLg/ml), a positive control. The investigation on antioxidant activity suggested that the ethanolic extracts of D. roxburghii, Z. officinale, Z. montanum, C. aromatic, A. galanga, P indica, G malaccensis, P nigrum exhibited antioxidant activity. By means ofD. roxburghii had the highest electron donating activity,followed by Z. officinale. Moreover both extracts were more effective than BHT apositive control (EC50 = 14.04±1.95 μg/ml). Thai medicinal plants had anti-inflammatory activity and could inhibit destruction of articular cartilage that corresponded to the traditional medicine and supported using these medicinal plants for OA treatment.

  7. Extratos de plantas no controle de Rhipicephalus (Boophilus microplus (Canestrini, 1887 (Acari: Ixodidae em laboratório Plant extracts in control of Rhipicephalus (Boophilus microplus (Canestrini, 1887 (Acari: Ixodidae in laboratory

    Sônia Maria Forti Broglio-Micheletti


    Full Text Available Extratos vegetais foram estudados com o objetivo de avaliar suas eficiências no controle de Rhipicephalus (Boophilus microplus (Canestrini, 1887 em laboratório. Fêmeas ingurgitadas de carrapato foram coletadas de bovinos e mantidas em placas de Petri. Foram utilizados extratos orgânicos alcoólicos 2% (peso/volume de sementes de Annona muricata L. (Annonaceae (graviola; flores de Syzygium malaccensis (L. (Myrtaceae (jambo; folhas de Cymbopogon citratus (DC. Stapf (Poaceae (capim-santo; folhas de Azadirachta indica A. Juss (Meliaceae (nim; e extrato hexânico na mesma concentração de A. indica (sementes. Os grupos-controle foram compostos por fêmeas sem tratamento e fêmeas tratadas com água destilada e esterilizada e dimetilsulfóxido (DMSO a uma concentração de 1%. O extrato de A. muricata apresentou o maior poder acaricida, com eficácia de 100%, seguido dos extratos de S. malaccensis (75 e 59,24% e A. indica (65 e 38,49%. Houve 100% de redução na eclosão das larvas quando se utilizou o extrato de sementes de A. muricata.Plant extracts were studied to evaluate its efficiency in the control of Rhipicephalus (Boophilus microplus (Canestrini, 1887 in laboratory. Engorged female ticks were collected from the cattle, kept in Petri dishes. Organic alcoholic extracts 2% (weight/volume were used: seeds of Annona muricata L. (Annonaceae (soursop; flowers of Syzygium malaccensis (L. (Myrtaceae (iamb, leaves of Cymbopogon citratus (DC. Stapf (Poaceae (holy grass, leaves of Azadirachta indica A. Juss (Meliaceae (neem and hexane extract 2% (weight/volume of A. indica (seeds. The control groups consisted of untreated females and females treated with distilled water and sterile and dimethylsulfoxide (DMSO a concentration of 1%. The extract of A. muricata (seed had the highest mortality with acaricide activity and 100% efficacy followed by extracts of S. malaccensis (75 and 59.24% and A. indica (65 and 38.49%. The seed extract of A. muricata

  8. Chemical profiling of gaharu oil

    Mat Rasol Awang; Mohd Fajri Osman; Ahsanulkhaliqin Abd Wahab; Khairuddin Abdul Rahim; Shaiful Azuar Mohamad


    Gaharu oil from Aquilaria agallocha and Aquilaria malaccensis Lamk has been reported to contain different phytochemicals components (Ishihara et al., 1993). There are also differences reported by gaharu oil suppliers. The differences suggested they originate from varied of sources of gaharu wood, oleoresin maturity and extraction technology employed. In this study, gaharu oil purchased from different sources were initially analysed and later cross-examined against chemical components of oil extracted from wood sources systematically graded. The gaharu oil components obtained from this work will be presented and discussed. Initiative to profile oil provides impetus to database development and standardisation of gaharu oil. (Author)

  9. A new species of Lecanorchis (Orchidaceae from Thailand

    Somran Suddee


    Full Text Available Lecanorchis betongensis, a new species from tropical rain forest in southern peninsular Thailand, is described and illustrated. The combination of semicircular column wings and a labellum with an odd number of major veins (but devoid of calli places the new species in sect. Lecanorchis. However, the lack of any fusion between the labellum and the column readily distinguishes L. betongensis from all other species of the genus. The new species seems morphologically closest to L. malaccensis from Thailand, Malaysia and Sumatra.

  10. Effects of coastal marsh conversion to shrimp aquaculture ponds on CH4 and N2O emissions

    Yang, P.; Bastviken, D.; Lai, D. Y. F.; Jin, B. S.; Mou, X. J.; Tong, C.; Yao, Y. C.


    In this study, we compared the CH4 and N2O fluxes from a tidal brackish Cyperus malaccensis marsh ecosystem and nearby shrimp ponds, converted from C. malaccensis marsh in the last 3-4 years, in the Min River estuary of southeast China over the aquaculture period of the year. Significant differences in CH4 and N2O fluxes were observed in space (between brackish marsh and shrimp ponds) and in time (between sampling occasions that were distributed over the aquaculture period). CH4 fluxes from the shrimp ponds were on an average 10-fold higher than from the brackish marsh. N2O emissions, on the other hand, were lower from the shrimp pond (25% of the emissions from the brackish marsh). Accessory data indicates that these patterns were primarily linked to water level variability and temperature (all fluxes), sediment porewater sulfate concentrations (CH4 flux) and total nitrogen concentrations (N2O flux). Our research demonstrates that the coastal marsh ecosystem converted to aquaculture ponds considerably alter emissions of CH4 and N2O and provides input to the global discussion on how to account for emissions from various types of flooded land in greenhouse gas inventories.

  11. Annotation of differentially expressed genes in the somatic embryogenesis of musa and their location in the banana genome.

    Maldonado-Borges, Josefina Ines; Ku-Cauich, José Roberto; Escobedo-Graciamedrano, Rosa Maria


    Analysis of cDNA-AFLP was used to study the genes expressed in zygotic and somatic embryogenesis of Musa acuminata Colla ssp. malaccensis, and a comparison was made between their differential transcribed fragments (TDFs) and the sequenced genome of the double haploid- (DH-) Pahang of the malaccensis subspecies that is available in the network. A total of 253 transcript-derived fragments (TDFs) were detected with apparent size of 100-4000 bp using 5 pairs of AFLP primers, of which 21 were differentially expressed during the different stages of banana embryogenesis; 15 of the sequences have matched DH-Pahang chromosomes, with 7 of them being homologous to gene sequences encoding either known or putative protein domains of higher plants. Four TDF sequences were located in all Musa chromosomes, while the rest were located in one or two chromosomes. Their putative individual function is briefly reviewed based on published information, and the potential roles of these genes in embryo development are discussed. Thus the availability of the genome of Musa and the information of TDFs sequences presented here opens new possibilities for an in-depth study of the molecular and biochemical research of zygotic and somatic embryogenesis of Musa.

  12. Gaharu, from the metabolomic aspect

    Chong Saw Peng; Ahsanulkhaliqin Abdul Wahab; Mohd Fajri Osman; Shyful Azizi Abdul Rahman; Khairuddin Abdul Rahim; Mat Rasol Awang


    Agarwood, one of the timber woody plant which has the similar response as grand fir toward external invasion and is able to produce oleoresin as the secondary metabolite from plant defense system to inhibit the invader and heal the wound. Species of agarwood found in Malaysia is known as Aquilaria malaccensis, and locally known as karas or depu. A. malaccensis is valuable due to its oleoresin (gaharu). Gaharu is a product produced in the secondary metabolic pathway known as terpenoid synthesis pathway. In order to switch on this pathway, the plant defense system need to be induced and lead to the octadecanoid pathway where the linolenic acid (LA) converts to jasmonic acid (JA). Jasmonic acid is the major key to switch the plant metabolic pathway from primary metabolic pathway to secondary metabolic pathway. To prove this hypothesis, some researches on molecular study such as gene expression and protein expression are conducted to identify key components, which will lead to the manipulation of the metabolic pathway. (Author)

  13. Habitat segregation and cryptic adaptation of species of Periophthalmus (Gobioidei: Gobiidae).

    Polgar, G; Zaccara, S; Babbucci, M; Fonzi, F; Antognazza, C M; Ishak, N; Sulaiman, Z; Crosa, G


    A study was conducted on the habitat distribution of four sympatric species of Periophthalmus (the silver-lined mudskipper Periophthalmus argentilineatus, the slender mudskipper Periophthalmus gracilis, the kalolo mudskipper Periophthalmus kalolo and the Malacca mudskipper Periophthalmus malaccensis) from northern Sulawesi. Molecular phylogenetic reconstructions based on one mtDNA marker (16S) were used to validate the morphological taxa, identifying five molecular clades. Periophthalmus argentilineatus includes two molecular species, which are named Periophthalmus argentilineatus clades F and K. Multivariate direct gradient analysis show that these species form three distinct ecological guilds, with the two molecular species occurring in different guilds. Periophthalmus clade F is ecologically eurytypic; Periophthalmus clade K and P. kalolo are prevalent in ecosystems isolated by strong oceanic currents and at shorter distances from the sea; P. gracilis plus P. malaccensis are prevalent in ecosystems connected by shallow coastal waters, in vegetated habitats at larger distances from the sea. This indicates for the first time that mudskipper species exhibit a range of adaptations to semiterrestrialism not only within genera, but even within morphospecies, delineating a much more complex adaptive scenario than previously assumed. © 2017 The Fisheries Society of the British Isles.

  14. The dog mite, Demodex canis: prevalence, fungal co-infection, reactions to light, and hair follicle apoptosis.

    Tsai, Yu-Jen; Chung, Wen-Cheng; Wang, Lian-Chen; Ju, Yu-Ten; Hong, Chin-Lin; Tsai, Yu-Yang; Li, Yi-Hung; Wu, Ying-Ling


    Infection rate, reaction to light, and hair follicle apoptosis are examined in the dogmite, Demodex canis Leydig (Prostigmata: Demodicidae), in dogs from the northern area of Taiwan. An analysis of relevant samples revealed 7.2% (73/1013) prevalence of D. canis infection. Infection during the investigation peaked each winter, with an average prevalence of 12.5% (32/255). The infection rates significantly varied in accordance with month, sex, age, and breed (p canis Bodin (Onygenales: Arthrodermataceae) and Trichophyton mentagrophyte Robin (Blanchard) on the D. canis infected dogs revealed prevalence rates of 4.4% (2/45) and 2.2% (1/45), respectively. Observations demonstrated that D. canis slowly moved from a light area to a dark area. Skin samples were examined for cellular apoptosis by activated caspase3 immunohistochemical staining. Cells that surrounded the infected hair follicles were activated caspase3-positive, revealing cell apoptosis in infected follicles via the activation of caspase3.

  15. Soil microarthropods are only weakly impacted after 13 years of repeated drought treatment in wet and dry heathland soils

    Holmstrup, Martin; Sørensen, Jesper G.; Schmidt, Inger Kappel


    Studies of biological responses in the terrestrial environment to rapid changes in climate have mostly been concerned with aboveground biota, whereas less is known of belowground organisms. The present study focuses on mites and springtails of heathland ecosystems and how the microarthropod...... and temperature. This approach provided an opportunity to study biological responses on a local (within sites) and regional scale. Warming treatments increasing night time temperature (0.3–1 °C higher than ambient at 5 cm soil depth) had no detectable effects on the microarthropod communities. Increased intensity...... and frequency of drought had only weak persistent effects on springtail species composition, but practically no effect on major mite groups (Oribatida, Prostigmata or Mesostigmata) suggesting that ecosystem functions of microarthropods may only be transiently impacted by repeated spring or summer drought....

  16. Minimal barcode distance between two water mite species from Madeira Island: a cautionary tale.

    García-Jiménez, Ricardo; Horreo, Jose Luis; Valdecasas, Antonio G


    In this work, we compare morphological and molecular data in their ability to distinguish between species of water mites (Acari, Prostigmata, Hydrachnidia). We have focused on the two species of the genus Lebertia inhabiting the island of Madeira. While traditional morphological traits were initially sufficient to distinguish between these two species, the molecular data were more dependable on the kind of analysis carried out. Single arbitrary genetic distance (e.g. a K2P distance below 2%) may lead to the conclusion that the specimens under study belong to the same species. Analysing the same specimens with the coalescent model has proved the evolutionary independence of both Lebertia clades in Madeira. Furthermore, multi-rate Poisson Tree Process analysis confirmed both lineages as independent species. Our results agree with previous studies warning of the dangers of rigid species delimitation based on arbitrary molecular distances. In addition, the importance of different molecular data approaches for correct species delimitation in water mites is highlighted.

  17. Seasonal variation in the populations of Polyphagotarsonemus latus and Tetranychus bastosi in physic nut (Jatropha curcas) plantations.

    Rosado, Jander F; Picanço, Marcelo C; Sarmento, Renato A; da Silva, Ricardo Siqueira; Pedro-Neto, Marçal; Carvalho, Marcos Alberto; Erasmo, Eduardo A L; Silva, Laila Cristina Rezende


    Studies on the seasonal variation of agricultural pest species are important for the establishment of integrated pest control programs. The seasonality of pest attacks on crops is affected by biotic and abiotic factors, for example, climate and natural enemies. Besides that, characteristics of the host plant, crop management, location and the pests' bioecology also affect this seasonality. The mites Polyphagotarsonemus latus (Prostigmata: Tarsonemidae) and Tetranychus bastosi (Prostigmata: Tetranychidae) are the most important pests in the cultivation of physic nut, Jatropha curcas (Euphorbiaceae). All parts of J. curcas can be used for a wide range of purposes. In addition many researchers have studied its potential for use as neat oil, as transesterified oil (biodiesel), or as a blend with diesel. However studies about physic nut pests have been little known. The objective of this study was to assess the seasonal variation of P. latus and T. bastosi in physic nut. This study was conducted at three sites in the state of Tocantins, Brazil. We monitored climatic elements and the densities of the two mite species and of their natural enemies for a period of 2 years. Attack by P. latus occurred during rainy seasons, when the photoperiod was short and the physic nut had new leaves. In contrast, attack by T. bastosi occurred during warmer seasons with longer photoperiods and stronger winds. Populations of both mites and their natural enemies were greater in sites with greater plant diversity adjacent to the plantations. The predators found in association with P. latus and T. bastosi were Euseius concordis (Acari: Phytoseiidae), spiders, Stethorus sp. (Coleoptera: Coccinellidae) and Chrysoperla sp. (Neuroptera: Chrysopidae).

  18. Ácaros predadores (Acari em plantas nativas e cultivadas do Estado do Rio Grande do Sul, Brasil Predators mites (Acari in native and cultivated plants of the State of Rio Grande do Sul, Brazil

    Noeli Juarez Ferla


    Full Text Available This research was carried out in twenty counties of the following regions in the state of Rio Grande do Sul: Plain, Central Depression, Plateau and Coast Plain to find out the diversity of mite predators in these places. Forty-six vegetable species were sampled, thirty species of miles of the families Anystidae, Ascidae, Cheyletidae, Cunaxidae, Phyloseiidae and Stigmaeidae were mel. The Phytoseiidae were the mite that presented the greatest diversity, being present in the majority of the sample plants. Most of the Phytoseiidae that were met belong to five species of the Euseius Wainstein, 1962 genus, the second genus of this family was Iphiseiodes DeLeon, 1966, with just one species. The Stigmaeidae come up as second family in number but fewer than Phytoseiidae. In this family, the most common mite belong to the Agistemus Sumers, 1960 genus. The biggest of the mites species (13 species, was met in Morus spp. (Moraceae and Tabebuia spp. (Bignoniaceae; Phaseolus vulgaris (Papilionaceae; only one species of the mite was met in Campomanesia spp. (Myrtaceae, Phaseolus vulgaris (Papilionaceae and Rosa spp. (Rosaceae. In Alamanda spp.(Apocinaceae, Ficus spp. (Moraceae, Jacaranda mimosifolia (Bignoniaceae and Solanum spp. (Solanaceae were met mites predators. A dichotomic key is presented to separate the families, genus and species of the mites.

  19. Role of Predatory Mites in Persistent Nonoccupational Allergic Rhinitis

    Paloma Poza Guedes


    Full Text Available Mites can sensitize and induce atopic disease in predisposed individuals and are an important deteriorating factor in patients with allergic rhinitis, asthma, and atopic dermatitis. Although Pyroglyphidae mites have been extensively studied, very scarce reports are available on Cheyletidae spp. especially regarding human respiratory pathology. The main objective of the present study is to investigate the clinical role of this predator mite (Cheyletus eruditus as a respiratory antigen in a selected sensitized human population. Fifty-two adult patients were recruited from the outpatient allergy clinic to assess their eligibility for the study. The thirty-seven subjects with persistent allergic rhinitis (PAR who fulfilled the ARIA criteria had a positive IgE response confirmed by skin prick test (SPT to C. eruditus. Only those individuals (37/47 with a positive SPT to C. eruditus showed a positive nasal provocation test (NPT, while 10 patients with nonallergic mild-to-moderate persistent rhinitis, control group, had a negative NPT with C. eruditus. The present paper describes a new role for the predator mite Cheyletus eruditus as a respiratory allergen in a selected subset of patients in a subtropical environment afflicted with persistent nonoccupational allergic rhinitis.

  20. Ectoparasites in urban stray cats in Jerusalem, Israel: differences in infestation patterns of fleas, ticks and permanent ectoparasites.

    Salant, H; Mumcuoglu, K Y; Baneth, G


    In a period cross-sectional study performed to examine ectoparasites on 340 stray cats in Jerusalem, Israel, 186 (54.7%) were infested with the cat flea, Ctenocephalides felis (Siphonaptera: Pulicidae), 49 (14.4%) with the cat louse, Felicola subrostratus (Phthiraptera: Trichodectidae), 41 (12.0%) with the ear mite, Otodectes cynotis (Astigmata: Psoroptidae), three (0.9%) with the fur mite, Cheyletiella blakei (Trobidiformes: Cheyletidae), two (0.6%) with the itch mite Notoedres cati (Astigmata: Sarcoptidae), and 25 (7.3%) with ticks of the species Rhipicephalus sanguineus sensu lato (Ixodida: Ixodidae), Rhipicephalus turanicus or Haemaphysalis adleri (Ixodida: Ixodidae). A higher number of flea infestations was observed in apparently sick cats (P < 0.05) and in cats aged < 6 months (P < 0.05). The proportion of flea-infested cats (P < 0.01), as well as the number of fleas per infested cat (P < 0.01), was higher in autumn than in other seasons. By contrast with findings in cats with flea infestations, rates of infestation with ticks were higher amongst cats with clinical signs (P < 0.01) and cats aged ≥ 6 months (P < 0.05). The high rates of ectoparasite infestation in the cats studied constitute a risk for the spread of vector-borne infections of zoonotic and veterinary importance. © 2013 The Royal Entomological Society.

  1. Distribution of heavy metals in Tamshui mangrove forest ecosystem

    Chiu, C Y; Chou, C H


    Tamsui estuary area is one of the few places in Taiwan where mangrove is still growing. Heavy metals, carried by the water of the Tamsui river, are accumulated in the estuary soil. Most heavy metals in soil, however, are immobile under reducing conditions and are fixed in the large amount of organic matter present. Heavy metals are distributed at different concentrations in various tissues of Kandelia candel as well as grasses of Phragmites communis, Imperata cylindrica, and Cyperus malaccensis growing in the swamp area. The concentration of heavy metals was significantly higher root than in stems and leaves. The absorption of heavy metals by the plants was less in soil that was frequently submerged. Kandelia candel seems to have no special tolerance to copper and zinc. The soil environment which favors reduced availability of heavy metals may help Kandelia candel adapt to growth in the polluted estuary.

  2. Persistence of long-distance, insect-mediated pollen movement for a tropical canopy tree species in remnant forest patches in an urban landscape.

    Noreen, A M E; Niissalo, M A; Lum, S K Y; Webb, E L


    As deforestation and urbanization continue at rapid rates in tropical regions, urban forest patches are essential repositories of biodiversity. However, almost nothing is known about gene flow of forest-dependent tree species in urban landscapes. In this study, we investigated gene flow in the insect-pollinated, wind-dispersed tropical tree Koompassia malaccensis in and among three remnant forest patches in the urbanized landscape of Singapore. We genotyped the vast majority of adults (N=179) and a large number of recruits (N=2103) with 8 highly polymorphic microsatellite markers. Spatial genetic structure of the recruit and adult cohorts was significant, showing routine gene dispersal distances of ~100-400 m. Parentage analysis showed that 97% of recruits were within 100 m of their mother tree, and a high frequency of relatively short-distance pollen dispersal (median ~143-187 m). Despite routine seed and pollen dispersal distances of within a few hundred meters, interpatch gene flow occurred between all patches and was dominated by pollen movement: parentage analysis showed 76 pollen versus 2 seed interpatch dispersal events, and the seedling neighborhood model estimated ~1-6% seed immigration and ~21-46% pollen immigration rates, depending on patch. In addition, the smallest patch (containing five adult K. malaccensis trees) was entirely surrounded by >2.5 km of 'impervious' substrate, yet had the highest proportional pollen and seed immigration estimates of any patch. Hence, contrary to our hypothesis, insect-mediated gene flow persisted across an urban landscape, and several of our results also parallel key findings from insect-pollinated canopy trees sampled in mixed agricultural-forest landscapes.


    Didit Okta Pribadi


    Full Text Available Agarwood is an important forest product due to its high economic value. However, the natural population of agarwood species has been decreasing rapidly because of over exploitation, therefore the international trade of the most important agarwood species (i.e. Aquilaria malaccensis is restricted to just a small quota. This research was conducted in an attempt to provide basic information for the conservation of Aquilaria spp. by identifying the species spatial distribution and habitat characteristics and developing a linkage model between their abundance and habitat characteristics. Data were collected through a field survey at Kutai National Park in August 2006 with Aquilaria spp. as the target species. Data on the species localities were used to determine the species densities and the value of Distance Index of Dispersion. The ordinance levels between the target species and the surrounding other species were identified using a correspondence analysis, while the linkage model between the species abundance and habitat characteristics was established using an ordinal multinomial logit model. The results showed that Aquilaria spp. had a low density (0.01/ha and were spatially distributed in a clump pattern. The abundance of Aquilaria species had a close association with soil texture, humidity and acidity, land elevation, air temperature and humidity, and light intensity. The abundance decreased with increasing the proportion of sandy clay loam content, soil humidity and acidity, land elevation, and light intensity. In contrast, the abundance increased with increasing sandy loam content, air temperature and air humidity. The existence of A. malaccensis was likely to associate with the existence of Goniothalamus sp., Macaranga sp., Vordia splendidissima, Lygopodium sp., and Stachyphrynium borneensis.


    Maman Turjaman


    Full Text Available Gaharu wood stand has an important source of profits to the forest community in South and Southeast Asia tropical forest countries, but Aquilaria species have reduced in number and turn out to be endangered due to overexploitation.   Today,   the planting stocks of   Aquilaria species are not sufficient to sustain the yield of gaharu wood and promote forest conservation.  The objective of this study was to determine   the effect of   five arbuscular mycorrhizal (AM fungi: Entrophospora sp., Gigaspora decipiens, Glomus clarum, Glomus sp. ZEA, and Glomus sp. ACA, on the early growth of  Aquilaria malaccensis and A. crasna under greenhouse conditions. The seedlings of  Aquilaria spp. were inoculated with Entrophospora sp., Gi. decipiens, Glomus clarum, Glomus sp. ZEA, Glomus sp. ACA and uninoculated (control under greenhouse conditions. Then, percentage AM colonization, plant growth, survival rate and nitrogen (N and phosphorus (P content and mycorrhizal dependence (MD were measured. The percentage AM colonization of A. malaccensis and A. crasna ranged from 83 to 97% and from 63 to 78%, respectively. Colonization by five AM fungi increased plant height, diameter, and shoot and root dry weights. N and P content of  the seedlings were also increased by AM colonization. Survival rates were higher in the AM-colonized seedlings at 180 days after transplantation than those in the control seedlings. The MD of Aquilaria species was higher than 55 %. The results suggested that AM fungi can be inoculated`to Aquilaria species under nursery conditions to obtain vigorous seedlings, and the field experiment is underway to clarify the role of AM fungi under field conditions.

  5. Origin and higher-level diversification of acariform mites - evidence from nuclear ribosomal genes, extensive taxon sampling, and secondary structure alignment.

    Pepato, A R; Klimov, P B


    Acariformes is the most species-rich and morphologically diverse radiation of chelicerate arthropods, known from the oldest terrestrial ecosystems. It is also a key lineage in understanding the evolution of this group, with the most vexing question whether mites, or Acari (Parasitiformes and Acariformes) is monophyletic. Previous molecular studies recovered Acari either as monophyletic or non-monophyletic, albeit with a limited taxon sampling. Similarly, relationships between basal acariform groups (include little-known, deep-soil 'endeostigmatan' mites) and major lineages of Acariformes (Sarcoptiformes, Prostigmata) are virtually unknown. We infer phylogeny of chelicerate arthropods, using a large and representative dataset, comprising all main in- and outgroups (228 taxa). Basal diversity of Acariformes is particularly well sampled. With this dataset, we conduct a series of phylogenetically explicit tests of chelicerate and acariform relationships and present a phylogenetic framework for internal relationships of acariform mites. Our molecular data strongly support a diphyletic Acari, with Acariformes as the sister group to Solifugae (PP =1.0; BP = 100), the so called Poecilophysidea. Among Acariformes, some representatives of the basal group Endeostigmata (mainly deep-soil mites) were recovered as sister-groups to the remaining Acariformes (i. e., Trombidiformes + and most of Sarcoptiformes). Desmonomatan oribatid mites (soil and litter mites) were recovered as the monophyletic sister group of Astigmata (e. g., stored product mites, house dust mites, mange mites, feather and fur mites). Trombidiformes (Sphaerolichida + Prostigmata) is strongly supported (PP =1.0; BP = 98-100). Labidostommatina was inferred as the basal lineage of Prostigmata. Eleutherengona (e. g., spider mites) and Parasitengona (e. g., chiggers, fresh water mites) were recovered as monophyletic. By contrast, Eupodina (e. g., snout mites and relatives) was not. Marine mites (Halacaridae) were

  6. Ectoparasites of the black-chinned siskin Spinus barbatus (Passeriformes: Fringillidae in Chile

    Danny Fuentes-Castillo

    Full Text Available Abstract Despite being a bird with a broad and extensive distribution in Chile, the black-chinned siskin, Spinus barbatus Molina, 1782 is not well studied in relation to its parasites. This paper aims to describe the ectoparasite fauna of S. barbatus in central and southern Chile. A total of 125 individuals caught with mist nets were examined alive; a total of 22 parasites were found dead and were exposed to parasit autopsy. The extracted parasites were preserved in 70% alcohol for subsequent mounting and identification. Ectoparasites were found in 56 black-chinned siskins (38%; 48 of them (33% had 870 mites – 680 feather mites (Astigmata: Analgoidea were identified as Proctophyllodes spini, 167 as Knemidokoptes jamaicensis, 19 as Strelkoviacarus critesi, and one as Analges passerinus. Moreover, three mites were chiggers belonging to the tribe Schoengastiini (Prostigmata: Trombiculidae. In 21 birds (14%, 54 lice were found, 21 of which were identified as Philopterus roehreri, 18 as Myrsidea serini, and 15 as Ricinus carolynae. Endoparasites were not found in the necropsied individuals. All of the parasites that were found represent new records for Chile, and they also serve as new records of host–parasite associations for S. barbatus.

  7. Cycling and effects of 36Cl labeled DDT on soil invertebrates

    Dindal, Daniel L.


    DDT, radiolabeled with /sup 36/Cl (total activity of 10.2 mc) and applied in the field at the rate of 1.12 kg/ha, cannot be detected within decomposer microarthropods using liquid scintillation spectrometry. Soil microarthropods exhibit both positive and negative responses to direct and indirect effects of DDT. Faunal simplification (decreased diversity) resulting from pesticide application as reported by many others does not apply to the oribatid and prostigmatid mites of the old field. New colonization is possible by some species of Acari as a result of DDT application. Soil microbial respiration is enhanced by a single DDT application of 1 kg/ha. No apparent relationships exist between the increased microbial respiration and soil microarthropod population dynamics in this DDT treated old field. No apparent relationships exist between soil pH, moisture levels, texture and soil microarthropod population dynamics. Microarthropod community structure (species diversity and richness, interspecific relationships and similarity) are definitely affected by a single application of DDT. The Prostigmata are the most numerous mites in the soil of an old field in central Ohio. Vertebrate predators feeding on terrestrial snails may be subjected to magnified concentrations of DDT residues. Coprophagic decomposer organisms feeding on snail feces will be subject to much larger DDT concentrations. Terrestrial snails represented by Cepaea and Otala are not killed by acute oral doses of DDT. Within a three year period after a single application of DDT no effects on the soil faunal populations were seen below 3 cm of soil.

  8. Kemampuan Tumbuhan Terna dalam Menekan Potensi Inokulum Rigidoporus microporus

    Sika Yulianti


    Full Text Available White root disease caused by Rigidoporus microporus is an important disease of rubber tree and is very difficult to control. The ability of some herbaceous plant species to suppress inoculum potential and infection of R. microporus was studied in a pot trial.  Nine species of herbaceous plants were examined, i.e. arrowroot (Marantha arundinacea, java curcumin (Curcuma xanthorrhiza, sansevieria (Sansevieria fasciata, Mallaca galangal (Alpinia malaccensis, greater galangal (Alpinia galanga, Indian shot (Canna indica, curcumin (Curcuma longa, wild taro (Colocasia esculenta, and water yam (Dioscorea alata. Pathogen’s inocula as mycelial colonizing rubber wood sticks were buried for 90 days in soil planted with tested plants. The results showed that formation of R. microporus rhizomorph in the soil was lower in pots planted with arrowroot, java cucurmin, sansevieria, Indian shot, and wild taro.  All herbaceous plants, except sansevieria, caused suppression of inoculum viability and rhizomorph development.  Further observation showed no colonization of rhizomorph nor necrosis of the root was found, except on Mallaca galangal and sansevieria.

  9. 1-Butyl-3-Methylimidazolium Chloride Pretreatment on Malaysia Lignocellulose Wastes

    Lee, L.P.; Nur Hasyareeda Hassan; Muhammad Rahimi Yusop


    Ionic liquids (ILs) are of great interest as potential solvents for the production of fuels from lignocellulose biomass which is a potential source of bio fuels. To study the effects of pretreatment, 1-butyl-3-methylimidazolium chloride ([B mim]Cl) was used to pretreat woody plants, kempas (Koompassia malaccensis) and jelutong (Dyera costulata), and non-woody plants, kenaf (Hibiscus cannabinus) and rice husk (Oryza sativa) at 120 degree Celsius for 24 h. Cellulose was regenerated by the addition of water. The cell wall composition and structure of the lignocellulose bio masses before and after the ILs pretreatment were observed and characterized using field emission scanning electron microscopy (FESEM), attenuated total reflectance fourier transform infrared (ATR FT-IR) spectroscopy, and X-ray diffraction (XRD). After the pretreatment, enzymatic hydrolysis was carried out to identify the total reducing sugars (TRS) yields using dinitrosalicylic acid (DNS) method. Regenerated lignocellulose bio masses resulted in high TRS yields compared to their counter-parts which are in agreement with the findings of FESEM, ATR FT-IR and XRD that exhibited regenerated cellulose were less crystalline and more amorphous upon IL pretreatment. Therefore, kempas and jelutong can be alternate sources for the bio fuels production. (author)

  10. α-Mangostin Improves Glucose Uptake and Inhibits Adipocytes Differentiation in 3T3-L1 Cells via PPARγ, GLUT4, and Leptin Expressions

    Muhammad Taher


    Full Text Available Obesity has been often associated with the occurrence of cardiovascular diseases, type 2 diabetes, and cancer. The development of obesity is also accompanied by significant differentiation of preadipocytes into adipocytes. In this study, we investigated the activity of α-mangostin, a major xanthone component isolated from the stem bark of G. malaccensis, on glucose uptake and adipocyte differentiation of 3T3-L1 cells focusing on PPARγ, GLUT4, and leptin expressions. α-Mangostin was found to inhibit cytoplasmic lipid accumulation and adipogenic differentiation. Cells treated with 50 μM of α-mangostin reduced intracellular fat accumulation dose-dependently up to 44.4% relative to MDI-treated cells. Analyses of 2-deoxy-D-[3H] glucose uptake activity showed that α-mangostin significantly improved the glucose uptake (P<0.05 with highest activity found at 25 μM. In addition, α-mangostin increased the amount of free fatty acids (FFA released. The highest glycerol release level was observed at 50 μM of α-mangostin. qRT-PCR analysis showed reduced lipid accumulation via inhibition of PPARγ gene expression. Induction of glucose uptake and free fatty acid release by α-mangostin were accompanied by increasing mRNA expression of GLUT4 and leptin. These evidences propose that α-mangostin might be possible candidate for the effective management of obesity in future.

  11. Desenvolvimento in vitro de plântulas de diplóides de bananeira obtidas a partir de cultura de embriões



    Full Text Available Este trabalho teve por objetivo avaliar o desenvolvimento in vitro de plântulas de progênies de oito genótipos de bananeira obtidos a partir de cultura de embriões. Os genótipos foram as espécies selvagens Calcutta e Malaccensis (Musa acuminata-AA, Butuhan e França (M. balbisiana-BB e os híbridos 0304-02, 1304-06, 4252-04 e 9379-09 (M. acuminata-AA. Os embriões foram extraídos de forma asséptica, sendo introduzidos em meio de cultura MS com 30 g L-1 agar, inicialmente em placas de Petri (40 dias e depois em tubos de ensaio (45 dias. Verificou-se efeito do genótipo no desenvolvimento in vitro dos embriões. As progênies dos genótipos selvagens do grupo BB, seguidos das progênies dos híbridos AA apresentaram maior desenvolvimento para as variáveis estudadas. O protocolo utilizado foi adequado para a cultura de embriões das progênies dos oito genótipos, devendo, no entanto, o período de desenvolvimento in vitro ser reduzido para 30 dias a fim de que o enraizamento não seja muito acentuado.

  12. Seasonal variations of nitrous oxide fluxes and soil denitrification rates in subtropical freshwater and brackish tidal marshes of the Min River estuary.

    Wang, Xuming; Hu, Minjie; Ren, Hongchang; Li, Jiabing; Tong, Chuan; Musenze, Ronald S


    Estuarine tidal marshes provide favorable conditions for nitrous oxide (N 2 O) production. Saltwater intrusion caused by sea-level rise would exert complex effects on the production and emission of N 2 O in estuarine tidal marshes; however, few studies have been conducted on its effects on N 2 O emissions. Salinity gradients are a common occurrence in estuarine tidal marshes. Studies on production and emission of N 2 O in tidal marshes with different salinities may elucidate the impact of saltwater intrusion on the emission of greenhouse gases. This study explores the seasonal variations of N 2 O fluxes and soil denitrification rates in freshwater (Daoqingzhou wetland) and brackish (Shanyutan wetland) tidal marshes dominated by Cyperus malaccensis var. brevifolius (shichito matgrass) in the Min River estuary, southeastern China. N 2 O fluxes in both marshes showed strong temporal variability. The highest N 2 O fluxes were observed in the hot and wet summer months, whereas the lowest fluxes were observed in the cold winter and autumn months. N 2 O fluxes from the freshwater marsh (48.81±9.01μgm -2 h -1 ) were significantly higher (ptidal wetlands and exert a negative feedback on the climate system. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. Biotic stress protein markers of Aquilaria sp. for gaharu species identification in Malaysia

    Azhar Mohamad; Abdul Rahim Harun


    Gaharu trees (Aquilaria) is in danger of extinction in the wild due to illegal logging. Its resin (Gaharu) is used for the production of highly valued incense throughout Asia. In Aquilaria sp. systemic induction of defense genes in response to mechanical wounding in nature is regulated by an 18-amino-acid peptide signal protein called systemin. This protein is produced in response to the natural stress at the vicinity of the wound and is also influenced by its genetic background. As the protein can be differentiated by its locality, the protein expressed is also found to be significantly different which, in turn, can be used for identification of this plant species. In this work, A. malaccensis and A. hirta were evaluated based on the targeted genes related to systemin. Targeted gene refers to specific sequence in genomic DNA. Sequence mining from public databases is part of the crucial process in getting the specific genes. The sequences will go through alignment step to identify conserved region prior to primer design. The primers were used in Polymerase Chain Reaction (PCR) techniques to amplify the conserved regions. It was found that both samples can be differentiated. This would be useful for plant breeders, trader and planter in ensuring authentic planting materials. This paper will describe the use of targeted genes primers as markers in identifying the Aquilaria species. (author)

  14. Ecological risk and pollution history of heavy metals in Nansha mangrove, South China.

    Wu, Qihang; Tam, Nora F Y; Leung, Jonathan Y S; Zhou, Xizhen; Fu, Jie; Yao, Bo; Huang, Xuexia; Xia, Lihua


    Owing to the Industrial Revolution in the late 1970s, heavy metal pollution has been regarded as a serious threat to mangrove ecosystems in the region of the Pearl River Estuary, potentially affecting human health. The present study attempted to characterize the ecological risk of heavy metals (Cd, Cr, Cu, Mn, Ni, Pb and Zn) in Nansha mangrove, South China, by estimating their concentrations in the surface sediment. In addition, the pollution history of heavy metals was examined by determining the concentrations of heavy metals along the depth gradient. The phytoremediation potential of heavy metals by the dominant plants in Nansha mangrove, namely Sonneratia apetala and Cyperus malaccensis, was also studied. Results found that the surface sediment was severely contaminated with heavy metals, probably due to the discharge of industrial sewage into the Pearl River Estuary. Spatial variation of heavy metals was generally unobvious. The ecological risk of heavy metals was very high, largely due to Cd contamination. All heavy metals, except Mn, decreased with depth, indicating that heavy metal pollution has been deteriorating since 1979. Worse still, the dominant plants in Nansha mangrove had limited capability to remove the heavy metals from sediment. Therefore, we propose that immediate actions, such as regulation of discharge standards of industrial sewage, should be taken by the authorities concerned to mitigate the ecological risk posed by heavy metals. Copyright © 2014 Elsevier Inc. All rights reserved.

  15. Mites as selective fungal carriers in stored grain habitats.

    Hubert, Jan; Stejskal, Václav; Kubátová, Alena; Munzbergová, Zuzana; Vánová, Marie; Zd'árková, Eva


    Mites are well documented as vectors of micromycetes in stored products. Since their vectoring capacity is low due to their small size, they can be serious vectors only where there is selective transfer of a high load of specific fungal species. Therefore the aim of our work was to find out whether the transfer of fungi is selective. Four kinds of stored seeds (wheat, poppy, lettuce, mustard) infested by storage mites were subjected to mycological analysis. We compared the spectrum of micromycete species isolated from different species of mites (Acarus siro, Lepidoglyphus destructor, Tyrophagus putrescentiae, Caloglyphus rhizoglyphoides and Cheyletus malaccensis) and various kinds of stored seeds. Fungi were separately isolated from (a) the surface of mites, (b) the mites' digestive tract (= faeces), and (c) stored seeds and were then cultivated and determined. The fungal transport via mites is selective. This conclusion is supported by (i) lower numbers of isolated fungal species from mites than from seeds; (ii) lower Shannon-Weaver diversity index in the fungal communities isolated from mites than from seeds; (iii) significant effect of mites/seeds as environmental variables on fungal presence in a redundancy analysis (RDA); (iv) differences in composition of isolated fungi between mite species shown by RDA. The results of our work support the hypothesis that mite-fungal interactions are dependent on mite species. The fungi attractive to mites seem to be dispersed more than others. The selectivity of fungal transport via mites enhances their pest importance.

  16. Evidence for a Higher Number of Species of Odontotermes (Isoptera) than Currently Known from Peninsular Malaysia from Mitochondrial DNA Phylogenies

    Cheng, Shawn; Kirton, Laurence G.; Panandam, Jothi M.; Siraj, Siti S.; Ng, Kevin Kit-Siong; Tan, Soon-Guan


    Termites of the genus Odontotermes are important decomposers in the Old World tropics and are sometimes important pests of crops, timber and trees. The species within the genus often have overlapping size ranges and are difficult to differentiate based on morphology. As a result, the taxonomy of Odontotermes in Peninsular Malaysia has not been adequately worked out. In this study, we examined the phylogeny of 40 samples of Odontotermes from Peninsular Malaysia using two mitochondrial DNA regions, that is, the 16S ribosomal RNA and cytochrome oxidase subunit I genes, to aid in elucidating the number of species in the peninsula. Phylogenies were reconstructed from the individual gene and combined gene data sets using parsimony and likelihood criteria. The phylogenies supported the presence of up to eleven species in Peninsular Malaysia, which were identified as O. escherichi, O. hainanensis, O. javanicus, O. longignathus, O. malaccensis, O. oblongatus, O. paraoblongatus, O. sarawakensis, and three possibly new species. Additionally, some of our taxa are thought to comprise a complex of two or more species. The number of species found in this study using DNA methods was more than the initial nine species thought to occur in Peninsular Malaysia. The support values for the clades and morphology of the soldiers provided further evidence for the existence of eleven or more species. Higher resolution genetic markers such as microsatellites would be required to confirm the presence of cryptic species in some taxa. PMID:21687629

  17. Water, Rather than Temperature, Dominantly Impacts How Soil Fauna Affect Dissolved Carbon and Nitrogen Release from Fresh Litter during Early Litter Decomposition

    Shu Liao


    Full Text Available Longstanding observations suggest that dissolved materials are lost from fresh litter through leaching, but the role of soil fauna in controlling this process has been poorly documented. In this study, a litterbag experiment employing litterbags with different mesh sizes (3 mm to permit soil fauna access and 0.04 mm to exclude fauna access was conducted in three habitats (arid valley, ecotone and subalpine forest with changes in climate and vegetation types to evaluate the effects of soil fauna on the concentrations of dissolved organic carbon (DOC and total dissolved nitrogen (TDN during the first year of decomposition. The results showed that the individual density and community abundance of soil fauna greatly varied among these habitats, but Prostigmata, Isotomidae and Oribatida were the dominant soil invertebrates. At the end of the experiment, the mass remaining of foliar litter ranged from 58% for shrub litter to 77% for birch litter, and the DOC and TDN concentrations decreased to 54%–85% and increased to 34%–269%, respectively, when soil fauna were not present. The effects of soil fauna on the concentrations of both DOC and TDN in foliar litter were greater in the subalpine forest (wetter but colder during the winter and in the arid valley (warmer but drier during the growing season, and this effect was positively correlated with water content. Moreover, the effects of fauna on DOC and TDN concentrations were greater for high-quality litter and were related to the C/N ratio. These results suggest that water, rather than temperature, dominates how fauna affect the release of dissolved substances from fresh litter.

  18. Response Surface Optimization of Rotenone Using Natural Alcohol-Based Deep Eutectic Solvent as Additive in the Extraction Medium Cocktail

    Zetty Shafiqa Othman


    Full Text Available Rotenone is a biopesticide with an amazing effect on aquatic life and insect pests. In Asia, it can be isolated from Derris species roots (Derris elliptica and Derris malaccensis. The previous study revealed the comparable efficiency of alcohol-based deep eutectic solvent (DES in extracting a high yield of rotenone (isoflavonoid to binary ionic liquid solvent system ([BMIM]OTf and organic solvent (acetone. Therefore, this study intends to analyze the optimum parameters (solvent ratio, extraction time, and agitation rate in extracting the highest yield of rotenone extract at a much lower cost and in a more environmental friendly method by using response surface methodology (RSM based on central composite rotatable design (CCRD. By using RSM, linear polynomial equations were obtained for predicting the concentration and yield of rotenone extracted. The verification experiment confirmed the validity of both of the predicted models. The results revealed that the optimum conditions for solvent ratio, extraction time, and agitation rate were 2 : 8 (DES : acetonitrile, 19.34 hours, and 199.32 rpm, respectively. At the optimum condition of the rotenone extraction process using DES binary solvent system, this resulted in a 3.5-fold increase in a rotenone concentration of 0.49 ± 0.07 mg/ml and yield of 0.35 ± 0.06 (%, w/w as compared to the control extract (acetonitrile only. In fact, the rotenone concentration and yield were significantly influenced by binary solvent ratio and extraction time (P<0.05 but not by means of agitation rate. For that reason, the optimal extraction condition using alcohol-based deep eutectic solvent (DES as a green additive in the extraction medium cocktail has increased the potential of enhancing the rotenone concentration and yield extracted.

  19. Mites and fungi in heavily infested stores in the Czech Republic.

    Hubert, J; Stejskal, V; Munzbergová, Z; Kubátová, A; Vánová, M; Zd'árková, E


    Toxigenic and allergen-producing fungi represent a serious hazard to human food and animal feed safety. Ninety-four fungal species were isolated from mite-infested samples of seeds taken from Czech seed stores. Fungi were isolated from the surface of four kinds of seeds (wheat, poppy, lettuce, and mustard) and from the gut and external surface of five species of mites (i.e., Acarus siro L., 1758, Caloglyphus rhizoglyphoides (Zachvatkin, 1973), Lepidoglyphus destructor (Schrank, 1781), Tyrophagus putrescentnae (Schrank, 1781) and Cheyletus malaccensis Oudemans 1903) separately. Multivariate analysis of fungi complex composition showed that the frequency of fungal was species significantly influenced by the kind of seed. Fungal frequencies differed between mites gut and exoskeleton surface and between the surfaces of mites and seeds. Three groups of fungal species were recognized: 1) mite surface-associated fungi: Penicillium brevicompactum, Alternaria alternata, and Aspergillus versicolor; 2) mite surface- and seed-associated fungi: Aspergillus niger, Penicillium crustosum, Penicillium aurantiogriseum, Penicillium chrysogenum, and Aspergillus flavus; and 3) seed-associated fungi: Cladosporium herbarum, Mucor dimorphosporus f. dimorphosporus, Botrytis cinerea, Penicillium griseofulvum, and Eurotium repens. Mite-carried species of microfungi are known to produce serious mycotoxins (e.g., aflatoxin B1, cyclopiazonic acid, sterigmatocystin, ochratoxin A, and nephrotoxic glycopeptides) as well as allergen producers (e.g., A. alternata and P. brevicompactum). Storage mites may play an important role in the spread of some medically hazardous micromycetes. In addition, these mite-fungi associations may heighten the risk of occurrence of mycotoxins in food and feed stuffs and cause mixed contamination by fungal and mite allergens.

  20. Optimization of ISSR Markers for Molecular DNA Fingerprinting in Aquilaria sp

    Azhar Mohamad; Muhammad Hanif Azhari; Siti Norhayati Ismail; Parween, K.S.A.S.


    Aquilaria sp. belongs to the Thymelaeaceae family and well distributed to Asia region. The species is a multipurpose use from root to shoot and becoming an economic important crop, which generates wide interest in understanding the genetic diversity of the species. Understanding of the effectiveness in differentiating DNA-based markers is an important step towards plant germplasm characterization and evaluation. It is becoming a prerequisite for more effective application of molecular marker techniques in breeding and mapping programs. Polymerase Chain Reaction (PCR)-based approaches are in demanding as its simplicity and requirement for only small quantities of sample genomic DNA. Inter-simple sequence repeats (ISRR) requires no prior genomic information as anchor template in producing multi-loci markers of tandem repeats for polymorphic patterns by PCR amplification which becoming a key of advantageous of ISSR primers. ISSR markers have shown rapid, simple, reproducible and inexpensive means in molecular taxonomy, conservation breeding and genetic diversity analysis. The ISSR for marker applications are essential to facilitate management, conservation and genetic improvement programs towards improvement of standard resin quality for perfume and or pharmaceutical industries. In this paper, a total of 100 ISSR primers were optimized by using Aquilaria malaccensis. Primers optimization resulted, 38 ISSR primers affirmative for the polymorphism evaluation study, which encountered both from specific and degenerate ISSR primers. Marker derived from ISSR profiling is a powerful method for identification and molecular classification of Aquilaria sp from species to accessions and further will useful in identifying any mutant lines derived from nature and/or mutagenesis activities. (author)

  1. Resgate in vitro de embriões em genótipos diplóides de bananeira

    Neves Tárcia dos Santos


    Full Text Available Este trabalho teve por objetivo avaliar a técnica de resgate de embriões de sementes de bananeira em genótipos diplóides e a influência de defeitos do embrião e do endosperma na germinação in vitro. Foram utilizados os genótipos Calcutta, Malaccensis, Butuhan, França, 0304-02, 1304-06, 4252-04 e 9379-09. De cada genótipo, 100 sementes recém-coletadas foram embebidas em água destilada, por 24 horas, e desinfestadas em solução à base de nitrato de prata e cloreto de sódio. Os embriões extraídos foram introduzidos em meio MS com 30 g L-1 desacarose e 7 g L-1 de ágar, e cultivados em câmara de crescimento, no escuro e em temperatura de 26 ± 2ºC. A germinação concentrou-se do quinto ao vigésimo dia de cultivo e apresentou uma média de 53,25% após 45 dias, independentemente do genótipo. As espécies selvagens apresentaram porcentagem média de germinação maior do que a dos genótipos híbridos. A presença de embrião e endosperma normais não foi essencial para a germinação in vitro.

  2. The complete chloroplast genome of banana (Musa acuminata, Zingiberales): insight into plastid monocotyledon evolution.

    Martin, Guillaume; Baurens, Franc-Christophe; Cardi, Céline; Aury, Jean-Marc; D'Hont, Angélique


    Banana (genus Musa) is a crop of major economic importance worldwide. It is a monocotyledonous member of the Zingiberales, a sister group of the widely studied Poales. Most cultivated bananas are natural Musa inter-(sub-)specific triploid hybrids. A Musa acuminata reference nuclear genome sequence was recently produced based on sequencing of genomic DNA enriched in nucleus. The Musa acuminata chloroplast genome was assembled with chloroplast reads extracted from whole-genome-shotgun sequence data. The Musa chloroplast genome is a circular molecule of 169,972 bp with a quadripartite structure containing two single copy regions, a Large Single Copy region (LSC, 88,338 bp) and a Small Single Copy region (SSC, 10,768 bp) separated by Inverted Repeat regions (IRs, 35,433 bp). Two forms of the chloroplast genome relative to the orientation of SSC versus LSC were found. The Musa chloroplast genome shows an extreme IR expansion at the IR/SSC boundary relative to the most common structures found in angiosperms. This expansion consists of the integration of three additional complete genes (rps15, ndhH and ycf1) and part of the ndhA gene. No such expansion has been observed in monocots so far. Simple Sequence Repeats were identified in the Musa chloroplast genome and a new set of Musa chloroplastic markers was designed. The complete sequence of M. acuminata ssp malaccensis chloroplast we reported here is the first one for the Zingiberales order. As such it provides new insight in the evolution of the chloroplast of monocotyledons. In particular, it reinforces that IR/SSC expansion has occurred independently several times within monocotyledons. The discovery of new polymorphic markers within Musa chloroplast opens new perspectives to better understand the origin of cultivated triploid bananas.

  3. The complete chloroplast genome of banana (Musa acuminata, Zingiberales: insight into plastid monocotyledon evolution.

    Guillaume Martin

    Full Text Available Banana (genus Musa is a crop of major economic importance worldwide. It is a monocotyledonous member of the Zingiberales, a sister group of the widely studied Poales. Most cultivated bananas are natural Musa inter-(sub-specific triploid hybrids. A Musa acuminata reference nuclear genome sequence was recently produced based on sequencing of genomic DNA enriched in nucleus.The Musa acuminata chloroplast genome was assembled with chloroplast reads extracted from whole-genome-shotgun sequence data. The Musa chloroplast genome is a circular molecule of 169,972 bp with a quadripartite structure containing two single copy regions, a Large Single Copy region (LSC, 88,338 bp and a Small Single Copy region (SSC, 10,768 bp separated by Inverted Repeat regions (IRs, 35,433 bp. Two forms of the chloroplast genome relative to the orientation of SSC versus LSC were found. The Musa chloroplast genome shows an extreme IR expansion at the IR/SSC boundary relative to the most common structures found in angiosperms. This expansion consists of the integration of three additional complete genes (rps15, ndhH and ycf1 and part of the ndhA gene. No such expansion has been observed in monocots so far. Simple Sequence Repeats were identified in the Musa chloroplast genome and a new set of Musa chloroplastic markers was designed.The complete sequence of M. acuminata ssp malaccensis chloroplast we reported here is the first one for the Zingiberales order. As such it provides new insight in the evolution of the chloroplast of monocotyledons. In particular, it reinforces that IR/SSC expansion has occurred independently several times within monocotyledons. The discovery of new polymorphic markers within Musa chloroplast opens new perspectives to better understand the origin of cultivated triploid bananas.


    Nining Nurfatma


    Full Text Available Harapan rainforest situated in South Sumatera is a restoration area of PT REKI company that highly susceptible to land conversion. The problem faced in the effort of restoration is the restorated area that is too large and has not been tested any silvicultural techniques. The condition of land cover is the basic information that could be used as a reference in the preparation of restoration strategy. The study aimed to determine the level of damage, the condition of the ecosystem, appropriate silvicultural techniques, and plant species restoration priorities. The used methods were analysis of vegetation in 4 typologies (secondary forest, old shrub, young shurb, former akasia plantations, and the analysis of Normalized Difference Vegetation Index (NDVI. The results showed that the correlation between density value (y and NDVI (x was: y = -136.35+425.46x, R2 (0.89. The order of  area with the level of damage from the lowest to the highest were: the typology of secondary forest, old shurb, young shrub, and former akasia plantation, respectively. The typology of secondary forests had the highest value of diversity, richness, and evenness  (H’>3, Dmg>5, and E>0.6. Relationship between former akasia plantations typology and another tipologies was not germane (euclidean distance> 3.31, and the relationship between seedling and trees in all typologies (with the exception of former akasia plantations was  very high  (r> 0.9. Silvicultural techniques that could be done include eradicating A. mangium in the former akasia plantation and planting in the all typologies with the exception of secondary forest. The plants that could be used for restoration are Macaranga sp., K.malaccensis,  Nephelium sp., P.gutta, H.mengarawan, S.leprosula.

  5. The Importance of Habitat in the Ecology of Decomposition on Rabbit Carcasses in Malaysia: Implications in Forensic Entomology.

    Silahuddin, Siti Aisyah; Latif, Baha; Kurahashi, Hiromu; Walter, David Evans; Heo, Chong Chin


    . villenuevi, C. pinguis, H. ligurriens, Hyd. spinigera, Hyd. chalcogaster, F. canicularis, and Boettcherisca highlandica Kurahashi & Tan represented by both adults and larvae, whereas C. nigripes, Chrysomya thanomthini Kurahashi & Tumrasvin, M. domestica, Atherigona sp., Parasarcophaga albiceps Meigen, P. taenionota, Sepsidae, Phoridae, and Millichidae were represented by adults only. Faunal succession followed the sequence of dominant flies, i.e., Calliphoridae, Sarcophagidae, Muscidae, Sepsidae, and lastly Stratiomyidae for jungle, or Sepsidae for rural and highland studies. Mites, from suborders Mesostigmata, Prostigmata, Astigmatina, and Oribatida, were also recovered throughout decomposition, which could be used for future implementation in forensic investigations. The data obtained from this study could provide more accurate indicators for local forensic scientists in solving criminal cases especially on the determination of time and primary location of death. © The Author 2015. Published by Oxford University Press on behalf of the Entomological Society of America.For Permissions, please e-mail:

  6. Acarofauna em plantas ornamentais

    Jania Claudia Camilo dos Santos


    Full Text Available Normal 0 21 false false false PT-BR X-NONE X-NONE O cultivo e o comercio de plantas ornamentais vem cada vez mais ganhando espaço no Brasil, pela grande variedade das espécies existentes e exuberância de suas flores, que oferecem uma maior riqueza ao local. Dessa forma, o objetivo desse trabalho foi realizar o levantamento da população de ácaros associados às plantas ornamentais no município de Arapiraca-AL, em função dos diversos problemas acarretados por essa espécie. O levantamento foi realizado entre os meses de abril a março, através de amostragens mensais de folhas coletadas da parte basal, intermediária e apical de plantas existentes em praças e jardins. Foram coletados 55 ácaros pertencentes à ordem Prostigmata em 20 famílias de plantas. As plantas com as maiores riquezas de ácaros foram as Coleus blumei L. e Bxuxus sempervirens L., que apresentaram 65% dos valores amostrais. Analisando-se as coletas realizadas, pode-se observar que houve uma maior incidência populacional de ácaros na coleta do mês de maio, cuja percentagem foi de 36% de ácaros levantados, sendo que no levantamento dos dados amostrais de março a percentagem encontrada foi de 14%, nas amostragens dos meses de abril e junho, a percentagem amostrada dos dados foi de 22 e 28%, respectivamente. O estudo do levantamento de ácaros em plantas ornamentais permitiu observar a relação entre ácaros e a relação com a planta hospedeira, facilitando posteriormente um estudo mais aprofundado sobre plantas hospedeiras, e pode-se observar que em períodos chuvosos ocorre uma menor incidência populacional.

  7. Coastal vegetation invasion increases greenhouse gas emission from wetland soils but also increases soil carbon accumulation

    Chen, Yaping; Chen, Guangcheng; Ye, Yong


    Soil properties and soil–atmosphere fluxes of CO 2 , CH 4 and N 2 O from four coastal wetlands were studied throughout the year, namely, native Kandelia obovata mangrove forest vs. exotic Sonneratia apetala mangrove forest, and native Cyperus malaccensis salt marsh vs. exotic Spartina alterniflora salt marsh. Soils of the four wetlands were all net sources of greenhouse gases while Sonneratia forest contributed the most with a total soil–atmosphere CO 2 -equivalent flux of 137.27 mg CO 2 m −2 h −1 , which is 69.23%, 99.75% and 44.56% higher than that of Kandelia, Cyperus and Spartina, respectively. The high underground biomass and distinctive root structure of Sonneratia might be responsible for its high greenhouse gas emission from the soil. Soils in Spartina marsh emitted the second largest amount of total greenhouse gases but it ranked first in emitting trace greenhouse gases. Annual average CH 4 and N 2 O fluxes from Spartina soil were 13.77 and 1.14 μmol m −2 h −1 , respectively, which are 2.08 and 1.46 times that of Kandelia, 1.03 and 1.15 times of Sonneratia, and 1.74 and 1.02 times of Cyperus, respectively. Spartina has longer growing season and higher productivity than native marshes which might increase greenhouse gas emission in cold seasons. Exotic wetland soils had higher carbon stock as compared to their respective native counterparts but their carbon stocks were offset by a larger proportion because of their higher greenhouse gas emissions. Annual total soil–atmosphere fluxes of greenhouse gases reduced soil carbon burial benefits by 8.1%, 9.5%, 6.4% and 7.2% for Kandelia, Sonneratia, Cyperus and Spartina, respectively, which narrowed down the gaps in net soil carbon stock between native and exotic wetlands. The results indicated that the invasion of exotic wetland plants might convert local coastal soils into a considerable atmospheric source of greenhouse gases although they at the same time increase soil carbon accumulation

  8. Coastal vegetation invasion increases greenhouse gas emission from wetland soils but also increases soil carbon accumulation

    Chen, Yaping [Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen 361102, Fujian (China); Chen, Guangcheng [Third Institute of Oceanography, State Oceanic Administration, Xiamen 361005, Fujian (China); Ye, Yong, E-mail: [Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen 361102, Fujian (China)


    Soil properties and soil–atmosphere fluxes of CO{sub 2}, CH{sub 4} and N{sub 2}O from four coastal wetlands were studied throughout the year, namely, native Kandelia obovata mangrove forest vs. exotic Sonneratia apetala mangrove forest, and native Cyperus malaccensis salt marsh vs. exotic Spartina alterniflora salt marsh. Soils of the four wetlands were all net sources of greenhouse gases while Sonneratia forest contributed the most with a total soil–atmosphere CO{sub 2}-equivalent flux of 137.27 mg CO{sub 2} m{sup −2} h{sup −1}, which is 69.23%, 99.75% and 44.56% higher than that of Kandelia, Cyperus and Spartina, respectively. The high underground biomass and distinctive root structure of Sonneratia might be responsible for its high greenhouse gas emission from the soil. Soils in Spartina marsh emitted the second largest amount of total greenhouse gases but it ranked first in emitting trace greenhouse gases. Annual average CH{sub 4} and N{sub 2}O fluxes from Spartina soil were 13.77 and 1.14 μmol m{sup −2} h{sup −1}, respectively, which are 2.08 and 1.46 times that of Kandelia, 1.03 and 1.15 times of Sonneratia, and 1.74 and 1.02 times of Cyperus, respectively. Spartina has longer growing season and higher productivity than native marshes which might increase greenhouse gas emission in cold seasons. Exotic wetland soils had higher carbon stock as compared to their respective native counterparts but their carbon stocks were offset by a larger proportion because of their higher greenhouse gas emissions. Annual total soil–atmosphere fluxes of greenhouse gases reduced soil carbon burial benefits by 8.1%, 9.5%, 6.4% and 7.2% for Kandelia, Sonneratia, Cyperus and Spartina, respectively, which narrowed down the gaps in net soil carbon stock between native and exotic wetlands. The results indicated that the invasion of exotic wetland plants might convert local coastal soils into a considerable atmospheric source of greenhouse gases although they at the

  9. Methane mitigation potential of phyto-sources from Northeast India and their effect on rumen fermentation characteristics and protozoa in vitro

    Luna Baruah


    Full Text Available Aim: The aim of the study was to explore the anti-methanogenic potential of phyto-sources from Northeast region of the country and assess the effect on rumen fermentation characteristics and protozoa for their likely inclusion in animal diet to reduce methane emission. Materials and Methods: Twenty phyto-sources were collected from Northeast state, Assam, during March to April 2014. Phyto-sources were analyzed for their tannin content followed by screening for methane mitigation potential using in vitro system. The effect of tannin on methane production and other fermentation parameters was confirmed by attenuating the effect of tannin with polyethylene glycol (PEG-6000 addition. About 200 mg dried phyto-source samples were incubated for 24 h in vitro, and volume of gas produced was recorded. The gas sample was analyzed on gas chromatograph for the proportion of methane in the sample. The effect of phyto-sources on rumen fermentation characteristics and protozoal population was determined using standard methodologies. Results: Results from studies demonstrated that Litchi chinensis, Melastoma malabathricum, Lagerstroemia speciosa, Terminalia chebula, and Syzygium cumini produced comparatively less methane, while Christella parasitica, Leucas linifolia, Citrus grandis, and Aquilaria malaccensis produced relatively more methane during in vitro incubation. An increase (p<0.05 in gas and methane production from the phyto-sources was observed when incubated with PEG-6000. Entodinimorphs were prominent ciliates irrespective of the phyto-sources, while holotrichs represented only small fraction of protozoa. An increase (p<0.05 in total protozoa, entodinimorphs, and holotrichs was noted when PEG-6000 added to the basal substrate. Our study confirmed variable impact of phyto-sources on total volatile fatty acid production and ammonia-N. Conclusion: It may be concluded that L. chinensis, M. malabathricum, L. speciosa, S. cumini, and T. chebula are having