WorldWideScience

Sample records for machine learning-based methods

  1. BEBP: An Poisoning Method Against Machine Learning Based IDSs

    OpenAIRE

    Li, Pan; Liu, Qiang; Zhao, Wentao; Wang, Dongxu; Wang, Siqi

    2018-01-01

    In big data era, machine learning is one of fundamental techniques in intrusion detection systems (IDSs). However, practical IDSs generally update their decision module by feeding new data then retraining learning models in a periodical way. Hence, some attacks that comprise the data for training or testing classifiers significantly challenge the detecting capability of machine learning-based IDSs. Poisoning attack, which is one of the most recognized security threats towards machine learning...

  2. Improved method for SNR prediction in machine-learning-based test

    NARCIS (Netherlands)

    Sheng, Xiaoqin; Kerkhoff, Hans G.

    2010-01-01

    This paper applies an improved method for testing the signal-to-noise ratio (SNR) of Analogue-to-Digital Converters (ADC). In previous work, a noisy and nonlinear pulse signal is exploited as the input stimulus to obtain the signature results of ADC. By applying a machine-learning-based approach,

  3. Machine learning-based methods for prediction of linear B-cell epitopes.

    Science.gov (United States)

    Wang, Hsin-Wei; Pai, Tun-Wen

    2014-01-01

    B-cell epitope prediction facilitates immunologists in designing peptide-based vaccine, diagnostic test, disease prevention, treatment, and antibody production. In comparison with T-cell epitope prediction, the performance of variable length B-cell epitope prediction is still yet to be satisfied. Fortunately, due to increasingly available verified epitope databases, bioinformaticians could adopt machine learning-based algorithms on all curated data to design an improved prediction tool for biomedical researchers. Here, we have reviewed related epitope prediction papers, especially those for linear B-cell epitope prediction. It should be noticed that a combination of selected propensity scales and statistics of epitope residues with machine learning-based tools formulated a general way for constructing linear B-cell epitope prediction systems. It is also observed from most of the comparison results that the kernel method of support vector machine (SVM) classifier outperformed other machine learning-based approaches. Hence, in this chapter, except reviewing recently published papers, we have introduced the fundamentals of B-cell epitope and SVM techniques. In addition, an example of linear B-cell prediction system based on physicochemical features and amino acid combinations is illustrated in details.

  4. A multi-label learning based kernel automatic recommendation method for support vector machine.

    Science.gov (United States)

    Zhang, Xueying; Song, Qinbao

    2015-01-01

    Choosing an appropriate kernel is very important and critical when classifying a new problem with Support Vector Machine. So far, more attention has been paid on constructing new kernels and choosing suitable parameter values for a specific kernel function, but less on kernel selection. Furthermore, most of current kernel selection methods focus on seeking a best kernel with the highest classification accuracy via cross-validation, they are time consuming and ignore the differences among the number of support vectors and the CPU time of SVM with different kernels. Considering the tradeoff between classification success ratio and CPU time, there may be multiple kernel functions performing equally well on the same classification problem. Aiming to automatically select those appropriate kernel functions for a given data set, we propose a multi-label learning based kernel recommendation method built on the data characteristics. For each data set, the meta-knowledge data base is first created by extracting the feature vector of data characteristics and identifying the corresponding applicable kernel set. Then the kernel recommendation model is constructed on the generated meta-knowledge data base with the multi-label classification method. Finally, the appropriate kernel functions are recommended to a new data set by the recommendation model according to the characteristics of the new data set. Extensive experiments over 132 UCI benchmark data sets, with five different types of data set characteristics, eleven typical kernels (Linear, Polynomial, Radial Basis Function, Sigmoidal function, Laplace, Multiquadric, Rational Quadratic, Spherical, Spline, Wave and Circular), and five multi-label classification methods demonstrate that, compared with the existing kernel selection methods and the most widely used RBF kernel function, SVM with the kernel function recommended by our proposed method achieved the highest classification performance.

  5. A Study of Applications of Machine Learning Based Classification Methods for Virtual Screening of Lead Molecules.

    Science.gov (United States)

    Vyas, Renu; Bapat, Sanket; Jain, Esha; Tambe, Sanjeev S; Karthikeyan, Muthukumarasamy; Kulkarni, Bhaskar D

    2015-01-01

    The ligand-based virtual screening of combinatorial libraries employs a number of statistical modeling and machine learning methods. A comprehensive analysis of the application of these methods for the diversity oriented virtual screening of biological targets/drug classes is presented here. A number of classification models have been built using three types of inputs namely structure based descriptors, molecular fingerprints and therapeutic category for performing virtual screening. The activity and affinity descriptors of a set of inhibitors of four target classes DHFR, COX, LOX and NMDA have been utilized to train a total of six classifiers viz. Artificial Neural Network (ANN), k nearest neighbor (k-NN), Support Vector Machine (SVM), Naïve Bayes (NB), Decision Tree--(DT) and Random Forest--(RF). Among these classifiers, the ANN was found as the best classifier with an AUC of 0.9 irrespective of the target. New molecular fingerprints based on pharmacophore, toxicophore and chemophore (PTC), were used to build the ANN models for each dataset. A good accuracy of 87.27% was obtained using 296 chemophoric binary fingerprints for the COX-LOX inhibitors compared to pharmacophoric (67.82%) and toxicophoric (70.64%). The methodology was validated on the classical Ames mutagenecity dataset of 4337 molecules. To evaluate it further, selectivity and promiscuity of molecules from five drug classes viz. anti-anginal, anti-convulsant, anti-depressant, anti-arrhythmic and anti-diabetic were studied. The TPC fingerprints computed for each category were able to capture the drug-class specific features using the k-NN classifier. These models can be useful for selecting optimal molecules for drug design.

  6. Machine Learning Based Malware Detection

    Science.gov (United States)

    2015-05-18

    methods for invoking OS functionality while bypassing the API [10], and it is not clear whether the discriminative power of API calls or imports alone... Firefox , QuickTime, Microsoft Office, Python, Java, VLC, etc. [17], [18]. After removing duplicates, our database contained 42,003 benign files, for a

  7. Machine learning based analysis of cardiovascular images

    NARCIS (Netherlands)

    Wolterink, JM

    2017-01-01

    Cardiovascular diseases (CVDs), including coronary artery disease (CAD) and congenital heart disease (CHD) are the global leading cause of death. Computed tomography (CT) and magnetic resonance imaging (MRI) allow non-invasive imaging of cardiovascular structures. This thesis presents machine

  8. Machine Learning Based Diagnosis of Lithium Batteries

    Science.gov (United States)

    Ibe-Ekeocha, Chinemerem Christopher

    The depletion of the world's current petroleum reserve, coupled with the negative effects of carbon monoxide and other harmful petrochemical by-products on the environment, is the driving force behind the movement towards renewable and sustainable energy sources. Furthermore, the growing transportation sector consumes a significant portion of the total energy used in the United States. A complete electrification of this sector would require a significant development in electric vehicles (EVs) and hybrid electric vehicles (HEVs), thus translating to a reduction in the carbon footprint. As the market for EVs and HEVs grows, their battery management systems (BMS) need to be improved accordingly. The BMS is not only responsible for optimally charging and discharging the battery, but also monitoring battery's state of charge (SOC) and state of health (SOH). SOC, similar to an energy gauge, is a representation of a battery's remaining charge level as a percentage of its total possible charge at full capacity. Similarly, SOH is a measure of deterioration of a battery; thus it is a representation of the battery's age. Both SOC and SOH are not measurable, so it is important that these quantities are estimated accurately. An inaccurate estimation could not only be inconvenient for EV consumers, but also potentially detrimental to battery's performance and life. Such estimations could be implemented either online, while battery is in use, or offline when battery is at rest. This thesis presents intelligent online SOC and SOH estimation methods using machine learning tools such as artificial neural network (ANN). ANNs are a powerful generalization tool if programmed and trained effectively. Unlike other estimation strategies, the techniques used require no battery modeling or knowledge of battery internal parameters but rather uses battery's voltage, charge/discharge current, and ambient temperature measurements to accurately estimate battery's SOC and SOH. The developed

  9. A Machine Learning Based Intrusion Impact Analysis Scheme for Clouds

    Directory of Open Access Journals (Sweden)

    Junaid Arshad

    2012-01-01

    Full Text Available Clouds represent a major paradigm shift, inspiring the contemporary approach to computing. They present fascinating opportunities to address dynamic user requirements with the provision of on demand expandable computing infrastructures. However, Clouds introduce novel security challenges which need to be addressed to facilitate widespread adoption. This paper is focused on one such challenge - intrusion impact analysis. In particular, we highlight the significance of intrusion impact analysis for the overall security of Clouds. Additionally, we present a machine learning based scheme to address this challenge in accordance with the specific requirements of Clouds for intrusion impact analysis. We also present rigorous evaluation performed to assess the effectiveness and feasibility of the proposed method to address this challenge for Clouds. The evaluation results demonstrate high degree of effectiveness to correctly determine the impact of an intrusion along with significant reduction with respect to the intrusion response time.

  10. Machine Learning Based Classifier for Falsehood Detection

    Science.gov (United States)

    Mallikarjun, H. M.; Manimegalai, P., Dr.; Suresh, H. N., Dr.

    2017-08-01

    The investigation of physiological techniques for Falsehood identification tests utilizing the enthusiastic aggravations started as a part of mid 1900s. The need of Falsehood recognition has been a piece of our general public from hundreds of years back. Different requirements drifted over the general public raising the need to create trick evidence philosophies for Falsehood identification. The established similar addressing tests have been having a tendency to gather uncertain results against which new hearty strategies are being explored upon for acquiring more productive Falsehood discovery set up. Electroencephalography (EEG) is a non-obtrusive strategy to quantify the action of mind through the anodes appended to the scalp of a subject. Electroencephalogram is a record of the electric signs produced by the synchronous activity of mind cells over a timeframe. The fundamental goal is to accumulate and distinguish the important information through this action which can be acclimatized for giving surmising to Falsehood discovery in future analysis. This work proposes a strategy for Falsehood discovery utilizing EEG database recorded on irregular people of various age gatherings and social organizations. The factual investigation is directed utilizing MATLAB v-14. It is a superior dialect for specialized registering which spares a considerable measure of time with streamlined investigation systems. In this work center is made on Falsehood Classification by Support Vector Machine (SVM). 72 Samples are set up by making inquiries from standard poll with a Wright and wrong replies in a diverse era from the individual in wearable head unit. 52 samples are trained and 20 are tested. By utilizing Bluetooth based Neurosky’s Mindwave kit, brain waves are recorded and qualities are arranged appropriately. In this work confusion matrix is derived by matlab programs and accuracy of 56.25 % is achieved.

  11. Medical subdomain classification of clinical notes using a machine learning-based natural language processing approach

    OpenAIRE

    Weng, Wei-Hung; Wagholikar, Kavishwar B.; McCray, Alexa T.; Szolovits, Peter; Chueh, Henry C.

    2017-01-01

    Background The medical subdomain of a clinical note, such as cardiology or neurology, is useful content-derived metadata for developing machine learning downstream applications. To classify the medical subdomain of a note accurately, we have constructed a machine learning-based natural language processing (NLP) pipeline and developed medical subdomain classifiers based on the content of the note. Methods We constructed the pipeline using the clinical ...

  12. PredPsych: A toolbox for predictive machine learning based approach in experimental psychology research

    OpenAIRE

    Cavallo, Andrea; Becchio, Cristina; Koul, Atesh

    2016-01-01

    Recent years have seen an increased interest in machine learning based predictive methods for analysing quantitative behavioural data in experimental psychology. While these methods can achieve relatively greater sensitivity compared to conventional univariate techniques, they still lack an established and accessible software framework. The goal of this work was to build an open-source toolbox – “PredPsych” – that could make these methods readily available to all psychologists. PredPsych is a...

  13. Machine learning-based dual-energy CT parametric mapping.

    Science.gov (United States)

    Su, Kuan-Hao; Kuo, Jung-Wen; Jordan, David W; Van Hedent, Steven; Klahr, Paul; Wei, Zhouping; Al Helo, Rose; Liang, Fan; Qian, Pengjiang; Pereira, Gisele C; Rassouli, Negin; Gilkeson, Robert C; Traughber, Bryan J; Cheng, Chee-Wai; Muzic, Raymond F

    2018-05-22

    The aim is to develop and evaluate machine learning methods for generating quantitative parametric maps of effective atomic number (Zeff), relative electron density (ρe), mean excitation energy (Ix), and relative stopping power (RSP) from clinical dual-energy CT data. The maps could be used for material identification and radiation dose calculation. Machine learning methods of historical centroid (HC), random forest (RF), and artificial neural networks (ANN) were used to learn the relationship between dual-energy CT input data and ideal output parametric maps calculated for phantoms from the known compositions of 13 tissue substitutes. After training and model selection steps, the machine learning predictors were used to generate parametric maps from independent phantom and patient input data. Precision and accuracy were evaluated using the ideal maps. This process was repeated for a range of exposure doses, and performance was compared to that of the clinically-used dual-energy, physics-based method which served as the reference. The machine learning methods generated more accurate and precise parametric maps than those obtained using the reference method. Their performance advantage was particularly evident when using data from the lowest exposure, one-fifth of a typical clinical abdomen CT acquisition. The RF method achieved the greatest accuracy. In comparison, the ANN method was only 1% less accurate but had much better computational efficiency than RF, being able to produce parametric maps in 15 seconds. Machine learning methods outperformed the reference method in terms of accuracy and noise tolerance when generating parametric maps, encouraging further exploration of the techniques. Among the methods we evaluated, ANN is the most suitable for clinical use due to its combination of accuracy, excellent low-noise performance, and computational efficiency. . © 2018 Institute of Physics and Engineering in

  14. Probabilistic and machine learning-based retrieval approaches for biomedical dataset retrieval

    Science.gov (United States)

    Karisani, Payam; Qin, Zhaohui S; Agichtein, Eugene

    2018-01-01

    Abstract The bioCADDIE dataset retrieval challenge brought together different approaches to retrieval of biomedical datasets relevant to a user’s query, expressed as a text description of a needed dataset. We describe experiments in applying a data-driven, machine learning-based approach to biomedical dataset retrieval as part of this challenge. We report on a series of experiments carried out to evaluate the performance of both probabilistic and machine learning-driven techniques from information retrieval, as applied to this challenge. Our experiments with probabilistic information retrieval methods, such as query term weight optimization, automatic query expansion and simulated user relevance feedback, demonstrate that automatically boosting the weights of important keywords in a verbose query is more effective than other methods. We also show that although there is a rich space of potential representations and features available in this domain, machine learning-based re-ranking models are not able to improve on probabilistic information retrieval techniques with the currently available training data. The models and algorithms presented in this paper can serve as a viable implementation of a search engine to provide access to biomedical datasets. The retrieval performance is expected to be further improved by using additional training data that is created by expert annotation, or gathered through usage logs, clicks and other processes during natural operation of the system. Database URL: https://github.com/emory-irlab/biocaddie

  15. METAPHOR: Probability density estimation for machine learning based photometric redshifts

    Science.gov (United States)

    Amaro, V.; Cavuoti, S.; Brescia, M.; Vellucci, C.; Tortora, C.; Longo, G.

    2017-06-01

    We present METAPHOR (Machine-learning Estimation Tool for Accurate PHOtometric Redshifts), a method able to provide a reliable PDF for photometric galaxy redshifts estimated through empirical techniques. METAPHOR is a modular workflow, mainly based on the MLPQNA neural network as internal engine to derive photometric galaxy redshifts, but giving the possibility to easily replace MLPQNA with any other method to predict photo-z's and their PDF. We present here the results about a validation test of the workflow on the galaxies from SDSS-DR9, showing also the universality of the method by replacing MLPQNA with KNN and Random Forest models. The validation test include also a comparison with the PDF's derived from a traditional SED template fitting method (Le Phare).

  16. Empirical Studies On Machine Learning Based Text Classification Algorithms

    OpenAIRE

    Shweta C. Dharmadhikari; Maya Ingle; Parag Kulkarni

    2011-01-01

    Automatic classification of text documents has become an important research issue now days. Properclassification of text documents requires information retrieval, machine learning and Natural languageprocessing (NLP) techniques. Our aim is to focus on important approaches to automatic textclassification based on machine learning techniques viz. supervised, unsupervised and semi supervised.In this paper we present a review of various text classification approaches under machine learningparadig...

  17. Accelerated Monte Carlo system reliability analysis through machine-learning-based surrogate models of network connectivity

    International Nuclear Information System (INIS)

    Stern, R.E.; Song, J.; Work, D.B.

    2017-01-01

    The two-terminal reliability problem in system reliability analysis is known to be computationally intractable for large infrastructure graphs. Monte Carlo techniques can estimate the probability of a disconnection between two points in a network by selecting a representative sample of network component failure realizations and determining the source-terminal connectivity of each realization. To reduce the runtime required for the Monte Carlo approximation, this article proposes an approximate framework in which the connectivity check of each sample is estimated using a machine-learning-based classifier. The framework is implemented using both a support vector machine (SVM) and a logistic regression based surrogate model. Numerical experiments are performed on the California gas distribution network using the epicenter and magnitude of the 1989 Loma Prieta earthquake as well as randomly-generated earthquakes. It is shown that the SVM and logistic regression surrogate models are able to predict network connectivity with accuracies of 99% for both methods, and are 1–2 orders of magnitude faster than using a Monte Carlo method with an exact connectivity check. - Highlights: • Surrogate models of network connectivity are developed by machine-learning algorithms. • Developed surrogate models can reduce the runtime required for Monte Carlo simulations. • Support vector machine and logistic regressions are employed to develop surrogate models. • Numerical example of California gas distribution network demonstrate the proposed approach. • The developed models have accuracies 99%, and are 1–2 orders of magnitude faster than MCS.

  18. Machine Learning Based Localization and Classification with Atomic Magnetometers

    Science.gov (United States)

    Deans, Cameron; Griffin, Lewis D.; Marmugi, Luca; Renzoni, Ferruccio

    2018-01-01

    We demonstrate identification of position, material, orientation, and shape of objects imaged by a Rb 85 atomic magnetometer performing electromagnetic induction imaging supported by machine learning. Machine learning maximizes the information extracted from the images created by the magnetometer, demonstrating the use of hidden data. Localization 2.6 times better than the spatial resolution of the imaging system and successful classification up to 97% are obtained. This circumvents the need of solving the inverse problem and demonstrates the extension of machine learning to diffusive systems, such as low-frequency electrodynamics in media. Automated collection of task-relevant information from quantum-based electromagnetic imaging will have a relevant impact from biomedicine to security.

  19. PredPsych: A toolbox for predictive machine learning-based approach in experimental psychology research.

    Science.gov (United States)

    Koul, Atesh; Becchio, Cristina; Cavallo, Andrea

    2017-12-12

    Recent years have seen an increased interest in machine learning-based predictive methods for analyzing quantitative behavioral data in experimental psychology. While these methods can achieve relatively greater sensitivity compared to conventional univariate techniques, they still lack an established and accessible implementation. The aim of current work was to build an open-source R toolbox - "PredPsych" - that could make these methods readily available to all psychologists. PredPsych is a user-friendly, R toolbox based on machine-learning predictive algorithms. In this paper, we present the framework of PredPsych via the analysis of a recently published multiple-subject motion capture dataset. In addition, we discuss examples of possible research questions that can be addressed with the machine-learning algorithms implemented in PredPsych and cannot be easily addressed with univariate statistical analysis. We anticipate that PredPsych will be of use to researchers with limited programming experience not only in the field of psychology, but also in that of clinical neuroscience, enabling computational assessment of putative bio-behavioral markers for both prognosis and diagnosis.

  20. Thutmose - Investigation of Machine Learning-Based Intrusion Detection Systems

    Science.gov (United States)

    2016-06-01

    monitoring. This analyzed payload is within the application layer of the OSI model . The analysis tries to establish whether or not the payload is...24 3.2.5 Model Drift Experiments...ADVERSARIAL ENVIRONMENTS (SPIE DSS 2014) .................................................. 58 APPENDIX C - EVALUATING MODEL DRIFT IN MACHINE LEARNING

  1. The influence of negative training set size on machine learning-based virtual screening.

    Science.gov (United States)

    Kurczab, Rafał; Smusz, Sabina; Bojarski, Andrzej J

    2014-01-01

    The paper presents a thorough analysis of the influence of the number of negative training examples on the performance of machine learning methods. The impact of this rather neglected aspect of machine learning methods application was examined for sets containing a fixed number of positive and a varying number of negative examples randomly selected from the ZINC database. An increase in the ratio of positive to negative training instances was found to greatly influence most of the investigated evaluating parameters of ML methods in simulated virtual screening experiments. In a majority of cases, substantial increases in precision and MCC were observed in conjunction with some decreases in hit recall. The analysis of dynamics of those variations let us recommend an optimal composition of training data. The study was performed on several protein targets, 5 machine learning algorithms (SMO, Naïve Bayes, Ibk, J48 and Random Forest) and 2 types of molecular fingerprints (MACCS and CDK FP). The most effective classification was provided by the combination of CDK FP with SMO or Random Forest algorithms. The Naïve Bayes models appeared to be hardly sensitive to changes in the number of negative instances in the training set. In conclusion, the ratio of positive to negative training instances should be taken into account during the preparation of machine learning experiments, as it might significantly influence the performance of particular classifier. What is more, the optimization of negative training set size can be applied as a boosting-like approach in machine learning-based virtual screening.

  2. Machine learning based Intelligent cognitive network using fog computing

    Science.gov (United States)

    Lu, Jingyang; Li, Lun; Chen, Genshe; Shen, Dan; Pham, Khanh; Blasch, Erik

    2017-05-01

    In this paper, a Cognitive Radio Network (CRN) based on artificial intelligence is proposed to distribute the limited radio spectrum resources more efficiently. The CRN framework can analyze the time-sensitive signal data close to the signal source using fog computing with different types of machine learning techniques. Depending on the computational capabilities of the fog nodes, different features and machine learning techniques are chosen to optimize spectrum allocation. Also, the computing nodes send the periodic signal summary which is much smaller than the original signal to the cloud so that the overall system spectrum source allocation strategies are dynamically updated. Applying fog computing, the system is more adaptive to the local environment and robust to spectrum changes. As most of the signal data is processed at the fog level, it further strengthens the system security by reducing the communication burden of the communications network.

  3. Exploring machine-learning-based control plane intrusion detection techniques in software defined optical networks

    Science.gov (United States)

    Zhang, Huibin; Wang, Yuqiao; Chen, Haoran; Zhao, Yongli; Zhang, Jie

    2017-12-01

    In software defined optical networks (SDON), the centralized control plane may encounter numerous intrusion threatens which compromise the security level of provisioned services. In this paper, the issue of control plane security is studied and two machine-learning-based control plane intrusion detection techniques are proposed for SDON with properly selected features such as bandwidth, route length, etc. We validate the feasibility and efficiency of the proposed techniques by simulations. Results show an accuracy of 83% for intrusion detection can be achieved with the proposed machine-learning-based control plane intrusion detection techniques.

  4. A Machine Learning Based Analytical Framework for Semantic Annotation Requirements

    OpenAIRE

    Hamed Hassanzadeh; MohammadReza Keyvanpour

    2011-01-01

    The Semantic Web is an extension of the current web in which information is given well-defined meaning. The perspective of Semantic Web is to promote the quality and intelligence of the current web by changing its contents into machine understandable form. Therefore, semantic level information is one of the cornerstones of the Semantic Web. The process of adding semantic metadata to web resources is called Semantic Annotation. There are many obstacles against the Semantic Annotation, such as ...

  5. Machine Learning-based Intelligent Formal Reasoning and Proving System

    Science.gov (United States)

    Chen, Shengqing; Huang, Xiaojian; Fang, Jiaze; Liang, Jia

    2018-03-01

    The reasoning system can be used in many fields. How to improve reasoning efficiency is the core of the design of system. Through the formal description of formal proof and the regular matching algorithm, after introducing the machine learning algorithm, the system of intelligent formal reasoning and verification has high efficiency. The experimental results show that the system can verify the correctness of propositional logic reasoning and reuse the propositional logical reasoning results, so as to obtain the implicit knowledge in the knowledge base and provide the basic reasoning model for the construction of intelligent system.

  6. Machine-Learning-Based No Show Prediction in Outpatient Visits

    Directory of Open Access Journals (Sweden)

    Carlos Elvira

    2018-03-01

    Full Text Available A recurring problem in healthcare is the high percentage of patients who miss their appointment, be it a consultation or a hospital test. The present study seeks patient’s behavioural patterns that allow predicting the probability of no- shows. We explore the convenience of using Big Data Machine Learning models to accomplish this task. To begin with, a predictive model based only on variables associated with the target appointment is built. Then the model is improved by considering the patient’s history of appointments. In both cases, the Gradient Boosting algorithm was the predictor of choice. Our numerical results are considered promising given the small amount of information available. However, there seems to be plenty of room to improve the model if we manage to collect additional data for both patients and appointments.

  7. Machine learning based switching model for electricity load forecasting

    Energy Technology Data Exchange (ETDEWEB)

    Fan, Shu; Lee, Wei-Jen [Energy Systems Research Center, The University of Texas at Arlington, 416 S. College Street, Arlington, TX 76019 (United States); Chen, Luonan [Department of Electronics, Information and Communication Engineering, Osaka Sangyo University, 3-1-1 Nakagaito, Daito, Osaka 574-0013 (Japan)

    2008-06-15

    In deregulated power markets, forecasting electricity loads is one of the most essential tasks for system planning, operation and decision making. Based on an integration of two machine learning techniques: Bayesian clustering by dynamics (BCD) and support vector regression (SVR), this paper proposes a novel forecasting model for day ahead electricity load forecasting. The proposed model adopts an integrated architecture to handle the non-stationarity of time series. Firstly, a BCD classifier is applied to cluster the input data set into several subsets by the dynamics of the time series in an unsupervised manner. Then, groups of SVRs are used to fit the training data of each subset in a supervised way. The effectiveness of the proposed model is demonstrated with actual data taken from the New York ISO and the Western Farmers Electric Cooperative in Oklahoma. (author)

  8. Machine learning based switching model for electricity load forecasting

    Energy Technology Data Exchange (ETDEWEB)

    Fan Shu [Energy Systems Research Center, University of Texas at Arlington, 416 S. College Street, Arlington, TX 76019 (United States); Chen Luonan [Department of Electronics, Information and Communication Engineering, Osaka Sangyo University, 3-1-1 Nakagaito, Daito, Osaka 574-0013 (Japan); Lee, Weijen [Energy Systems Research Center, University of Texas at Arlington, 416 S. College Street, Arlington, TX 76019 (United States)], E-mail: wlee@uta.edu

    2008-06-15

    In deregulated power markets, forecasting electricity loads is one of the most essential tasks for system planning, operation and decision making. Based on an integration of two machine learning techniques: Bayesian clustering by dynamics (BCD) and support vector regression (SVR), this paper proposes a novel forecasting model for day ahead electricity load forecasting. The proposed model adopts an integrated architecture to handle the non-stationarity of time series. Firstly, a BCD classifier is applied to cluster the input data set into several subsets by the dynamics of the time series in an unsupervised manner. Then, groups of SVRs are used to fit the training data of each subset in a supervised way. The effectiveness of the proposed model is demonstrated with actual data taken from the New York ISO and the Western Farmers Electric Cooperative in Oklahoma.

  9. Machine learning based switching model for electricity load forecasting

    International Nuclear Information System (INIS)

    Fan Shu; Chen Luonan; Lee, Weijen

    2008-01-01

    In deregulated power markets, forecasting electricity loads is one of the most essential tasks for system planning, operation and decision making. Based on an integration of two machine learning techniques: Bayesian clustering by dynamics (BCD) and support vector regression (SVR), this paper proposes a novel forecasting model for day ahead electricity load forecasting. The proposed model adopts an integrated architecture to handle the non-stationarity of time series. Firstly, a BCD classifier is applied to cluster the input data set into several subsets by the dynamics of the time series in an unsupervised manner. Then, groups of SVRs are used to fit the training data of each subset in a supervised way. The effectiveness of the proposed model is demonstrated with actual data taken from the New York ISO and the Western Farmers Electric Cooperative in Oklahoma

  10. Machine learning based global particle indentification algorithms at LHCb experiment

    CERN Multimedia

    Derkach, Denis; Likhomanenko, Tatiana; Rogozhnikov, Aleksei; Ratnikov, Fedor

    2017-01-01

    One of the most important aspects of data processing at LHC experiments is the particle identification (PID) algorithm. In LHCb, several different sub-detector systems provide PID information: the Ring Imaging CHerenkov (RICH) detector, the hadronic and electromagnetic calorimeters, and the muon chambers. To improve charged particle identification, several neural networks including a deep architecture and gradient boosting have been applied to data. These new approaches provide higher identification efficiencies than existing implementations for all charged particle types. It is also necessary to achieve a flat dependency between efficiencies and spectator variables such as particle momentum, in order to reduce systematic uncertainties during later stages of data analysis. For this purpose, "flat” algorithms that guarantee the flatness property for efficiencies have also been developed. This talk presents this new approach based on machine learning and its performance.

  11. Towards a Standard-based Domain-specific Platform to Solve Machine Learning-based Problems

    Directory of Open Access Journals (Sweden)

    Vicente García-Díaz

    2015-12-01

    Full Text Available Machine learning is one of the most important subfields of computer science and can be used to solve a variety of interesting artificial intelligence problems. There are different languages, framework and tools to define the data needed to solve machine learning-based problems. However, there is a great number of very diverse alternatives which makes it difficult the intercommunication, portability and re-usability of the definitions, designs or algorithms that any developer may create. In this paper, we take the first step towards a language and a development environment independent of the underlying technologies, allowing developers to design solutions to solve machine learning-based problems in a simple and fast way, automatically generating code for other technologies. That can be considered a transparent bridge among current technologies. We rely on Model-Driven Engineering approach, focusing on the creation of models to abstract the definition of artifacts from the underlying technologies.

  12. Medical subdomain classification of clinical notes using a machine learning-based natural language processing approach.

    Science.gov (United States)

    Weng, Wei-Hung; Wagholikar, Kavishwar B; McCray, Alexa T; Szolovits, Peter; Chueh, Henry C

    2017-12-01

    The medical subdomain of a clinical note, such as cardiology or neurology, is useful content-derived metadata for developing machine learning downstream applications. To classify the medical subdomain of a note accurately, we have constructed a machine learning-based natural language processing (NLP) pipeline and developed medical subdomain classifiers based on the content of the note. We constructed the pipeline using the clinical NLP system, clinical Text Analysis and Knowledge Extraction System (cTAKES), the Unified Medical Language System (UMLS) Metathesaurus, Semantic Network, and learning algorithms to extract features from two datasets - clinical notes from Integrating Data for Analysis, Anonymization, and Sharing (iDASH) data repository (n = 431) and Massachusetts General Hospital (MGH) (n = 91,237), and built medical subdomain classifiers with different combinations of data representation methods and supervised learning algorithms. We evaluated the performance of classifiers and their portability across the two datasets. The convolutional recurrent neural network with neural word embeddings trained-medical subdomain classifier yielded the best performance measurement on iDASH and MGH datasets with area under receiver operating characteristic curve (AUC) of 0.975 and 0.991, and F1 scores of 0.845 and 0.870, respectively. Considering better clinical interpretability, linear support vector machine-trained medical subdomain classifier using hybrid bag-of-words and clinically relevant UMLS concepts as the feature representation, with term frequency-inverse document frequency (tf-idf)-weighting, outperformed other shallow learning classifiers on iDASH and MGH datasets with AUC of 0.957 and 0.964, and F1 scores of 0.932 and 0.934 respectively. We trained classifiers on one dataset, applied to the other dataset and yielded the threshold of F1 score of 0.7 in classifiers for half of the medical subdomains we studied. Our study shows that a supervised

  13. Detecting Abnormal Word Utterances in Children With Autism Spectrum Disorders: Machine-Learning-Based Voice Analysis Versus Speech Therapists.

    Science.gov (United States)

    Nakai, Yasushi; Takiguchi, Tetsuya; Matsui, Gakuyo; Yamaoka, Noriko; Takada, Satoshi

    2017-10-01

    Abnormal prosody is often evident in the voice intonations of individuals with autism spectrum disorders. We compared a machine-learning-based voice analysis with human hearing judgments made by 10 speech therapists for classifying children with autism spectrum disorders ( n = 30) and typical development ( n = 51). Using stimuli limited to single-word utterances, machine-learning-based voice analysis was superior to speech therapist judgments. There was a significantly higher true-positive than false-negative rate for machine-learning-based voice analysis but not for speech therapists. Results are discussed in terms of some artificiality of clinician judgments based on single-word utterances, and the objectivity machine-learning-based voice analysis adds to judging abnormal prosody.

  14. Robust Machine Learning-Based Correction on Automatic Segmentation of the Cerebellum and Brainstem.

    Science.gov (United States)

    Wang, Jun Yi; Ngo, Michael M; Hessl, David; Hagerman, Randi J; Rivera, Susan M

    2016-01-01

    Automated segmentation is a useful method for studying large brain structures such as the cerebellum and brainstem. However, automated segmentation may lead to inaccuracy and/or undesirable boundary. The goal of the present study was to investigate whether SegAdapter, a machine learning-based method, is useful for automatically correcting large segmentation errors and disagreement in anatomical definition. We further assessed the robustness of the method in handling size of training set, differences in head coil usage, and amount of brain atrophy. High resolution T1-weighted images were acquired from 30 healthy controls scanned with either an 8-channel or 32-channel head coil. Ten patients, who suffered from brain atrophy because of fragile X-associated tremor/ataxia syndrome, were scanned using the 32-channel head coil. The initial segmentations of the cerebellum and brainstem were generated automatically using Freesurfer. Subsequently, Freesurfer's segmentations were both manually corrected to serve as the gold standard and automatically corrected by SegAdapter. Using only 5 scans in the training set, spatial overlap with manual segmentation in Dice coefficient improved significantly from 0.956 (for Freesurfer segmentation) to 0.978 (for SegAdapter-corrected segmentation) for the cerebellum and from 0.821 to 0.954 for the brainstem. Reducing the training set size to 2 scans only decreased the Dice coefficient ≤0.002 for the cerebellum and ≤ 0.005 for the brainstem compared to the use of training set size of 5 scans in corrective learning. The method was also robust in handling differences between the training set and the test set in head coil usage and the amount of brain atrophy, which reduced spatial overlap only by segmentation and corrective learning provides a valuable method for accurate and efficient segmentation of the cerebellum and brainstem, particularly in large-scale neuroimaging studies, and potentially for segmenting other neural regions as

  15. Local-learning-based neuron selection for grasping gesture prediction in motor brain machine interfaces

    Science.gov (United States)

    Xu, Kai; Wang, Yiwen; Wang, Yueming; Wang, Fang; Hao, Yaoyao; Zhang, Shaomin; Zhang, Qiaosheng; Chen, Weidong; Zheng, Xiaoxiang

    2013-04-01

    Objective. The high-dimensional neural recordings bring computational challenges to movement decoding in motor brain machine interfaces (mBMI), especially for portable applications. However, not all recorded neural activities relate to the execution of a certain movement task. This paper proposes to use a local-learning-based method to perform neuron selection for the gesture prediction in a reaching and grasping task. Approach. Nonlinear neural activities are decomposed into a set of linear ones in a weighted feature space. A margin is defined to measure the distance between inter-class and intra-class neural patterns. The weights, reflecting the importance of neurons, are obtained by minimizing a margin-based exponential error function. To find the most dominant neurons in the task, 1-norm regularization is introduced to the objective function for sparse weights, where near-zero weights indicate irrelevant neurons. Main results. The signals of only 10 neurons out of 70 selected by the proposed method could achieve over 95% of the full recording's decoding accuracy of gesture predictions, no matter which different decoding methods are used (support vector machine and K-nearest neighbor). The temporal activities of the selected neurons show visually distinguishable patterns associated with various hand states. Compared with other algorithms, the proposed method can better eliminate the irrelevant neurons with near-zero weights and provides the important neuron subset with the best decoding performance in statistics. The weights of important neurons converge usually within 10-20 iterations. In addition, we study the temporal and spatial variation of neuron importance along a period of one and a half months in the same task. A high decoding performance can be maintained by updating the neuron subset. Significance. The proposed algorithm effectively ascertains the neuronal importance without assuming any coding model and provides a high performance with different

  16. A deep learning-based multi-model ensemble method for cancer prediction.

    Science.gov (United States)

    Xiao, Yawen; Wu, Jun; Lin, Zongli; Zhao, Xiaodong

    2018-01-01

    Cancer is a complex worldwide health problem associated with high mortality. With the rapid development of the high-throughput sequencing technology and the application of various machine learning methods that have emerged in recent years, progress in cancer prediction has been increasingly made based on gene expression, providing insight into effective and accurate treatment decision making. Thus, developing machine learning methods, which can successfully distinguish cancer patients from healthy persons, is of great current interest. However, among the classification methods applied to cancer prediction so far, no one method outperforms all the others. In this paper, we demonstrate a new strategy, which applies deep learning to an ensemble approach that incorporates multiple different machine learning models. We supply informative gene data selected by differential gene expression analysis to five different classification models. Then, a deep learning method is employed to ensemble the outputs of the five classifiers. The proposed deep learning-based multi-model ensemble method was tested on three public RNA-seq data sets of three kinds of cancers, Lung Adenocarcinoma, Stomach Adenocarcinoma and Breast Invasive Carcinoma. The test results indicate that it increases the prediction accuracy of cancer for all the tested RNA-seq data sets as compared to using a single classifier or the majority voting algorithm. By taking full advantage of different classifiers, the proposed deep learning-based multi-model ensemble method is shown to be accurate and effective for cancer prediction. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. Robust Machine Learning-Based Correction on Automatic Segmentation of the Cerebellum and Brainstem.

    Directory of Open Access Journals (Sweden)

    Jun Yi Wang

    Full Text Available Automated segmentation is a useful method for studying large brain structures such as the cerebellum and brainstem. However, automated segmentation may lead to inaccuracy and/or undesirable boundary. The goal of the present study was to investigate whether SegAdapter, a machine learning-based method, is useful for automatically correcting large segmentation errors and disagreement in anatomical definition. We further assessed the robustness of the method in handling size of training set, differences in head coil usage, and amount of brain atrophy. High resolution T1-weighted images were acquired from 30 healthy controls scanned with either an 8-channel or 32-channel head coil. Ten patients, who suffered from brain atrophy because of fragile X-associated tremor/ataxia syndrome, were scanned using the 32-channel head coil. The initial segmentations of the cerebellum and brainstem were generated automatically using Freesurfer. Subsequently, Freesurfer's segmentations were both manually corrected to serve as the gold standard and automatically corrected by SegAdapter. Using only 5 scans in the training set, spatial overlap with manual segmentation in Dice coefficient improved significantly from 0.956 (for Freesurfer segmentation to 0.978 (for SegAdapter-corrected segmentation for the cerebellum and from 0.821 to 0.954 for the brainstem. Reducing the training set size to 2 scans only decreased the Dice coefficient ≤0.002 for the cerebellum and ≤ 0.005 for the brainstem compared to the use of training set size of 5 scans in corrective learning. The method was also robust in handling differences between the training set and the test set in head coil usage and the amount of brain atrophy, which reduced spatial overlap only by <0.01. These results suggest that the combination of automated segmentation and corrective learning provides a valuable method for accurate and efficient segmentation of the cerebellum and brainstem, particularly in large

  18. Machine learning-based kinetic modeling: a robust and reproducible solution for quantitative analysis of dynamic PET data.

    Science.gov (United States)

    Pan, Leyun; Cheng, Caixia; Haberkorn, Uwe; Dimitrakopoulou-Strauss, Antonia

    2017-05-07

    A variety of compartment models are used for the quantitative analysis of dynamic positron emission tomography (PET) data. Traditionally, these models use an iterative fitting (IF) method to find the least squares between the measured and calculated values over time, which may encounter some problems such as the overfitting of model parameters and a lack of reproducibility, especially when handling noisy data or error data. In this paper, a machine learning (ML) based kinetic modeling method is introduced, which can fully utilize a historical reference database to build a moderate kinetic model directly dealing with noisy data but not trying to smooth the noise in the image. Also, due to the database, the presented method is capable of automatically adjusting the models using a multi-thread grid parameter searching technique. Furthermore, a candidate competition concept is proposed to combine the advantages of the ML and IF modeling methods, which could find a balance between fitting to historical data and to the unseen target curve. The machine learning based method provides a robust and reproducible solution that is user-independent for VOI-based and pixel-wise quantitative analysis of dynamic PET data.

  19. Machine learning-based kinetic modeling: a robust and reproducible solution for quantitative analysis of dynamic PET data

    Science.gov (United States)

    Pan, Leyun; Cheng, Caixia; Haberkorn, Uwe; Dimitrakopoulou-Strauss, Antonia

    2017-05-01

    A variety of compartment models are used for the quantitative analysis of dynamic positron emission tomography (PET) data. Traditionally, these models use an iterative fitting (IF) method to find the least squares between the measured and calculated values over time, which may encounter some problems such as the overfitting of model parameters and a lack of reproducibility, especially when handling noisy data or error data. In this paper, a machine learning (ML) based kinetic modeling method is introduced, which can fully utilize a historical reference database to build a moderate kinetic model directly dealing with noisy data but not trying to smooth the noise in the image. Also, due to the database, the presented method is capable of automatically adjusting the models using a multi-thread grid parameter searching technique. Furthermore, a candidate competition concept is proposed to combine the advantages of the ML and IF modeling methods, which could find a balance between fitting to historical data and to the unseen target curve. The machine learning based method provides a robust and reproducible solution that is user-independent for VOI-based and pixel-wise quantitative analysis of dynamic PET data.

  20. Machine learning-based prediction of adverse drug effects: An example of seizure-inducing compounds

    Directory of Open Access Journals (Sweden)

    Mengxuan Gao

    2017-02-01

    Full Text Available Various biological factors have been implicated in convulsive seizures, involving side effects of drugs. For the preclinical safety assessment of drug development, it is difficult to predict seizure-inducing side effects. Here, we introduced a machine learning-based in vitro system designed to detect seizure-inducing side effects. We recorded local field potentials from the CA1 alveus in acute mouse neocortico-hippocampal slices, while 14 drugs were bath-perfused at 5 different concentrations each. For each experimental condition, we collected seizure-like neuronal activity and merged their waveforms as one graphic image, which was further converted into a feature vector using Caffe, an open framework for deep learning. In the space of the first two principal components, the support vector machine completely separated the vectors (i.e., doses of individual drugs that induced seizure-like events and identified diphenhydramine, enoxacin, strychnine and theophylline as “seizure-inducing” drugs, which indeed were reported to induce seizures in clinical situations. Thus, this artificial intelligence-based classification may provide a new platform to detect the seizure-inducing side effects of preclinical drugs.

  1. Machine Learning Based Single-Frame Super-Resolution Processing for Lensless Blood Cell Counting

    Directory of Open Access Journals (Sweden)

    Xiwei Huang

    2016-11-01

    Full Text Available A lensless blood cell counting system integrating microfluidic channel and a complementary metal oxide semiconductor (CMOS image sensor is a promising technique to miniaturize the conventional optical lens based imaging system for point-of-care testing (POCT. However, such a system has limited resolution, making it imperative to improve resolution from the system-level using super-resolution (SR processing. Yet, how to improve resolution towards better cell detection and recognition with low cost of processing resources and without degrading system throughput is still a challenge. In this article, two machine learning based single-frame SR processing types are proposed and compared for lensless blood cell counting, namely the Extreme Learning Machine based SR (ELMSR and Convolutional Neural Network based SR (CNNSR. Moreover, lensless blood cell counting prototypes using commercial CMOS image sensors and custom designed backside-illuminated CMOS image sensors are demonstrated with ELMSR and CNNSR. When one captured low-resolution lensless cell image is input, an improved high-resolution cell image will be output. The experimental results show that the cell resolution is improved by 4×, and CNNSR has 9.5% improvement over the ELMSR on resolution enhancing performance. The cell counting results also match well with a commercial flow cytometer. Such ELMSR and CNNSR therefore have the potential for efficient resolution improvement in lensless blood cell counting systems towards POCT applications.

  2. A Machine Learning-based Rainfall System for GPM Dual-frequency Radar

    Science.gov (United States)

    Tan, H.; Chandrasekar, V.; Chen, H.

    2017-12-01

    Precipitation measurement produced by the Global Precipitation Measurement (GPM) Dual-frequency Precipitation Radar (DPR) plays an important role in researching the water circle and forecasting extreme weather event. Compare with its predecessor - Tropical Rainfall Measuring Mission (TRMM) Precipitation Radar (PR), GRM DPR measures precipitation in two different frequencies (i.e., Ku and Ka band), which can provide detailed information on the microphysical properties of precipitation particles, quantify particle size distribution and quantitatively measure light rain and falling snow. This paper presents a novel Machine Learning system for ground-based and space borne radar rainfall estimation. The system first trains ground radar data for rainfall estimation using rainfall measurements from gauges and subsequently uses the ground radar based rainfall estimates to train GPM DPR data in order to get space based rainfall product. Therein, data alignment between space DPR and ground radar is conducted using the methodology proposed by Bolen and Chandrasekar (2013), which can minimize the effects of potential geometric distortion of GPM DPR observations. For demonstration purposes, rainfall measurements from three rain gauge networks near Melbourne, Florida, are used for training and validation purposes. These three gauge networks, which are located in Kennedy Space Center (KSC), South Florida Water Management District (SFL), and St. Johns Water Management District (STJ), include 33, 46, and 99 rain gauge stations, respectively. Collocated ground radar observations from the National Weather Service (NWS) Weather Surveillance Radar - 1988 Doppler (WSR-88D) in Melbourne (i.e., KMLB radar) are trained with the gauge measurements. The trained model is then used to derive KMLB radar based rainfall product, which is used to train GPM DPR data collected from coincident overpasses events. The machine learning based rainfall product is compared against the GPM standard products

  3. Machine learning based analytics of micro-MRI trabecular bone microarchitecture and texture in type 1 Gaucher disease.

    Science.gov (United States)

    Sharma, Gulshan B; Robertson, Douglas D; Laney, Dawn A; Gambello, Michael J; Terk, Michael

    2016-06-14

    Type 1 Gaucher disease (GD) is an autosomal recessive lysosomal storage disease, affecting bone metabolism, structure and strength. Current bone assessment methods are not ideal. Semi-quantitative MRI scoring is unreliable, not standardized, and only evaluates bone marrow. DXA BMD is also used but is a limited predictor of bone fragility/fracture risk. Our purpose was to measure trabecular bone microarchitecture, as a biomarker of bone disease severity, in type 1 GD individuals with different GD genotypes and to apply machine learning based analytics to discriminate between GD patients and healthy individuals. Micro-MR imaging of the distal radius was performed on 20 type 1 GD patients and 10 healthy controls (HC). Fifteen stereological and textural measures (STM) were calculated from the MR images. General linear models demonstrated significant differences between GD and HC, and GD genotypes. Stereological measures, main contributors to the first two principal components (PCs), explained ~50% of data variation and were significantly different between males and females. Subsequent PCs textural measures were significantly different between GD patients and HC individuals. Textural measures also significantly differed between GD genotypes, and distinguished between GD patients with normal and pathologic DXA scores. PCA and SVM predictive analyses discriminated between GD and HC with maximum accuracy of 73% and area under ROC curve of 0.79. Trabecular STM differences can be quantified between GD patients and HC, and GD sub-types using micro-MRI and machine learning based analytics. Work is underway to expand this approach to evaluate GD disease burden and treatment efficacy. Copyright © 2016 Elsevier Ltd. All rights reserved.

  4. Machine Learning Based Classification of Microsatellite Variation: An Effective Approach for Phylogeographic Characterization of Olive Populations.

    Science.gov (United States)

    Torkzaban, Bahareh; Kayvanjoo, Amir Hossein; Ardalan, Arman; Mousavi, Soraya; Mariotti, Roberto; Baldoni, Luciana; Ebrahimie, Esmaeil; Ebrahimi, Mansour; Hosseini-Mazinani, Mehdi

    2015-01-01

    Finding efficient analytical techniques is overwhelmingly turning into a bottleneck for the effectiveness of large biological data. Machine learning offers a novel and powerful tool to advance classification and modeling solutions in molecular biology. However, these methods have been less frequently used with empirical population genetics data. In this study, we developed a new combined approach of data analysis using microsatellite marker data from our previous studies of olive populations using machine learning algorithms. Herein, 267 olive accessions of various origins including 21 reference cultivars, 132 local ecotypes, and 37 wild olive specimens from the Iranian plateau, together with 77 of the most represented Mediterranean varieties were investigated using a finely selected panel of 11 microsatellite markers. We organized data in two '4-targeted' and '16-targeted' experiments. A strategy of assaying different machine based analyses (i.e. data cleaning, feature selection, and machine learning classification) was devised to identify the most informative loci and the most diagnostic alleles to represent the population and the geography of each olive accession. These analyses revealed microsatellite markers with the highest differentiating capacity and proved efficiency for our method of clustering olive accessions to reflect upon their regions of origin. A distinguished highlight of this study was the discovery of the best combination of markers for better differentiating of populations via machine learning models, which can be exploited to distinguish among other biological populations.

  5. Machine learning-based quantitative texture analysis of CT images of small renal masses: Differentiation of angiomyolipoma without visible fat from renal cell carcinoma.

    Science.gov (United States)

    Feng, Zhichao; Rong, Pengfei; Cao, Peng; Zhou, Qingyu; Zhu, Wenwei; Yan, Zhimin; Liu, Qianyun; Wang, Wei

    2018-04-01

    To evaluate the diagnostic performance of machine-learning based quantitative texture analysis of CT images to differentiate small (≤ 4 cm) angiomyolipoma without visible fat (AMLwvf) from renal cell carcinoma (RCC). This single-institutional retrospective study included 58 patients with pathologically proven small renal mass (17 in AMLwvf and 41 in RCC groups). Texture features were extracted from the largest possible tumorous regions of interest (ROIs) by manual segmentation in preoperative three-phase CT images. Interobserver reliability and the Mann-Whitney U test were applied to select features preliminarily. Then support vector machine with recursive feature elimination (SVM-RFE) and synthetic minority oversampling technique (SMOTE) were adopted to establish discriminative classifiers, and the performance of classifiers was assessed. Of the 42 extracted features, 16 candidate features showed significant intergroup differences (P Machine learning analysis of CT texture features can facilitate the accurate differentiation of small AMLwvf from RCC. • Although conventional CT is useful for diagnosis of SRMs, it has limitations. • Machine-learning based CT texture analysis facilitate differentiation of small AMLwvf from RCC. • The highest accuracy of SVM-RFE+SMOTE classifier reached 93.9 %. • Texture analysis combined with machine-learning methods might spare unnecessary surgery for AMLwvf.

  6. A Comparison Study of Machine Learning Based Algorithms for Fatigue Crack Growth Calculation.

    Science.gov (United States)

    Wang, Hongxun; Zhang, Weifang; Sun, Fuqiang; Zhang, Wei

    2017-05-18

    The relationships between the fatigue crack growth rate ( d a / d N ) and stress intensity factor range ( Δ K ) are not always linear even in the Paris region. The stress ratio effects on fatigue crack growth rate are diverse in different materials. However, most existing fatigue crack growth models cannot handle these nonlinearities appropriately. The machine learning method provides a flexible approach to the modeling of fatigue crack growth because of its excellent nonlinear approximation and multivariable learning ability. In this paper, a fatigue crack growth calculation method is proposed based on three different machine learning algorithms (MLAs): extreme learning machine (ELM), radial basis function network (RBFN) and genetic algorithms optimized back propagation network (GABP). The MLA based method is validated using testing data of different materials. The three MLAs are compared with each other as well as the classical two-parameter model ( K * approach). The results show that the predictions of MLAs are superior to those of K * approach in accuracy and effectiveness, and the ELM based algorithms show overall the best agreement with the experimental data out of the three MLAs, for its global optimization and extrapolation ability.

  7. Novel Machine Learning-Based Techniques for Efficient Resource Allocation in Next Generation Wireless Networks

    KAUST Repository

    AlQuerm, Ismail A.

    2018-02-21

    resources management in diverse wireless networks. The core operation of the proposed architecture is decision-making for resource allocation and system’s parameters adaptation. Thus, we develop the decision-making mechanism using different artificial intelligence techniques, evaluate the performance achieved and determine the tradeoff of using one technique over the others. The techniques include decision-trees, genetic algorithm, hybrid engine based on decision-trees and case based reasoning, and supervised engine with machine learning contribution to determine the ultimate technique that suits the current environment conditions. All the proposed techniques are evaluated using testbed implementation in different topologies and scenarios. LTE networks have been considered as a potential environment for demonstration of our proposed cognitive based resource allocation techniques as they lack of radio resource management. In addition, we explore the use of enhanced online learning to perform efficient resource allocation in the upcoming 5G networks to maximize energy efficiency and data rate. The considered 5G structures are heterogeneous multi-tier networks with device to device communication and heterogeneous cloud radio access networks. We propose power and resource blocks allocation schemes to maximize energy efficiency and data rate in heterogeneous 5G networks. Moreover, traffic offloading from large cells to small cells in 5G heterogeneous networks is investigated and an online learning based traffic offloading strategy is developed to enhance energy efficiency. Energy efficiency problem in heterogeneous cloud radio access networks is tackled using online learning in centralized and distributed fashions. The proposed online learning comprises improvement features that reduce the algorithms complexities and enhance the performance achieved.

  8. A Learning-Based Steganalytic Method against LSB Matching Steganography

    Directory of Open Access Journals (Sweden)

    Z. Xia

    2011-04-01

    Full Text Available This paper considers the detection of spatial domain least significant bit (LSB matching steganography in gray images. Natural images hold some inherent properties, such as histogram, dependence between neighboring pixels, and dependence among pixels that are not adjacent to each other. These properties are likely to be disturbed by LSB matching. Firstly, histogram will become smoother after LSB matching. Secondly, the two kinds of dependence will be weakened by the message embedding. Accordingly, three features, which are respectively based on image histogram, neighborhood degree histogram and run-length histogram, are extracted at first. Then, support vector machine is utilized to learn and discriminate the difference of features between cover and stego images. Experimental results prove that the proposed method possesses reliable detection ability and outperforms the two previous state-of-the-art methods. Further more, the conclusions are drawn by analyzing the individual performance of three features and their fused feature.

  9. The influence of the negative-positive ratio and screening database size on the performance of machine learning-based virtual screening.

    Science.gov (United States)

    Kurczab, Rafał; Bojarski, Andrzej J

    2017-01-01

    The machine learning-based virtual screening of molecular databases is a commonly used approach to identify hits. However, many aspects associated with training predictive models can influence the final performance and, consequently, the number of hits found. Thus, we performed a systematic study of the simultaneous influence of the proportion of negatives to positives in the testing set, the size of screening databases and the type of molecular representations on the effectiveness of classification. The results obtained for eight protein targets, five machine learning algorithms (SMO, Naïve Bayes, Ibk, J48 and Random Forest), two types of molecular fingerprints (MACCS and CDK FP) and eight screening databases with different numbers of molecules confirmed our previous findings that increases in the ratio of negative to positive training instances greatly influenced most of the investigated parameters of the ML methods in simulated virtual screening experiments. However, the performance of screening was shown to also be highly dependent on the molecular library dimension. Generally, with the increasing size of the screened database, the optimal training ratio also increased, and this ratio can be rationalized using the proposed cost-effectiveness threshold approach. To increase the performance of machine learning-based virtual screening, the training set should be constructed in a way that considers the size of the screening database.

  10. Support vector machine learning-based fMRI data group analysis.

    Science.gov (United States)

    Wang, Ze; Childress, Anna R; Wang, Jiongjiong; Detre, John A

    2007-07-15

    To explore the multivariate nature of fMRI data and to consider the inter-subject brain response discrepancies, a multivariate and brain response model-free method is fundamentally required. Two such methods are presented in this paper by integrating a machine learning algorithm, the support vector machine (SVM), and the random effect model. Without any brain response modeling, SVM was used to extract a whole brain spatial discriminance map (SDM), representing the brain response difference between the contrasted experimental conditions. Population inference was then obtained through the random effect analysis (RFX) or permutation testing (PMU) on the individual subjects' SDMs. Applied to arterial spin labeling (ASL) perfusion fMRI data, SDM RFX yielded lower false-positive rates in the null hypothesis test and higher detection sensitivity for synthetic activations with varying cluster size and activation strengths, compared to the univariate general linear model (GLM)-based RFX. For a sensory-motor ASL fMRI study, both SDM RFX and SDM PMU yielded similar activation patterns to GLM RFX and GLM PMU, respectively, but with higher t values and cluster extensions at the same significance level. Capitalizing on the absence of temporal noise correlation in ASL data, this study also incorporated PMU in the individual-level GLM and SVM analyses accompanied by group-level analysis through RFX or group-level PMU. Providing inferences on the probability of being activated or deactivated at each voxel, these individual-level PMU-based group analysis methods can be used to threshold the analysis results of GLM RFX, SDM RFX or SDM PMU.

  11. Developing a Blended Learning-Based Method for Problem-Solving in Capability Learning

    Science.gov (United States)

    Dwiyogo, Wasis D.

    2018-01-01

    The main objectives of the study were to develop and investigate the implementation of blended learning based method for problem-solving. Three experts were involved in the study and all three had stated that the model was ready to be applied in the classroom. The implementation of the blended learning-based design for problem-solving was…

  12. Machine Learning-based Virtual Screening and Its Applications to Alzheimer's Drug Discovery: A Review.

    Science.gov (United States)

    Carpenter, Kristy A; Huang, Xudong

    2018-06-07

    Virtual Screening (VS) has emerged as an important tool in the drug development process, as it conducts efficient in silico searches over millions of compounds, ultimately increasing yields of potential drug leads. As a subset of Artificial Intelligence (AI), Machine Learning (ML) is a powerful way of conducting VS for drug leads. ML for VS generally involves assembling a filtered training set of compounds, comprised of known actives and inactives. After training the model, it is validated and, if sufficiently accurate, used on previously unseen databases to screen for novel compounds with desired drug target binding activity. The study aims to review ML-based methods used for VS and applications to Alzheimer's disease (AD) drug discovery. To update the current knowledge on ML for VS, we review thorough backgrounds, explanations, and VS applications of the following ML techniques: Naïve Bayes (NB), k-Nearest Neighbors (kNN), Support Vector Machines (SVM), Random Forests (RF), and Artificial Neural Networks (ANN). All techniques have found success in VS, but the future of VS is likely to lean more heavily toward the use of neural networks - and more specifically, Convolutional Neural Networks (CNN), which are a subset of ANN that utilize convolution. We additionally conceptualize a work flow for conducting ML-based VS for potential therapeutics of for AD, a complex neurodegenerative disease with no known cure and prevention. This both serves as an example of how to apply the concepts introduced earlier in the review and as a potential workflow for future implementation. Different ML techniques are powerful tools for VS, and they have advantages and disadvantages albeit. ML-based VS can be applied to AD drug development. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

  13. Virtual screening approach to identifying influenza virus neuraminidase inhibitors using molecular docking combined with machine-learning-based scoring function.

    Science.gov (United States)

    Zhang, Li; Ai, Hai-Xin; Li, Shi-Meng; Qi, Meng-Yuan; Zhao, Jian; Zhao, Qi; Liu, Hong-Sheng

    2017-10-10

    In recent years, an epidemic of the highly pathogenic avian influenza H7N9 virus has persisted in China, with a high mortality rate. To develop novel anti-influenza therapies, we have constructed a machine-learning-based scoring function (RF-NA-Score) for the effective virtual screening of lead compounds targeting the viral neuraminidase (NA) protein. RF-NA-Score is more accurate than RF-Score, with a root-mean-square error of 1.46, Pearson's correlation coefficient of 0.707, and Spearman's rank correlation coefficient of 0.707 in a 5-fold cross-validation study. The performance of RF-NA-Score in a docking-based virtual screening of NA inhibitors was evaluated with a dataset containing 281 NA inhibitors and 322 noninhibitors. Compared with other docking-rescoring virtual screening strategies, rescoring with RF-NA-Score significantly improved the efficiency of virtual screening, and a strategy that averaged the scores given by RF-NA-Score, based on the binding conformations predicted with AutoDock, AutoDock Vina, and LeDock, was shown to be the best strategy. This strategy was then applied to the virtual screening of NA inhibitors in the SPECS database. The 100 selected compounds were tested in an in vitro H7N9 NA inhibition assay, and two compounds with novel scaffolds showed moderate inhibitory activities. These results indicate that RF-NA-Score improves the efficiency of virtual screening for NA inhibitors, and can be used successfully to identify new NA inhibitor scaffolds. Scoring functions specific for other drug targets could also be established with the same method.

  14. Machine learning-based patient specific prompt-gamma dose monitoring in proton therapy

    Science.gov (United States)

    Gueth, P.; Dauvergne, D.; Freud, N.; Létang, J. M.; Ray, C.; Testa, E.; Sarrut, D.

    2013-07-01

    Online dose monitoring in proton therapy is currently being investigated with prompt-gamma (PG) devices. PG emission was shown to be correlated with dose deposition. This relationship is mostly unknown under real conditions. We propose a machine learning approach based on simulations to create optimized treatment-specific classifiers that detect discrepancies between planned and delivered dose. Simulations were performed with the Monte-Carlo platform Gate/Geant4 for a spot-scanning proton therapy treatment and a PG camera prototype currently under investigation. The method first builds a learning set of perturbed situations corresponding to a range of patient translation. This set is then used to train a combined classifier using distal falloff and registered correlation measures. Classifier performances were evaluated using receiver operating characteristic curves and maximum associated specificity and sensitivity. A leave-one-out study showed that it is possible to detect discrepancies of 5 mm with specificity and sensitivity of 85% whereas using only distal falloff decreases the sensitivity down to 77% on the same data set. The proposed method could help to evaluate performance and to optimize the design of PG monitoring devices. It is generic: other learning sets of deviations, other measures and other types of classifiers could be studied to potentially reach better performance. At the moment, the main limitation lies in the computation time needed to perform the simulations.

  15. Representability of algebraic topology for biomolecules in machine learning based scoring and virtual screening.

    Science.gov (United States)

    Cang, Zixuan; Mu, Lin; Wei, Guo-Wei

    2018-01-01

    This work introduces a number of algebraic topology approaches, including multi-component persistent homology, multi-level persistent homology, and electrostatic persistence for the representation, characterization, and description of small molecules and biomolecular complexes. In contrast to the conventional persistent homology, multi-component persistent homology retains critical chemical and biological information during the topological simplification of biomolecular geometric complexity. Multi-level persistent homology enables a tailored topological description of inter- and/or intra-molecular interactions of interest. Electrostatic persistence incorporates partial charge information into topological invariants. These topological methods are paired with Wasserstein distance to characterize similarities between molecules and are further integrated with a variety of machine learning algorithms, including k-nearest neighbors, ensemble of trees, and deep convolutional neural networks, to manifest their descriptive and predictive powers for protein-ligand binding analysis and virtual screening of small molecules. Extensive numerical experiments involving 4,414 protein-ligand complexes from the PDBBind database and 128,374 ligand-target and decoy-target pairs in the DUD database are performed to test respectively the scoring power and the discriminatory power of the proposed topological learning strategies. It is demonstrated that the present topological learning outperforms other existing methods in protein-ligand binding affinity prediction and ligand-decoy discrimination.

  16. Representability of algebraic topology for biomolecules in machine learning based scoring and virtual screening

    Science.gov (United States)

    Mu, Lin

    2018-01-01

    This work introduces a number of algebraic topology approaches, including multi-component persistent homology, multi-level persistent homology, and electrostatic persistence for the representation, characterization, and description of small molecules and biomolecular complexes. In contrast to the conventional persistent homology, multi-component persistent homology retains critical chemical and biological information during the topological simplification of biomolecular geometric complexity. Multi-level persistent homology enables a tailored topological description of inter- and/or intra-molecular interactions of interest. Electrostatic persistence incorporates partial charge information into topological invariants. These topological methods are paired with Wasserstein distance to characterize similarities between molecules and are further integrated with a variety of machine learning algorithms, including k-nearest neighbors, ensemble of trees, and deep convolutional neural networks, to manifest their descriptive and predictive powers for protein-ligand binding analysis and virtual screening of small molecules. Extensive numerical experiments involving 4,414 protein-ligand complexes from the PDBBind database and 128,374 ligand-target and decoy-target pairs in the DUD database are performed to test respectively the scoring power and the discriminatory power of the proposed topological learning strategies. It is demonstrated that the present topological learning outperforms other existing methods in protein-ligand binding affinity prediction and ligand-decoy discrimination. PMID:29309403

  17. Machine learning-based patient specific prompt-gamma dose monitoring in proton therapy

    International Nuclear Information System (INIS)

    Gueth, P; Freud, N; Létang, J M; Sarrut, D; Dauvergne, D; Ray, C; Testa, E

    2013-01-01

    Online dose monitoring in proton therapy is currently being investigated with prompt-gamma (PG) devices. PG emission was shown to be correlated with dose deposition. This relationship is mostly unknown under real conditions. We propose a machine learning approach based on simulations to create optimized treatment-specific classifiers that detect discrepancies between planned and delivered dose. Simulations were performed with the Monte-Carlo platform Gate/Geant4 for a spot-scanning proton therapy treatment and a PG camera prototype currently under investigation. The method first builds a learning set of perturbed situations corresponding to a range of patient translation. This set is then used to train a combined classifier using distal falloff and registered correlation measures. Classifier performances were evaluated using receiver operating characteristic curves and maximum associated specificity and sensitivity. A leave-one-out study showed that it is possible to detect discrepancies of 5 mm with specificity and sensitivity of 85% whereas using only distal falloff decreases the sensitivity down to 77% on the same data set. The proposed method could help to evaluate performance and to optimize the design of PG monitoring devices. It is generic: other learning sets of deviations, other measures and other types of classifiers could be studied to potentially reach better performance. At the moment, the main limitation lies in the computation time needed to perform the simulations. (paper)

  18. A New Perspective for the Training Assessment: Machine Learning-Based Neurometric for Augmented User's Evaluation

    Directory of Open Access Journals (Sweden)

    Gianluca Borghini

    2017-06-01

    Full Text Available Inappropriate training assessment might have either high social costs and economic impacts, especially in high risks categories, such as Pilots, Air Traffic Controllers, or Surgeons. One of the current limitations of the standard training assessment procedures is the lack of information about the amount of cognitive resources requested by the user for the correct execution of the proposed task. In fact, even if the task is accomplished achieving the maximum performance, by the standard training assessment methods, it would not be possible to gather and evaluate information about cognitive resources available for dealing with unexpected events or emergency conditions. Therefore, a metric based on the brain activity (neurometric able to provide the Instructor such a kind of information should be very important. As a first step in this direction, the Electroencephalogram (EEG and the performance of 10 participants were collected along a training period of 3 weeks, while learning the execution of a new task. Specific indexes have been estimated from the behavioral and EEG signal to objectively assess the users' training progress. Furthermore, we proposed a neurometric based on a machine learning algorithm to quantify the user's training level within each session by considering the level of task execution, and both the behavioral and cognitive stabilities between consecutive sessions. The results demonstrated that the proposed methodology and neurometric could quantify and track the users' progresses, and provide the Instructor information for a more objective evaluation and better tailoring of training programs.

  19. A New Perspective for the Training Assessment: Machine Learning-Based Neurometric for Augmented User's Evaluation.

    Science.gov (United States)

    Borghini, Gianluca; Aricò, Pietro; Di Flumeri, Gianluca; Sciaraffa, Nicolina; Colosimo, Alfredo; Herrero, Maria-Trinidad; Bezerianos, Anastasios; Thakor, Nitish V; Babiloni, Fabio

    2017-01-01

    Inappropriate training assessment might have either high social costs and economic impacts, especially in high risks categories, such as Pilots, Air Traffic Controllers, or Surgeons. One of the current limitations of the standard training assessment procedures is the lack of information about the amount of cognitive resources requested by the user for the correct execution of the proposed task. In fact, even if the task is accomplished achieving the maximum performance, by the standard training assessment methods, it would not be possible to gather and evaluate information about cognitive resources available for dealing with unexpected events or emergency conditions. Therefore, a metric based on the brain activity ( neurometric ) able to provide the Instructor such a kind of information should be very important. As a first step in this direction, the Electroencephalogram (EEG) and the performance of 10 participants were collected along a training period of 3 weeks, while learning the execution of a new task. Specific indexes have been estimated from the behavioral and EEG signal to objectively assess the users' training progress. Furthermore, we proposed a neurometric based on a machine learning algorithm to quantify the user's training level within each session by considering the level of task execution, and both the behavioral and cognitive stabilities between consecutive sessions. The results demonstrated that the proposed methodology and neurometric could quantify and track the users' progresses, and provide the Instructor information for a more objective evaluation and better tailoring of training programs.

  20. Machine Learning-based Transient Brokers for Real-time Classification of the LSST Alert Stream

    Science.gov (United States)

    Narayan, Gautham; Zaidi, Tayeb; Soraisam, Monika; ANTARES Collaboration

    2018-01-01

    The number of transient events discovered by wide-field time-domain surveys already far outstrips the combined followup resources of the astronomical community. This number will only increase as we progress towards the commissioning of the Large Synoptic Survey Telescope (LSST), breaking the community's current followup paradigm. Transient brokers - software to sift through, characterize, annotate and prioritize events for followup - will be a critical tool for managing alert streams in the LSST era. Developing the algorithms that underlie the brokers, and obtaining simulated LSST-like datasets prior to LSST commissioning, to train and test these algorithms are formidable, though not insurmountable challenges. The Arizona-NOAO Temporal Analysis and Response to Events System (ANTARES) is a joint project of the National Optical Astronomy Observatory and the Department of Computer Science at the University of Arizona. We have been developing completely automated methods to characterize and classify variable and transient events from their multiband optical photometry. We describe the hierarchical ensemble machine learning algorithm we are developing, and test its performance on sparse, unevenly sampled, heteroskedastic data from various existing observational campaigns, as well as our progress towards incorporating these into a real-time event broker working on live alert streams from time-domain surveys.

  1. Machine-learning-based calving prediction from activity, lying, and ruminating behaviors in dairy cattle.

    Science.gov (United States)

    Borchers, M R; Chang, Y M; Proudfoot, K L; Wadsworth, B A; Stone, A E; Bewley, J M

    2017-07-01

    The objective of this study was to use automated activity, lying, and rumination monitors to characterize prepartum behavior and predict calving in dairy cattle. Data were collected from 20 primiparous and 33 multiparous Holstein dairy cattle from September 2011 to May 2013 at the University of Kentucky Coldstream Dairy. The HR Tag (SCR Engineers Ltd., Netanya, Israel) automatically collected neck activity and rumination data in 2-h increments. The IceQube (IceRobotics Ltd., South Queensferry, United Kingdom) automatically collected number of steps, lying time, standing time, number of transitions from standing to lying (lying bouts), and total motion, summed in 15-min increments. IceQube data were summed in 2-h increments to match HR Tag data. All behavioral data were collected for 14 d before the predicted calving date. Retrospective data analysis was performed using mixed linear models to examine behavioral changes by day in the 14 d before calving. Bihourly behavioral differences from baseline values over the 14 d before calving were also evaluated using mixed linear models. Changes in daily rumination time, total motion, lying time, and lying bouts occurred in the 14 d before calving. In the bihourly analysis, extreme values for all behaviors occurred in the final 24 h, indicating that the monitored behaviors may be useful in calving prediction. To determine whether technologies were useful at predicting calving, random forest, linear discriminant analysis, and neural network machine-learning techniques were constructed and implemented using R version 3.1.0 (R Foundation for Statistical Computing, Vienna, Austria). These methods were used on variables from each technology and all combined variables from both technologies. A neural network analysis that combined variables from both technologies at the daily level yielded 100.0% sensitivity and 86.8% specificity. A neural network analysis that combined variables from both technologies in bihourly increments was

  2. Automated Classification of Radiology Reports for Acute Lung Injury: Comparison of Keyword and Machine Learning Based Natural Language Processing Approaches.

    Science.gov (United States)

    Solti, Imre; Cooke, Colin R; Xia, Fei; Wurfel, Mark M

    2009-11-01

    This paper compares the performance of keyword and machine learning-based chest x-ray report classification for Acute Lung Injury (ALI). ALI mortality is approximately 30 percent. High mortality is, in part, a consequence of delayed manual chest x-ray classification. An automated system could reduce the time to recognize ALI and lead to reductions in mortality. For our study, 96 and 857 chest x-ray reports in two corpora were labeled by domain experts for ALI. We developed a keyword and a Maximum Entropy-based classification system. Word unigram and character n-grams provided the features for the machine learning system. The Maximum Entropy algorithm with character 6-gram achieved the highest performance (Recall=0.91, Precision=0.90 and F-measure=0.91) on the 857-report corpus. This study has shown that for the classification of ALI chest x-ray reports, the machine learning approach is superior to the keyword based system and achieves comparable results to highest performing physician annotators.

  3. A machine learning-based framework to identify type 2 diabetes through electronic health records.

    Science.gov (United States)

    Zheng, Tao; Xie, Wei; Xu, Liling; He, Xiaoying; Zhang, Ya; You, Mingrong; Yang, Gong; Chen, You

    2017-01-01

    To discover diverse genotype-phenotype associations affiliated with Type 2 Diabetes Mellitus (T2DM) via genome-wide association study (GWAS) and phenome-wide association study (PheWAS), more cases (T2DM subjects) and controls (subjects without T2DM) are required to be identified (e.g., via Electronic Health Records (EHR)). However, existing expert based identification algorithms often suffer in a low recall rate and could miss a large number of valuable samples under conservative filtering standards. The goal of this work is to develop a semi-automated framework based on machine learning as a pilot study to liberalize filtering criteria to improve recall rate with a keeping of low false positive rate. We propose a data informed framework for identifying subjects with and without T2DM from EHR via feature engineering and machine learning. We evaluate and contrast the identification performance of widely-used machine learning models within our framework, including k-Nearest-Neighbors, Naïve Bayes, Decision Tree, Random Forest, Support Vector Machine and Logistic Regression. Our framework was conducted on 300 patient samples (161 cases, 60 controls and 79 unconfirmed subjects), randomly selected from 23,281 diabetes related cohort retrieved from a regional distributed EHR repository ranging from 2012 to 2014. We apply top-performing machine learning algorithms on the engineered features. We benchmark and contrast the accuracy, precision, AUC, sensitivity and specificity of classification models against the state-of-the-art expert algorithm for identification of T2DM subjects. Our results indicate that the framework achieved high identification performances (∼0.98 in average AUC), which are much higher than the state-of-the-art algorithm (0.71 in AUC). Expert algorithm-based identification of T2DM subjects from EHR is often hampered by the high missing rates due to their conservative selection criteria. Our framework leverages machine learning and feature

  4. Machine learning methods for planning

    CERN Document Server

    Minton, Steven

    1993-01-01

    Machine Learning Methods for Planning provides information pertinent to learning methods for planning and scheduling. This book covers a wide variety of learning methods and learning architectures, including analogical, case-based, decision-tree, explanation-based, and reinforcement learning.Organized into 15 chapters, this book begins with an overview of planning and scheduling and describes some representative learning systems that have been developed for these tasks. This text then describes a learning apprentice for calendar management. Other chapters consider the problem of temporal credi

  5. Feedback for reinforcement learning based brain-machine interfaces using confidence metrics

    Science.gov (United States)

    Prins, Noeline W.; Sanchez, Justin C.; Prasad, Abhishek

    2017-06-01

    Objective. For brain-machine interfaces (BMI) to be used in activities of daily living by paralyzed individuals, the BMI should be as autonomous as possible. One of the challenges is how the feedback is extracted and utilized in the BMI. Our long-term goal is to create autonomous BMIs that can utilize an evaluative feedback from the brain to update the decoding algorithm and use it intelligently in order to adapt the decoder. In this study, we show how to extract the necessary evaluative feedback from a biologically realistic (synthetic) source, use both the quantity and the quality of the feedback, and how that feedback information can be incorporated into a reinforcement learning (RL) controller architecture to maximize its performance. Approach. Motivated by the perception-action-reward cycle (PARC) in the brain which links reward for cognitive decision making and goal-directed behavior, we used a reward-based RL architecture named Actor-Critic RL as the model. Instead of using an error signal towards building an autonomous BMI, we envision to use a reward signal from the nucleus accumbens (NAcc) which plays a key role in the linking of reward to motor behaviors. To deal with the complexity and non-stationarity of biological reward signals, we used a confidence metric which was used to indicate the degree of feedback accuracy. This confidence was added to the Actor’s weight update equation in the RL controller architecture. If the confidence was high (>0.2), the BMI decoder used this feedback to update its parameters. However, when the confidence was low, the BMI decoder ignored the feedback and did not update its parameters. The range between high confidence and low confidence was termed as the ‘ambiguous’ region. When the feedback was within this region, the BMI decoder updated its weight at a lower rate than when fully confident, which was decided by the confidence. We used two biologically realistic models to generate synthetic data for MI (Izhikevich

  6. Machine learning-based quantitative texture analysis of CT images of small renal masses. Differentiation of angiomyolipoma without visible fat from renal cell carcinoma

    International Nuclear Information System (INIS)

    Feng, Zhichao; Rong, Pengfei; Zhou, Qingyu; Zhu, Wenwei; Yan, Zhimin; Liu, Qianyun; Wang, Wei; Cao, Peng

    2018-01-01

    To evaluate the diagnostic performance of machine-learning based quantitative texture analysis of CT images to differentiate small (≤ 4 cm) angiomyolipoma without visible fat (AMLwvf) from renal cell carcinoma (RCC). This single-institutional retrospective study included 58 patients with pathologically proven small renal mass (17 in AMLwvf and 41 in RCC groups). Texture features were extracted from the largest possible tumorous regions of interest (ROIs) by manual segmentation in preoperative three-phase CT images. Interobserver reliability and the Mann-Whitney U test were applied to select features preliminarily. Then support vector machine with recursive feature elimination (SVM-RFE) and synthetic minority oversampling technique (SMOTE) were adopted to establish discriminative classifiers, and the performance of classifiers was assessed. Of the 42 extracted features, 16 candidate features showed significant intergroup differences (P < 0.05) and had good interobserver agreement. An optimal feature subset including 11 features was further selected by the SVM-RFE method. The SVM-RFE+SMOTE classifier achieved the best performance in discriminating between small AMLwvf and RCC, with the highest accuracy, sensitivity, specificity and AUC of 93.9 %, 87.8 %, 100 % and 0.955, respectively. Machine learning analysis of CT texture features can facilitate the accurate differentiation of small AMLwvf from RCC. (orig.)

  7. An automated, high-throughput plant phenotyping system using machine learning-based plant segmentation and image analysis.

    Science.gov (United States)

    Lee, Unseok; Chang, Sungyul; Putra, Gian Anantrio; Kim, Hyoungseok; Kim, Dong Hwan

    2018-01-01

    A high-throughput plant phenotyping system automatically observes and grows many plant samples. Many plant sample images are acquired by the system to determine the characteristics of the plants (populations). Stable image acquisition and processing is very important to accurately determine the characteristics. However, hardware for acquiring plant images rapidly and stably, while minimizing plant stress, is lacking. Moreover, most software cannot adequately handle large-scale plant imaging. To address these problems, we developed a new, automated, high-throughput plant phenotyping system using simple and robust hardware, and an automated plant-imaging-analysis pipeline consisting of machine-learning-based plant segmentation. Our hardware acquires images reliably and quickly and minimizes plant stress. Furthermore, the images are processed automatically. In particular, large-scale plant-image datasets can be segmented precisely using a classifier developed using a superpixel-based machine-learning algorithm (Random Forest), and variations in plant parameters (such as area) over time can be assessed using the segmented images. We performed comparative evaluations to identify an appropriate learning algorithm for our proposed system, and tested three robust learning algorithms. We developed not only an automatic analysis pipeline but also a convenient means of plant-growth analysis that provides a learning data interface and visualization of plant growth trends. Thus, our system allows end-users such as plant biologists to analyze plant growth via large-scale plant image data easily.

  8. Machine-learning-based real-bogus system for the HSC-SSP moving object detection pipeline

    Science.gov (United States)

    Lin, Hsing-Wen; Chen, Ying-Tung; Wang, Jen-Hung; Wang, Shiang-Yu; Yoshida, Fumi; Ip, Wing-Huen; Miyazaki, Satoshi; Terai, Tsuyoshi

    2018-01-01

    Machine-learning techniques are widely applied in many modern optical sky surveys, e.g., Pan-STARRS1, PTF/iPTF, and the Subaru/Hyper Suprime-Cam survey, to reduce human intervention in data verification. In this study, we have established a machine-learning-based real-bogus system to reject false detections in the Subaru/Hyper-Suprime-Cam Strategic Survey Program (HSC-SSP) source catalog. Therefore, the HSC-SSP moving object detection pipeline can operate more effectively due to the reduction of false positives. To train the real-bogus system, we use stationary sources as the real training set and "flagged" data as the bogus set. The training set contains 47 features, most of which are photometric measurements and shape moments generated from the HSC image reduction pipeline (hscPipe). Our system can reach a true positive rate (tpr) ˜96% with a false positive rate (fpr) ˜1% or tpr ˜99% at fpr ˜5%. Therefore, we conclude that stationary sources are decent real training samples, and using photometry measurements and shape moments can reject false positives effectively.

  9. Machine learning based cloud mask algorithm driven by radiative transfer modeling

    Science.gov (United States)

    Chen, N.; Li, W.; Tanikawa, T.; Hori, M.; Shimada, R.; Stamnes, K. H.

    2017-12-01

    Cloud detection is a critically important first step required to derive many satellite data products. Traditional threshold based cloud mask algorithms require a complicated design process and fine tuning for each sensor, and have difficulty over snow/ice covered areas. With the advance of computational power and machine learning techniques, we have developed a new algorithm based on a neural network classifier driven by extensive radiative transfer modeling. Statistical validation results obtained by using collocated CALIOP and MODIS data show that its performance is consistent over different ecosystems and significantly better than the MODIS Cloud Mask (MOD35 C6) during the winter seasons over mid-latitude snow covered areas. Simulations using a reduced number of satellite channels also show satisfactory results, indicating its flexibility to be configured for different sensors.

  10. Tracking by Machine Learning Methods

    CERN Document Server

    Jofrehei, Arash

    2015-01-01

    Current track reconstructing methods start with two points and then for each layer loop through all possible hits to find proper hits to add to that track. Another idea would be to use this large number of already reconstructed events and/or simulated data and train a machine on this data to find tracks given hit pixels. Training time could be long but real time tracking is really fast Simulation might not be as realistic as real data but tacking has been done for that with 100 percent efficiency while by using real data we would probably be limited to current efficiency.

  11. Prediction of recombinant protein overexpression in Escherichia coli using a machine learning based model (RPOLP).

    Science.gov (United States)

    Habibi, Narjeskhatoon; Norouzi, Alireza; Mohd Hashim, Siti Z; Shamsir, Mohd Shahir; Samian, Razip

    2015-11-01

    Recombinant protein overexpression, an important biotechnological process, is ruled by complex biological rules which are mostly unknown, is in need of an intelligent algorithm so as to avoid resource-intensive lab-based trial and error experiments in order to determine the expression level of the recombinant protein. The purpose of this study is to propose a predictive model to estimate the level of recombinant protein overexpression for the first time in the literature using a machine learning approach based on the sequence, expression vector, and expression host. The expression host was confined to Escherichia coli which is the most popular bacterial host to overexpress recombinant proteins. To provide a handle to the problem, the overexpression level was categorized as low, medium and high. A set of features which were likely to affect the overexpression level was generated based on the known facts (e.g. gene length) and knowledge gathered from related literature. Then, a representative sub-set of features generated in the previous objective was determined using feature selection techniques. Finally a predictive model was developed using random forest classifier which was able to adequately classify the multi-class imbalanced small dataset constructed. The result showed that the predictive model provided a promising accuracy of 80% on average, in estimating the overexpression level of a recombinant protein. Copyright © 2015 Elsevier Ltd. All rights reserved.

  12. Machine learning-based assessment tool for imbalance and vestibular dysfunction with virtual reality rehabilitation system.

    Science.gov (United States)

    Yeh, Shih-Ching; Huang, Ming-Chun; Wang, Pa-Chun; Fang, Te-Yung; Su, Mu-Chun; Tsai, Po-Yi; Rizzo, Albert

    2014-10-01

    Dizziness is a major consequence of imbalance and vestibular dysfunction. Compared to surgery and drug treatments, balance training is non-invasive and more desired. However, training exercises are usually tedious and the assessment tool is insufficient to diagnose patient's severity rapidly. An interactive virtual reality (VR) game-based rehabilitation program that adopted Cawthorne-Cooksey exercises, and a sensor-based measuring system were introduced. To verify the therapeutic effect, a clinical experiment with 48 patients and 36 normal subjects was conducted. Quantified balance indices were measured and analyzed by statistical tools and a Support Vector Machine (SVM) classifier. In terms of balance indices, patients who completed the training process are progressed and the difference between normal subjects and patients is obvious. Further analysis by SVM classifier show that the accuracy of recognizing the differences between patients and normal subject is feasible, and these results can be used to evaluate patients' severity and make rapid assessment. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

  13. Do two machine-learning based prognostic signatures for breast cancer capture the same biological processes?

    Science.gov (United States)

    Drier, Yotam; Domany, Eytan

    2011-03-14

    The fact that there is very little if any overlap between the genes of different prognostic signatures for early-discovery breast cancer is well documented. The reasons for this apparent discrepancy have been explained by the limits of simple machine-learning identification and ranking techniques, and the biological relevance and meaning of the prognostic gene lists was questioned. Subsequently, proponents of the prognostic gene lists claimed that different lists do capture similar underlying biological processes and pathways. The present study places under scrutiny the validity of this claim, for two important gene lists that are at the focus of current large-scale validation efforts. We performed careful enrichment analysis, controlling the effects of multiple testing in a manner which takes into account the nested dependent structure of gene ontologies. In contradiction to several previous publications, we find that the only biological process or pathway for which statistically significant concordance can be claimed is cell proliferation, a process whose relevance and prognostic value was well known long before gene expression profiling. We found that the claims reported by others, of wider concordance between the biological processes captured by the two prognostic signatures studied, were found either to be lacking statistical rigor or were in fact based on addressing some other question.

  14. Do two machine-learning based prognostic signatures for breast cancer capture the same biological processes?

    Directory of Open Access Journals (Sweden)

    Yotam Drier

    2011-03-01

    Full Text Available The fact that there is very little if any overlap between the genes of different prognostic signatures for early-discovery breast cancer is well documented. The reasons for this apparent discrepancy have been explained by the limits of simple machine-learning identification and ranking techniques, and the biological relevance and meaning of the prognostic gene lists was questioned. Subsequently, proponents of the prognostic gene lists claimed that different lists do capture similar underlying biological processes and pathways. The present study places under scrutiny the validity of this claim, for two important gene lists that are at the focus of current large-scale validation efforts. We performed careful enrichment analysis, controlling the effects of multiple testing in a manner which takes into account the nested dependent structure of gene ontologies. In contradiction to several previous publications, we find that the only biological process or pathway for which statistically significant concordance can be claimed is cell proliferation, a process whose relevance and prognostic value was well known long before gene expression profiling. We found that the claims reported by others, of wider concordance between the biological processes captured by the two prognostic signatures studied, were found either to be lacking statistical rigor or were in fact based on addressing some other question.

  15. Machine Learning-based discovery of closures for reduced models of dynamical systems

    Science.gov (United States)

    Pan, Shaowu; Duraisamy, Karthik

    2017-11-01

    Despite the successful application of machine learning (ML) in fields such as image processing and speech recognition, only a few attempts has been made toward employing ML to represent the dynamics of complex physical systems. Previous attempts mostly focus on parameter calibration or data-driven augmentation of existing models. In this work we present a ML framework to discover closure terms in reduced models of dynamical systems and provide insights into potential problems associated with data-driven modeling. Based on exact closure models for linear system, we propose a general linear closure framework from viewpoint of optimization. The framework is based on trapezoidal approximation of convolution term. Hyperparameters that need to be determined include temporal length of memory effect, number of sampling points, and dimensions of hidden states. To circumvent the explicit specification of memory effect, a general framework inspired from neural networks is also proposed. We conduct both a priori and posteriori evaluations of the resulting model on a number of non-linear dynamical systems. This work was supported in part by AFOSR under the project ``LES Modeling of Non-local effects using Statistical Coarse-graining'' with Dr. Jean-Luc Cambier as the technical monitor.

  16. Machine-learning-based Brokers for Real-time Classification of the LSST Alert Stream

    Science.gov (United States)

    Narayan, Gautham; Zaidi, Tayeb; Soraisam, Monika D.; Wang, Zhe; Lochner, Michelle; Matheson, Thomas; Saha, Abhijit; Yang, Shuo; Zhao, Zhenge; Kececioglu, John; Scheidegger, Carlos; Snodgrass, Richard T.; Axelrod, Tim; Jenness, Tim; Maier, Robert S.; Ridgway, Stephen T.; Seaman, Robert L.; Evans, Eric Michael; Singh, Navdeep; Taylor, Clark; Toeniskoetter, Jackson; Welch, Eric; Zhu, Songzhe; The ANTARES Collaboration

    2018-05-01

    The unprecedented volume and rate of transient events that will be discovered by the Large Synoptic Survey Telescope (LSST) demand that the astronomical community update its follow-up paradigm. Alert-brokers—automated software system to sift through, characterize, annotate, and prioritize events for follow-up—will be critical tools for managing alert streams in the LSST era. The Arizona-NOAO Temporal Analysis and Response to Events System (ANTARES) is one such broker. In this work, we develop a machine learning pipeline to characterize and classify variable and transient sources only using the available multiband optical photometry. We describe three illustrative stages of the pipeline, serving the three goals of early, intermediate, and retrospective classification of alerts. The first takes the form of variable versus transient categorization, the second a multiclass typing of the combined variable and transient data set, and the third a purity-driven subtyping of a transient class. Although several similar algorithms have proven themselves in simulations, we validate their performance on real observations for the first time. We quantitatively evaluate our pipeline on sparse, unevenly sampled, heteroskedastic data from various existing observational campaigns, and demonstrate very competitive classification performance. We describe our progress toward adapting the pipeline developed in this work into a real-time broker working on live alert streams from time-domain surveys.

  17. Improving Machining Accuracy of CNC Machines with Innovative Design Methods

    Science.gov (United States)

    Yemelyanov, N. V.; Yemelyanova, I. V.; Zubenko, V. L.

    2018-03-01

    The article considers achieving the machining accuracy of CNC machines by applying innovative methods in modelling and design of machining systems, drives and machine processes. The topological method of analysis involves visualizing the system as matrices of block graphs with a varying degree of detail between the upper and lower hierarchy levels. This approach combines the advantages of graph theory and the efficiency of decomposition methods, it also has visual clarity, which is inherent in both topological models and structural matrices, as well as the resiliency of linear algebra as part of the matrix-based research. The focus of the study is on the design of automated machine workstations, systems, machines and units, which can be broken into interrelated parts and presented as algebraic, topological and set-theoretical models. Every model can be transformed into a model of another type, and, as a result, can be interpreted as a system of linear and non-linear equations which solutions determine the system parameters. This paper analyses the dynamic parameters of the 1716PF4 machine at the stages of design and exploitation. Having researched the impact of the system dynamics on the component quality, the authors have developed a range of practical recommendations which have enabled one to reduce considerably the amplitude of relative motion, exclude some resonance zones within the spindle speed range of 0...6000 min-1 and improve machining accuracy.

  18. Machine Learning-based Individual Assessment of Cortical Atrophy Pattern in Alzheimer's Disease Spectrum: Development of the Classifier and Longitudinal Evaluation.

    Science.gov (United States)

    Lee, Jin San; Kim, Changsoo; Shin, Jeong-Hyeon; Cho, Hanna; Shin, Dae-Seock; Kim, Nakyoung; Kim, Hee Jin; Kim, Yeshin; Lockhart, Samuel N; Na, Duk L; Seo, Sang Won; Seong, Joon-Kyung

    2018-03-07

    To develop a new method for measuring Alzheimer's disease (AD)-specific similarity of cortical atrophy patterns at the individual-level, we employed an individual-level machine learning algorithm. A total of 869 cognitively normal (CN) individuals and 473 patients with probable AD dementia who underwent high-resolution 3T brain MRI were included. We propose a machine learning-based method for measuring the similarity of an individual subject's cortical atrophy pattern with that of a representative AD patient cohort. In addition, we validated this similarity measure in two longitudinal cohorts consisting of 79 patients with amnestic-mild cognitive impairment (aMCI) and 27 patients with probable AD dementia. Surface-based morphometry classifier for discriminating AD from CN showed sensitivity and specificity values of 87.1% and 93.3%, respectively. In the longitudinal validation study, aMCI-converts had higher atrophy similarity at both baseline (p < 0.001) and first year visits (p < 0.001) relative to non-converters. Similarly, AD patients with faster decline had higher atrophy similarity than slower decliners at baseline (p = 0.042), first year (p = 0.028), and third year visits (p = 0.027). The AD-specific atrophy similarity measure is a novel approach for the prediction of dementia risk and for the evaluation of AD trajectories on an individual subject level.

  19. A Machine Learning-Based Analysis of Game Data for Attention Deficit Hyperactivity Disorder Assessment.

    Science.gov (United States)

    Heller, Monika D; Roots, Kurt; Srivastava, Sanjana; Schumann, Jennifer; Srivastava, Jaideep; Hale, T Sigi

    2013-10-01

    Attention deficit hyperactivity disorder (ADHD) is found in 9.5 percent of the U.S. population and poses lifelong challenges. Current diagnostic approaches rely on evaluation forms completed by teachers and/or parents, although they are not specifically trained to recognize cognitive disorders. The most accurate diagnosis is by a psychiatrist, often only available to children with severe symptoms. Development of a tool that is engaging and objective and aids medical providers is needed in the diagnosis of ADHD. The goal of this research is to work toward the development of such a tool. The proposed approach takes advantage of two trends: The rapid adoption of tangible user interface devices and the popularity of interactive videogames. CogCubed Inc. (Minneapolis, MN) has created "Groundskeeper," a game on the Sifteo Cubes (Sifteo, Inc., San Francisco, CA) game system with elements that exercise skills affected by ADHD. "Groundskeeper" was evaluated for 52 patients, with and without ADHD. Gameplay data were mathematically transformed into ADHD-indicative feature variables and subjected to machine learning algorithms to develop diagnostic models to aid psychiatric clinical assessments of ADHD. The effectiveness of the developed model was evaluated against the diagnostic impressions of two licensed child/adolescent psychiatrists using semistructured interviews. Our predictive algorithms were highly accurate in correctly predicting diagnoses based on gameplay of "Groundskeeper." The F-measure, a measure of diagnosis accuracy, from the predictive models gave values as follows: ADHD, inattentive type, 78 percent (P>0.05); ADHD, combined type, 75 percent (Pdepressive disorders, 76%. This represents a promising new approach to screening tools for ADHD.

  20. Deep machine learning based Image classification in hard disk drive manufacturing (Conference Presentation)

    Science.gov (United States)

    Rana, Narender; Chien, Chester

    2018-03-01

    A key sensor element in a Hard Disk Drive (HDD) is the read-write head device. The device is complex 3D shape and its fabrication requires over thousand process steps with many of them being various types of image inspection and critical dimension (CD) metrology steps. In order to have high yield of devices across a wafer, very tight inspection and metrology specifications are implemented. Many images are collected on a wafer and inspected for various types of defects and in CD metrology the quality of image impacts the CD measurements. Metrology noise need to be minimized in CD metrology to get better estimate of the process related variations for implementing robust process controls. Though there are specialized tools available for defect inspection and review allowing classification and statistics. However, due to unavailability of such advanced tools or other reasons, many times images need to be manually inspected. SEM Image inspection and CD-SEM metrology tools are different tools differing in software as well. SEM Image inspection and CD-SEM metrology tools are separate tools differing in software and purpose. There have been cases where a significant numbers of CD-SEM images are blurred or have some artefact and there is a need for image inspection along with the CD measurement. Tool may not report a practical metric highlighting the quality of image. Not filtering CD from these blurred images will add metrology noise to the CD measurement. An image classifier can be helpful here for filtering such data. This paper presents the use of artificial intelligence in classifying the SEM images. Deep machine learning is used to train a neural network which is then used to classify the new images as blurred and not blurred. Figure 1 shows the image blur artefact and contingency table of classification results from the trained deep neural network. Prediction accuracy of 94.9 % was achieved in the first model. Paper covers other such applications of the deep neural

  1. Long Noncoding RNA Identification: Comparing Machine Learning Based Tools for Long Noncoding Transcripts Discrimination

    Directory of Open Access Journals (Sweden)

    Siyu Han

    2016-01-01

    Full Text Available Long noncoding RNA (lncRNA is a kind of noncoding RNA with length more than 200 nucleotides, which aroused interest of people in recent years. Lots of studies have confirmed that human genome contains many thousands of lncRNAs which exert great influence over some critical regulators of cellular process. With the advent of high-throughput sequencing technologies, a great quantity of sequences is waiting for exploitation. Thus, many programs are developed to distinguish differences between coding and long noncoding transcripts. Different programs are generally designed to be utilised under different circumstances and it is sensible and practical to select an appropriate method according to a certain situation. In this review, several popular methods and their advantages, disadvantages, and application scopes are summarised to assist people in employing a suitable method and obtaining a more reliable result.

  2. TH-CD-206-05: Machine-Learning Based Segmentation of Organs at Risks for Head and Neck Radiotherapy Planning

    Energy Technology Data Exchange (ETDEWEB)

    Ibragimov, B [Stanford University, Stanford, CA (United States); Pernus, F [University of Ljubljana, Ljubljana (Slovenia); Strojan, P; Xing, L [Institute of Oncology, Ljubljana (Slovenia)

    2016-06-15

    Purpose: Accurate and efficient delineation of tumor target and organs-at-risks is essential for the success of radiotherapy. In reality, despite of decades of intense research efforts, auto-segmentation has not yet become clinical practice. In this study, we present, for the first time, a deep learning-based classification algorithm for autonomous segmentation in head and neck (HaN) treatment planning. Methods: Fifteen HN datasets of CT, MR and PET images with manual annotation of organs-at-risk (OARs) including spinal cord, brainstem, optic nerves, chiasm, eyes, mandible, tongue, parotid glands were collected and saved in a library of plans. We also have ten super-resolution MR images of the tongue area, where the genioglossus and inferior longitudinalis tongue muscles are defined as organs of interest. We applied the concepts of random forest- and deep learning-based object classification for automated image annotation with the aim of using machine learning to facilitate head and neck radiotherapy planning process. In this new paradigm of segmentation, random forests were used for landmark-assisted segmentation of super-resolution MR images. Alternatively to auto-segmentation with random forest-based landmark detection, deep convolutional neural networks were developed for voxel-wise segmentation of OARs in single and multi-modal images. The network consisted of three pairs of convolution and pooing layer, one RuLU layer and a softmax layer. Results: We present a comprehensive study on using machine learning concepts for auto-segmentation of OARs and tongue muscles for the HaN radiotherapy planning. An accuracy of 81.8% in terms of Dice coefficient was achieved for segmentation of genioglossus and inferior longitudinalis tongue muscles. Preliminary results of OARs regimentation also indicate that deep-learning afforded an unprecedented opportunities to improve the accuracy and robustness of radiotherapy planning. Conclusion: A novel machine learning framework

  3. TH-CD-206-05: Machine-Learning Based Segmentation of Organs at Risks for Head and Neck Radiotherapy Planning

    International Nuclear Information System (INIS)

    Ibragimov, B; Pernus, F; Strojan, P; Xing, L

    2016-01-01

    Purpose: Accurate and efficient delineation of tumor target and organs-at-risks is essential for the success of radiotherapy. In reality, despite of decades of intense research efforts, auto-segmentation has not yet become clinical practice. In this study, we present, for the first time, a deep learning-based classification algorithm for autonomous segmentation in head and neck (HaN) treatment planning. Methods: Fifteen HN datasets of CT, MR and PET images with manual annotation of organs-at-risk (OARs) including spinal cord, brainstem, optic nerves, chiasm, eyes, mandible, tongue, parotid glands were collected and saved in a library of plans. We also have ten super-resolution MR images of the tongue area, where the genioglossus and inferior longitudinalis tongue muscles are defined as organs of interest. We applied the concepts of random forest- and deep learning-based object classification for automated image annotation with the aim of using machine learning to facilitate head and neck radiotherapy planning process. In this new paradigm of segmentation, random forests were used for landmark-assisted segmentation of super-resolution MR images. Alternatively to auto-segmentation with random forest-based landmark detection, deep convolutional neural networks were developed for voxel-wise segmentation of OARs in single and multi-modal images. The network consisted of three pairs of convolution and pooing layer, one RuLU layer and a softmax layer. Results: We present a comprehensive study on using machine learning concepts for auto-segmentation of OARs and tongue muscles for the HaN radiotherapy planning. An accuracy of 81.8% in terms of Dice coefficient was achieved for segmentation of genioglossus and inferior longitudinalis tongue muscles. Preliminary results of OARs regimentation also indicate that deep-learning afforded an unprecedented opportunities to improve the accuracy and robustness of radiotherapy planning. Conclusion: A novel machine learning framework

  4. Optimizing a machine learning based glioma grading system using multi-parametric MRI histogram and texture features.

    Science.gov (United States)

    Zhang, Xin; Yan, Lin-Feng; Hu, Yu-Chuan; Li, Gang; Yang, Yang; Han, Yu; Sun, Ying-Zhi; Liu, Zhi-Cheng; Tian, Qiang; Han, Zi-Yang; Liu, Le-De; Hu, Bin-Quan; Qiu, Zi-Yu; Wang, Wen; Cui, Guang-Bin

    2017-07-18

    Current machine learning techniques provide the opportunity to develop noninvasive and automated glioma grading tools, by utilizing quantitative parameters derived from multi-modal magnetic resonance imaging (MRI) data. However, the efficacies of different machine learning methods in glioma grading have not been investigated.A comprehensive comparison of varied machine learning methods in differentiating low-grade gliomas (LGGs) and high-grade gliomas (HGGs) as well as WHO grade II, III and IV gliomas based on multi-parametric MRI images was proposed in the current study. The parametric histogram and image texture attributes of 120 glioma patients were extracted from the perfusion, diffusion and permeability parametric maps of preoperative MRI. Then, 25 commonly used machine learning classifiers combined with 8 independent attribute selection methods were applied and evaluated using leave-one-out cross validation (LOOCV) strategy. Besides, the influences of parameter selection on the classifying performances were investigated. We found that support vector machine (SVM) exhibited superior performance to other classifiers. By combining all tumor attributes with synthetic minority over-sampling technique (SMOTE), the highest classifying accuracy of 0.945 or 0.961 for LGG and HGG or grade II, III and IV gliomas was achieved. Application of Recursive Feature Elimination (RFE) attribute selection strategy further improved the classifying accuracies. Besides, the performances of LibSVM, SMO, IBk classifiers were influenced by some key parameters such as kernel type, c, gama, K, etc. SVM is a promising tool in developing automated preoperative glioma grading system, especially when being combined with RFE strategy. Model parameters should be considered in glioma grading model optimization.

  5. Arctic Sea Ice Thickness Estimation from CryoSat-2 Satellite Data Using Machine Learning-Based Lead Detection

    Directory of Open Access Journals (Sweden)

    Sanggyun Lee

    2016-08-01

    Full Text Available Satellite altimeters have been used to monitor Arctic sea ice thickness since the early 2000s. In order to estimate sea ice thickness from satellite altimeter data, leads (i.e., cracks between ice floes should first be identified for the calculation of sea ice freeboard. In this study, we proposed novel approaches for lead detection using two machine learning algorithms: decision trees and random forest. CryoSat-2 satellite data collected in March and April of 2011–2014 over the Arctic region were used to extract waveform parameters that show the characteristics of leads, ice floes and ocean, including stack standard deviation, stack skewness, stack kurtosis, pulse peakiness and backscatter sigma-0. The parameters were used to identify leads in the machine learning models. Results show that the proposed approaches, with overall accuracy >90%, produced much better performance than existing lead detection methods based on simple thresholding approaches. Sea ice thickness estimated based on the machine learning-detected leads was compared to the averaged Airborne Electromagnetic (AEM-bird data collected over two days during the CryoSat Validation experiment (CryoVex field campaign in April 2011. This comparison showed that the proposed machine learning methods had better performance (up to r = 0.83 and Root Mean Square Error (RMSE = 0.29 m compared to thickness estimation based on existing lead detection methods (RMSE = 0.86–0.93 m. Sea ice thickness based on the machine learning approaches showed a consistent decline from 2011–2013 and rebounded in 2014.

  6. Advanced Cell Classifier: User-Friendly Machine-Learning-Based Software for Discovering Phenotypes in High-Content Imaging Data.

    Science.gov (United States)

    Piccinini, Filippo; Balassa, Tamas; Szkalisity, Abel; Molnar, Csaba; Paavolainen, Lassi; Kujala, Kaisa; Buzas, Krisztina; Sarazova, Marie; Pietiainen, Vilja; Kutay, Ulrike; Smith, Kevin; Horvath, Peter

    2017-06-28

    High-content, imaging-based screens now routinely generate data on a scale that precludes manual verification and interrogation. Software applying machine learning has become an essential tool to automate analysis, but these methods require annotated examples to learn from. Efficiently exploring large datasets to find relevant examples remains a challenging bottleneck. Here, we present Advanced Cell Classifier (ACC), a graphical software package for phenotypic analysis that addresses these difficulties. ACC applies machine-learning and image-analysis methods to high-content data generated by large-scale, cell-based experiments. It features methods to mine microscopic image data, discover new phenotypes, and improve recognition performance. We demonstrate that these features substantially expedite the training process, successfully uncover rare phenotypes, and improve the accuracy of the analysis. ACC is extensively documented, designed to be user-friendly for researchers without machine-learning expertise, and distributed as a free open-source tool at www.cellclassifier.org. Copyright © 2017 Elsevier Inc. All rights reserved.

  7. Electrical machining method of insulating ceramics

    International Nuclear Information System (INIS)

    Fukuzawa, Y.; Mohri, N.; Tani, T.

    1999-01-01

    This paper describes a new electrical discharge machining method for insulating ceramics using an assisting electrode with either a sinking electrical discharge machine or a wire electrical discharge machine. In this method, the metal sheet or mesh is attached to the ceramic surface as an assisting material for the discharge generation around the insulator surface. When the machining condition changes from the attached material to the workpiece, a cracked carbon layer is formed on the workpiece surface. As this layer has an electrical conductivity, electrical discharge occurs in working oil between the tool electrode and the surface of the workpiece. The carbon is formed from the working oil during this electrical discharge. Even after the material is machined, an electrical discharge occurs in the gap region between the tool electrode and the ceramic because an electrically conductive layer is generated continuously. Insulating ceramics can be machined by the electrical discharge machining method using the above mentioned surface modification phenomenon. In this paper the authors show a machined example demonstrating that the proposed method is available for machining a complex shape on insulating ceramics. Copyright (1999) AD-TECH - International Foundation for the Advancement of Technology Ltd

  8. Learning-based controller for biotechnology processing, and method of using

    Science.gov (United States)

    Johnson, John A.; Stoner, Daphne L.; Larsen, Eric D.; Miller, Karen S.; Tolle, Charles R.

    2004-09-14

    The present invention relates to process control where some of the controllable parameters are difficult or impossible to characterize. The present invention relates to process control in biotechnology of such systems, but not limited to. Additionally, the present invention relates to process control in biotechnology minerals processing. In the inventive method, an application of the present invention manipulates a minerals bioprocess to find local exterma (maxima or minima) for selected output variables/process goals by using a learning-based controller for bioprocess oxidation of minerals during hydrometallurgical processing. The learning-based controller operates with or without human supervision and works to find processor optima without previously defined optima due to the non-characterized nature of the process being manipulated.

  9. Inner and outer coronary vessel wall segmentation from CCTA using an active contour model with machine learning-based 3D voxel context-aware image force

    Science.gov (United States)

    Sivalingam, Udhayaraj; Wels, Michael; Rempfler, Markus; Grosskopf, Stefan; Suehling, Michael; Menze, Bjoern H.

    2016-03-01

    In this paper, we present a fully automated approach to coronary vessel segmentation, which involves calcification or soft plaque delineation in addition to accurate lumen delineation, from 3D Cardiac Computed Tomography Angiography data. Adequately virtualizing the coronary lumen plays a crucial role for simulating blood ow by means of fluid dynamics while additionally identifying the outer vessel wall in the case of arteriosclerosis is a prerequisite for further plaque compartment analysis. Our method is a hybrid approach complementing Active Contour Model-based segmentation with an external image force that relies on a Random Forest Regression model generated off-line. The regression model provides a strong estimate of the distance to the true vessel surface for every surface candidate point taking into account 3D wavelet-encoded contextual image features, which are aligned with the current surface hypothesis. The associated external image force is integrated in the objective function of the active contour model, such that the overall segmentation approach benefits from the advantages associated with snakes and from the ones associated with machine learning-based regression alike. This yields an integrated approach achieving competitive results on a publicly available benchmark data collection (Rotterdam segmentation challenge).

  10. Machine-Learning Based Channel Quality and Stability Estimation for Stream-Based Multichannel Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Waqas Rehan

    2016-09-01

    Full Text Available Wireless sensor networks (WSNs have become more and more diversified and are today able to also support high data rate applications, such as multimedia. In this case, per-packet channel handshaking/switching may result in inducing additional overheads, such as energy consumption, delays and, therefore, data loss. One of the solutions is to perform stream-based channel allocation where channel handshaking is performed once before transmitting the whole data stream. Deciding stream-based channel allocation is more critical in case of multichannel WSNs where channels of different quality/stability are available and the wish for high performance requires sensor nodes to switch to the best among the available channels. In this work, we will focus on devising mechanisms that perform channel quality/stability estimation in order to improve the accommodation of stream-based communication in multichannel wireless sensor networks. For performing channel quality assessment, we have formulated a composite metric, which we call channel rank measurement (CRM, that can demarcate channels into good, intermediate and bad quality on the basis of the standard deviation of the received signal strength indicator (RSSI and the average of the link quality indicator (LQI of the received packets. CRM is then used to generate a data set for training a supervised machine learning-based algorithm (which we call Normal Equation based Channel quality prediction (NEC algorithm in such a way that it may perform instantaneous channel rank estimation of any channel. Subsequently, two robust extensions of the NEC algorithm are proposed (which we call Normal Equation based Weighted Moving Average Channel quality prediction (NEWMAC algorithm and Normal Equation based Aggregate Maturity Criteria with Beta Tracking based Channel weight prediction (NEAMCBTC algorithm, that can perform channel quality estimation on the basis of both current and past values of channel rank estimation

  11. Machine-Learning Based Channel Quality and Stability Estimation for Stream-Based Multichannel Wireless Sensor Networks.

    Science.gov (United States)

    Rehan, Waqas; Fischer, Stefan; Rehan, Maaz

    2016-09-12

    Wireless sensor networks (WSNs) have become more and more diversified and are today able to also support high data rate applications, such as multimedia. In this case, per-packet channel handshaking/switching may result in inducing additional overheads, such as energy consumption, delays and, therefore, data loss. One of the solutions is to perform stream-based channel allocation where channel handshaking is performed once before transmitting the whole data stream. Deciding stream-based channel allocation is more critical in case of multichannel WSNs where channels of different quality/stability are available and the wish for high performance requires sensor nodes to switch to the best among the available channels. In this work, we will focus on devising mechanisms that perform channel quality/stability estimation in order to improve the accommodation of stream-based communication in multichannel wireless sensor networks. For performing channel quality assessment, we have formulated a composite metric, which we call channel rank measurement (CRM), that can demarcate channels into good, intermediate and bad quality on the basis of the standard deviation of the received signal strength indicator (RSSI) and the average of the link quality indicator (LQI) of the received packets. CRM is then used to generate a data set for training a supervised machine learning-based algorithm (which we call Normal Equation based Channel quality prediction (NEC) algorithm) in such a way that it may perform instantaneous channel rank estimation of any channel. Subsequently, two robust extensions of the NEC algorithm are proposed (which we call Normal Equation based Weighted Moving Average Channel quality prediction (NEWMAC) algorithm and Normal Equation based Aggregate Maturity Criteria with Beta Tracking based Channel weight prediction (NEAMCBTC) algorithm), that can perform channel quality estimation on the basis of both current and past values of channel rank estimation. In the end

  12. Machine-learning-based classification of real-time tissue elastography for hepatic fibrosis in patients with chronic hepatitis B.

    Science.gov (United States)

    Chen, Yang; Luo, Yan; Huang, Wei; Hu, Die; Zheng, Rong-Qin; Cong, Shu-Zhen; Meng, Fan-Kun; Yang, Hong; Lin, Hong-Jun; Sun, Yan; Wang, Xiu-Yan; Wu, Tao; Ren, Jie; Pei, Shu-Fang; Zheng, Ying; He, Yun; Hu, Yu; Yang, Na; Yan, Hongmei

    2017-10-01

    Hepatic fibrosis is a common middle stage of the pathological processes of chronic liver diseases. Clinical intervention during the early stages of hepatic fibrosis can slow the development of liver cirrhosis and reduce the risk of developing liver cancer. Performing a liver biopsy, the gold standard for viral liver disease management, has drawbacks such as invasiveness and a relatively high sampling error rate. Real-time tissue elastography (RTE), one of the most recently developed technologies, might be promising imaging technology because it is both noninvasive and provides accurate assessments of hepatic fibrosis. However, determining the stage of liver fibrosis from RTE images in a clinic is a challenging task. In this study, in contrast to the previous liver fibrosis index (LFI) method, which predicts the stage of diagnosis using RTE images and multiple regression analysis, we employed four classical classifiers (i.e., Support Vector Machine, Naïve Bayes, Random Forest and K-Nearest Neighbor) to build a decision-support system to improve the hepatitis B stage diagnosis performance. Eleven RTE image features were obtained from 513 subjects who underwent liver biopsies in this multicenter collaborative research. The experimental results showed that the adopted classifiers significantly outperformed the LFI method and that the Random Forest(RF) classifier provided the highest average accuracy among the four machine algorithms. This result suggests that sophisticated machine-learning methods can be powerful tools for evaluating the stage of hepatic fibrosis and show promise for clinical applications. Copyright © 2017 Elsevier Ltd. All rights reserved.

  13. Supervised machine learning-based classification scheme to segment the brainstem on MRI in multicenter brain tumor treatment context.

    Science.gov (United States)

    Dolz, Jose; Laprie, Anne; Ken, Soléakhéna; Leroy, Henri-Arthur; Reyns, Nicolas; Massoptier, Laurent; Vermandel, Maximilien

    2016-01-01

    To constrain the risk of severe toxicity in radiotherapy and radiosurgery, precise volume delineation of organs at risk is required. This task is still manually performed, which is time-consuming and prone to observer variability. To address these issues, and as alternative to atlas-based segmentation methods, machine learning techniques, such as support vector machines (SVM), have been recently presented to segment subcortical structures on magnetic resonance images (MRI). SVM is proposed to segment the brainstem on MRI in multicenter brain cancer context. A dataset composed by 14 adult brain MRI scans is used to evaluate its performance. In addition to spatial and probabilistic information, five different image intensity values (IIVs) configurations are evaluated as features to train the SVM classifier. Segmentation accuracy is evaluated by computing the Dice similarity coefficient (DSC), absolute volumes difference (AVD) and percentage volume difference between automatic and manual contours. Mean DSC for all proposed IIVs configurations ranged from 0.89 to 0.90. Mean AVD values were below 1.5 cm(3), where the value for best performing IIVs configuration was 0.85 cm(3), representing an absolute mean difference of 3.99% with respect to the manual segmented volumes. Results suggest consistent volume estimation and high spatial similarity with respect to expert delineations. The proposed approach outperformed presented methods to segment the brainstem, not only in volume similarity metrics, but also in segmentation time. Preliminary results showed that the approach might be promising for adoption in clinical use.

  14. Multiple machine learning based descriptive and predictive workflow for the identification of potential PTP1B inhibitors.

    Science.gov (United States)

    Chandra, Sharat; Pandey, Jyotsana; Tamrakar, Akhilesh Kumar; Siddiqi, Mohammad Imran

    2017-01-01

    In insulin and leptin signaling pathway, Protein-Tyrosine Phosphatase 1B (PTP1B) plays a crucial controlling role as a negative regulator, which makes it an attractive therapeutic target for both Type-2 Diabetes (T2D) and obesity. In this work, we have generated classification models by using the inhibition data set of known PTP1B inhibitors to identify new inhibitors of PTP1B utilizing multiple machine learning techniques like naïve Bayesian, random forest, support vector machine and k-nearest neighbors, along with structural fingerprints and selected molecular descriptors. Several models from each algorithm have been constructed and optimized, with the different combination of molecular descriptors and structural fingerprints. For the training and test sets, most of the predictive models showed more than 90% of overall prediction accuracies. The best model was obtained with support vector machine approach and has Matthews Correlation Coefficient of 0.82 for the external test set, which was further employed for the virtual screening of Maybridge small compound database. Five compounds were subsequently selected for experimental assay. Out of these two compounds were found to inhibit PTP1B with significant inhibitory activity in in-vitro inhibition assay. The structural fragments which are important for PTP1B inhibition were identified by naïve Bayesian method and can be further exploited to design new molecules around the identified scaffolds. The descriptive and predictive modeling strategy applied in this study is capable of identifying PTP1B inhibitors from the large compound libraries. Copyright © 2016 Elsevier Inc. All rights reserved.

  15. Machine Learning Based Dimensionality Reduction Facilitates Ligand Diffusion Paths Assessment: A Case of Cytochrome P450cam.

    Science.gov (United States)

    Rydzewski, J; Nowak, W

    2016-04-12

    In this work we propose an application of a nonlinear dimensionality reduction method to represent the high-dimensional configuration space of the ligand-protein dissociation process in a manner facilitating interpretation. Rugged ligand expulsion paths are mapped into 2-dimensional space. The mapping retains the main structural changes occurring during the dissociation. The topological similarity of the reduced paths may be easily studied using the Fréchet distances, and we show that this measure facilitates machine learning classification of the diffusion pathways. Further, low-dimensional configuration space allows for identification of residues active in transport during the ligand diffusion from a protein. The utility of this approach is illustrated by examination of the configuration space of cytochrome P450cam involved in expulsing camphor by means of enhanced all-atom molecular dynamics simulations. The expulsion trajectories are sampled and constructed on-the-fly during molecular dynamics simulations using the recently developed memetic algorithms [ Rydzewski, J.; Nowak, W. J. Chem. Phys. 2015 , 143 ( 12 ), 124101 ]. We show that the memetic algorithms are effective for enforcing the ligand diffusion and cavity exploration in the P450cam-camphor complex. Furthermore, we demonstrate that machine learning techniques are helpful in inspecting ligand diffusion landscapes and provide useful tools to examine structural changes accompanying rare events.

  16. Finite Element Method in Machining Processes

    CERN Document Server

    Markopoulos, Angelos P

    2013-01-01

    Finite Element Method in Machining Processes provides a concise study on the way the Finite Element Method (FEM) is used in the case of manufacturing processes, primarily in machining. The basics of this kind of modeling are detailed to create a reference that will provide guidelines for those who start to study this method now, but also for scientists already involved in FEM and want to expand their research. A discussion on FEM, formulations and techniques currently in use is followed up by machining case studies. Orthogonal cutting, oblique cutting, 3D simulations for turning and milling, grinding, and state-of-the-art topics such as high speed machining and micromachining are explained with relevant examples. This is all supported by a literature review and a reference list for further study. As FEM is a key method for researchers in the manufacturing and especially in the machining sector, Finite Element Method in Machining Processes is a key reference for students studying manufacturing processes but al...

  17. Soil-pipe interaction modeling for pipe behavior prediction with super learning based methods

    Science.gov (United States)

    Shi, Fang; Peng, Xiang; Liu, Huan; Hu, Yafei; Liu, Zheng; Li, Eric

    2018-03-01

    Underground pipelines are subject to severe distress from the surrounding expansive soil. To investigate the structural response of water mains to varying soil movements, field data, including pipe wall strains in situ soil water content, soil pressure and temperature, was collected. The research on monitoring data analysis has been reported, but the relationship between soil properties and pipe deformation has not been well-interpreted. To characterize the relationship between soil property and pipe deformation, this paper presents a super learning based approach combining feature selection algorithms to predict the water mains structural behavior in different soil environments. Furthermore, automatic variable selection method, e.i. recursive feature elimination algorithm, were used to identify the critical predictors contributing to the pipe deformations. To investigate the adaptability of super learning to different predictive models, this research employed super learning based methods to three different datasets. The predictive performance was evaluated by R-squared, root-mean-square error and mean absolute error. Based on the prediction performance evaluation, the superiority of super learning was validated and demonstrated by predicting three types of pipe deformations accurately. In addition, a comprehensive understand of the water mains working environments becomes possible.

  18. Machine Learning-Based Content Analysis: Automating the analysis of frames and agendas in political communication research

    NARCIS (Netherlands)

    Burscher, B.

    2016-01-01

    We used machine learning to study policy issues and frames in political messages. With regard to frames, we investigated the automation of two content-analytical tasks: frame coding and frame identification. We found that both tasks can be successfully automated by means of machine learning

  19. WE-H-BRC-06: A Unified Machine-Learning Based Probabilistic Model for Automated Anomaly Detection in the Treatment Plan Data

    International Nuclear Information System (INIS)

    Chang, X; Liu, S; Kalet, A; Yang, D

    2016-01-01

    Purpose: The purpose of this work was to investigate the ability of a machine-learning based probabilistic approach to detect radiotherapy treatment plan anomalies given initial disease classes information. Methods In total we obtained 1112 unique treatment plans with five plan parameters and disease information from a Mosaiq treatment management system database for use in the study. The plan parameters include prescription dose, fractions, fields, modality and techniques. The disease information includes disease site, and T, M and N disease stages. A Bayesian network method was employed to model the probabilistic relationships between tumor disease information, plan parameters and an anomaly flag. A Bayesian learning method with Dirichlet prior was useed to learn the joint probabilities between dependent variables in error-free plan data and data with artificially induced anomalies. In the study, we randomly sampled data with anomaly in a specified anomaly space.We tested the approach with three groups of plan anomalies – improper concurrence of values of all five plan parameters and values of any two out of five parameters, and all single plan parameter value anomalies. Totally, 16 types of plan anomalies were covered by the study. For each type, we trained an individual Bayesian network. Results: We found that the true positive rate (recall) and positive predictive value (precision) to detect concurrence anomalies of five plan parameters in new patient cases were 94.45±0.26% and 93.76±0.39% respectively. To detect other 15 types of plan anomalies, the average recall and precision were 93.61±2.57% and 93.78±3.54% respectively. The computation time to detect the plan anomaly of each type in a new plan is ∼0.08 seconds. Conclusion: The proposed method for treatment plan anomaly detection was found effective in the initial tests. The results suggest that this type of models could be applied to develop plan anomaly detection tools to assist manual and

  20. WE-H-BRC-06: A Unified Machine-Learning Based Probabilistic Model for Automated Anomaly Detection in the Treatment Plan Data

    Energy Technology Data Exchange (ETDEWEB)

    Chang, X; Liu, S [Washington University in St. Louis, St. Louis, MO (United States); Kalet, A [University of Washington Medical Center, Seattle, WA (United States); Yang, D [Washington University in St Louis, St Louis, MO (United States)

    2016-06-15

    Purpose: The purpose of this work was to investigate the ability of a machine-learning based probabilistic approach to detect radiotherapy treatment plan anomalies given initial disease classes information. Methods In total we obtained 1112 unique treatment plans with five plan parameters and disease information from a Mosaiq treatment management system database for use in the study. The plan parameters include prescription dose, fractions, fields, modality and techniques. The disease information includes disease site, and T, M and N disease stages. A Bayesian network method was employed to model the probabilistic relationships between tumor disease information, plan parameters and an anomaly flag. A Bayesian learning method with Dirichlet prior was useed to learn the joint probabilities between dependent variables in error-free plan data and data with artificially induced anomalies. In the study, we randomly sampled data with anomaly in a specified anomaly space.We tested the approach with three groups of plan anomalies – improper concurrence of values of all five plan parameters and values of any two out of five parameters, and all single plan parameter value anomalies. Totally, 16 types of plan anomalies were covered by the study. For each type, we trained an individual Bayesian network. Results: We found that the true positive rate (recall) and positive predictive value (precision) to detect concurrence anomalies of five plan parameters in new patient cases were 94.45±0.26% and 93.76±0.39% respectively. To detect other 15 types of plan anomalies, the average recall and precision were 93.61±2.57% and 93.78±3.54% respectively. The computation time to detect the plan anomaly of each type in a new plan is ∼0.08 seconds. Conclusion: The proposed method for treatment plan anomaly detection was found effective in the initial tests. The results suggest that this type of models could be applied to develop plan anomaly detection tools to assist manual and

  1. Machine learning-based Landsat-MODIS data fusion approach for 8-day 30m evapotranspiration monitoring

    Science.gov (United States)

    Im, J.; Ke, Y.; Park, S.

    2016-12-01

    Continuous monitoring of evapotranspiration (ET) is important for understanding of hydrological cycles and energy flux dynamics. At regional and local scales, routine ET estimation is a critical for efficient water management, drought impact assessment and ecosystem health monitoring, etc. Remote sensing has long been recognized to be able to provide ET monitoring over large areas. However, no single satellite could provide temporally continuous ET at relatively high spatial resolution due to the trade-off between the spatial and temporal resolution of current satellite sensors. Landsat-series satellites provide optical and thermal imagery at 30-100m resolution, whereas the 16-day revisit cycle hinders the observation of ET dynamics; MODIS provides sources of ET estimation at daily basis, but the 500-1000m ground sampling distance is too coarse for field level applications. In this study, we present a machine learning and STARFM based method for Landsat/MODIS ET fusion. The approach first downscales MODIS 8-day 1km ET (MOD16A2) to 30m based on eleven Landsat-derived indicators such as NDVI, EVI, NDWI etc on the cloud-free Landsat-available days using Random Forest approach. For the days when Landsat data are not available, downscaled ET is synthesized by MODIS and Landsat data fusion with STARFM and STI-FM approaches. The models are evaluated using in situ flux tower measurements at US-ARM and US-Twt AmeriFlux sites the United States. Results show that the downscaled 30m ET have good agreement with MODIS ET (RMSE=0.42-3.4mm/8days, rRMSE=3.2%-26%) and the downscaled ET have higher accuracy than MODIS ET when compared to in-situ measurements.

  2. Annual sums of carbon dioxide exchange over a heterogeneous urban landscape through machine learning based gap-filling

    Science.gov (United States)

    Menzer, Olaf; Meiring, Wendy; Kyriakidis, Phaedon C.; McFadden, Joseph P.

    2015-01-01

    A small, but growing, number of flux towers in urban environments measure surface-atmospheric exchanges of carbon dioxide by the eddy covariance method. As in all eddy covariance studies, obtaining annual sums of urban CO2 exchange requires imputation of data gaps due to low turbulence and non-stationary conditions, adverse weather, and instrument failures. Gap-filling approaches that are widely used for measurements from towers in natural vegetation are based on light and temperature response models. However, they do not account for key features of the urban environment including tower footprint heterogeneity and localized CO2 sources. Here, we present a novel gap-filling modeling framework that uses machine learning to select explanatory variables, such as continuous traffic counts and temporal variables, and then constrains models separately for spatially classified subsets of the data. We applied the modeling framework to a three year time series of measurements from a tall broadcast tower in a suburban neighborhood of Minneapolis-Saint Paul, Minnesota, USA. The gap-filling performance was similar to that reported for natural measurement sites, explaining 64% to 88% of the variability in the fluxes. Simulated carbon budgets were in good agreement with an ecophysiological bottom-up study at the same site. Total annual carbon dioxide flux sums for the tower site ranged from 1064 to 1382 g C m-2 yr-1, across different years and different gap-filling methods. Bias errors of annual sums resulting from gap-filling did not exceed 18 g C m-2 yr-1 and random uncertainties did not exceed ±44 g C m-2 yr-1 (or ±3.8% of the annual flux). Regardless of the gap-filling method used, the year-to-year differences in carbon exchange at this site were small. In contrast, the modeled annual sums of CO2 exchange differed by a factor of two depending on wind direction. This indicated that the modeled time series captured the spatial variability in both the biogenic and

  3. Machine learning-based analysis of MR radiomics can help to improve the diagnostic performance of PI-RADS v2 in clinically relevant prostate cancer

    International Nuclear Information System (INIS)

    Wang, Jing; Wu, Chen-Jiang; Zhang, Jing; Wang, Xiao-Ning; Zhang, Yu-Dong; Bao, Mei-Ling

    2017-01-01

    To investigate whether machine learning-based analysis of MR radiomics can help improve the performance PI-RADS v2 in clinically relevant prostate cancer (PCa). This IRB-approved study included 54 patients with PCa undergoing multi-parametric (mp) MRI before prostatectomy. Imaging analysis was performed on 54 tumours, 47 normal peripheral (PZ) and 48 normal transitional (TZ) zone based on histological-radiological correlation. Mp-MRI was scored via PI-RADS, and quantified by measuring radiomic features. Predictive model was developed using a novel support vector machine trained with: (i) radiomics, (ii) PI-RADS scores, (iii) radiomics and PI-RADS scores. Paired comparison was made via ROC analysis. For PCa versus normal TZ, the model trained with radiomics had a significantly higher area under the ROC curve (Az) (0.955 [95% CI 0.923-0.976]) than PI-RADS (Az: 0.878 [0.834-0.914], p < 0.001). The Az between them was insignificant for PCa versus PZ (0.972 [0.945-0.988] vs. 0.940 [0.905-0.965], p = 0.097). When radiomics was added, performance of PI-RADS was significantly improved for PCa versus PZ (Az: 0.983 [0.960-0.995]) and PCa versus TZ (Az: 0.968 [0.940-0.985]). Machine learning analysis of MR radiomics can help improve the performance of PI-RADS in clinically relevant PCa. (orig.)

  4. Machine learning-based analysis of MR radiomics can help to improve the diagnostic performance of PI-RADS v2 in clinically relevant prostate cancer

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Jing [CFDA, Center for Medical Device Evaluation, Beijing (China); Wu, Chen-Jiang; Zhang, Jing; Wang, Xiao-Ning; Zhang, Yu-Dong [First Affiliated Hospital with Nanjing Medical University, Department of Radiology, Nanjing, Jiangsu Province (China); Bao, Mei-Ling [First Affiliated Hospital with Nanjing Medical University, Department of Pathology, Nanjing (China)

    2017-10-15

    To investigate whether machine learning-based analysis of MR radiomics can help improve the performance PI-RADS v2 in clinically relevant prostate cancer (PCa). This IRB-approved study included 54 patients with PCa undergoing multi-parametric (mp) MRI before prostatectomy. Imaging analysis was performed on 54 tumours, 47 normal peripheral (PZ) and 48 normal transitional (TZ) zone based on histological-radiological correlation. Mp-MRI was scored via PI-RADS, and quantified by measuring radiomic features. Predictive model was developed using a novel support vector machine trained with: (i) radiomics, (ii) PI-RADS scores, (iii) radiomics and PI-RADS scores. Paired comparison was made via ROC analysis. For PCa versus normal TZ, the model trained with radiomics had a significantly higher area under the ROC curve (Az) (0.955 [95% CI 0.923-0.976]) than PI-RADS (Az: 0.878 [0.834-0.914], p < 0.001). The Az between them was insignificant for PCa versus PZ (0.972 [0.945-0.988] vs. 0.940 [0.905-0.965], p = 0.097). When radiomics was added, performance of PI-RADS was significantly improved for PCa versus PZ (Az: 0.983 [0.960-0.995]) and PCa versus TZ (Az: 0.968 [0.940-0.985]). Machine learning analysis of MR radiomics can help improve the performance of PI-RADS in clinically relevant PCa. (orig.)

  5. Error modeling for surrogates of dynamical systems using machine learning: Machine-learning-based error model for surrogates of dynamical systems

    International Nuclear Information System (INIS)

    Trehan, Sumeet; Carlberg, Kevin T.; Durlofsky, Louis J.

    2017-01-01

    A machine learning–based framework for modeling the error introduced by surrogate models of parameterized dynamical systems is proposed. The framework entails the use of high-dimensional regression techniques (eg, random forests, and LASSO) to map a large set of inexpensively computed “error indicators” (ie, features) produced by the surrogate model at a given time instance to a prediction of the surrogate-model error in a quantity of interest (QoI). This eliminates the need for the user to hand-select a small number of informative features. The methodology requires a training set of parameter instances at which the time-dependent surrogate-model error is computed by simulating both the high-fidelity and surrogate models. Using these training data, the method first determines regression-model locality (via classification or clustering) and subsequently constructs a “local” regression model to predict the time-instantaneous error within each identified region of feature space. We consider 2 uses for the resulting error model: (1) as a correction to the surrogate-model QoI prediction at each time instance and (2) as a way to statistically model arbitrary functions of the time-dependent surrogate-model error (eg, time-integrated errors). We then apply the proposed framework to model errors in reduced-order models of nonlinear oil-water subsurface flow simulations, with time-varying well-control (bottom-hole pressure) parameters. The reduced-order models used in this work entail application of trajectory piecewise linearization in conjunction with proper orthogonal decomposition. Moreover, when the first use of the method is considered, numerical experiments demonstrate consistent improvement in accuracy in the time-instantaneous QoI prediction relative to the original surrogate model, across a large number of test cases. When the second use is considered, results show that the proposed method provides accurate statistical predictions of the time- and well

  6. TU-H-CAMPUS-JeP2-03: Machine-Learning-Based Delineation Framework of GTV Regions of Solid and Ground Glass Opacity Lung Tumors at Datasets of Planning CT and PET/CT Images

    Energy Technology Data Exchange (ETDEWEB)

    Ikushima, K; Arimura, H; Jin, Z; Yabuuchi, H; Sasaki, T; Honda, H; Sasaki, M [Kyushu University, Fukuoka, Fukuoka (Japan); Kuwazuru, J [Saiseikai Fukuoka General Hospital, Fukuoka, Fukuoka (Japan); Shioyama, Y [Saga Heavy Ion Medical Accelerator in Tosu, Tosu, Saga (Japan)

    2016-06-15

    Purpose: In radiation treatment planning, delineation of gross tumor volume (GTV) is very important, because the GTVs affect the accuracies of radiation therapy procedure. To assist radiation oncologists in the delineation of GTV regions while treatment planning for lung cancer, we have proposed a machine-learning-based delineation framework of GTV regions of solid and ground glass opacity (GGO) lung tumors following by optimum contour selection (OCS) method. Methods: Our basic idea was to feed voxel-based image features around GTV contours determined by radiation oncologists into a machine learning classifier in the training step, after which the classifier produced the degree of GTV for each voxel in the testing step. Ten data sets of planning CT and PET/CT images were selected for this study. The support vector machine (SVM), which learned voxel-based features which include voxel value and magnitudes of image gradient vector that obtained from each voxel in the planning CT and PET/CT images, extracted initial GTV regions. The final GTV regions were determined using the OCS method that was able to select a global optimum object contour based on multiple active delineations with a level set method around the GTV. To evaluate the results of proposed framework for ten cases (solid:6, GGO:4), we used the three-dimensional Dice similarity coefficient (DSC), which denoted the degree of region similarity between the GTVs delineated by radiation oncologists and the proposed framework. Results: The proposed method achieved an average three-dimensional DSC of 0.81 for ten lung cancer patients, while a standardized uptake value-based method segmented GTV regions with the DSC of 0.43. The average DSCs for solid and GGO were 0.84 and 0.76, respectively, obtained by the proposed framework. Conclusion: The proposed framework with the support vector machine may be useful for assisting radiation oncologists in delineating solid and GGO lung tumors.

  7. Machine-Learning-Based Future Received Signal Strength Prediction Using Depth Images for mmWave Communications

    OpenAIRE

    Okamoto, Hironao; Nishio, Takayuki; Nakashima, Kota; Koda, Yusuke; Yamamoto, Koji; Morikura, Masahiro; Asai, Yusuke; Miyatake, Ryo

    2018-01-01

    This paper discusses a machine-learning (ML)-based future received signal strength (RSS) prediction scheme using depth camera images for millimeter-wave (mmWave) networks. The scheme provides the future RSS prediction of any mmWave links within the camera's view, including links where nodes are not transmitting frames. This enables network controllers to conduct network operations before line-of-sight path blockages degrade the RSS. Using the ML techniques, the prediction scheme automatically...

  8. Learning Algorithm of Boltzmann Machine Based on Spatial Monte Carlo Integration Method

    Directory of Open Access Journals (Sweden)

    Muneki Yasuda

    2018-04-01

    Full Text Available The machine learning techniques for Markov random fields are fundamental in various fields involving pattern recognition, image processing, sparse modeling, and earth science, and a Boltzmann machine is one of the most important models in Markov random fields. However, the inference and learning problems in the Boltzmann machine are NP-hard. The investigation of an effective learning algorithm for the Boltzmann machine is one of the most important challenges in the field of statistical machine learning. In this paper, we study Boltzmann machine learning based on the (first-order spatial Monte Carlo integration method, referred to as the 1-SMCI learning method, which was proposed in the author’s previous paper. In the first part of this paper, we compare the method with the maximum pseudo-likelihood estimation (MPLE method using a theoretical and a numerical approaches, and show the 1-SMCI learning method is more effective than the MPLE. In the latter part, we compare the 1-SMCI learning method with other effective methods, ratio matching and minimum probability flow, using a numerical experiment, and show the 1-SMCI learning method outperforms them.

  9. Parallelization of the ROOT Machine Learning Methods

    CERN Document Server

    Vakilipourtakalou, Pourya

    2016-01-01

    Today computation is an inseparable part of scientific research. Specially in Particle Physics when there is a classification problem like discrimination of Signals from Backgrounds originating from the collisions of particles. On the other hand, Monte Carlo simulations can be used in order to generate a known data set of Signals and Backgrounds based on theoretical physics. The aim of Machine Learning is to train some algorithms on known data set and then apply these trained algorithms to the unknown data sets. However, the most common framework for data analysis in Particle Physics is ROOT. In order to use Machine Learning methods, a Toolkit for Multivariate Data Analysis (TMVA) has been added to ROOT. The major consideration in this report is the parallelization of some TMVA methods, specially Cross-Validation and BDT.

  10. Methods of control the machining process

    Directory of Open Access Journals (Sweden)

    Yu.V. Petrakov

    2017-12-01

    Full Text Available Presents control methods, differentiated by the time of receipt of information used: a priori, a posteriori and current. When used a priori information to determine the mode of cutting is carried out by simulation the process of cutting allowance, where the shape of the workpiece and the details are presented in the form of wireframes. The office for current information provides for a system of adaptive control and modernization of CNC machine, where in the input of the unit shall be computed by using established optimization software. For the control by a posteriori information of the proposed method of correction of shape-generating trajectory in the second pass measurement surface of the workpiece formed by the first pass. Developed programs that automatically design the adjusted file for machining.

  11. PACE: Probabilistic Assessment for Contributor Estimation- A machine learning-based assessment of the number of contributors in DNA mixtures.

    Science.gov (United States)

    Marciano, Michael A; Adelman, Jonathan D

    2017-03-01

    The deconvolution of DNA mixtures remains one of the most critical challenges in the field of forensic DNA analysis. In addition, of all the data features required to perform such deconvolution, the number of contributors in the sample is widely considered the most important, and, if incorrectly chosen, the most likely to negatively influence the mixture interpretation of a DNA profile. Unfortunately, most current approaches to mixture deconvolution require the assumption that the number of contributors is known by the analyst, an assumption that can prove to be especially faulty when faced with increasingly complex mixtures of 3 or more contributors. In this study, we propose a probabilistic approach for estimating the number of contributors in a DNA mixture that leverages the strengths of machine learning. To assess this approach, we compare classification performances of six machine learning algorithms and evaluate the model from the top-performing algorithm against the current state of the art in the field of contributor number classification. Overall results show over 98% accuracy in identifying the number of contributors in a DNA mixture of up to 4 contributors. Comparative results showed 3-person mixtures had a classification accuracy improvement of over 6% compared to the current best-in-field methodology, and that 4-person mixtures had a classification accuracy improvement of over 20%. The Probabilistic Assessment for Contributor Estimation (PACE) also accomplishes classification of mixtures of up to 4 contributors in less than 1s using a standard laptop or desktop computer. Considering the high classification accuracy rates, as well as the significant time commitment required by the current state of the art model versus seconds required by a machine learning-derived model, the approach described herein provides a promising means of estimating the number of contributors and, subsequently, will lead to improved DNA mixture interpretation. Copyright © 2016

  12. Machine Learning Methods for Production Cases Analysis

    Science.gov (United States)

    Mokrova, Nataliya V.; Mokrov, Alexander M.; Safonova, Alexandra V.; Vishnyakov, Igor V.

    2018-03-01

    Approach to analysis of events occurring during the production process were proposed. Described machine learning system is able to solve classification tasks related to production control and hazard identification at an early stage. Descriptors of the internal production network data were used for training and testing of applied models. k-Nearest Neighbors and Random forest methods were used to illustrate and analyze proposed solution. The quality of the developed classifiers was estimated using standard statistical metrics, such as precision, recall and accuracy.

  13. Identification of human flap endonuclease 1 (FEN1) inhibitors using a machine learning based consensus virtual screening.

    Science.gov (United States)

    Deshmukh, Amit Laxmikant; Chandra, Sharat; Singh, Deependra Kumar; Siddiqi, Mohammad Imran; Banerjee, Dibyendu

    2017-07-25

    Human Flap endonuclease1 (FEN1) is an enzyme that is indispensable for DNA replication and repair processes and inhibition of its Flap cleavage activity results in increased cellular sensitivity to DNA damaging agents (cisplatin, temozolomide, MMS, etc.), with the potential to improve cancer prognosis. Reports of the high expression levels of FEN1 in several cancer cells support the idea that FEN1 inhibitors may target cancer cells with minimum side effects to normal cells. In this study, we used large publicly available, high-throughput screening data of small molecule compounds targeted against FEN1. Two machine learning algorithms, Support Vector Machine (SVM) and Random Forest (RF), were utilized to generate four classification models from huge PubChem bioassay data containing probable FEN1 inhibitors and non-inhibitors. We also investigated the influence of randomly selected Zinc-database compounds as negative data on the outcome of classification modelling. The results show that the SVM model with inactive compounds was superior to RF with Matthews's correlation coefficient (MCC) of 0.67 for the test set. A Maybridge database containing approximately 53 000 compounds was screened and top ranking 5 compounds were selected for enzyme and cell-based in vitro screening. The compound JFD00950 was identified as a novel FEN1 inhibitor with in vitro inhibition of flap cleavage activity as well as cytotoxic activity against a colon cancer cell line, DLD-1.

  14. Automatic machine-learning based identification of jogging periods from accelerometer measurements of adolescents under field conditions.

    Science.gov (United States)

    Zdravevski, Eftim; Risteska Stojkoska, Biljana; Standl, Marie; Schulz, Holger

    2017-01-01

    Assessment of health benefits associated with physical activity depend on the activity duration, intensity and frequency, therefore their correct identification is very valuable and important in epidemiological and clinical studies. The aims of this study are: to develop an algorithm for automatic identification of intended jogging periods; and to assess whether the identification performance is improved when using two accelerometers at the hip and ankle, compared to when using only one at either position. The study used diarized jogging periods and the corresponding accelerometer data from thirty-nine, 15-year-old adolescents, collected under field conditions, as part of the GINIplus study. The data was obtained from two accelerometers placed at the hip and ankle. Automated feature engineering technique was performed to extract features from the raw accelerometer readings and to select a subset of the most significant features. Four machine learning algorithms were used for classification: Logistic regression, Support Vector Machines, Random Forest and Extremely Randomized Trees. Classification was performed using only data from the hip accelerometer, using only data from ankle accelerometer and using data from both accelerometers. The reported jogging periods were verified by visual inspection and used as golden standard. After the feature selection and tuning of the classification algorithms, all options provided a classification accuracy of at least 0.99, independent of the applied segmentation strategy with sliding windows of either 60s or 180s. The best matching ratio, i.e. the length of correctly identified jogging periods related to the total time including the missed ones, was up to 0.875. It could be additionally improved up to 0.967 by application of post-classification rules, which considered the duration of breaks and jogging periods. There was no obvious benefit of using two accelerometers, rather almost the same performance could be achieved from

  15. Automatic machine-learning based identification of jogging periods from accelerometer measurements of adolescents under field conditions.

    Directory of Open Access Journals (Sweden)

    Eftim Zdravevski

    Full Text Available Assessment of health benefits associated with physical activity depend on the activity duration, intensity and frequency, therefore their correct identification is very valuable and important in epidemiological and clinical studies. The aims of this study are: to develop an algorithm for automatic identification of intended jogging periods; and to assess whether the identification performance is improved when using two accelerometers at the hip and ankle, compared to when using only one at either position.The study used diarized jogging periods and the corresponding accelerometer data from thirty-nine, 15-year-old adolescents, collected under field conditions, as part of the GINIplus study. The data was obtained from two accelerometers placed at the hip and ankle. Automated feature engineering technique was performed to extract features from the raw accelerometer readings and to select a subset of the most significant features. Four machine learning algorithms were used for classification: Logistic regression, Support Vector Machines, Random Forest and Extremely Randomized Trees. Classification was performed using only data from the hip accelerometer, using only data from ankle accelerometer and using data from both accelerometers.The reported jogging periods were verified by visual inspection and used as golden standard. After the feature selection and tuning of the classification algorithms, all options provided a classification accuracy of at least 0.99, independent of the applied segmentation strategy with sliding windows of either 60s or 180s. The best matching ratio, i.e. the length of correctly identified jogging periods related to the total time including the missed ones, was up to 0.875. It could be additionally improved up to 0.967 by application of post-classification rules, which considered the duration of breaks and jogging periods. There was no obvious benefit of using two accelerometers, rather almost the same performance could be

  16. Multilevel Cognitive Machine-Learning-Based Concept for Artificial Awareness: Application to Humanoid Robot Awareness Using Visual Saliency

    Directory of Open Access Journals (Sweden)

    Kurosh Madani

    2012-01-01

    Full Text Available As part of “intelligence,” the “awareness” is the state or ability to perceive, feel, or be mindful of events, objects, or sensory patterns: in other words, to be conscious of the surrounding environment and its interactions. Inspired by early-ages human skills developments and especially by early-ages awareness maturation, the present paper accosts the robots intelligence from a different slant directing the attention to combining both “cognitive” and “perceptual” abilities. Within such a slant, the machine (robot shrewdness is constructed on the basis of a multilevel cognitive concept attempting to handle complex artificial behaviors. The intended complex behavior is the autonomous discovering of objects by robot exploring an unknown environment: in other words, proffering the robot autonomy and awareness in and about unknown backdrop.

  17. Multitask Learning-Based Security Event Forecast Methods for Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Hui He

    2016-01-01

    Full Text Available Wireless sensor networks have strong dynamics and uncertainty, including network topological changes, node disappearance or addition, and facing various threats. First, to strengthen the detection adaptability of wireless sensor networks to various security attacks, a region similarity multitask-based security event forecast method for wireless sensor networks is proposed. This method performs topology partitioning on a large-scale sensor network and calculates the similarity degree among regional subnetworks. The trend of unknown network security events can be predicted through multitask learning of the occurrence and transmission characteristics of known network security events. Second, in case of lacking regional data, the quantitative trend of unknown regional network security events can be calculated. This study introduces a sensor network security event forecast method named Prediction Network Security Incomplete Unmarked Data (PNSIUD method to forecast missing attack data in the target region according to the known partial data in similar regions. Experimental results indicate that for an unknown security event forecast the forecast accuracy and effects of the similarity forecast algorithm are better than those of single-task learning method. At the same time, the forecast accuracy of the PNSIUD method is better than that of the traditional support vector machine method.

  18. Finding protein sites using machine learning methods

    Directory of Open Access Journals (Sweden)

    Jaime Leonardo Bobadilla Molina

    2003-07-01

    Full Text Available The increasing amount of protein three-dimensional (3D structures determined by x-ray and NMR technologies as well as structures predicted by computational methods results in the need for automated methods to provide inital annotations. We have developed a new method for recognizing sites in three-dimensional protein structures. Our method is based on a previosly reported algorithm for creating descriptions of protein microenviroments using physical and chemical properties at multiple levels of detail. The recognition method takes three inputs: 1. A set of control nonsites that share some structural or functional role. 2. A set of control nonsites that lack this role. 3. A single query site. A support vector machine classifier is built using feature vectors where each component represents a property in a given volume. Validation against an independent test set shows that this recognition approach has high sensitivity and specificity. We also describe the results of scanning four calcium binding proteins (with the calcium removed using a three dimensional grid of probe points at 1.25 angstrom spacing. The system finds the sites in the proteins giving points at or near the blinding sites. Our results show that property based descriptions along with support vector machines can be used for recognizing protein sites in unannotated structures.

  19. Study of on-machine error identification and compensation methods for micro machine tools

    International Nuclear Information System (INIS)

    Wang, Shih-Ming; Yu, Han-Jen; Lee, Chun-Yi; Chiu, Hung-Sheng

    2016-01-01

    Micro machining plays an important role in the manufacturing of miniature products which are made of various materials with complex 3D shapes and tight machining tolerance. To further improve the accuracy of a micro machining process without increasing the manufacturing cost of a micro machine tool, an effective machining error measurement method and a software-based compensation method are essential. To avoid introducing additional errors caused by the re-installment of the workpiece, the measurement and compensation method should be on-machine conducted. In addition, because the contour of a miniature workpiece machined with a micro machining process is very tiny, the measurement method should be non-contact. By integrating the image re-constructive method, camera pixel correction, coordinate transformation, the error identification algorithm, and trajectory auto-correction method, a vision-based error measurement and compensation method that can on-machine inspect the micro machining errors and automatically generate an error-corrected numerical control (NC) program for error compensation was developed in this study. With the use of the Canny edge detection algorithm and camera pixel calibration, the edges of the contour of a machined workpiece were identified and used to re-construct the actual contour of the work piece. The actual contour was then mapped to the theoretical contour to identify the actual cutting points and compute the machining errors. With the use of a moving matching window and calculation of the similarity between the actual and theoretical contour, the errors between the actual cutting points and theoretical cutting points were calculated and used to correct the NC program. With the use of the error-corrected NC program, the accuracy of a micro machining process can be effectively improved. To prove the feasibility and effectiveness of the proposed methods, micro-milling experiments on a micro machine tool were conducted, and the results

  20. Discrimination of Brazilian propolis according to the seasoning using chemometrics and machine learning based on UV-Vis scanning data.

    Science.gov (United States)

    Tomazzoli, Maíra M; Pai Neto, Remi D; Moresco, Rodolfo; Westphal, Larissa; Zeggio, Amelia R S; Specht, Leandro; Costa, Christopher; Rocha, Miguel; Maraschin, Marcelo

    2015-12-01

    Propolis is a chemically complex biomass produced by honeybees (Apis mellifera) from plant resins added of salivary enzymes, beeswax, and pollen. The biological activities described for propolis were also identified for donor plant's resin, but a big challenge for the standardization of the chemical composition and biological effects of propolis remains on a better understanding of the influence of seasonality on the chemical constituents of that raw material. Since propolis quality depends, among other variables, on the local flora which is strongly influenced by (a)biotic factors over the seasons, to unravel the harvest season effect on the propolis chemical profile is an issue of recognized importance. For that, fast, cheap, and robust analytical techniques seem to be the best choice for large scale quality control processes in the most demanding markets, e.g., human health applications. For that, UV-Visible (UV-Vis) scanning spectrophotometry of hydroalcoholic extracts (HE) of seventy-three propolis samples, collected over the seasons in 2014 (summer, spring, autumn, and winter) and 2015 (summer and autumn) in Southern Brazil was adopted. Further machine learning and chemometrics techniques were applied to the UV-Vis dataset aiming to gain insights as to the seasonality effect on the claimed chemical heterogeneity of propolis samples determined by changes in the flora of the geographic region under study. Descriptive and classification models were built following a chemometric approach, i.e. principal component analysis (PCA) and hierarchical clustering analysis (HCA) supported by scripts written in the R language. The UV-Vis profiles associated with chemometric analysis allowed identifying a typical pattern in propolis samples collected in the summer. Importantly, the discrimination based on PCA could be improved by using the dataset of the fingerprint region of phenolic compounds ( λ= 280-400 ηm), suggesting that besides the biological activities of those

  1. Machine Learning-Based Classification of 38 Years of Spine-Related Literature Into 100 Research Topics.

    Science.gov (United States)

    Sing, David C; Metz, Lionel N; Dudli, Stefan

    2017-06-01

    Retrospective review. To identify the top 100 spine research topics. Recent advances in "machine learning," or computers learning without explicit instructions, have yielded broad technological advances. Topic modeling algorithms can be applied to large volumes of text to discover quantifiable themes and trends. Abstracts were extracted from the National Library of Medicine PubMed database from five prominent peer-reviewed spine journals (European Spine Journal [ESJ], The Spine Journal [SpineJ], Spine, Journal of Spinal Disorders and Techniques [JSDT], Journal of Neurosurgery: Spine [JNS]). Each abstract was entered into a latent Dirichlet allocation model specified to discover 100 topics, resulting in each abstract being assigned a probability of belonging in a topic. Topics were named using the five most frequently appearing terms within that topic. Significance of increasing ("hot") or decreasing ("cold") topic popularity over time was evaluated with simple linear regression. From 1978 to 2015, 25,805 spine-related research articles were extracted and classified into 100 topics. Top two most published topics included "clinical, surgeons, guidelines, information, care" (n = 496 articles) and "pain, back, low, treatment, chronic" (424). Top two hot trends included "disc, cervical, replacement, level, arthroplasty" (+0.05%/yr, P < 0.001), and "minimally, invasive, approach, technique" (+0.05%/yr, P < 0.001). By journal, the most published topics were ESJ-"operative, surgery, postoperative, underwent, preoperative"; SpineJ-"clinical, surgeons, guidelines, information, care"; Spine-"pain, back, low, treatment, chronic"; JNS- "tumor, lesions, rare, present, diagnosis"; JSDT-"cervical, anterior, plate, fusion, ACDF." Topics discovered through latent Dirichlet allocation modeling represent unbiased meaningful themes relevant to spine care. Topic dynamics can provide historical context and direction for future research for aspiring investigators and trainees

  2. A confidence metric for using neurobiological feedback in actor-critic reinforcement learning based brain-machine interfaces

    Directory of Open Access Journals (Sweden)

    Noeline Wilhelmina Prins

    2014-05-01

    Full Text Available Brain-Machine Interfaces (BMIs can be used to restore function in people living with paralysis. Current BMIs require extensive calibration that increase the set-up times and external inputs for decoder training that may be difficult to produce in paralyzed individuals. Both these factors have presented challenges in transitioning the technology from research environments to activities of daily living (ADL. For BMIs to be seamlessly used in ADL, these issues should be handled with minimal external input thus reducing the need for a technician/caregiver to calibrate the system. Reinforcement Learning (RL based BMIs are a good tool to be used when there is no external training signal and can provide an adaptive modality to train BMI decoders. However, RL based BMIs are sensitive to the feedback provided to adapt the BMI. In actor-critic BMIs, this feedback is provided by the critic and the overall system performance is limited by the critic accuracy. In this work, we developed an adaptive BMI that could handle inaccuracies in the critic feedback in an effort to produce more accurate RL based BMIs. We developed a confidence measure, which indicated how appropriate the feedback is for updating the decoding parameters of the actor. The results show that with the new update formulation, the critic accuracy is no longer a limiting factor for the overall performance. We tested and validated the system on three different data sets: synthetic data generated by an Izhikevich neural spiking model, synthetic data with a Gaussian noise distribution, and data collected from a non-human primate engaged in a reaching task. All results indicated that the system with the critic confidence built in always outperformed the system without the critic confidence. Results of this study suggest the potential application of the technique in developing an autonomous BMI that does not need an external signal for training or extensive calibration.

  3. Evaluating Machine Learning-Based Automated Personalized Daily Step Goals Delivered Through a Mobile Phone App: Randomized Controlled Trial.

    Science.gov (United States)

    Zhou, Mo; Fukuoka, Yoshimi; Mintz, Yonatan; Goldberg, Ken; Kaminsky, Philip; Flowers, Elena; Aswani, Anil

    2018-01-25

    Growing evidence shows that fixed, nonpersonalized daily step goals can discourage individuals, resulting in unchanged or even reduced physical activity. The aim of this randomized controlled trial (RCT) was to evaluate the efficacy of an automated mobile phone-based personalized and adaptive goal-setting intervention using machine learning as compared with an active control with steady daily step goals of 10,000. In this 10-week RCT, 64 participants were recruited via email announcements and were required to attend an initial in-person session. The participants were randomized into either the intervention or active control group with a one-to-one ratio after a run-in period for data collection. A study-developed mobile phone app (which delivers daily step goals using push notifications and allows real-time physical activity monitoring) was installed on each participant's mobile phone, and participants were asked to keep their phone in a pocket throughout the entire day. Through the app, the intervention group received fully automated adaptively personalized daily step goals, and the control group received constant step goals of 10,000 steps per day. Daily step count was objectively measured by the study-developed mobile phone app. The mean (SD) age of participants was 41.1 (11.3) years, and 83% (53/64) of participants were female. The baseline demographics between the 2 groups were similar (P>.05). Participants in the intervention group (n=34) had a decrease in mean (SD) daily step count of 390 (490) steps between run-in and 10 weeks, compared with a decrease of 1350 (420) steps among control participants (n=30; P=.03). The net difference in daily steps between the groups was 960 steps (95% CI 90-1830 steps). Both groups had a decrease in daily step count between run-in and 10 weeks because interventions were also provided during run-in and no natural baseline was collected. The results showed the short-term efficacy of this intervention, which should be formally

  4. Computerization of Hungarian reforestation manual with machine learning methods

    Science.gov (United States)

    Czimber, Kornél; Gálos, Borbála; Mátyás, Csaba; Bidló, András; Gribovszki, Zoltán

    2017-04-01

    Hungarian forests are highly sensitive to the changing climate, especially to the available precipitation amount. Over the past two decades several drought damages were observed for tree species which are in the lower xeric limit of their distribution. From year to year these affected forest stands become more difficult to reforest with the same native species because these are not able to adapt to the increasing probability of droughts. The climate related parameter set of the Hungarian forest stand database needs updates. Air humidity that was formerly used to define the forest climate zones is not measured anymore and its value based on climate model outputs is highly uncertain. The aim was to develop a novel computerized and objective method to describe the species-specific climate conditions that is essential for survival, growth and optimal production of the forest ecosystems. The method is expected to project the species spatial distribution until 2100 on the basis of regional climate model simulations. Until now, Hungarian forest managers have been using a carefully edited spreadsheet for reforestation purposes. Applying binding regulations this spreadsheet prescribes the stand-forming and admixed tree species and their expected growth rate for each forest site types. We are going to present a new machine learning based method to replace the former spreadsheet. We took into great consideration of various methods, such as maximum likelihood, Bayesian networks, Fuzzy logic. The method calculates distributions, setups classification, which can be validated and modified by experts if necessary. Projected climate change conditions makes necessary to include into this system an additional climate zone that does not exist in our region now, as well as new options for potential tree species. In addition to or instead of the existing ones, the influence of further limiting parameters (climatic extremes, soil water retention) are also investigated. Results will be

  5. Machine Learning-Based App for Self-Evaluation of Teacher-Specific Instructional Style and Tools

    Science.gov (United States)

    Duzhin, Fedor; Gustafsson, Anders

    2018-01-01

    Course instructors need to assess the efficacy of their teaching methods, but experiments in education are seldom politically, administratively, or ethically feasible. Quasi-experimental tools, on the other hand, are often problematic, as they are typically too complicated to be of widespread use to educators and may suffer from selection bias…

  6. Machine learning methods for metabolic pathway prediction

    Directory of Open Access Journals (Sweden)

    Karp Peter D

    2010-01-01

    Full Text Available Abstract Background A key challenge in systems biology is the reconstruction of an organism's metabolic network from its genome sequence. One strategy for addressing this problem is to predict which metabolic pathways, from a reference database of known pathways, are present in the organism, based on the annotated genome of the organism. Results To quantitatively validate methods for pathway prediction, we developed a large "gold standard" dataset of 5,610 pathway instances known to be present or absent in curated metabolic pathway databases for six organisms. We defined a collection of 123 pathway features, whose information content we evaluated with respect to the gold standard. Feature data were used as input to an extensive collection of machine learning (ML methods, including naïve Bayes, decision trees, and logistic regression, together with feature selection and ensemble methods. We compared the ML methods to the previous PathoLogic algorithm for pathway prediction using the gold standard dataset. We found that ML-based prediction methods can match the performance of the PathoLogic algorithm. PathoLogic achieved an accuracy of 91% and an F-measure of 0.786. The ML-based prediction methods achieved accuracy as high as 91.2% and F-measure as high as 0.787. The ML-based methods output a probability for each predicted pathway, whereas PathoLogic does not, which provides more information to the user and facilitates filtering of predicted pathways. Conclusions ML methods for pathway prediction perform as well as existing methods, and have qualitative advantages in terms of extensibility, tunability, and explainability. More advanced prediction methods and/or more sophisticated input features may improve the performance of ML methods. However, pathway prediction performance appears to be limited largely by the ability to correctly match enzymes to the reactions they catalyze based on genome annotations.

  7. Machine learning methods for metabolic pathway prediction

    Science.gov (United States)

    2010-01-01

    Background A key challenge in systems biology is the reconstruction of an organism's metabolic network from its genome sequence. One strategy for addressing this problem is to predict which metabolic pathways, from a reference database of known pathways, are present in the organism, based on the annotated genome of the organism. Results To quantitatively validate methods for pathway prediction, we developed a large "gold standard" dataset of 5,610 pathway instances known to be present or absent in curated metabolic pathway databases for six organisms. We defined a collection of 123 pathway features, whose information content we evaluated with respect to the gold standard. Feature data were used as input to an extensive collection of machine learning (ML) methods, including naïve Bayes, decision trees, and logistic regression, together with feature selection and ensemble methods. We compared the ML methods to the previous PathoLogic algorithm for pathway prediction using the gold standard dataset. We found that ML-based prediction methods can match the performance of the PathoLogic algorithm. PathoLogic achieved an accuracy of 91% and an F-measure of 0.786. The ML-based prediction methods achieved accuracy as high as 91.2% and F-measure as high as 0.787. The ML-based methods output a probability for each predicted pathway, whereas PathoLogic does not, which provides more information to the user and facilitates filtering of predicted pathways. Conclusions ML methods for pathway prediction perform as well as existing methods, and have qualitative advantages in terms of extensibility, tunability, and explainability. More advanced prediction methods and/or more sophisticated input features may improve the performance of ML methods. However, pathway prediction performance appears to be limited largely by the ability to correctly match enzymes to the reactions they catalyze based on genome annotations. PMID:20064214

  8. Methods and systems for micro machines

    Energy Technology Data Exchange (ETDEWEB)

    Stalford, Harold L.

    2018-03-06

    A micro machine may be in or less than the micrometer domain. The micro machine may include a micro actuator and a micro shaft coupled to the micro actuator. The micro shaft is operable to be driven by the micro actuator. A tool is coupled to the micro shaft and is operable to perform work in response to at least motion of the micro shaft.

  9. MLViS: A Web Tool for Machine Learning-Based Virtual Screening in Early-Phase of Drug Discovery and Development.

    Science.gov (United States)

    Korkmaz, Selcuk; Zararsiz, Gokmen; Goksuluk, Dincer

    2015-01-01

    Virtual screening is an important step in early-phase of drug discovery process. Since there are thousands of compounds, this step should be both fast and effective in order to distinguish drug-like and nondrug-like molecules. Statistical machine learning methods are widely used in drug discovery studies for classification purpose. Here, we aim to develop a new tool, which can classify molecules as drug-like and nondrug-like based on various machine learning methods, including discriminant, tree-based, kernel-based, ensemble and other algorithms. To construct this tool, first, performances of twenty-three different machine learning algorithms are compared by ten different measures, then, ten best performing algorithms have been selected based on principal component and hierarchical cluster analysis results. Besides classification, this application has also ability to create heat map and dendrogram for visual inspection of the molecules through hierarchical cluster analysis. Moreover, users can connect the PubChem database to download molecular information and to create two-dimensional structures of compounds. This application is freely available through www.biosoft.hacettepe.edu.tr/MLViS/.

  10. An Overview of Deep Learning Based Methods for Unsupervised and Semi-Supervised Anomaly Detection in Videos

    Directory of Open Access Journals (Sweden)

    B. Ravi Kiran

    2018-02-01

    Full Text Available Videos represent the primary source of information for surveillance applications. Video material is often available in large quantities but in most cases it contains little or no annotation for supervised learning. This article reviews the state-of-the-art deep learning based methods for video anomaly detection and categorizes them based on the type of model and criteria of detection. We also perform simple studies to understand the different approaches and provide the criteria of evaluation for spatio-temporal anomaly detection.

  11. A Method for Design of Modular Reconfigurable Machine Tools

    Directory of Open Access Journals (Sweden)

    Zhengyi Xu

    2017-02-01

    Full Text Available Presented in this paper is a method for the design of modular reconfigurable machine tools (MRMTs. An MRMT is capable of using a minimal number of modules through reconfiguration to perform the required machining tasks for a family of parts. The proposed method consists of three steps: module identification, module determination, and layout synthesis. In the first step, the module components are collected from a family of general-purpose machines to establish a module library. In the second step, for a given family of parts to be machined, a set of needed modules are selected from the module library to construct a desired reconfigurable machine tool. In the third step, a final machine layout is decided though evaluation by considering a number of performance indices. Based on this method, a software package has been developed that can design an MRMT for a given part family.

  12. Methods and apparatus for controlling rotary machines

    Science.gov (United States)

    Bagepalli, Bharat Sampathkumaran [Niskayuna, NY; Jansen, Patrick Lee [Scotia, NY; Barnes, Gary R [Delanson, NY; Fric, Thomas Frank [Greer, SC; Lyons, James Patrick Francis [Niskayuna, NY; Pierce, Kirk Gee [Simpsonville, SC; Holley, William Edwin [Greer, SC; Barbu, Corneliu [Guilderland, NY

    2009-09-01

    A control system for a rotary machine is provided. The rotary machine has at least one rotating member and at least one substantially stationary member positioned such that a clearance gap is defined between a portion of the rotating member and a portion of the substantially stationary member. The control system includes at least one clearance gap dimension measurement apparatus and at least one clearance gap adjustment assembly. The adjustment assembly is coupled in electronic data communication with the measurement apparatus. The control system is configured to process a clearance gap dimension signal and modulate the clearance gap dimension.

  13. Application of machine learning methods in bioinformatics

    Science.gov (United States)

    Yang, Haoyu; An, Zheng; Zhou, Haotian; Hou, Yawen

    2018-05-01

    Faced with the development of bioinformatics, high-throughput genomic technology have enabled biology to enter the era of big data. [1] Bioinformatics is an interdisciplinary, including the acquisition, management, analysis, interpretation and application of biological information, etc. It derives from the Human Genome Project. The field of machine learning, which aims to develop computer algorithms that improve with experience, holds promise to enable computers to assist humans in the analysis of large, complex data sets.[2]. This paper analyzes and compares various algorithms of machine learning and their applications in bioinformatics.

  14. Fault Detection for Nonlinear Process With Deterministic Disturbances: A Just-In-Time Learning Based Data Driven Method.

    Science.gov (United States)

    Yin, Shen; Gao, Huijun; Qiu, Jianbin; Kaynak, Okyay

    2017-11-01

    Data-driven fault detection plays an important role in industrial systems due to its applicability in case of unknown physical models. In fault detection, disturbances must be taken into account as an inherent characteristic of processes. Nevertheless, fault detection for nonlinear processes with deterministic disturbances still receive little attention, especially in data-driven field. To solve this problem, a just-in-time learning-based data-driven (JITL-DD) fault detection method for nonlinear processes with deterministic disturbances is proposed in this paper. JITL-DD employs JITL scheme for process description with local model structures to cope with processes dynamics and nonlinearity. The proposed method provides a data-driven fault detection solution for nonlinear processes with deterministic disturbances, and owns inherent online adaptation and high accuracy of fault detection. Two nonlinear systems, i.e., a numerical example and a sewage treatment process benchmark, are employed to show the effectiveness of the proposed method.

  15. Improved Saturated Hydraulic Conductivity Pedotransfer Functions Using Machine Learning Methods

    Science.gov (United States)

    Araya, S. N.; Ghezzehei, T. A.

    2017-12-01

    Saturated hydraulic conductivity (Ks) is one of the fundamental hydraulic properties of soils. Its measurement, however, is cumbersome and instead pedotransfer functions (PTFs) are often used to estimate it. Despite a lot of progress over the years, generic PTFs that estimate hydraulic conductivity generally don't have a good performance. We develop significantly improved PTFs by applying state of the art machine learning techniques coupled with high-performance computing on a large database of over 20,000 soils—USKSAT and the Florida Soil Characterization databases. We compared the performance of four machine learning algorithms (k-nearest neighbors, gradient boosted model, support vector machine, and relevance vector machine) and evaluated the relative importance of several soil properties in explaining Ks. An attempt is also made to better account for soil structural properties; we evaluated the importance of variables derived from transformations of soil water retention characteristics and other soil properties. The gradient boosted models gave the best performance with root mean square errors less than 0.7 and mean errors in the order of 0.01 on a log scale of Ks [cm/h]. The effective particle size, D10, was found to be the single most important predictor. Other important predictors included percent clay, bulk density, organic carbon percent, coefficient of uniformity and values derived from water retention characteristics. Model performances were consistently better for Ks values greater than 10 cm/h. This study maximizes the extraction of information from a large database to develop generic machine learning based PTFs to estimate Ks. The study also evaluates the importance of various soil properties and their transformations in explaining Ks.

  16. Machine Learning Methods to Predict Diabetes Complications.

    Science.gov (United States)

    Dagliati, Arianna; Marini, Simone; Sacchi, Lucia; Cogni, Giulia; Teliti, Marsida; Tibollo, Valentina; De Cata, Pasquale; Chiovato, Luca; Bellazzi, Riccardo

    2018-03-01

    One of the areas where Artificial Intelligence is having more impact is machine learning, which develops algorithms able to learn patterns and decision rules from data. Machine learning algorithms have been embedded into data mining pipelines, which can combine them with classical statistical strategies, to extract knowledge from data. Within the EU-funded MOSAIC project, a data mining pipeline has been used to derive a set of predictive models of type 2 diabetes mellitus (T2DM) complications based on electronic health record data of nearly one thousand patients. Such pipeline comprises clinical center profiling, predictive model targeting, predictive model construction and model validation. After having dealt with missing data by means of random forest (RF) and having applied suitable strategies to handle class imbalance, we have used Logistic Regression with stepwise feature selection to predict the onset of retinopathy, neuropathy, or nephropathy, at different time scenarios, at 3, 5, and 7 years from the first visit at the Hospital Center for Diabetes (not from the diagnosis). Considered variables are gender, age, time from diagnosis, body mass index (BMI), glycated hemoglobin (HbA1c), hypertension, and smoking habit. Final models, tailored in accordance with the complications, provided an accuracy up to 0.838. Different variables were selected for each complication and time scenario, leading to specialized models easy to translate to the clinical practice.

  17. Studying depression using imaging and machine learning methods

    Directory of Open Access Journals (Sweden)

    Meenal J. Patel

    2016-01-01

    Full Text Available Depression is a complex clinical entity that can pose challenges for clinicians regarding both accurate diagnosis and effective timely treatment. These challenges have prompted the development of multiple machine learning methods to help improve the management of this disease. These methods utilize anatomical and physiological data acquired from neuroimaging to create models that can identify depressed patients vs. non-depressed patients and predict treatment outcomes. This article (1 presents a background on depression, imaging, and machine learning methodologies; (2 reviews methodologies of past studies that have used imaging and machine learning to study depression; and (3 suggests directions for future depression-related studies.

  18. Studying depression using imaging and machine learning methods.

    Science.gov (United States)

    Patel, Meenal J; Khalaf, Alexander; Aizenstein, Howard J

    2016-01-01

    Depression is a complex clinical entity that can pose challenges for clinicians regarding both accurate diagnosis and effective timely treatment. These challenges have prompted the development of multiple machine learning methods to help improve the management of this disease. These methods utilize anatomical and physiological data acquired from neuroimaging to create models that can identify depressed patients vs. non-depressed patients and predict treatment outcomes. This article (1) presents a background on depression, imaging, and machine learning methodologies; (2) reviews methodologies of past studies that have used imaging and machine learning to study depression; and (3) suggests directions for future depression-related studies.

  19. Dense Medium Machine Processing Method for Palm Kernel/ Shell ...

    African Journals Online (AJOL)

    ADOWIE PERE

    Cracked palm kernel is a mixture of kernels, broken shells, dusts and other impurities. In ... machine processing method using dense medium, a separator, a shell collector and a kernel .... efficiency, ease of maintenance and uniformity of.

  20. NetiNeti: discovery of scientific names from text using machine learning methods

    Directory of Open Access Journals (Sweden)

    Akella Lakshmi

    2012-08-01

    Full Text Available Abstract Background A scientific name for an organism can be associated with almost all biological data. Name identification is an important step in many text mining tasks aiming to extract useful information from biological, biomedical and biodiversity text sources. A scientific name acts as an important metadata element to link biological information. Results We present NetiNeti (Name Extraction from Textual Information-Name Extraction for Taxonomic Indexing, a machine learning based approach for recognition of scientific names including the discovery of new species names from text that will also handle misspellings, OCR errors and other variations in names. The system generates candidate names using rules for scientific names and applies probabilistic machine learning methods to classify names based on structural features of candidate names and features derived from their contexts. NetiNeti can also disambiguate scientific names from other names using the contextual information. We evaluated NetiNeti on legacy biodiversity texts and biomedical literature (MEDLINE. NetiNeti performs better (precision = 98.9% and recall = 70.5% compared to a popular dictionary based approach (precision = 97.5% and recall = 54.3% on a 600-page biodiversity book that was manually marked by an annotator. On a small set of PubMed Central’s full text articles annotated with scientific names, the precision and recall values are 98.5% and 96.2% respectively. NetiNeti found more than 190,000 unique binomial and trinomial names in more than 1,880,000 PubMed records when used on the full MEDLINE database. NetiNeti also successfully identifies almost all of the new species names mentioned within web pages. Conclusions We present NetiNeti, a machine learning based approach for identification and discovery of scientific names. The system implementing the approach can be accessed at http://namefinding.ubio.org.

  1. In silico machine learning methods in drug development.

    Science.gov (United States)

    Dobchev, Dimitar A; Pillai, Girinath G; Karelson, Mati

    2014-01-01

    Machine learning (ML) computational methods for predicting compounds with pharmacological activity, specific pharmacodynamic and ADMET (absorption, distribution, metabolism, excretion and toxicity) properties are being increasingly applied in drug discovery and evaluation. Recently, machine learning techniques such as artificial neural networks, support vector machines and genetic programming have been explored for predicting inhibitors, antagonists, blockers, agonists, activators and substrates of proteins related to specific therapeutic targets. These methods are particularly useful for screening compound libraries of diverse chemical structures, "noisy" and high-dimensional data to complement QSAR methods, and in cases of unavailable receptor 3D structure to complement structure-based methods. A variety of studies have demonstrated the potential of machine-learning methods for predicting compounds as potential drug candidates. The present review is intended to give an overview of the strategies and current progress in using machine learning methods for drug design and the potential of the respective model development tools. We also regard a number of applications of the machine learning algorithms based on common classes of diseases.

  2. Ensemble Machine Learning Methods and Applications

    CERN Document Server

    Ma, Yunqian

    2012-01-01

    It is common wisdom that gathering a variety of views and inputs improves the process of decision making, and, indeed, underpins a democratic society. Dubbed “ensemble learning” by researchers in computational intelligence and machine learning, it is known to improve a decision system’s robustness and accuracy. Now, fresh developments are allowing researchers to unleash the power of ensemble learning in an increasing range of real-world applications. Ensemble learning algorithms such as “boosting” and “random forest” facilitate solutions to key computational issues such as face detection and are now being applied in areas as diverse as object trackingand bioinformatics.   Responding to a shortage of literature dedicated to the topic, this volume offers comprehensive coverage of state-of-the-art ensemble learning techniques, including various contributions from researchers in leading industrial research labs. At once a solid theoretical study and a practical guide, the volume is a windfall for r...

  3. MSD Recombination Method in Statistical Machine Translation

    Science.gov (United States)

    Gros, Jerneja Žganec

    2008-11-01

    Freely available tools and language resources were used to build the VoiceTRAN statistical machine translation (SMT) system. Various configuration variations of the system are presented and evaluated. The VoiceTRAN SMT system outperformed the baseline conventional rule-based MT system in all English-Slovenian in-domain test setups. To further increase the generalization capability of the translation model for lower-coverage out-of-domain test sentences, an "MSD-recombination" approach was proposed. This approach not only allows a better exploitation of conventional translation models, but also performs well in the more demanding translation direction; that is, into a highly inflectional language. Using this approach in the out-of-domain setup of the English-Slovenian JRC-ACQUIS task, we have achieved significant improvements in translation quality.

  4. DL-ReSuMe: A Delay Learning-Based Remote Supervised Method for Spiking Neurons.

    Science.gov (United States)

    Taherkhani, Aboozar; Belatreche, Ammar; Li, Yuhua; Maguire, Liam P

    2015-12-01

    Recent research has shown the potential capability of spiking neural networks (SNNs) to model complex information processing in the brain. There is biological evidence to prove the use of the precise timing of spikes for information coding. However, the exact learning mechanism in which the neuron is trained to fire at precise times remains an open problem. The majority of the existing learning methods for SNNs are based on weight adjustment. However, there is also biological evidence that the synaptic delay is not constant. In this paper, a learning method for spiking neurons, called delay learning remote supervised method (DL-ReSuMe), is proposed to merge the delay shift approach and ReSuMe-based weight adjustment to enhance the learning performance. DL-ReSuMe uses more biologically plausible properties, such as delay learning, and needs less weight adjustment than ReSuMe. Simulation results have shown that the proposed DL-ReSuMe approach achieves learning accuracy and learning speed improvements compared with ReSuMe.

  5. A Review of Design Optimization Methods for Electrical Machines

    Directory of Open Access Journals (Sweden)

    Gang Lei

    2017-11-01

    Full Text Available Electrical machines are the hearts of many appliances, industrial equipment and systems. In the context of global sustainability, they must fulfill various requirements, not only physically and technologically but also environmentally. Therefore, their design optimization process becomes more and more complex as more engineering disciplines/domains and constraints are involved, such as electromagnetics, structural mechanics and heat transfer. This paper aims to present a review of the design optimization methods for electrical machines, including design analysis methods and models, optimization models, algorithms and methods/strategies. Several efficient optimization methods/strategies are highlighted with comments, including surrogate-model based and multi-level optimization methods. In addition, two promising and challenging topics in both academic and industrial communities are discussed, and two novel optimization methods are introduced for advanced design optimization of electrical machines. First, a system-level design optimization method is introduced for the development of advanced electric drive systems. Second, a robust design optimization method based on the design for six-sigma technique is introduced for high-quality manufacturing of electrical machines in production. Meanwhile, a proposal is presented for the development of a robust design optimization service based on industrial big data and cloud computing services. Finally, five future directions are proposed, including smart design optimization method for future intelligent design and production of electrical machines.

  6. Efficient forced vibration reanalysis method for rotating electric machines

    Science.gov (United States)

    Saito, Akira; Suzuki, Hiromitsu; Kuroishi, Masakatsu; Nakai, Hideo

    2015-01-01

    Rotating electric machines are subject to forced vibration by magnetic force excitation with wide-band frequency spectrum that are dependent on the operating conditions. Therefore, when designing the electric machines, it is inevitable to compute the vibration response of the machines at various operating conditions efficiently and accurately. This paper presents an efficient frequency-domain vibration analysis method for the electric machines. The method enables the efficient re-analysis of the vibration response of electric machines at various operating conditions without the necessity to re-compute the harmonic response by finite element analyses. Theoretical background of the proposed method is provided, which is based on the modal reduction of the magnetic force excitation by a set of amplitude-modulated standing-waves. The method is applied to the forced response vibration of the interior permanent magnet motor at a fixed operating condition. The results computed by the proposed method agree very well with those computed by the conventional harmonic response analysis by the FEA. The proposed method is then applied to the spin-up test condition to demonstrate its applicability to various operating conditions. It is observed that the proposed method can successfully be applied to the spin-up test conditions, and the measured dominant frequency peaks in the frequency response can be well captured by the proposed approach.

  7. Shaft Boring Machine: A method of mechanized vertical shaft excavation

    International Nuclear Information System (INIS)

    Goodell, T.M.

    1991-01-01

    The Shaft Boring Machine (SBM) is a vertical application of proven rock boring technology. The machine applies a rotating cutter wheel with disk cutters for shaft excavation. The wheel is thrust against the rock by hydraulic cylinders and slews about the shaft bottom as it rotates. Cuttings are removed by a clam shell device similar to conventional shaft mucking and the muck is hoisted by buckets. The entire machine moves down (and up) the shaft through the use of a system of grippers thrust against the shaft wall. These grippers and their associated cylinders also provide the means to maintain verticality and stability of the machine. The machine applies the same principles as tunnel boring machines but in a vertical mode. Other shaft construction activities such as rock bolting, utility installation and shaft concrete lining can be accomplished concurrent with shaft boring. The method is comparable in cost to conventional sinking to a depth of about 460 meters (1500 feet) beyond which the SBM has a clear host advantage. The SBM has a greater advantage in productivity in that it can excavate significantly faster than drill and blast methods

  8. Manufacturing Methods for Cutting, Machining and Drilling Composites. Volume 1. Composites Machining Handbook

    Science.gov (United States)

    1978-08-01

    12°±30’ 1180±2° OPTIONAL .0005 IN./IN. BACK TAPER 015 RAD LIPS TO BE WITHIN .002 OF TRUE ANGULAR POSITION NOTES: 1. LAND WIDTH: 28% ± .005... horoscope and dye-penetrant requirements. 79 PHASE 1 PHASE II PHASE III PHASE IV CUTTING DRILLING MACHINING NONDESTRUCTIVE EVALUATION METHOD MATERIAL

  9. Machine cost analysis using the traditional machine-rate method and ChargeOut!

    Science.gov (United States)

    E. M. (Ted) Bilek

    2009-01-01

    Forestry operations require ever more use of expensive capital equipment. Mechanization is frequently necessary to perform cost-effective and safe operations. Increased capital should mean more sophisticated capital costing methodologies. However the machine rate method, which is the costing methodology most frequently used, dates back to 1942. CHARGEOUT!, a recently...

  10. Comparative analysis of various methods for modelling permanent magnet machines

    NARCIS (Netherlands)

    Ramakrishnan, K.; Curti, M.; Zarko, D.; Mastinu, G.; Paulides, J.J.H.; Lomonova, E.A.

    2017-01-01

    In this paper, six different modelling methods for permanent magnet (PM) electric machines are compared in terms of their computational complexity and accuracy. The methods are based primarily on conformal mapping, mode matching, and harmonic modelling. In the case of conformal mapping, slotted air

  11. A defect-driven diagnostic method for machine tool spindles.

    Science.gov (United States)

    Vogl, Gregory W; Donmez, M Alkan

    2015-01-01

    Simple vibration-based metrics are, in many cases, insufficient to diagnose machine tool spindle condition. These metrics couple defect-based motion with spindle dynamics; diagnostics should be defect-driven. A new method and spindle condition estimation device (SCED) were developed to acquire data and to separate system dynamics from defect geometry. Based on this method, a spindle condition metric relying only on defect geometry is proposed. Application of the SCED on various milling and turning spindles shows that the new approach is robust for diagnosing the machine tool spindle condition.

  12. Radioisotope method potentialities in machine reliability and durability enhancement

    International Nuclear Information System (INIS)

    Postnikov, V.I.

    1975-01-01

    The development of a surface activation method is reviewed with regard to wear of machine parts. Examples demonstrating the highly promising aspects and practical application of the method are cited. The use of high-sensitivity instruments and variation of activation depth from 10 um to 0.5 mm allows to perform the investigations at a sensitivity of 0.05 um and to estimate the linear values of machine wear. Standard diagrams are presented for measuring the wear of different machine parts by means of surface activation. Investigations performed at several Soviet technological institutes afford a set of dependences, which characterize the distribution of radioactive isotopes in depth under different conditions of activation of diverse metals and alloys and permit to study the wear of any metal

  13. An Expectation-Maximization Method for Calibrating Synchronous Machine Models

    Energy Technology Data Exchange (ETDEWEB)

    Meng, Da; Zhou, Ning; Lu, Shuai; Lin, Guang

    2013-07-21

    The accuracy of a power system dynamic model is essential to its secure and efficient operation. Lower confidence in model accuracy usually leads to conservative operation and lowers asset usage. To improve model accuracy, this paper proposes an expectation-maximization (EM) method to calibrate the synchronous machine model using phasor measurement unit (PMU) data. First, an extended Kalman filter (EKF) is applied to estimate the dynamic states using measurement data. Then, the parameters are calculated based on the estimated states using maximum likelihood estimation (MLE) method. The EM method iterates over the preceding two steps to improve estimation accuracy. The proposed EM method’s performance is evaluated using a single-machine infinite bus system and compared with a method where both state and parameters are estimated using an EKF method. Sensitivity studies of the parameter calibration using EM method are also presented to show the robustness of the proposed method for different levels of measurement noise and initial parameter uncertainty.

  14. Microscale soil structure development after glacial retreat - using machine-learning based segmentation of elemental distributions obtained by NanoSIMS

    Science.gov (United States)

    Schweizer, Steffen; Schlueter, Steffen; Hoeschen, Carmen; Koegel-Knabner, Ingrid; Mueller, Carsten W.

    2017-04-01

    Soil organic matter (SOM) is distributed on mineral surfaces depending on physicochemical soil properties that vary at the submicron scale. Nanoscale secondary ion mass spectrometry (NanoSIMS) can be used to visualize the spatial distribution of up to seven elements simultaneously at a lateral resolution of approximately 100 nm from which patterns of SOM coatings can be derived. Existing computational methods are mostly confined to visualization and lack spatial quantification measures of coverage and connectivity of organic matter coatings. This study proposes a methodology for the spatial analysis of SOM coatings based on supervised pixel classification and automatic image analysis of the 12C, 12C14N (indicative for SOM) and 16O (indicative for mineral surfaces) secondary ion distributions. The image segmentation of the secondary ion distributions into mineral particle surface and organic coating was done with a machine learning algorithm, which accounts for multiple features like size, color, intensity, edge and texture in all three ion distributions simultaneously. Our workflow allowed the spatial analysis of differences in the SOM coverage during soil development in the Damma glacier forefield (Switzerland) based on NanoSIMS measurements (n=121; containing ca. 4000 particles). The Damma chronosequence comprises several stages of soil development with increasing ice-free period (from ca. 15 to >700 years). To investigate mineral-associated SOM in the developing soil we obtained clay fractions (2.2 g cm3). We found increased coverage and a simultaneous development from patchy-distributed organic coatings to more connected coatings with increasing time after glacial retreat. The normalized N:C ratio (12C14N: (12C14N + 12C)) on the organic matter coatings was higher in the medium-aged soils than in the young and mature ones in both heavy and light mineral fraction. This reflects the sequential accumulation of proteinaceous SOM in the medium-aged soils and C

  15. Kernel Methods for Machine Learning with Life Science Applications

    DEFF Research Database (Denmark)

    Abrahamsen, Trine Julie

    Kernel methods refer to a family of widely used nonlinear algorithms for machine learning tasks like classification, regression, and feature extraction. By exploiting the so-called kernel trick straightforward extensions of classical linear algorithms are enabled as long as the data only appear a...

  16. Evaluation of man-machine systems - methods and problems

    International Nuclear Information System (INIS)

    1985-01-01

    The symposium gives a survey of the methods of evaluation which permit as quantitive an assessment as possible of the collaboration between men and machines. This complex of problems is of great current significance in many areas of application. The systems to be evaluated are aircraft, land vehicles and watercraft as well as process control systems. (orig./GL) [de

  17. Machine learning methods without tears: a primer for ecologists.

    Science.gov (United States)

    Olden, Julian D; Lawler, Joshua J; Poff, N LeRoy

    2008-06-01

    Machine learning methods, a family of statistical techniques with origins in the field of artificial intelligence, are recognized as holding great promise for the advancement of understanding and prediction about ecological phenomena. These modeling techniques are flexible enough to handle complex problems with multiple interacting elements and typically outcompete traditional approaches (e.g., generalized linear models), making them ideal for modeling ecological systems. Despite their inherent advantages, a review of the literature reveals only a modest use of these approaches in ecology as compared to other disciplines. One potential explanation for this lack of interest is that machine learning techniques do not fall neatly into the class of statistical modeling approaches with which most ecologists are familiar. In this paper, we provide an introduction to three machine learning approaches that can be broadly used by ecologists: classification and regression trees, artificial neural networks, and evolutionary computation. For each approach, we provide a brief background to the methodology, give examples of its application in ecology, describe model development and implementation, discuss strengths and weaknesses, explore the availability of statistical software, and provide an illustrative example. Although the ecological application of machine learning approaches has increased, there remains considerable skepticism with respect to the role of these techniques in ecology. Our review encourages a greater understanding of machin learning approaches and promotes their future application and utilization, while also providing a basis from which ecologists can make informed decisions about whether to select or avoid these approaches in their future modeling endeavors.

  18. Comparison of Machine Learning Methods for the Arterial Hypertension Diagnostics

    Directory of Open Access Journals (Sweden)

    Vladimir S. Kublanov

    2017-01-01

    Full Text Available The paper presents results of machine learning approach accuracy applied analysis of cardiac activity. The study evaluates the diagnostics possibilities of the arterial hypertension by means of the short-term heart rate variability signals. Two groups were studied: 30 relatively healthy volunteers and 40 patients suffering from the arterial hypertension of II-III degree. The following machine learning approaches were studied: linear and quadratic discriminant analysis, k-nearest neighbors, support vector machine with radial basis, decision trees, and naive Bayes classifier. Moreover, in the study, different methods of feature extraction are analyzed: statistical, spectral, wavelet, and multifractal. All in all, 53 features were investigated. Investigation results show that discriminant analysis achieves the highest classification accuracy. The suggested approach of noncorrelated feature set search achieved higher results than data set based on the principal components.

  19. New Cogging Torque Reduction Methods for Permanent Magnet Machine

    Science.gov (United States)

    Bahrim, F. S.; Sulaiman, E.; Kumar, R.; Jusoh, L. I.

    2017-08-01

    Permanent magnet type motors (PMs) especially permanent magnet synchronous motor (PMSM) are expanding its limbs in industrial application system and widely used in various applications. The key features of this machine include high power and torque density, extending speed range, high efficiency, better dynamic performance and good flux-weakening capability. Nevertheless, high in cogging torque, which may cause noise and vibration, is one of the threat of the machine performance. Therefore, with the aid of 3-D finite element analysis (FEA) and simulation using JMAG Designer, this paper proposed new method for cogging torque reduction. Based on the simulation, methods of combining the skewing with radial pole pairing method and skewing with axial pole pairing method reduces the cogging torque effect up to 71.86% and 65.69% simultaneously.

  20. Studying depression using imaging and machine learning methods

    OpenAIRE

    Patel, Meenal J.; Khalaf, Alexander; Aizenstein, Howard J.

    2015-01-01

    Depression is a complex clinical entity that can pose challenges for clinicians regarding both accurate diagnosis and effective timely treatment. These challenges have prompted the development of multiple machine learning methods to help improve the management of this disease. These methods utilize anatomical and physiological data acquired from neuroimaging to create models that can identify depressed patients vs. non-depressed patients and predict treatment outcomes. This article (1) presen...

  1. Unsupervised process monitoring and fault diagnosis with machine learning methods

    CERN Document Server

    Aldrich, Chris

    2013-01-01

    This unique text/reference describes in detail the latest advances in unsupervised process monitoring and fault diagnosis with machine learning methods. Abundant case studies throughout the text demonstrate the efficacy of each method in real-world settings. The broad coverage examines such cutting-edge topics as the use of information theory to enhance unsupervised learning in tree-based methods, the extension of kernel methods to multiple kernel learning for feature extraction from data, and the incremental training of multilayer perceptrons to construct deep architectures for enhanced data

  2. Machine Learning and Data Mining Methods in Diabetes Research.

    Science.gov (United States)

    Kavakiotis, Ioannis; Tsave, Olga; Salifoglou, Athanasios; Maglaveras, Nicos; Vlahavas, Ioannis; Chouvarda, Ioanna

    2017-01-01

    The remarkable advances in biotechnology and health sciences have led to a significant production of data, such as high throughput genetic data and clinical information, generated from large Electronic Health Records (EHRs). To this end, application of machine learning and data mining methods in biosciences is presently, more than ever before, vital and indispensable in efforts to transform intelligently all available information into valuable knowledge. Diabetes mellitus (DM) is defined as a group of metabolic disorders exerting significant pressure on human health worldwide. Extensive research in all aspects of diabetes (diagnosis, etiopathophysiology, therapy, etc.) has led to the generation of huge amounts of data. The aim of the present study is to conduct a systematic review of the applications of machine learning, data mining techniques and tools in the field of diabetes research with respect to a) Prediction and Diagnosis, b) Diabetic Complications, c) Genetic Background and Environment, and e) Health Care and Management with the first category appearing to be the most popular. A wide range of machine learning algorithms were employed. In general, 85% of those used were characterized by supervised learning approaches and 15% by unsupervised ones, and more specifically, association rules. Support vector machines (SVM) arise as the most successful and widely used algorithm. Concerning the type of data, clinical datasets were mainly used. The title applications in the selected articles project the usefulness of extracting valuable knowledge leading to new hypotheses targeting deeper understanding and further investigation in DM.

  3. A Machine Learning Method for the Prediction of Receptor Activation in the Simulation of Synapses

    Science.gov (United States)

    Montes, Jesus; Gomez, Elena; Merchán-Pérez, Angel; DeFelipe, Javier; Peña, Jose-Maria

    2013-01-01

    Chemical synaptic transmission involves the release of a neurotransmitter that diffuses in the extracellular space and interacts with specific receptors located on the postsynaptic membrane. Computer simulation approaches provide fundamental tools for exploring various aspects of the synaptic transmission under different conditions. In particular, Monte Carlo methods can track the stochastic movements of neurotransmitter molecules and their interactions with other discrete molecules, the receptors. However, these methods are computationally expensive, even when used with simplified models, preventing their use in large-scale and multi-scale simulations of complex neuronal systems that may involve large numbers of synaptic connections. We have developed a machine-learning based method that can accurately predict relevant aspects of the behavior of synapses, such as the percentage of open synaptic receptors as a function of time since the release of the neurotransmitter, with considerably lower computational cost compared with the conventional Monte Carlo alternative. The method is designed to learn patterns and general principles from a corpus of previously generated Monte Carlo simulations of synapses covering a wide range of structural and functional characteristics. These patterns are later used as a predictive model of the behavior of synapses under different conditions without the need for additional computationally expensive Monte Carlo simulations. This is performed in five stages: data sampling, fold creation, machine learning, validation and curve fitting. The resulting procedure is accurate, automatic, and it is general enough to predict synapse behavior under experimental conditions that are different to the ones it has been trained on. Since our method efficiently reproduces the results that can be obtained with Monte Carlo simulations at a considerably lower computational cost, it is suitable for the simulation of high numbers of synapses and it is

  4. A machine learning method for the prediction of receptor activation in the simulation of synapses.

    Directory of Open Access Journals (Sweden)

    Jesus Montes

    Full Text Available Chemical synaptic transmission involves the release of a neurotransmitter that diffuses in the extracellular space and interacts with specific receptors located on the postsynaptic membrane. Computer simulation approaches provide fundamental tools for exploring various aspects of the synaptic transmission under different conditions. In particular, Monte Carlo methods can track the stochastic movements of neurotransmitter molecules and their interactions with other discrete molecules, the receptors. However, these methods are computationally expensive, even when used with simplified models, preventing their use in large-scale and multi-scale simulations of complex neuronal systems that may involve large numbers of synaptic connections. We have developed a machine-learning based method that can accurately predict relevant aspects of the behavior of synapses, such as the percentage of open synaptic receptors as a function of time since the release of the neurotransmitter, with considerably lower computational cost compared with the conventional Monte Carlo alternative. The method is designed to learn patterns and general principles from a corpus of previously generated Monte Carlo simulations of synapses covering a wide range of structural and functional characteristics. These patterns are later used as a predictive model of the behavior of synapses under different conditions without the need for additional computationally expensive Monte Carlo simulations. This is performed in five stages: data sampling, fold creation, machine learning, validation and curve fitting. The resulting procedure is accurate, automatic, and it is general enough to predict synapse behavior under experimental conditions that are different to the ones it has been trained on. Since our method efficiently reproduces the results that can be obtained with Monte Carlo simulations at a considerably lower computational cost, it is suitable for the simulation of high numbers of

  5. Machine learning methods for clinical forms analysis in mental health.

    Science.gov (United States)

    Strauss, John; Peguero, Arturo Martinez; Hirst, Graeme

    2013-01-01

    In preparation for a clinical information system implementation, the Centre for Addiction and Mental Health (CAMH) Clinical Information Transformation project completed multiple preparation steps. An automated process was desired to supplement the onerous task of manual analysis of clinical forms. We used natural language processing (NLP) and machine learning (ML) methods for a series of 266 separate clinical forms. For the investigation, documents were represented by feature vectors. We used four ML algorithms for our examination of the forms: cluster analysis, k-nearest neigh-bours (kNN), decision trees and support vector machines (SVM). Parameters for each algorithm were optimized. SVM had the best performance with a precision of 64.6%. Though we did not find any method sufficiently accurate for practical use, to our knowledge this approach to forms has not been used previously in mental health.

  6. A Photometric Machine-Learning Method to Infer Stellar Metallicity

    Science.gov (United States)

    Miller, Adam A.

    2015-01-01

    Following its formation, a star's metal content is one of the few factors that can significantly alter its evolution. Measurements of stellar metallicity ([Fe/H]) typically require a spectrum, but spectroscopic surveys are limited to a few x 10(exp 6) targets; photometric surveys, on the other hand, have detected > 10(exp 9) stars. I present a new machine-learning method to predict [Fe/H] from photometric colors measured by the Sloan Digital Sky Survey (SDSS). The training set consists of approx. 120,000 stars with SDSS photometry and reliable [Fe/H] measurements from the SEGUE Stellar Parameters Pipeline (SSPP). For bright stars (g' machine-learning method is similar to the scatter in [Fe/H] measurements from low-resolution spectra..

  7. Housing Value Forecasting Based on Machine Learning Methods

    OpenAIRE

    Mu, Jingyi; Wu, Fang; Zhang, Aihua

    2014-01-01

    In the era of big data, many urgent issues to tackle in all walks of life all can be solved via big data technique. Compared with the Internet, economy, industry, and aerospace fields, the application of big data in the area of architecture is relatively few. In this paper, on the basis of the actual data, the values of Boston suburb houses are forecast by several machine learning methods. According to the predictions, the government and developers can make decisions about whether developing...

  8. Extremely Randomized Machine Learning Methods for Compound Activity Prediction

    Directory of Open Access Journals (Sweden)

    Wojciech M. Czarnecki

    2015-11-01

    Full Text Available Speed, a relatively low requirement for computational resources and high effectiveness of the evaluation of the bioactivity of compounds have caused a rapid growth of interest in the application of machine learning methods to virtual screening tasks. However, due to the growth of the amount of data also in cheminformatics and related fields, the aim of research has shifted not only towards the development of algorithms of high predictive power but also towards the simplification of previously existing methods to obtain results more quickly. In the study, we tested two approaches belonging to the group of so-called ‘extremely randomized methods’—Extreme Entropy Machine and Extremely Randomized Trees—for their ability to properly identify compounds that have activity towards particular protein targets. These methods were compared with their ‘non-extreme’ competitors, i.e., Support Vector Machine and Random Forest. The extreme approaches were not only found out to improve the efficiency of the classification of bioactive compounds, but they were also proved to be less computationally complex, requiring fewer steps to perform an optimization procedure.

  9. Housing Value Forecasting Based on Machine Learning Methods

    Directory of Open Access Journals (Sweden)

    Jingyi Mu

    2014-01-01

    Full Text Available In the era of big data, many urgent issues to tackle in all walks of life all can be solved via big data technique. Compared with the Internet, economy, industry, and aerospace fields, the application of big data in the area of architecture is relatively few. In this paper, on the basis of the actual data, the values of Boston suburb houses are forecast by several machine learning methods. According to the predictions, the government and developers can make decisions about whether developing the real estate on corresponding regions or not. In this paper, support vector machine (SVM, least squares support vector machine (LSSVM, and partial least squares (PLS methods are used to forecast the home values. And these algorithms are compared according to the predicted results. Experiment shows that although the data set exists serious nonlinearity, the experiment result also show SVM and LSSVM methods are superior to PLS on dealing with the problem of nonlinearity. The global optimal solution can be found and best forecasting effect can be achieved by SVM because of solving a quadratic programming problem. In this paper, the different computation efficiencies of the algorithms are compared according to the computing times of relevant algorithms.

  10. Data Mining and Machine Learning Methods for Dementia Research.

    Science.gov (United States)

    Li, Rui

    2018-01-01

    Patient data in clinical research often includes large amounts of structured information, such as neuroimaging data, neuropsychological test results, and demographic variables. Given the various sources of information, we can develop computerized methods that can be a great help to clinicians to discover hidden patterns in the data. The computerized methods often employ data mining and machine learning algorithms, lending themselves as the computer-aided diagnosis (CAD) tool that assists clinicians in making diagnostic decisions. In this chapter, we review state-of-the-art methods used in dementia research, and briefly introduce some recently proposed algorithms subsequently.

  11. Simplified Hybrid-Secondary Uncluttered Machine And Method

    Science.gov (United States)

    Hsu, John S [Oak Ridge, TN

    2005-05-10

    An electric machine (40, 40') has a stator (43) and a rotor (46) and a primary air gap (48) has secondary coils (47c, 47d) separated from the rotor (46) by a secondary air gap (49) so as to induce a slip current in the secondary coils (47c, 47d). The rotor (46, 76) has magnetic brushes (A, B, C, D) or wires (80) which couple flux in through the rotor (46) to the secondary coils (47c, 47d) without inducing a current in the rotor (46) and without coupling a stator rotational energy component to the secondary coils (47c, 47d). The machine can be operated as a motor or a generator in multi-phase or single-phase embodiments. A method of providing a slip energy controller is also disclosed.

  12. Hybrid-secondary uncluttered permanent magnet machine and method

    Science.gov (United States)

    Hsu, John S.

    2005-12-20

    An electric machine (40) has a stator (43), a permanent magnet rotor (38) with permanent magnets (39) and a magnetic coupling uncluttered rotor (46) for inducing a slip energy current in secondary coils (47). A dc flux can be produced in the uncluttered rotor when the secondary coils are fed with dc currents. The magnetic coupling uncluttered rotor (46) has magnetic brushes (A, B, C, D) which couple flux in through the rotor (46) to the secondary coils (47c, 47d) without inducing a current in the rotor (46) and without coupling a stator rotational energy component to the secondary coils (47c, 47d). The machine can be operated as a motor or a generator in multi-phase or single-phase embodiments and is applicable to the hybrid electric vehicle. A method of providing a slip energy controller is also disclosed.

  13. In Silico Prediction of Gamma-Aminobutyric Acid Type-A Receptors Using Novel Machine-Learning-Based SVM and GBDT Approaches

    Directory of Open Access Journals (Sweden)

    Zhijun Liao

    2016-01-01

    Full Text Available Gamma-aminobutyric acid type-A receptors (GABAARs belong to multisubunit membrane spanning ligand-gated ion channels (LGICs which act as the principal mediators of rapid inhibitory synaptic transmission in the human brain. Therefore, the category prediction of GABAARs just from the protein amino acid sequence would be very helpful for the recognition and research of novel receptors. Based on the proteins’ physicochemical properties, amino acids composition and position, a GABAAR classifier was first constructed using a 188-dimensional (188D algorithm at 90% cd-hit identity and compared with pseudo-amino acid composition (PseAAC and ProtrWeb web-based algorithms for human GABAAR proteins. Then, four classifiers including gradient boosting decision tree (GBDT, random forest (RF, a library for support vector machine (libSVM, and k-nearest neighbor (k-NN were compared on the dataset at cd-hit 40% low identity. This work obtained the highest correctly classified rate at 96.8% and the highest specificity at 99.29%. But the values of sensitivity, accuracy, and Matthew’s correlation coefficient were a little lower than those of PseAAC and ProtrWeb; GBDT and libSVM can make a little better performance than RF and k-NN at the second dataset. In conclusion, a GABAAR classifier was successfully constructed using only the protein sequence information.

  14. Low-Resolution Tactile Image Recognition for Automated Robotic Assembly Using Kernel PCA-Based Feature Fusion and Multiple Kernel Learning-Based Support Vector Machine

    Directory of Open Access Journals (Sweden)

    Yi-Hung Liu

    2014-01-01

    Full Text Available In this paper, we propose a robust tactile sensing image recognition scheme for automatic robotic assembly. First, an image reprocessing procedure is designed to enhance the contrast of the tactile image. In the second layer, geometric features and Fourier descriptors are extracted from the image. Then, kernel principal component analysis (kernel PCA is applied to transform the features into ones with better discriminating ability, which is the kernel PCA-based feature fusion. The transformed features are fed into the third layer for classification. In this paper, we design a classifier by combining the multiple kernel learning (MKL algorithm and support vector machine (SVM. We also design and implement a tactile sensing array consisting of 10-by-10 sensing elements. Experimental results, carried out on real tactile images acquired by the designed tactile sensing array, show that the kernel PCA-based feature fusion can significantly improve the discriminating performance of the geometric features and Fourier descriptors. Also, the designed MKL-SVM outperforms the regular SVM in terms of recognition accuracy. The proposed recognition scheme is able to achieve a high recognition rate of over 85% for the classification of 12 commonly used metal parts in industrial applications.

  15. Machine-Learning-Based Electronic Triage More Accurately Differentiates Patients With Respect to Clinical Outcomes Compared With the Emergency Severity Index.

    Science.gov (United States)

    Levin, Scott; Toerper, Matthew; Hamrock, Eric; Hinson, Jeremiah S; Barnes, Sean; Gardner, Heather; Dugas, Andrea; Linton, Bob; Kirsch, Tom; Kelen, Gabor

    2018-05-01

    Standards for emergency department (ED) triage in the United States rely heavily on subjective assessment and are limited in their ability to risk-stratify patients. This study seeks to evaluate an electronic triage system (e-triage) based on machine learning that predicts likelihood of acute outcomes enabling improved patient differentiation. A multisite, retrospective, cross-sectional study of 172,726 ED visits from urban and community EDs was conducted. E-triage is composed of a random forest model applied to triage data (vital signs, chief complaint, and active medical history) that predicts the need for critical care, an emergency procedure, and inpatient hospitalization in parallel and translates risk to triage level designations. Predicted outcomes and secondary outcomes of elevated troponin and lactate levels were evaluated and compared with the Emergency Severity Index (ESI). E-triage predictions had an area under the curve ranging from 0.73 to 0.92 and demonstrated equivalent or improved identification of clinical patient outcomes compared with ESI at both EDs. E-triage provided rationale for risk-based differentiation of the more than 65% of ED visits triaged to ESI level 3. Matching the ESI patient distribution for comparisons, e-triage identified more than 10% (14,326 patients) of ESI level 3 patients requiring up triage who had substantially increased risk of critical care or emergency procedure (1.7% ESI level 3 versus 6.2% up triaged) and hospitalization (18.9% versus 45.4%) across EDs. E-triage more accurately classifies ESI level 3 patients and highlights opportunities to use predictive analytics to support triage decisionmaking. Further prospective validation is needed. Copyright © 2017 American College of Emergency Physicians. Published by Elsevier Inc. All rights reserved.

  16. MACHINE LEARNING METHODS IN DIGITAL AGRICULTURE: ALGORITHMS AND CASES

    Directory of Open Access Journals (Sweden)

    Aleksandr Vasilyevich Koshkarov

    2018-05-01

    Full Text Available Ensuring food security is a major challenge in many countries. With a growing global population, the issues of improving the efficiency of agriculture have become most relevant. Farmers are looking for new ways to increase yields, and governments of different countries are developing new programs to support agriculture. This contributes to a more active implementation of digital technologies in agriculture, helping farmers to make better decisions, increase yields and take care of the environment. The central point is the collection and analysis of data. In the industry of agriculture, data can be collected from different sources and may contain useful patterns that identify potential problems or opportunities. Data should be analyzed using machine learning algorithms to extract useful insights. Such methods of precision farming allow the farmer to monitor individual parts of the field, optimize the consumption of water and chemicals, and identify problems quickly. Purpose: to make an overview of the machine learning algorithms used for data analysis in agriculture. Methodology: an overview of the relevant literature; a survey of farmers. Results: relevant algorithms of machine learning for the analysis of data in agriculture at various levels were identified: soil analysis (soil assessment, soil classification, soil fertility predictions, weather forecast (simulation of climate change, temperature and precipitation prediction, and analysis of vegetation (weed identification, vegetation classification, plant disease identification, crop forecasting. Practical implications: agriculture, crop production.

  17. Machine Learning-Empowered Biometric Methods for Biomedicine Applications

    Directory of Open Access Journals (Sweden)

    Qingxue Zhang

    2017-07-01

    Full Text Available Nowadays, pervasive computing technologies are paving a promising way for advanced smart health applications. However, a key impediment faced by wide deployment of these assistive smart devices, is the increasing privacy and security issue, such as how to protect access to sensitive patient data in the health record. Focusing on this challenge, biometrics are attracting intense attention in terms of effective user identification to enable confidential health applications. In this paper, we take special interest in two bio-potential-based biometric modalities, electrocardiogram (ECG and electroencephalogram (EEG, considering that they are both unique to individuals, and more reliable than token (identity card and knowledge-based (username/password methods. After extracting effective features in multiple domains from ECG/EEG signals, several advanced machine learning algorithms are introduced to perform the user identification task, including Neural Network, K-nearest Neighbor, Bagging, Random Forest and AdaBoost. Experimental results on two public ECG and EEG datasets show that ECG is a more robust biometric modality compared to EEG, leveraging a higher signal to noise ratio and also more distinguishable morphological patterns. Among different machine learning classifiers, the random forest greatly outperforms the others and owns an identification rate as high as 98%. This study is expected to demonstrate that properly selected biometric empowered by an effective machine learner owns a great potential, to enable confidential biomedicine applications in the era of smart digital health.

  18. Man-machine communication in reactor control using AI methods

    International Nuclear Information System (INIS)

    Klebau, J.; Lindner, A.; Fiedler, U.

    1987-01-01

    In the last years the interest in process control has expecially focused on problems of man-machine communication. It depends on its great importance to process performance and user acceptance. Advanced computerized operator aids, e.g. in nuclear power plants, are as well as their man-machine interface. In the Central Institute for Nuclear Research in Rossendorf a computerized operator support system for nuclear power plants is designed, which is involved in a decentralized process automation system. A similar but simpler system, the Hierarchical Informational System (HIS) at the Rossendorf Research Reactor, works with a computer controlled man-machine interface, based on menu. In the special case of the disturbance analysis program SAAP-2, which is included in the HIS, the limits of menu techniques are obviously. Therefore it seems to be necessary and with extended hard- and software possible to realize an user controlled natural language interface using Artificial Intelligence (AI) methods. The draft of such a system is described. It should be able to learn during a teaching phase all phrases and their meanings. The system will work on the basis of a self-organizing, associative data structure. It is used to recognize a great amount of words which are used in language analysis. Error recognition and, if possible, correction is done by means of a distance function in the word set. Language analysis should be carried out with a simplified word class controlled functional analysis. With this interface it is supposed to get experience in intelligent man-machine communication to enhance operational safety in future. (author)

  19. Machine learning based methods for the study of metabolism and its effect on the behavior of biological systems

    OpenAIRE

    Higuera Cabañes, Clara

    2015-01-01

    Las disciplinas de bioinformática y biología computacional, que se sirven de técnicas informáticas para dar solución a problemas en biología, se han posicionado como piezas clave en la investigación en biología molecular. Tanto por la gran cantidad de información compleja generada en los laboratorios como por la necesidad de simular in silico determinados procesos biológicos para su estudio, actualmente es esencial el desarrollo de nuevos métodos computacionales que asistan en la investigació...

  20. Estimating building energy consumption using extreme learning machine method

    International Nuclear Information System (INIS)

    Naji, Sareh; Keivani, Afram; Shamshirband, Shahaboddin; Alengaram, U. Johnson; Jumaat, Mohd Zamin; Mansor, Zulkefli; Lee, Malrey

    2016-01-01

    The current energy requirements of buildings comprise a large percentage of the total energy consumed around the world. The demand of energy, as well as the construction materials used in buildings, are becoming increasingly problematic for the earth's sustainable future, and thus have led to alarming concern. The energy efficiency of buildings can be improved, and in order to do so, their operational energy usage should be estimated early in the design phase, so that buildings are as sustainable as possible. An early energy estimate can greatly help architects and engineers create sustainable structures. This study proposes a novel method to estimate building energy consumption based on the ELM (Extreme Learning Machine) method. This method is applied to building material thicknesses and their thermal insulation capability (K-value). For this purpose up to 180 simulations are carried out for different material thicknesses and insulation properties, using the EnergyPlus software application. The estimation and prediction obtained by the ELM model are compared with GP (genetic programming) and ANNs (artificial neural network) models for accuracy. The simulation results indicate that an improvement in predictive accuracy is achievable with the ELM approach in comparison with GP and ANN. - Highlights: • Buildings consume huge amounts of energy for operation. • Envelope materials and insulation influence building energy consumption. • Extreme learning machine is used to estimate energy usage of a sample building. • The key effective factors in this study are insulation thickness and K-value.

  1. DNS Tunneling Detection Method Based on Multilabel Support Vector Machine

    Directory of Open Access Journals (Sweden)

    Ahmed Almusawi

    2018-01-01

    Full Text Available DNS tunneling is a method used by malicious users who intend to bypass the firewall to send or receive commands and data. This has a significant impact on revealing or releasing classified information. Several researchers have examined the use of machine learning in terms of detecting DNS tunneling. However, these studies have treated the problem of DNS tunneling as a binary classification where the class label is either legitimate or tunnel. In fact, there are different types of DNS tunneling such as FTP-DNS tunneling, HTTP-DNS tunneling, HTTPS-DNS tunneling, and POP3-DNS tunneling. Therefore, there is a vital demand to not only detect the DNS tunneling but rather classify such tunnel. This study aims to propose a multilabel support vector machine in order to detect and classify the DNS tunneling. The proposed method has been evaluated using a benchmark dataset that contains numerous DNS queries and is compared with a multilabel Bayesian classifier based on the number of corrected classified DNS tunneling instances. Experimental results demonstrate the efficacy of the proposed SVM classification method by obtaining an f-measure of 0.80.

  2. Comparisons of likelihood and machine learning methods of individual classification

    Science.gov (United States)

    Guinand, B.; Topchy, A.; Page, K.S.; Burnham-Curtis, M. K.; Punch, W.F.; Scribner, K.T.

    2002-01-01

    Classification methods used in machine learning (e.g., artificial neural networks, decision trees, and k-nearest neighbor clustering) are rarely used with population genetic data. We compare different nonparametric machine learning techniques with parametric likelihood estimations commonly employed in population genetics for purposes of assigning individuals to their population of origin (“assignment tests”). Classifier accuracy was compared across simulated data sets representing different levels of population differentiation (low and high FST), number of loci surveyed (5 and 10), and allelic diversity (average of three or eight alleles per locus). Empirical data for the lake trout (Salvelinus namaycush) exhibiting levels of population differentiation comparable to those used in simulations were examined to further evaluate and compare classification methods. Classification error rates associated with artificial neural networks and likelihood estimators were lower for simulated data sets compared to k-nearest neighbor and decision tree classifiers over the entire range of parameters considered. Artificial neural networks only marginally outperformed the likelihood method for simulated data (0–2.8% lower error rates). The relative performance of each machine learning classifier improved relative likelihood estimators for empirical data sets, suggesting an ability to “learn” and utilize properties of empirical genotypic arrays intrinsic to each population. Likelihood-based estimation methods provide a more accessible option for reliable assignment of individuals to the population of origin due to the intricacies in development and evaluation of artificial neural networks. In recent years, characterization of highly polymorphic molecular markers such as mini- and microsatellites and development of novel methods of analysis have enabled researchers to extend investigations of ecological and evolutionary processes below the population level to the level of

  3. A Photometric Machine-Learning Method to Infer Stellar Metallicity

    Science.gov (United States)

    Miller, Adam A.

    2015-01-01

    Following its formation, a star's metal content is one of the few factors that can significantly alter its evolution. Measurements of stellar metallicity ([Fe/H]) typically require a spectrum, but spectroscopic surveys are limited to a few x 10(exp 6) targets; photometric surveys, on the other hand, have detected > 10(exp 9) stars. I present a new machine-learning method to predict [Fe/H] from photometric colors measured by the Sloan Digital Sky Survey (SDSS). The training set consists of approx. 120,000 stars with SDSS photometry and reliable [Fe/H] measurements from the SEGUE Stellar Parameters Pipeline (SSPP). For bright stars (g' < or = 18 mag), with 4500 K < or = Teff < or = 7000 K, corresponding to those with the most reliable SSPP estimates, I find that the model predicts [Fe/H] values with a root-mean-squared-error (RMSE) of approx.0.27 dex. The RMSE from this machine-learning method is similar to the scatter in [Fe/H] measurements from low-resolution spectra..

  4. Machine Learning Methods for Attack Detection in the Smart Grid.

    Science.gov (United States)

    Ozay, Mete; Esnaola, Inaki; Yarman Vural, Fatos Tunay; Kulkarni, Sanjeev R; Poor, H Vincent

    2016-08-01

    Attack detection problems in the smart grid are posed as statistical learning problems for different attack scenarios in which the measurements are observed in batch or online settings. In this approach, machine learning algorithms are used to classify measurements as being either secure or attacked. An attack detection framework is provided to exploit any available prior knowledge about the system and surmount constraints arising from the sparse structure of the problem in the proposed approach. Well-known batch and online learning algorithms (supervised and semisupervised) are employed with decision- and feature-level fusion to model the attack detection problem. The relationships between statistical and geometric properties of attack vectors employed in the attack scenarios and learning algorithms are analyzed to detect unobservable attacks using statistical learning methods. The proposed algorithms are examined on various IEEE test systems. Experimental analyses show that machine learning algorithms can detect attacks with performances higher than attack detection algorithms that employ state vector estimation methods in the proposed attack detection framework.

  5. A method of numerically controlled machine part programming

    Science.gov (United States)

    1970-01-01

    Computer program is designed for automatically programmed tools. Preprocessor computes desired tool path and postprocessor computes actual commands causing machine tool to follow specific path. It is used on a Cincinnati ATC-430 numerically controlled machine tool.

  6. A Photometric Machine-Learning Method to Infer Stellar Metallicity

    Science.gov (United States)

    Miller, Adam A.

    2015-01-01

    Following its formation, a star's metal content is one of the few factors that can significantly alter its evolution. Measurements of stellar metallicity ([Fe/H]) typically require a spectrum, but spectroscopic surveys are limited to a few x 10(exp 6) targets; photometric surveys, on the other hand, have detected > 10(exp 9) stars. I present a new machine-learning method to predict [Fe/H] from photometric colors measured by the Sloan Digital Sky Survey (SDSS). The training set consists of approx. 120,000 stars with SDSS photometry and reliable [Fe/H] measurements from the SEGUE Stellar Parameters Pipeline (SSPP). For bright stars (g' learning method is similar to the scatter in [Fe/H] measurements from low-resolution spectra..

  7. Kernel methods for interpretable machine learning of order parameters

    Science.gov (United States)

    Ponte, Pedro; Melko, Roger G.

    2017-11-01

    Machine learning is capable of discriminating phases of matter, and finding associated phase transitions, directly from large data sets of raw state configurations. In the context of condensed matter physics, most progress in the field of supervised learning has come from employing neural networks as classifiers. Although very powerful, such algorithms suffer from a lack of interpretability, which is usually desired in scientific applications in order to associate learned features with physical phenomena. In this paper, we explore support vector machines (SVMs), which are a class of supervised kernel methods that provide interpretable decision functions. We find that SVMs can learn the mathematical form of physical discriminators, such as order parameters and Hamiltonian constraints, for a set of two-dimensional spin models: the ferromagnetic Ising model, a conserved-order-parameter Ising model, and the Ising gauge theory. The ability of SVMs to provide interpretable classification highlights their potential for automating feature detection in both synthetic and experimental data sets for condensed matter and other many-body systems.

  8. An RTT-Aware Virtual Machine Placement Method

    Directory of Open Access Journals (Sweden)

    Li Quan

    2017-12-01

    Full Text Available Virtualization is a key technology for mobile cloud computing (MCC and the virtual machine (VM is a core component of virtualization. VM provides a relatively independent running environment for different applications. Therefore, the VM placement problem focuses on how to place VMs on optimal physical machines, which ensures efficient use of resources and the quality of service, etc. Most previous work focuses on energy consumption, network traffic between VMs and so on and rarely consider the delay for end users’ requests. In contrast, the latency between requests and VMs is considered in this paper for the scenario of optimal VM placement in MCC. In order to minimize average RTT for all requests, the round-trip time (RTT is first used as the metric for the latency of requests. Based on our proposed RTT metric, an RTT-Aware VM placement algorithm is then proposed to minimize the average RTT. Furthermore, the case in which one of the core switches does not work is considered. A VM rescheduling algorithm is proposed to keep the average RTT lower and reduce the fluctuation of the average RTT. Finally, in the simulation study, our algorithm shows its advantage over existing methods, including random placement, the traffic-aware VM placement algorithm and the remaining utilization-aware algorithm.

  9. Modeling Music Emotion Judgments Using Machine Learning Methods

    Directory of Open Access Journals (Sweden)

    Naresh N. Vempala

    2018-01-01

    Full Text Available Emotion judgments and five channels of physiological data were obtained from 60 participants listening to 60 music excerpts. Various machine learning (ML methods were used to model the emotion judgments inclusive of neural networks, linear regression, and random forests. Input for models of perceived emotion consisted of audio features extracted from the music recordings. Input for models of felt emotion consisted of physiological features extracted from the physiological recordings. Models were trained and interpreted with consideration of the classic debate in music emotion between cognitivists and emotivists. Our models supported a hybrid position wherein emotion judgments were influenced by a combination of perceived and felt emotions. In comparing the different ML approaches that were used for modeling, we conclude that neural networks were optimal, yielding models that were flexible as well as interpretable. Inspection of a committee machine, encompassing an ensemble of networks, revealed that arousal judgments were predominantly influenced by felt emotion, whereas valence judgments were predominantly influenced by perceived emotion.

  10. Object-Oriented Support for Adaptive Methods on Paranel Machines

    Directory of Open Access Journals (Sweden)

    Sandeep Bhatt

    1993-01-01

    Full Text Available This article reports on experiments from our ongoing project whose goal is to develop a C++ library which supports adaptive and irregular data structures on distributed memory supercomputers. We demonstrate the use of our abstractions in implementing "tree codes" for large-scale N-body simulations. These algorithms require dynamically evolving treelike data structures, as well as load-balancing, both of which are widely believed to make the application difficult and cumbersome to program for distributed-memory machines. The ease of writing the application code on top of our C++ library abstractions (which themselves are application independent, and the low overhead of the resulting C++ code (over hand-crafted C code supports our belief that object-oriented approaches are eminently suited to programming distributed-memory machines in a manner that (to the applications programmer is architecture-independent. Our contribution in parallel programming methodology is to identify and encapsulate general classes of communication and load-balancing strategies useful across applications and MIMD architectures. This article reports experimental results from simulations of half a million particles using multiple methods.

  11. Method to Increase the Coupling Force in a Construction Machine

    Directory of Open Access Journals (Sweden)

    Tsipurskij Il’ja

    2017-01-01

    Full Text Available This paper discusses a possible method to increase the coupling tractive force track-wheel locomotion of construction machines. Sufficient tractive coupling force allows organizing translational displacement of the machine under above-medium load modes during operation of overburden chain excavators, tower cranes and gantry cranes in outdoors environments. A mechanism is examined to convert rotary motion into rectilinear motion using the example of a gear and rail, with kinematic calculations quoted. Analysis of the “force couple” system is proposed to identify free traction forces. Factors are established that influence the machine’s working movements. Equations to calculate tractive forces in track-wheel locomotion are described. A laboratory complex is presented where students of mechanical engineering gain practical skills in mastering the production process of soil excavation and the influence of the coupling tractive force during the machine’s operation. As practical recommendation, the paper describes a device made of a balancing lever, drive cogwheel and tractive chain to implement the required tractive force of the trolley in coupling; this solution’s efficiency is demonstrated for experimental works on hard soils with high coefficient of difficulty.

  12. A particle finite element method for machining simulations

    Science.gov (United States)

    Sabel, Matthias; Sator, Christian; Müller, Ralf

    2014-07-01

    The particle finite element method (PFEM) appears to be a convenient technique for machining simulations, since the geometry and topology of the problem can undergo severe changes. In this work, a short outline of the PFEM-algorithm is given, which is followed by a detailed description of the involved operations. The -shape method, which is used to track the topology, is explained and tested by a simple example. Also the kinematics and a suitable finite element formulation are introduced. To validate the method simple settings without topological changes are considered and compared to the standard finite element method for large deformations. To examine the performance of the method, when dealing with separating material, a tensile loading is applied to a notched plate. This investigation includes a numerical analysis of the different meshing parameters, and the numerical convergence is studied. With regard to the cutting simulation it is found that only a sufficiently large number of particles (and thus a rather fine finite element discretisation) leads to converged results of process parameters, such as the cutting force.

  13. Advanced methods in NDE using machine learning approaches

    Science.gov (United States)

    Wunderlich, Christian; Tschöpe, Constanze; Duckhorn, Frank

    2018-04-01

    Machine learning (ML) methods and algorithms have been applied recently with great success in quality control and predictive maintenance. Its goal to build new and/or leverage existing algorithms to learn from training data and give accurate predictions, or to find patterns, particularly with new and unseen similar data, fits perfectly to Non-Destructive Evaluation. The advantages of ML in NDE are obvious in such tasks as pattern recognition in acoustic signals or automated processing of images from X-ray, Ultrasonics or optical methods. Fraunhofer IKTS is using machine learning algorithms in acoustic signal analysis. The approach had been applied to such a variety of tasks in quality assessment. The principal approach is based on acoustic signal processing with a primary and secondary analysis step followed by a cognitive system to create model data. Already in the second analysis steps unsupervised learning algorithms as principal component analysis are used to simplify data structures. In the cognitive part of the software further unsupervised and supervised learning algorithms will be trained. Later the sensor signals from unknown samples can be recognized and classified automatically by the algorithms trained before. Recently the IKTS team was able to transfer the software for signal processing and pattern recognition to a small printed circuit board (PCB). Still, algorithms will be trained on an ordinary PC; however, trained algorithms run on the Digital Signal Processor and the FPGA chip. The identical approach will be used for pattern recognition in image analysis of OCT pictures. Some key requirements have to be fulfilled, however. A sufficiently large set of training data, a high signal-to-noise ratio, and an optimized and exact fixation of components are required. The automated testing can be done subsequently by the machine. By integrating the test data of many components along the value chain further optimization including lifetime and durability

  14. Employing Machine-Learning Methods to Study Young Stellar Objects

    Science.gov (United States)

    Moore, Nicholas

    2018-01-01

    Vast amounts of data exist in the astronomical data archives, and yet a large number of sources remain unclassified. We developed a multi-wavelength pipeline to classify infrared sources. The pipeline uses supervised machine learning methods to classify objects into the appropriate categories. The program is fed data that is already classified to train it, and is then applied to unknown catalogues. The primary use for such a pipeline is the rapid classification and cataloging of data that would take a much longer time to classify otherwise. While our primary goal is to study young stellar objects (YSOs), the applications extend beyond the scope of this project. We present preliminary results from our analysis and discuss future applications.

  15. Statistical and Machine Learning forecasting methods: Concerns and ways forward.

    Science.gov (United States)

    Makridakis, Spyros; Spiliotis, Evangelos; Assimakopoulos, Vassilios

    2018-01-01

    Machine Learning (ML) methods have been proposed in the academic literature as alternatives to statistical ones for time series forecasting. Yet, scant evidence is available about their relative performance in terms of accuracy and computational requirements. The purpose of this paper is to evaluate such performance across multiple forecasting horizons using a large subset of 1045 monthly time series used in the M3 Competition. After comparing the post-sample accuracy of popular ML methods with that of eight traditional statistical ones, we found that the former are dominated across both accuracy measures used and for all forecasting horizons examined. Moreover, we observed that their computational requirements are considerably greater than those of statistical methods. The paper discusses the results, explains why the accuracy of ML models is below that of statistical ones and proposes some possible ways forward. The empirical results found in our research stress the need for objective and unbiased ways to test the performance of forecasting methods that can be achieved through sizable and open competitions allowing meaningful comparisons and definite conclusions.

  16. Statistical and Machine Learning forecasting methods: Concerns and ways forward

    Science.gov (United States)

    Makridakis, Spyros; Assimakopoulos, Vassilios

    2018-01-01

    Machine Learning (ML) methods have been proposed in the academic literature as alternatives to statistical ones for time series forecasting. Yet, scant evidence is available about their relative performance in terms of accuracy and computational requirements. The purpose of this paper is to evaluate such performance across multiple forecasting horizons using a large subset of 1045 monthly time series used in the M3 Competition. After comparing the post-sample accuracy of popular ML methods with that of eight traditional statistical ones, we found that the former are dominated across both accuracy measures used and for all forecasting horizons examined. Moreover, we observed that their computational requirements are considerably greater than those of statistical methods. The paper discusses the results, explains why the accuracy of ML models is below that of statistical ones and proposes some possible ways forward. The empirical results found in our research stress the need for objective and unbiased ways to test the performance of forecasting methods that can be achieved through sizable and open competitions allowing meaningful comparisons and definite conclusions. PMID:29584784

  17. Newton Methods for Large Scale Problems in Machine Learning

    Science.gov (United States)

    Hansen, Samantha Leigh

    2014-01-01

    The focus of this thesis is on practical ways of designing optimization algorithms for minimizing large-scale nonlinear functions with applications in machine learning. Chapter 1 introduces the overarching ideas in the thesis. Chapters 2 and 3 are geared towards supervised machine learning applications that involve minimizing a sum of loss…

  18. The research progress of perforating gun inner wall blind hole machining method

    Science.gov (United States)

    Wang, Zhe; Shen, Hongbing

    2018-04-01

    Blind hole processing method has been a concerned technical problem in oil, electronics, aviation and other fields. This paper introduces different methods for blind hole machining, focus on machining method for perforating gun inner wall blind hole processing. Besides, the advantages and disadvantages of different methods are also discussed, and the development trend of blind hole processing were introduced significantly.

  19. A review for detecting gene-gene interactions using machine learning methods in genetic epidemiology.

    Science.gov (United States)

    Koo, Ching Lee; Liew, Mei Jing; Mohamad, Mohd Saberi; Salleh, Abdul Hakim Mohamed

    2013-01-01

    Recently, the greatest statistical computational challenge in genetic epidemiology is to identify and characterize the genes that interact with other genes and environment factors that bring the effect on complex multifactorial disease. These gene-gene interactions are also denoted as epitasis in which this phenomenon cannot be solved by traditional statistical method due to the high dimensionality of the data and the occurrence of multiple polymorphism. Hence, there are several machine learning methods to solve such problems by identifying such susceptibility gene which are neural networks (NNs), support vector machine (SVM), and random forests (RFs) in such common and multifactorial disease. This paper gives an overview on machine learning methods, describing the methodology of each machine learning methods and its application in detecting gene-gene and gene-environment interactions. Lastly, this paper discussed each machine learning method and presents the strengths and weaknesses of each machine learning method in detecting gene-gene interactions in complex human disease.

  20. Machine Learning Methods for Prediction of CDK-Inhibitors

    Science.gov (United States)

    Ramana, Jayashree; Gupta, Dinesh

    2010-01-01

    Progression through the cell cycle involves the coordinated activities of a suite of cyclin/cyclin-dependent kinase (CDK) complexes. The activities of the complexes are regulated by CDK inhibitors (CDKIs). Apart from its role as cell cycle regulators, CDKIs are involved in apoptosis, transcriptional regulation, cell fate determination, cell migration and cytoskeletal dynamics. As the complexes perform crucial and diverse functions, these are important drug targets for tumour and stem cell therapeutic interventions. However, CDKIs are represented by proteins with considerable sequence heterogeneity and may fail to be identified by simple similarity search methods. In this work we have evaluated and developed machine learning methods for identification of CDKIs. We used different compositional features and evolutionary information in the form of PSSMs, from CDKIs and non-CDKIs for generating SVM and ANN classifiers. In the first stage, both the ANN and SVM models were evaluated using Leave-One-Out Cross-Validation and in the second stage these were tested on independent data sets. The PSSM-based SVM model emerged as the best classifier in both the stages and is publicly available through a user-friendly web interface at http://bioinfo.icgeb.res.in/cdkipred. PMID:20967128

  1. Machine-learning methods in the classification of water bodies

    Directory of Open Access Journals (Sweden)

    Sołtysiak Marek

    2016-06-01

    Full Text Available Amphibian species have been considered as useful ecological indicators. They are used as indicators of environmental contamination, ecosystem health and habitat quality., Amphibian species are sensitive to changes in the aquatic environment and therefore, may form the basis for the classification of water bodies. Water bodies in which there are a large number of amphibian species are especially valuable even if they are located in urban areas. The automation of the classification process allows for a faster evaluation of the presence of amphibian species in the water bodies. Three machine-learning methods (artificial neural networks, decision trees and the k-nearest neighbours algorithm have been used to classify water bodies in Chorzów – one of 19 cities in the Upper Silesia Agglomeration. In this case, classification is a supervised data mining method consisting of several stages such as building the model, the testing phase and the prediction. Seven natural and anthropogenic features of water bodies (e.g. the type of water body, aquatic plants, the purpose of the water body (destination, position of the water body in relation to any possible buildings, condition of the water body, the degree of littering, the shore type and fishing activities have been taken into account in the classification. The data set used in this study involved information about 71 different water bodies and 9 amphibian species living in them. The results showed that the best average classification accuracy was obtained with the multilayer perceptron neural network.

  2. Recent Advances in Conotoxin Classification by Using Machine Learning Methods.

    Science.gov (United States)

    Dao, Fu-Ying; Yang, Hui; Su, Zhen-Dong; Yang, Wuritu; Wu, Yun; Hui, Ding; Chen, Wei; Tang, Hua; Lin, Hao

    2017-06-25

    Conotoxins are disulfide-rich small peptides, which are invaluable peptides that target ion channel and neuronal receptors. Conotoxins have been demonstrated as potent pharmaceuticals in the treatment of a series of diseases, such as Alzheimer's disease, Parkinson's disease, and epilepsy. In addition, conotoxins are also ideal molecular templates for the development of new drug lead compounds and play important roles in neurobiological research as well. Thus, the accurate identification of conotoxin types will provide key clues for the biological research and clinical medicine. Generally, conotoxin types are confirmed when their sequence, structure, and function are experimentally validated. However, it is time-consuming and costly to acquire the structure and function information by using biochemical experiments. Therefore, it is important to develop computational tools for efficiently and effectively recognizing conotoxin types based on sequence information. In this work, we reviewed the current progress in computational identification of conotoxins in the following aspects: (i) construction of benchmark dataset; (ii) strategies for extracting sequence features; (iii) feature selection techniques; (iv) machine learning methods for classifying conotoxins; (v) the results obtained by these methods and the published tools; and (vi) future perspectives on conotoxin classification. The paper provides the basis for in-depth study of conotoxins and drug therapy research.

  3. A review of machine learning methods to predict the solubility of overexpressed recombinant proteins in Escherichia coli.

    Science.gov (United States)

    Habibi, Narjeskhatoon; Mohd Hashim, Siti Z; Norouzi, Alireza; Samian, Mohammed Razip

    2014-05-08

    Over the last 20 years in biotechnology, the production of recombinant proteins has been a crucial bioprocess in both biopharmaceutical and research arena in terms of human health, scientific impact and economic volume. Although logical strategies of genetic engineering have been established, protein overexpression is still an art. In particular, heterologous expression is often hindered by low level of production and frequent fail due to opaque reasons. The problem is accentuated because there is no generic solution available to enhance heterologous overexpression. For a given protein, the extent of its solubility can indicate the quality of its function. Over 30% of synthesized proteins are not soluble. In certain experimental circumstances, including temperature, expression host, etc., protein solubility is a feature eventually defined by its sequence. Until now, numerous methods based on machine learning are proposed to predict the solubility of protein merely from its amino acid sequence. In spite of the 20 years of research on the matter, no comprehensive review is available on the published methods. This paper presents an extensive review of the existing models to predict protein solubility in Escherichia coli recombinant protein overexpression system. The models are investigated and compared regarding the datasets used, features, feature selection methods, machine learning techniques and accuracy of prediction. A discussion on the models is provided at the end. This study aims to investigate extensively the machine learning based methods to predict recombinant protein solubility, so as to offer a general as well as a detailed understanding for researches in the field. Some of the models present acceptable prediction performances and convenient user interfaces. These models can be considered as valuable tools to predict recombinant protein overexpression results before performing real laboratory experiments, thus saving labour, time and cost.

  4. Method and apparatus for characterizing and enhancing the functional performance of machine tools

    Science.gov (United States)

    Barkman, William E; Babelay, Jr., Edwin F; Smith, Kevin Scott; Assaid, Thomas S; McFarland, Justin T; Tursky, David A; Woody, Bethany; Adams, David

    2013-04-30

    Disclosed are various systems and methods for assessing and improving the capability of a machine tool. The disclosure applies to machine tools having at least one slide configured to move along a motion axis. Various patterns of dynamic excitation commands are employed to drive the one or more slides, typically involving repetitive short distance displacements. A quantification of a measurable merit of machine tool response to the one or more patterns of dynamic excitation commands is typically derived for the machine tool. Examples of measurable merits of machine tool performance include workpiece surface finish, and the ability to generate chips of the desired length.

  5. Fault Diagnosis of Batch Reactor Using Machine Learning Methods

    Directory of Open Access Journals (Sweden)

    Sujatha Subramanian

    2014-01-01

    Full Text Available Fault diagnosis of a batch reactor gives the early detection of fault and minimizes the risk of thermal runaway. It provides superior performance and helps to improve safety and consistency. It has become more vital in this technical era. In this paper, support vector machine (SVM is used to estimate the heat release (Qr of the batch reactor both normal and faulty conditions. The signature of the residual, which is obtained from the difference between nominal and estimated faulty Qr values, characterizes the different natures of faults occurring in the batch reactor. Appropriate statistical and geometric features are extracted from the residual signature and the total numbers of features are reduced using SVM attribute selection filter and principle component analysis (PCA techniques. artificial neural network (ANN classifiers like multilayer perceptron (MLP, radial basis function (RBF, and Bayes net are used to classify the different types of faults from the reduced features. It is observed from the result of the comparative study that the proposed method for fault diagnosis with limited number of features extracted from only one estimated parameter (Qr shows that it is more efficient and fast for diagnosing the typical faults.

  6. A method of size inspection for fruit with machine vision

    Science.gov (United States)

    Rao, Xiuqin; Ying, Yibin

    2005-11-01

    A real time machine vision system for fruit quality inspection was developed, which consists of rollers, an encoder, a lighting chamber, a TMS-7DSP CCD camera (PULNIX Inc.), a computer (P4 1.8G, 128M) and a set of grading controller. An image was binary, and the edge was detected with line-scanned based digit image description, and the MER was applied to detected size of the fruit, but failed. The reason for the result was that the test point with MER was different from which was done with vernier caliper. An improved method was developed, which was called as software vernier caliper. A line between weight O of the fruit and a point A on the edge was drawn, and then the crossed point between line OA and the edge was calculated, which was noted as B, a point C between AB was selected, and the point D on the other side was searched by a way to make CD was vertical to AB, by move the point C between point A and B, A new point D was searched. The maximum length of CD was recorded as an extremum value. By move point A from start to the half point on the edge, a serial of CD was gotten. 80 navel oranges were tested, the maximum error of the diameter was less than 1mm.

  7. Sparse Machine Learning Methods for Understanding Large Text Corpora

    Data.gov (United States)

    National Aeronautics and Space Administration — Sparse machine learning has recently emerged as powerful tool to obtain models of high-dimensional data with high degree of interpretability, at low computational...

  8. Micro transport machine and methods for using same

    Science.gov (United States)

    Stalford, Harold

    2015-10-13

    A micro transport machine may include a substrate and a movable device comprising a drive component responsive to a wireless power source. The movable device is operable to move between a plurality of disparate areas on the substrate.

  9. Machine learning methods can replace 3D profile method in classification of amyloidogenic hexapeptides

    Directory of Open Access Journals (Sweden)

    Stanislawski Jerzy

    2013-01-01

    Full Text Available Abstract Background Amyloids are proteins capable of forming fibrils. Many of them underlie serious diseases, like Alzheimer disease. The number of amyloid-associated diseases is constantly increasing. Recent studies indicate that amyloidogenic properties can be associated with short segments of aminoacids, which transform the structure when exposed. A few hundreds of such peptides have been experimentally found. Experimental testing of all possible aminoacid combinations is currently not feasible. Instead, they can be predicted by computational methods. 3D profile is a physicochemical-based method that has generated the most numerous dataset - ZipperDB. However, it is computationally very demanding. Here, we show that dataset generation can be accelerated. Two methods to increase the classification efficiency of amyloidogenic candidates are presented and tested: simplified 3D profile generation and machine learning methods. Results We generated a new dataset of hexapeptides, using more economical 3D profile algorithm, which showed very good classification overlap with ZipperDB (93.5%. The new part of our dataset contains 1779 segments, with 204 classified as amyloidogenic. The dataset of 6-residue sequences with their binary classification, based on the energy of the segment, was applied for training machine learning methods. A separate set of sequences from ZipperDB was used as a test set. The most effective methods were Alternating Decision Tree and Multilayer Perceptron. Both methods obtained area under ROC curve of 0.96, accuracy 91%, true positive rate ca. 78%, and true negative rate 95%. A few other machine learning methods also achieved a good performance. The computational time was reduced from 18-20 CPU-hours (full 3D profile to 0.5 CPU-hours (simplified 3D profile to seconds (machine learning. Conclusions We showed that the simplified profile generation method does not introduce an error with regard to the original method, while

  10. Machine learning methods can replace 3D profile method in classification of amyloidogenic hexapeptides.

    Science.gov (United States)

    Stanislawski, Jerzy; Kotulska, Malgorzata; Unold, Olgierd

    2013-01-17

    Amyloids are proteins capable of forming fibrils. Many of them underlie serious diseases, like Alzheimer disease. The number of amyloid-associated diseases is constantly increasing. Recent studies indicate that amyloidogenic properties can be associated with short segments of aminoacids, which transform the structure when exposed. A few hundreds of such peptides have been experimentally found. Experimental testing of all possible aminoacid combinations is currently not feasible. Instead, they can be predicted by computational methods. 3D profile is a physicochemical-based method that has generated the most numerous dataset - ZipperDB. However, it is computationally very demanding. Here, we show that dataset generation can be accelerated. Two methods to increase the classification efficiency of amyloidogenic candidates are presented and tested: simplified 3D profile generation and machine learning methods. We generated a new dataset of hexapeptides, using more economical 3D profile algorithm, which showed very good classification overlap with ZipperDB (93.5%). The new part of our dataset contains 1779 segments, with 204 classified as amyloidogenic. The dataset of 6-residue sequences with their binary classification, based on the energy of the segment, was applied for training machine learning methods. A separate set of sequences from ZipperDB was used as a test set. The most effective methods were Alternating Decision Tree and Multilayer Perceptron. Both methods obtained area under ROC curve of 0.96, accuracy 91%, true positive rate ca. 78%, and true negative rate 95%. A few other machine learning methods also achieved a good performance. The computational time was reduced from 18-20 CPU-hours (full 3D profile) to 0.5 CPU-hours (simplified 3D profile) to seconds (machine learning). We showed that the simplified profile generation method does not introduce an error with regard to the original method, while increasing the computational efficiency. Our new dataset

  11. Integrating Heuristic and Machine-Learning Methods for Efficient Virtual Machine Allocation in Data Centers

    OpenAIRE

    Pahlevan, Ali; Qu, Xiaoyu; Zapater Sancho, Marina; Atienza Alonso, David

    2017-01-01

    Modern cloud data centers (DCs) need to tackle efficiently the increasing demand for computing resources and address the energy efficiency challenge. Therefore, it is essential to develop resource provisioning policies that are aware of virtual machine (VM) characteristics, such as CPU utilization and data communication, and applicable in dynamic scenarios. Traditional approaches fall short in terms of flexibility and applicability for large-scale DC scenarios. In this paper we propose a heur...

  12. On the Use of Machine Learning for Identifying Botnet Network Traffic

    DEFF Research Database (Denmark)

    Stevanovic, Matija; Pedersen, Jens Myrup

    2016-01-01

    contemporary approaches use machine learning techniques for identifying malicious traffic. This paper presents a survey of contemporary botnet detection methods that rely on machine learning for identifying botnet network traffic. The paper provides a comprehensive overview on the existing scientific work thus...... contributing to the better understanding of capabilities, limitations and opportunities of using machine learning for identifying botnet traffic. Furthermore, the paper outlines possibilities for the future development of machine learning-based botnet detection systems....

  13. SWCD: a sliding window and self-regulated learning-based background updating method for change detection in videos

    Science.gov (United States)

    Işık, Şahin; Özkan, Kemal; Günal, Serkan; Gerek, Ömer Nezih

    2018-03-01

    Change detection with background subtraction process remains to be an unresolved issue and attracts research interest due to challenges encountered on static and dynamic scenes. The key challenge is about how to update dynamically changing backgrounds from frames with an adaptive and self-regulated feedback mechanism. In order to achieve this, we present an effective change detection algorithm for pixelwise changes. A sliding window approach combined with dynamic control of update parameters is introduced for updating background frames, which we called sliding window-based change detection. Comprehensive experiments on related test videos show that the integrated algorithm yields good objective and subjective performance by overcoming illumination variations, camera jitters, and intermittent object motions. It is argued that the obtained method makes a fair alternative in most types of foreground extraction scenarios; unlike case-specific methods, which normally fail for their nonconsidered scenarios.

  14. Rotating electrical machines part 2 : methods for determining losses and efficiency of rotating electrical machinery form tests (excl. machines for traction vehicles)

    CERN Document Server

    International Electrotechnical Commission. Geneva

    1972-01-01

    Applies to d.c. machines and to a.c. synchronous and induction machines. The principles can be applied to other types of machines such as rotary converters, a.c. commutator motors and single-phase induction motors for which other methods of determining losses are used.

  15. Predicting Solar Activity Using Machine-Learning Methods

    Science.gov (United States)

    Bobra, M.

    2017-12-01

    Of all the activity observed on the Sun, two of the most energetic events are flares and coronal mass ejections. However, we do not, as of yet, fully understand the physical mechanism that triggers solar eruptions. A machine-learning algorithm, which is favorable in cases where the amount of data is large, is one way to [1] empirically determine the signatures of this mechanism in solar image data and [2] use them to predict solar activity. In this talk, we discuss the application of various machine learning algorithms - specifically, a Support Vector Machine, a sparse linear regression (Lasso), and Convolutional Neural Network - to image data from the photosphere, chromosphere, transition region, and corona taken by instruments aboard the Solar Dynamics Observatory in order to predict solar activity on a variety of time scales. Such an approach may be useful since, at the present time, there are no physical models of flares available for real-time prediction. We discuss our results (Bobra and Couvidat, 2015; Bobra and Ilonidis, 2016; Jonas et al., 2017) as well as other attempts to predict flares using machine-learning (e.g. Ahmed et al., 2013; Nishizuka et al. 2017) and compare these results with the more traditional techniques used by the NOAA Space Weather Prediction Center (Crown, 2012). We also discuss some of the challenges in using machine-learning algorithms for space science applications.

  16. Deep learning versus traditional machine learning methods for aggregated energy demand prediction

    NARCIS (Netherlands)

    Paterakis, N.G.; Mocanu, E.; Gibescu, M.; Stappers, B.; van Alst, W.

    2018-01-01

    In this paper the more advanced, in comparison with traditional machine learning approaches, deep learning methods are explored with the purpose of accurately predicting the aggregated energy consumption. Despite the fact that a wide range of machine learning methods have been applied to

  17. Evaluation of machining effect for the residual stress of SA508 by hole drilling method

    International Nuclear Information System (INIS)

    Lee, Jeong Kun; Lee, Kyoung Soo; Song, Ki O; Kim, Young Shin

    2009-01-01

    Residual stresses on a surface of the material are welcome or undesirable since it's direction, compression or tensile. But especially for the fatigue, it is not negligible effect on the material strength. These residual stresses developed during the manufacturing processes involving material deformation, heat treatment, machining. The object of this paper is verifying the effect of machining what is mostly used for SA508. For verifying the effect of machining, three different kind of machining have been achieved, milling, grinding, wire cutting. Also to measure the residual stress, hole drill method and indentation method are used.

  18. Evaluation of Machine Learning Methods for LHC Optics Measurements and Corrections Software

    CERN Document Server

    AUTHOR|(CDS)2206853; Henning, Peter

    The field of artificial intelligence is driven by the goal to provide machines with human-like intelligence. However modern science is currently facing problems with high complexity that cannot be solved by humans in the same timescale as by machines. Therefore there is a demand on automation of complex tasks. To identify the category of tasks which can be performed by machines in the domain of optics measurements and correction on the Large Hadron Collider (LHC) is one of the central research subjects of this thesis. The application of machine learning methods and concepts of artificial intelligence can be found in various industry and scientific branches. In High Energy Physics these concepts are mostly used in offline analysis of experiments data and to perform regression tasks. In Accelerator Physics the machine learning approach has not found a wide application yet. Therefore potential tasks for machine learning solutions can be specified in this domain. The appropriate methods and their suitability for...

  19. An inline surface measurement method for membrane mirror fabrication using two-stage trained Zernike polynomials and elitist teaching–learning-based optimization

    International Nuclear Information System (INIS)

    Liu, Yang; Chen, Zhenyu; Yang, Zhile; Li, Kang; Tan, Jiubin

    2016-01-01

    The accuracy of surface measurement determines the manufacturing quality of membrane mirrors. Thus, an efficient and accurate measuring method is critical in membrane mirror fabrication. This paper formulates this measurement issue as a surface reconstruction problem and employs two-stage trained Zernike polynomials as an inline measuring tool to solve the optical surface measurement problem in the membrane mirror manufacturing process. First, all terms of the Zernike polynomial are generated and projected to a non-circular region as the candidate model pool. The training data are calculated according to the measured values of distance sensors and the geometrical relationship between the ideal surface and the installed sensors. Then the terms are selected by minimizing the cost function each time successively. To avoid the problem of ill-conditioned matrix inversion by the least squares method, the coefficient of each model term is achieved by modified elitist teaching–learning-based optimization. Subsequently, the measurement precision is further improved by a second stage of model refinement. Finally, every point on the membrane surface can be measured according to this model, providing more the subtle feedback information needed for the precise control of membrane mirror fabrication. Experimental results confirm that the proposed method is effective in a membrane mirror manufacturing system driven by negative pressure, and the measurement accuracy can achieve 15 µ m. (paper)

  20. APPLICATION OF THE PERFORMANCE SELECTION INDEX METHOD FOR SOLVING MACHINING MCDM PROBLEMS

    Directory of Open Access Journals (Sweden)

    Dušan Petković

    2017-04-01

    Full Text Available Complex nature of machining processes requires the use of different methods and techniques for process optimization. Over the past few years a number of different optimization methods have been proposed for solving continuous machining optimization problems. In manufacturing environment, engineers are also facing a number of discrete machining optimization problems. In order to help decision makers in solving this type of optimization problems a number of multi criteria decision making (MCDM methods have been proposed. This paper introduces the use of an almost unexplored MCDM method, i.e. performance selection index (PSI method for solving machining MCDM problems. The main motivation for using the PSI method is that it is not necessary to determine criteria weights as in other MCDM methods. Applicability and effectiveness of the PSI method have been demonstrated while solving two case studies dealing with machinability of materials and selection of the most suitable cutting fluid for the given machining application. The obtained rankings have good correlation with those derived by the past researchers using other MCDM methods which validate the usefulness of this method for solving machining MCDM problems.

  1. Assessing and comparison of different machine learning methods in parent-offspring trios for genotype imputation.

    Science.gov (United States)

    Mikhchi, Abbas; Honarvar, Mahmood; Kashan, Nasser Emam Jomeh; Aminafshar, Mehdi

    2016-06-21

    Genotype imputation is an important tool for prediction of unknown genotypes for both unrelated individuals and parent-offspring trios. Several imputation methods are available and can either employ universal machine learning methods, or deploy algorithms dedicated to infer missing genotypes. In this research the performance of eight machine learning methods: Support Vector Machine, K-Nearest Neighbors, Extreme Learning Machine, Radial Basis Function, Random Forest, AdaBoost, LogitBoost, and TotalBoost compared in terms of the imputation accuracy, computation time and the factors affecting imputation accuracy. The methods employed using real and simulated datasets to impute the un-typed SNPs in parent-offspring trios. The tested methods show that imputation of parent-offspring trios can be accurate. The Random Forest and Support Vector Machine were more accurate than the other machine learning methods. The TotalBoost performed slightly worse than the other methods.The running times were different between methods. The ELM was always most fast algorithm. In case of increasing the sample size, the RBF requires long imputation time.The tested methods in this research can be an alternative for imputation of un-typed SNPs in low missing rate of data. However, it is recommended that other machine learning methods to be used for imputation. Copyright © 2016 Elsevier Ltd. All rights reserved.

  2. An Improved Optimization Method for the Relevance Voxel Machine

    DEFF Research Database (Denmark)

    Ganz, Melanie; Sabuncu, M. R.; Van Leemput, Koen

    2013-01-01

    In this paper, we will re-visit the Relevance Voxel Machine (RVoxM), a recently developed sparse Bayesian framework used for predicting biological markers, e.g., presence of disease, from high-dimensional image data, e.g., brain MRI volumes. The proposed improvement, called IRVoxM, mitigates the ...

  3. Sensor Data Air Pollution Prediction by Machine Learning Methods

    Czech Academy of Sciences Publication Activity Database

    Vidnerová, Petra; Neruda, Roman

    submitted 25. 1. (2018) ISSN 1530-437X R&D Projects: GA ČR GA15-18108S Grant - others:GA MŠk(CZ) LM2015042 Institutional support: RVO:67985807 Keywords : machine learning * sensors * air pollution * deep neural networks * regularization networks Subject RIV: IN - Informatics, Computer Science Impact factor: 2.512, year: 2016

  4. Classification of carcinogenic and mutagenic properties using machine learning method

    DEFF Research Database (Denmark)

    Moorthy, N. S.Hari Narayana; Kumar, Surendra; Poongavanam, Vasanthanathan

    2017-01-01

    An accurate calculation of carcinogenicity of chemicals became a serious challenge for the health assessment authority around the globe because of not only increased cost for experiments but also various ethical issues exist using animal models. In this study, we provide machine learning...

  5. A Sparse Dictionary Learning-Based Adaptive Patch Inpainting Method for Thick Clouds Removal from High-Spatial Resolution Remote Sensing Imagery.

    Science.gov (United States)

    Meng, Fan; Yang, Xiaomei; Zhou, Chenghu; Li, Zhi

    2017-09-15

    Cloud cover is inevitable in optical remote sensing (RS) imagery on account of the influence of observation conditions, which limits the availability of RS data. Therefore, it is of great significance to be able to reconstruct the cloud-contaminated ground information. This paper presents a sparse dictionary learning-based image inpainting method for adaptively recovering the missing information corrupted by thick clouds patch-by-patch. A feature dictionary was learned from exemplars in the cloud-free regions, which was later utilized to infer the missing patches via sparse representation. To maintain the coherence of structures, structure sparsity was brought in to encourage first filling-in of missing patches on image structures. The optimization model of patch inpainting was formulated under the adaptive neighborhood-consistency constraint, which was solved by a modified orthogonal matching pursuit (OMP) algorithm. In light of these ideas, the thick-cloud removal scheme was designed and applied to images with simulated and true clouds. Comparisons and experiments show that our method can not only keep structures and textures consistent with the surrounding ground information, but also yield rare smoothing effect and block effect, which is more suitable for the removal of clouds from high-spatial resolution RS imagery with salient structures and abundant textured features.

  6. Machine Learning

    Energy Technology Data Exchange (ETDEWEB)

    Chikkagoudar, Satish; Chatterjee, Samrat; Thomas, Dennis G.; Carroll, Thomas E.; Muller, George

    2017-04-21

    The absence of a robust and unified theory of cyber dynamics presents challenges and opportunities for using machine learning based data-driven approaches to further the understanding of the behavior of such complex systems. Analysts can also use machine learning approaches to gain operational insights. In order to be operationally beneficial, cybersecurity machine learning based models need to have the ability to: (1) represent a real-world system, (2) infer system properties, and (3) learn and adapt based on expert knowledge and observations. Probabilistic models and Probabilistic graphical models provide these necessary properties and are further explored in this chapter. Bayesian Networks and Hidden Markov Models are introduced as an example of a widely used data driven classification/modeling strategy.

  7. Different protein-protein interface patterns predicted by different machine learning methods.

    Science.gov (United States)

    Wang, Wei; Yang, Yongxiao; Yin, Jianxin; Gong, Xinqi

    2017-11-22

    Different types of protein-protein interactions make different protein-protein interface patterns. Different machine learning methods are suitable to deal with different types of data. Then, is it the same situation that different interface patterns are preferred for prediction by different machine learning methods? Here, four different machine learning methods were employed to predict protein-protein interface residue pairs on different interface patterns. The performances of the methods for different types of proteins are different, which suggest that different machine learning methods tend to predict different protein-protein interface patterns. We made use of ANOVA and variable selection to prove our result. Our proposed methods taking advantages of different single methods also got a good prediction result compared to single methods. In addition to the prediction of protein-protein interactions, this idea can be extended to other research areas such as protein structure prediction and design.

  8. Phase Modulation Method for Control Systems of Rotary Machine Parameters

    Directory of Open Access Journals (Sweden)

    V. V. Sychev

    2014-01-01

    Full Text Available Traditionally, vibration-based diagnostics takes the main place in a large complex of technical control means of rotary machine operation. It allows us to control the onset of extreme limit states of operating construction and its elements. However, vibration-based diagnostics is incapable to provide differentiated information about the condition of particular units, type of fault and point of its occurrence.From the practical experience of optoelectronic sensors development, methods of phase coding information about the behavior of the investigated object are known. They allow us to overcome the abovementioned disadvantage of vibration-based diagnostics through the modulation of the reflected radiation from the object. This phase modulation is performed with the image analyzers, in which the modulating raster (alternating transparent and nontransparent sectors is designed so, that the carrier frequency of oscillations is absent (suppressed in frequency spectrum, and all useful information can be found in the side frequencies.Carrier frequency suppression appears for two complete turns of the modulating raster. Each time during this process oscillations have a 180° phase shift (hop relatively to the initial oscillation on the boundary of each turn. It leads to a substantial increase in signal/noise ratio and possibility to conduct high-accuracy diagnostics.The principle of the pseudo inversion is used for measurements to suppress an adverse effect of various factors in dynamic control system. For this principle the leaving and returned beams practically go on the same way with small spatial shift. This shift occurs then the leaving beam reflects from a basic surface and the reflected – from the measured surface of the object. Therefore the measurements become insensitive to any other errors of system, except relative position of system «model-object».The main advantages of such measurements are the following:- system steadiness to error

  9. Machine learning methods in predicting the student academic motivation

    Directory of Open Access Journals (Sweden)

    Ivana Đurđević Babić

    2017-01-01

    Full Text Available Academic motivation is closely related to academic performance. For educators, it is equally important to detect early students with a lack of academic motivation as it is to detect those with a high level of academic motivation. In endeavouring to develop a classification model for predicting student academic motivation based on their behaviour in learning management system (LMS courses, this paper intends to establish links between the predicted student academic motivation and their behaviour in the LMS course. Students from all years at the Faculty of Education in Osijek participated in this research. Three machine learning classifiers (neural networks, decision trees, and support vector machines were used. To establish whether a significant difference in the performance of models exists, a t-test of the difference in proportions was used. Although, all classifiers were successful, the neural network model was shown to be the most successful in detecting the student academic motivation based on their behaviour in LMS course.

  10. Survey of Machine Learning Methods for Database Security

    Science.gov (United States)

    Kamra, Ashish; Ber, Elisa

    Application of machine learning techniques to database security is an emerging area of research. In this chapter, we present a survey of various approaches that use machine learning/data mining techniques to enhance the traditional security mechanisms of databases. There are two key database security areas in which these techniques have found applications, namely, detection of SQL Injection attacks and anomaly detection for defending against insider threats. Apart from the research prototypes and tools, various third-party commercial products are also available that provide database activity monitoring solutions by profiling database users and applications. We present a survey of such products. We end the chapter with a primer on mechanisms for responding to database anomalies.

  11. A method and machine for forming pleated and bellow tubes

    International Nuclear Information System (INIS)

    Banks, J.W.

    1975-01-01

    In a machine, the rollers outside the rough tube are rigidly supported for assuring the accurate forming of each turn of the pleated tube, the latter being position-indexed independently of the already formed turns. An inner roller is supported by a device for adjusting and indexing the position thereof on a carriage. The thus obtained tubes are suitable, in particular, for forming expansion sealing joints for power generators or nuclear reactors [fr

  12. Comparative analysis of machine learning methods in ligand-based virtual screening of large compound libraries.

    Science.gov (United States)

    Ma, Xiao H; Jia, Jia; Zhu, Feng; Xue, Ying; Li, Ze R; Chen, Yu Z

    2009-05-01

    Machine learning methods have been explored as ligand-based virtual screening tools for facilitating drug lead discovery. These methods predict compounds of specific pharmacodynamic, pharmacokinetic or toxicological properties based on their structure-derived structural and physicochemical properties. Increasing attention has been directed at these methods because of their capability in predicting compounds of diverse structures and complex structure-activity relationships without requiring the knowledge of target 3D structure. This article reviews current progresses in using machine learning methods for virtual screening of pharmacodynamically active compounds from large compound libraries, and analyzes and compares the reported performances of machine learning tools with those of structure-based and other ligand-based (such as pharmacophore and clustering) virtual screening methods. The feasibility to improve the performance of machine learning methods in screening large libraries is discussed.

  13. Machine Learning Methods for Analysis of Metabolic Data and Metabolic Pathway Modeling.

    Science.gov (United States)

    Cuperlovic-Culf, Miroslava

    2018-01-11

    Machine learning uses experimental data to optimize clustering or classification of samples or features, or to develop, augment or verify models that can be used to predict behavior or properties of systems. It is expected that machine learning will help provide actionable knowledge from a variety of big data including metabolomics data, as well as results of metabolism models. A variety of machine learning methods has been applied in bioinformatics and metabolism analyses including self-organizing maps, support vector machines, the kernel machine, Bayesian networks or fuzzy logic. To a lesser extent, machine learning has also been utilized to take advantage of the increasing availability of genomics and metabolomics data for the optimization of metabolic network models and their analysis. In this context, machine learning has aided the development of metabolic networks, the calculation of parameters for stoichiometric and kinetic models, as well as the analysis of major features in the model for the optimal application of bioreactors. Examples of this very interesting, albeit highly complex, application of machine learning for metabolism modeling will be the primary focus of this review presenting several different types of applications for model optimization, parameter determination or system analysis using models, as well as the utilization of several different types of machine learning technologies.

  14. Machine Learning Methods for Analysis of Metabolic Data and Metabolic Pathway Modeling

    Science.gov (United States)

    Cuperlovic-Culf, Miroslava

    2018-01-01

    Machine learning uses experimental data to optimize clustering or classification of samples or features, or to develop, augment or verify models that can be used to predict behavior or properties of systems. It is expected that machine learning will help provide actionable knowledge from a variety of big data including metabolomics data, as well as results of metabolism models. A variety of machine learning methods has been applied in bioinformatics and metabolism analyses including self-organizing maps, support vector machines, the kernel machine, Bayesian networks or fuzzy logic. To a lesser extent, machine learning has also been utilized to take advantage of the increasing availability of genomics and metabolomics data for the optimization of metabolic network models and their analysis. In this context, machine learning has aided the development of metabolic networks, the calculation of parameters for stoichiometric and kinetic models, as well as the analysis of major features in the model for the optimal application of bioreactors. Examples of this very interesting, albeit highly complex, application of machine learning for metabolism modeling will be the primary focus of this review presenting several different types of applications for model optimization, parameter determination or system analysis using models, as well as the utilization of several different types of machine learning technologies. PMID:29324649

  15. Building Customer Churn Prediction Models in Fitness Industry with Machine Learning Methods

    OpenAIRE

    Shan, Min

    2017-01-01

    With the rapid growth of digital systems, churn management has become a major focus within customer relationship management in many industries. Ample research has been conducted for churn prediction in different industries with various machine learning methods. This thesis aims to combine feature selection and supervised machine learning methods for defining models of churn prediction and apply them on fitness industry. Forward selection is chosen as feature selection methods. Support Vector ...

  16. Machine Learning Methods for Identifying Composition of Uranium Deposits in Kazakhstan

    Directory of Open Access Journals (Sweden)

    Kuchin Yan

    2017-12-01

    Full Text Available The paper explores geophysical methods of wells survey, as well as their role in the development of Kazakhstan’s uranium deposit mining efforts. An analysis of the existing methods for solving the problem of interpreting geophysical data using machine learning in petroleum geophysics is made. The requirements and possible applications of machine learning methods in regard to uranium deposits of Kazakhstan are formulated in the paper.

  17. Research on intelligent machine self-perception method based on LSTM

    Science.gov (United States)

    Wang, Qiang; Cheng, Tao

    2018-05-01

    In this paper, we use the advantages of LSTM in feature extraction and processing high-dimensional and complex nonlinear data, and apply it to the autonomous perception of intelligent machines. Compared with the traditional multi-layer neural network, this model has memory, can handle time series information of any length. Since the multi-physical domain signals of processing machines have a certain timing relationship, and there is a contextual relationship between states and states, using this deep learning method to realize the self-perception of intelligent processing machines has strong versatility and adaptability. The experiment results show that the method proposed in this paper can obviously improve the sensing accuracy under various working conditions of the intelligent machine, and also shows that the algorithm can well support the intelligent processing machine to realize self-perception.

  18. Designing Focused Chemical Libraries Enriched in Protein-Protein Interaction Inhibitors using Machine-Learning Methods

    Science.gov (United States)

    Reynès, Christelle; Host, Hélène; Camproux, Anne-Claude; Laconde, Guillaume; Leroux, Florence; Mazars, Anne; Deprez, Benoit; Fahraeus, Robin; Villoutreix, Bruno O.; Sperandio, Olivier

    2010-01-01

    Protein-protein interactions (PPIs) may represent one of the next major classes of therapeutic targets. So far, only a minute fraction of the estimated 650,000 PPIs that comprise the human interactome are known with a tiny number of complexes being drugged. Such intricate biological systems cannot be cost-efficiently tackled using conventional high-throughput screening methods. Rather, time has come for designing new strategies that will maximize the chance for hit identification through a rationalization of the PPI inhibitor chemical space and the design of PPI-focused compound libraries (global or target-specific). Here, we train machine-learning-based models, mainly decision trees, using a dataset of known PPI inhibitors and of regular drugs in order to determine a global physico-chemical profile for putative PPI inhibitors. This statistical analysis unravels two important molecular descriptors for PPI inhibitors characterizing specific molecular shapes and the presence of a privileged number of aromatic bonds. The best model has been transposed into a computer program, PPI-HitProfiler, that can output from any drug-like compound collection a focused chemical library enriched in putative PPI inhibitors. Our PPI inhibitor profiler is challenged on the experimental screening results of 11 different PPIs among which the p53/MDM2 interaction screened within our own CDithem platform, that in addition to the validation of our concept led to the identification of 4 novel p53/MDM2 inhibitors. Collectively, our tool shows a robust behavior on the 11 experimental datasets by correctly profiling 70% of the experimentally identified hits while removing 52% of the inactive compounds from the initial compound collections. We strongly believe that this new tool can be used as a global PPI inhibitor profiler prior to screening assays to reduce the size of the compound collections to be experimentally screened while keeping most of the true PPI inhibitors. PPI-HitProfiler is

  19. Designing focused chemical libraries enriched in protein-protein interaction inhibitors using machine-learning methods.

    Directory of Open Access Journals (Sweden)

    Christelle Reynès

    2010-03-01

    Full Text Available Protein-protein interactions (PPIs may represent one of the next major classes of therapeutic targets. So far, only a minute fraction of the estimated 650,000 PPIs that comprise the human interactome are known with a tiny number of complexes being drugged. Such intricate biological systems cannot be cost-efficiently tackled using conventional high-throughput screening methods. Rather, time has come for designing new strategies that will maximize the chance for hit identification through a rationalization of the PPI inhibitor chemical space and the design of PPI-focused compound libraries (global or target-specific. Here, we train machine-learning-based models, mainly decision trees, using a dataset of known PPI inhibitors and of regular drugs in order to determine a global physico-chemical profile for putative PPI inhibitors. This statistical analysis unravels two important molecular descriptors for PPI inhibitors characterizing specific molecular shapes and the presence of a privileged number of aromatic bonds. The best model has been transposed into a computer program, PPI-HitProfiler, that can output from any drug-like compound collection a focused chemical library enriched in putative PPI inhibitors. Our PPI inhibitor profiler is challenged on the experimental screening results of 11 different PPIs among which the p53/MDM2 interaction screened within our own CDithem platform, that in addition to the validation of our concept led to the identification of 4 novel p53/MDM2 inhibitors. Collectively, our tool shows a robust behavior on the 11 experimental datasets by correctly profiling 70% of the experimentally identified hits while removing 52% of the inactive compounds from the initial compound collections. We strongly believe that this new tool can be used as a global PPI inhibitor profiler prior to screening assays to reduce the size of the compound collections to be experimentally screened while keeping most of the true PPI inhibitors. PPI

  20. Designing focused chemical libraries enriched in protein-protein interaction inhibitors using machine-learning methods.

    Science.gov (United States)

    Reynès, Christelle; Host, Hélène; Camproux, Anne-Claude; Laconde, Guillaume; Leroux, Florence; Mazars, Anne; Deprez, Benoit; Fahraeus, Robin; Villoutreix, Bruno O; Sperandio, Olivier

    2010-03-05

    Protein-protein interactions (PPIs) may represent one of the next major classes of therapeutic targets. So far, only a minute fraction of the estimated 650,000 PPIs that comprise the human interactome are known with a tiny number of complexes being drugged. Such intricate biological systems cannot be cost-efficiently tackled using conventional high-throughput screening methods. Rather, time has come for designing new strategies that will maximize the chance for hit identification through a rationalization of the PPI inhibitor chemical space and the design of PPI-focused compound libraries (global or target-specific). Here, we train machine-learning-based models, mainly decision trees, using a dataset of known PPI inhibitors and of regular drugs in order to determine a global physico-chemical profile for putative PPI inhibitors. This statistical analysis unravels two important molecular descriptors for PPI inhibitors characterizing specific molecular shapes and the presence of a privileged number of aromatic bonds. The best model has been transposed into a computer program, PPI-HitProfiler, that can output from any drug-like compound collection a focused chemical library enriched in putative PPI inhibitors. Our PPI inhibitor profiler is challenged on the experimental screening results of 11 different PPIs among which the p53/MDM2 interaction screened within our own CDithem platform, that in addition to the validation of our concept led to the identification of 4 novel p53/MDM2 inhibitors. Collectively, our tool shows a robust behavior on the 11 experimental datasets by correctly profiling 70% of the experimentally identified hits while removing 52% of the inactive compounds from the initial compound collections. We strongly believe that this new tool can be used as a global PPI inhibitor profiler prior to screening assays to reduce the size of the compound collections to be experimentally screened while keeping most of the true PPI inhibitors. PPI-HitProfiler is

  1. Chatter suppression methods of a robot machine for ITER vacuum vessel assembly and maintenance

    International Nuclear Information System (INIS)

    Wu, Huapeng; Wang, Yongbo; Li, Ming; Al-Saedi, Mazin; Handroos, Heikki

    2014-01-01

    Highlights: •A redundant 10-DOF serial-parallel hybrid robot for ITER assembly and maintains is presented. •A dynamic model of the robot is developed. •A feedback and feedforward controller is presented to suppress machining vibration of the robot. -- Abstract: In the process of assembly and maintenance of ITER vacuum vessel (ITER VV), various machining tasks including threading, milling, welding-defects cutting and flexible hose boring are required to be performed from inside of ITER VV by on-site machining tools. Robot machine is a promising option for these tasks, but great chatter (machine vibration) would happen in the machining process. The chatter vibration will deteriorate the robot accuracy and surface quality, and even cause some damages on the end-effector tools and the robot structure itself. This paper introduces two vibration control methods, one is passive and another is active vibration control. For the passive vibration control, a parallel mechanism is presented to increase the stiffness of robot machine; for the active vibration control, a hybrid control method combining feedforward controller and nonlinear feedback controller is introduced for chatter suppression. A dynamic model and its chatter vibration phenomena of a hybrid robot is demonstrated. Simulation results are given based on the proposed hybrid robot machine which is developed for the ITER VV assembly and maintenance

  2. Chatter suppression methods of a robot machine for ITER vacuum vessel assembly and maintenance

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Huapeng; Wang, Yongbo, E-mail: yongbo.wang@lut.fi; Li, Ming; Al-Saedi, Mazin; Handroos, Heikki

    2014-10-15

    Highlights: •A redundant 10-DOF serial-parallel hybrid robot for ITER assembly and maintains is presented. •A dynamic model of the robot is developed. •A feedback and feedforward controller is presented to suppress machining vibration of the robot. -- Abstract: In the process of assembly and maintenance of ITER vacuum vessel (ITER VV), various machining tasks including threading, milling, welding-defects cutting and flexible hose boring are required to be performed from inside of ITER VV by on-site machining tools. Robot machine is a promising option for these tasks, but great chatter (machine vibration) would happen in the machining process. The chatter vibration will deteriorate the robot accuracy and surface quality, and even cause some damages on the end-effector tools and the robot structure itself. This paper introduces two vibration control methods, one is passive and another is active vibration control. For the passive vibration control, a parallel mechanism is presented to increase the stiffness of robot machine; for the active vibration control, a hybrid control method combining feedforward controller and nonlinear feedback controller is introduced for chatter suppression. A dynamic model and its chatter vibration phenomena of a hybrid robot is demonstrated. Simulation results are given based on the proposed hybrid robot machine which is developed for the ITER VV assembly and maintenance.

  3. Machine Selection in A Dairy Product Company with Entropy and SAW Method Integration

    Directory of Open Access Journals (Sweden)

    Aşkın Özdağoğlu

    2017-07-01

    Full Text Available Machine selection is an important and difficult process for the firms, and its results may generate more problems than anticipated. In order to find the best alternative, managers should define the requirements of the factory and determine the necessary criteria. On the other hand, the decision making criteria in order to choose the right equipment may vary according to the type of the manufacturing facility, market requirements, and consumer assigned criteria. This study aims to find the best machine alternative  among  the three machine offerings according to twelve evaluation criteria by integrating entropy method with SAW method.

  4. Machine Learning Method Applied in Readout System of Superheated Droplet Detector

    Science.gov (United States)

    Liu, Yi; Sullivan, Clair Julia; d'Errico, Francesco

    2017-07-01

    Direct readability is one advantage of superheated droplet detectors in neutron dosimetry. Utilizing such a distinct characteristic, an imaging readout system analyzes image of the detector for neutron dose readout. To improve the accuracy and precision of algorithms in the imaging readout system, machine learning algorithms were developed. Deep learning neural network and support vector machine algorithms are applied and compared with generally used Hough transform and curvature analysis methods. The machine learning methods showed a much higher accuracy and better precision in recognizing circular gas bubbles.

  5. Quantitative Evaluation of Heavy Duty Machine Tools Remanufacturing Based on Modified Catastrophe Progression Method

    Science.gov (United States)

    shunhe, Li; jianhua, Rao; lin, Gui; weimin, Zhang; degang, Liu

    2017-11-01

    The result of remanufacturing evaluation is the basis for judging whether the heavy duty machine tool can remanufacture in the EOL stage of the machine tool lifecycle management.The objectivity and accuracy of evaluation is the key to the evaluation method.In this paper, the catastrophe progression method is introduced into the quantitative evaluation of heavy duty machine tools’ remanufacturing,and the results are modified by the comprehensive adjustment method,which makes the evaluation results accord with the standard of human conventional thinking.Using the catastrophe progression method to establish the heavy duty machine tools’ quantitative evaluation model,to evaluate the retired TK6916 type CNC floor milling-boring machine’s remanufacturing.The evaluation process is simple,high quantification,the result is objective.

  6. Method of Relative Magnitudes for Calculating Magnetic Fluxes in Electrical Machine

    Directory of Open Access Journals (Sweden)

    Oleg A.

    2018-03-01

    Full Text Available Introduction: The article presents the study results of the model of an asynchronous electric motor carried out by the author within the framework of the Priorities Research Program “Research and development in the priority areas of development of Russia’s scientific and technical complex for 2014–2020”. Materials and Methods: A model of an idealized asynchronous machine (with sinusoidal distribution of magnetic induction in air gap is used in vector control systems. It is impossible to create windings for this machine. The basis of the new calculation approach was the Conductivity of Teeth Contours Method, developed at the Electrical Machines Chair of the Moscow Power Engineering Institute (MPEI. Unlike this method, the author used not absolute values, but relative magnitudes of magnetic fluxes. This solution fundamentally improved the method’s capabilities. The relative magnitudes of the magnetic fluxes of the teeth contours do not required the additional consideration for exact structure of magnetic field of tooth and adjacent slots. These structures are identical for all the teeth of the machine and differ only in magnitude. The purpose of the calculations was not traditional harmonic analysis of magnetic induction distribution in air gap of machine, but a refinement of the equations of electric machine model. The vector control researchers used only the cos(θ function as a value of mutual magnetic coupling coefficient between the windings. Results: The author has developed a way to take into account the design of the windings of a real machine by using imaginary measuring winding with the same winding design as a real phase winding. The imaginary winding can be placed in the position of any machine windings. The calculation of the relative magnetic fluxes of this winding helped to estimate the real values of the magnetic coupling coefficients between the windings, and find the correction functions for the model of an idealized

  7. Failure analysis for ultrasound machines in a radiology department after implementation of predictive maintenance method

    Directory of Open Access Journals (Sweden)

    Greg Chu

    2018-01-01

    Full Text Available Objective: The objective of the study was to perform quantitative failure and fault analysis to the diagnostic ultrasound (US scanners in a radiology department after the implementation of the predictive maintenance (PdM method; to study the reduction trend of machine failure; to understand machine operating parameters affecting the failure; to further optimize the method to maximize the machine clinically service time. Materials and Methods: The PdM method has been implemented to the 5 US machines since 2013. Log books were used to record machine failures and their root causes together with the time spent on repair, all of which were retrieved, categorized, and analyzed for the period between 2013 and 2016. Results: There were a total of 108 cases of failure occurred in these 5 US machines during the 4-year study period. The average number of failure per month for all these machines was 2.4. Failure analysis showed that there were 33 cases (30.5% due to software, 44 cases (40.7% due to hardware, and 31 cases (28.7% due to US probe. There was a statistically significant negative correlation between the time spent on regular quality assurance (QA by hospital physicists with the time spent on faulty parts replacement over the study period (P = 0.007. However, there was no statistically significant correlation between regular QA time and total yearly breakdown case (P = 0.12, although there has been a decreasing trend observed in the yearly total breakdown. Conclusion: There has been a significant improvement on the machine failure of US machines attributed to the concerted effort of sonographers and physicists in our department to practice the PdM method, in that system component repair time has been reduced, and a decreasing trend in the number of system breakdown has been observed.

  8. A Review for Detecting Gene-Gene Interactions Using Machine Learning Methods in Genetic Epidemiology

    Directory of Open Access Journals (Sweden)

    Ching Lee Koo

    2013-01-01

    Full Text Available Recently, the greatest statistical computational challenge in genetic epidemiology is to identify and characterize the genes that interact with other genes and environment factors that bring the effect on complex multifactorial disease. These gene-gene interactions are also denoted as epitasis in which this phenomenon cannot be solved by traditional statistical method due to the high dimensionality of the data and the occurrence of multiple polymorphism. Hence, there are several machine learning methods to solve such problems by identifying such susceptibility gene which are neural networks (NNs, support vector machine (SVM, and random forests (RFs in such common and multifactorial disease. This paper gives an overview on machine learning methods, describing the methodology of each machine learning methods and its application in detecting gene-gene and gene-environment interactions. Lastly, this paper discussed each machine learning method and presents the strengths and weaknesses of each machine learning method in detecting gene-gene interactions in complex human disease.

  9. Machine learning for medical ultrasound: status, methods, and future opportunities.

    Science.gov (United States)

    Brattain, Laura J; Telfer, Brian A; Dhyani, Manish; Grajo, Joseph R; Samir, Anthony E

    2018-04-01

    Ultrasound (US) imaging is the most commonly performed cross-sectional diagnostic imaging modality in the practice of medicine. It is low-cost, non-ionizing, portable, and capable of real-time image acquisition and display. US is a rapidly evolving technology with significant challenges and opportunities. Challenges include high inter- and intra-operator variability and limited image quality control. Tremendous opportunities have arisen in the last decade as a result of exponential growth in available computational power coupled with progressive miniaturization of US devices. As US devices become smaller, enhanced computational capability can contribute significantly to decreasing variability through advanced image processing. In this paper, we review leading machine learning (ML) approaches and research directions in US, with an emphasis on recent ML advances. We also present our outlook on future opportunities for ML techniques to further improve clinical workflow and US-based disease diagnosis and characterization.

  10. A Modified Method Combined with a Support Vector Machine and Bayesian Algorithms in Biological Information

    Directory of Open Access Journals (Sweden)

    Wen-Gang Zhou

    2015-06-01

    Full Text Available With the deep research of genomics and proteomics, the number of new protein sequences has expanded rapidly. With the obvious shortcomings of high cost and low efficiency of the traditional experimental method, the calculation method for protein localization prediction has attracted a lot of attention due to its convenience and low cost. In the machine learning techniques, neural network and support vector machine (SVM are often used as learning tools. Due to its complete theoretical framework, SVM has been widely applied. In this paper, we make an improvement on the existing machine learning algorithm of the support vector machine algorithm, and a new improved algorithm has been developed, combined with Bayesian algorithms. The proposed algorithm can improve calculation efficiency, and defects of the original algorithm are eliminated. According to the verification, the method has proved to be valid. At the same time, it can reduce calculation time and improve prediction efficiency.

  11. A modeling method for hybrid energy behaviors in flexible machining systems

    International Nuclear Information System (INIS)

    Li, Yufeng; He, Yan; Wang, Yan; Wang, Yulin; Yan, Ping; Lin, Shenlong

    2015-01-01

    Increasingly environmental and economic pressures have led to great concerns regarding the energy consumption of machining systems. Understanding energy behaviors of flexible machining systems is a prerequisite for improving energy efficiency of these systems. This paper proposes a modeling method to predict energy behaviors in flexible machining systems. The hybrid energy behaviors not only depend on the technical specification related of machine tools and workpieces, but are significantly affected by individual production scenarios. In the method, hybrid energy behaviors are decomposed into Structure-related energy behaviors, State-related energy behaviors, Process-related energy behaviors and Assignment-related energy behaviors. The modeling method for the hybrid energy behaviors is proposed based on Colored Timed Object-oriented Petri Net (CTOPN). The former two types of energy behaviors are modeled by constructing the structure of CTOPN, whist the latter two types of behaviors are simulated by applying colored tokens and associated attributes. Machining on two workpieces in the experimental workshop were undertaken to verify the proposed modeling method. The results showed that the method can provide multi-perspective transparency on energy consumption related to machine tools, workpieces as well as production management, and is particularly suitable for flexible manufacturing system when frequent changes in machining systems are often encountered. - Highlights: • Energy behaviors in flexible machining systems are modeled in this paper. • Hybrid characteristics of energy behaviors are examined from multiple viewpoints. • Flexible modeling method CTOPN is used to predict the hybrid energy behaviors. • This work offers a multi-perspective transparency on energy consumption

  12. Comparing of cogging torque reduction methods in permanent magnet machines with fractional slot windings

    Science.gov (United States)

    Pristup, A. G.; Toporkov, D. M.

    2017-10-01

    The results of the investigation of the cogging torque in permanent magnet synchronous machines, which is caused by the stator slotting and the rotor eccentricity, are presented in the paper. A new design of the machine has been developed in the course of the investigation, and the value of the cogging torque in this construction is less considerably compared to other constructions. In contrast to the available methods of the cogging torque reduction, the solution suggested not only decreases the level of the cogging torque but also has negligibly small influence on characteristics of the machine with the rotor eccentricity which is typical of the mass production and long-term usage.

  13. Research progress in machine learning methods for gene-gene interaction detection.

    Science.gov (United States)

    Peng, Zhe-Ye; Tang, Zi-Jun; Xie, Min-Zhu

    2018-03-20

    Complex diseases are results of gene-gene and gene-environment interactions. However, the detection of high-dimensional gene-gene interactions is computationally challenging. In the last two decades, machine-learning approaches have been developed to detect gene-gene interactions with some successes. In this review, we summarize the progress in research on machine learning methods, as applied to gene-gene interaction detection. It systematically examines the principles and limitations of the current machine learning methods used in genome wide association studies (GWAS) to detect gene-gene interactions, such as neural networks (NN), random forest (RF), support vector machines (SVM) and multifactor dimensionality reduction (MDR), and provides some insights on the future research directions in the field.

  14. Floor-Fractured Craters through Machine Learning Methods

    Science.gov (United States)

    Thorey, C.

    2015-12-01

    Floor-fractured craters are impact craters that have undergone post impact deformations. They are characterized by shallow floors with a plate-like or convex appearance, wide floor moats, and radial, concentric, and polygonal floor-fractures. While the origin of these deformations has long been debated, it is now generally accepted that they are the result of the emplacement of shallow magmatic intrusions below their floor. These craters thus constitute an efficient tool to probe the importance of intrusive magmatism from the lunar surface. The most recent catalog of lunar-floor fractured craters references about 200 of them, mainly located around the lunar maria Herein, we will discuss the possibility of using machine learning algorithms to try to detect new floor-fractured craters on the Moon among the 60000 craters referenced in the most recent catalogs. In particular, we will use the gravity field provided by the Gravity Recovery and Interior Laboratory (GRAIL) mission, and the topographic dataset obtained from the Lunar Orbiter Laser Altimeter (LOLA) instrument to design a set of representative features for each crater. We will then discuss the possibility to design a binary supervised classifier, based on these features, to discriminate between the presence or absence of crater-centered intrusion below a specific crater. First predictions from different classifier in terms of their accuracy and uncertainty will be presented.

  15. Multi-method automated diagnostics of rotating machines

    Science.gov (United States)

    Kostyukov, A. V.; Boychenko, S. N.; Shchelkanov, A. V.; Burda, E. A.

    2017-08-01

    The automated machinery diagnostics and monitoring systems utilized within the petrochemical plants are an integral part of the measures taken to ensure safety and, as a consequence, the efficiency of these industrial facilities. Such systems are often limited in their functionality due to the specifics of the diagnostic techniques adopted. As the diagnostic techniques applied in each system are limited, and machinery defects can have different physical nature, it becomes necessary to combine several diagnostics and monitoring systems to control various machinery components. Such an approach is inconvenient, since it requires additional measures to bring the diagnostic results in a single view of the technical condition of production assets. In this case, we mean by a production facility a bonded complex of a process unit, a drive, a power source and lines. A failure of any of these components will cause an outage of the production asset, which is unacceptable. The purpose of the study is to test a combined use of vibration diagnostics and partial discharge techniques within the diagnostic systems of enterprises for automated control of the technical condition of rotating machinery during maintenance and at production facilities. The described solutions allow you to control the condition of mechanical and electrical components of rotating machines. It is shown that the functionality of the diagnostics systems can be expanded with minimal changes in technological chains of repair and operation of rotating machinery. Automation of such systems reduces the influence of the human factor on the quality of repair and diagnostics of the machinery.

  16. Method and apparatus for improving the quality and efficiency of ultrashort-pulse laser machining

    Science.gov (United States)

    Stuart, Brent C.; Nguyen, Hoang T.; Perry, Michael D.

    2001-01-01

    A method and apparatus for improving the quality and efficiency of machining of materials with laser pulse durations shorter than 100 picoseconds by orienting and maintaining the polarization of the laser light such that the electric field vector is perpendicular relative to the edges of the material being processed. Its use is any machining operation requiring remote delivery and/or high precision with minimal collateral dames.

  17. Vibration Prediction Method of Electric Machines by using Experimental Transfer Function and Magnetostatic Finite Element Analysis

    International Nuclear Information System (INIS)

    Saito, A; Kuroishi, M; Nakai, H

    2016-01-01

    This paper concerns the noise and structural vibration caused by rotating electric machines. Special attention is given to the magnetic-force induced vibration response of interior-permanent magnet machines. In general, to accurately predict and control the vibration response caused by the electric machines, it is inevitable to model not only the magnetic force induced by the fluctuation of magnetic fields, but also the structural dynamic characteristics of the electric machines and surrounding structural components. However, due to complicated boundary conditions and material properties of the components, such as laminated magnetic cores and varnished windings, it has been a challenge to compute accurate vibration response caused by the electric machines even after their physical models are available. In this paper, we propose a highly-accurate vibration prediction method that couples experimentally-obtained discrete structural transfer functions and numerically-obtained distributed magnetic-forces. The proposed vibration synthesis methodology has been applied to predict vibration responses of an interior permanent magnet machine. The results show that the predicted vibration response of the electric machine agrees very well with the measured vibration response for several load conditions, for wide frequency ranges. (paper)

  18. A human-machine cooperation route planning method based on improved A* algorithm

    Science.gov (United States)

    Zhang, Zhengsheng; Cai, Chao

    2011-12-01

    To avoid the limitation of common route planning method to blindly pursue higher Machine Intelligence and autoimmunization, this paper presents a human-machine cooperation route planning method. The proposed method includes a new A* path searing strategy based on dynamic heuristic searching and a human cooperated decision strategy to prune searching area. It can overcome the shortage of A* algorithm to fall into a local long term searching. Experiments showed that this method can quickly plan a feasible route to meet the macro-policy thinking.

  19. Performance of machine learning methods for ligand-based virtual screening.

    Science.gov (United States)

    Plewczynski, Dariusz; Spieser, Stéphane A H; Koch, Uwe

    2009-05-01

    Computational screening of compound databases has become increasingly popular in pharmaceutical research. This review focuses on the evaluation of ligand-based virtual screening using active compounds as templates in the context of drug discovery. Ligand-based screening techniques are based on comparative molecular similarity analysis of compounds with known and unknown activity. We provide an overview of publications that have evaluated different machine learning methods, such as support vector machines, decision trees, ensemble methods such as boosting, bagging and random forests, clustering methods, neuronal networks, naïve Bayesian, data fusion methods and others.

  20. Predicting Coronal Mass Ejections Using Machine Learning Methods

    Science.gov (United States)

    Bobra, M. G.; Ilonidis, S.

    2016-04-01

    Of all the activity observed on the Sun, two of the most energetic events are flares and coronal mass ejections (CMEs). Usually, solar active regions that produce large flares will also produce a CME, but this is not always true. Despite advances in numerical modeling, it is still unclear which circumstances will produce a CME. Therefore, it is worthwhile to empirically determine which features distinguish flares associated with CMEs from flares that are not. At this time, no extensive study has used physically meaningful features of active regions to distinguish between these two populations. As such, we attempt to do so by using features derived from (1) photospheric vector magnetic field data taken by the Solar Dynamics Observatory’s Helioseismic and Magnetic Imager instrument and (2) X-ray flux data from the Geostationary Operational Environmental Satellite’s X-ray Flux instrument. We build a catalog of active regions that either produced both a flare and a CME (the positive class) or simply a flare (the negative class). We then use machine-learning algorithms to (1) determine which features distinguish these two populations, and (2) forecast whether an active region that produces an M- or X-class flare will also produce a CME. We compute the True Skill Statistic, a forecast verification metric, and find that it is a relatively high value of ∼0.8 ± 0.2. We conclude that a combination of six parameters, which are all intensive in nature, will capture most of the relevant information contained in the photospheric magnetic field.

  1. PREDICTING CORONAL MASS EJECTIONS USING MACHINE LEARNING METHODS

    Energy Technology Data Exchange (ETDEWEB)

    Bobra, M. G.; Ilonidis, S. [W.W. Hansen Experimental Physics Laboratory, Stanford University, Stanford, CA 94305 (United States)

    2016-04-20

    Of all the activity observed on the Sun, two of the most energetic events are flares and coronal mass ejections (CMEs). Usually, solar active regions that produce large flares will also produce a CME, but this is not always true. Despite advances in numerical modeling, it is still unclear which circumstances will produce a CME. Therefore, it is worthwhile to empirically determine which features distinguish flares associated with CMEs from flares that are not. At this time, no extensive study has used physically meaningful features of active regions to distinguish between these two populations. As such, we attempt to do so by using features derived from (1) photospheric vector magnetic field data taken by the Solar Dynamics Observatory ’s Helioseismic and Magnetic Imager instrument and (2) X-ray flux data from the Geostationary Operational Environmental Satellite’s X-ray Flux instrument. We build a catalog of active regions that either produced both a flare and a CME (the positive class) or simply a flare (the negative class). We then use machine-learning algorithms to (1) determine which features distinguish these two populations, and (2) forecast whether an active region that produces an M- or X-class flare will also produce a CME. We compute the True Skill Statistic, a forecast verification metric, and find that it is a relatively high value of ∼0.8 ± 0.2. We conclude that a combination of six parameters, which are all intensive in nature, will capture most of the relevant information contained in the photospheric magnetic field.

  2. Machine Maintenance Scheduling with Reliability Engineering Method and Maintenance Value Stream Mapping

    Science.gov (United States)

    Sembiring, N.; Nasution, A. H.

    2018-02-01

    Corrective maintenance i.e replacing or repairing the machine component after machine break down always done in a manufacturing company. It causes the production process must be stopped. Production time will decrease due to the maintenance team must replace or repair the damage machine component. This paper proposes a preventive maintenance’s schedule for a critical component of a critical machine of an crude palm oil and kernel company due to increase maintenance efficiency. The Reliability Engineering & Maintenance Value Stream Mapping is used as a method and a tool to analize the reliability of the component and reduce the wastage in any process by segregating value added and non value added activities.

  3. Classification of older adults with/without a fall history using machine learning methods.

    Science.gov (United States)

    Lin Zhang; Ou Ma; Fabre, Jennifer M; Wood, Robert H; Garcia, Stephanie U; Ivey, Kayla M; McCann, Evan D

    2015-01-01

    Falling is a serious problem in an aged society such that assessment of the risk of falls for individuals is imperative for the research and practice of falls prevention. This paper introduces an application of several machine learning methods for training a classifier which is capable of classifying individual older adults into a high risk group and a low risk group (distinguished by whether or not the members of the group have a recent history of falls). Using a 3D motion capture system, significant gait features related to falls risk are extracted. By training these features, classification hypotheses are obtained based on machine learning techniques (K Nearest-neighbour, Naive Bayes, Logistic Regression, Neural Network, and Support Vector Machine). Training and test accuracies with sensitivity and specificity of each of these techniques are assessed. The feature adjustment and tuning of the machine learning algorithms are discussed. The outcome of the study will benefit the prediction and prevention of falls.

  4. Design Method for Fast Switching Seat Valves for Digital Displacement Machines

    DEFF Research Database (Denmark)

    Roemer, Daniel Beck; Johansen, Per; Pedersen, Henrik C.

    2014-01-01

    corresponding to the piston movement, which has been shown to facilitate superior part load efficiency combined with high bandwidth compared to traditional displacement machines. However, DD machines need fast switching on-off valves with low pressure loss for efficient operation, especially in fast rotating......Digital Displacement (DD) machines are upcoming technology where the displacement of each pressure chamber is controlled electronically by use of two fast switching seat valves. The effective displacement and operation type (pumping/motoring) may be controlled by manipulating the seat valves...... method for DD seat valves are presented, taking into account the significant aspects related to obtaining efficient DD valves with basis in a given DD machine specifications. The seat area is minimized and the stroke length is minimized to obtain fast switching times while considering the pressure loss...

  5. Assessing a Novel Method to Reduce Anesthesia Machine Contamination: A Prospective, Observational Trial

    Directory of Open Access Journals (Sweden)

    Chuck J. Biddle

    2018-01-01

    Full Text Available Background. Anesthesia machines are known reservoirs of bacterial species, potentially contributing to healthcare associated infections (HAIs. An inexpensive, disposable, nonpermeable, transparent anesthesia machine wrap (AMW may reduce microbial contamination of the anesthesia machine. This study quantified the density and diversity of bacterial species found on anesthesia machines after terminal cleaning and between cases during actual anesthesia care to assess the impact of the AMW. We hypothesized reduced bioburden with the use of the AMW. Methods. In a prospective, experimental research design, the AMW was used in 11 surgical cases (intervention group and not used in 11 control surgical cases. Cases were consecutively assigned to general surgical operating rooms. Seven frequently touched and difficult to disinfect “hot spots” were cultured on each machine preceding and following each case. The density and diversity of cultured colony forming units (CFUs between the covered and uncovered machines were compared using Wilcoxon signed-rank test and Student’s t-tests. Results. There was a statistically significant reduction in CFU density and diversity when the AMW was employed. Conclusion. The protective effect of the AMW during regular anesthetic care provides a reliable and low-cost method to minimize the transmission of pathogens across patients and potentially reduces HAIs.

  6. A Numerical Comparison of Rule Ensemble Methods and Support Vector Machines

    Energy Technology Data Exchange (ETDEWEB)

    Meza, Juan C.; Woods, Mark

    2009-12-18

    Machine or statistical learning is a growing field that encompasses many scientific problems including estimating parameters from data, identifying risk factors in health studies, image recognition, and finding clusters within datasets, to name just a few examples. Statistical learning can be described as 'learning from data' , with the goal of making a prediction of some outcome of interest. This prediction is usually made on the basis of a computer model that is built using data where the outcomes and a set of features have been previously matched. The computer model is called a learner, hence the name machine learning. In this paper, we present two such algorithms, a support vector machine method and a rule ensemble method. We compared their predictive power on three supernova type 1a data sets provided by the Nearby Supernova Factory and found that while both methods give accuracies of approximately 95%, the rule ensemble method gives much lower false negative rates.

  7. Peak Detection Method Evaluation for Ion Mobility Spectrometry by Using Machine Learning Approaches

    DEFF Research Database (Denmark)

    Hauschild, Anne-Christin; Kopczynski, Dominik; D'Addario, Marianna

    2013-01-01

    machine learning methods exist, an inevitable preprocessing step is reliable and robust peak detection without manual intervention. In this work we evaluate four state-of-the-art approaches for automated IMS-based peak detection: local maxima search, watershed transformation with IPHEx, region......-merging with VisualNow, and peak model estimation (PME).We manually generated Metabolites 2013, 3 278 a gold standard with the aid of a domain expert (manual) and compare the performance of the four peak calling methods with respect to two distinct criteria. We first utilize established machine learning methods...

  8. CNC LATHE MACHINE PRODUCING NC CODE BY USING DIALOG METHOD

    Directory of Open Access Journals (Sweden)

    Yakup TURGUT

    2004-03-01

    Full Text Available In this study, an NC code generation program utilising Dialog Method was developed for turning centres. Initially, CNC lathes turning methods and tool path development techniques were reviewed briefly. By using geometric definition methods, tool path was generated and CNC part program was developed for FANUC control unit. The developed program made CNC part program generation process easy. The program was developed using BASIC 6.0 programming language while the material and cutting tool database were and supported with the help of ACCESS 7.0.

  9. A Comparison of Machine Learning Methods in a High-Dimensional Classification Problem

    Directory of Open Access Journals (Sweden)

    Zekić-Sušac Marijana

    2014-09-01

    Full Text Available Background: Large-dimensional data modelling often relies on variable reduction methods in the pre-processing and in the post-processing stage. However, such a reduction usually provides less information and yields a lower accuracy of the model. Objectives: The aim of this paper is to assess the high-dimensional classification problem of recognizing entrepreneurial intentions of students by machine learning methods. Methods/Approach: Four methods were tested: artificial neural networks, CART classification trees, support vector machines, and k-nearest neighbour on the same dataset in order to compare their efficiency in the sense of classification accuracy. The performance of each method was compared on ten subsamples in a 10-fold cross-validation procedure in order to assess computing sensitivity and specificity of each model. Results: The artificial neural network model based on multilayer perceptron yielded a higher classification rate than the models produced by other methods. The pairwise t-test showed a statistical significance between the artificial neural network and the k-nearest neighbour model, while the difference among other methods was not statistically significant. Conclusions: Tested machine learning methods are able to learn fast and achieve high classification accuracy. However, further advancement can be assured by testing a few additional methodological refinements in machine learning methods.

  10. Method for assembling dynamoelectric machine end shield parts

    International Nuclear Information System (INIS)

    Thomson, J.M.

    1984-01-01

    Methods, apparatus, and systems are provided for automatically assembling end shield assemblies of subassemblies for electric motors. In a preferred form, a system and methods are provided that utilize a non-palletized, non-synchronous concept to convey end shields through a number of assembly stations. At process stations situated along a conveyor, operations are performed on components. One method includes controlling traffic of sub-assemblies by toggle type escapements. A stop or latch of unique design stops end shield components in midstream, and ''lifts'' of unique design disengage parts from the conveyor and also support such parts during various operations. Photo-optic devices and proximity and reed switch mechanisms are utilized for control purposes. The work stations involved in one system include a unique assembly and pressing station involving oil well covers; a unique feed wick seating system; a unique lubricant adding operation; and unique ''building block'' mechanisms and methods

  11. A human-machine interface evaluation method: A difficulty evaluation method in information searching (DEMIS)

    International Nuclear Information System (INIS)

    Ha, Jun Su; Seong, Poong Hyun

    2009-01-01

    A human-machine interface (HMI) evaluation method, which is named 'difficulty evaluation method in information searching (DEMIS)', is proposed and demonstrated with an experimental study. The DEMIS is based on a human performance model and two measures of attentional-resource effectiveness in monitoring and detection tasks in nuclear power plants (NPPs). Operator competence and HMI design are modeled to be most significant factors to human performance. One of the two effectiveness measures is fixation-to-importance ratio (FIR) which represents attentional resource (eye fixations) spent on an information source compared to importance of the information source. The other measure is selective attention effectiveness (SAE) which incorporates FIRs for all information sources. The underlying principle of the measures is that the information source should be selectively attended to according to its informational importance. In this study, poor performance in information searching tasks is modeled to be coupled with difficulties caused by poor mental models of operators or/and poor HMI design. Human performance in information searching tasks is evaluated by analyzing the FIR and the SAE. Operator mental models are evaluated by a questionnaire-based method. Then difficulties caused by a poor HMI design are evaluated by a focused interview based on the FIR evaluation and then root causes leading to poor performance are identified in a systematic way.

  12. Space cutter compensation method for five-axis nonuniform rational basis spline machining

    Directory of Open Access Journals (Sweden)

    Yanyu Ding

    2015-07-01

    Full Text Available In view of the good machining performance of traditional three-axis nonuniform rational basis spline interpolation and the space cutter compensation issue in multi-axis machining, this article presents a triple nonuniform rational basis spline five-axis interpolation method, which uses three nonuniform rational basis spline curves to describe cutter center location, cutter axis vector, and cutter contact point trajectory, respectively. The relative position of the cutter and workpiece is calculated under the workpiece coordinate system, and the cutter machining trajectory can be described precisely and smoothly using this method. The three nonuniform rational basis spline curves are transformed into a 12-dimentional Bézier curve to carry out discretization during the discrete process. With the cutter contact point trajectory as the precision control condition, the discretization is fast. As for different cutters and corners, the complete description method of space cutter compensation vector is presented in this article. Finally, the five-axis nonuniform rational basis spline machining method is further verified in a two-turntable five-axis machine.

  13. Method Of Wire Insertion For Electric Machine Stators

    Science.gov (United States)

    Brown, David L; Stabel, Gerald R; Lawrence, Robert Anthony

    2005-02-08

    A method of inserting coils in slots of a stator is provided. The method includes interleaving a first set of first phase windings and a first set of second phase windings on an insertion tool. The method also includes activating the insertion tool to radially insert the first set of first phase windings and the first set of second phase windings in the slots of the stator. In one embodiment, interleaving the first set of first phase windings and the first set of second phase windings on the insertion tool includes forming the first set of first phase windings in first phase openings defined in the insertion tool, and forming the first set of second phase windings in second phase openings defined in the insertion tool.

  14. How can machine-learning methods assist in virtual screening for hyperuricemia? A healthcare machine-learning approach.

    Science.gov (United States)

    Ichikawa, Daisuke; Saito, Toki; Ujita, Waka; Oyama, Hiroshi

    2016-12-01

    Our purpose was to develop a new machine-learning approach (a virtual health check-up) toward identification of those at high risk of hyperuricemia. Applying the system to general health check-ups is expected to reduce medical costs compared with administering an additional test. Data were collected during annual health check-ups performed in Japan between 2011 and 2013 (inclusive). We prepared training and test datasets from the health check-up data to build prediction models; these were composed of 43,524 and 17,789 persons, respectively. Gradient-boosting decision tree (GBDT), random forest (RF), and logistic regression (LR) approaches were trained using the training dataset and were then used to predict hyperuricemia in the test dataset. Undersampling was applied to build the prediction models to deal with the imbalanced class dataset. The results showed that the RF and GBDT approaches afforded the best performances in terms of sensitivity and specificity, respectively. The area under the curve (AUC) values of the models, which reflected the total discriminative ability of the classification, were 0.796 [95% confidence interval (CI): 0.766-0.825] for the GBDT, 0.784 [95% CI: 0.752-0.815] for the RF, and 0.785 [95% CI: 0.752-0.819] for the LR approaches. No significant differences were observed between pairs of each approach. Small changes occurred in the AUCs after applying undersampling to build the models. We developed a virtual health check-up that predicted the development of hyperuricemia using machine-learning methods. The GBDT, RF, and LR methods had similar predictive capability. Undersampling did not remarkably improve predictive power. Copyright © 2016 Elsevier Inc. All rights reserved.

  15. A REVIEW OF VIBRATION MACHINE DIAGNOSTICS BY USING ARTIFICIAL INTELLIGENCE METHODS

    Directory of Open Access Journals (Sweden)

    Grover Zurita

    2016-09-01

    Full Text Available In the industry, gears and rolling bearings failures are one of the foremost causes of breakdown in rotating machines, reducing availability time of the production and resulting in costly systems downtime. Therefore, there are growing demands for vibration condition based monitoring of gears and bearings, and any method in order to improve the effectiveness, reliability, and accuracy of the bearing faults diagnosis ought to be evaluated. In order to perform machine diagnosis efficiently, researchers have extensively investigated different advanced digital signal processing techniques and artificial intelligence methods to accurately extract fault characteristics from vibration signals. The main goal of this article is to present the state-of-the-art development in vibration analysis for machine diagnosis based on artificial intelligence methods.

  16. A Novel Cogging Torque Simulation Method for Permanent-Magnet Synchronous Machines

    Directory of Open Access Journals (Sweden)

    Chun-Yu Hsiao

    2011-12-01

    Full Text Available Cogging torque exists between rotor mounted permanent magnets and stator teeth due to magnetic attraction and this is an undesired phenomenon which produces output ripple, vibration and noise in machines. The purpose of this paper is to study the existence and effects of cogging torque, and to present a novel, rapid, half magnet pole pair technique for forecasting and evaluating cogging torque. The technique uses the finite element method as well as Matlab research and development oriented software tools to reduce numerous computing jobs and simulation time. An example of a rotor-skewed structure used to reduce cogging torque of permanent magnet synchronous machines is evaluated and compared with a conventional analysis method for the same motor to verify the effectiveness of the proposed approach. The novel method is proved valuable and suitable for large-capacity machine design.

  17. Assessing a Novel Method to Reduce Anesthesia Machine Contamination: A Prospective, Observational Trial.

    Science.gov (United States)

    Biddle, Chuck J; George-Gay, Beverly; Prasanna, Praveen; Hill, Emily M; Davis, Thomas C; Verhulst, Brad

    2018-01-01

    Anesthesia machines are known reservoirs of bacterial species, potentially contributing to healthcare associated infections (HAIs). An inexpensive, disposable, nonpermeable, transparent anesthesia machine wrap (AMW) may reduce microbial contamination of the anesthesia machine. This study quantified the density and diversity of bacterial species found on anesthesia machines after terminal cleaning and between cases during actual anesthesia care to assess the impact of the AMW. We hypothesized reduced bioburden with the use of the AMW. In a prospective, experimental research design, the AMW was used in 11 surgical cases (intervention group) and not used in 11 control surgical cases. Cases were consecutively assigned to general surgical operating rooms. Seven frequently touched and difficult to disinfect "hot spots" were cultured on each machine preceding and following each case. The density and diversity of cultured colony forming units (CFUs) between the covered and uncovered machines were compared using Wilcoxon signed-rank test and Student's t -tests. There was a statistically significant reduction in CFU density and diversity when the AMW was employed. The protective effect of the AMW during regular anesthetic care provides a reliable and low-cost method to minimize the transmission of pathogens across patients and potentially reduces HAIs.

  18. A Method for Solving the Voltage and Torque Equations of the Split-Phase Induction Machines

    Directory of Open Access Journals (Sweden)

    G. A. Olarinoye

    2013-06-01

    Full Text Available Single phase induction machines have been the subject of many researches in recent times. The voltage and torque equations which describe the dynamic characteristics of these machines have been quoted in many papers, including the papers that present the simulation results of these model equations. The way and manner in which these equations are solved is not common in literature. This paper presents a detailed procedure of how these equations are to be solved with respect to the splitphase induction machine which is one of the different types of the single phase induction machines available in the market. In addition, these equations have been used to simulate the start-up response of the split phase induction motor on no-load. The free acceleration characteristics of the motor voltages, currents and electromagnetic torque have been plotted and discussed. The simulation results presented include the instantaneous torque-speed characteristics of the Split phase Induction machine. A block diagram of the method for the solution of the machine equations has also been presented.

  19. MEDLINE MeSH Indexing: Lessons Learned from Machine Learning and Future Directions

    DEFF Research Database (Denmark)

    Jimeno-Yepes, Antonio; Mork, James G.; Wilkowski, Bartlomiej

    2012-01-01

    and analyzed the issues when using standard machine learning algorithms. We show that in some cases machine learning can improve the annotations already recommended by MTI, that machine learning based on low variance methods achieves better performance and that each MeSH heading presents a different behavior......Map and a k-NN approach called PubMed Related Citations (PRC). Our motivation is to improve the quality of MTI based on machine learning. Typical machine learning approaches fit this indexing task into text categorization. In this work, we have studied some Medical Subject Headings (MeSH) recommended by MTI...

  20. One method for life time estimation of a bucket wheel machine for coal moving

    Science.gov (United States)

    Vîlceanu, Fl; Iancu, C.

    2016-08-01

    Rehabilitation of outdated equipment with lifetime expired, or in the ultimate life period, together with high cost investments for their replacement, makes rational the efforts made to extend their life. Rehabilitation involves checking operational safety based on relevant expertise of metal structures supporting effective resistance and assessing the residual lifetime. The bucket wheel machine for coal constitute basic machine within deposits of coal of power plants. The estimate of remaining life can be done by checking the loading on the most stressed subassembly by Finite Element Analysis on a welding detail. The paper presents step-by-step the method of calculus applied in order to establishing the residual lifetime of a bucket wheel machine for coal moving using non-destructive methods of study (fatigue cracking analysis + FEA). In order to establish the actual state of machine and areas subject to study, was done FEA of this mining equipment, performed on the geometric model of mechanical analyzed structures, with powerful CAD/FEA programs. By applying the method it can be calculated residual lifetime, by extending the results from the most stressed area of the equipment to the entire machine, and thus saving time and money from expensive replacements.

  1. MODAL ANALYSIS OF CARRIER SYSTEM FOR HEAVY HORIZONTAL MULTIFUNCTION MACHINING CENTER BY FINITE ELEMENT METHOD

    Directory of Open Access Journals (Sweden)

    Yu. V. Vasilevich

    2014-01-01

    Full Text Available The aim of the paper is to reveal and analyze resonance modes of a large-scale milling-drilling-boring machine. The machine has a movable column with vertical slot occupied by a symmetrical carriage with horizontal ram. Static rigidity of the machine is relatively low due to its large dimensions. So it is necessary to assess possible vibration activity. Virtual and operational trials of the machine have been carried out simultaneously. Modeling has been executed with the help of a finite element method (FEM. The FEM-model takes into account not only rigidity of machine structures but also flexibility of bearings, feed drive systems and guides. Modal FEM-analysis has revealed eight resonance modes that embrace the whole machine tool. They form a frequency interval from 12 to 75 Hz which is undesirable for machining. Three closely located resonances (31-37 Hz are considered as the most dangerous ones. They represent various combinations of three simple motions: vertical oscillations of a carriage, horizontal vibrations of a ram and column torsion. Reliability of FEM- estimations has been proved by in-situ vibration measurements.An effect for stabilization of resonance modes has been detected while making variations in design parameters of the machine tool. For example, a virtual replacement of cast iron for steel in machine structures practically does not have any effect on resonance frequencies. Rigidity increase in some parts (e.g. a ram has also a small effect on a resonance pattern. On the other hand, resonance stability makes it possible to avoid them while selecting a spindle rotation frequency.It is recommended to set double feed drives for all axes. A pair of vertical screws prevents a “pecking” resonance of the carriage at frequency of 54 Hz. It is necessary to foresee an operation of a main drive of such heavy machine tool in the above resonance interval with the spindle frequency of more than 75 Hz. For this purpose it is necessary

  2. A Comparison of Machine Learning Methods in a High-Dimensional Classification Problem

    OpenAIRE

    Zekić-Sušac, Marijana; Pfeifer, Sanja; Šarlija, Nataša

    2014-01-01

    Background: Large-dimensional data modelling often relies on variable reduction methods in the pre-processing and in the post-processing stage. However, such a reduction usually provides less information and yields a lower accuracy of the model. Objectives: The aim of this paper is to assess the high-dimensional classification problem of recognizing entrepreneurial intentions of students by machine learning methods. Methods/Approach: Four methods were tested: artificial neural networks, CART ...

  3. Detecting Milling Deformation in 7075 Aluminum Alloy Aeronautical Monolithic Components Using the Quasi-Symmetric Machining Method

    Directory of Open Access Journals (Sweden)

    Qiong Wu

    2016-04-01

    Full Text Available The deformation of aeronautical monolithic components due to CNC machining is a bottle-neck issue in the aviation industry. The residual stress releases and redistributes in the process of material removal, and the distortion of the monolithic component is generated. The traditional one-side machining method will produce oversize deformation. Based on the three-stage CNC machining method, the quasi-symmetric machining method is developed in this study to reduce deformation by symmetry material removal using the M-symmetry distribution law of residual stress. The mechanism of milling deformation due to residual stress is investigated. A deformation experiment was conducted using traditional one-side machining method and quasi-symmetric machining method to compare with finite element method (FEM. The deformation parameters are validated by comparative results. Most of the errors are within 10%. The reason for these errors is determined to improve the reliability of the method. Moreover, the maximum deformation value of using quasi-symmetric machining method is within 20% of that of using the traditional one-side machining method. This result shows the quasi-symmetric machining method is effective in reducing deformation caused by residual stress. Thus, this research introduces an effective method for reducing the deformation of monolithic thin-walled components in the CNC milling process.

  4. SELECTION OF NON-CONVENTIONAL MACHINING PROCESSES USING THE OCRA METHOD

    Directory of Open Access Journals (Sweden)

    Miloš Madić

    2015-04-01

    Full Text Available Selection of the most suitable nonconventional machining process (NCMP for a given machining application can be viewed as multi-criteria decision making (MCDM problem with many conflicting and diverse criteria. To aid these selection processes, different MCDM methods have been proposed. This paper introduces the use of an almost unexplored MCDM method, i.e. operational competitiveness ratings analysis (OCRA method for solving the NCMP selection problems. Applicability, suitability and computational procedure of OCRA method have been demonstrated while solving three case studies dealing with selection of the most suitable NCMP. In each case study the obtained rankings were compared with those derived by the past researchers using different MCDM methods. The results obtained using the OCRA method have good correlation with those derived by the past researchers which validate the usefulness of this method while solving complex NCMP selection problems.

  5. A Review of Current Machine Learning Methods Used for Cancer Recurrence Modeling and Prediction

    Energy Technology Data Exchange (ETDEWEB)

    Hemphill, Geralyn M. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2016-09-27

    Cancer has been characterized as a heterogeneous disease consisting of many different subtypes. The early diagnosis and prognosis of a cancer type has become a necessity in cancer research. A major challenge in cancer management is the classification of patients into appropriate risk groups for better treatment and follow-up. Such risk assessment is critically important in order to optimize the patient’s health and the use of medical resources, as well as to avoid cancer recurrence. This paper focuses on the application of machine learning methods for predicting the likelihood of a recurrence of cancer. It is not meant to be an extensive review of the literature on the subject of machine learning techniques for cancer recurrence modeling. Other recent papers have performed such a review, and I will rely heavily on the results and outcomes from these papers. The electronic databases that were used for this review include PubMed, Google, and Google Scholar. Query terms used include “cancer recurrence modeling”, “cancer recurrence and machine learning”, “cancer recurrence modeling and machine learning”, and “machine learning for cancer recurrence and prediction”. The most recent and most applicable papers to the topic of this review have been included in the references. It also includes a list of modeling and classification methods to predict cancer recurrence.

  6. Optimal design method to minimize users' thinking mapping load in human-machine interactions.

    Science.gov (United States)

    Huang, Yanqun; Li, Xu; Zhang, Jie

    2015-01-01

    The discrepancy between human cognition and machine requirements/behaviors usually results in serious mental thinking mapping loads or even disasters in product operating. It is important to help people avoid human-machine interaction confusions and difficulties in today's mental work mastered society. Improving the usability of a product and minimizing user's thinking mapping and interpreting load in human-machine interactions. An optimal human-machine interface design method is introduced, which is based on the purpose of minimizing the mental load in thinking mapping process between users' intentions and affordance of product interface states. By analyzing the users' thinking mapping problem, an operating action model is constructed. According to human natural instincts and acquired knowledge, an expected ideal design with minimized thinking loads is uniquely determined at first. Then, creative alternatives, in terms of the way human obtains operational information, are provided as digital interface states datasets. In the last, using the cluster analysis method, an optimum solution is picked out from alternatives, by calculating the distances between two datasets. Considering multiple factors to minimize users' thinking mapping loads, a solution nearest to the ideal value is found in the human-car interaction design case. The clustering results show its effectiveness in finding an optimum solution to the mental load minimizing problems in human-machine interaction design.

  7. Application of machine learning methods for traffic signs recognition

    Science.gov (United States)

    Filatov, D. V.; Ignatev, K. V.; Deviatkin, A. V.; Serykh, E. V.

    2018-02-01

    This paper focuses on solving a relevant and pressing safety issue on intercity roads. Two approaches were considered for solving the problem of traffic signs recognition; the approaches involved neural networks to analyze images obtained from a camera in the real-time mode. The first approach is based on a sequential image processing. At the initial stage, with the help of color filters and morphological operations (dilatation and erosion), the area containing the traffic sign is located on the image, then the selected and scaled fragment of the image is analyzed using a feedforward neural network to determine the meaning of the found traffic sign. Learning of the neural network in this approach is carried out using a backpropagation method. The second approach involves convolution neural networks at both stages, i.e. when searching and selecting the area of the image containing the traffic sign, and when determining its meaning. Learning of the neural network in the second approach is carried out using the intersection over union function and a loss function. For neural networks to learn and the proposed algorithms to be tested, a series of videos from a dash cam were used that were shot under various weather and illumination conditions. As a result, the proposed approaches for traffic signs recognition were analyzed and compared by key indicators such as recognition rate percentage and the complexity of neural networks’ learning process.

  8. Non Machinable Volume Calculation Method for 5-Axis Roughing Based on Faceted Models through Closed Bounded Area Evaluation

    Directory of Open Access Journals (Sweden)

    Kiswanto Gandjar

    2017-01-01

    Full Text Available The increase in the volume of rough machining on the CBV area is one of the indicators of increased efficiencyof machining process. Normally, this area is not subject to the rough machining process, so that the volume of the rest of the material is still big. With the addition of CC point and tool orientation to CBV area on a complex surface, the finishing will be faster because the volume of the excess material on this process will be reduced. This paper presents a method for volume calculation of the parts which do not allow further occurrence of the machining process, particulary for rough machining on a complex object. By comparing the total volume of raw materials and machining area volume, the volume of residual material,on which machining process cannot be done,can be determined. The volume of the total machining area has been taken into account for machiningof the CBV and non CBV areas. By using delaunay triangulation for the triangle which includes the machining and CBV areas. The volume will be calculated using Divergence(Gaussian theorem by focusing on the direction of the normal vector on each triangle. This method can be used as an alternative to selecting tothe rough machining methods which select minimum value of nonmachinable volume so that effectiveness can be achieved in the machining process.

  9. The Relevance Voxel Machine (RVoxM): A Bayesian Method for Image-Based Prediction

    DEFF Research Database (Denmark)

    Sabuncu, Mert R.; Van Leemput, Koen

    2011-01-01

    This paper presents the Relevance VoxelMachine (RVoxM), a Bayesian multivariate pattern analysis (MVPA) algorithm that is specifically designed for making predictions based on image data. In contrast to generic MVPA algorithms that have often been used for this purpose, the method is designed to ...

  10. SU-F-R-05: Multidimensional Imaging Radiomics-Geodesics: A Novel Manifold Learning Based Automatic Feature Extraction Method for Diagnostic Prediction in Multiparametric Imaging

    Energy Technology Data Exchange (ETDEWEB)

    Parekh, V [The Johns Hopkins University, Computer Science. Baltimore, MD (United States); Jacobs, MA [The Johns Hopkins University School of Medicine, Dept of Radiology and Oncology. Baltimore, MD (United States)

    2016-06-15

    Purpose: Multiparametric radiological imaging is used for diagnosis in patients. Potentially extracting useful features specific to a patient’s pathology would be crucial step towards personalized medicine and assessing treatment options. In order to automatically extract features directly from multiparametric radiological imaging datasets, we developed an advanced unsupervised machine learning algorithm called the multidimensional imaging radiomics-geodesics(MIRaGe). Methods: Seventy-six breast tumor patients underwent 3T MRI breast imaging were used for this study. We tested the MIRaGe algorithm to extract features for classification of breast tumors into benign or malignant. The MRI parameters used were T1-weighted, T2-weighted, dynamic contrast enhanced MR imaging (DCE-MRI) and diffusion weighted imaging(DWI). The MIRaGe algorithm extracted the radiomics-geodesics features (RGFs) from multiparametric MRI datasets. This enable our method to learn the intrinsic manifold representations corresponding to the patients. To determine the informative RGF, a modified Isomap algorithm(t-Isomap) was created for a radiomics-geodesics feature space(tRGFS) to avoid overfitting. Final classification was performed using SVM. The predictive power of the RGFs was tested and validated using k-fold cross validation. Results: The RGFs extracted by the MIRaGe algorithm successfully classified malignant lesions from benign lesions with a sensitivity of 93% and a specificity of 91%. The top 50 RGFs identified as the most predictive by the t-Isomap procedure were consistent with the radiological parameters known to be associated with breast cancer diagnosis and were categorized as kinetic curve characterizing RGFs, wash-in rate characterizing RGFs, wash-out rate characterizing RGFs and morphology characterizing RGFs. Conclusion: In this paper, we developed a novel feature extraction algorithm for multiparametric radiological imaging. The results demonstrated the power of the MIRa

  11. SU-F-R-05: Multidimensional Imaging Radiomics-Geodesics: A Novel Manifold Learning Based Automatic Feature Extraction Method for Diagnostic Prediction in Multiparametric Imaging

    International Nuclear Information System (INIS)

    Parekh, V; Jacobs, MA

    2016-01-01

    Purpose: Multiparametric radiological imaging is used for diagnosis in patients. Potentially extracting useful features specific to a patient’s pathology would be crucial step towards personalized medicine and assessing treatment options. In order to automatically extract features directly from multiparametric radiological imaging datasets, we developed an advanced unsupervised machine learning algorithm called the multidimensional imaging radiomics-geodesics(MIRaGe). Methods: Seventy-six breast tumor patients underwent 3T MRI breast imaging were used for this study. We tested the MIRaGe algorithm to extract features for classification of breast tumors into benign or malignant. The MRI parameters used were T1-weighted, T2-weighted, dynamic contrast enhanced MR imaging (DCE-MRI) and diffusion weighted imaging(DWI). The MIRaGe algorithm extracted the radiomics-geodesics features (RGFs) from multiparametric MRI datasets. This enable our method to learn the intrinsic manifold representations corresponding to the patients. To determine the informative RGF, a modified Isomap algorithm(t-Isomap) was created for a radiomics-geodesics feature space(tRGFS) to avoid overfitting. Final classification was performed using SVM. The predictive power of the RGFs was tested and validated using k-fold cross validation. Results: The RGFs extracted by the MIRaGe algorithm successfully classified malignant lesions from benign lesions with a sensitivity of 93% and a specificity of 91%. The top 50 RGFs identified as the most predictive by the t-Isomap procedure were consistent with the radiological parameters known to be associated with breast cancer diagnosis and were categorized as kinetic curve characterizing RGFs, wash-in rate characterizing RGFs, wash-out rate characterizing RGFs and morphology characterizing RGFs. Conclusion: In this paper, we developed a novel feature extraction algorithm for multiparametric radiological imaging. The results demonstrated the power of the MIRa

  12. Feasibility of Machine Learning Methods for Separating Wood and Leaf Points from Terrestrial Laser Scanning Data

    Science.gov (United States)

    Wang, D.; Hollaus, M.; Pfeifer, N.

    2017-09-01

    Classification of wood and leaf components of trees is an essential prerequisite for deriving vital tree attributes, such as wood mass, leaf area index (LAI) and woody-to-total area. Laser scanning emerges to be a promising solution for such a request. Intensity based approaches are widely proposed, as different components of a tree can feature discriminatory optical properties at the operating wavelengths of a sensor system. For geometry based methods, machine learning algorithms are often used to separate wood and leaf points, by providing proper training samples. However, it remains unclear how the chosen machine learning classifier and features used would influence classification results. To this purpose, we compare four popular machine learning classifiers, namely Support Vector Machine (SVM), Na¨ıve Bayes (NB), Random Forest (RF), and Gaussian Mixture Model (GMM), for separating wood and leaf points from terrestrial laser scanning (TLS) data. Two trees, an Erytrophleum fordii and a Betula pendula (silver birch) are used to test the impacts from classifier, feature set, and training samples. Our results showed that RF is the best model in terms of accuracy, and local density related features are important. Experimental results confirmed the feasibility of machine learning algorithms for the reliable classification of wood and leaf points. It is also noted that our studies are based on isolated trees. Further tests should be performed on more tree species and data from more complex environments.

  13. FEASIBILITY OF MACHINE LEARNING METHODS FOR SEPARATING WOOD AND LEAF POINTS FROM TERRESTRIAL LASER SCANNING DATA

    Directory of Open Access Journals (Sweden)

    D. Wang

    2017-09-01

    Full Text Available Classification of wood and leaf components of trees is an essential prerequisite for deriving vital tree attributes, such as wood mass, leaf area index (LAI and woody-to-total area. Laser scanning emerges to be a promising solution for such a request. Intensity based approaches are widely proposed, as different components of a tree can feature discriminatory optical properties at the operating wavelengths of a sensor system. For geometry based methods, machine learning algorithms are often used to separate wood and leaf points, by providing proper training samples. However, it remains unclear how the chosen machine learning classifier and features used would influence classification results. To this purpose, we compare four popular machine learning classifiers, namely Support Vector Machine (SVM, Na¨ıve Bayes (NB, Random Forest (RF, and Gaussian Mixture Model (GMM, for separating wood and leaf points from terrestrial laser scanning (TLS data. Two trees, an Erytrophleum fordii and a Betula pendula (silver birch are used to test the impacts from classifier, feature set, and training samples. Our results showed that RF is the best model in terms of accuracy, and local density related features are important. Experimental results confirmed the feasibility of machine learning algorithms for the reliable classification of wood and leaf points. It is also noted that our studies are based on isolated trees. Further tests should be performed on more tree species and data from more complex environments.

  14. Method of control of machining accuracy of low-rigidity elastic-deformable shafts

    Directory of Open Access Journals (Sweden)

    Antoni Świć

    Full Text Available The paper presents an analysis of the possibility of increasing the accuracy and stability of machining of low-rigidity shafts while ensuring high efficiency and economy of their machining. An effective way of improving the accuracy of machining of shafts is increasing their rigidity as a result of oriented change of the elastic-deformable state through the application of a tensile force which, combined with the machining force, forms longitudinal-lateral strains. The paper also presents mathematical models describing the changes of the elastic-deformable state resulting from the application of the tensile force. It presents the results of experimental studies on the deformation of elastic low-rigidity shafts, performed on a special test stand developed on the basis of a lathe. An estimation was made of the effectiveness of the method of control of the elastic-deformable state with the use, as the regulating effects, the tensile force and eccentricity. It was demonstrated that controlling the two parameters: tensile force and eccentricity, one can improve the accuracy of machining, and thus achieve a theoretically assumed level of accuracy.

  15. Optimization of the Machining parameter of LM6 Alminium alloy in CNC Turning using Taguchi method

    Science.gov (United States)

    Arunkumar, S.; Muthuraman, V.; Baskaralal, V. P. M.

    2017-03-01

    Due to widespread use of highly automated machine tools in the industry, manufacturing requires reliable models and methods for the prediction of output performance of machining process. In machining of parts, surface quality is one of the most specified customer requirements. In order for manufactures to maximize their gains from utilizing CNC turning, accurate predictive models for surface roughness must be constructed. The prediction of optimum machining conditions for good surface finish plays an important role in process planning. This work deals with the study and development of a surface roughness prediction model for machining LM6 aluminum alloy. Two important tools used in parameter design are Taguchi orthogonal arrays and signal to noise ratio (S/N). Speed, feed, depth of cut and coolant are taken as process parameter at three levels. Taguchi’s parameters design is employed here to perform the experiments based on the various level of the chosen parameter. The statistical analysis results in optimum parameter combination of speed, feed, depth of cut and coolant as the best for obtaining good roughness for the cylindrical components. The result obtained through Taguchi is confirmed with real time experimental work.

  16. Retention system and method for the blades of a rotary machine

    Science.gov (United States)

    Pedersen, Poul D.; Glynn, Christopher C.; Walker, Roger C.

    2002-01-01

    A retention system and method for the blades of a rotary machine for preventing forward or aft axial movement of the rotor blades includes a circumferential hub slot formed about a circumference of the machine hub. The rotor blades have machined therein a blade retention slot which is aligned with the circumferential hub slot when the blades are received in correspondingly shaped openings in the hub. At least one ring segment is secured in the blade retention slots and the circumferential hub slot to retain the blades from axial movement. A key assembly is used to secure the ring segments in the aligned slots via a hook portion receiving the ring segments and a threaded portion that is driven radially outwardly by a nut. A cap may be provided to provide a redundant back-up load path for the centrifugal loads on the key. Alternatively, the key assembly may be formed in the blade dovetail.

  17. Probability estimation with machine learning methods for dichotomous and multicategory outcome: theory.

    Science.gov (United States)

    Kruppa, Jochen; Liu, Yufeng; Biau, Gérard; Kohler, Michael; König, Inke R; Malley, James D; Ziegler, Andreas

    2014-07-01

    Probability estimation for binary and multicategory outcome using logistic and multinomial logistic regression has a long-standing tradition in biostatistics. However, biases may occur if the model is misspecified. In contrast, outcome probabilities for individuals can be estimated consistently with machine learning approaches, including k-nearest neighbors (k-NN), bagged nearest neighbors (b-NN), random forests (RF), and support vector machines (SVM). Because machine learning methods are rarely used by applied biostatisticians, the primary goal of this paper is to explain the concept of probability estimation with these methods and to summarize recent theoretical findings. Probability estimation in k-NN, b-NN, and RF can be embedded into the class of nonparametric regression learning machines; therefore, we start with the construction of nonparametric regression estimates and review results on consistency and rates of convergence. In SVMs, outcome probabilities for individuals are estimated consistently by repeatedly solving classification problems. For SVMs we review classification problem and then dichotomous probability estimation. Next we extend the algorithms for estimating probabilities using k-NN, b-NN, and RF to multicategory outcomes and discuss approaches for the multicategory probability estimation problem using SVM. In simulation studies for dichotomous and multicategory dependent variables we demonstrate the general validity of the machine learning methods and compare it with logistic regression. However, each method fails in at least one simulation scenario. We conclude with a discussion of the failures and give recommendations for selecting and tuning the methods. Applications to real data and example code are provided in a companion article (doi:10.1002/bimj.201300077). © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  18. Machine learning a probabilistic perspective

    CERN Document Server

    Murphy, Kevin P

    2012-01-01

    Today's Web-enabled deluge of electronic data calls for automated methods of data analysis. Machine learning provides these, developing methods that can automatically detect patterns in data and then use the uncovered patterns to predict future data. This textbook offers a comprehensive and self-contained introduction to the field of machine learning, based on a unified, probabilistic approach. The coverage combines breadth and depth, offering necessary background material on such topics as probability, optimization, and linear algebra as well as discussion of recent developments in the field, including conditional random fields, L1 regularization, and deep learning. The book is written in an informal, accessible style, complete with pseudo-code for the most important algorithms. All topics are copiously illustrated with color images and worked examples drawn from such application domains as biology, text processing, computer vision, and robotics. Rather than providing a cookbook of different heuristic method...

  19. In Silico Prediction of Chemical Toxicity for Drug Design Using Machine Learning Methods and Structural Alerts

    Science.gov (United States)

    Yang, Hongbin; Sun, Lixia; Li, Weihua; Liu, Guixia; Tang, Yun

    2018-02-01

    For a drug, safety is always the most important issue, including a variety of toxicities and adverse drug effects, which should be evaluated in preclinical and clinical trial phases. This review article at first simply introduced the computational methods used in prediction of chemical toxicity for drug design, including machine learning methods and structural alerts. Machine learning methods have been widely applied in qualitative classification and quantitative regression studies, while structural alerts can be regarded as a complementary tool for lead optimization. The emphasis of this article was put on the recent progress of predictive models built for various toxicities. Available databases and web servers were also provided. Though the methods and models are very helpful for drug design, there are still some challenges and limitations to be improved for drug safety assessment in the future.

  20. In Silico Prediction of Chemical Toxicity for Drug Design Using Machine Learning Methods and Structural Alerts

    Directory of Open Access Journals (Sweden)

    Hongbin Yang

    2018-02-01

    Full Text Available During drug development, safety is always the most important issue, including a variety of toxicities and adverse drug effects, which should be evaluated in preclinical and clinical trial phases. This review article at first simply introduced the computational methods used in prediction of chemical toxicity for drug design, including machine learning methods and structural alerts. Machine learning methods have been widely applied in qualitative classification and quantitative regression studies, while structural alerts can be regarded as a complementary tool for lead optimization. The emphasis of this article was put on the recent progress of predictive models built for various toxicities. Available databases and web servers were also provided. Though the methods and models are very helpful for drug design, there are still some challenges and limitations to be improved for drug safety assessment in the future.

  1. In Silico Prediction of Chemical Toxicity for Drug Design Using Machine Learning Methods and Structural Alerts.

    Science.gov (United States)

    Yang, Hongbin; Sun, Lixia; Li, Weihua; Liu, Guixia; Tang, Yun

    2018-01-01

    During drug development, safety is always the most important issue, including a variety of toxicities and adverse drug effects, which should be evaluated in preclinical and clinical trial phases. This review article at first simply introduced the computational methods used in prediction of chemical toxicity for drug design, including machine learning methods and structural alerts. Machine learning methods have been widely applied in qualitative classification and quantitative regression studies, while structural alerts can be regarded as a complementary tool for lead optimization. The emphasis of this article was put on the recent progress of predictive models built for various toxicities. Available databases and web servers were also provided. Though the methods and models are very helpful for drug design, there are still some challenges and limitations to be improved for drug safety assessment in the future.

  2. Dual linear structured support vector machine tracking method via scale correlation filter

    Science.gov (United States)

    Li, Weisheng; Chen, Yanquan; Xiao, Bin; Feng, Chen

    2018-01-01

    Adaptive tracking-by-detection methods based on structured support vector machine (SVM) performed well on recent visual tracking benchmarks. However, these methods did not adopt an effective strategy of object scale estimation, which limits the overall tracking performance. We present a tracking method based on a dual linear structured support vector machine (DLSSVM) with a discriminative scale correlation filter. The collaborative tracker comprised of a DLSSVM model and a scale correlation filter obtains good results in tracking target position and scale estimation. The fast Fourier transform is applied for detection. Extensive experiments show that our tracking approach outperforms many popular top-ranking trackers. On a benchmark including 100 challenging video sequences, the average precision of the proposed method is 82.8%.

  3. Design of a new torque standard machine based on a torque generation method using electromagnetic force

    International Nuclear Information System (INIS)

    Nishino, Atsuhiro; Ueda, Kazunaga; Fujii, Kenichi

    2017-01-01

    To allow the application of torque standards in various industries, we have been developing torque standard machines based on a lever deadweight system, i.e. a torque generation method using gravity. However, this method is not suitable for expanding the low end of the torque range, because of the limitations to the sizes of the weights and moment arms. In this study, the working principle of the torque generation method using an electromagnetic force was investigated by referring to watt balance experiments used for the redefinition of the kilogram. Applying this principle to a rotating coordinate system, an electromagnetic force type torque standard machine was designed and prototyped. It was experimentally demonstrated that SI-traceable torque could be generated by converting electrical power to mechanical power. Thus, for the first time, SI-traceable torque was successfully realized using a method other than that based on the force of gravity. (paper)

  4. Gamma/hadron segregation for a ground based imaging atmospheric Cherenkov telescope using machine learning methods: Random Forest leads

    International Nuclear Information System (INIS)

    Sharma Mradul; Koul Maharaj Krishna; Mitra Abhas; Nayak Jitadeepa; Bose Smarajit

    2014-01-01

    A detailed case study of γ-hadron segregation for a ground based atmospheric Cherenkov telescope is presented. We have evaluated and compared various supervised machine learning methods such as the Random Forest method, Artificial Neural Network, Linear Discriminant method, Naive Bayes Classifiers, Support Vector Machines as well as the conventional dynamic supercut method by simulating triggering events with the Monte Carlo method and applied the results to a Cherenkov telescope. It is demonstrated that the Random Forest method is the most sensitive machine learning method for γ-hadron segregation. (research papers)

  5. A Method to Optimize Geometric Errors of Machine Tool based on SNR Quality Loss Function and Correlation Analysis

    Directory of Open Access Journals (Sweden)

    Cai Ligang

    2017-01-01

    Full Text Available Instead improving the accuracy of machine tool by increasing the precision of key components level blindly in the production process, the method of combination of SNR quality loss function and machine tool geometric error correlation analysis to optimize five-axis machine tool geometric errors will be adopted. Firstly, the homogeneous transformation matrix method will be used to build five-axis machine tool geometric error modeling. Secondly, the SNR quality loss function will be used for cost modeling. And then, machine tool accuracy optimal objective function will be established based on the correlation analysis. Finally, ISIGHT combined with MATLAB will be applied to optimize each error. The results show that this method is reasonable and appropriate to relax the range of tolerance values, so as to reduce the manufacturing cost of machine tools.

  6. A new method of machine vision reprocessing based on cellular neural networks

    International Nuclear Information System (INIS)

    Jianhua, W.; Liping, Z.; Fenfang, Z.; Guojian, H.

    1996-01-01

    This paper proposed a method of image preprocessing in machine vision based on Cellular Neural Network (CNN). CNN is introduced to design image smoothing, image recovering, image boundary detecting and other image preprocessing problems. The proposed methods are so simple that the speed of algorithms are increased greatly to suit the needs of real-time image processing. The experimental results show a satisfactory reply

  7. A Novel Application of Machine Learning Methods to Model Microcontroller Upset Due to Intentional Electromagnetic Interference

    Science.gov (United States)

    Bilalic, Rusmir

    A novel application of support vector machines (SVMs), artificial neural networks (ANNs), and Gaussian processes (GPs) for machine learning (GPML) to model microcontroller unit (MCU) upset due to intentional electromagnetic interference (IEMI) is presented. In this approach, an MCU performs a counting operation (0-7) while electromagnetic interference in the form of a radio frequency (RF) pulse is direct-injected into the MCU clock line. Injection times with respect to the clock signal are the clock low, clock rising edge, clock high, and the clock falling edge periods in the clock window during which the MCU is performing initialization and executing the counting procedure. The intent is to cause disruption in the counting operation and model the probability of effect (PoE) using machine learning tools. Five experiments were executed as part of this research, each of which contained a set of 38,300 training points and 38,300 test points, for a total of 383,000 total points with the following experiment variables: injection times with respect to the clock signal, injected RF power, injected RF pulse width, and injected RF frequency. For the 191,500 training points, the average training error was 12.47%, while for the 191,500 test points the average test error was 14.85%, meaning that on average, the machine was able to predict MCU upset with an 85.15% accuracy. Leaving out the results for the worst-performing model (SVM with a linear kernel), the test prediction accuracy for the remaining machines is almost 89%. All three machine learning methods (ANNs, SVMs, and GPML) showed excellent and consistent results in their ability to model and predict the PoE on an MCU due to IEMI. The GP approach performed best during training with a 7.43% average training error, while the ANN technique was most accurate during the test with a 10.80% error.

  8. Machine learning methods for the classification of gliomas: Initial results using features extracted from MR spectroscopy.

    Science.gov (United States)

    Ranjith, G; Parvathy, R; Vikas, V; Chandrasekharan, Kesavadas; Nair, Suresh

    2015-04-01

    With the advent of new imaging modalities, radiologists are faced with handling increasing volumes of data for diagnosis and treatment planning. The use of automated and intelligent systems is becoming essential in such a scenario. Machine learning, a branch of artificial intelligence, is increasingly being used in medical image analysis applications such as image segmentation, registration and computer-aided diagnosis and detection. Histopathological analysis is currently the gold standard for classification of brain tumors. The use of machine learning algorithms along with extraction of relevant features from magnetic resonance imaging (MRI) holds promise of replacing conventional invasive methods of tumor classification. The aim of the study is to classify gliomas into benign and malignant types using MRI data. Retrospective data from 28 patients who were diagnosed with glioma were used for the analysis. WHO Grade II (low-grade astrocytoma) was classified as benign while Grade III (anaplastic astrocytoma) and Grade IV (glioblastoma multiforme) were classified as malignant. Features were extracted from MR spectroscopy. The classification was done using four machine learning algorithms: multilayer perceptrons, support vector machine, random forest and locally weighted learning. Three of the four machine learning algorithms gave an area under ROC curve in excess of 0.80. Random forest gave the best performance in terms of AUC (0.911) while sensitivity was best for locally weighted learning (86.1%). The performance of different machine learning algorithms in the classification of gliomas is promising. An even better performance may be expected by integrating features extracted from other MR sequences. © The Author(s) 2015 Reprints and permissions: sagepub.co.uk/journalsPermissions.nav.

  9. Comparing SVM and ANN based Machine Learning Methods for Species Identification of Food Contaminating Beetles.

    Science.gov (United States)

    Bisgin, Halil; Bera, Tanmay; Ding, Hongjian; Semey, Howard G; Wu, Leihong; Liu, Zhichao; Barnes, Amy E; Langley, Darryl A; Pava-Ripoll, Monica; Vyas, Himansu J; Tong, Weida; Xu, Joshua

    2018-04-25

    Insect pests, such as pantry beetles, are often associated with food contaminations and public health risks. Machine learning has the potential to provide a more accurate and efficient solution in detecting their presence in food products, which is currently done manually. In our previous research, we demonstrated such feasibility where Artificial Neural Network (ANN) based pattern recognition techniques could be implemented for species identification in the context of food safety. In this study, we present a Support Vector Machine (SVM) model which improved the average accuracy up to 85%. Contrary to this, the ANN method yielded ~80% accuracy after extensive parameter optimization. Both methods showed excellent genus level identification, but SVM showed slightly better accuracy  for most species. Highly accurate species level identification remains a challenge, especially in distinguishing between species from the same genus which may require improvements in both imaging and machine learning techniques. In summary, our work does illustrate a new SVM based technique and provides a good comparison with the ANN model in our context. We believe such insights will pave better way forward for the application of machine learning towards species identification and food safety.

  10. Review of smoothing methods for enhancement of noisy data from heavy-duty LHD mining machines

    Science.gov (United States)

    Wodecki, Jacek; Michalak, Anna; Stefaniak, Paweł

    2018-01-01

    Appropriate analysis of data measured on heavy-duty mining machines is essential for processes monitoring, management and optimization. Some particular classes of machines, for example LHD (load-haul-dump) machines, hauling trucks, drilling/bolting machines etc. are characterized with cyclicity of operations. In those cases, identification of cycles and their segments or in other words - simply data segmentation is a key to evaluate their performance, which may be very useful from the management point of view, for example leading to introducing optimization to the process. However, in many cases such raw signals are contaminated with various artifacts, and in general are expected to be very noisy, which makes the segmentation task very difficult or even impossible. To deal with that problem, there is a need for efficient smoothing methods that will allow to retain informative trends in the signals while disregarding noises and other undesired non-deterministic components. In this paper authors present a review of various approaches to diagnostic data smoothing. Described methods can be used in a fast and efficient way, effectively cleaning the signals while preserving informative deterministic behaviour, that is a crucial to precise segmentation and other approaches to industrial data analysis.

  11. Identification of Village Building via Google Earth Images and Supervised Machine Learning Methods

    Directory of Open Access Journals (Sweden)

    Zhiling Guo

    2016-03-01

    Full Text Available In this study, a method based on supervised machine learning is proposed to identify village buildings from open high-resolution remote sensing images. We select Google Earth (GE RGB images to perform the classification in order to examine its suitability for village mapping, and investigate the feasibility of using machine learning methods to provide automatic classification in such fields. By analyzing the characteristics of GE images, we design different features on the basis of two kinds of supervised machine learning methods for classification: adaptive boosting (AdaBoost and convolutional neural networks (CNN. To recognize village buildings via their color and texture information, the RGB color features and a large number of Haar-like features in a local window are utilized in the AdaBoost method; with multilayer trained networks based on gradient descent algorithms and back propagation, CNN perform the identification by mining deeper information from buildings and their neighborhood. Experimental results from the testing area at Savannakhet province in Laos show that our proposed AdaBoost method achieves an overall accuracy of 96.22% and the CNN method is also competitive with an overall accuracy of 96.30%.

  12. Missing data imputation using statistical and machine learning methods in a real breast cancer problem.

    Science.gov (United States)

    Jerez, José M; Molina, Ignacio; García-Laencina, Pedro J; Alba, Emilio; Ribelles, Nuria; Martín, Miguel; Franco, Leonardo

    2010-10-01

    Missing data imputation is an important task in cases where it is crucial to use all available data and not discard records with missing values. This work evaluates the performance of several statistical and machine learning imputation methods that were used to predict recurrence in patients in an extensive real breast cancer data set. Imputation methods based on statistical techniques, e.g., mean, hot-deck and multiple imputation, and machine learning techniques, e.g., multi-layer perceptron (MLP), self-organisation maps (SOM) and k-nearest neighbour (KNN), were applied to data collected through the "El Álamo-I" project, and the results were then compared to those obtained from the listwise deletion (LD) imputation method. The database includes demographic, therapeutic and recurrence-survival information from 3679 women with operable invasive breast cancer diagnosed in 32 different hospitals belonging to the Spanish Breast Cancer Research Group (GEICAM). The accuracies of predictions on early cancer relapse were measured using artificial neural networks (ANNs), in which different ANNs were estimated using the data sets with imputed missing values. The imputation methods based on machine learning algorithms outperformed imputation statistical methods in the prediction of patient outcome. Friedman's test revealed a significant difference (p=0.0091) in the observed area under the ROC curve (AUC) values, and the pairwise comparison test showed that the AUCs for MLP, KNN and SOM were significantly higher (p=0.0053, p=0.0048 and p=0.0071, respectively) than the AUC from the LD-based prognosis model. The methods based on machine learning techniques were the most suited for the imputation of missing values and led to a significant enhancement of prognosis accuracy compared to imputation methods based on statistical procedures. Copyright © 2010 Elsevier B.V. All rights reserved.

  13. Music Learning Based on Computer Software

    OpenAIRE

    Baihui Yan; Qiao Zhou

    2017-01-01

    In order to better develop and improve students’ music learning, the authors proposed the method of music learning based on computer software. It is still a new field to use computer music software to assist teaching. Hereby, we conducted an in-depth analysis on the computer-enabled music learning and the music learning status in secondary schools, obtaining the specific analytical data. Survey data shows that students have many cognitive problems in the current music classroom, and yet teach...

  14. Learning based particle filtering object tracking for visible-light systems.

    Science.gov (United States)

    Sun, Wei

    2015-10-01

    We propose a novel object tracking framework based on online learning scheme that can work robustly in challenging scenarios. Firstly, a learning-based particle filter is proposed with color and edge-based features. We train a. support vector machine (SVM) classifier with object and background information and map the outputs into probabilities, then the weight of particles in a particle filter can be calculated by the probabilistic outputs to estimate the state of the object. Secondly, the tracking loop starts with Lucas-Kanade (LK) affine template matching and follows by learning-based particle filter tracking. Lucas-Kanade method estimates errors and updates object template in the positive samples dataset, and learning-based particle filter tracker will start if the LK tracker loses the object. Finally, SVM classifier evaluates every tracked appearance to update the training set or restart the tracking loop if necessary. Experimental results show that our method is robust to challenging light, scale and pose changing, and test on eButton image sequence also achieves satisfactory tracking performance.

  15. e-Learning Application for Machine Maintenance Process using Iterative Method in XYZ Company

    Science.gov (United States)

    Nurunisa, Suaidah; Kurniawati, Amelia; Pramuditya Soesanto, Rayinda; Yunan Kurnia Septo Hediyanto, Umar

    2016-02-01

    XYZ Company is a company based on manufacturing part for airplane, one of the machine that is categorized as key facility in the company is Millac 5H6P. As a key facility, the machines should be assured to work well and in peak condition, therefore, maintenance process is needed periodically. From the data gathering, it is known that there are lack of competency from the maintenance staff to maintain different type of machine which is not assigned by the supervisor, this indicate that knowledge which possessed by maintenance staff are uneven. The purpose of this research is to create knowledge-based e-learning application as a realization from externalization process in knowledge transfer process to maintain the machine. The application feature are adjusted for maintenance purpose using e-learning framework for maintenance process, the content of the application support multimedia for learning purpose. QFD is used in this research to understand the needs from user. The application is built using moodle with iterative method for software development cycle and UML Diagram. The result from this research is e-learning application as sharing knowledge media for maintenance staff in the company. From the test, it is known that the application make maintenance staff easy to understand the competencies.

  16. A Novel Bearing Fault Diagnosis Method Based on Gaussian Restricted Boltzmann Machine

    Directory of Open Access Journals (Sweden)

    Xiao-hui He

    2016-01-01

    Full Text Available To realize the fault diagnosis of bearing effectively, this paper presents a novel bearing fault diagnosis method based on Gaussian restricted Boltzmann machine (Gaussian RBM. Vibration signals are firstly resampled to the same equivalent speed. Subsequently, the envelope spectrums of the resampled data are used directly as the feature vectors to represent the fault types of bearing. Finally, in order to deal with the high-dimensional feature vectors based on envelope spectrum, a classifier model based on Gaussian RBM is applied. Gaussian RBM has the ability to provide a closed-form representation of the distribution underlying the training data, and it is very convenient for modeling high-dimensional real-valued data. Experiments on 10 different data sets verify the performance of the proposed method. The superiority of Gaussian RBM classifier is also confirmed by comparing with other classifiers, such as extreme learning machine, support vector machine, and deep belief network. The robustness of the proposed method is also studied in this paper. It can be concluded that the proposed method can realize the bearing fault diagnosis accurately and effectively.

  17. Research on criticality analysis method of CNC machine tools components under fault rate correlation

    Science.gov (United States)

    Gui-xiang, Shen; Xian-zhuo, Zhao; Zhang, Ying-zhi; Chen-yu, Han

    2018-02-01

    In order to determine the key components of CNC machine tools under fault rate correlation, a system component criticality analysis method is proposed. Based on the fault mechanism analysis, the component fault relation is determined, and the adjacency matrix is introduced to describe it. Then, the fault structure relation is hierarchical by using the interpretive structure model (ISM). Assuming that the impact of the fault obeys the Markov process, the fault association matrix is described and transformed, and the Pagerank algorithm is used to determine the relative influence values, combined component fault rate under time correlation can obtain comprehensive fault rate. Based on the fault mode frequency and fault influence, the criticality of the components under the fault rate correlation is determined, and the key components are determined to provide the correct basis for equationting the reliability assurance measures. Finally, taking machining centers as an example, the effectiveness of the method is verified.

  18. Comparison of three methods for the calibration of cobalt-60 teletherapy machine

    International Nuclear Information System (INIS)

    Adewole, O.O.; Akinlade, B.I.; Oyekunle, O.E.; Ejeh, J.

    2011-01-01

    Two methods of indirect determination of dose rate (machine output) from the Cobalt-60 Teletherapy machines has been reviewed and compared with conventional measurement with dosimetry devices. The dose rate were determined by: (i) Conventional measurement (ii) Application of the law of radioactive decay and (iii) Assumption of 1 % radioactive decomposition per month. The dose rate at the depth of maximum dose (Z m ax), collimator size of 10cm x 10cm and Source to Skin Distance (SSD) of 80cm obtained from these methods were 203.7200cGy/min, 203.8090cGy/min and 203.9530cGy/min respectively. The ratio of dose rate obtained from measurement to that from calculations is within the tolerance value of 2%.

  19. Application of machine-learning methods to solid-state chemistry: ferromagnetism in transition metal alloys

    International Nuclear Information System (INIS)

    Landrum, G.A.Gregory A.; Genin, Hugh

    2003-01-01

    Machine-learning methods are a collection of techniques for building predictive models from experimental data. The algorithms are problem-independent: the chemistry and physics of the problem being studied are contained in the descriptors used to represent the known data. The application of a variety of machine-learning methods to the prediction of ferromagnetism in ordered and disordered transition metal alloys is presented. Applying a decision tree algorithm to build a predictive model for ordered phases results in a model that is 100% accurate. The same algorithm achieves 99% accuracy when trained on a data set containing both ordered and disordered phases. Details of the descriptor sets for both applications are also presented

  20. Use of machine learning methods to classify Universities based on the income structure

    Science.gov (United States)

    Terlyga, Alexandra; Balk, Igor

    2017-10-01

    In this paper we discuss use of machine learning methods such as self organizing maps, k-means and Ward’s clustering to perform classification of universities based on their income. This classification will allow us to quantitate classification of universities as teaching, research, entrepreneur, etc. which is important tool for government, corporations and general public alike in setting expectation and selecting universities to achieve different goals.

  1. A Hierarchical Approach Using Machine Learning Methods in Solar Photovoltaic Energy Production Forecasting

    OpenAIRE

    Zhaoxuan Li; SM Mahbobur Rahman; Rolando Vega; Bing Dong

    2016-01-01

    We evaluate and compare two common methods, artificial neural networks (ANN) and support vector regression (SVR), for predicting energy productions from a solar photovoltaic (PV) system in Florida 15 min, 1 h and 24 h ahead of time. A hierarchical approach is proposed based on the machine learning algorithms tested. The production data used in this work corresponds to 15 min averaged power measurements collected from 2014. The accuracy of the model is determined using computing error statisti...

  2. Machine learning and statistical methods for the prediction of maximal oxygen uptake: recent advances

    Directory of Open Access Journals (Sweden)

    Abut F

    2015-08-01

    Full Text Available Fatih Abut, Mehmet Fatih AkayDepartment of Computer Engineering, Çukurova University, Adana, TurkeyAbstract: Maximal oxygen uptake (VO2max indicates how many milliliters of oxygen the body can consume in a state of intense exercise per minute. VO2max plays an important role in both sport and medical sciences for different purposes, such as indicating the endurance capacity of athletes or serving as a metric in estimating the disease risk of a person. In general, the direct measurement of VO2max provides the most accurate assessment of aerobic power. However, despite a high level of accuracy, practical limitations associated with the direct measurement of VO2max, such as the requirement of expensive and sophisticated laboratory equipment or trained staff, have led to the development of various regression models for predicting VO2max. Consequently, a lot of studies have been conducted in the last years to predict VO2max of various target audiences, ranging from soccer athletes, nonexpert swimmers, cross-country skiers to healthy-fit adults, teenagers, and children. Numerous prediction models have been developed using different sets of predictor variables and a variety of machine learning and statistical methods, including support vector machine, multilayer perceptron, general regression neural network, and multiple linear regression. The purpose of this study is to give a detailed overview about the data-driven modeling studies for the prediction of VO2max conducted in recent years and to compare the performance of various VO2max prediction models reported in related literature in terms of two well-known metrics, namely, multiple correlation coefficient (R and standard error of estimate. The survey results reveal that with respect to regression methods used to develop prediction models, support vector machine, in general, shows better performance than other methods, whereas multiple linear regression exhibits the worst performance

  3. Method for strength calculating of structural elements of mobile machines for flash butt welding of rails

    Directory of Open Access Journals (Sweden)

    Andriy Valeriy Moltasov

    2017-12-01

    Full Text Available Purpose. The subject of this study is the strength of the loaded units of mobile machines for flash butt welding by refining high-strength rails. The theme of the work is related to the development of a technique for strength calculating of the insulation of the central axis of these machines. The aim of the paper is to establish the mathematical dependence of the pressure on the insulation on the magnitude of deflections of the central axis under the action of the upset force. Design/methodology/approach. Using the Mohr’s method, the displacements of the investigated sections of the central axis under the action of the upset force and the equivalent load distributed along the length of the insulation were calculated. The magnitude of the load distributed along the length of the insulation equivalent to the draft force was determined from the condition that the displacements of the same cross sections are equal under the action of this load and under the action of the upset force. Results. An analytical expression for establishing the relationship between the pressure acting on the insulation and the magnitude of the upset force and the geometric dimensions of the structural elements of the machine was obtained. Based on the condition of the strength of the insulation for crushing, an analytical expression for establishing the relationship between the length of insulation and the size of the upset force, the geometric dimensions of the structural elements of the machine, and the physical and mechanical properties of the insulation material was obtained. Originality/cost. The proposed methodology was tested in the calculation and design of the K1045 mobile rail welding machine, 4 of which is currently successfully used in the USA for welding rails in hard-to-reach places.

  4. Prediction of Human Drug Targets and Their Interactions Using Machine Learning Methods: Current and Future Perspectives.

    Science.gov (United States)

    Nath, Abhigyan; Kumari, Priyanka; Chaube, Radha

    2018-01-01

    Identification of drug targets and drug target interactions are important steps in the drug-discovery pipeline. Successful computational prediction methods can reduce the cost and time demanded by the experimental methods. Knowledge of putative drug targets and their interactions can be very useful for drug repurposing. Supervised machine learning methods have been very useful in drug target prediction and in prediction of drug target interactions. Here, we describe the details for developing prediction models using supervised learning techniques for human drug target prediction and their interactions.

  5. A Practical Torque Estimation Method for Interior Permanent Magnet Synchronous Machine in Electric Vehicles.

    Science.gov (United States)

    Wu, Zhihong; Lu, Ke; Zhu, Yuan

    2015-01-01

    The torque output accuracy of the IPMSM in electric vehicles using a state of the art MTPA strategy highly depends on the accuracy of machine parameters, thus, a torque estimation method is necessary for the safety of the vehicle. In this paper, a torque estimation method based on flux estimator with a modified low pass filter is presented. Moreover, by taking into account the non-ideal characteristic of the inverter, the torque estimation accuracy is improved significantly. The effectiveness of the proposed method is demonstrated through MATLAB/Simulink simulation and experiment.

  6. A New Energy-Based Method for 3-D Finite-Element Nonlinear Flux Linkage computation of Electrical Machines

    DEFF Research Database (Denmark)

    Lu, Kaiyuan; Rasmussen, Peter Omand; Ritchie, Ewen

    2011-01-01

    This paper presents a new method for computation of the nonlinear flux linkage in 3-D finite-element models (FEMs) of electrical machines. Accurate computation of the nonlinear flux linkage in 3-D FEM is not an easy task. Compared to the existing energy-perturbation method, the new technique......-perturbation method. The new method proposed is validated using experimental results on two different permanent magnet machines....

  7. Improved machine learning method for analysis of gas phase chemistry of peptides

    Directory of Open Access Journals (Sweden)

    Ahn Natalie

    2008-12-01

    Full Text Available Abstract Background Accurate peptide identification is important to high-throughput proteomics analyses that use mass spectrometry. Search programs compare fragmentation spectra (MS/MS of peptides from complex digests with theoretically derived spectra from a database of protein sequences. Improved discrimination is achieved with theoretical spectra that are based on simulating gas phase chemistry of the peptides, but the limited understanding of those processes affects the accuracy of predictions from theoretical spectra. Results We employed a robust data mining strategy using new feature annotation functions of MAE software, which revealed under-prediction of the frequency of occurrence in fragmentation of the second peptide bond. We applied methods of exploratory data analysis to pre-process the information in the MS/MS spectra, including data normalization and attribute selection, to reduce the attributes to a smaller, less correlated set for machine learning studies. We then compared our rule building machine learning program, DataSqueezer, with commonly used association rules and decision tree algorithms. All used machine learning algorithms produced similar results that were consistent with expected properties for a second gas phase mechanism at the second peptide bond. Conclusion The results provide compelling evidence that we have identified underlying chemical properties in the data that suggest the existence of an additional gas phase mechanism for the second peptide bond. Thus, the methods described in this study provide a valuable approach for analyses of this kind in the future.

  8. Application of PROMETHEE-GAIA method for non-traditional machining processes selection

    Directory of Open Access Journals (Sweden)

    Prasad Karande

    2012-10-01

    Full Text Available With ever increasing demand for manufactured products of hard alloys and metals with high surface finish and complex shape geometry, more interest is now being paid to non-traditional machining (NTM processes, where energy in its direct form is used to remove material from workpiece surface. Compared to conventional machining processes, NTM processes possess almost unlimited capabilities and there is a strong believe that use of NTM processes would go on increasing in diverse range of applications. Presence of a large number of NTM processes along with complex characteristics and capabilities, and lack of experts in NTM process selection domain compel for development of a structured approach for NTM process selection for a given machining application. Past researchers have already attempted to solve NTM process selection problems using various complex mathematical approaches which often require a profound knowledge in mathematics/artificial intelligence from the part of process engineers. In this paper, four NTM process selection problems are solved using an integrated PROMETHEE (preference ranking organization method for enrichment evaluation and GAIA (geometrical analysis for interactive aid method which would act as a visual decision aid to the process engineers. The observed results are quite satisfactory and exactly match with the expected solutions.

  9. Development of a test method for sowing machines concerning the drift of dust abrasion

    Directory of Open Access Journals (Sweden)

    Bahmer, Roland

    2014-02-01

    Full Text Available For a long time the seed treatment was regarded as the most effective and in terms of the impact of the natural environment as the safest form of plant protection. Since the serious damage of bees, caused by dust of abraded seed treatment in the Rhine Valley five years ago, the admission of seed treatment products containing insecticide is in the discussion. To evaluate the emission characteristics of sowing machines during sowing based on secure data, the technical basis for a test method for measuring the drift of abraded seed-dust in sowing machines were developed at the Centre for Agricultural Technology Augustenberg. An indoor test bench was created and a standardized test method by which it is possible to evaluate the drift behavior of sowing machines in comparison was developed. A granulate which is stained with a fluorescent Tracer is used as test seed. The „tracer technique“ allows a reproducible, rapid and inexpensive assessment of the drift behavior of the sowing technology, which is commonly used. To classify the obtained drift values in the test bench, measurements in the field were carried out for comparison. The determined drift volumes of those measurements were at a similar level as the measured values in the test stand. Therefore the standardized measurement of drift in the test stand is suitable for the calculation of exposure scenarios for the sowing of treated seeds.

  10. Survey of methods for integrated sequence analysis with emphasis on man-machine interaction

    Energy Technology Data Exchange (ETDEWEB)

    Kahlbom, U; Holmgren, P [RELCON, Stockholm (Sweden)

    1995-05-01

    This report presents a literature study concerning recently developed monotonic methodologies in the human reliability area. The work was performed by RELCON AB on commission by NKS/RAK-1, subproject 3. The topic of subproject 3 is `Integrated Sequence Analysis with Emphasis on Man-Machine Interaction`. The purpose with the study was to compile recently developed methodologies and to propose some of these methodologies for use in the sequence analysis task. The report describes mainly non-dynamic (monotonic) methodologies. One exception is HITLINE, which is a semi-dynamic method. Reference provides a summary of approaches to dynamic analysis of man-machine-interaction, and explains the differences between monotonic and dynamic methodologies. (au) 21 refs.

  11. Machine Learning methods in fitting first-principles total energies for substitutionally disordered solid

    Science.gov (United States)

    Gao, Qin; Yao, Sanxi; Widom, Michael

    2015-03-01

    Density functional theory (DFT) provides an accurate and first-principles description of solid structures and total energies. However, it is highly time-consuming to calculate structures with hundreds of atoms in the unit cell and almost not possible to calculate thousands of atoms. We apply and adapt machine learning algorithms, including compressive sensing, support vector regression and artificial neural networks to fit the DFT total energies of substitutionally disordered boron carbide. The nonparametric kernel method is also included in our models. Our fitted total energy model reproduces the DFT energies with prediction error of around 1 meV/atom. The assumptions of these machine learning models and applications of the fitted total energies will also be discussed. Financial support from McWilliams Fellowship and the ONR-MURI under the Grant No. N00014-11-1-0678 is gratefully acknowledged.

  12. Machine learning methods enable predictive modeling of antibody feature:function relationships in RV144 vaccinees.

    Science.gov (United States)

    Choi, Ickwon; Chung, Amy W; Suscovich, Todd J; Rerks-Ngarm, Supachai; Pitisuttithum, Punnee; Nitayaphan, Sorachai; Kaewkungwal, Jaranit; O'Connell, Robert J; Francis, Donald; Robb, Merlin L; Michael, Nelson L; Kim, Jerome H; Alter, Galit; Ackerman, Margaret E; Bailey-Kellogg, Chris

    2015-04-01

    The adaptive immune response to vaccination or infection can lead to the production of specific antibodies to neutralize the pathogen or recruit innate immune effector cells for help. The non-neutralizing role of antibodies in stimulating effector cell responses may have been a key mechanism of the protection observed in the RV144 HIV vaccine trial. In an extensive investigation of a rich set of data collected from RV144 vaccine recipients, we here employ machine learning methods to identify and model associations between antibody features (IgG subclass and antigen specificity) and effector function activities (antibody dependent cellular phagocytosis, cellular cytotoxicity, and cytokine release). We demonstrate via cross-validation that classification and regression approaches can effectively use the antibody features to robustly predict qualitative and quantitative functional outcomes. This integration of antibody feature and function data within a machine learning framework provides a new, objective approach to discovering and assessing multivariate immune correlates.

  13. Transducer-actuator systems and methods for performing on-machine measurements and automatic part alignment

    Science.gov (United States)

    Barkman, William E.; Dow, Thomas A.; Garrard, Kenneth P.; Marston, Zachary

    2016-07-12

    Systems and methods for performing on-machine measurements and automatic part alignment, including: a measurement component operable for determining the position of a part on a machine; and an actuation component operable for adjusting the position of the part by contacting the part with a predetermined force responsive to the determined position of the part. The measurement component consists of a transducer. The actuation component consists of a linear actuator. Optionally, the measurement component and the actuation component consist of a single linear actuator operable for contacting the part with a first lighter force for determining the position of the part and with a second harder force for adjusting the position of the part. The actuation component is utilized in a substantially horizontal configuration and the effects of gravitational drop of the part are accounted for in the force applied and the timing of the contact.

  14. Survey of methods for integrated sequence analysis with emphasis on man-machine interaction

    International Nuclear Information System (INIS)

    Kahlbom, U.; Holmgren, P.

    1995-05-01

    This report presents a literature study concerning recently developed monotonic methodologies in the human reliability area. The work was performed by RELCON AB on commission by NKS/RAK-1, subproject 3. The topic of subproject 3 is 'Integrated Sequence Analysis with Emphasis on Man-Machine Interaction'. The purpose with the study was to compile recently developed methodologies and to propose some of these methodologies for use in the sequence analysis task. The report describes mainly non-dynamic (monotonic) methodologies. One exception is HITLINE, which is a semi-dynamic method. Reference provides a summary of approaches to dynamic analysis of man-machine-interaction, and explains the differences between monotonic and dynamic methodologies. (au) 21 refs

  15. Machine learning methods enable predictive modeling of antibody feature:function relationships in RV144 vaccinees.

    Directory of Open Access Journals (Sweden)

    Ickwon Choi

    2015-04-01

    Full Text Available The adaptive immune response to vaccination or infection can lead to the production of specific antibodies to neutralize the pathogen or recruit innate immune effector cells for help. The non-neutralizing role of antibodies in stimulating effector cell responses may have been a key mechanism of the protection observed in the RV144 HIV vaccine trial. In an extensive investigation of a rich set of data collected from RV144 vaccine recipients, we here employ machine learning methods to identify and model associations between antibody features (IgG subclass and antigen specificity and effector function activities (antibody dependent cellular phagocytosis, cellular cytotoxicity, and cytokine release. We demonstrate via cross-validation that classification and regression approaches can effectively use the antibody features to robustly predict qualitative and quantitative functional outcomes. This integration of antibody feature and function data within a machine learning framework provides a new, objective approach to discovering and assessing multivariate immune correlates.

  16. Method for providing slip energy control in permanent magnet electrical machines

    Science.gov (United States)

    Hsu, John S.

    2006-11-14

    An electric machine (40) has a stator (43), a permanent magnet rotor (38) with permanent magnets (39) and a magnetic coupling uncluttered rotor (46) for inducing a slip energy current in secondary coils (47). A dc flux can be produced in the uncluttered rotor when the secondary coils are fed with dc currents. The magnetic coupling uncluttered rotor (46) has magnetic brushes (A, B, C, D) which couple flux in through the rotor (46) to the secondary coils (47c, 47d) without inducing a current in the rotor (46) and without coupling a stator rotational energy component to the secondary coils (47c, 47d). The machine can be operated as a motor or a generator in multi-phase or single-phase embodiments and is applicable to the hybrid electric vehicle. A method of providing a slip energy controller is also disclosed.

  17. Machine Learning Methods to Extract Documentation of Breast Cancer Symptoms From Electronic Health Records.

    Science.gov (United States)

    Forsyth, Alexander W; Barzilay, Regina; Hughes, Kevin S; Lui, Dickson; Lorenz, Karl A; Enzinger, Andrea; Tulsky, James A; Lindvall, Charlotta

    2018-02-27

    Clinicians document cancer patients' symptoms in free-text format within electronic health record visit notes. Although symptoms are critically important to quality of life and often herald clinical status changes, computational methods to assess the trajectory of symptoms over time are woefully underdeveloped. To create machine learning algorithms capable of extracting patient-reported symptoms from free-text electronic health record notes. The data set included 103,564 sentences obtained from the electronic clinical notes of 2695 breast cancer patients receiving paclitaxel-containing chemotherapy at two academic cancer centers between May 1996 and May 2015. We manually annotated 10,000 sentences and trained a conditional random field model to predict words indicating an active symptom (positive label), absence of a symptom (negative label), or no symptom at all (neutral label). Sentences labeled by human coder were divided into training, validation, and test data sets. Final model performance was determined on 20% test data unused in model development or tuning. The final model achieved precision of 0.82, 0.86, and 0.99 and recall of 0.56, 0.69, and 1.00 for positive, negative, and neutral symptom labels, respectively. The most common positive symptoms were pain, fatigue, and nausea. Machine-based labeling of 103,564 sentences took two minutes. We demonstrate the potential of machine learning to gather, track, and analyze symptoms experienced by cancer patients during chemotherapy. Although our initial model requires further optimization to improve the performance, further model building may yield machine learning methods suitable to be deployed in routine clinical care, quality improvement, and research applications. Copyright © 2018 American Academy of Hospice and Palliative Medicine. Published by Elsevier Inc. All rights reserved.

  18. Optimization of Coolant Technique Conditions for Machining A319 Aluminium Alloy Using Response Surface Method (RSM)

    Science.gov (United States)

    Zainal Ariffin, S.; Razlan, A.; Ali, M. Mohd; Efendee, A. M.; Rahman, M. M.

    2018-03-01

    Background/Objectives: The paper discusses about the optimum cutting parameters with coolant techniques condition (1.0 mm nozzle orifice, wet and dry) to optimize surface roughness, temperature and tool wear in the machining process based on the selected setting parameters. The selected cutting parameters for this study were the cutting speed, feed rate, depth of cut and coolant techniques condition. Methods/Statistical Analysis Experiments were conducted and investigated based on Design of Experiment (DOE) with Response Surface Method. The research of the aggressive machining process on aluminum alloy (A319) for automotive applications is an effort to understand the machining concept, which widely used in a variety of manufacturing industries especially in the automotive industry. Findings: The results show that the dominant failure mode is the surface roughness, temperature and tool wear when using 1.0 mm nozzle orifice, increases during machining and also can be alternative minimize built up edge of the A319. The exploration for surface roughness, productivity and the optimization of cutting speed in the technical and commercial aspects of the manufacturing processes of A319 are discussed in automotive components industries for further work Applications/Improvements: The research result also beneficial in minimizing the costs incurred and improving productivity of manufacturing firms. According to the mathematical model and equations, generated by CCD based RSM, experiments were performed and cutting coolant condition technique using size nozzle can reduces tool wear, surface roughness and temperature was obtained. Results have been analyzed and optimization has been carried out for selecting cutting parameters, shows that the effectiveness and efficiency of the system can be identified and helps to solve potential problems.

  19. A Machine Learning Regression scheme to design a FR-Image Quality Assessment Algorithm

    OpenAIRE

    Charrier , Christophe; Lezoray , Olivier; Lebrun , Gilles

    2012-01-01

    International audience; A crucial step in image compression is the evaluation of its performance, and more precisely available ways to measure the quality of compressed images. In this paper, a machine learning expert, providing a quality score is proposed. This quality measure is based on a learned classification process in order to respect that of human observers. The proposed method namely Machine Learning-based Image Quality Measurment (MLIQM) first classifies the quality using multi Supp...

  20. rFerns: An Implementation of the Random Ferns Method for General-Purpose Machine Learning

    Directory of Open Access Journals (Sweden)

    Miron B. Kursa

    2014-11-01

    Full Text Available Random ferns is a very simple yet powerful classification method originally introduced for specific computer vision tasks. In this paper, I show that this algorithm may be considered as a constrained decision tree ensemble and use this interpretation to introduce a series of modifications which enable the use of random ferns in general machine learning problems. Moreover, I extend the method with an internal error approximation and an attribute importance measure based on corresponding features of the random forest algorithm. I also present the R package rFerns containing an efficient implementation of this modified version of random ferns.

  1. Identifying Structural Flow Defects in Disordered Solids Using Machine-Learning Methods

    Science.gov (United States)

    Cubuk, E. D.; Schoenholz, S. S.; Rieser, J. M.; Malone, B. D.; Rottler, J.; Durian, D. J.; Kaxiras, E.; Liu, A. J.

    2015-03-01

    We use machine-learning methods on local structure to identify flow defects—or particles susceptible to rearrangement—in jammed and glassy systems. We apply this method successfully to two very different systems: a two-dimensional experimental realization of a granular pillar under compression and a Lennard-Jones glass in both two and three dimensions above and below its glass transition temperature. We also identify characteristics of flow defects that differentiate them from the rest of the sample. Our results show it is possible to discern subtle structural features responsible for heterogeneous dynamics observed across a broad range of disordered materials.

  2. Neutron–gamma discrimination based on the support vector machine method

    International Nuclear Information System (INIS)

    Yu, Xunzhen; Zhu, Jingjun; Lin, ShinTed; Wang, Li; Xing, Haoyang; Zhang, Caixun; Xia, Yuxi; Liu, Shukui; Yue, Qian; Wei, Weiwei; Du, Qiang; Tang, Changjian

    2015-01-01

    In this study, the combination of the support vector machine (SVM) method with the moment analysis method (MAM) is proposed and utilized to perform neutron/gamma (n/γ) discrimination of the pulses from an organic liquid scintillator (OLS). Neutron and gamma events, which can be firmly separated on the scatter plot drawn by the charge comparison method (CCM), are detected to form the training data set and the test data set for the SVM, and the MAM is used to create the feature vectors for individual events in the data sets. Compared to the traditional methods, such as CCM, the proposed method can not only discriminate the neutron and gamma signals, even at lower energy levels, but also provide the corresponding classification accuracy for each event, which is useful in validating the discrimination. Meanwhile, the proposed method can also offer a predication of the classification for the under-energy-limit events

  3. Can We Train Machine Learning Methods to Outperform the High-dimensional Propensity Score Algorithm?

    Science.gov (United States)

    Karim, Mohammad Ehsanul; Pang, Menglan; Platt, Robert W

    2018-03-01

    The use of retrospective health care claims datasets is frequently criticized for the lack of complete information on potential confounders. Utilizing patient's health status-related information from claims datasets as surrogates or proxies for mismeasured and unobserved confounders, the high-dimensional propensity score algorithm enables us to reduce bias. Using a previously published cohort study of postmyocardial infarction statin use (1998-2012), we compare the performance of the algorithm with a number of popular machine learning approaches for confounder selection in high-dimensional covariate spaces: random forest, least absolute shrinkage and selection operator, and elastic net. Our results suggest that, when the data analysis is done with epidemiologic principles in mind, machine learning methods perform as well as the high-dimensional propensity score algorithm. Using a plasmode framework that mimicked the empirical data, we also showed that a hybrid of machine learning and high-dimensional propensity score algorithms generally perform slightly better than both in terms of mean squared error, when a bias-based analysis is used.

  4. The reduction methods of operator's radiation dose for portable dental X-ray machines.

    Science.gov (United States)

    Cho, Jeong-Yeon; Han, Won-Jeong

    2012-08-01

    This study was aimed to investigate the methods to reduce operator's radiation dose when taking intraoral radiographs with portable dental X-ray machines. Two kinds of portable dental X-ray machines (DX3000, Dexcowin and Rextar, Posdion) were used. Operator's radiation dose was measured with an 1,800 cc ionization chamber (RadCal Corp.) at the hand level of X-ray tubehead and at the operator's chest and waist levels with and without the backscatter shield. The operator's radiation dose at the hand level was measured with and without lead gloves and with long and short cones. The backscatter shield reduced operator's radiation dose at the hand level of X-ray tubehead to 23 - 32%, the lead gloves to 26 - 31%, and long cone to 48 - 52%. And the backscatter shield reduced operator's radiation dose at the operator's chest and waist levels to 0.1 - 37%. When portable dental X-ray systems are used, it is recommended to select X-ray machine attached with a backscatter shield and a long cone and to wear the lead gloves.

  5. Modulation transfer function (MTF) measurement method based on support vector machine (SVM)

    Science.gov (United States)

    Zhang, Zheng; Chen, Yueting; Feng, Huajun; Xu, Zhihai; Li, Qi

    2016-03-01

    An imaging system's spatial quality can be expressed by the system's modulation spread function (MTF) as a function of spatial frequency in terms of the linear response theory. Methods have been proposed to assess the MTF of an imaging system using point, slit or edge techniques. The edge method is widely used for the low requirement of targets. However, the traditional edge methods are limited by the edge angle. Besides, image noise will impair the measurement accuracy, making the measurement result unstable. In this paper, a novel measurement method based on the support vector machine (SVM) is proposed. Image patches with different edge angles and MTF levels are generated as the training set. Parameters related with MTF and image structure are extracted from the edge images. Trained with image parameters and the corresponding MTF, the SVM classifier can assess the MTF of any edge image. The result shows that the proposed method has an excellent performance on measuring accuracy and stability.

  6. Electricity of machine tool

    International Nuclear Information System (INIS)

    Gijeon media editorial department

    1977-10-01

    This book is divided into three parts. The first part deals with electricity machine, which can taints from generator to motor, motor a power source of machine tool, electricity machine for machine tool such as switch in main circuit, automatic machine, a knife switch and pushing button, snap switch, protection device, timer, solenoid, and rectifier. The second part handles wiring diagram. This concludes basic electricity circuit of machine tool, electricity wiring diagram in your machine like milling machine, planer and grinding machine. The third part introduces fault diagnosis of machine, which gives the practical solution according to fault diagnosis and the diagnostic method with voltage and resistance measurement by tester.

  7. Comparison of two different methods for the uncertainty estimation of circle diameter measurements using an optical coordinate measuring machine

    DEFF Research Database (Denmark)

    Morace, Renata Erica; Hansen, Hans Nørgaard; De Chiffre, Leonardo

    2005-01-01

    This paper deals with the uncertainty estimation of measurements performed on optical coordinate measuring machines (CMMs). Two different methods were used to assess the uncertainty of circle diameter measurements using an optical CMM: the sensitivity analysis developing an uncertainty budget...

  8. Machine learning and statistical methods for the prediction of maximal oxygen uptake: recent advances.

    Science.gov (United States)

    Abut, Fatih; Akay, Mehmet Fatih

    2015-01-01

    Maximal oxygen uptake (VO2max) indicates how many milliliters of oxygen the body can consume in a state of intense exercise per minute. VO2max plays an important role in both sport and medical sciences for different purposes, such as indicating the endurance capacity of athletes or serving as a metric in estimating the disease risk of a person. In general, the direct measurement of VO2max provides the most accurate assessment of aerobic power. However, despite a high level of accuracy, practical limitations associated with the direct measurement of VO2max, such as the requirement of expensive and sophisticated laboratory equipment or trained staff, have led to the development of various regression models for predicting VO2max. Consequently, a lot of studies have been conducted in the last years to predict VO2max of various target audiences, ranging from soccer athletes, nonexpert swimmers, cross-country skiers to healthy-fit adults, teenagers, and children. Numerous prediction models have been developed using different sets of predictor variables and a variety of machine learning and statistical methods, including support vector machine, multilayer perceptron, general regression neural network, and multiple linear regression. The purpose of this study is to give a detailed overview about the data-driven modeling studies for the prediction of VO2max conducted in recent years and to compare the performance of various VO2max prediction models reported in related literature in terms of two well-known metrics, namely, multiple correlation coefficient (R) and standard error of estimate. The survey results reveal that with respect to regression methods used to develop prediction models, support vector machine, in general, shows better performance than other methods, whereas multiple linear regression exhibits the worst performance.

  9. Less is more: regularization perspectives on large scale machine learning

    CERN Multimedia

    CERN. Geneva

    2017-01-01

    Deep learning based techniques provide a possible solution at the expanse of theoretical guidance and, especially, of computational requirements. It is then a key challenge for large scale machine learning to devise approaches guaranteed to be accurate and yet computationally efficient. In this talk, we will consider a regularization perspectives on machine learning appealing to classical ideas in linear algebra and inverse problems to scale-up dramatically nonparametric methods such as kernel methods, often dismissed because of prohibitive costs. Our analysis derives optimal theoretical guarantees while providing experimental results at par or out-performing state of the art approaches.

  10. Active damage detection method based on support vector machine and impulse response

    International Nuclear Information System (INIS)

    Taniguchi, Ryuta; Mita, Akira

    2004-01-01

    An active damage detection method was proposed to characterize damage in bolted joints. The purpose of this study is to propose a damage detection method that can obtain the detailed information of the damage by creating feature vectors for pattern recognition. In the proposed method, the wavelet transform is applied to the sensor signals, and the feature vectors are defined by second power average of the amplitude. The feature vectors generated by experiments were successfully used as the training data for Support Vector Machine (SVM). By applying the wavelet transform to time-frequency analysis, the accuracy of pattern recognition was raised in both correlation coefficient and SVM applications. Moreover, the SVM could identify the damage with very strong discernment capability than others. Applicability of the proposed method was successfully demonstrated. (author)

  11. Detection of License Plate using Sliding Window, Histogram of Oriented Gradient, and Support Vector Machines Method

    Science.gov (United States)

    Astawa, INGA; Gusti Ngurah Bagus Caturbawa, I.; Made Sajayasa, I.; Dwi Suta Atmaja, I. Made Ari

    2018-01-01

    The license plate recognition usually used as part of system such as parking system. License plate detection considered as the most important step in the license plate recognition system. We propose methods that can be used to detect the vehicle plate on mobile phone. In this paper, we used Sliding Window, Histogram of Oriented Gradient (HOG), and Support Vector Machines (SVM) method to license plate detection so it will increase the detection level even though the image is not in a good quality. The image proceed by Sliding Window method in order to find plate position. Feature extraction in every window movement had been done by HOG and SVM method. Good result had shown in this research, which is 96% of accuracy.

  12. Energy-efficient algorithm for classification of states of wireless sensor network using machine learning methods

    Science.gov (United States)

    Yuldashev, M. N.; Vlasov, A. I.; Novikov, A. N.

    2018-05-01

    This paper focuses on the development of an energy-efficient algorithm for classification of states of a wireless sensor network using machine learning methods. The proposed algorithm reduces energy consumption by: 1) elimination of monitoring of parameters that do not affect the state of the sensor network, 2) reduction of communication sessions over the network (the data are transmitted only if their values can affect the state of the sensor network). The studies of the proposed algorithm have shown that at classification accuracy close to 100%, the number of communication sessions can be reduced by 80%.

  13. A method for classification of network traffic based on C5.0 Machine Learning Algorithm

    DEFF Research Database (Denmark)

    Bujlow, Tomasz; Riaz, M. Tahir; Pedersen, Jens Myrup

    2012-01-01

    current network traffic. To overcome the drawbacks of existing methods for traffic classification, usage of C5.0 Machine Learning Algorithm (MLA) was proposed. On the basis of statistical traffic information received from volunteers and C5.0 algorithm we constructed a boosted classifier, which was shown...... and classification, an algorithm for recognizing flow direction and the C5.0 itself. Classified applications include Skype, FTP, torrent, web browser traffic, web radio, interactive gaming and SSH. We performed subsequent tries using different sets of parameters and both training and classification options...

  14. MU-LOC: A Machine-Learning Method for Predicting Mitochondrially Localized Proteins in Plants

    DEFF Research Database (Denmark)

    Zhang, Ning; Rao, R Shyama Prasad; Salvato, Fernanda

    2018-01-01

    -sequence or a multitude of internal signals. Compared with experimental approaches, computational predictions provide an efficient way to infer subcellular localization of a protein. However, it is still challenging to predict plant mitochondrially localized proteins accurately due to various limitations. Consequently......, the performance of current tools can be improved with new data and new machine-learning methods. We present MU-LOC, a novel computational approach for large-scale prediction of plant mitochondrial proteins. We collected a comprehensive dataset of plant subcellular localization, extracted features including amino...

  15. A Shellcode Detection Method Based on Full Native API Sequence and Support Vector Machine

    Science.gov (United States)

    Cheng, Yixuan; Fan, Wenqing; Huang, Wei; An, Jing

    2017-09-01

    Dynamic monitoring the behavior of a program is widely used to discriminate between benign program and malware. It is usually based on the dynamic characteristics of a program, such as API call sequence or API call frequency to judge. The key innovation of this paper is to consider the full Native API sequence and use the support vector machine to detect the shellcode. We also use the Markov chain to extract and digitize Native API sequence features. Our experimental results show that the method proposed in this paper has high accuracy and low detection rate.

  16. BENCHMARK OF MACHINE LEARNING METHODS FOR CLASSIFICATION OF A SENTINEL-2 IMAGE

    Directory of Open Access Journals (Sweden)

    F. Pirotti

    2016-06-01

    Full Text Available Thanks to mainly ESA and USGS, a large bulk of free images of the Earth is readily available nowadays. One of the main goals of remote sensing is to label images according to a set of semantic categories, i.e. image classification. This is a very challenging issue since land cover of a specific class may present a large spatial and spectral variability and objects may appear at different scales and orientations. In this study, we report the results of benchmarking 9 machine learning algorithms tested for accuracy and speed in training and classification of land-cover classes in a Sentinel-2 dataset. The following machine learning methods (MLM have been tested: linear discriminant analysis, k-nearest neighbour, random forests, support vector machines, multi layered perceptron, multi layered perceptron ensemble, ctree, boosting, logarithmic regression. The validation is carried out using a control dataset which consists of an independent classification in 11 land-cover classes of an area about 60 km2, obtained by manual visual interpretation of high resolution images (20 cm ground sampling distance by experts. In this study five out of the eleven classes are used since the others have too few samples (pixels for testing and validating subsets. The classes used are the following: (i urban (ii sowable areas (iii water (iv tree plantations (v grasslands. Validation is carried out using three different approaches: (i using pixels from the training dataset (train, (ii using pixels from the training dataset and applying cross-validation with the k-fold method (kfold and (iii using all pixels from the control dataset. Five accuracy indices are calculated for the comparison between the values predicted with each model and control values over three sets of data: the training dataset (train, the whole control dataset (full and with k-fold cross-validation (kfold with ten folds. Results from validation of predictions of the whole dataset (full show the

  17. Machine learning methods for credibility assessment of interviewees based on posturographic data.

    Science.gov (United States)

    Saripalle, Sashi K; Vemulapalli, Spandana; King, Gregory W; Burgoon, Judee K; Derakhshani, Reza

    2015-01-01

    This paper discusses the advantages of using posturographic signals from force plates for non-invasive credibility assessment. The contributions of our work are two fold: first, the proposed method is highly efficient and non invasive. Second, feasibility for creating an autonomous credibility assessment system using machine-learning algorithms is studied. This study employs an interview paradigm that includes subjects responding with truthful and deceptive intent while their center of pressure (COP) signal is being recorded. Classification models utilizing sets of COP features for deceptive responses are derived and best accuracy of 93.5% for test interval is reported.

  18. PMSVM: An Optimized Support Vector Machine Classification Algorithm Based on PCA and Multilevel Grid Search Methods

    Directory of Open Access Journals (Sweden)

    Yukai Yao

    2015-01-01

    Full Text Available We propose an optimized Support Vector Machine classifier, named PMSVM, in which System Normalization, PCA, and Multilevel Grid Search methods are comprehensively considered for data preprocessing and parameters optimization, respectively. The main goals of this study are to improve the classification efficiency and accuracy of SVM. Sensitivity, Specificity, Precision, and ROC curve, and so forth, are adopted to appraise the performances of PMSVM. Experimental results show that PMSVM has relatively better accuracy and remarkable higher efficiency compared with traditional SVM algorithms.

  19. In Silico Prediction of Chemicals Binding to Aromatase with Machine Learning Methods.

    Science.gov (United States)

    Du, Hanwen; Cai, Yingchun; Yang, Hongbin; Zhang, Hongxiao; Xue, Yuhan; Liu, Guixia; Tang, Yun; Li, Weihua

    2017-05-15

    Environmental chemicals may affect endocrine systems through multiple mechanisms, one of which is via effects on aromatase (also known as CYP19A1), an enzyme critical for maintaining the normal balance of estrogens and androgens in the body. Therefore, rapid and efficient identification of aromatase-related endocrine disrupting chemicals (EDCs) is important for toxicology and environment risk assessment. In this study, on the basis of the Tox21 10K compound library, in silico classification models for predicting aromatase binders/nonbinders were constructed by machine learning methods. To improve the prediction ability of the models, a combined classifier (CC) strategy that combines different independent machine learning methods was adopted. Performances of the models were measured by test and external validation sets containing 1336 and 216 chemicals, respectively. The best model was obtained with the MACCS (Molecular Access System) fingerprint and CC method, which exhibited an accuracy of 0.84 for the test set and 0.91 for the external validation set. Additionally, several representative substructures for characterizing aromatase binders, such as ketone, lactone, and nitrogen-containing derivatives, were identified using information gain and substructure frequency analysis. Our study provided a systematic assessment of chemicals binding to aromatase. The built models can be helpful to rapidly identify potential EDCs targeting aromatase.

  20. An Overview and Evaluation of Recent Machine Learning Imputation Methods Using Cardiac Imaging Data.

    Science.gov (United States)

    Liu, Yuzhe; Gopalakrishnan, Vanathi

    2017-03-01

    Many clinical research datasets have a large percentage of missing values that directly impacts their usefulness in yielding high accuracy classifiers when used for training in supervised machine learning. While missing value imputation methods have been shown to work well with smaller percentages of missing values, their ability to impute sparse clinical research data can be problem specific. We previously attempted to learn quantitative guidelines for ordering cardiac magnetic resonance imaging during the evaluation for pediatric cardiomyopathy, but missing data significantly reduced our usable sample size. In this work, we sought to determine if increasing the usable sample size through imputation would allow us to learn better guidelines. We first review several machine learning methods for estimating missing data. Then, we apply four popular methods (mean imputation, decision tree, k-nearest neighbors, and self-organizing maps) to a clinical research dataset of pediatric patients undergoing evaluation for cardiomyopathy. Using Bayesian Rule Learning (BRL) to learn ruleset models, we compared the performance of imputation-augmented models versus unaugmented models. We found that all four imputation-augmented models performed similarly to unaugmented models. While imputation did not improve performance, it did provide evidence for the robustness of our learned models.

  1. Process signal selection method to improve the impact mitigation of sensor broken for diagnosis using machine learning

    International Nuclear Information System (INIS)

    Minowa, Hirotsugu; Gofuku, Akio

    2014-01-01

    Accidents of industrial plants cause large loss on human, economic, social credibility. In recent, studies of diagnostic methods using techniques of machine learning are expected to detect early and correctly abnormality occurred in a plant. However, the general diagnostic machines are generated generally to require all process signals (hereafter, signals) for plant diagnosis. Thus if trouble occurs such as process sensor is broken, the diagnostic machine cannot diagnose or may decrease diagnostic performance. Therefore, we propose an important process signal selection method to improve impact mitigation without reducing the diagnostic performance by reducing the adverse effect of noises on multi-agent diagnostic system. The advantage of our method is the general-purpose property that allows to be applied to various supervised machine learning and to set the various parameters to decide termination of search. The experiment evaluation revealed that diagnostic machines generated by our method using SVM improved the impact mitigation and did not reduce performance about the diagnostic accuracy, the velocity of diagnosis, predictions of plant state near accident occurrence, in comparison with the basic diagnostic machine which diagnoses by using all signals. This paper reports our proposed method and the results evaluated which our method was applied to the simulated abnormal of the fast-breeder reactor Monju. (author)

  2. Asset Analysis Method for the Cyber Security of Man Machine Interface System

    Energy Technology Data Exchange (ETDEWEB)

    Kang, Sung Kon; Kim, Hun Hee; Shin, Yeong Cheol [Korea Hydro and Nuclear Power, Daejeon (Korea, Republic of)

    2010-10-15

    As digital MMIS (Man Machine Interface System) is applied in Nuclear Power Plant (NPP), cyber security is becoming more and more important. Regulatory guide (KINS/GT-N27) requires that implementation plan for cyber security be prepared in NPP. Regulatory guide recommends the following 4 processes: 1) an asset analysis of MMIS, 2) a vulnerability analysis of MMIS, 3) establishment of countermeasures, and 4) establishment of operational guideline for cyber security. Conventional method for the asset analysis is mainly performed with a table form for each asset. Conventional method requires a lot of efforts due to the duplication of information. This paper presents an asset analysis method using object oriented approach for the NPP

  3. Investigation of Unbalanced Magnetic Force in Magnetic Geared Machine Using Analytical Methods

    DEFF Research Database (Denmark)

    Zhang, Xiaoxu; Liu, Xiao; Chen, Zhe

    2016-01-01

    The electromagnetic structure of the magnetic geared machine (MGM) may induce a significant unbalanced magnetic force (UMF). However, few methods have been developed to theoretically reveal the essential reasons for this issue in the MGM. In this paper, an analytical method based on an air....... Second, the magnetic field distribution in the MGM is modeled by an exact subdomain method, which allows the magnetic forces to be calculated quantitatively. The magnetic forces in two MGMs are then studied under no-load and full-load conditions. Finally, the finite-element calculation confirms......-gap relative permeance theory is first developed to qualitatively study the origins of the UMF in the MGM. By means of formula derivations, three kinds of magnetic field behaviors in the air gaps are found to be the potential sources of UMF. It is also proved that the UMF is possible to avoid by design choices...

  4. Asset Analysis Method for the Cyber Security of Man Machine Interface System

    International Nuclear Information System (INIS)

    Kang, Sung Kon; Kim, Hun Hee; Shin, Yeong Cheol

    2010-01-01

    As digital MMIS (Man Machine Interface System) is applied in Nuclear Power Plant (NPP), cyber security is becoming more and more important. Regulatory guide (KINS/GT-N27) requires that implementation plan for cyber security be prepared in NPP. Regulatory guide recommends the following 4 processes: 1) an asset analysis of MMIS, 2) a vulnerability analysis of MMIS, 3) establishment of countermeasures, and 4) establishment of operational guideline for cyber security. Conventional method for the asset analysis is mainly performed with a table form for each asset. Conventional method requires a lot of efforts due to the duplication of information. This paper presents an asset analysis method using object oriented approach for the NPP

  5. Nonplanar machines

    International Nuclear Information System (INIS)

    Ritson, D.

    1989-05-01

    This talk examines methods available to minimize, but never entirely eliminate, degradation of machine performance caused by terrain following. Breaking of planar machine symmetry for engineering convenience and/or monetary savings must be balanced against small performance degradation, and can only be decided on a case-by-case basis. 5 refs

  6. Machine terms dictionary

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1979-04-15

    This book gives descriptions of machine terms which includes machine design, drawing, the method of machine, machine tools, machine materials, automobile, measuring and controlling, electricity, basic of electron, information technology, quality assurance, Auto CAD and FA terms and important formula of mechanical engineering.

  7. Tracking-by-detection of surgical instruments in minimally invasive surgery via the convolutional neural network deep learning-based method.

    Science.gov (United States)

    Zhao, Zijian; Voros, Sandrine; Weng, Ying; Chang, Faliang; Li, Ruijian

    2017-12-01

    Worldwide propagation of minimally invasive surgeries (MIS) is hindered by their drawback of indirect observation and manipulation, while monitoring of surgical instruments moving in the operated body required by surgeons is a challenging problem. Tracking of surgical instruments by vision-based methods is quite lucrative, due to its flexible implementation via software-based control with no need to modify instruments or surgical workflow. A MIS instrument is conventionally split into a shaft and end-effector portions, while a 2D/3D tracking-by-detection framework is proposed, which performs the shaft tracking followed by the end-effector one. The former portion is described by line features via the RANSAC scheme, while the latter is depicted by special image features based on deep learning through a well-trained convolutional neural network. The method verification in 2D and 3D formulation is performed through the experiments on ex-vivo video sequences, while qualitative validation on in-vivo video sequences is obtained. The proposed method provides robust and accurate tracking, which is confirmed by the experimental results: its 3D performance in ex-vivo video sequences exceeds those of the available state-of -the-art methods. Moreover, the experiments on in-vivo sequences demonstrate that the proposed method can tackle the difficult condition of tracking with unknown camera parameters. Further refinements of the method will refer to the occlusion and multi-instrumental MIS applications.

  8. Trip Travel Time Forecasting Based on Selective Forgetting Extreme Learning Machine

    Directory of Open Access Journals (Sweden)

    Zhiming Gui

    2014-01-01

    Full Text Available Travel time estimation on road networks is a valuable traffic metric. In this paper, we propose a machine learning based method for trip travel time estimation in road networks. The method uses the historical trip information extracted from taxis trace data as the training data. An optimized online sequential extreme machine, selective forgetting extreme learning machine, is adopted to make the prediction. Its selective forgetting learning ability enables the prediction algorithm to adapt to trip conditions changes well. Experimental results using real-life taxis trace data show that the forecasting model provides an effective and practical way for the travel time forecasting.

  9. Comparison of four statistical and machine learning methods for crash severity prediction.

    Science.gov (United States)

    Iranitalab, Amirfarrokh; Khattak, Aemal

    2017-11-01

    Crash severity prediction models enable different agencies to predict the severity of a reported crash with unknown severity or the severity of crashes that may be expected to occur sometime in the future. This paper had three main objectives: comparison of the performance of four statistical and machine learning methods including Multinomial Logit (MNL), Nearest Neighbor Classification (NNC), Support Vector Machines (SVM) and Random Forests (RF), in predicting traffic crash severity; developing a crash costs-based approach for comparison of crash severity prediction methods; and investigating the effects of data clustering methods comprising K-means Clustering (KC) and Latent Class Clustering (LCC), on the performance of crash severity prediction models. The 2012-2015 reported crash data from Nebraska, United States was obtained and two-vehicle crashes were extracted as the analysis data. The dataset was split into training/estimation (2012-2014) and validation (2015) subsets. The four prediction methods were trained/estimated using the training/estimation dataset and the correct prediction rates for each crash severity level, overall correct prediction rate and a proposed crash costs-based accuracy measure were obtained for the validation dataset. The correct prediction rates and the proposed approach showed NNC had the best prediction performance in overall and in more severe crashes. RF and SVM had the next two sufficient performances and MNL was the weakest method. Data clustering did not affect the prediction results of SVM, but KC improved the prediction performance of MNL, NNC and RF, while LCC caused improvement in MNL and RF but weakened the performance of NNC. Overall correct prediction rate had almost the exact opposite results compared to the proposed approach, showing that neglecting the crash costs can lead to misjudgment in choosing the right prediction method. Copyright © 2017 Elsevier Ltd. All rights reserved.

  10. Peak detection method evaluation for ion mobility spectrometry by using machine learning approaches.

    Science.gov (United States)

    Hauschild, Anne-Christin; Kopczynski, Dominik; D'Addario, Marianna; Baumbach, Jörg Ingo; Rahmann, Sven; Baumbach, Jan

    2013-04-16

    Ion mobility spectrometry with pre-separation by multi-capillary columns (MCC/IMS) has become an established inexpensive, non-invasive bioanalytics technology for detecting volatile organic compounds (VOCs) with various metabolomics applications in medical research. To pave the way for this technology towards daily usage in medical practice, different steps still have to be taken. With respect to modern biomarker research, one of the most important tasks is the automatic classification of patient-specific data sets into different groups, healthy or not, for instance. Although sophisticated machine learning methods exist, an inevitable preprocessing step is reliable and robust peak detection without manual intervention. In this work we evaluate four state-of-the-art approaches for automated IMS-based peak detection: local maxima search, watershed transformation with IPHEx, region-merging with VisualNow, and peak model estimation (PME).We manually generated Metabolites 2013, 3 278 a gold standard with the aid of a domain expert (manual) and compare the performance of the four peak calling methods with respect to two distinct criteria. We first utilize established machine learning methods and systematically study their classification performance based on the four peak detectors' results. Second, we investigate the classification variance and robustness regarding perturbation and overfitting. Our main finding is that the power of the classification accuracy is almost equally good for all methods, the manually created gold standard as well as the four automatic peak finding methods. In addition, we note that all tools, manual and automatic, are similarly robust against perturbations. However, the classification performance is more robust against overfitting when using the PME as peak calling preprocessor. In summary, we conclude that all methods, though small differences exist, are largely reliable and enable a wide spectrum of real-world biomedical applications.

  11. Effect of abiotic and biotic stress factors analysis using machine learning methods in zebrafish.

    Science.gov (United States)

    Gutha, Rajasekar; Yarrappagaari, Suresh; Thopireddy, Lavanya; Reddy, Kesireddy Sathyavelu; Saddala, Rajeswara Reddy

    2018-03-01

    In order to understand the mechanisms underlying stress responses, meta-analysis of transcriptome is made to identify differentially expressed genes (DEGs) and their biological, molecular and cellular mechanisms in response to stressors. The present study is aimed at identifying the effect of abiotic and biotic stress factors, and it is found that several stress responsive genes are common for both abiotic and biotic stress factors in zebrafish. The meta-analysis of micro-array studies revealed that almost 4.7% i.e., 108 common DEGs are differentially regulated between abiotic and biotic stresses. This shows that there is a global coordination and fine-tuning of gene regulation in response to these two types of challenges. We also performed dimension reduction methods, principal component analysis, and partial least squares discriminant analysis which are able to segregate abiotic and biotic stresses into separate entities. The supervised machine learning model, recursive-support vector machine, could classify abiotic and biotic stresses with 100% accuracy using a subset of DEGs. Beside these methods, the random forests decision tree model classified five out of 8 stress conditions with high accuracy. Finally, Functional enrichment analysis revealed the different gene ontology terms, transcription factors and miRNAs factors in the regulation of stress responses. Copyright © 2017 Elsevier Inc. All rights reserved.

  12. Automatic Detection of Acromegaly From Facial Photographs Using Machine Learning Methods.

    Science.gov (United States)

    Kong, Xiangyi; Gong, Shun; Su, Lijuan; Howard, Newton; Kong, Yanguo

    2018-01-01

    Automatic early detection of acromegaly is theoretically possible from facial photographs, which can lessen the prevalence and increase the cure probability. In this study, several popular machine learning algorithms were used to train a retrospective development dataset consisting of 527 acromegaly patients and 596 normal subjects. We firstly used OpenCV to detect the face bounding rectangle box, and then cropped and resized it to the same pixel dimensions. From the detected faces, locations of facial landmarks which were the potential clinical indicators were extracted. Frontalization was then adopted to synthesize frontal facing views to improve the performance. Several popular machine learning methods including LM, KNN, SVM, RT, CNN, and EM were used to automatically identify acromegaly from the detected facial photographs, extracted facial landmarks, and synthesized frontal faces. The trained models were evaluated using a separate dataset, of which half were diagnosed as acromegaly by growth hormone suppression test. The best result of our proposed methods showed a PPV of 96%, a NPV of 95%, a sensitivity of 96% and a specificity of 96%. Artificial intelligence can automatically early detect acromegaly with a high sensitivity and specificity. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

  13. Advances in industrial biopharmaceutical batch process monitoring: Machine-learning methods for small data problems.

    Science.gov (United States)

    Tulsyan, Aditya; Garvin, Christopher; Ündey, Cenk

    2018-04-06

    Biopharmaceutical manufacturing comprises of multiple distinct processing steps that require effective and efficient monitoring of many variables simultaneously in real-time. The state-of-the-art real-time multivariate statistical batch process monitoring (BPM) platforms have been in use in recent years to ensure comprehensive monitoring is in place as a complementary tool for continued process verification to detect weak signals. This article addresses a longstanding, industry-wide problem in BPM, referred to as the "Low-N" problem, wherein a product has a limited production history. The current best industrial practice to address the Low-N problem is to switch from a multivariate to a univariate BPM, until sufficient product history is available to build and deploy a multivariate BPM platform. Every batch run without a robust multivariate BPM platform poses risk of not detecting potential weak signals developing in the process that might have an impact on process and product performance. In this article, we propose an approach to solve the Low-N problem by generating an arbitrarily large number of in silico batches through a combination of hardware exploitation and machine-learning methods. To the best of authors' knowledge, this is the first article to provide a solution to the Low-N problem in biopharmaceutical manufacturing using machine-learning methods. Several industrial case studies from bulk drug substance manufacturing are presented to demonstrate the efficacy of the proposed approach for BPM under various Low-N scenarios. © 2018 Wiley Periodicals, Inc.

  14. BacHbpred: Support Vector Machine Methods for the Prediction of Bacterial Hemoglobin-Like Proteins

    Directory of Open Access Journals (Sweden)

    MuthuKrishnan Selvaraj

    2016-01-01

    Full Text Available The recent upsurge in microbial genome data has revealed that hemoglobin-like (HbL proteins may be widely distributed among bacteria and that some organisms may carry more than one HbL encoding gene. However, the discovery of HbL proteins has been limited to a small number of bacteria only. This study describes the prediction of HbL proteins and their domain classification using a machine learning approach. Support vector machine (SVM models were developed for predicting HbL proteins based upon amino acid composition (AC, dipeptide composition (DC, hybrid method (AC + DC, and position specific scoring matrix (PSSM. In addition, we introduce for the first time a new prediction method based on max to min amino acid residue (MM profiles. The average accuracy, standard deviation (SD, false positive rate (FPR, confusion matrix, and receiver operating characteristic (ROC were analyzed. We also compared the performance of our proposed models in homology detection databases. The performance of the different approaches was estimated using fivefold cross-validation techniques. Prediction accuracy was further investigated through confusion matrix and ROC curve analysis. All experimental results indicate that the proposed BacHbpred can be a perspective predictor for determination of HbL related proteins. BacHbpred, a web tool, has been developed for HbL prediction.

  15. Kernel machine methods for integrative analysis of genome-wide methylation and genotyping studies.

    Science.gov (United States)

    Zhao, Ni; Zhan, Xiang; Huang, Yen-Tsung; Almli, Lynn M; Smith, Alicia; Epstein, Michael P; Conneely, Karen; Wu, Michael C

    2018-03-01

    Many large GWAS consortia are expanding to simultaneously examine the joint role of DNA methylation in addition to genotype in the same subjects. However, integrating information from both data types is challenging. In this paper, we propose a composite kernel machine regression model to test the joint epigenetic and genetic effect. Our approach works at the gene level, which allows for a common unit of analysis across different data types. The model compares the pairwise similarities in the phenotype to the pairwise similarities in the genotype and methylation values; and high correspondence is suggestive of association. A composite kernel is constructed to measure the similarities in the genotype and methylation values between pairs of samples. We demonstrate through simulations and real data applications that the proposed approach can correctly control type I error, and is more robust and powerful than using only the genotype or methylation data in detecting trait-associated genes. We applied our method to investigate the genetic and epigenetic regulation of gene expression in response to stressful life events using data that are collected from the Grady Trauma Project. Within the kernel machine testing framework, our methods allow for heterogeneity in effect sizes, nonlinear, and interactive effects, as well as rapid P-value computation. © 2017 WILEY PERIODICALS, INC.

  16. Methods and means for the in-house training of mining machine operators

    Directory of Open Access Journals (Sweden)

    Velikanov Vladimir

    2017-01-01

    Full Text Available This study investigates the quality issue of the in-house training process for mining machine operators. The authors prove the urgency of the designated problem. The changes in modern society, as well as the development of science and technology have a direct impact on the vocational education system. This paper describes the main aspects of the in-house training process of mining machine operators; define the essence, structure, contents, and main directions of its revitalization. The following solutions are proposed in order to improve the quality of the in-house training process: to use the original method based on a rating system of the operator knowledge evaluation, active and interactive forms of using modern training technologies. The authors conducted testing techniques in mining enterprises with the aim of confirming the adequacy of the suggested approaches. The results are given in the work. It was proposed that the methods and tools integration has a positive impact on professional training system.

  17. Support vector machine-based facial-expression recognition method combining shape and appearance

    Science.gov (United States)

    Han, Eun Jung; Kang, Byung Jun; Park, Kang Ryoung; Lee, Sangyoun

    2010-11-01

    Facial expression recognition can be widely used for various applications, such as emotion-based human-machine interaction, intelligent robot interfaces, face recognition robust to expression variation, etc. Previous studies have been classified as either shape- or appearance-based recognition. The shape-based method has the disadvantage that the individual variance of facial feature points exists irrespective of similar expressions, which can cause a reduction of the recognition accuracy. The appearance-based method has a limitation in that the textural information of the face is very sensitive to variations in illumination. To overcome these problems, a new facial-expression recognition method is proposed, which combines both shape and appearance information, based on the support vector machine (SVM). This research is novel in the following three ways as compared to previous works. First, the facial feature points are automatically detected by using an active appearance model. From these, the shape-based recognition is performed by using the ratios between the facial feature points based on the facial-action coding system. Second, the SVM, which is trained to recognize the same and different expression classes, is proposed to combine two matching scores obtained from the shape- and appearance-based recognitions. Finally, a single SVM is trained to discriminate four different expressions, such as neutral, a smile, anger, and a scream. By determining the expression of the input facial image whose SVM output is at a minimum, the accuracy of the expression recognition is much enhanced. The experimental results showed that the recognition accuracy of the proposed method was better than previous researches and other fusion methods.

  18. Development of a Moodle Course for Schoolchildren's Table Tennis Learning Based on Competence Motivation Theory: Its Effectiveness in Comparison to Traditional Training Method

    Science.gov (United States)

    Zou, Junhua; Liu, Qingtang; Yang, Zongkai

    2012-01-01

    Based on Competence Motivation Theory (CMT), a Moodle course for schoolchildren's table tennis learning was developed (The URL is http://www.bssepp.com, and this course allows guest access). The effects of the course on students' knowledge, perceived competence and interest were evaluated through quantitative methods. The sample of the study…

  19. Predictive Power of Machine Learning for Optimizing Solar Water Heater Performance: The Potential Application of High-Throughput Screening

    Directory of Open Access Journals (Sweden)

    Hao Li

    2017-01-01

    Full Text Available Predicting the performance of solar water heater (SWH is challenging due to the complexity of the system. Fortunately, knowledge-based machine learning can provide a fast and precise prediction method for SWH performance. With the predictive power of machine learning models, we can further solve a more challenging question: how to cost-effectively design a high-performance SWH? Here, we summarize our recent studies and propose a general framework of SWH design using a machine learning-based high-throughput screening (HTS method. Design of water-in-glass evacuated tube solar water heater (WGET-SWH is selected as a case study to show the potential application of machine learning-based HTS to the design and optimization of solar energy systems.

  20. Comparison of four machine learning methods for object-oriented change detection in high-resolution satellite imagery

    Science.gov (United States)

    Bai, Ting; Sun, Kaimin; Deng, Shiquan; Chen, Yan

    2018-03-01

    High resolution image change detection is one of the key technologies of remote sensing application, which is of great significance for resource survey, environmental monitoring, fine agriculture, military mapping and battlefield environment detection. In this paper, for high-resolution satellite imagery, Random Forest (RF), Support Vector Machine (SVM), Deep belief network (DBN), and Adaboost models were established to verify the possibility of different machine learning applications in change detection. In order to compare detection accuracy of four machine learning Method, we applied these four machine learning methods for two high-resolution images. The results shows that SVM has higher overall accuracy at small samples compared to RF, Adaboost, and DBN for binary and from-to change detection. With the increase in the number of samples, RF has higher overall accuracy compared to Adaboost, SVM and DBN.

  1. Cost Optimization on Energy Consumption of Punching Machine Based on Green Manufacturing Method at PT Buana Intan Gemilang

    Directory of Open Access Journals (Sweden)

    Prillia Ayudia

    2017-01-01

    Full Text Available PT Buana Intan Gemilang is a company engaged in textile industry. The curtain textile production need punching machine to control the fabric process. The operator still works manually so it takes high cost of electrical energy consumption. So to solve the problem can implement green manufacturing on punching machine. The method include firstly to identify the color by classifying the company into the black, brown, gray or green color categories using questionnaire. Secondly is improvement area to be optimized and analyzed. Improvement plan at this stage that is focusing on energy area and technology. Thirdly is process applies by modifying the technology through implementing automation system on the punching machine so that there is an increase of green level on the process machine. The result obtained after implement the method can save cost on electrical energy consumption in the amount of Rp 1.068.159/day.

  2. Method of Automatic Ontology Mapping through Machine Learning and Logic Mining

    Institute of Scientific and Technical Information of China (English)

    王英林

    2004-01-01

    Ontology mapping is the bottleneck of handling conflicts among heterogeneous ontologies and of implementing reconfiguration or interoperability of legacy systems. We proposed an ontology mapping method by using machine learning, type constraints and logic mining techniques. This method is able to find concept correspondences through instances and the result is optimized by using an error function; it is able to find attribute correspondence between two equivalent concepts and the mapping accuracy is enhanced by combining together instances learning, type constraints and the logic relations that are imbedded in instances; moreover, it solves the most common kind of categorization conflicts. We then proposed a merging algorithm to generate the shared ontology and proposed a reconfigurable architecture for interoperation based on multi agents. The legacy systems are encapsulated as information agents to participate in the integration system. Finally we give a simplified case study.

  3. An Evaluation of Machine Learning Methods to Detect Malicious SCADA Communications

    Energy Technology Data Exchange (ETDEWEB)

    Beaver, Justin M [ORNL; Borges, Raymond Charles [ORNL; Buckner, Mark A [ORNL

    2013-01-01

    Critical infrastructure Supervisory Control and Data Acquisition (SCADA) systems were designed to operate on closed, proprietary networks where a malicious insider posed the greatest threat potential. The centralization of control and the movement towards open systems and standards has improved the efficiency of industrial control, but has also exposed legacy SCADA systems to security threats that they were not designed to mitigate. This work explores the viability of machine learning methods in detecting the new threat scenarios of command and data injection. Similar to network intrusion detection systems in the cyber security domain, the command and control communications in a critical infrastructure setting are monitored, and vetted against examples of benign and malicious command traffic, in order to identify potential attack events. Multiple learning methods are evaluated using a dataset of Remote Terminal Unit communications, which included both normal operations and instances of command and data injection attack scenarios.

  4. Classification of ECG signal with Support Vector Machine Method for Arrhythmia Detection

    Science.gov (United States)

    Turnip, Arjon; Ilham Rizqywan, M.; Kusumandari, Dwi E.; Turnip, Mardi; Sihombing, Poltak

    2018-03-01

    An electrocardiogram is a potential bioelectric record that occurs as a result of cardiac activity. QRS Detection with zero crossing calculation is one method that can precisely determine peak R of QRS wave as part of arrhythmia detection. In this paper, two experimental scheme (2 minutes duration with different activities: relaxed and, typing) were conducted. From the two experiments it were obtained: accuracy, sensitivity, and positive predictivity about 100% each for the first experiment and about 79%, 93%, 83% for the second experiment, respectively. Furthermore, the feature set of MIT-BIH arrhythmia using the support vector machine (SVM) method on the WEKA software is evaluated. By combining the available attributes on the WEKA algorithm, the result is constant since all classes of SVM goes to the normal class with average 88.49% accuracy.

  5. Cost Optimization on Energy Consumption of Punching Machine Based on Green Manufacturing Method at PT Buana Intan Gemilang

    OpenAIRE

    Prillia Ayudia; Rachmat Haris; Mulyana Tatang

    2017-01-01

    PT Buana Intan Gemilang is a company engaged in textile industry. The curtain textile production need punching machine to control the fabric process. The operator still works manually so it takes high cost of electrical energy consumption. So to solve the problem can implement green manufacturing on punching machine. The method include firstly to identify the color by classifying the company into the black, brown, gray or green color categories using questionnaire. Secondly is improvement are...

  6. Methods and means for improving the man-machine systems for NPP control

    International Nuclear Information System (INIS)

    Konstantinov, L.V.; Rakitin, I.D.

    1984-01-01

    Consideration is being given to the role of ''human factors'' and the ways of improving the man-machine interaction in NPP control and safety systems (CSS). Simulators and tAaining equipment on the basis of dynamic power unit models used for training and improving skill of NPP operatoAs, as well as for mastering collective actions of personnel under accidental conditions are considered in detail. The most perfect program complexes for fast NPP diagnostics and theiA pealization in the Federal Republic of Germany, Japan, Canada, the USA and other countries are described. A special attention is paid to the means and methods of videoterminal dialogue operator interaction with an object both in normal and extreme situations. It is noted that the problems of the man-machine interaction have become the subject of study only in the end of 70s after analyzing the causes of the Three-Mile-Island accident (USA). Publications dealing with the development of perspective control rooms for NPP were analyzed. It was concluded that radical changes both in equipment and principles of organizing the personnel activity will take place in the nearest future. They will be based on the progress in creating dialogue means and computers of the fourth and fifth generations as well as on engineering and psychological and technical aspects of designing

  7. Estimating the complexity of 3D structural models using machine learning methods

    Science.gov (United States)

    Mejía-Herrera, Pablo; Kakurina, Maria; Royer, Jean-Jacques

    2016-04-01

    Quantifying the complexity of 3D geological structural models can play a major role in natural resources exploration surveys, for predicting environmental hazards or for forecasting fossil resources. This paper proposes a structural complexity index which can be used to help in defining the degree of effort necessary to build a 3D model for a given degree of confidence, and also to identify locations where addition efforts are required to meet a given acceptable risk of uncertainty. In this work, it is considered that the structural complexity index can be estimated using machine learning methods on raw geo-data. More precisely, the metrics for measuring the complexity can be approximated as the difficulty degree associated to the prediction of the geological objects distribution calculated based on partial information on the actual structural distribution of materials. The proposed methodology is tested on a set of 3D synthetic structural models for which the degree of effort during their building is assessed using various parameters (such as number of faults, number of part in a surface object, number of borders, ...), the rank of geological elements contained in each model, and, finally, their level of deformation (folding and faulting). The results show how the estimated complexity in a 3D model can be approximated by the quantity of partial data necessaries to simulated at a given precision the actual 3D model without error using machine learning algorithms.

  8. An illustration of new methods in machine condition monitoring, Part I: stochastic resonance

    International Nuclear Information System (INIS)

    Worden, K.; Antoniadou, I.; Marchesiello, S.; Mba, C.; Garibaldi, L.

    2017-01-01

    There have been many recent developments in the application of data-based methods to machine condition monitoring. A powerful methodology based on machine learning has emerged, where diagnostics are based on a two-step procedure: extraction of damage-sensitive features, followed by unsupervised learning (novelty detection) or supervised learning (classification). The objective of the current pair of papers is simply to illustrate one state-of-the-art procedure for each step, using synthetic data representative of reality in terms of size and complexity. The first paper in the pair will deal with feature extraction. Although some papers have appeared in the recent past considering stochastic resonance as a means of amplifying damage information in signals, they have largely relied on ad hoc specifications of the resonator used. In contrast, the current paper will adopt a principled optimisation-based approach to the resonator design. The paper will also show that a discrete dynamical system can provide all the benefits of a continuous system, but also provide a considerable speed-up in terms of simulation time in order to facilitate the optimisation approach. (paper)

  9. A New Error Analysis and Accuracy Synthesis Method for Shoe Last Machine

    Directory of Open Access Journals (Sweden)

    Bian Xiangjuan

    2014-05-01

    Full Text Available In order to improve the manufacturing precision of the shoe last machine, a new error-computing model has been put forward to. At first, Based on the special topological structure of the shoe last machine and multi-rigid body system theory, a spatial error-calculating model of the system was built; Then, the law of error distributing in the whole work space was discussed, and the maximum error position of the system was found; At last, The sensitivities of error parameters were analyzed at the maximum position and the accuracy synthesis was conducted by using Monte Carlo method. Considering the error sensitivities analysis, the accuracy of the main parts was distributed. Results show that the probability of the maximal volume error less than 0.05 mm of the new scheme was improved from 0.6592 to 0.7021 than the probability of the old scheme, the precision of the system was improved obviously, the model can be used for the error analysis and accuracy synthesis of the complex multi- embranchment motion chain system, and to improve the system precision of manufacturing.

  10. MU-LOC: A Machine-Learning Method for Predicting Mitochondrially Localized Proteins in Plants

    Directory of Open Access Journals (Sweden)

    Ning Zhang

    2018-05-01

    Full Text Available Targeting and translocation of proteins to the appropriate subcellular compartments are crucial for cell organization and function. Newly synthesized proteins are transported to mitochondria with the assistance of complex targeting sequences containing either an N-terminal pre-sequence or a multitude of internal signals. Compared with experimental approaches, computational predictions provide an efficient way to infer subcellular localization of a protein. However, it is still challenging to predict plant mitochondrially localized proteins accurately due to various limitations. Consequently, the performance of current tools can be improved with new data and new machine-learning methods. We present MU-LOC, a novel computational approach for large-scale prediction of plant mitochondrial proteins. We collected a comprehensive dataset of plant subcellular localization, extracted features including amino acid composition, protein position weight matrix, and gene co-expression information, and trained predictors using deep neural network and support vector machine. Benchmarked on two independent datasets, MU-LOC achieved substantial improvements over six state-of-the-art tools for plant mitochondrial targeting prediction. In addition, MU-LOC has the advantage of predicting plant mitochondrial proteins either possessing or lacking N-terminal pre-sequences. We applied MU-LOC to predict candidate mitochondrial proteins for the whole proteome of Arabidopsis and potato. MU-LOC is publicly available at http://mu-loc.org.

  11. Logic Learning Machine and standard supervised methods for Hodgkin's lymphoma prognosis using gene expression data and clinical variables.

    Science.gov (United States)

    Parodi, Stefano; Manneschi, Chiara; Verda, Damiano; Ferrari, Enrico; Muselli, Marco

    2018-03-01

    This study evaluates the performance of a set of machine learning techniques in predicting the prognosis of Hodgkin's lymphoma using clinical factors and gene expression data. Analysed samples from 130 Hodgkin's lymphoma patients included a small set of clinical variables and more than 54,000 gene features. Machine learning classifiers included three black-box algorithms ( k-nearest neighbour, Artificial Neural Network, and Support Vector Machine) and two methods based on intelligible rules (Decision Tree and the innovative Logic Learning Machine method). Support Vector Machine clearly outperformed any of the other methods. Among the two rule-based algorithms, Logic Learning Machine performed better and identified a set of simple intelligible rules based on a combination of clinical variables and gene expressions. Decision Tree identified a non-coding gene ( XIST) involved in the early phases of X chromosome inactivation that was overexpressed in females and in non-relapsed patients. XIST expression might be responsible for the better prognosis of female Hodgkin's lymphoma patients.

  12. Can Machines Learn Respiratory Virus Epidemiology?: A Comparative Study of Likelihood-Free Methods for the Estimation of Epidemiological Dynamics

    Directory of Open Access Journals (Sweden)

    Heidi L. Tessmer

    2018-03-01

    Full Text Available To estimate and predict the transmission dynamics of respiratory viruses, the estimation of the basic reproduction number, R0, is essential. Recently, approximate Bayesian computation methods have been used as likelihood free methods to estimate epidemiological model parameters, particularly R0. In this paper, we explore various machine learning approaches, the multi-layer perceptron, convolutional neural network, and long-short term memory, to learn and estimate the parameters. Further, we compare the accuracy of the estimates and time requirements for machine learning and the approximate Bayesian computation methods on both simulated and real-world epidemiological data from outbreaks of influenza A(H1N1pdm09, mumps, and measles. We find that the machine learning approaches can be verified and tested faster than the approximate Bayesian computation method, but that the approximate Bayesian computation method is more robust across different datasets.

  13. Quantitative Diagnosis of Rotor Vibration Fault Using Process Power Spectrum Entropy and Support Vector Machine Method

    Directory of Open Access Journals (Sweden)

    Cheng-Wei Fei

    2014-01-01

    Full Text Available To improve the diagnosis capacity of rotor vibration fault in stochastic process, an effective fault diagnosis method (named Process Power Spectrum Entropy (PPSE and Support Vector Machine (SVM (PPSE-SVM, for short method was proposed. The fault diagnosis model of PPSE-SVM was established by fusing PPSE method and SVM theory. Based on the simulation experiment of rotor vibration fault, process data for four typical vibration faults (rotor imbalance, shaft misalignment, rotor-stator rubbing, and pedestal looseness were collected under multipoint (multiple channels and multispeed. By using PPSE method, the PPSE values of these data were extracted as fault feature vectors to establish the SVM model of rotor vibration fault diagnosis. From rotor vibration fault diagnosis, the results demonstrate that the proposed method possesses high precision, good learning ability, good generalization ability, and strong fault-tolerant ability (robustness in four aspects of distinguishing fault types, fault severity, fault location, and noise immunity of rotor stochastic vibration. This paper presents a novel method (PPSE-SVM for rotor vibration fault diagnosis and real-time vibration monitoring. The presented effort is promising to improve the fault diagnosis precision of rotating machinery like gas turbine.

  14. Using multivariate machine learning methods and structural MRI to classify childhood onset schizophrenia and healthy controls

    Directory of Open Access Journals (Sweden)

    Deanna eGreenstein

    2012-06-01

    Full Text Available Introduction: Multivariate machine learning methods can be used to classify groups of schizophrenia patients and controls using structural magnetic resonance imaging (MRI. However, machine learning methods to date have not been extended beyond classification and contemporaneously applied in a meaningful way to clinical measures. We hypothesized that brain measures would classify groups, and that increased likelihood of being classified as a patient using regional brain measures would be positively related to illness severity, developmental delays and genetic risk. Methods: Using 74 anatomic brain MRI sub regions and Random Forest, we classified 98 COS patients and 99 age, sex, and ethnicity-matched healthy controls. We also used Random Forest to determine the likelihood of being classified as a schizophrenia patient based on MRI measures. We then explored relationships between brain-based probability of illness and symptoms, premorbid development, and presence of copy number variation associated with schizophrenia. Results: Brain regions jointly classified COS and control groups with 73.7% accuracy. Greater brain-based probability of illness was associated with worse functioning (p= 0.0004 and fewer developmental delays (p=0.02. Presence of copy number variation (CNV was associated with lower probability of being classified as schizophrenia (p=0.001. The regions that were most important in classifying groups included left temporal lobes, bilateral dorsolateral prefrontal regions, and left medial parietal lobes. Conclusions: Schizophrenia and control groups can be well classified using Random Forest and anatomic brain measures, and brain-based probability of illness has a positive relationship with illness severity and a negative relationship with developmental delays/problems and CNV-based risk.

  15. Reinforcement Learning Based Artificial Immune Classifier

    Directory of Open Access Journals (Sweden)

    Mehmet Karakose

    2013-01-01

    Full Text Available One of the widely used methods for classification that is a decision-making process is artificial immune systems. Artificial immune systems based on natural immunity system can be successfully applied for classification, optimization, recognition, and learning in real-world problems. In this study, a reinforcement learning based artificial immune classifier is proposed as a new approach. This approach uses reinforcement learning to find better antibody with immune operators. The proposed new approach has many contributions according to other methods in the literature such as effectiveness, less memory cell, high accuracy, speed, and data adaptability. The performance of the proposed approach is demonstrated by simulation and experimental results using real data in Matlab and FPGA. Some benchmark data and remote image data are used for experimental results. The comparative results with supervised/unsupervised based artificial immune system, negative selection classifier, and resource limited artificial immune classifier are given to demonstrate the effectiveness of the proposed new method.

  16. Entropy method combined with extreme learning machine method for the short-term photovoltaic power generation forecasting

    International Nuclear Information System (INIS)

    Tang, Pingzhou; Chen, Di; Hou, Yushuo

    2016-01-01

    As the world’s energy problem becomes more severe day by day, photovoltaic power generation has opened a new door for us with no doubt. It will provide an effective solution for this severe energy problem and meet human’s needs for energy if we can apply photovoltaic power generation in real life, Similar to wind power generation, photovoltaic power generation is uncertain. Therefore, the forecast of photovoltaic power generation is very crucial. In this paper, entropy method and extreme learning machine (ELM) method were combined to forecast a short-term photovoltaic power generation. First, entropy method is used to process initial data, train the network through the data after unification, and then forecast electricity generation. Finally, the data results obtained through the entropy method with ELM were compared with that generated through generalized regression neural network (GRNN) and radial basis function neural network (RBF) method. We found that entropy method combining with ELM method possesses higher accuracy and the calculation is faster.

  17. Predicting metabolic syndrome using decision tree and support vector machine methods

    Directory of Open Access Journals (Sweden)

    Farzaneh Karimi-Alavijeh

    2016-06-01

    Full Text Available BACKGROUND: Metabolic syndrome which underlies the increased prevalence of cardiovascular disease and Type 2 diabetes is considered as a group of metabolic abnormalities including central obesity, hypertriglyceridemia, glucose intolerance, hypertension, and dyslipidemia. Recently, artificial intelligence based health-care systems are highly regarded because of its success in diagnosis, prediction, and choice of treatment. This study employs machine learning technics for predict the metabolic syndrome. METHODS: This study aims to employ decision tree and support vector machine (SVM to predict the 7-year incidence of metabolic syndrome. This research is a practical one in which data from 2107 participants of Isfahan Cohort Study has been utilized. The subjects without metabolic syndrome according to the ATPIII criteria were selected. The features that have been used in this data set include: gender, age, weight, body mass index, waist circumference, waist-to-hip ratio, hip circumference, physical activity, smoking, hypertension, antihypertensive medication use, systolic blood pressure (BP, diastolic BP, fasting blood sugar, 2-hour blood glucose, triglycerides (TGs, total cholesterol, low-density lipoprotein, high density lipoprotein-cholesterol, mean corpuscular volume, and mean corpuscular hemoglobin. Metabolic syndrome was diagnosed based on ATPIII criteria and two methods of decision tree and SVM were selected to predict the metabolic syndrome. The criteria of sensitivity, specificity and accuracy were used for validation. RESULTS: SVM and decision tree methods were examined according to the criteria of sensitivity, specificity and accuracy. Sensitivity, specificity and accuracy were 0.774 (0.758, 0.74 (0.72 and 0.757 (0.739 in SVM (decision tree method. CONCLUSION: The results show that SVM method sensitivity, specificity and accuracy is more efficient than decision tree. The results of decision tree method show that the TG is the most

  18. Methods, systems and apparatus for controlling third harmonic voltage when operating a multi-space machine in an overmodulation region

    Science.gov (United States)

    Perisic, Milun; Kinoshita, Michael H; Ranson, Ray M; Gallegos-Lopez, Gabriel

    2014-06-03

    Methods, system and apparatus are provided for controlling third harmonic voltages when operating a multi-phase machine in an overmodulation region. The multi-phase machine can be, for example, a five-phase machine in a vector controlled motor drive system that includes a five-phase PWM controlled inverter module that drives the five-phase machine. Techniques for overmodulating a reference voltage vector are provided. For example, when the reference voltage vector is determined to be within the overmodulation region, an angle of the reference voltage vector can be modified to generate a reference voltage overmodulation control angle, and a magnitude of the reference voltage vector can be modified, based on the reference voltage overmodulation control angle, to generate a modified magnitude of the reference voltage vector. By modifying the reference voltage vector, voltage command signals that control a five-phase inverter module can be optimized to increase output voltages generated by the five-phase inverter module.

  19. Diagnostic Method of Diabetes Based on Support Vector Machine and Tongue Images

    Directory of Open Access Journals (Sweden)

    Jianfeng Zhang

    2017-01-01

    Full Text Available Objective. The purpose of this research is to develop a diagnostic method of diabetes based on standardized tongue image using support vector machine (SVM. Methods. Tongue images of 296 diabetic subjects and 531 nondiabetic subjects were collected by the TDA-1 digital tongue instrument. Tongue body and tongue coating were separated by the division-merging method and chrominance-threshold method. With extracted color and texture features of the tongue image as input variables, the diagnostic model of diabetes with SVM was trained. After optimizing the combination of SVM kernel parameters and input variables, the influences of the combinations on the model were analyzed. Results. After normalizing parameters of tongue images, the accuracy rate of diabetes predication was increased from 77.83% to 78.77%. The accuracy rate and area under curve (AUC were not reduced after reducing the dimensions of tongue features with principal component analysis (PCA, while substantially saving the training time. During the training for selecting SVM parameters by genetic algorithm (GA, the accuracy rate of cross-validation was grown from 72% or so to 83.06%. Finally, we compare with several state-of-the-art algorithms, and experimental results show that our algorithm has the best predictive accuracy. Conclusions. The diagnostic method of diabetes on the basis of tongue images in Traditional Chinese Medicine (TCM is of great value, indicating the feasibility of digitalized tongue diagnosis.

  20. Machine learning in cardiovascular medicine: are we there yet?

    Science.gov (United States)

    Shameer, Khader; Johnson, Kipp W; Glicksberg, Benjamin S; Dudley, Joel T; Sengupta, Partho P

    2018-01-19

    Artificial intelligence (AI) broadly refers to analytical algorithms that iteratively learn from data, allowing computers to find hidden insights without being explicitly programmed where to look. These include a family of operations encompassing several terms like machine learning, cognitive learning, deep learning and reinforcement learning-based methods that can be used to integrate and interpret complex biomedical and healthcare data in scenarios where traditional statistical methods may not be able to perform. In this review article, we discuss the basics of machine learning algorithms and what potential data sources exist; evaluate the need for machine learning; and examine the potential limitations and challenges of implementing machine in the context of cardiovascular medicine. The most promising avenues for AI in medicine are the development of automated risk prediction algorithms which can be used to guide clinical care; use of unsupervised learning techniques to more precisely phenotype complex disease; and the implementation of reinforcement learning algorithms to intelligently augment healthcare providers. The utility of a machine learning-based predictive model will depend on factors including data heterogeneity, data depth, data breadth, nature of modelling task, choice of machine learning and feature selection algorithms, and orthogonal evidence. A critical understanding of the strength and limitations of various methods and tasks amenable to machine learning is vital. By leveraging the growing corpus of big data in medicine, we detail pathways by which machine learning may facilitate optimal development of patient-specific models for improving diagnoses, intervention and outcome in cardiovascular medicine. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted.

  1. Filling machine preventive maintenance using age replacement method in PT Lucas Djaja

    Directory of Open Access Journals (Sweden)

    Mustofa Fifi Herni

    2018-01-01

    Full Text Available PT Lucas Djaja is a company engaged in the pharmaceutical industry which produce sterile drugs and non-sterile. Filling machine has a high failure rate and expensive corrective maintenance cost. PT Lucas Djaja has a policy to perform engine maintenance by way of corrective maintenance. The study focused on the critical components, namely bearing R2, bearing 625 and bearing 626. When the replacement of the failure done by the company is currently using the formula mean time to failure with the result of bearing R2 at point 165 days, bearing 625 at a point 205 days, and bearing 626 at a point 182 days. Solutions generated by using age replacement method with minimization of total maintenance cost given on the bearing R2 at a point 60 days, bearing 625 at the point of 80 days and bearing 626 at a point 40 days.

  2. Glucose Oxidase Biosensor Modeling and Predictors Optimization by Machine Learning Methods.

    Science.gov (United States)

    Gonzalez-Navarro, Felix F; Stilianova-Stoytcheva, Margarita; Renteria-Gutierrez, Livier; Belanche-Muñoz, Lluís A; Flores-Rios, Brenda L; Ibarra-Esquer, Jorge E

    2016-10-26

    Biosensors are small analytical devices incorporating a biological recognition element and a physico-chemical transducer to convert a biological signal into an electrical reading. Nowadays, their technological appeal resides in their fast performance, high sensitivity and continuous measuring capabilities; however, a full understanding is still under research. This paper aims to contribute to this growing field of biotechnology, with a focus on Glucose-Oxidase Biosensor (GOB) modeling through statistical learning methods from a regression perspective. We model the amperometric response of a GOB with dependent variables under different conditions, such as temperature, benzoquinone, pH and glucose concentrations, by means of several machine learning algorithms. Since the sensitivity of a GOB response is strongly related to these dependent variables, their interactions should be optimized to maximize the output signal, for which a genetic algorithm and simulated annealing are used. We report a model that shows a good generalization error and is consistent with the optimization.

  3. Prediction of Student Dropout in E-Learning Program Through the Use of Machine Learning Method

    Directory of Open Access Journals (Sweden)

    Mingjie Tan

    2015-02-01

    Full Text Available The high rate of dropout is a serious problem in E-learning program. Thus it has received extensive concern from the education administrators and researchers. Predicting the potential dropout students is a workable solution to prevent dropout. Based on the analysis of related literature, this study selected student’s personal characteristic and academic performance as input attributions. Prediction models were developed using Artificial Neural Network (ANN, Decision Tree (DT and Bayesian Networks (BNs. A large sample of 62375 students was utilized in the procedures of model training and testing. The results of each model were presented in confusion matrix, and analyzed by calculating the rates of accuracy, precision, recall, and F-measure. The results suggested all of the three machine learning methods were effective in student dropout prediction, and DT presented a better performance. Finally, some suggestions were made for considerable future research.

  4. Android Used in The Learning Innovation Atwood Machines on Lagrange Mechanics Methods

    Directory of Open Access Journals (Sweden)

    Shabrina Shabrina

    2017-12-01

    Full Text Available Android is one of the smartphone operating system platforms that is now widely developed in learning media. Android allows the learning process to be more flexible and not oriented to be teacher center, but it allows to be student center. The Atwood machines is an experimental tool that is often used to observe mechanical laws in constantly accelerated motion which can also be described by the Lagrange mechanics methods. As an innovative and alternative learning activity, Atwood Android-based learning apps are running for two experimental variations, which are variations in load in cart and load masses that are hung. The experiment of load-carrier mass variation found that the larger load mass in the cart, the smaller the acceleration experienced by the system. Meanwhile, the experiment on the variation of the loaded mass found that the larger the loaded mass, the greater the acceleration experienced by the system.

  5. Real Time Monitoring System of Pollution Waste on Musi River Using Support Vector Machine (SVM) Method

    Science.gov (United States)

    Fachrurrozi, Muhammad; Saparudin; Erwin

    2017-04-01

    Real-time Monitoring and early detection system which measures the quality standard of waste in Musi River, Palembang, Indonesia is a system for determining air and water pollution level. This system was designed in order to create an integrated monitoring system and provide real time information that can be read. It is designed to measure acidity and water turbidity polluted by industrial waste, as well as to show and provide conditional data integrated in one system. This system consists of inputting and processing the data, and giving output based on processed data. Turbidity, substances, and pH sensor is used as a detector that produce analog electrical direct current voltage (DC). Early detection system works by determining the value of the ammonia threshold, acidity, and turbidity level of water in Musi River. The results is then presented based on the level group pollution by the Support Vector Machine classification method.

  6. Glucose Oxidase Biosensor Modeling and Predictors Optimization by Machine Learning Methods

    Directory of Open Access Journals (Sweden)

    Felix F. Gonzalez-Navarro

    2016-10-01

    Full Text Available Biosensors are small analytical devices incorporating a biological recognition element and a physico-chemical transducer to convert a biological signal into an electrical reading. Nowadays, their technological appeal resides in their fast performance, high sensitivity and continuous measuring capabilities; however, a full understanding is still under research. This paper aims to contribute to this growing field of biotechnology, with a focus on Glucose-Oxidase Biosensor (GOB modeling through statistical learning methods from a regression perspective. We model the amperometric response of a GOB with dependent variables under different conditions, such as temperature, benzoquinone, pH and glucose concentrations, by means of several machine learning algorithms. Since the sensitivity of a GOB response is strongly related to these dependent variables, their interactions should be optimized to maximize the output signal, for which a genetic algorithm and simulated annealing are used. We report a model that shows a good generalization error and is consistent with the optimization.

  7. A Hierarchical Approach Using Machine Learning Methods in Solar Photovoltaic Energy Production Forecasting

    Directory of Open Access Journals (Sweden)

    Zhaoxuan Li

    2016-01-01

    Full Text Available We evaluate and compare two common methods, artificial neural networks (ANN and support vector regression (SVR, for predicting energy productions from a solar photovoltaic (PV system in Florida 15 min, 1 h and 24 h ahead of time. A hierarchical approach is proposed based on the machine learning algorithms tested. The production data used in this work corresponds to 15 min averaged power measurements collected from 2014. The accuracy of the model is determined using computing error statistics such as mean bias error (MBE, mean absolute error (MAE, root mean square error (RMSE, relative MBE (rMBE, mean percentage error (MPE and relative RMSE (rRMSE. This work provides findings on how forecasts from individual inverters will improve the total solar power generation forecast of the PV system.

  8. Detection of needle to nerve contact based on electric bioimpedance and machine learning methods.

    Science.gov (United States)

    Kalvoy, Havard; Tronstad, Christian; Ullensvang, Kyrre; Steinfeldt, Thorsten; Sauter, Axel R

    2017-07-01

    In an ongoing project for electrical impedance-based needle guidance we have previously showed in an animal model that intraneural needle positions can be detected with bioimpedance measurement. To enhance the power of this method we in this study have investigated whether an early detection of the needle only touching the nerve also is feasible. Measurement of complex impedance during needle to nerve contact was compared with needle positions in surrounding tissues in a volunteer study on 32 subjects. Classification analysis using Support-Vector Machines demonstrated that discrimination is possible, but that the sensitivity and specificity for the nerve touch algorithm not is at the same level of performance as for intra-neuralintraneural detection.

  9. A control system for and a method of controlling a superconductive rotating electrical machine

    DEFF Research Database (Denmark)

    2014-01-01

    This invention relates to a method of controlling and a control system (100) for a superconductive rotating electric machine (200) comprising at least one superconductive winding (102; 103), where the control system (100) is adapted to control a power unit (101) supplying during use the at least...... or more actual values (110, 111)of one or more parameters for a given superconductive winding (102; 103), each parameter representing a physical condition of the given superconductive winding (102; 103), and to dynamically derive one or more electrical current values to be maintained in the given...... superconductive winding (102; 103) by the power unit (101) where the one or more electrical current values is/are derived taking into account the received one or more actual values (110, 111). In this way,greater flexibility and more precise control of the performance of the superconducting rotating electrical...

  10. Predicting metabolic syndrome using decision tree and support vector machine methods.

    Science.gov (United States)

    Karimi-Alavijeh, Farzaneh; Jalili, Saeed; Sadeghi, Masoumeh

    2016-05-01

    Metabolic syndrome which underlies the increased prevalence of cardiovascular disease and Type 2 diabetes is considered as a group of metabolic abnormalities including central obesity, hypertriglyceridemia, glucose intolerance, hypertension, and dyslipidemia. Recently, artificial intelligence based health-care systems are highly regarded because of its success in diagnosis, prediction, and choice of treatment. This study employs machine learning technics for predict the metabolic syndrome. This study aims to employ decision tree and support vector machine (SVM) to predict the 7-year incidence of metabolic syndrome. This research is a practical one in which data from 2107 participants of Isfahan Cohort Study has been utilized. The subjects without metabolic syndrome according to the ATPIII criteria were selected. The features that have been used in this data set include: gender, age, weight, body mass index, waist circumference, waist-to-hip ratio, hip circumference, physical activity, smoking, hypertension, antihypertensive medication use, systolic blood pressure (BP), diastolic BP, fasting blood sugar, 2-hour blood glucose, triglycerides (TGs), total cholesterol, low-density lipoprotein, high density lipoprotein-cholesterol, mean corpuscular volume, and mean corpuscular hemoglobin. Metabolic syndrome was diagnosed based on ATPIII criteria and two methods of decision tree and SVM were selected to predict the metabolic syndrome. The criteria of sensitivity, specificity and accuracy were used for validation. SVM and decision tree methods were examined according to the criteria of sensitivity, specificity and accuracy. Sensitivity, specificity and accuracy were 0.774 (0.758), 0.74 (0.72) and 0.757 (0.739) in SVM (decision tree) method. The results show that SVM method sensitivity, specificity and accuracy is more efficient than decision tree. The results of decision tree method show that the TG is the most important feature in predicting metabolic syndrome. According

  11. Ideology of a multiparametric system for estimating the insulation system of electric machines on the basis of absorption testing methods

    Science.gov (United States)

    Kislyakov, M. A.; Chernov, V. A.; Maksimkin, V. L.; Bozhin, Yu. M.

    2017-12-01

    The article deals with modern methods of monitoring the state and predicting the life of electric machines. In 50% of the cases of failure in the performance of electric machines is associated with insulation damage. As promising, nondestructive methods of control, methods based on the investigation of the processes of polarization occurring in insulating materials are proposed. To improve the accuracy of determining the state of insulation, a multiparametric approach is considered, which is a basis for the development of an expert system for estimating the state of health.

  12. Evaluation of auto-assessment method for C-D analysis based on support vector machine

    International Nuclear Information System (INIS)

    Takei, Takaaki; Ikeda, Mitsuru; Imai, Kuniharu; Kamihira, Hiroaki; Kishimoto, Tomonari; Goto, Hiroya

    2010-01-01

    Contrast-Detail (C-D) analysis is one of the visual quality assessment methods in medical imaging, and many auto-assessment methods for C-D analysis have been developed in recent years. However, for the auto-assessment method for C-D analysis, the effects of nonlinear image processing are not clear. So, we have made an auto-assessment method for C-D analysis using a support vector machine (SVM), and have evaluated its performance for the images processed with a noise reduction method. The feature indexes used in the SVM were the normalized cross correlation (NCC) coefficient on each signal between the noise-free and noised image, the contrast to noise ratio (CNR) on each signal, the radius of each signal, and the Student's t-test statistic for the mean difference between the signal and background pixel values. The results showed that the auto-assessment method for C-D analysis by using Student's t-test statistic agreed well with the visual assessment for the non-processed images, but disagreed for the images processed with the noise reduction method. Our results also showed that the auto-assessment method for C-D analysis by the SVM made of NCC and CNR agreed well with the visual assessment for the non-processed and noise-reduced images. Therefore, the auto-assessment method for C-D analysis by the SVM will be expected to have the robustness for the non-linear image processing. (author)

  13. Distinguishing butchery cut marks from crocodile bite marks through machine learning methods.

    Science.gov (United States)

    Domínguez-Rodrigo, Manuel; Baquedano, Enrique

    2018-04-10

    All models of evolution of human behaviour depend on the correct identification and interpretation of bone surface modifications (BSM) on archaeofaunal assemblages. Crucial evolutionary features, such as the origin of stone tool use, meat-eating, food-sharing, cooperation and sociality can only be addressed through confident identification and interpretation of BSM, and more specifically, cut marks. Recently, it has been argued that linear marks with the same properties as cut marks can be created by crocodiles, thereby questioning whether secure cut mark identifications can be made in the Early Pleistocene fossil record. Powerful classification methods based on multivariate statistics and machine learning (ML) algorithms have previously successfully discriminated cut marks from most other potentially confounding BSM. However, crocodile-made marks were marginal to or played no role in these comparative analyses. Here, for the first time, we apply state-of-the-art ML methods on crocodile linear BSM and experimental butchery cut marks, showing that the combination of multivariate taphonomy and ML methods provides accurate identification of BSM, including cut and crocodile bite marks. This enables empirically-supported hominin behavioural modelling, provided that these methods are applied to fossil assemblages.

  14. A New Application of Support Vector Machine Method: Condition Monitoring and Analysis of Reactor Coolant Pump

    International Nuclear Information System (INIS)

    Meng Qinghu; Meng Qingfeng; Feng Wuwei

    2012-01-01

    Fukushima nuclear power plant accident caused huge losses and pollution and it showed that the reactor coolant pump is very important in a nuclear power plant. Therefore, to keep the safety and reliability, the condition of the coolant pump needs to be online condition monitored and fault analyzed. In this paper, condition monitoring and analysis based on support vector machine (SVM) is proposed. This method is just to aim at the small sample studies such as reactor coolant pump. Both experiment data and field data are analyzed. In order to eliminate the noise and useless frequency, these data are disposed through a multi-band FIR filter. After that, a fault feature selection method based on principal component analysis is proposed. The related variable quantity is changed into unrelated variable quantity, and the dimension is descended. Then the SVM method is used to separate different fault characteristics. Firstly, this method is used as a two-kind classifier to separate each two different running conditions. Then the SVM is used as a multiple classifier to separate all of the different condition types. The SVM could separate these conditions successfully. After that, software based on SVM was designed for reactor coolant pump condition analysis. This software is installed on the reactor plant control system of Qinshan nuclear power plant in China. It could monitor the online data and find the pump mechanical fault automatically.

  15. Machine learning plus optical flow: a simple and sensitive method to detect cardioactive drugs

    Science.gov (United States)

    Lee, Eugene K.; Kurokawa, Yosuke K.; Tu, Robin; George, Steven C.; Khine, Michelle

    2015-07-01

    Current preclinical screening methods do not adequately detect cardiotoxicity. Using human induced pluripotent stem cell-derived cardiomyocytes (iPS-CMs), more physiologically relevant preclinical or patient-specific screening to detect potential cardiotoxic effects of drug candidates may be possible. However, one of the persistent challenges for developing a high-throughput drug screening platform using iPS-CMs is the need to develop a simple and reliable method to measure key electrophysiological and contractile parameters. To address this need, we have developed a platform that combines machine learning paired with brightfield optical flow as a simple and robust tool that can automate the detection of cardiomyocyte drug effects. Using three cardioactive drugs of different mechanisms, including those with primarily electrophysiological effects, we demonstrate the general applicability of this screening method to detect subtle changes in cardiomyocyte contraction. Requiring only brightfield images of cardiomyocyte contractions, we detect changes in cardiomyocyte contraction comparable to - and even superior to - fluorescence readouts. This automated method serves as a widely applicable screening tool to characterize the effects of drugs on cardiomyocyte function.

  16. A multilevel-ROI-features-based machine learning method for detection of morphometric biomarkers in Parkinson's disease.

    Science.gov (United States)

    Peng, Bo; Wang, Suhong; Zhou, Zhiyong; Liu, Yan; Tong, Baotong; Zhang, Tao; Dai, Yakang

    2017-06-09

    Machine learning methods have been widely used in recent years for detection of neuroimaging biomarkers in regions of interest (ROIs) and assisting diagnosis of neurodegenerative diseases. The innovation of this study is to use multilevel-ROI-features-based machine learning method to detect sensitive morphometric biomarkers in Parkinson's disease (PD). Specifically, the low-level ROI features (gray matter volume, cortical thickness, etc.) and high-level correlative features (connectivity between ROIs) are integrated to construct the multilevel ROI features. Filter- and wrapper- based feature selection method and multi-kernel support vector machine (SVM) are used in the classification algorithm. T1-weighted brain magnetic resonance (MR) images of 69 PD patients and 103 normal controls from the Parkinson's Progression Markers Initiative (PPMI) dataset are included in the study. The machine learning method performs well in classification between PD patients and normal controls with an accuracy of 85.78%, a specificity of 87.79%, and a sensitivity of 87.64%. The most sensitive biomarkers between PD patients and normal controls are mainly distributed in frontal lobe, parental lobe, limbic lobe, temporal lobe, and central region. The classification performance of our method with multilevel ROI features is significantly improved comparing with other classification methods using single-level features. The proposed method shows promising identification ability for detecting morphometric biomarkers in PD, thus confirming the potentiality of our method in assisting diagnosis of the disease. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. Laser Induced Damage of Potassium Dihydrogen Phosphate (KDP Optical Crystal Machined by Water Dissolution Ultra-Precision Polishing Method

    Directory of Open Access Journals (Sweden)

    Yuchuan Chen

    2018-03-01

    Full Text Available Laser induced damage threshold (LIDT is an important optical indicator for nonlinear Potassium Dihydrogen Phosphate (KDP crystal used in high power laser systems. In this study, KDP optical crystals are initially machined with single point diamond turning (SPDT, followed by water dissolution ultra-precision polishing (WDUP and then tested with 355 nm nanosecond pulsed-lasers. Power spectral density (PSD analysis shows that WDUP process eliminates the laser-detrimental spatial frequencies band of micro-waviness on SPDT machined surface and consequently decreases its modulation effect on the laser beams. The laser test results show that LIDT of WDUP machined crystal improves and its stability has a significant increase by 72.1% compared with that of SPDT. Moreover, a subsequent ultrasonic assisted solvent cleaning process is suggested to have a positive effect on the laser performance of machined KDP crystal. Damage crater investigation indicates that the damage morphologies exhibit highly thermal explosion features of melted cores and brittle fractures of periphery material, which can be described with the classic thermal explosion model. The comparison result demonstrates that damage mechanisms for SPDT and WDUP machined crystal are the same and WDUP process reveals the real bulk laser resistance of KDP optical crystal by removing the micro-waviness and subsurface damage on SPDT machined surface. This improvement of WDUP method makes the LIDT more accurate and will be beneficial to the laser performance of KDP crystal.

  18. Usage of I++ Simulator to Program Coordinate Measuring Machines when Common Programming Methods are difficult to apply

    Directory of Open Access Journals (Sweden)

    Gąska A.

    2014-02-01

    Full Text Available Nowadays, simulators facilitate tasks performed daily by the engineers of different branches, including coordinate metrologists. Sometimes it is difficult or almost impossible to program a Coordinate Measuring Machine (CMM using standard methods. This happens, for example, during measurements of nano elements or in cases when measurements are performed on high-precision (accurate measuring machines which work in strictly air-conditioned spaces and the presence of the operator in such room during the programming of CMM could cause an increase in temperature, which in turn could make it necessary to wait some time until conditions stabilize. This article describes functioning of a simulator and its usage during Coordinate Measuring Machine programming in the latter situation. Article also describes a general process of programming CMMs which ensures the correct machine performance after starting the program on a real machine. As an example proving the presented considerations, measurement of exemplary workpiece, which was performed on the machine working in the strictly air-conditioned room, was described

  19. Seeing It All: Evaluating Supervised Machine Learning Methods for the Classification of Diverse Otariid Behaviours.

    Directory of Open Access Journals (Sweden)

    Monique A Ladds

    Full Text Available Constructing activity budgets for marine animals when they are at sea and cannot be directly observed is challenging, but recent advances in bio-logging technology offer solutions to this problem. Accelerometers can potentially identify a wide range of behaviours for animals based on unique patterns of acceleration. However, when analysing data derived from accelerometers, there are many statistical techniques available which when applied to different data sets produce different classification accuracies. We investigated a selection of supervised machine learning methods for interpreting behavioural data from captive otariids (fur seals and sea lions. We conducted controlled experiments with 12 seals, where their behaviours were filmed while they were wearing 3-axis accelerometers. From video we identified 26 behaviours that could be grouped into one of four categories (foraging, resting, travelling and grooming representing key behaviour states for wild seals. We used data from 10 seals to train four predictive classification models: stochastic gradient boosting (GBM, random forests, support vector machine using four different kernels and a baseline model: penalised logistic regression. We then took the best parameters from each model and cross-validated the results on the two seals unseen so far. We also investigated the influence of feature statistics (describing some characteristic of the seal, testing the models both with and without these. Cross-validation accuracies were lower than training accuracy, but the SVM with a polynomial kernel was still able to classify seal behaviour with high accuracy (>70%. Adding feature statistics improved accuracies across all models tested. Most categories of behaviour -resting, grooming and feeding-were all predicted with reasonable accuracy (52-81% by the SVM while travelling was poorly categorised (31-41%. These results show that model selection is important when classifying behaviour and that by using

  20. On Plant Detection of Intact Tomato Fruits Using Image Analysis and Machine Learning Methods

    Directory of Open Access Journals (Sweden)

    Kyosuke Yamamoto

    2014-07-01

    Full Text Available Fully automated yield estimation of intact fruits prior to harvesting provides various benefits to farmers. Until now, several studies have been conducted to estimate fruit yield using image-processing technologies. However, most of these techniques require thresholds for features such as color, shape and size. In addition, their performance strongly depends on the thresholds used, although optimal thresholds tend to vary with images. Furthermore, most of these techniques have attempted to detect only mature and immature fruits, although the number of young fruits is more important for the prediction of long-term fluctuations in yield. In this study, we aimed to develop a method to accurately detect individual intact tomato fruits including mature, immature and young fruits on a plant using a conventional RGB digital camera in conjunction with machine learning approaches. The developed method did not require an adjustment of threshold values for fruit detection from each image because image segmentation was conducted based on classification models generated in accordance with the color, shape, texture and size of the images. The results of fruit detection in the test images showed that the developed method achieved a recall of 0.80, while the precision was 0.88. The recall values of mature, immature and young fruits were 1.00, 0.80 and 0.78, respectively.

  1. Spectral methods in machine learning and new strategies for very large datasets

    Science.gov (United States)

    Belabbas, Mohamed-Ali; Wolfe, Patrick J.

    2009-01-01

    Spectral methods are of fundamental importance in statistics and machine learning, because they underlie algorithms from classical principal components analysis to more recent approaches that exploit manifold structure. In most cases, the core technical problem can be reduced to computing a low-rank approximation to a positive-definite kernel. For the growing number of applications dealing with very large or high-dimensional datasets, however, the optimal approximation afforded by an exact spectral decomposition is too costly, because its complexity scales as the cube of either the number of training examples or their dimensionality. Motivated by such applications, we present here 2 new algorithms for the approximation of positive-semidefinite kernels, together with error bounds that improve on results in the literature. We approach this problem by seeking to determine, in an efficient manner, the most informative subset of our data relative to the kernel approximation task at hand. This leads to two new strategies based on the Nyström method that are directly applicable to massive datasets. The first of these—based on sampling—leads to a randomized algorithm whereupon the kernel induces a probability distribution on its set of partitions, whereas the latter approach—based on sorting—provides for the selection of a partition in a deterministic way. We detail their numerical implementation and provide simulation results for a variety of representative problems in statistical data analysis, each of which demonstrates the improved performance of our approach relative to existing methods. PMID:19129490

  2. Comparison of Machine Learning Methods for the Purpose Of Human Fall Detection

    Directory of Open Access Journals (Sweden)

    Strémy Maximilián

    2014-12-01

    Full Text Available According to several studies, the European population is rapidly aging far over last years. It is therefore important to ensure that aging population is able to live independently without the support of working-age population. In accordance with the studies, fall is the most dangerous and frequent accident in the everyday life of aging population. In our paper, we present a system to track the human fall by a visual detection, i.e. using no wearable equipment. For this purpose, we used a Kinect sensor, which provides the human body position in the Cartesian coordinates. It is possible to directly capture a human body because the Kinect sensor has a depth and also an infrared camera. The first step in our research was to detect postures and classify the fall accident. We experimented and compared the selected machine learning methods including Naive Bayes, decision trees and SVM method to compare the performance in recognizing the human postures (standing, sitting and lying. The highest classification accuracy of over 93.3% was achieved by the decision tree method.

  3. A Fault Alarm and Diagnosis Method Based on Sensitive Parameters and Support Vector Machine

    Science.gov (United States)

    Zhang, Jinjie; Yao, Ziyun; Lv, Zhiquan; Zhu, Qunxiong; Xu, Fengtian; Jiang, Zhinong

    2015-08-01

    Study on the extraction of fault feature and the diagnostic technique of reciprocating compressor is one of the hot research topics in the field of reciprocating machinery fault diagnosis at present. A large number of feature extraction and classification methods have been widely applied in the related research, but the practical fault alarm and the accuracy of diagnosis have not been effectively improved. Developing feature extraction and classification methods to meet the requirements of typical fault alarm and automatic diagnosis in practical engineering is urgent task. The typical mechanical faults of reciprocating compressor are presented in the paper, and the existing data of online monitoring system is used to extract fault feature parameters within 15 types in total; the inner sensitive connection between faults and the feature parameters has been made clear by using the distance evaluation technique, also sensitive characteristic parameters of different faults have been obtained. On this basis, a method based on fault feature parameters and support vector machine (SVM) is developed, which will be applied to practical fault diagnosis. A better ability of early fault warning has been proved by the experiment and the practical fault cases. Automatic classification by using the SVM to the data of fault alarm has obtained better diagnostic accuracy.

  4. Teamwork: improved eQTL mapping using combinations of machine learning methods.

    Directory of Open Access Journals (Sweden)

    Marit Ackermann

    Full Text Available Expression quantitative trait loci (eQTL mapping is a widely used technique to uncover regulatory relationships between genes. A range of methodologies have been developed to map links between expression traits and genotypes. The DREAM (Dialogue on Reverse Engineering Assessments and Methods initiative is a community project to objectively assess the relative performance of different computational approaches for solving specific systems biology problems. The goal of one of the DREAM5 challenges was to reverse-engineer genetic interaction networks from synthetic genetic variation and gene expression data, which simulates the problem of eQTL mapping. In this framework, we proposed an approach whose originality resides in the use of a combination of existing machine learning algorithms (committee. Although it was not the best performer, this method was by far the most precise on average. After the competition, we continued in this direction by evaluating other committees using the DREAM5 data and developed a method that relies on Random Forests and LASSO. It achieved a much higher average precision than the DREAM best performer at the cost of slightly lower average sensitivity.

  5. Study on HRA-based method for assessing digital man-machine interface

    International Nuclear Information System (INIS)

    Li Pengcheng; Dai Licao; Zhang Li; Zhao Ming; Hu Hong

    2014-01-01

    In order to identify the design flaws of digital man-machine interface (MMI) that may trigger human errors or weaken the performance of operators, a HRA-based method (namely HCR + CREAM + HEC) for assessing digital MMI was established. Firstly, the HCR method was used to identify the risk scenarios of high human error probability from the overall event as a whole perspective. Then, for the identified high-risk scenarios, the CREAM was adopted to determine the various error modes and its error probability, and the failure probability was ranked. Finally, the human factors engineering checklist of digital MMI was established according to the characteristics of digital MMI, it was used to check the digital MMI with high error probability in order to identify the design flaws of digital MMI, and the suggestions of optimization were provided. The results show that the provided assessment method can quickly and efficiently identify the design flaws of digital MMI which easily trigger human errors, and the safety of operation of the digital control system for nuclear power plants can be enhanced by optimization of design. (authors)

  6. High Frequency Voltage Injection Methods and Observer Design for Initial Position Detection of Permanent Magnet Synchronous Machines

    DEFF Research Database (Denmark)

    Jin, Xinhai; Ni, Ronggang; Chen, Wei

    2018-01-01

    The information of the initial rotor position is essential for smooth start up and robust control of Permanent Magnet Synchronous Machines (PMSMs). RoTating Voltage Injection (RTVI) methods in the stationary reference frame have been commonly adopted to detect the initial rotor position at stands......The information of the initial rotor position is essential for smooth start up and robust control of Permanent Magnet Synchronous Machines (PMSMs). RoTating Voltage Injection (RTVI) methods in the stationary reference frame have been commonly adopted to detect the initial rotor position...

  7. Machine learning methods to predict child posttraumatic stress: a proof of concept study.

    Science.gov (United States)

    Saxe, Glenn N; Ma, Sisi; Ren, Jiwen; Aliferis, Constantin

    2017-07-10

    The care of traumatized children would benefit significantly from accurate predictive models for Posttraumatic Stress Disorder (PTSD), using information available around the time of trauma. Machine Learning (ML) computational methods have yielded strong results in recent applications across many diseases and data types, yet they have not been previously applied to childhood PTSD. Since these methods have not been applied to this complex and debilitating disorder, there is a great deal that remains to be learned about their application. The first step is to prove the concept: Can ML methods - as applied in other fields - produce predictive classification models for childhood PTSD? Additionally, we seek to determine if specific variables can be identified - from the aforementioned predictive classification models - with putative causal relations to PTSD. ML predictive classification methods - with causal discovery feature selection - were applied to a data set of 163 children hospitalized with an injury and PTSD was determined three months after hospital discharge. At the time of hospitalization, 105 risk factor variables were collected spanning a range of biopsychosocial domains. Seven percent of subjects had a high level of PTSD symptoms. A predictive classification model was discovered with significant predictive accuracy. A predictive model constructed based on subsets of potentially causally relevant features achieves similar predictivity compared to the best predictive model constructed with all variables. Causal Discovery feature selection methods identified 58 variables of which 10 were identified as most stable. In this first proof-of-concept application of ML methods to predict childhood Posttraumatic Stress we were able to determine both predictive classification models for childhood PTSD and identify several causal variables. This set of techniques has great potential for enhancing the methodological toolkit in the field and future studies should seek to

  8. A novel selection method of seismic attributes based on gray relational degree and support vector machine.

    Directory of Open Access Journals (Sweden)

    Yaping Huang

    Full Text Available The selection of seismic attributes is a key process in reservoir prediction because the prediction accuracy relies on the reliability and credibility of the seismic attributes. However, effective selection method for useful seismic attributes is still a challenge. This paper presents a novel selection method of seismic attributes for reservoir prediction based on the gray relational degree (GRD and support vector machine (SVM. The proposed method has a two-hierarchical structure. In the first hierarchy, the primary selection of seismic attributes is achieved by calculating the GRD between seismic attributes and reservoir parameters, and the GRD between the seismic attributes. The principle of the primary selection is that these seismic attributes with higher GRD to the reservoir parameters will have smaller GRD between themselves as compared to those with lower GRD to the reservoir parameters. Then the SVM is employed in the second hierarchy to perform an interactive error verification using training samples for the purpose of determining the final seismic attributes. A real-world case study was conducted to evaluate the proposed GRD-SVM method. Reliable seismic attributes were selected to predict the coalbed methane (CBM content in southern Qinshui basin, China. In the analysis, the instantaneous amplitude, instantaneous bandwidth, instantaneous frequency, and minimum negative curvature were selected, and the predicted CBM content was fundamentally consistent with the measured CBM content. This real-world case study demonstrates that the proposed method is able to effectively select seismic attributes, and improve the prediction accuracy. Thus, the proposed GRD-SVM method can be used for the selection of seismic attributes in practice.

  9. Digital signal processing control of induction machine`s torque and stator flux utilizing the direct stator flux field orientation method

    Energy Technology Data Exchange (ETDEWEB)

    Seiz, Julie Burger [Union College, Schenectady, NY (United States)

    1997-04-01

    This paper presents a review of the Direct Stator Flux Field Orientation control method. This method can be used to control an induction motor`s torque and flux directly and is the application of interest for this thesis. This control method is implemented without the traditional feedback loops and associated hardware. Predictions are made, by mathematical calculations, of the stator voltage vector. The voltage vector is determined twice a switching period. The switching period is fixed throughout the analysis. The three phase inverter duty cycle necessary to control the torque and flux of the induction machine is determined by the voltage space vector Pulse Width Modulation (PWM) technique. Transient performance of either the flux or torque requires an alternate modulation scheme which is also addressed in this thesis. A block diagram of this closed loop system is provided. 22 figs., 7 tabs.

  10. Music Learning Based on Computer Software

    Directory of Open Access Journals (Sweden)

    Baihui Yan

    2017-12-01

    Full Text Available In order to better develop and improve students’ music learning, the authors proposed the method of music learning based on computer software. It is still a new field to use computer music software to assist teaching. Hereby, we conducted an in-depth analysis on the computer-enabled music learning and the music learning status in secondary schools, obtaining the specific analytical data. Survey data shows that students have many cognitive problems in the current music classroom, and yet teachers have not found a reasonable countermeasure to them. Against this background, the introduction of computer music software to music learning is a new trial that can not only cultivate the students’ initiatives of music learning, but also enhance their abilities to learn music. Therefore, it is concluded that the computer software based music learning is of great significance to improving the current music learning modes and means.

  11. A new method for grain refinement in magnesium alloy: High speed extrusion machining

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Yao, E-mail: liuyao@ustb.edu.cn [School of Mathematics and Physics, University of Science and Technology Beijing, Beijing 100083 (China); Cai, Songlin [China Electric Power Research Institute, State Grid Corporation of China, Beijing 100192 (China); Dai, Lanhong [State Key Laboratory of Nonlinear Mechanics, Institute of Mechanics, Chinese Academy of Science, Beijing 100190 (China)

    2016-01-10

    Magnesium alloys have received broad attentions in industry due to their competitive strength to density ratio, but the poor ductility and strength limit their wide range of applications as engineering materials. A novel severe plastic deformation (SPD) technique of high speed extrusion machining (HSEM) was used here. This method could improve the aforementioned disadvantages of magnesium alloys by one single processing step. In this work, systematic HSEM experiments with different chip thickness ratios were conducted for magnesium alloy AZ31B. The microstructure of the chips reveals that HSEM is an effective SPD method for attaining magnesium alloys with different grain sizes and textures. The magnesium alloy with bimodal grain size distribution has increased mechanical properties than initial sample. The electron backscatter diffraction (EBSD) analysis shows that the dynamic recrystallization (DRX) affects the grain refinement and resulting hardness in AZ31B. Based on the experimental observations, a new theoretical model is put forward to describe the effect of DRX on materials during HSEM. Compared with the experimental measurements, the theoretical model is effective to predict the mechanical property of materials after HSEM.

  12. The development of vector based 2.5D print methods for a painting machine

    Science.gov (United States)

    Parraman, Carinna

    2013-02-01

    Through recent trends in the application of digitally printed decorative finishes to products, CAD, 3D additive layer manufacturing and research in material perception, [1, 2] there is a growing interest in the accurate rendering of materials and tangible displays. Although current advances in colour management and inkjet printing has meant that users can take for granted high-quality colour and resolution in their printed images, digital methods for transferring a photographic coloured image from screen to paper is constrained by pixel count, file size, colorimetric conversion between colour spaces and the gamut limits of input and output devices. This paper considers new approaches to applying alternative colour palettes by using a vector-based approach through the application of paint mixtures, towards what could be described as a 2.5D printing method. The objective is to not apply an image to a textured surface, but where texture and colour are integral to the mark, that like a brush, delineates the contours in the image. The paper describes the difference between the way inks and paints are mixed and applied. When transcribing the fluid appearance of a brush stroke, there is a difference between a halftone printed mark and a painted mark. The issue of surface quality is significant to subjective qualities when studying the appearance of ink or paint on paper. The paper provides examples of a range of vector marks that are then transcribed into brush stokes by the painting machine.

  13. Combined measurement system for double shield tunnel boring machine guidance based on optical and visual methods.

    Science.gov (United States)

    Lin, Jiarui; Gao, Kai; Gao, Yang; Wang, Zheng

    2017-10-01

    In order to detect the position of the cutting shield at the head of a double shield tunnel boring machine (TBM) during the excavation, this paper develops a combined measurement system which is mainly composed of several optical feature points, a monocular vision sensor, a laser target sensor, and a total station. The different elements of the combined system are mounted on the TBM in suitable sequence, and the position of the cutting shield in the reference total station frame is determined by coordinate transformations. Subsequently, the structure of the feature points and matching technique for them are expounded, the position measurement method based on monocular vision is presented, and the calibration methods for the unknown relationships among different parts of the system are proposed. Finally, a set of experimental platforms to simulate the double shield TBM is established, and accuracy verification experiments are conducted. Experimental results show that the mean deviation of the system is 6.8 mm, which satisfies the requirements of double shield TBM guidance.

  14. Extraction of Plant Physiological Status from Hyperspectral Signatures Using Machine Learning Methods

    Directory of Open Access Journals (Sweden)

    Daniel Doktor

    2014-12-01

    Full Text Available The machine learning method, random forest (RF, is applied in order to derive biophysical and structural vegetation parameters from hyperspectral signatures. Hyperspectral data are, among other things, characterized by their high dimensionality and autocorrelation. Common multivariate regression approaches, which usually include only a limited number of spectral indices as predictors, do not make full use of the available information. In contrast, machine learning methods, such as RF, are supposed to be better suited to extract information on vegetation status. First, vegetation parameters are extracted from hyperspectral signatures simulated with the radiative transfer model, PROSAIL. Second, the transferability of these results with respect to laboratory and field measurements is investigated. In situ observations of plant physiological parameters and corresponding spectra are gathered in the laboratory for summer barley (Hordeum vulgare. Field in situ measurements focus on winter crops over several growing seasons. Chlorophyll content, Leaf Area Index and phenological growth stages are derived from simulated and measured spectra. RF performs very robustly and with a very high accuracy on PROSAIL simulated data. Furthermore, it is almost unaffected by introduced noise and bias in the data. When applied to laboratory data, the prediction accuracy is still good (C\\(_{ab}\\: \\(R^2\\ = 0.94/ LAI: \\(R^2\\ = 0.80/BBCH (Growth stages of mono-and dicotyledonous plants : \\(R^2\\ = 0.91, but not as high as for simulated spectra. Transferability to field measurements is given with prediction levels as high as for laboratory data (C\\(_{ab}\\: \\(R^2\\ = 0.89/LAI: \\(R^2\\ = 0.89/BBCH: \\(R^2\\ = \\(\\sim\\0.8. Wavelengths for deriving plant physiological status based on simulated and measured hyperspectral signatures are mostly selected from appropriate spectral regions (both field and laboratory: 700–800 nm regressing on C\\(_{ab}\\ and 800–1300

  15. Parameter Identification of Ship Maneuvering Models Using Recursive Least Square Method Based on Support Vector Machines

    Directory of Open Access Journals (Sweden)

    Man Zhu

    2017-03-01

    Full Text Available Determination of ship maneuvering models is a tough task of ship maneuverability prediction. Among several prime approaches of estimating ship maneuvering models, system identification combined with the full-scale or free- running model test is preferred. In this contribution, real-time system identification programs using recursive identification method, such as the recursive least square method (RLS, are exerted for on-line identification of ship maneuvering models. However, this method seriously depends on the objects of study and initial values of identified parameters. To overcome this, an intelligent technology, i.e., support vector machines (SVM, is firstly used to estimate initial values of the identified parameters with finite samples. As real measured motion data of the Mariner class ship always involve noise from sensors and external disturbances, the zigzag simulation test data include a substantial quantity of Gaussian white noise. Wavelet method and empirical mode decomposition (EMD are used to filter the data corrupted by noise, respectively. The choice of the sample number for SVM to decide initial values of identified parameters is extensively discussed and analyzed. With de-noised motion data as input-output training samples, parameters of ship maneuvering models are estimated using RLS and SVM-RLS, respectively. The comparison between identification results and true values of parameters demonstrates that both the identified ship maneuvering models from RLS and SVM-RLS have reasonable agreements with simulated motions of the ship, and the increment of the sample for SVM positively affects the identification results. Furthermore, SVM-RLS using data de-noised by EMD shows the highest accuracy and best convergence.

  16. Research on the method of improving the accuracy of CMM (coordinate measuring machine) testing aspheric surface

    Science.gov (United States)

    Cong, Wang; Xu, Lingdi; Li, Ang

    2017-10-01

    Large aspheric surface which have the deviation with spherical surface are being used widely in various of optical systems. Compared with spherical surface, Large aspheric surfaces have lots of advantages, such as improving image quality, correcting aberration, expanding field of view, increasing the effective distance and make the optical system compact, lightweight. Especially, with the rapid development of space optics, space sensor resolution is required higher and viewing angle is requred larger. Aspheric surface will become one of the essential components in the optical system. After finishing Aspheric coarse Grinding surface profile error is about Tens of microns[1].In order to achieve the final requirement of surface accuracy,the aspheric surface must be quickly modified, high precision testing is the basement of rapid convergence of the surface error . There many methods on aspheric surface detection[2], Geometric ray detection, hartmann detection, ronchi text, knifeedge method, direct profile test, interferometry, while all of them have their disadvantage[6]. In recent years the measure of the aspheric surface become one of the import factors which are restricting the aspheric surface processing development. A two meter caliber industrial CMM coordinate measuring machine is avaiable, but it has many drawbacks such as large detection error and low repeatability precision in the measurement of aspheric surface coarse grinding , which seriously affects the convergence efficiency during the aspherical mirror processing. To solve those problems, this paper presents an effective error control, calibration and removal method by calibration mirror position of the real-time monitoring and other effective means of error control, calibration and removal by probe correction and the measurement mode selection method to measure the point distribution program development. This method verified by real engineer examples, this method increases the original industrial

  17. A Bayesian least-squares support vector machine method for predicting the remaining useful life of a microwave component

    Directory of Open Access Journals (Sweden)

    Fuqiang Sun

    2017-01-01

    Full Text Available Rapid and accurate lifetime prediction of critical components in a system is important to maintaining the system’s reliable operation. To this end, many lifetime prediction methods have been developed to handle various failure-related data collected in different situations. Among these methods, machine learning and Bayesian updating are the most popular ones. In this article, a Bayesian least-squares support vector machine method that combines least-squares support vector machine with Bayesian inference is developed for predicting the remaining useful life of a microwave component. A degradation model describing the change in the component’s power gain over time is developed, and the point and interval remaining useful life estimates are obtained considering a predefined failure threshold. In our case study, the radial basis function neural network approach is also implemented for comparison purposes. The results indicate that the Bayesian least-squares support vector machine method is more precise and stable in predicting the remaining useful life of this type of components.

  18. A method for the automatic separation of the images of galaxies and stars from measurements made with the COSMOS machine

    International Nuclear Information System (INIS)

    MacGillivray, H.T.; Martin, R.; Pratt, N.M.; Reddish, V.C.; Seddon, H.; Alexander, L.W.G.; Walker, G.S.; Williams, P.R.

    1976-01-01

    A method has been developed which allows the computer to distinguish automatically between the images of galaxies and those of stars from measurements made with the COSMOS automatic plate-measuring machine at the Royal Observatory, Edinburgh. Results have indicated that a 90 to 95 per cent separation between galaxies and stars is possible. (author)

  19. Bibliography of papers, reports, and presentations related to point-sample dimensional measurement methods for machined part evaluation

    Energy Technology Data Exchange (ETDEWEB)

    Baldwin, J.M. [Sandia National Labs., Livermore, CA (United States). Integrated Manufacturing Systems

    1996-04-01

    The Dimensional Inspection Techniques Specification (DITS) Project is an ongoing effort to produce tools and guidelines for optimum sampling and data analysis of machined parts, when measured using point-sample methods of dimensional metrology. This report is a compilation of results of a literature survey, conducted in support of the DITS. Over 160 citations are included, with author abstracts where available.

  20. A chord error conforming tool path B-spline fitting method for NC machining based on energy minimization and LSPIA

    OpenAIRE

    He, Shanshan; Ou, Daojiang; Yan, Changya; Lee, Chen-Han

    2015-01-01

    Piecewise linear (G01-based) tool paths generated by CAM systems lack G1 and G2 continuity. The discontinuity causes vibration and unnecessary hesitation during machining. To ensure efficient high-speed machining, a method to improve the continuity of the tool paths is required, such as B-spline fitting that approximates G01 paths with B-spline curves. Conventional B-spline fitting approaches cannot be directly used for tool path B-spline fitting, because they have shortages such as numerical...

  1. Soft computing in machine learning

    CERN Document Server

    Park, Jooyoung; Inoue, Atsushi

    2014-01-01

    As users or consumers are now demanding smarter devices, intelligent systems are revolutionizing by utilizing machine learning. Machine learning as part of intelligent systems is already one of the most critical components in everyday tools ranging from search engines and credit card fraud detection to stock market analysis. You can train machines to perform some things, so that they can automatically detect, diagnose, and solve a variety of problems. The intelligent systems have made rapid progress in developing the state of the art in machine learning based on smart and deep perception. Using machine learning, the intelligent systems make widely applications in automated speech recognition, natural language processing, medical diagnosis, bioinformatics, and robot locomotion. This book aims at introducing how to treat a substantial amount of data, to teach machines and to improve decision making models. And this book specializes in the developments of advanced intelligent systems through machine learning. It...

  2. Neuroanatomical heterogeneity of schizophrenia revealed by semi-supervised machine learning methods.

    Science.gov (United States)

    Honnorat, Nicolas; Dong, Aoyan; Meisenzahl-Lechner, Eva; Koutsouleris, Nikolaos; Davatzikos, Christos

    2017-12-20

    Schizophrenia is associated with heterogeneous clinical symptoms and neuroanatomical alterations. In this work, we aim to disentangle the patterns of neuroanatomical alterations underlying a heterogeneous population of patients using a semi-supervised clustering method. We apply this strategy to a cohort of patients with schizophrenia of varying extends of disease duration, and we describe the neuroanatomical, demographic and clinical characteristics of the subtypes discovered. We analyze the neuroanatomical heterogeneity of 157 patients diagnosed with Schizophrenia, relative to a control population of 169 subjects, using a machine learning method called CHIMERA. CHIMERA clusters the differences between patients and a demographically-matched population of healthy subjects, rather than clustering patients themselves, thereby specifically assessing disease-related neuroanatomical alterations. Voxel-Based Morphometry was conducted to visualize the neuroanatomical patterns associated with each group. The clinical presentation and the demographics of the groups were then investigated. Three subgroups were identified. The first two differed substantially, in that one involved predominantly temporal-thalamic-peri-Sylvian regions, whereas the other involved predominantly frontal regions and the thalamus. Both subtypes included primarily male patients. The third pattern was a mix of these two and presented milder neuroanatomic alterations and comprised a comparable number of men and women. VBM and statistical analyses suggest that these groups could correspond to different neuroanatomical dimensions of schizophrenia. Our analysis suggests that schizophrenia presents distinct neuroanatomical variants. This variability points to the need for a dimensional neuroanatomical approach using data-driven, mathematically principled multivariate pattern analysis methods, and should be taken into account in clinical studies. Copyright © 2017 Elsevier B.V. All rights reserved.

  3. Eddy current loss analysis of open-slot fault-tolerant permanent-magnet machines based on conformal mapping method

    Science.gov (United States)

    Ji, Jinghua; Luo, Jianhua; Lei, Qian; Bian, Fangfang

    2017-05-01

    This paper proposed an analytical method, based on conformal mapping (CM) method, for the accurate evaluation of magnetic field and eddy current (EC) loss in fault-tolerant permanent-magnet (FTPM) machines. The aim of modulation function, applied in CM method, is to change the open-slot structure into fully closed-slot structure, whose air-gap flux density is easy to calculate analytically. Therefore, with the help of Matlab Schwarz-Christoffel (SC) Toolbox, both the magnetic flux density and EC density of FTPM machine are obtained accurately. Finally, time-stepped transient finite-element method (FEM) is used to verify the theoretical analysis, showing that the proposed method is able to predict the magnetic flux density and EC loss precisely.

  4. Development of the pressure-time method as a relative and absolute method for low-head hydraulic machines

    Energy Technology Data Exchange (ETDEWEB)

    Jonsson, Pontus [Poeyry SwedPower AB, Stockholm (Sweden); Cervantes, Michel [Luleaa Univ. of Technology, Luleaa (Sweden)

    2013-02-15

    The pressure-time method is an absolute method common for flow measurements in power plants. The method determines the flow rate by measuring the pressure and estimating the losses between two sections in the penstock during a closure of the guide vanes. The method has limitations according to the IEC41 standard, which makes it difficult to use at Swedish plants where the head is generally low. This means that there is limited experience/knowledge in Sweden on this method, where the Winter-Kennedy is usually used. Since several years, Luleaa University of Technology works actively in the development of the pressure-time method for low-head hydraulic machines with encouraging results. Focus has been in decreasing the distance between both measuring sections and evaluation of the viscous losses. Measurements were performed on a pipe test rig (D=0.3 m) in a laboratory under well controlled conditions with 7method was tested as a relative method by measuring the pressure between the free surface and a section in the penstock without knowing the exact geometry, i.e., pipe factor. Such measurements may be simple to perform as most of the inlet spiral casings have pressure taps. Furthermore, the viscous losses do not need to be accurately determined as long as they are handled similarly between the measurements. The pressure-time method may thus become an alternative to the Winter-Kennedy.

  5. Improving the accuracy of myocardial perfusion scintigraphy results by machine learning method

    International Nuclear Information System (INIS)

    Groselj, C.; Kukar, M.

    2002-01-01

    Full text: Machine learning (ML) as rapidly growing artificial intelligence subfield has already proven in last decade to be a useful tool in many fields of decision making, also in some fields of medicine. Its decision accuracy usually exceeds the human one. To assess applicability of ML in interpretation the results of stress myocardial perfusion scintigraphy for CAD diagnosis. The 327 patient's data of planar stress myocardial perfusion scintigraphy were reevaluated in usual way. Comparing them with the results of coronary angiography the sensitivity, specificity and accuracy for the investigation was computed. The data were digitized and the decision procedure repeated by ML program 'Naive Bayesian classifier'. As the ML is able to simultaneously manipulate of whatever number of data, all reachable disease connected data (regarding history, habitus, risk factors, stress results) were added. The sensitivity, specificity and accuracy for scintigraphy were expressed in this way. The results of both decision procedures were compared. With ML method 19 patients more out of 327 (5.8 %) were correctly diagnosed by stress myocardial perfusion scintigraphy. ML could be an important tool for decision making in myocardial perfusion scintigraphy. (author)

  6. Machine vision method for online surface inspection of easy open can ends

    Science.gov (United States)

    Mariño, Perfecto; Pastoriza, Vicente; Santamaría, Miguel

    2006-10-01

    Easy open can end manufacturing process in the food canning sector currently makes use of a manual, non-destructive testing procedure to guarantee can end repair coating quality. This surface inspection is based on a visual inspection made by human inspectors. Due to the high production rate (100 to 500 ends per minute) only a small part of each lot is verified (statistical sampling), then an automatic, online, inspection system, based on machine vision, has been developed to improve this quality control. The inspection system uses a fuzzy model to make the acceptance/rejection decision for each can end from the information obtained by the vision sensor. In this work, the inspection method is presented. This surface inspection system checks the total production, classifies the ends in agreement with an expert human inspector, supplies interpretability to the operators in order to find out the failure causes and reduce mean time to repair during failures, and allows to modify the minimum can end repair coating quality.

  7. e-Bitter: Bitterant Prediction by the Consensus Voting From the Machine-Learning Methods.

    Science.gov (United States)

    Zheng, Suqing; Jiang, Mengying; Zhao, Chengwei; Zhu, Rui; Hu, Zhicheng; Xu, Yong; Lin, Fu

    2018-01-01

    In-silico bitterant prediction received the considerable attention due to the expensive and laborious experimental-screening of the bitterant. In this work, we collect the fully experimental dataset containing 707 bitterants and 592 non-bitterants, which is distinct from the fully or partially hypothetical non-bitterant dataset used in the previous works. Based on this experimental dataset, we harness the consensus votes from the multiple machine-learning methods (e.g., deep learning etc.) combined with the molecular fingerprint to build the bitter/bitterless classification models with five-fold cross-validation, which are further inspected by the Y-randomization test and applicability domain analysis. One of the best consensus models affords the accuracy, precision, specificity, sensitivity, F1-score, and Matthews correlation coefficient (MCC) of 0.929, 0.918, 0.898, 0.954, 0.936, and 0.856 respectively on our test set. For the automatic prediction of bitterant, a graphic program "e-Bitter" is developed for the convenience of users via the simple mouse click. To our best knowledge, it is for the first time to adopt the consensus model for the bitterant prediction and develop the first free stand-alone software for the experimental food scientist.

  8. Using Machine Learning Methods Jointly to Find Better Set of Rules in Data Mining

    Directory of Open Access Journals (Sweden)

    SUG Hyontai

    2017-01-01

    Full Text Available Rough set-based data mining algorithms are one of widely accepted machine learning technologies because of their strong mathematical background and capability of finding optimal rules based on given data sets only without room for prejudiced views to be inserted on the data. But, because the algorithms find rules very precisely, we may confront with the overfitting problem. On the other hand, association rule algorithms find rules of association, where the association resides between sets of items in database. The algorithms find itemsets that occur more than given minimum support, so that they can find the itemsets practically in reasonable time even for very large databases by supplying the minimum support appropriately. In order to overcome the problem of the overfitting problem in rough set-based algorithms, first we find large itemsets, after that we select attributes that cover the large itemsets. By using the selected attributes only, we may find better set of rules based on rough set theory. Results from experiments support our suggested method.

  9. e-Bitter: Bitterant Prediction by the Consensus Voting From the Machine-Learning Methods

    Directory of Open Access Journals (Sweden)

    Suqing Zheng

    2018-03-01

    Full Text Available In-silico bitterant prediction received the considerable attention due to the expensive and laborious experimental-screening of the bitterant. In this work, we collect the fully experimental dataset containing 707 bitterants and 592 non-bitterants, which is distinct from the fully or partially hypothetical non-bitterant dataset used in the previous works. Based on this experimental dataset, we harness the consensus votes from the multiple machine-learning methods (e.g., deep learning etc. combined with the molecular fingerprint to build the bitter/bitterless classification models with five-fold cross-validation, which are further inspected by the Y-randomization test and applicability domain analysis. One of the best consensus models affords the accuracy, precision, specificity, sensitivity, F1-score, and Matthews correlation coefficient (MCC of 0.929, 0.918, 0.898, 0.954, 0.936, and 0.856 respectively on our test set. For the automatic prediction of bitterant, a graphic program “e-Bitter” is developed for the convenience of users via the simple mouse click. To our best knowledge, it is for the first time to adopt the consensus model for the bitterant prediction and develop the first free stand-alone software for the experimental food scientist.

  10. Integrating Symbolic and Statistical Methods for Testing Intelligent Systems Applications to Machine Learning and Computer Vision

    Energy Technology Data Exchange (ETDEWEB)

    Jha, Sumit Kumar [University of Central Florida, Orlando; Pullum, Laura L [ORNL; Ramanathan, Arvind [ORNL

    2016-01-01

    Embedded intelligent systems ranging from tiny im- plantable biomedical devices to large swarms of autonomous un- manned aerial systems are becoming pervasive in our daily lives. While we depend on the flawless functioning of such intelligent systems, and often take their behavioral correctness and safety for granted, it is notoriously difficult to generate test cases that expose subtle errors in the implementations of machine learning algorithms. Hence, the validation of intelligent systems is usually achieved by studying their behavior on representative data sets, using methods such as cross-validation and bootstrapping.In this paper, we present a new testing methodology for studying the correctness of intelligent systems. Our approach uses symbolic decision procedures coupled with statistical hypothesis testing to. We also use our algorithm to analyze the robustness of a human detection algorithm built using the OpenCV open-source computer vision library. We show that the human detection implementation can fail to detect humans in perturbed video frames even when the perturbations are so small that the corresponding frames look identical to the naked eye.

  11. Prediction of Backbreak in Open-Pit Blasting Operations Using the Machine Learning Method

    Science.gov (United States)

    Khandelwal, Manoj; Monjezi, M.

    2013-03-01

    Backbreak is an undesirable phenomenon in blasting operations. It can cause instability of mine walls, falling down of machinery, improper fragmentation, reduced efficiency of drilling, etc. The existence of various effective parameters and their unknown relationships are the main reasons for inaccuracy of the empirical models. Presently, the application of new approaches such as artificial intelligence is highly recommended. In this paper, an attempt has been made to predict backbreak in blasting operations of Soungun iron mine, Iran, incorporating rock properties and blast design parameters using the support vector machine (SVM) method. To investigate the suitability of this approach, the predictions by SVM have been compared with multivariate regression analysis (MVRA). The coefficient of determination (CoD) and the mean absolute error (MAE) were taken as performance measures. It was found that the CoD between measured and predicted backbreak was 0.987 and 0.89 by SVM and MVRA, respectively, whereas the MAE was 0.29 and 1.07 by SVM and MVRA, respectively.

  12. Tunnelling support methods and their possible application to machine rock face excavation in coal mining

    Energy Technology Data Exchange (ETDEWEB)

    Maidl, B.; Edeling, H.

    1981-06-11

    Mechanized pushing through the rocks is possible even in teary rock if protective measures are taken directly behind the drill bit. Present arch-type supports are best reinforced with sprayed concrete as it will take up rock deformations. In this case, however, the question soon arises whether arch-type steel supports should be used at all. So far, mature solutions have not been found but they will be possible if the mining industry is really interested. Sprayed concrete with admixtures of reinforcing steel fibers plays a major role here as it will protect miner's heads already at an early stage and is suitable as support even at a later stage. Equally interesting would be reinforced concrete pumped behind advancing formwork. A combination of both techniques may turn out to be the most suitable method to replace arch-type supports. A problem of particular importance is machine bracing in the fresh concrete lining. If the concrete is filled in directly behind the drill bit, it is only 4 to 6 h old when it reaches the bracing device, i.e., its pressure resistance is lower than the contact pressure of present mining machinery. It may be difficult to find a solution here but it is considered to be possible. With shell concrete, the formwork should be constructed so as to withstand the contact pressure.

  13. Improving Hip-Worn Accelerometer Estimates of Sitting Using Machine Learning Methods.

    Science.gov (United States)

    Kerr, Jacqueline; Carlson, Jordan; Godbole, Suneeta; Cadmus-Bertram, Lisa; Bellettiere, John; Hartman, Sheri

    2018-02-13

    To improve estimates of sitting time from hip worn accelerometers used in large cohort studies by employing machine learning methods developed on free living activPAL data. Thirty breast cancer survivors concurrently wore a hip worn accelerometer and a thigh worn activPAL for 7 days. A random forest classifier, trained on the activPAL data, was employed to detect sitting, standing and sit-stand transitions in 5 second windows in the hip worn accelerometer. The classifier estimates were compared to the standard accelerometer cut point and significant differences across different bout lengths were investigated using mixed effect models. Overall, the algorithm predicted the postures with moderate accuracy (stepping 77%, standing 63%, sitting 67%, sit to stand 52% and stand to sit 51%). Daily level analyses indicated that errors in transition estimates were only occurring during sitting bouts of 2 minutes or less. The standard cut point was significantly different from the activPAL across all bout lengths, overestimating short bouts and underestimating long bouts. This is among the first algorithms for sitting and standing for hip worn accelerometer data to be trained from entirely free living activPAL data. The new algorithm detected prolonged sitting which has been shown to be most detrimental to health. Further validation and training in larger cohorts is warranted.This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

  14. Yield Estimation of Sugar Beet Based on Plant Canopy Using Machine Vision Methods

    Directory of Open Access Journals (Sweden)

    S Latifaltojar

    2014-09-01

    Full Text Available Crop yield estimation is one of the most important parameters for information and resources management in precision agriculture. This information is employed for optimizing the field inputs for successive cultivations. In the present study, the feasibility of sugar beet yield estimation by means of machine vision was studied. For the field experiments stripped images were taken during the growth season with one month intervals. The image of horizontal view of plants canopy was prepared at the end of each month. At the end of growth season, beet roots were harvested and the correlation between the sugar beet canopy in each month of growth period and corresponding weight of the roots were investigated. Results showed that there was a strong correlation between the beet yield and green surface area of autumn cultivated sugar beets. The highest coefficient of determination was 0.85 at three months before harvest. In order to assess the accuracy of the final model, the second year of study was performed with the same methodology. The results depicted a strong relationship between the actual and estimated beet weights with R2=0.94. The model estimated beet yield with about 9 percent relative error. It is concluded that this method has appropriate potential for estimation of sugar beet yield based on band imaging prior to harvest

  15. e-Bitter: Bitterant Prediction by the Consensus Voting From the Machine-learning Methods

    Science.gov (United States)

    Zheng, Suqing; Jiang, Mengying; Zhao, Chengwei; Zhu, Rui; Hu, Zhicheng; Xu, Yong; Lin, Fu

    2018-03-01

    In-silico bitterant prediction received the considerable attention due to the expensive and laborious experimental-screening of the bitterant. In this work, we collect the fully experimental dataset containing 707 bitterants and 592 non-bitterants, which is distinct from the fully or partially hypothetical non-bitterant dataset used in the previous works. Based on this experimental dataset, we harness the consensus votes from the multiple machine-learning methods (e.g., deep learning etc.) combined with the molecular fingerprint to build the bitter/bitterless classification models with five-fold cross-validation, which are further inspected by the Y-randomization test and applicability domain analysis. One of the best consensus models affords the accuracy, precision, specificity, sensitivity, F1-score, and Matthews correlation coefficient (MCC) of 0.929, 0.918, 0.898, 0.954, 0.936, and 0.856 respectively on our test set. For the automatic prediction of bitterant, a graphic program “e-Bitter” is developed for the convenience of users via the simple mouse click. To our best knowledge, it is for the first time to adopt the consensus model for the bitterant prediction and develop the first free stand-alone software for the experimental food scientist.

  16. Prediction of Aerosol Optical Depth in West Asia: Machine Learning Methods versus Numerical Models

    Science.gov (United States)

    Omid Nabavi, Seyed; Haimberger, Leopold; Abbasi, Reyhaneh; Samimi, Cyrus

    2017-04-01

    Dust-prone areas of West Asia are releasing increasingly large amounts of dust particles during warm months. Because of the lack of ground-based observations in the region, this phenomenon is mainly monitored through remotely sensed aerosol products. The recent development of mesoscale Numerical Models (NMs) has offered an unprecedented opportunity to predict dust emission, and, subsequently Aerosol Optical Depth (AOD), at finer spatial and temporal resolutions. Nevertheless, the significant uncertainties in input data and simulations of dust activation and transport limit the performance of numerical models in dust prediction. The presented study aims to evaluate if machine-learning algorithms (MLAs), which require much less computational expense, can yield the same or even better performance than NMs. Deep blue (DB) AOD, which is observed by satellites but also predicted by MLAs and NMs, is used for validation. We concentrate our evaluations on the over dry Iraq plains, known as the main origin of recently intensified dust storms in West Asia. Here we examine the performance of four MLAs including Linear regression Model (LM), Support Vector Machine (SVM), Artificial Neural Network (ANN), Multivariate Adaptive Regression Splines (MARS). The Weather Research and Forecasting model coupled to Chemistry (WRF-Chem) and the Dust REgional Atmosphere Model (DREAM) are included as NMs. The MACC aerosol re-analysis of European Centre for Medium-range Weather Forecast (ECMWF) is also included, although it has assimilated satellite-based AOD data. Using the Recursive Feature Elimination (RFE) method, nine environmental features including soil moisture and temperature, NDVI, dust source function, albedo, dust uplift potential, vertical velocity, precipitation and 9-month SPEI drought index are selected for dust (AOD) modeling by MLAs. During the feature selection process, we noticed that NDVI and SPEI are of the highest importance in MLAs predictions. The data set was divided

  17. On Intelligent Design and Planning Method of Process Route Based on Gun Breech Machining Process

    Science.gov (United States)

    Hongzhi, Zhao; Jian, Zhang

    2018-03-01

    The paper states an approach of intelligent design and planning of process route based on gun breech machining process, against several problems, such as complex machining process of gun breech, tedious route design and long period of its traditional unmanageable process route. Based on gun breech machining process, intelligent design and planning system of process route are developed by virtue of DEST and VC++. The system includes two functional modules--process route intelligent design and its planning. The process route intelligent design module, through the analysis of gun breech machining process, summarizes breech process knowledge so as to complete the design of knowledge base and inference engine. And then gun breech process route intelligently output. On the basis of intelligent route design module, the final process route is made, edited and managed in the process route planning module.

  18. Methods and Research for Multi-Component Cutting Force Sensing Devices and Approaches in Machining

    Directory of Open Access Journals (Sweden)

    Qiaokang Liang

    2016-11-01

    Full Text Available Multi-component cutting force sensing systems in manufacturing processes applied to cutting tools are gradually becoming the most significant monitoring indicator. Their signals have been extensively applied to evaluate the machinability of workpiece materials, predict cutter breakage, estimate cutting tool wear, control machine tool chatter, determine stable machining parameters, and improve surface finish. Robust and effective sensing systems with capability of monitoring the cutting force in machine operations in real time are crucial for realizing the full potential of cutting capabilities of computer numerically controlled (CNC tools. The main objective of this paper is to present a brief review of the existing achievements in the field of multi-component cutting force sensing systems in modern manufacturing.

  19. Methods and Research for Multi-Component Cutting Force Sensing Devices and Approaches in Machining.

    Science.gov (United States)

    Liang, Qiaokang; Zhang, Dan; Wu, Wanneng; Zou, Kunlin

    2016-11-16

    Multi-component cutting force sensing systems in manufacturing processes applied to cutting tools are gradually becoming the most significant monitoring indicator. Their signals have been extensively applied to evaluate the machinability of workpiece materials, predict cutter breakage, estimate cutting tool wear, control machine tool chatter, determine stable machining parameters, and improve surface finish. Robust and effective sensing systems with capability of monitoring the cutting force in machine operations in real time are crucial for realizing the full potential of cutting capabilities of computer numerically controlled (CNC) tools. The main objective of this paper is to present a brief review of the existing achievements in the field of multi-component cutting force sensing systems in modern manufacturing.

  20. Performances of the PCA method in electrical machines diagnosis using Matlab

    OpenAIRE

    Ramahaleomiarantsoa , J.F.; Sambatra , Eric Jean Roy; Heraud , Nicolas; Razafimahenina , Jean Marie

    2012-01-01

    Nowadays, faults diagnosis is almost an inevitable step to be maintained in the optimal safety operating of every physical system. Electrical machines, main elements of every electromechanical system, are among the research topics of many academic and industrial laboratories because of the importance of their roles in the industrial process. Lots of technologies of these machines are old and well controlled. However, they remain the seat of several electrical and mechanical faults [1-4]. Thus...

  1. Comparison of Deep Learning With Multiple Machine Learning Methods and Metrics Using Diverse Drug Discovery Data Sets.

    Science.gov (United States)

    Korotcov, Alexandru; Tkachenko, Valery; Russo, Daniel P; Ekins, Sean

    2017-12-04

    Machine learning methods have been applied to many data sets in pharmaceutical research for several decades. The relative ease and availability of fingerprint type molecular descriptors paired with Bayesian methods resulted in the widespread use of this approach for a diverse array of end points relevant to drug discovery. Deep learning is the latest machine learning algorithm attracting attention for many of pharmaceutical applications from docking to virtual screening. Deep learning is based on an artificial neural network with multiple hidden layers and has found considerable traction for many artificial intelligence applications. We have previously suggested the need for a comparison of different machine learning methods with deep learning across an array of varying data sets that is applicable to pharmaceutical research. End points relevant to pharmaceutical research include absorption, distribution, metabolism, excretion, and toxicity (ADME/Tox) properties, as well as activity against pathogens and drug discovery data sets. In this study, we have used data sets for solubility, probe-likeness, hERG, KCNQ1, bubonic plague, Chagas, tuberculosis, and malaria to compare different machine learning methods using FCFP6 fingerprints. These data sets represent whole cell screens, individual proteins, physicochemical properties as well as a data set with a complex end point. Our aim was to assess whether deep learning offered any improvement in testing when assessed using an array of metrics including AUC, F1 score, Cohen's kappa, Matthews correlation coefficient and others. Based on ranked normalized scores for the metrics or data sets Deep Neural Networks (DNN) ranked higher than SVM, which in turn was ranked higher than all the other machine learning methods. Visualizing these properties for training and test sets using radar type plots indicates when models are inferior or perhaps over trained. These results also suggest the need for assessing deep learning further

  2. Optimization of Surface Finish in Turning Operation by Considering the Machine Tool Vibration using Taguchi Method

    Directory of Open Access Journals (Sweden)

    Muhammad Munawar

    2012-01-01

    Full Text Available Optimization of surface roughness has been one of the primary objectives in most of the machining operations. Poor control on the desired surface roughness generates non conforming parts and results into increase in cost and loss of productivity due to rework or scrap. Surface roughness value is a result of several process variables among which machine tool condition is one of the significant variables. In this study, experimentation was carried out to investigate the effect of machine tool condition on surface roughness. Variable used to represent machine tool\\'s condition was vibration amplitude. Input parameters used, besides vibration amplitude, were feed rate and insert nose radius. Cutting speed and depth of cut were kept constant. Based on Taguchi orthogonal array, a series of experimentation was designed and performed on AISI 1040 carbon steel bar at default and induced machine tool\\'s vibration amplitudes. ANOVA (Analysis of Variance, revealed that vibration amplitude and feed rate had moderate effect on the surface roughness and insert nose radius had the highest significant effect on the surface roughness. It was also found that a machine tool with low vibration amplitude produced better surface roughness. Insert with larger nose radius produced better surface roughness at low feed rate.

  3. Feature-Free Activity Classification of Inertial Sensor Data With Machine Vision Techniques: Method, Development, and Evaluation.

    Science.gov (United States)

    Dominguez Veiga, Jose Juan; O'Reilly, Martin; Whelan, Darragh; Caulfield, Brian; Ward, Tomas E

    2017-08-04

    Inertial sensors are one of the most commonly used sources of data for human activity recognition (HAR) and exercise detection (ED) tasks. The time series produced by these sensors are generally analyzed through numerical methods. Machine learning techniques such as random forests or support vector machines are popular in this field for classification efforts, but they need to be supported through the isolation of a potentially large number of additionally crafted features derived from the raw data. This feature preprocessing step can involve nontrivial digital signal processing (DSP) techniques. However, in many cases, the researchers interested in this type of activity recognition problems do not possess the necessary technical background for this feature-set development. The study aimed to present a novel application of established machine vision methods to provide interested researchers with an easier entry path into the HAR and ED fields. This can be achieved by removing the need for deep DSP skills through the use of transfer learning. This can be done by using a pretrained convolutional neural network (CNN) developed for machine vision purposes for exercise classification effort. The new method should simply require researchers to generate plots of the signals that they would like to build classifiers with, store them as images, and then place them in folders according to their training label before retraining the network. We applied a CNN, an established machine vision technique, to the task of ED. Tensorflow, a high-level framework for machine learning, was used to facilitate infrastructure needs. Simple time series plots generated directly from accelerometer and gyroscope signals are used to retrain an openly available neural network (Inception), originally developed for machine vision tasks. Data from 82 healthy volunteers, performing 5 different exercises while wearing a lumbar-worn inertial measurement unit (IMU), was collected. The ability of the

  4. A MACHINE-LEARNING METHOD TO INFER FUNDAMENTAL STELLAR PARAMETERS FROM PHOTOMETRIC LIGHT CURVES

    International Nuclear Information System (INIS)

    Miller, A. A.; Bloom, J. S.; Richards, J. W.; Starr, D. L.; Lee, Y. S.; Butler, N. R.; Tokarz, S.; Smith, N.; Eisner, J. A.

    2015-01-01

    A fundamental challenge for wide-field imaging surveys is obtaining follow-up spectroscopic observations: there are >10 9 photometrically cataloged sources, yet modern spectroscopic surveys are limited to ∼few× 10 6 targets. As we approach the Large Synoptic Survey Telescope era, new algorithmic solutions are required to cope with the data deluge. Here we report the development of a machine-learning framework capable of inferring fundamental stellar parameters (T eff , log g, and [Fe/H]) using photometric-brightness variations and color alone. A training set is constructed from a systematic spectroscopic survey of variables with Hectospec/Multi-Mirror Telescope. In sum, the training set includes ∼9000 spectra, for which stellar parameters are measured using the SEGUE Stellar Parameters Pipeline (SSPP). We employed the random forest algorithm to perform a non-parametric regression that predicts T eff , log g, and [Fe/H] from photometric time-domain observations. Our final optimized model produces a cross-validated rms error (RMSE) of 165 K, 0.39 dex, and 0.33 dex for T eff , log g, and [Fe/H], respectively. Examining the subset of sources for which the SSPP measurements are most reliable, the RMSE reduces to 125 K, 0.37 dex, and 0.27 dex, respectively, comparable to what is achievable via low-resolution spectroscopy. For variable stars this represents a ≈12%-20% improvement in RMSE relative to models trained with single-epoch photometric colors. As an application of our method, we estimate stellar parameters for ∼54,000 known variables. We argue that this method may convert photometric time-domain surveys into pseudo-spectrographic engines, enabling the construction of extremely detailed maps of the Milky Way, its structure, and history

  5. Comparison of Machine Learning methods for incipient motion in gravel bed rivers

    Science.gov (United States)

    Valyrakis, Manousos

    2013-04-01

    Soil erosion and sediment transport of natural gravel bed streams are important processes which affect both the morphology as well as the ecology of earth's surface. For gravel bed rivers at near incipient flow conditions, particle entrainment dynamics are highly intermittent. This contribution reviews the use of modern Machine Learning (ML) methods implemented for short term prediction of entrainment instances of individual grains exposed in fully developed near boundary turbulent flows. Results obtained by network architectures of variable complexity based on two different ML methods namely the Artificial Neural Network (ANN) and the Adaptive Neuro-Fuzzy Inference System (ANFIS) are compared in terms of different error and performance indices, computational efficiency and complexity as well as predictive accuracy and forecast ability. Different model architectures are trained and tested with experimental time series obtained from mobile particle flume experiments. The experimental setup consists of a Laser Doppler Velocimeter (LDV) and a laser optics system, which acquire data for the instantaneous flow and particle response respectively, synchronously. The first is used to record the flow velocity components directly upstream of the test particle, while the later tracks the particle's displacements. The lengthy experimental data sets (millions of data points) are split into the training and validation subsets used to perform the corresponding learning and testing of the models. It is demonstrated that the ANFIS hybrid model, which is based on neural learning and fuzzy inference principles, better predicts the critical flow conditions above which sediment transport is initiated. In addition, it is illustrated that empirical knowledge can be extracted, validating the theoretical assumption that particle ejections occur due to energetic turbulent flow events. Such a tool may find application in management and regulation of stream flows downstream of dams for stream

  6. Recognition of Time Stamps on Full-Disk Hα Images Using Machine Learning Methods

    Science.gov (United States)

    Xu, Y.; Huang, N.; Jing, J.; Liu, C.; Wang, H.; Fu, G.

    2016-12-01

    Observation and understanding of the physics of the 11-year solar activity cycle and 22-year magnetic cycle are among the most important research topics in solar physics. The solar cycle is responsible for magnetic field and particle fluctuation in the near-earth environment that have been found increasingly important in affecting the living of human beings in the modern era. A systematic study of large-scale solar activities, as made possible by our rich data archive, will further help us to understand the global-scale magnetic fields that are closely related to solar cycles. The long-time-span data archive includes both full-disk and high-resolution Hα images. Prior to the widely use of CCD cameras in 1990s, 35-mm films were the major media to store images. The research group at NJIT recently finished the digitization of film data obtained by the National Solar Observatory (NSO) and Big Bear Solar Observatory (BBSO) covering the period of 1953 to 2000. The total volume of data exceeds 60 TB. To make this huge database scientific valuable, some processing and calibration are required. One of the most important steps is to read the time stamps on all of the 14 million images, which is almost impossible to be done manually. We implemented three different methods to recognize the time stamps automatically, including Optical Character Recognition (OCR), Classification Tree and TensorFlow. The latter two are known as machine learning algorithms which are very popular now a day in pattern recognition area. We will present some sample images and the results of clock recognition from all three methods.

  7. Predictive ability of machine learning methods for massive crop yield prediction

    Directory of Open Access Journals (Sweden)

    Alberto Gonzalez-Sanchez

    2014-04-01

    Full Text Available An important issue for agricultural planning purposes is the accurate yield estimation for the numerous crops involved in the planning. Machine learning (ML is an essential approach for achieving practical and effective solutions for this problem. Many comparisons of ML methods for yield prediction have been made, seeking for the most accurate technique. Generally, the number of evaluated crops and techniques is too low and does not provide enough information for agricultural planning purposes. This paper compares the predictive accuracy of ML and linear regression techniques for crop yield prediction in ten crop datasets. Multiple linear regression, M5-Prime regression trees, perceptron multilayer neural networks, support vector regression and k-nearest neighbor methods were ranked. Four accuracy metrics were used to validate the models: the root mean square error (RMS, root relative square error (RRSE, normalized mean absolute error (MAE, and correlation factor (R. Real data of an irrigation zone of Mexico were used for building the models. Models were tested with samples of two consecutive years. The results show that M5-Prime and k-nearest neighbor techniques obtain the lowest average RMSE errors (5.14 and 4.91, the lowest RRSE errors (79.46% and 79.78%, the lowest average MAE errors (18.12% and 19.42%, and the highest average correlation factors (0.41 and 0.42. Since M5-Prime achieves the largest number of crop yield models with the lowest errors, it is a very suitable tool for massive crop yield prediction in agricultural planning.

  8. Using Standard-Sole Cost Method for Performance Gestion Accounting and Calculation Cost in the Machine Building Industry

    Directory of Open Access Journals (Sweden)

    Cleopatra Sendroiu

    2006-07-01

    Full Text Available The main purpose of improving and varying cost calculation methods in the machine building industry is to make them more operational and efficient in supplying the information necessary to the management in taking its decisions. The present cost calculation methods used in the machine building plants - global method and the method per orders - by which a historical cost is determined a posteriori used in deducting and post factum justification of manufacturing expenses does not offer the management the possibility to fully satisfy its need for information. We are talking about a change of conception in applying certain systems, methods and work techniques, according to the needs of efficient administration of production and the plant seen as a whole. The standard-cost method best answers to the needs of the effective management of the value side of the manufacturing process and raising economic efficiency. We consider that, in the machine building industry, these objectives can be achieved by using the standard - sole cost alternative of the standard-cost method.

  9. Using Standard-Sole Cost Method for Performance Gestion Accounting and Calculation Cost in the Machine Building Industry

    Directory of Open Access Journals (Sweden)

    Aureliana Geta Roman

    2006-09-01

    Full Text Available The main purpose of improving and varying cost calculation methods in the machine building industry is to make them more operational and efficient in supplying the information necessary to the management in taking its decisions. The present cost calculation methods used in the machine building plants – global method and the method per orders – by which a historical cost is determined a posteriori used in deducting and post factum justification of manufacturing expenses does not offer the management the possibility to fully satisfy its need for information. We are talking about a change of conception in applying certain systems, methods and work techniques, according to the needs of efficient administration of production and the plant seen as a whole. The standard-cost method best answers to the needs of the effective management of the value side of the manufacturing process and raising economic efficiency. We consider that, in the machine building industry, these objectives can be achieved by using the standard - sole cost alternative of the standard-cost method.

  10. Methodes de compensation des erreurs d'usinage utilisant la mesure sur machines-outils

    Science.gov (United States)

    Guiassa, Rachid

    On-machine measurement process is used to inspect the part immediately after the cut without part removal and additional setups. It detects the machining defects visible to the machine tool. The system machine-tool-part deflection and the cutting tool dimension inaccuracy are the most important sources of these defects. The machined part can be inspected, at the semi-finishing cut level to identify systematic defects that may occur later at the finishing cut. Therefore, corrective actions can be derived to anticipate the expected error in order to produce a part with acceptable accuracy. For industrial profitability, the measurement and the compensation tasks must be done under the closed door machining requirement without human interventions. This thesis aims to develop mathematical models that use the data inspection of previous cuts to formulate the compensation of the finishing-cut. The goal of the compensation is to anticipate the expected error which is identified under two components. One is independent on the depth of cut and is related to the cutting tool dimension such as the wear. The other is dependent on the cutting depth such as the deflection. A general model is presented which relies solely on-machine probing data from semi-finishing cuts to compensate the final cut. A variable cutting compliance coefficient relates the total system deflection to the depth of cut in multi-cut process. It is used to estimate the compensation of the tool path. The model is able to take into account the effect of the cutting depth variation and the material removal in the estimation of the error at the finishing-cut. In order to generate the continuous compensated tool path from discrete measurements, a B-Spline deformation technique is adapted to the available data and applied to compute the compensated tool path according to a restricted number of discrete compensation vectors. The results show that the on-machine probed errors can be significantly reduced using the

  11. Prediction of interactions between viral and host proteins using supervised machine learning methods.

    Directory of Open Access Journals (Sweden)

    Ranjan Kumar Barman

    Full Text Available BACKGROUND: Viral-host protein-protein interaction plays a vital role in pathogenesis, since it defines viral infection of the host and regulation of the host proteins. Identification of key viral-host protein-protein interactions (PPIs has great implication for therapeutics. METHODS: In this study, a systematic attempt has been made to predict viral-host PPIs by integrating different features, including domain-domain association, network topology and sequence information using viral-host PPIs from VirusMINT. The three well-known supervised machine learning methods, such as SVM, Naïve Bayes and Random Forest, which are commonly used in the prediction of PPIs, were employed to evaluate the performance measure based on five-fold cross validation techniques. RESULTS: Out of 44 descriptors, best features were found to be domain-domain association and methionine, serine and valine amino acid composition of viral proteins. In this study, SVM-based method achieved better sensitivity of 67% over Naïve Bayes (37.49% and Random Forest (55.66%. However the specificity of Naïve Bayes was the highest (99.52% as compared with SVM (74% and Random Forest (89.08%. Overall, the SVM and Random Forest achieved accuracy of 71% and 72.41%, respectively. The proposed SVM-based method was evaluated on blind dataset and attained a sensitivity of 64%, specificity of 83%, and accuracy of 74%. In addition, unknown potential targets of hepatitis B virus-human and hepatitis E virus-human PPIs have been predicted through proposed SVM model and validated by gene ontology enrichment analysis. Our proposed model shows that, hepatitis B virus "C protein" binds to membrane docking protein, while "X protein" and "P protein" interacts with cell-killing and metabolic process proteins, respectively. CONCLUSION: The proposed method can predict large scale interspecies viral-human PPIs. The nature and function of unknown viral proteins (HBV and HEV, interacting partners of host

  12. A machine learning approach to the accurate prediction of monitor units for a compact proton machine.

    Science.gov (United States)

    Sun, Baozhou; Lam, Dao; Yang, Deshan; Grantham, Kevin; Zhang, Tiezhi; Mutic, Sasa; Zhao, Tianyu

    2018-05-01

    Clinical treatment planning systems for proton therapy currently do not calculate monitor units (MUs) in passive scatter proton therapy due to the complexity of the beam delivery systems. Physical phantom measurements are commonly employed to determine the field-specific output factors (OFs) but are often subject to limited machine time, measurement uncertainties and intensive labor. In this study, a machine learning-based approach was developed to predict output (cGy/MU) and derive MUs, incorporating the dependencies on gantry angle and field size for a single-room proton therapy system. The goal of this study was to develop a secondary check tool for OF measurements and eventually eliminate patient-specific OF measurements. The OFs of 1754 fields previously measured in a water phantom with calibrated ionization chambers and electrometers for patient-specific fields with various range and modulation width combinations for 23 options were included in this study. The training data sets for machine learning models in three different methods (Random Forest, XGBoost and Cubist) included 1431 (~81%) OFs. Ten-fold cross-validation was used to prevent "overfitting" and to validate each model. The remaining 323 (~19%) OFs were used to test the trained models. The difference between the measured and predicted values from machine learning models was analyzed. Model prediction accuracy was also compared with that of the semi-empirical model developed by Kooy (Phys. Med. Biol. 50, 2005). Additionally, gantry angle dependence of OFs was measured for three groups of options categorized on the selection of the second scatters. Field size dependence of OFs was investigated for the measurements with and without patient-specific apertures. All three machine learning methods showed higher accuracy than the semi-empirical model which shows considerably large discrepancy of up to 7.7% for the treatment fields with full range and full modulation width. The Cubist-based solution

  13. Computer-Aided Diagnosis for Breast Ultrasound Using Computerized BI-RADS Features and Machine Learning Methods.

    Science.gov (United States)

    Shan, Juan; Alam, S Kaisar; Garra, Brian; Zhang, Yingtao; Ahmed, Tahira

    2016-04-01

    This work identifies effective computable features from the Breast Imaging Reporting and Data System (BI-RADS), to develop a computer-aided diagnosis (CAD) system for breast ultrasound. Computerized features corresponding to ultrasound BI-RADs categories were designed and tested using a database of 283 pathology-proven benign and malignant lesions. Features were selected based on classification performance using a "bottom-up" approach for different machine learning methods, including decision tree, artificial neural network, random forest and support vector machine. Using 10-fold cross-validation on the database of 283 cases, the highest area under the receiver operating characteristic (ROC) curve (AUC) was 0.84 from a support vector machine with 77.7% overall accuracy; the highest overall accuracy, 78.5%, was from a random forest with the AUC 0.83. Lesion margin and orientation were optimum features common to all of the different machine learning methods. These features can be used in CAD systems to help distinguish benign from worrisome lesions. Copyright © 2016 World Federation for Ultrasound in Medicine & Biology. All rights reserved.

  14. Multipolar electrostatics based on the Kriging machine learning method: an application to serine.

    Science.gov (United States)

    Yuan, Yongna; Mills, Matthew J L; Popelier, Paul L A

    2014-04-01

    A multipolar, polarizable electrostatic method for future use in a novel force field is described. Quantum Chemical Topology (QCT) is used to partition the electron density of a chemical system into atoms, then the machine learning method Kriging is used to build models that relate the multipole moments of the atoms to the positions of their surrounding nuclei. The pilot system serine is used to study both the influence of the level of theory and the set of data generator methods used. The latter consists of: (i) sampling of protein structures deposited in the Protein Data Bank (PDB), or (ii) normal mode distortion along either (a) Cartesian coordinates, or (b) redundant internal coordinates. Wavefunctions for the sampled geometries were obtained at the HF/6-31G(d,p), B3LYP/apc-1, and MP2/cc-pVDZ levels of theory, prior to calculation of the atomic multipole moments by volume integration. The average absolute error (over an independent test set of conformations) in the total atom-atom electrostatic interaction energy of serine, using Kriging models built with the three data generator methods is 11.3 kJ mol⁻¹ (PDB), 8.2 kJ mol⁻¹ (Cartesian distortion), and 10.1 kJ mol⁻¹ (redundant internal distortion) at the HF/6-31G(d,p) level. At the B3LYP/apc-1 level, the respective errors are 7.7 kJ mol⁻¹, 6.7 kJ mol⁻¹, and 4.9 kJ mol⁻¹, while at the MP2/cc-pVDZ level they are 6.5 kJ mol⁻¹, 5.3 kJ mol⁻¹, and 4.0 kJ mol⁻¹. The ranges of geometries generated by the redundant internal coordinate distortion and by extraction from the PDB are much wider than the range generated by Cartesian distortion. The atomic multipole moment and electrostatic interaction energy predictions for the B3LYP/apc-1 and MP2/cc-pVDZ levels are similar, and both are better than the corresponding predictions at the HF/6-31G(d,p) level.

  15. Automating Construction of Machine Learning Models With Clinical Big Data: Proposal Rationale and Methods.

    Science.gov (United States)

    Luo, Gang; Stone, Bryan L; Johnson, Michael D; Tarczy-Hornoch, Peter; Wilcox, Adam B; Mooney, Sean D; Sheng, Xiaoming; Haug, Peter J; Nkoy, Flory L

    2017-08-29

    To improve health outcomes and cut health care costs, we often need to conduct prediction/classification using large clinical datasets (aka, clinical big data), for example, to identify high-risk patients for preventive interventions. Machine learning has been proposed as a key technology for doing this. Machine learning has won most data science competitions and could support many clinical activities, yet only 15% of hospitals use it for even limited purposes. Despite familiarity with data, health care researchers often lack machine learning expertise to directly use clinical big data, creating a hurdle in realizing value from their data. Health care researchers can work with data scientists with deep machine learning knowledge, but it takes time and effort for both parties to communicate effectively. Facing a shortage in the United States of data scientists and hiring competition from companies with deep pockets, health care systems have difficulty recruiting data scientists. Building and generalizing a machine learning model often requires hundreds to thousands of manual iterations by data scientists to select the following: (1) hyper-parameter values and complex algorithms that greatly affect model accuracy and (2) operators and periods for temporally aggregating clinical attributes (eg, whether a patient's weight kept rising in the past year). This process becomes infeasible with limited budgets. This study's goal is to enable health care researchers to directly use clinical big data, make machine learning feasible with limited budgets and data scientist resources, and realize value from data. This study will allow us to achieve the following: (1) finish developing the new software, Automated Machine Learning (Auto-ML), to automate model selection for machine learning with clinical big data and validate Auto-ML on seven benchmark modeling problems of clinical importance; (2) apply Auto-ML and novel methodology to two new modeling problems crucial for care

  16. Methods, systems and apparatus for controlling operation of two alternating current (AC) machines

    Science.gov (United States)

    Gallegos-Lopez, Gabriel [Torrance, CA; Nagashima, James M [Cerritos, CA; Perisic, Milun [Torrance, CA; Hiti, Silva [Redondo Beach, CA

    2012-02-14

    A system is provided for controlling two AC machines. The system comprises a DC input voltage source that provides a DC input voltage, a voltage boost command control module (VBCCM), a five-phase PWM inverter module coupled to the two AC machines, and a boost converter coupled to the inverter module and the DC input voltage source. The boost converter is designed to supply a new DC input voltage to the inverter module having a value that is greater than or equal to a value of the DC input voltage. The VBCCM generates a boost command signal (BCS) based on modulation indexes from the two AC machines. The BCS controls the boost converter such that the boost converter generates the new DC input voltage in response to the BCS. When the two AC machines require additional voltage that exceeds the DC input voltage required to meet a combined target mechanical power required by the two AC machines, the BCS controls the boost converter to drive the new DC input voltage generated by the boost converter to a value greater than the DC input voltage.

  17. Identifying essential genes in bacterial metabolic networks with machine learning methods

    Science.gov (United States)

    2010-01-01

    Background Identifying essential genes in bacteria supports to identify potential drug targets and an understanding of minimal requirements for a synthetic cell. However, experimentally assaying the essentiality of their coding genes is resource intensive and not feasible for all bacterial organisms, in particular if they are infective. Results We developed a machine learning technique to identify essential genes using the experimental data of genome-wide knock-out screens from one bacterial organism to infer essential genes of another related bacterial organism. We used a broad variety of topological features, sequence characteristics and co-expression properties potentially associated with essentiality, such as flux deviations, centrality, codon frequencies of the sequences, co-regulation and phyletic retention. An organism-wise cross-validation on bacterial species yielded reliable results with good accuracies (area under the receiver-operator-curve of 75% - 81%). Finally, it was applied to drug target predictions for Salmonella typhimurium. We compared our predictions to the viability of experimental knock-outs of S. typhimurium and identified 35 enzymes, which are highly relevant to be considered as potential drug targets. Specifically, we detected promising drug targets in the non-mevalonate pathway. Conclusions Using elaborated features characterizing network topology, sequence information and microarray data enables to predict essential genes from a bacterial reference organism to a related query organism without any knowledge about the essentiality of genes of the query organism. In general, such a method is beneficial for inferring drug targets when experimental data about genome-wide knockout screens is not available for the investigated organism. PMID:20438628

  18. Extensions and applications of ensemble-of-trees methods in machine learning

    Science.gov (United States)

    Bleich, Justin

    Ensemble-of-trees algorithms have emerged to the forefront of machine learning due to their ability to generate high forecasting accuracy for a wide array of regression and classification problems. Classic ensemble methodologies such as random forests (RF) and stochastic gradient boosting (SGB) rely on algorithmic procedures to generate fits to data. In contrast, more recent ensemble techniques such as Bayesian Additive Regression Trees (BART) and Dynamic Trees (DT) focus on an underlying Bayesian probability model to generate the fits. These new probability model-based approaches show much promise versus their algorithmic counterparts, but also offer substantial room for improvement. The first part of this thesis focuses on methodological advances for ensemble-of-trees techniques with an emphasis on the more recent Bayesian approaches. In particular, we focus on extensions of BART in four distinct ways. First, we develop a more robust implementation of BART for both research and application. We then develop a principled approach to variable selection for BART as well as the ability to naturally incorporate prior information on important covariates into the algorithm. Next, we propose a method for handling missing data that relies on the recursive structure of decision trees and does not require imputation. Last, we relax the assumption of homoskedasticity in the BART model to allow for parametric modeling of heteroskedasticity. The second part of this thesis returns to the classic algorithmic approaches in the context of classification problems with asymmetric costs of forecasting errors. First we consider the performance of RF and SGB more broadly and demonstrate its superiority to logistic regression for applications in criminology with asymmetric costs. Next, we use RF to forecast unplanned hospital readmissions upon patient discharge with asymmetric costs taken into account. Finally, we explore the construction of stable decision trees for forecasts of

  19. Simple gambling or sophisticated gaming? : applying game analysis methods to modern video slot machine games

    OpenAIRE

    Leppäsalko, Tero

    2017-01-01

    Slot machine games have become the most popular form of gambling worldwide. In Finland, their pervasiveness in public spaces and popularity makes them one of the most common form of gaming. However, in game studies, gambling games are often regarded as borderline games due to the player’s lack of control. In this thesis I ask whether modern video slot machine games can be considered as games and if so, what similarities there are between them and contemporary video games. To find out if m...

  20. Primal Domain Decomposition Method with Direct and Iterative Solver for Circuit-Field-Torque Coupled Parallel Finite Element Method to Electric Machine Modelling

    Directory of Open Access Journals (Sweden)

    Daniel Marcsa

    2015-01-01

    Full Text Available The analysis and design of electromechanical devices involve the solution of large sparse linear systems, and require therefore high performance algorithms. In this paper, the primal Domain Decomposition Method (DDM with parallel forward-backward and with parallel Preconditioned Conjugate Gradient (PCG solvers are introduced in two-dimensional parallel time-stepping finite element formulation to analyze rotating machine considering the electromagnetic field, external circuit and rotor movement. The proposed parallel direct and the iterative solver with two preconditioners are analyzed concerning its computational efficiency and number of iterations of the solver with different preconditioners. Simulation results of a rotating machine is also presented.

  1. Machine Learning and Radiology

    Science.gov (United States)

    Wang, Shijun; Summers, Ronald M.

    2012-01-01

    In this paper, we give a short introduction to machine learning and survey its applications in radiology. We focused on six categories of applications in radiology: medical image segmentation, registration, computer aided detection and diagnosis, brain function or activity analysis and neurological disease diagnosis from fMR images, content-based image retrieval systems for CT or MRI images, and text analysis of radiology reports using natural language processing (NLP) and natural language understanding (NLU). This survey shows that machine learning plays a key role in many radiology applications. Machine learning identifies complex patterns automatically and helps radiologists make intelligent decisions on radiology data such as conventional radiographs, CT, MRI, and PET images and radiology reports. In many applications, the performance of machine learning-based automatic detection and diagnosis systems has shown to be comparable to that of a well-trained and experienced radiologist. Technology development in machine learning and radiology will benefit from each other in the long run. Key contributions and common characteristics of machine learning techniques in radiology are discussed. We also discuss the problem of translating machine learning applications to the radiology clinical setting, including advantages and potential barriers. PMID:22465077

  2. Machine learning and radiology.

    Science.gov (United States)

    Wang, Shijun; Summers, Ronald M

    2012-07-01

    In this paper, we give a short introduction to machine learning and survey its applications in radiology. We focused on six categories of applications in radiology: medical image segmentation, registration, computer aided detection and diagnosis, brain function or activity analysis and neurological disease diagnosis from fMR images, content-based image retrieval systems for CT or MRI images, and text analysis of radiology reports using natural language processing (NLP) and natural language understanding (NLU). This survey shows that machine learning plays a key role in many radiology applications. Machine learning identifies complex patterns automatically and helps radiologists make intelligent decisions on radiology data such as conventional radiographs, CT, MRI, and PET images and radiology reports. In many applications, the performance of machine learning-based automatic detection and diagnosis systems has shown to be comparable to that of a well-trained and experienced radiologist. Technology development in machine learning and radiology will benefit from each other in the long run. Key contributions and common characteristics of machine learning techniques in radiology are discussed. We also discuss the problem of translating machine learning applications to the radiology clinical setting, including advantages and potential barriers. Copyright © 2012. Published by Elsevier B.V.

  3. A strategy for quantum algorithm design assisted by machine learning

    International Nuclear Information System (INIS)

    Bang, Jeongho; Lee, Jinhyoung; Ryu, Junghee; Yoo, Seokwon; Pawłowski, Marcin

    2014-01-01

    We propose a method for quantum algorithm design assisted by machine learning. The method uses a quantum–classical hybrid simulator, where a ‘quantum student’ is being taught by a ‘classical teacher’. In other words, in our method, the learning system is supposed to evolve into a quantum algorithm for a given problem, assisted by a classical main-feedback system. Our method is applicable for designing quantum oracle-based algorithms. We chose, as a case study, an oracle decision problem, called a Deutsch–Jozsa problem. We showed by using Monte Carlo simulations that our simulator can faithfully learn a quantum algorithm for solving the problem for a given oracle. Remarkably, the learning time is proportional to the square root of the total number of parameters, rather than showing the exponential dependence found in the classical machine learning-based method. (paper)

  4. A strategy for quantum algorithm design assisted by machine learning

    Science.gov (United States)

    Bang, Jeongho; Ryu, Junghee; Yoo, Seokwon; Pawłowski, Marcin; Lee, Jinhyoung

    2014-07-01

    We propose a method for quantum algorithm design assisted by machine learning. The method uses a quantum-classical hybrid simulator, where a ‘quantum student’ is being taught by a ‘classical teacher’. In other words, in our method, the learning system is supposed to evolve into a quantum algorithm for a given problem, assisted by a classical main-feedback system. Our method is applicable for designing quantum oracle-based algorithms. We chose, as a case study, an oracle decision problem, called a Deutsch-Jozsa problem. We showed by using Monte Carlo simulations that our simulator can faithfully learn a quantum algorithm for solving the problem for a given oracle. Remarkably, the learning time is proportional to the square root of the total number of parameters, rather than showing the exponential dependence found in the classical machine learning-based method.

  5. Effect of dielectric fluid with surfactant and graphite powder on Electrical Discharge Machining of titanium alloy using Taguchi method

    Directory of Open Access Journals (Sweden)

    Murahari Kolli

    2015-12-01

    Full Text Available In this paper, Taguchi method was employed to optimize the surfactant and graphite powder concentration in dielectric fluid for the machining of Ti-6Al-4V using Electrical Discharge Machining (EDM. The process parameters such as discharge current, surfactant concentration and powder concentration were changed to explore their effects on Material Removal Rate (MRR, Surface Roughness (SR, Tool wear rate (TWR and Recast Layer Thickness (RLT. Detailed analysis of structural features of machined surface was carried out using Scanning Electron Microscope (SEM to observe the influence of surfactant and graphite powder on the machining process. It was observed from the experimental results that the graphite powder and surfactant added dielectric fluid significantly improved the MRR, reduces the SR, TWR and RLT at various conditions. Analysis of Variance (ANOVA and F-test of experimental data values related to the important process parameters of EDM revealed that discharge current and surfactant concentration has more percentage of contribution on the MRR and TWR whereas the SR, and RLT were found to be affected greatly by the discharge current and graphite powder concentration.

  6. 3D dictionary learning based iterative cone beam CT reconstruction

    Directory of Open Access Journals (Sweden)

    Ti Bai

    2014-03-01

    Full Text Available Purpose: This work is to develop a 3D dictionary learning based cone beam CT (CBCT reconstruction algorithm on graphic processing units (GPU to improve the quality of sparse-view CBCT reconstruction with high efficiency. Methods: A 3D dictionary containing 256 small volumes (atoms of 3 × 3 × 3 was trained from a large number of blocks extracted from a high quality volume image. On the basis, we utilized cholesky decomposition based orthogonal matching pursuit algorithm to find the sparse representation of each block. To accelerate the time-consuming sparse coding in the 3D case, we implemented the sparse coding in a parallel fashion by taking advantage of the tremendous computational power of GPU. Conjugate gradient least square algorithm was adopted to minimize the data fidelity term. Evaluations are performed based on a head-neck patient case. FDK reconstruction with full dataset of 364 projections is used as the reference. We compared the proposed 3D dictionary learning based method with tight frame (TF by performing reconstructions on a subset data of 121 projections. Results: Compared to TF based CBCT reconstruction that shows good overall performance, our experiments indicated that 3D dictionary learning based CBCT reconstruction is able to recover finer structures, remove more streaking artifacts and also induce less blocky artifacts. Conclusion: 3D dictionary learning based CBCT reconstruction algorithm is able to sense the structural information while suppress the noise, and hence to achieve high quality reconstruction under the case of sparse view. The GPU realization of the whole algorithm offers a significant efficiency enhancement, making this algorithm more feasible for potential clinical application.-------------------------------Cite this article as: Bai T, Yan H, Shi F, Jia X, Lou Y, Xu Q, Jiang S, Mou X. 3D dictionary learning based iterative cone beam CT reconstruction. Int J Cancer Ther Oncol 2014; 2(2:020240. DOI: 10

  7. SU-D-204-06: Integration of Machine Learning and Bioinformatics Methods to Analyze Genome-Wide Association Study Data for Rectal Bleeding and Erectile Dysfunction Following Radiotherapy in Prostate Cancer

    Energy Technology Data Exchange (ETDEWEB)

    Oh, J; Deasy, J [Memorial Sloan Kettering Cancer Center, New York, NY (United States); Kerns, S [University of Rochester Medical Center, Rochester, NY (United States); Ostrer, H [Albert Einstein College of Medicine, Bronx, NY (United States); Rosenstein, B [Mount Sinai School of Medicine, New York, NY (United States)

    2016-06-15

    Purpose: We investigated whether integration of machine learning and bioinformatics techniques on genome-wide association study (GWAS) data can improve the performance of predictive models in predicting the risk of developing radiation-induced late rectal bleeding and erectile dysfunction in prostate cancer patients. Methods: We analyzed a GWAS dataset generated from 385 prostate cancer patients treated with radiotherapy. Using genotype information from these patients, we designed a machine learning-based predictive model of late radiation-induced toxicities: rectal bleeding and erectile dysfunction. The model building process was performed using 2/3 of samples (training) and the predictive model was tested with 1/3 of samples (validation). To identify important single nucleotide polymorphisms (SNPs), we computed the SNP importance score, resulting from our random forest regression model. We performed gene ontology (GO) enrichment analysis for nearby genes of the important SNPs. Results: After univariate analysis on the training dataset, we filtered out many SNPs with p>0.001, resulting in 749 and 367 SNPs that were used in the model building process for rectal bleeding and erectile dysfunction, respectively. On the validation dataset, our random forest regression model achieved the area under the curve (AUC)=0.70 and 0.62 for rectal bleeding and erectile dysfunction, respectively. We performed GO enrichment analysis for the top 25%, 50%, 75%, and 100% SNPs out of the select SNPs in the univariate analysis. When we used the top 50% SNPs, more plausible biological processes were obtained for both toxicities. An additional test with the top 50% SNPs improved predictive power with AUC=0.71 and 0.65 for rectal bleeding and erectile dysfunction. A better performance was achieved with AUC=0.67 when age and androgen deprivation therapy were added to the model for erectile dysfunction. Conclusion: Our approach that combines machine learning and bioinformatics techniques

  8. SU-D-204-06: Integration of Machine Learning and Bioinformatics Methods to Analyze Genome-Wide Association Study Data for Rectal Bleeding and Erectile Dysfunction Following Radiotherapy in Prostate Cancer

    International Nuclear Information System (INIS)

    Oh, J; Deasy, J; Kerns, S; Ostrer, H; Rosenstein, B

    2016-01-01

    Purpose: We investigated whether integration of machine learning and bioinformatics techniques on genome-wide association study (GWAS) data can improve the performance of predictive models in predicting the risk of developing radiation-induced late rectal bleeding and erectile dysfunction in prostate cancer patients. Methods: We analyzed a GWAS dataset generated from 385 prostate cancer patients treated with radiotherapy. Using genotype information from these patients, we designed a machine learning-based predictive model of late radiation-induced toxicities: rectal bleeding and erectile dysfunction. The model building process was performed using 2/3 of samples (training) and the predictive model was tested with 1/3 of samples (validation). To identify important single nucleotide polymorphisms (SNPs), we computed the SNP importance score, resulting from our random forest regression model. We performed gene ontology (GO) enrichment analysis for nearby genes of the important SNPs. Results: After univariate analysis on the training dataset, we filtered out many SNPs with p>0.001, resulting in 749 and 367 SNPs that were used in the model building process for rectal bleeding and erectile dysfunction, respectively. On the validation dataset, our random forest regression model achieved the area under the curve (AUC)=0.70 and 0.62 for rectal bleeding and erectile dysfunction, respectively. We performed GO enrichment analysis for the top 25%, 50%, 75%, and 100% SNPs out of the select SNPs in the univariate analysis. When we used the top 50% SNPs, more plausible biological processes were obtained for both toxicities. An additional test with the top 50% SNPs improved predictive power with AUC=0.71 and 0.65 for rectal bleeding and erectile dysfunction. A better performance was achieved with AUC=0.67 when age and androgen deprivation therapy were added to the model for erectile dysfunction. Conclusion: Our approach that combines machine learning and bioinformatics techniques

  9. Automatic learning-based beam angle selection for thoracic IMRT

    International Nuclear Information System (INIS)

    Amit, Guy; Marshall, Andrea; Purdie, Thomas G.; Jaffray, David A.; Levinshtein, Alex; Hope, Andrew J.; Lindsay, Patricia; Pekar, Vladimir

    2015-01-01

    coverage and organ at risk sparing and were superior over plans produced with fixed sets of common beam angles. The great majority of the automatic plans (93%) were approved as clinically acceptable by three radiation therapy specialists. Conclusions: The results demonstrated the feasibility of utilizing a learning-based approach for automatic selection of beam angles in thoracic IMRT planning. The proposed method may assist in reducing the manual planning workload, while sustaining plan quality

  10. Comparison between Two Linear Supervised Learning Machines' Methods with Principle Component Based Methods for the Spectrofluorimetric Determination of Agomelatine and Its Degradants.

    Science.gov (United States)

    Elkhoudary, Mahmoud M; Naguib, Ibrahim A; Abdel Salam, Randa A; Hadad, Ghada M

    2017-05-01

    Four accurate, sensitive and reliable stability indicating chemometric methods were developed for the quantitative determination of Agomelatine (AGM) whether in pure form or in pharmaceutical formulations. Two supervised learning machines' methods; linear artificial neural networks (PC-linANN) preceded by principle component analysis and linear support vector regression (linSVR), were compared with two principle component based methods; principle component regression (PCR) as well as partial least squares (PLS) for the spectrofluorimetric determination of AGM and its degradants. The results showed the benefits behind using linear learning machines' methods and the inherent merits of their algorithms in handling overlapped noisy spectral data especially during the challenging determination of AGM alkaline and acidic degradants (DG1 and DG2). Relative mean squared error of prediction (RMSEP) for the proposed models in the determination of AGM were 1.68, 1.72, 0.68 and 0.22 for PCR, PLS, SVR and PC-linANN; respectively. The results showed the superiority of supervised learning machines' methods over principle component based methods. Besides, the results suggested that linANN is the method of choice for determination of components in low amounts with similar overlapped spectra and narrow linearity range. Comparison between the proposed chemometric models and a reported HPLC method revealed the comparable performance and quantification power of the proposed models.

  11. A Sensor-less Method for Online Thermal Monitoring of Switched Reluctance Machine

    DEFF Research Database (Denmark)

    Wang, Chao; Liu, Hui; Liu, Xiao

    2015-01-01

    Stator winding is one of the most vulnerable parts in Switched Reluctance Machine (SRM), especially under thermal stresses during frequently changing operation circumstances and susceptible heat dissipation conditions. Thus real-time online thermal monitoring of the stator winding is of great sig...

  12. A machine learning method for fast and accurate characterization of depth-of-interaction gamma cameras

    DEFF Research Database (Denmark)

    Pedemonte, Stefano; Pierce, Larry; Van Leemput, Koen

    2017-01-01

    to impose the depth-of-interaction in an experimental set-up. In this article we introduce a machine learning approach for extracting accurate forward models of gamma imaging devices from simple pencil-beam measurements, using a nonlinear dimensionality reduction technique in combination with a finite...

  13. Friction-resilient position control for machine tools—Adaptive and sliding-mode methods compared

    DEFF Research Database (Denmark)

    Papageorgiou, Dimitrios; Blanke, Mogens; Niemann, Hans Henrik

    2018-01-01

    Robust trajectory tracking and increasing demand for high-accuracy tool positioning have motivated research in advanced control design for machine tools. State-of-the-art industry solutions employ cascades of Proportional (P) and Proportional-Integral (PI) controllers for closed-loop servo contro...

  14. The Librarian Leading the Machine: A Reassessment of Library Instruction Methods

    Science.gov (United States)

    Greer, Katie; Hess, Amanda Nichols; Kraemer, Elizabeth W.

    2016-01-01

    This article builds on the 2007 College and Research Libraries a