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Sample records for macaca mulatta inbreeding

  1. Prototype Abstraction by Monkeys ("Macaca Mulatta")

    Science.gov (United States)

    Smith, J. David; Redford, Joshua S.; Haas, Sarah M.

    2008-01-01

    The authors analyze the shape categorization of rhesus monkeys ("Macaca mulatta") and the role of prototype- and exemplar-based comparison processes in monkeys' category learning. Prototype and exemplar theories make contrasting predictions regarding performance on the Posner-Homa dot-distortion categorization task. Prototype theory--which…

  2. Hepatitis G virus genomic RNA is pathogenic to Macaca mulatta

    Institute of Scientific and Technical Information of China (English)

    Hao Ren; Fen-Lu Zhu; Ming-Mei Cao; Xin-Yu Wen; Ping Zhao; Zhong-Tian Qi

    2005-01-01

    AIM: To explore the pathogenicity and infectivity of hepatitis G virus (HGV) by observing replication and expression of the virus, as well as the serological and histological changes of Macaca mulatta infected with HGV genomic RNA or HGV RNA-positive serum.METHODS: Full-length HGV cDNA clone (HGVqz) was constructed and proved to be infectious, from which HGV genomic RNA was transcribed in vitro. Macaca mulatta BY1 was intra-hepatically inoculated with HGV genomic RNA, HGV RNA-positive serum from BY1 was intravenously inoculated into Macaca mulatta BM1, and then BB1 was infected with serum from BM1. Serum and liver tissue were taken regularly, and checked with RT-PCR, in situ hybridization and other immunological, serological,histological assays.RESULTS: Serum HGV RNA was detectable in all the 3Macaca mulattas, serological and histological examinations showed the experimental animals had slightly elevated alanine transaminase (ALT) and developed HGV viremia during the infectious period. The histology, immunohistochemistry, and in situ hybridization in liver tissues of the inoculated animals demonstrated a very mild hepatitis with HGV antigen expression in cytoplasm of hepatocytes.RT-PCR and quantitative PCR results showed that HGV could replicate in liver.CONCLUSION: The genomic RNA from full-length HGV cDNA is infectious to the Macaca mulatta and can cause mild hepatitis. HGV RNA-positive serum, from HGV RNA inoculated Macaca mulatta, is infectious to other Macaca mulattas. Macaca mulatta is susceptible to the inoculated HGV, and therefore can be used as an experimental animal model for the studies of HGV infection and pathogenesis.

  3. Can Monkeys (Macaca mulatta) Represent Invisible Displacement?

    Science.gov (United States)

    Filion, Christine M.; Washburn, David A.; Gulledge, Jonathan P.

    1996-01-01

    Four experiments were conducted to assess whether or not rhesus macaques (Macaca mulatta) could represent the unperceived movements of a stimulus. Subjects were tested on 2 computerized tasks, HOLE (monkeys) and LASER (humans and monkeys), in which subjects needed to chase or shoot at, respectively, a moving target that either remained visible or became invisible for a portion of its path of movement. Response patterns were analyzed and compared between target-visible and target-invisible conditions. Results of Experiments 1, 2, and 3 demonstrated that the monkeys are capable of extrapolating movement. That this extrapolation involved internal representation of the target's invisible movement was suggested but not confirmed. Experiment 4, however, demonstrated that the monkeys are capable of representing the invisible displacements of a stimulus.

  4. Rhesus monkeys (Macaca mulatta) map number onto space

    OpenAIRE

    Drucker, Caroline B.; Brannon, Elizabeth M.

    2014-01-01

    Humans map number onto space. However, the origins of this association, and particularly the degree to which it depends upon cultural experience, are not fully understood. Here we provide the first demonstration of a number-space mapping in a non-human primate. We trained four adult male rhesus macaques (Macaca mulatta) to select the fourth position from the bottom of a five-element vertical array. Monkeys maintained a preference to choose the fourth position through changes in the appearance...

  5. Variation in Clitoral Length in Rhesus Macaques (Macaca mulatta)

    Science.gov (United States)

    Goldschmidt, Beatriz; Cabello, Pedro H; Kugelmeier, Tatiana; Pereira, Barbara B; Lopes, Claudia A; Fasano, Daniele M; Andrade, Marcia C; Santos, Joice S; Marinho, Antonio M

    2009-01-01

    Clitoromegaly in the neonatal period is an important morphologic sign that can be useful for sexual determination in aberrant cases. In rhesus monkeys, differentiation of the external genitalia occurs early during gestation (at 55 to 60 d) and is complete by approximately 80 d. Most of the critical steps in genital differentiation in primates occur prenatally. We sought to determine clitoral size in normal rhesus monkeys (Macaca mulatta) and possible effects of age and inheritance. Clitoral length was highly variable and had no relationship to fertility. Statistical evaluation revealed no association in the distribution of daughters with and without clitoris between mothers with and without clitoris. However, even when mated with several female monkeys, some male macaques produced primarily daughters without clitoris. PMID:19807967

  6. A Macaca mulatta model of fulminant hepatic failure

    Institute of Scientific and Technical Information of China (English)

    Ping Zhou; Hong Bu; Jie Xia; Gang Guo; Li Li; Yu-Jun Shi; Zi-Xing Huang; Qiang Lu; Hong-Xia Li

    2012-01-01

    AIM: To establish an appropriate primate model of fulminant hepatic failure (FHF). METHODS: We have, for the first time, established a large animal model of FHF in Macaca mulatta by intraperitoneal infusion of amatoxin and endotoxin. Clinical features, biochemical indexes, histopathology and iconography were examined to dynamically investigate the progress and outcome of the animal model. RESULTS: Our results showed that the enzymes and serum bilirubin were markedly increased and the enzyme-bilirubin segregation emerged 36 h after toxin administration. Coagulation activity was significantly decreased. Gradually deteriorated parenchymal abnormality was detected by magnetic resonance imaging (MRI) and ultrasonography at 48 h. The liver biopsy showed marked hepatocyte steatosis and massive parenchymal necrosis at 36 h and 49 h, respectively. The autopsy showed typical yellow atrophy of the liver. Hepatic encephalopathy of the models was also confirmed by hepatic coma, MRI and pathological changes of cerebral edema. The lethal effects of the extrahepatic organ dysfunction were ruled out by their biochemical indices, imaging and histopathology. CONCLUSION: We have established an appropriate large primate model of FHF, which is closely similar to clinic cases, and can be used for investigation of the mechanism of FHF and for evaluation of potential medical therapies.

  7. Rhesus monkeys (Macaca mulatta) map number onto space.

    Science.gov (United States)

    Drucker, Caroline B; Brannon, Elizabeth M

    2014-07-01

    Humans map number onto space. However, the origins of this association, and particularly the degree to which it depends upon cultural experience, are not fully understood. Here we provide the first demonstration of a number-space mapping in a non-human primate. We trained four adult male rhesus macaques (Macaca mulatta) to select the fourth position from the bottom of a five-element vertical array. Monkeys maintained a preference to choose the fourth position through changes in the appearance, location, and spacing of the vertical array. We next asked whether monkeys show a spatially-oriented number mapping by testing their responses to the same five-element stimulus array rotated ninety degrees into a horizontal line. In these horizontal probe trials, monkeys preferentially selected the fourth position from the left, but not the fourth position from the right. Our results indicate that rhesus macaques map number onto space, suggesting that the association between number and space in human cognition is not purely a result of cultural experience and instead has deep evolutionary roots.

  8. Seed dispersal by rhesus macaques Macaca mulatta in Northern India.

    Science.gov (United States)

    Sengupta, Asmita; McConkey, Kim R; Radhakrishna, Sindhu

    2014-12-01

    Frugivorous primates are important seed dispersers and their absence from forest patches is predicted to be detrimental to tropical forest regeneration and recruitment. With the reduction of primate populations globally, ecologically resilient primate species, characterized by dietary flexibility and the ability to thrive in a variety of habitats, assume new importance as seed dispersers. The most widely distributed non-human primate, the rhesus macaque Macaca mulatta has been intensively studied but little is known about its role in maintaining ecosystem structure and functions. Due to their frugivorous diet, large group sizes, large home ranges and tolerance to disturbance, rhesus macaques may be effective seed dispersers. We studied seed dispersal by rhesus macaques at the Buxa Tiger Reserve, India, through a combination of behavioural observations and germination experiments. Rhesus macaques dispersed 84% of the 49 species they fed on either through spitting or defecation. Nearly 96% of the handled seeds were undamaged and 61% of the species for which germination tests were performed had enhanced germination. Almost 50% of the monitored seeds among those deposited in situ germinated and 22% established seedlings, suggesting that rhesus macaques are important seed dispersers in tropical forests. Due to their widespread distribution and large populations, rhesus macaques are perceived as common and are categorized as Least Concern on the IUCN Red List, effectively excluding them from any conservation plans. Based on the results of our study, we argue that rhesus macaques fulfill critical ecological functions in their habitat and that this parameter must be taken into consideration when they are reviewed for conservation priorities.

  9. Acute-phase responses in healthy and diseased rhesus macaques (Macaca mulatta)

    DEFF Research Database (Denmark)

    Krogh, Anne Kirstine Havnsøe; Lundsgaard, Jo F. H.; Bakker, Jaco

    2014-01-01

    Five acute-phase reactants—serum amyloid A (SAA), C-reactive protein (CRP), haptoglobin, albumin, and iron—were measured using commercially available assays in 110 healthy rhesus macaques (Macaca mulatta), and reference intervals were established for future use in health monitoring of this specie...

  10. Essentialism in the Absence of Language? Evidence from Rhesus Monkeys ("Macaca mulatta")

    Science.gov (United States)

    Phillips, Webb; Shankar, Maya; Santos, Laurie R.

    2010-01-01

    We explored whether rhesus monkeys (Macaca mulatta) share one important feature of human essentialist reasoning: the capacity to track category membership across radical featural transformations. Specifically, we examined whether monkeys--like children (Keil, 1989)--expect a transformed object to have the internal properties of its original…

  11. Surrogate Mobility and Orientation Affect the Early Neurobehavioral Development of Infant Rhesus Macaques (Macaca mulatta)

    OpenAIRE

    Amanda M Dettmer; Ruggerio, Angela M.; Novak, Melinda A.; Meyer, Jerrold S.; Suomi, Stephen J.

    2008-01-01

    A biological mother’s movement appears necessary for optimal development in infant monkeys. However, nursery-reared monkeys are typically provided with inanimate surrogate mothers that move very little. The purpose of this study was to evaluate the effects of a novel, highly mobile surrogate mother on motor development, exploration, and reactions to novelty. Six infant rhesus macaques (Macaca mulatta) were reared on mobile hanging surrogates (MS) and compared to six infants reared on standard...

  12. Positive reinforcement training as enrichment for singly housed rhesus macaques (Macaca mulatta)

    OpenAIRE

    Baker, KC; Bloomsmith, MA; Neu, K; Griffis, C; Maloney, M.

    2010-01-01

    Positive reinforcement training is one component of behavioural management employed to improve psychological well-being. There has been regulatory promotion to compensate for restricted social housing in part by providing human interaction to singly caged primates, implying an efficacy standard for evaluating human interaction. The effect of positive reinforcement training on the behaviour of 61 singly housed laboratory rhesus macaques (Macaca mulatta) was evaluated at two large primate facil...

  13. Fructosamine reference ranges in rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Williams-Fritze, Misty J; Smith, Peter C; Zelterman, Daniel; Scholz, Jodi A Carlson

    2011-07-01

    Naturally occurring diabetes mellitus (DM) is common in several species of Old and New World nonhuman primates. Fructosamine values provide important information about recent glycemic control and can be useful in the diagnosis and management of DM. However, despite an abundance of reports in the literature describing spontaneous and induced DM in monkeys, few reference ranges are available for fructosamine. Reference ranges have been published for woolly monkeys (Lagothrix lagotricha), cynomolgus macaques (Macaca fascicularis), and stumptail macaques (Macaca arctoides) but currently are not available for rhesus macaques. At our institution, DM is a common diagnosis in aging rhesus macaques. Here we report a reference range for fructosamine in rhesus macaques. The overall range was 157 to 230 μmol/L, with male rhesus and macaques 10 y or older having significantly higher values than do female rhesus and macaques younger than 10 y, respectively. This range provides clinical veterinarians with an additional tool for evaluating glycemic control in rhesus macaques. Copyright 2011 by the American Association for Laboratory Animal Science

  14. Pharmacokinetics of tramadol following intravenous and oral administration in male rhesus macaques (Macaca mulatta)

    Science.gov (United States)

    Kelly, Kristi R.; Pypendop, Bruno H.; Christe, Kari L.

    2014-01-01

    Recently, tramadol and its active metabolite, O-desmethyltramadol (M1), have been studied as analgesic agents in various traditional veterinary species (e.g. dogs, cats, etc.). This study explores the pharmacokinetics of tramadol and M1 after intravenous (IV) and oral (PO) administration in rhesus macaques (Macaca mulatta), a nontraditional veterinary species. Rhesus macaques are Old World monkeys that are commonly used in biomedical research. Effects of tramadol administration to monkeys are unknown, and research veterinarians may avoid inclusion of this drug into pain management programs due to this limited knowledge. Four healthy, socially-housed, adult male rhesus macaques (Macaca mulatta) were used in this study. Blood samples were collected prior to, and up to 10 h post tramadol administration. Serum tramadol and M1 were analyzed using liquid chromatography-mass spectrometry. Noncompartmental pharmacokinetic analysis was performed. Tramadol clearance was 24.5 (23.4-32.7) mL/min/kg. Terminal half-life of tramadol was 111 (106-127) min IV and 133 (84.9-198) min PO. Bioavailability of tramadol was poor [3.47% (2.14-5.96%)]. Maximum serum concentration of M1 was 2.28 (1.88-2.73) ng/mL IV and 11.2 (9.37-14.9) ng/mL PO. Sedation and pruritus were observed after IV administration (180 words). PMID:25488714

  15. Pharmacokinetics of tramadol following intravenous and oral administration in male rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Kelly, K R; Pypendop, B H; Christe, K L

    2015-08-01

    Recently, tramadol and its active metabolite, O-desmethyltramadol (M1), have been studied as analgesic agents in various traditional veterinary species (e.g., dogs, cats, etc.). This study explores the pharmacokinetics of tramadol and M1 after intravenous (IV) and oral (PO) administration in rhesus macaques (Macaca mulatta), a nontraditional veterinary species. Rhesus macaques are Old World monkeys that are commonly used in biomedical research. Effects of tramadol administration to monkeys are unknown, and research veterinarians may avoid inclusion of this drug into pain management programs due to this limited knowledge. Four healthy, socially housed, adult male rhesus macaques (Macaca mulatta) were used in this study. Blood samples were collected prior to, and up to 10 h post-tramadol administration. Serum tramadol and M1 were analyzed using liquid chromatography-mass spectrometry. Noncompartmental pharmacokinetic analysis was performed. Tramadol clearance was 24.5 (23.4-32.7) mL/min/kg. Terminal half-life of tramadol was 111 (106-127) min IV and 133 (84.9-198) min PO. Bioavailability of tramadol was poor [3.47% (2.14-5.96%)]. Maximum serum concentration of M1 was 2.28 (1.88-2.73) ng/mL IV and 11.2 (9.37-14.9) ng/mL PO. Sedation and pruritus were observed after IV administration.

  16. Biologic data of Macaca mulatta, Macaca fascicularis, and Saimiri sciureusused for research at the fiocruz primate center

    Directory of Open Access Journals (Sweden)

    Márcia Cristina Ribeiro Andrade

    2004-10-01

    Full Text Available Physiological parameters of laboratory animals used for biomedical research is crucial for following several experimental procedures. With the intent to establish baseline biologic parameters for non-human primates held in closed colonies, hematological and morphometric data of captive monkeys were determined. Data of clinically healthy rhesus macaques (Macaca mulatta, cynomolgus monkeys (Macaca fascicularis, and squirrel monkeys (Saimiri sciureus were collected over a period of five years. Animals were separated according to sex and divided into five age groups. Hematological data were compared with those in the literature by Student's t test. Discrepancies with significance levels of 0.1, 1 or 5% were found in the hematological studies. Growth curves showed that the sexual dimorphism of rhesus monkeys appeared at an age of four years. In earlier ages, the differences between sexes could not be distinguished (p < 0.05. Sexual dimorphism in both squirrel monkeys and cynomolgus monkeys occurred at an age of about 32 months. Data presented in this paper could be useful for comparative studies using primates under similar conditions.

  17. Pharmacokinetics of 2 Formulations of Buprenorphine in Macaques (Macaca mulatta and Macaca fascicularis)

    OpenAIRE

    2013-01-01

    Buprenorphine is the cornerstone of pain management in nonhuman primates, but the pharmacokinetics of this widely used drug are unknown. The purpose of this study was to evaluate the pharmacokinetic profiles of buprenorphine (0.01 and 0.03 mg/kg IM) and sustained-release buprenorphine (0.2 mg/kg SC) in 2 macaque species (M. mulatta and M. fascicularis) by using mass spectrometry. The pharmacokinetics did not differ significantly between species, and buprenorphine was dose-proportional at the ...

  18. Effect of radiation and age on immunoglobulin levels in rhesus monkeys (Macaca mulatta)

    Science.gov (United States)

    Stone, W. H.; Saphire, D. G.; Hackleman, S. M.; Braun, A. M.; Pennington, P.; Scheffler, J.; Wigle, J. C.; Cox, A. B.

    1994-01-01

    We report the results of a study on the immunoglobulin levels of rhesus monkeys (Macaca mulatta) in a colony consisting of the survivors of monkeys that received a single whole-body exposure to protons, electrons or X rays between 1964 and 1969. This colony has been maintained to assess the long-term effects of ionizing radiation on astronauts and high-flying pilots. Of the original 358 monkeys that were retained for lifetime studies, 129 (97 irradiated and 32 controls) were available for our study. We found no significant difference between the irradiated and control monkeys in mean levels of IgA, IgG and IgM, irrespective of the radiation treatment. The availability of these aged monkeys provided a unique opportunity to compare their immunoglobulin levels to those of other monkeys of various ages, and thus assess the effect of age on immunoglobulin levels. We found that only the IgA levels increase with age.

  19. Effects of feeding selenium deficient diets to rhesus monkeys (Macaca Mulatta)

    Energy Technology Data Exchange (ETDEWEB)

    Butler, J.A.; Whanger, P.D.; Patton, N.M.

    1988-02-01

    Pregnant rhesus monkeys (Macaca mulatta) were fed either selenium (Se) deficient or Se supplemented diets with adequate vitamin E. Except for some cardiac irregularities in the first babies born to these females, no physiological disorders due to Se deficiency were seen in a subsequent offspring. Plasma and erythrocyte glutathione peroxidase activities and blood Se levels increased in the Se supplemented monkeys but decreased in the deficient ones. The data indicated that hair Se levels reflect long term exposure to this element. In a very preliminary experiment, evidence was obtained to indicate that dietary protein deficiency along with Se deficiency will generate cardiomyopathic lesions characteristic of Se deficiency. It is hypothesized that, in addition to Se deficiency, another dietary deficiency (or abnormality) is necessary to produce Se deficiency lesions in higher primates. Higher glutathione transferase (or non-Se glutathione peroxidase) activity in tissues of rhesus monkeys may account for this resistance.

  20. Auditory Rehabilitation in Rhesus Macaque Monkeys (Macaca mulatta) with Auditory Brainstem Implants

    Institute of Scientific and Technical Information of China (English)

    Zhen-Min Wang; Zhi-Jun Yang; Fu Zhao; Bo Wang; Xing-Chao Wang; Pei-Ran Qu; Pi-Nan Liu

    2015-01-01

    Background:The auditory brainstem implants (ABIs) have been used to treat deafness for patients with neurofibromatosis Type 2 and nontumor patients.The lack of an appropriate animal model has limited the study of improving hearing rehabilitation by the device.This study aimed to establish an animal model of ABI in adult rhesus macaque monkey (Macaca mulatta).Methods:Six adult rhesus macaque monkeys (M.mulatta) were included.Under general anesthesia,a multichannel ABI was implanted into the lateral recess of the fourth ventricle through the modified suboccipital-retrosigmoid (RS) approach.The electrical auditory brainstem response (EABR) waves were tested to ensure the optimal implant site.After the operation,the EABR and computed tomography (CT) were used to test and verify the effectiveness via electrophysiology and anatomy,respectively.The subjects underwent behavioral observation for 6 months,and the postoperative EABR was tested every two weeks from the 1st month after implant surgery.Result:The implant surgery lasted an average of 5.2 h,and no monkey died or sacrificed.The averaged latencies of peaks Ⅰ,Ⅱ and Ⅳ were 1.27,2.34 and 3.98 ms,respectively in the ABR.One-peak EABR wave was elicited in the operation,and one-or two-peak waves were elicited during the postoperative period.The EABR wave latencies appeared to be constant under different stimulus intensities;however,the amplitudes increased as the stimulus increased within a certain scope.Conclusions:It is feasible and safe to implant ABIs in rhesus macaque monkeys (M.mulatta) through a modified suboccipital RS approach,and EABR and CT are valid tools for animal model establishment.In addition,this model should be an appropriate animal model for the electrophysiological and behavioral study of rhesus macaque monkey with ABI.

  1. Pharmacokinetics of 2 formulations of buprenorphine in macaques (Macaca mulatta and Macaca fascicularis).

    Science.gov (United States)

    Nunamaker, Elizabeth A; Halliday, Lisa C; Moody, David E; Fang, Wenfang B; Lindeblad, Matthew; Fortman, Jeffrey D

    2013-01-01

    Buprenorphine is the cornerstone of pain management in nonhuman primates, but the pharmacokinetics of this widely used drug are unknown. The purpose of this study was to evaluate the pharmacokinetic profiles of buprenorphine (0.01 and 0.03 mg/kg IM) and sustained-release buprenorphine (0.2 mg/kg SC) in 2 macaque species (M. mulatta and M. fascicularis) by using mass spectrometry. The pharmacokinetics did not differ significantly between species, and buprenorphine was dose-proportional at the tested doses. The low and high doses of buprenorphine had elimination half-lives of 2.6 ± 0.7 and 5.3 ± 2.0 h, respectively, but the low-dose data were constrained by the sensitivity of the analytical method. Sustained-release buprenorphine had an elimination half-life of 42.6 ± 26.2 h. The AUC0-Tlast of buprenorphine were 9.1 ± 4.3 and 39.0 ± 25.1 ng × h/mL for the low and high doses, respectively, and sustained-release buprenorphine had an AUC0-Tlast of 177 ± 74 ng × h/mL. Assuming a hypothesized therapeutic buprenorphine plasma concentration threshold of 0.1 ng/mL in macaques, these results suggest that buprenorphine doses of 0.01 mg/kg IM should be administered every 6 to 8 h, whereas doses of 0.03 mg/kg IM can be administered every 12 h. These results further demonstrate that a single 0.2-mg/kg SC injection of sustained-release buprenorphine maintains plasma concentrations above 0.1 ng/mL for 5 d in macaques. These findings support a new dosing strategy using sustained-release buprenorphine to improve pain management, decrease animal stress, improve animal welfare, and simplify the postoperative management of nonhuman primates in laboratory animal and zoological settings.

  2. Efficacy of antibiotic-impregnated polymethylmethacrylate beads in a rhesus macaque (Macaca mulatta) with osteomyelitis.

    Science.gov (United States)

    Kelly, Kristi R; Kapatkin, Amy R; Zwingenberger, Allison L; Christe, Kari L

    2012-08-01

    Here we describe the successful surgical implementation of antibiotic-impregnated polymethylmethacrylate beads in a rhesus macaque (Macaca mulatta) with marked osteomyelitis. The macaque presented to the veterinary clinic with grossly contaminated bite wounds in the left ankle secondary to conspecific trauma. Radiographic findings were highly suggestive of osteomyelitis. Additional differential diagnoses included bony infarct, fracture, and cellulitis. In light of the location of the lesion and extensive tissue trauma, the animal had a poor prognosis. Systemic, broad-spectrum antibiotics were instituted. After 2 wk of care, lesions did not respond to empirical therapies. On consultation, a veterinary orthopedic surgeon at another facility recommended placement of antibiotic-impregnated polymethylmethacrylate beads at the sites of osteomyelitis. The animal underwent minor surgery in which beads were introduced into the wound. The monkey had a positive response to therapy. The animal regained full function and was returned to outdoor social housing. Veterinarians are encouraged to consider using antibiotic-impregnated polymethylmethacrylate beads when treating osteomyelitis in other nonhuman primates and in other traditional laboratory animal species.

  3. Circulation of Campylobacter spp. in rhesus monkeys (Macaca mulatta held in captivity: a longitudinal study

    Directory of Open Access Journals (Sweden)

    Márcia Cristina Ribeiro Andrade

    2007-02-01

    Full Text Available Campylobacteriosis is an extremely important zoonosis, circulating freely in the environment. In nonhuman primates kept in open facilities and bred for experimental purposes, the presence of Campylobacter spp. could cause severe damage to the production and interfere with the results of scientific research. In this paper, we assessed the circulation of Campylobacter spp. in a colony of clinically healthy rhesus monkeys (Macaca mulatta destined to research. The analysis was carried out during seven non-consecutive years. Data showed that despite several changes made in animal management along the studied years in order to control this zoonosis, reduction of bacterial charge did not occur. Significant differences among the age groups and sex were observed. Infants showed higher susceptibility than adult animals. In general males were more infected than females. Modifications adopted in the handling techniques need to be reviewed with the intent of improving the production, reducing bacterial infection of the stock and avoiding undesirable cross reactions in the research carried out with these animals. Therefore, this paper alerts professionals that work directly with captive rhesus monkeys about the risks of Campylobacter spp. infection and possible interference on the experimental procedures.

  4. Training pair-housed Rhesus macaques (Macaca mulatta) using a combination of negative and positive reinforcement.

    Science.gov (United States)

    Wergård, Eva-Marie; Temrin, Hans; Forkman, Björn; Spångberg, Mats; Fredlund, Hélène; Westlund, Karolina

    2015-04-01

    When training animals, time is sometimes a limiting factor hampering the use of positive reinforcement training (PRT) exclusively. The aim of this study was to evaluate the effects of a combination of negative and positive reinforcement training (NPRT). Twenty naïve female Rhesus macaques (Macaca mulatta) were trained in 30 sessions with either PRT (n=8) or NPRT (n=12) to respond to a signal, move into a selected cage section and accept confinement. In the NPRT-group a signal preceded the presentation of one or several novel, and thus aversive, stimuli. When the correct behaviour was performed, the novel stimulus was removed and treats were given. As the animal learned to perform the correct behaviour, the use of novel stimuli was decreased and finally phased out completely. None of the PRT-trained animals finished the task. Ten out of 12 monkeys in the NPRT-group succeeded to perform the task within the 30 training sessions, a significant difference from the PRT-group (p=0.0007). A modified approach test showed no significant difference between the groups (p=0.67) in how they reacted to the trainer. The results from this study suggest that carefully conducted NPRT can be an alternative training method to consider, especially when under a time constraint.

  5. Surrogate mobility and orientation affect the early neurobehavioral development of infant rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Dettmer, Amanda M; Ruggiero, Angela M; Novak, Melinda A; Meyer, Jerrold S; Suomi, Stephen J

    2008-05-01

    A biological mother's movement appears necessary for optimal development in infant monkeys. However, nursery-reared monkeys are typically provided with inanimate surrogate mothers that move very little. The purpose of this study was to evaluate the effects of a novel, highly mobile surrogate mother on motor development, exploration, and reactions to novelty. Six infant rhesus macaques (Macaca mulatta) were reared on mobile hanging surrogates (MS) and compared to six infants reared on standard stationary rocking surrogates (RS) and to 9-15 infants reared with their biological mothers (MR) for early developmental outcome. We predicted that MS infants would develop more similarly to MR infants than RS infants. In neonatal assessments conducted at Day 30, both MS and MR infants showed more highly developed motor activity than RS infants on measures of grasping (p = .009), coordination (p = .038), spontaneous crawl (p = .009), and balance (p = .003). At 2-3 months of age, both MS and MR infants displayed higher levels of exploration in the home cage than RS infants (p = .016). In a novel situation in which only MS and RS infants were tested, MS infants spent less time near their surrogates in the first five minutes of the test session than RS infants (p = .05), indicating a higher level of comfort. Collectively, these results suggest that when nursery-rearing of infant monkeys is necessary, a mobile hanging surrogate may encourage more normative development of gross motor skills and exploratory behavior and may serve as a useful alternative to stationary or rocking surrogates.

  6. Toxic shock due to Streptococcus pyogenes in a rhesus monkey (Macaca mulatta).

    Science.gov (United States)

    García, Anapatricia; Paul, Katherine; Beall, Bernard; McClure, Harold

    2006-09-01

    Recent years have seen a worldwide resurgence in serious infections caused by group A streptococci. This group includes Streptococcus pyogenes, one of the most common pathogens among children which causes diverse suppurative infections, such as pharyngitis, as well as nonsuppurative infections with sequelae, such as rheumatoid fever and rheumatic heart disease. S. pyogenes produces several superantigen-like erythrogenic toxins, which are believed to be associated with pyrogenicity, erythromatous skin reactions, and various immunologic and cytotoxic effects. These toxins also can cause myocardial necrosis. In addition, recently reported streptococcal infections in obstetric human patients appear to be clinically different from classic puerperal sepsis. Here, we report a case of spontaneous streptococcal infection in a pregnant female rhesus monkey (Macaca mulatta). In addition to lesions consistent with bacteremia and toxic shock, this animal had severe cardiac lesions resembling those described in humans with rheumatic heart disease. S. pyogenes was isolated from intracardiac blood, liver, placenta, and fetal tissues. This isolate also had a unique M protein gene.

  7. Body signals during social play in free-ranging rhesus macaques (Macaca mulatta): A systematic analysis.

    Science.gov (United States)

    Yanagi, Akie; Berman, Carol M

    2014-02-01

    Social play involves one of the most sophisticated types of communication, that is, the use of play signals. Most primate research on play signals has focused on the use of the play face. However, some species appear to exhibit a variety of play signals. For example, rhesus monkeys (Macaca mulatta) have been reported to use body movements or postures that might have signal value during social play, in addition to the play face. However, it is not clear whether these body signals actually meet several criteria necessary to label them as "play signals." Here we examine the forms and possible functions of seven candidate signals that we observed exclusively during social play contexts among free-ranging rhesus monkeys on Cayo Santiago. We aim to (1) distinguish them from actual play behavior (play involving contact or chasing) using loglinear analysis and (2) determine whether they predict playful behavior using modified PC-MC methods. Two candidate signals did not resemble any behaviors used in actual play. The other five signals contained elements that lasted longer or increased their conspicuousness over similar play behaviors, suggesting ritualized characteristics. Youngsters were likely to initiate contact or chasing play significantly sooner after candidate signals than in their absence. Thus, these candidate signals appear to meet critical criteria of signals that promote, moderate or facilitate play. As such, these findings open the door to questions about why multiple play signals have evolved. © 2013 Wiley Periodicals, Inc.

  8. Positive reinforcement training as enrichment for singly housed rhesus macaques (Macaca mulatta).

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    Baker, K C; Bloomsmith, M A; Neu, K; Griffis, C; Maloney, M

    2010-08-01

    Positive reinforcement training is one component of behavioural management employed to improve psychological well-being. There has been regulatory promotion to compensate for restricted social housing in part by providing human interaction to singly caged primates, implying an efficacy standard for evaluating human interaction. The effect of positive reinforcement training on the behaviour of 61 singly housed laboratory rhesus macaques (Macaca mulatta) was evaluated at two large primate facilities. Training involved body part presentation and basic control behaviours. Baseline data were compared to two treatment phases presented in varying order across individuals, six minutes per week of positive reinforcement training and six minutes per week of unstructured human interaction. While a MANOVA involving behavioural categories and study conditions across study subjects was significant, univariate ANOVAs found no effect of phase within any behavioural category. Categorising subjects according to rearing, housing facility, or baseline levels of abnormal behaviour did not reveal changes in behaviour with positive reinforcement training or human interaction. This study failed to detect, to any degree, the types of behavioural changes documented in the scientific literature to result from pairing singly housed monkeys. Implementing short durations of positive reinforcement training across large numbers of singly housed animals may not be the most effective manner for incorporating positive reinforcement training in the behavioural management of laboratory macaques. Rather, directing efforts toward individuals with specific behavioural, management, clinical, research or therapeutic needs may represent a more fruitful approach to improving psychological well-being with this technique.

  9. Alterations in the upper facial growth of Macaca mulatta resulting from high-pull headgear.

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    Meldrum, R J

    1975-04-01

    Four prepubertal Macaca mulatta monkeys, ranging in age from 13 to 24 months, were used in an investigation of the effects of high-pull headgear (to a face-bow) therapy on the growth of the upper facial skeleton. Amalgam bone implants were placed across the frontomaxillary, frontozygomatic, zygomaticomaxillary, and zygomaticotemporal sutures in each animal. Three of the monkeys wore appliances consisting of a maxillary dental spling, a face-bow, two coil springs, and an acrylic helmet. The fourth monkey (control) wore only a dental splint and a face-bow. A continuous high-pull headgear force of 300 grams per side was applied to the three monkeys for 81, 87 and 89 days, respectively, before death. Procion brilliant red 8-HBS vital stain was administered to all four animals at the start of and 3 days before the end of the treatment period. The facial growth patterns were determined from lateral cephalograms taken before and after treatment, from direct measurement of implant separation at the sutures, and from histologic sections of the four mentioned facial sutures.

  10. Mimetic Muscles in a Despotic Macaque (Macaca mulatta) Differ from Those in a Closely Related Tolerant Macaque (M. nigra).

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    Burrows, Anne M; Waller, Bridget M; Micheletta, Jérôme

    2016-10-01

    Facial displays (or expressions) are a primary means of visual communication among conspecifics in many mammalian orders. Macaques are an ideal model among primates for investigating the co-evolution of facial musculature, facial displays, and social group size/behavior under the umbrella of "ecomorphology". While all macaque species share some social behaviors, dietary, and ecological parameters, they display a range of social dominance styles from despotic to tolerant. A previous study found a larger repertoire of facial displays in tolerant macaque species relative to despotic species. The present study was designed to further explore this finding by comparing the gross morphological features of mimetic muscles between the Sulawesi macaque (Macaca nigra), a tolerant species, and the rhesus macaque (M. mulatta), a despotic species. Five adult M. nigra heads were dissected and mimetic musculature was compared to those from M. mulatta. Results showed that there was general similarity in muscle presence/absence between the species as well as muscle form except for musculature around the external ear. M. mulatta had more musculature around the external ear than M. nigra. In addition, M. nigra lacked a zygomaticus minor while M. mulatta is reported to have one. These morphological differences match behavioral observations documenting a limited range of ear movements used by M. nigra during facial displays. Future studies focusing on a wider phylogenetic range of macaques with varying dominance styles may further elucidate the roles of phylogeny, ecology, and social variables in the evolution of mimetic muscles within Macaca Anat Rec, 299:1317-1324, 2016. © 2016 Wiley Periodicals, Inc.

  11. Anesthetic management in intrauterine surgery to evaluate an experimental model of myelomeningocele in non human primates (Macaca mulatta Anestesia em cirurgia intra-uterina para avaliar um modelo experimental de mielomeningocele em primatas não humanos (Macaca mulatta

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    Alfonso Galván-Montaño

    2010-06-01

    Full Text Available PURPOSE: Evaluate the anesthetic management in intrauterine surgery to induce myelomeningocele in non human primates Macaca mulatta. METHODS: A total of nine fetuses had intrauterine surgery; laminectomy was performed on them in L5 and L6. The studied variables were: maternal death, fetus death, cardiac frequency, respiratory frequency, arterial pressure, temperature, and oxygen saturation. RESULTS: No maternal or fetal deaths occurred; the only variable that was reported below the normal ranges was temperature. CONCLUSION: No maternal or fetal deaths occurred; the only variable that was reported below the normal ranges was temperature.OBJETIVO: Avaliar o manejo anestésico em cirurgia intra-uterina para induzir mielomeningocelo em primatas não humanos, Macaca mulatta. MÉTODOS: Operaram-se um total de nove fetos in útero que foram submetidos à laminectomia em L5 e L6. As variáveis a estudar foram mortes maternas ou fetais, freqüência cardíaca e respiratória, pressão arterial, temperatura e saturação de oxigênio. RESULTADOS: Não se apresentaram mortes maternas ou fetais, a temperatura se manteve abaixo dos 36°C, não tendo repercussões no bem-estar dos macacos. CONCLUSÃO: Não ocorreu nenhum óbito materno ou fetal, sendo que a única variável abaixo do normal foi a temperatura.

  12. Urinary excretion of cortisol from rhesus monkeys (Macaca mulatta) habituated to restraint

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    Wade, C. E.; Ortiz, R. M.

    1997-01-01

    Use of monkeys in research has often required that they be restrained in a chair. However, chair restraint can elicit an initial neuroendocrine stress response. Also, inactivity associated with restraint can induce muscular atrophy. We proposed that prior habituation of monkeys to chair restraint would attenuate these neuroendocrine responses without causing substantial muscle wasting. Four rhesus monkeys (Macaca mulatta) were trained and habituated to a restraint chair specifically designed for spaceflight. During the study, monkeys were placed in metabolic cages for 7 days (prerestraint, Phase I), placed in a chair restraint for 18 days (Phase II), and then returned to their metabolic cages for 5 days (postrestraint, Phase III). Urine was collected between 0700-1100 daily, and measurements of cortisol, creatinine, and electrolyte concentrations were adjusted for hourly excretion rates. Body weights of the monkeys did not change between start of the prerestraint and postrestraint phases (10.3 +/- 0.8 vs. 10.3 +/- 0.9 kg, respectively). During the 3 phases, mean excretion rate of cortisol did not change (24.1 +/- 10.3, 26.7 +/- 7.7, and 19.3 +/- 5.8 microg/h, respectively). Mean excretion rate of creatinine (37.3 +/- 7.5, 37.5 +/- 12.2, and 36.9 +/- 17.1 mg/h, respectively), Na+ (3.3 +/- 1.2, 3.2 +/- 1.2, 2.2 +/- 1.8 mmol/h, respectively), and K+ (5.3 +/- 1.8, 5.4 +/- 1.6, and 4.3 +/- 2.8 mmol/h, respectively) were also not altered. Lack of an increase in excreted urinary cortisol suggested that prior habituation to chair restraint attenuated neuroendocrine responses reported previously. Also, the chair restraint method used appeared to allow adequate activity, because the monkeys did not have indices of muscle wasting.

  13. Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta

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    Kanthaswamy S

    2008-05-01

    Full Text Available Abstract Background Rhesus macaques (Macaca mulatta are the primate most used for biomedical research, but phenotypic differences between Indian-origin and Chinese rhesus macaques have encouraged genetic methods for identifying genetic differences between these two populations. The completion of the rhesus genome has led to the identification of many single nucleotide polymorphisms (SNPs in this species. These single nucleotide polymorphisms have many advantages over the short tandem repeat (STR loci currently used to assay genetic variation. However, the number of currently identified polymorphisms is too small for whole genome analysis or studies of quantitative trait loci. To that end, we tested a combination of methods to identify large numbers of high-confidence SNPs, and screen those with high minor allele frequencies (MAF. Results By testing our previously reported single nucleotide polymorphisms, we identified a subset of high-confidence, high-MAF polymorphisms. Resequencing revealed a large number of regionally specific SNPs not identified through a single pyrosequencing run. By resequencing a pooled sample of four individuals, we reliably identified loci with a MAF of at least 12.5%. Finally, we found that when applied to a larger, geographically variable sample of rhesus, a large proportion of our loci were variable in both populations, and very few loci were ancestry informative. Despite this fact, the SNP loci were more effective at discriminating Indian and Chinese rhesus than STR loci. Conclusion Pyrosequencing and pooled resequencing are viable methods for the identification of high-MAF SNP loci in rhesus macaques. These SNP loci are appropriate for screening both the inter- and intra-population genetic variation.

  14. Factors increasing snake detection and perceived threat in captive rhesus macaques (Macaca mulatta).

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    Etting, Stephanie F; Isbell, Lynne A; Grote, Mark N

    2014-02-01

    The primary predators of primates are all ambush hunters, and yet felids, raptors, and snakes differ in aspects of their ecology that affect the evasive strategies of their primate prey. Felids and raptors can traverse long distances quickly, thus the urgency of threat they present increases as they come closer in proximity to primates. In contrast, snakes do not move rapidly over long distances, and so primates may be reasonably safe even at close distances provided snakes can be detected and monitored. We investigated the ability of captive rhesus macaques (Macaca mulatta) to detect snakes at distances ranging from 15 to 1.5 m. We also examined variation in intensity of perceived threat by applying a Hidden Markov Model to infer changes in underlying state from observable behaviors, that is, increased attention and mobbing. We found that the macaques often failed to detect snake models but that closer proximity improved snake detection, which is necessary before threat can be perceived. We also found that having only one individual in fairly close proximity (≤ 7.5 m) was sufficient to alert the rest of the group and so the chances of detection did not increase with increasing group size. Finally, we found that when the snakes were perceived, they did not elicit greater intensity of response with closer proximity. These results provide evidence that the threat from snakes is greatest when they are in proximity to primates but are unseen. When snakes are seen, however, distance appears not to affect primates' perceived risk, in contrast to their perceived risk from raptors and felids.

  15. No-scalpel vasectomy by electrocauterization in free range rhesus macaques (Macaca mulatta

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    A. Raj

    2012-02-01

    Full Text Available The objective of the study was to standardize a new method of vasectomy in male rhesus macaques (Macaca mulatta. A total of 208 free range male rhesus macaques captured from different locations in Shivalik Hills in a population control programme of the rhesus macaques in India. General anaesthesia was achieved by using a combination of ketamine hydrochloride at 8 mg/kg body weight and xylazine hydrochloride at 2mg/kg body weight intramuscularly in squeeze cage. Surgical procedure of vasectomy was carried out by single-hole no-scalpel technique using a single pre-scrotal skin incision above the median raphae. Spermatic cord was grasped with ringed forceps and was pulled out through the single-hole incision. Vas deferens was separated from the artery-vein complexus and about 3-4 cm portion of vas deferens was resected. Cauterization of both ends of the vas deferens was achieved with electrocautery. The induction time for anaesthesia was 1.40±0.18 min while surgical time for vasectomy was found to be 5.09±0.22 min. Recovery from general anaesthesia was without side-effects after a mean duration of 36.07±1.22 min, whereas the duration of anaesthesia was observed to be 82.27±4.96 min. There were no major complications following the surgery and recovery of animals was smooth. Animals were kept in postoperative care for five days and released at the same capturing site.

  16. Diversity and molecular phylogeny of mitochondrial DNA of rhesus macaques (Macaca mulatta) in Bangladesh.

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    Hasan, M Kamrul; Feeroz, M Mostafa; Jones-Engel, Lisa; Engel, Gregory A; Kanthaswamy, Sree; Smith, David Glenn

    2014-11-01

    While studies of rhesus macaques (Macaca mulatta) in the eastern (e.g., China) and western (e.g., India) parts of their geographic range have revealed major genetic differences that warrant the recognition of two different subspecies, little is known about genetic characteristics of rhesus macaques in the transitional zone extending from eastern India and Bangladesh through the northern part of Indo-China, the probable original homeland of the species. We analyzed genetic variation of 762 base pairs of mitochondrial DNA from 86 fecal swab samples and 19 blood samples from 25 local populations of rhesus macaque in Bangladesh collected from January 2010 to August 2012. These sequences were compared with those of rhesus macaques from India, China, and Myanmar. Forty-six haplotypes defined by 200 (26%) polymorphic nucleotide sites were detected. Estimates of gene diversity, expected heterozygosity, and nucleotide diversity for the total population were 0.9599 ± 0.0097, 0.0193 ± 0.0582, and 0.0196 ± 0.0098, respectively. A mismatch distribution of paired nucleotide differences yielded a statistically significantly negative value of Tajima's D, reflecting a population that rapidly expanded after the terminal Pleistocene. Most haplotypes throughout regions of Bangladesh, including an isolated region in the southwestern area (Sundarbans), clustered with haplotypes assigned to the minor haplogroup Ind-2 from India reflecting an east to west dispersal of rhesus macaques to India. Haplotypes from the southeast region of Bangladesh formed a cluster with those from Myanmar, and represent the oldest rhesus macaque haplotypes of Bangladesh. These results are consistent with the hypothesis that rhesus macaques first entered Bangladesh from the southeast, probably from Indo-China, then dispersed westward throughout eastern and central India.

  17. Rhesus monkeys (Macaca mulatta detect rhythmic groups in music, but not the beat.

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    Henkjan Honing

    Full Text Available It was recently shown that rhythmic entrainment, long considered a human-specific mechanism, can be demonstrated in a selected group of bird species, and, somewhat surprisingly, not in more closely related species such as nonhuman primates. This observation supports the vocal learning hypothesis that suggests rhythmic entrainment to be a by-product of the vocal learning mechanisms that are shared by several bird and mammal species, including humans, but that are only weakly developed, or missing entirely, in nonhuman primates. To test this hypothesis we measured auditory event-related potentials (ERPs in two rhesus monkeys (Macaca mulatta, probing a well-documented component in humans, the mismatch negativity (MMN to study rhythmic expectation. We demonstrate for the first time in rhesus monkeys that, in response to infrequent deviants in pitch that were presented in a continuous sound stream using an oddball paradigm, a comparable ERP component can be detected with negative deflections in early latencies (Experiment 1. Subsequently we tested whether rhesus monkeys can detect gaps (omissions at random positions in the sound stream; Experiment 2 and, using more complex stimuli, also the beat (omissions at the first position of a musical unit, i.e. the 'downbeat'; Experiment 3. In contrast to what has been shown in human adults and newborns (using identical stimuli and experimental paradigm, the results suggest that rhesus monkeys are not able to detect the beat in music. These findings are in support of the hypothesis that beat induction (the cognitive mechanism that supports the perception of a regular pulse from a varying rhythm is species-specific and absent in nonhuman primates. In addition, the findings support the auditory timing dissociation hypothesis, with rhesus monkeys being sensitive to rhythmic grouping (detecting the start of a rhythmic group, but not to the induced beat (detecting a regularity from a varying rhythm.

  18. A behavioral taxonomy of loneliness in humans and rhesus monkeys (Macaca mulatta.

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    John P Capitanio

    Full Text Available Social relationships endow health and fitness benefits, but considerable variation exists in the extent to which individuals form and maintain salutary social relationships. The mental and physical health effects of social bonds are more strongly related to perceived isolation (loneliness than to objective social network characteristics. We sought to develop an animal model to facilitate the experimental analysis of the development of, and the behavioral and biological consequences of, loneliness. In Study 1, using a population-based sample of older adults, we examined how loneliness was influenced both by social network size and by the extent to which individuals believed that their daily social interactions reflected their own choice. Results revealed three distinct clusters of individuals: (i individuals with large networks who believed they had high choice were lowest in loneliness, (ii individuals with small social networks who believed they had low choice were highest in loneliness, and (iii the remaining two groups were intermediate and equivalent in loneliness. In Study 2, a similar three-group structure was identified in two separate samples of adult male rhesus monkeys (Macaca mulatta living in large social groups: (i those high in sociability who had complex social interaction with a broad range of social partners (putatively low in loneliness, (ii those low in sociability who showed tentative interactions with certain classes of social partners (putatively high in loneliness, and (iii those low in sociability who interacted overall at low levels with a broad range of social partners (putatively low or intermediate in loneliness. This taxonomy in monkeys was validated in subsequent experimental social probe studies. These results suggest that, in highly social nonhuman primate species, some animals may show a mismatch between social interest and social attainment that could serve as a useful animal model for experimental and

  19. Cloning and high level expression of the biologically active extracellular domain of Macaca mulatta CD40 in Pichia pastoris.

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    Zhu, Shengyun; Wan, Lin; Yang, Hao; Cheng, Jingqiu; Lu, Xiaofeng

    2016-03-01

    The CD40-mediated immune response contributes to a wide variety of chronic inflammatory diseases. CD40 antagonists have potential as novel therapies for immune disorders. However, the CD40 pathway has not been well characterized in the rhesus monkey Macaca mulatta, which is a valuable animal model for human immune disease. An 834 bp transcript was cloned from peripheral blood mononuclear cells (PBMCs) of rhesus monkey using specific primers designed according to the predicted sequence of M. mulatta CD40 (mmCD40) in GenBank. Sequence analysis demonstrated that mmCD40 is highly homologous to human CD40 (hCD40), with an amino acid sequence identity of 94%. Genes encoding the extracellular domain of mmCD40 and the Fc fragment of the hIgG1 were inserted into a pPIC9K plasmid to produce mmCD40Ig by Pichia pastoris. Approximately 15-20 mg of the mmCD40Ig protein with ∼90% purity could be recovered from 1 L of culture. The purified mmCD40Ig protein can form dimers and can specifically bind CD40L-positive cells. Additionally, the mmCD40Ig protein can bind hCD40L protein in phosphate buffered saline and form a stable combination in a size-exclusion chromatography assay using a Superdex 200 column. Moreover, mmCD40Ig is as efficient as M. mulatta CTLA4Ig (mmCTLA4Ig) to suppress Con A-stimulated lymphocyte proliferation. Additionally, mmCD40Ig only showed mild immunosuppressive activity in a one-way mixed lymphocyte reaction (MLR) system. These results suggest that mmCD40Ig secreted by P. pastoris was productive and functional, and it could be used as a tool for pathogenesis and therapies for chronic inflammatory diseases in a M. mulatta model.

  20. Mitochondrial DNA variation in Chinese and Indian rhesus macaques (Macaca mulatta).

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    Smith, David Glenn; McDonough, John

    2005-01-01

    DNA was extracted from the buffy coats or serum of 212 rhesus macaques (Macaca mulatta) sampled throughout the species' geographic range. An 835 base pair (bp) fragment of mitochondrial DNA (mtDNA) was amplified from each sample, sequenced, aligned, and used to estimate genetic distances from which phylogenetic trees were constructed. A tree that included sequences from rhesus macaques whose exact origins in China are known was used to determine the regional origin of clusters of haplotypes, or haplogroups, defined by the trees. Indian rhesus sequences formed one large homogeneous haplogroup with very low levels of nucleotide diversity and no geographic structure, and a second much smaller haplogroup apparently derived from Burma. The sequences from Burma and eastern and western China were quite divergent from those in the major haplogroup of India. Each of these sequences formed separate clusters of haplotypes that exhibited far greater nucleotide diversity and/or population structure. Correspondingly, sequences from Indian rhesus macaques that are considered to represent different subspecies (based on morphological differences) were intermingled in the tree, while those from China reflected some, but not all, aspects of subspecific taxonomy. Regional variation contributed 72% toward the paired differences between sequences in an analysis of molecular variance (AMOVA), and the average differences between the populations of eastern and western China were also statistically significant. These results suggest that Indian and Chinese rhesus macaques were reproductively isolated during most, if not all, of the Pleistocene, during which time Indian rhesus macaques experienced a severe genetic bottleneck, and that some gene flow westward into India was subsequently reestablished. Samples from breeding centers in three different provinces of China included sequences from rhesus macaques that originated in both eastern (or southern) and western China, confirming anecdotal

  1. Contrasting the edge- and surface-based theories of object recognition: behavioral evidence from macaques (Macaca mulatta).

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    Parron, Carole; Washburn, David

    2010-01-01

    This study assessed the contribution of edge and surface cues on object representation in macaques (Macaca mulatta). In Experiments 1 and 2, 5 macaques were trained to discriminate 4 simple volumetric objects (geons) and were subsequently tested for their ability to recognize line drawings, silhouettes, and light changes of these geons. Performance was above chance in all test conditions and was similarly high for the line drawings and silhouettes of geons, suggesting the use of the outline shape to recognize the original objects. In addition, transfer for the geons seen under new lighting was greater than for the other stimuli, stressing the importance of the shading information. Experiment 3, using geons filled with new textures, showed that a radical change in the surface cues does not prevent object recognition. It is concluded that these findings support a surface-based theory of object recognition in macaques, although it does not exclude the contribution of edge cues, especially when surface details are not available.

  2. Evidence of Placentophagia and Mother-Infant Cannibalism in Free-Ranging Macaca mulatta tcheliensis in Mount Taihangshan, Jiyuan, China.

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    Tian, Jundong; Zhang, Shiqiang; Guo, Yongman; Garber, Paul A; Guo, Weijie; Kuang, San''ao; Lu, Jiqi

    2016-01-01

    Placentophagia or the consumption of the afterbirth is reported in many primate species, whereas cannibalism is a relatively rare event. Based on our field observations over the course of 3 years, we present evidence of placentophagia and mother-infant cannibalism in a free-ranging population of the Taihangshan macaque, Macaca mulatta tcheliensis, in the Mt. Taihangshan area, Jiyuan, Henan, China. We documented 1 case in which a mother consumed the afterbirth of her infant. In a second instance, we observed a fresh placenta discarded on the ground by an unknown individual. We also present a description of the first documented instance of mother-infant cannibalism in the same group of free-ranging rhesus macaques. © 2017 S. Karger AG, Basel.

  3. Locally infiltrative ameloblastic fibroma in a rhesus macaque (Macaca mulatta) with characterizations of its proliferating activity and biological behavior.

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    Liu, David X; Doyle, Lara A; Bouljihad, Mostafa T; Didier, Peter J; Gilbert, Margaret H; Wang, Xiaolei; Pahar, Bapi; Bohm, Rudolf P; Veazey, Ronald S; Lackner, Andrew A

    2012-05-01

    An 8-year-old male rhesus macaque (Macaca mulatta) presented with unilateral enlargement of the left mandible. Radiographs revealed a marked expansion of the left mandible with a multilocular radiolucent mass with abundant osteolysis. The mass was grossly firm, fleshy, and gelatinous on the cut surface. Histologically, the mass was locally infiltrative and composed of neoplastic epithelial and mesenchymal components that stained positive for cytokeratin and vimentin, respectively. Occasional densely spherical condensations of fibroblasts resembling the cap stage of odontogenesis were present in the mesenchyma. Immunohistochemical staining with Ki-67, S-100, and CD34 indicated that both epithelial and mesenchymal components of the neoplasm had low proliferation. Alcian blue, periodic acid-Schiff, and trichrome stains showed an immature stromal component with no collagen formation. Based on the clinical, histologic, and immunophenotypic features, the tumor was identified as a locally infiltrative ameloblastic fibroma.

  4. Comparison of noncontact infrared thermometry and 3 commercial subcutaneous temperature transponding microchips with rectal thermometry in rhesus macaques (Macaca mulatta).

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    Brunell, Marla K

    2012-07-01

    This study compared a noncontact infrared laser thermometer and 3 different brands of subcutaneous temperature transponding microchips with rectal thermometry in 50 rhesus macaques (Macaca mulatta). The data were analyzed by using intraclass correlation coefficients and limits of agreement. In addition, the technical capabilities and practicality of the thermometers in the clinical setting were reviewed. None of the alternative techniques investigated was equivalent to rectal thermometry in rhesus macaques. Temperatures obtained by using microchips had higher correlation and agreed more closely with rectal temperatures than did those obtained by the noncontact infrared method. However, transponding microchips did not yield consistent results. Due to difficulty in positioning nonsedated macaques in their homecage, subcutaneous microchips were not practical in the clinical setting. Furthermore, pair-housed macaques may be able to break or remove microchips from their cagemates.

  5. Eosinophilic bronchitis-like lesion as the cause of death in a Macaca mulatta: a first case report

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    Christal, J.L.; Hubbard, G.B.; Dick, E.J.; Brasky, K.M.; Jagirdar, J.

    2009-01-01

    Background Eosinophilic bronchitis is a recently described, relatively benign condition in humans that is characterized by a corticosteroid-responsive chronic cough and sputum eosinophilia without the abnormalities of airway function seen in asthma. The exact cause of this condition is currently unknown, however has been associated with various occupational exposures in humans. It has also been reported to progress to irreversible airway obstruction. This disease has been reported in dogs and horses, but not in non-human primates. Methods Gross examination of an otherwise healthy 13-year-old, colony-born Macaca mulatta, which died of severe non-responsive respiratory distress revealed that the lungs were markedly inflated and moist. Results Hematoxylin and eosin-stained sections from the lungs contained widespread accumulation of eosinophils, sloughed epithelial cells, and mucus centered around bronchioles and adjacent airways. There was no evidence of mast cell infiltration of peribronchiolar smooth muscle, goblet cell hyperplasia, or basement membrane thickening. Conclusions This ruled out recurrent episodes as would be expected in asthma, favoring the diagnosis of an eosinophilic bronchitis-like lesion. We report a first case of eosinophilic bronchitis-like features in a M. mulatta. PMID:18333916

  6. Facial paralysis and lymphocytic facial neuritis in a rhesus macaque (Macaca mulatta) positive for simian retrovirus type D2.

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    Hampton, Anna L; Colby, Lesley A; Bergin, Ingrid L

    2011-12-01

    Simian retrovirus type D (SRVD) is a naturally occurring betaretrovirus in nonhuman primates of the genus Macaca. Infection can lead to a variety of clinical, hematologic, and histopathologic abnormalities. We report an unusual clinical presentation of facial paralysis and histologic lymphocytic neuritis in an SRVD type 2 (SRVD2)-infected rhesus macaque (Macaca mulatta) with a catheter-associated vena caval thrombus, anemia, thrombocytopenia, and multisystemic lymphoid hyperplasia. At initial presentation, a right atrial mass was detected by echocardiography. The macaque was clinically asymptomatic but had persistent anemia, thrombocytopenia, hyperglobulinemia, and later neutropenia. It was seropositive for SRV and PCR-positive for SRVD 2. Approximately 1 mo after initial presentation, the macaque developed right facial paralysis and was euthanized. Histologic lesions included lymphoplasmacytic aggregates affecting multiple organs, consistent with SRV-related lymphoid hyperplasia. The right facial nerve showed lymphoplasmacytic inflammation. The nerve itself was negative immunohistochemically for SRV antigen, but antigen was present infrequently in pericapillary lymphoid cells within the facial nerve and abundantly within lymphoid aggregates in the adjacent parotid salivary gland, bone marrow, and soft tissue. Known neurotropic viruses could not be identified. Given the widespread inflammation in this macaque, particularly in the area surrounding the facial nerve, lymphocytic neuritis and facial paralysis likely were an indirect effect of SRV infection due to local extension of SRV-related inflammation in the surrounding tissue.

  7. Piracetam-induced changes on the brainstem auditory response in anesthetized juvenile rhesus monkeys (Macaca mulatta). Report of two clinical cases.

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    Durand-Rivera, A; Gonzalez-Pina, R; Hernandez-Godinez, B; Ibanez-Contreras, A; Bueno-Nava, A; Alfaro-Rodriguez, A

    2012-10-01

    We describe two clinical cases and examine the effects of piracetam on the brainstem auditory response in infantile female rhesus monkeys (Macaca mulatta). We found that the interwave intervals show a greater reduction in a 3-year-old rhesus monkey compared to a 1-year-old rhesus monkey. In this report, we discuss the significance of these observations. © 2012 John Wiley & Sons A/S.

  8. Fasting induced kisspeptin signaling suppression is regulated by glutamate mediated cues in adult male rhesus macaque (Macaca mulatta).

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    Shamas, Shazia; Khan, Saeed-Ul-Hassan; Khan, Muhammad Yousaf; Shabbir, Nadia; Zubair, Hira; Shafqat, Saira; Wahab, Fazal; Shahab, Muhammad

    2015-08-01

    Kisspeptin signaling is suppressed by short term fasting. It has been reported that hypothalamic Kiss1 and Kiss1r mRNA expression decreased after 48h of fasting in male rhesus monkey. But the mechanism involved in the reduction of kisspeptin signaling after 48h of fasting is unknown. Recent studies have suggested the role of afferent excitatory and inhibitory pathways in the regulation of kisspeptin neurons. Therefore, this study was designed to observe the changes in the glutamate and GABA signaling during fed and 48h fasting states by performing immunofluorescence to examine the interaction of kisspeptin neurons with NR1 subunit of NMDA receptors and by performing SYBR green qRT-PCR to measure and quantify the levels of Kiss1, Kiss1r, NR1 and GAD67 mRNA in the POA and MBH of adult male rhesus macaque (Macaca mulatta) during 48h of fasting (n=2) and fed ad libitum (n=2). Plasma testosterone (pfasting. Our results clearly showed that expression of hypothalamic Kiss1, Kiss1r and NR1 mRNA was significantly (pfasting. These observations suggest that decreased kisspeptin signaling during fasting may occur due to reduction in glutamatergic inputs to kisspeptin neurons. Our results also suggest that fasting induced suppression of kisspeptin signaling is not mediated through GABAergic neurons.

  9. Neonatal imitation predicts infant rhesus macaque (Macaca mulatta) social and anxiety-related behaviours at one year

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    Kaburu, Stefano S. K.; Paukner, Annika; Simpson, Elizabeth A.; Suomi, Stephen J.; Ferrari, Pier F.

    2016-01-01

    The identification of early markers that predict the development of specific social trajectories is critical to understand the developmental and neurobiological underpinnings of healthy social development. We investigated, in infant rhesus macaques (Macaca mulatta), whether newborns’ capacity to imitate facial gestures is a valid predictive marker for the emergence of social competencies later in development, at one year of age. Here we first assessed whether infant macaques (N = 126) imitate lipsmacking gestures (a macaque affiliative expression) performed by a human experimenter in their first week of life. We then collected data on infants’ social interactions (aggression, grooming, and play) and self-scratching (a proxy indicator of anxiety) at 11–14 months when infants were transferred into a new enclosure with a large social group. Our results show that neonatal imitators exhibit more dominant behaviours, are less anxious, and, for males only, spend more time in play at one year old. These findings suggest that neonatal imitation may be an early predictor of infant sociality and may help identify infants at risk of neurodevelopmental social deficits. PMID:27725768

  10. Expression analysis of taste signal transduction molecules in the fungiform and circumvallate papillae of the rhesus macaque, Macaca mulatta.

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    Yoshiro Ishimaru

    Full Text Available The molecular mechanisms of the mammalian gustatory system have been examined in many studies using rodents as model organisms. In this study, we examined the mRNA expression of molecules involved in taste signal transduction in the fungiform papillae (FuP and circumvallate papillae (CvP of the rhesus macaque, Macaca mulatta, using in situ hybridization. TAS1R1, TAS1R2, TAS2Rs, and PKD1L3 were exclusively expressed in different subsets of taste receptor cells (TRCs in the FuP and CvP. This finding suggests that TRCs sensing different basic taste modalities are mutually segregated in macaque taste buds. Individual TAS2Rs exhibited a variety of expression patterns in terms of the apparent level of expression and the number of TRCs expressing these genes, as in the case of human TAS2Rs. GNAT3, but not GNA14, was expressed in TRCs of FuP, whereas GNA14 was expressed in a small population of TRCs of CvP, which were distinct from GNAT3- or TAS1R2-positive TRCs. These results demonstrate similarities and differences between primates and rodents in the expression profiles of genes involved in taste signal transduction.

  11. Individual differences in scanpaths correspond with serotonin transporter genotype and behavioral phenotype in rhesus monkeys (Macaca mulatta

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    Robert R Gibboni

    2009-11-01

    Full Text Available Scanpaths (the succession of fixations and saccades during spontaneous viewing contain information about the image but also about the viewer. To determine the viewer-dependent factors in the scanpaths of monkeys, we trained three adult males (Macaca mulatta to look for 3 s at images of conspecific facial expressions with either direct or averted gaze. The subjects showed significant differences on four basic scanpath parameters (number of fixations, fixation duration, saccade length, and total scanpath length when viewing the same facial expression/gaze direction combinations. Furthermore, we found differences between monkeys in feature preference and in the temporal order in which features were visited on different facial expressions. Overall, the between-subject variability was larger than the within- subject variability, suggesting that scanpaths reflect individual preferences in allocating visual attention to various features in aggressive, neutral, and appeasing facial expressions. Individual scanpath characteristics were brought into register with the genotype for the serotonin transporter regulatory gene (5-HTTLPR and with behavioral characteristics such as expression of anticipatory anxiety and impulsiveness/hesitation in approaching food in the presence of a potentially dangerous object.

  12. Associations between Parity, Hair Hormone Profiles during Pregnancy and Lactation, and Infant Development in Rhesus Monkeys (Macaca mulatta).

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    Dettmer, Amanda M; Rosenberg, Kendra L; Suomi, Stephen J; Meyer, Jerrold S; Novak, Melinda A

    2015-01-01

    Studies examining hormones throughout pregnancy and lactation in women have been limited to single, or a few repeated, short-term measures of endocrine activity. Furthermore, potential differences in chronic hormonal changes across pregnancy/lactation between first-time and experienced mothers are not well understood, especially as they relate to infant development. Hormone concentrations in hair provide long-term assessments of hormone production, and studying these measures in non-human primates allows for repeated sampling under controlled conditions that are difficult to achieve in humans. We studied hormonal profiles in the hair of 26 female rhesus monkeys (Macaca mulatta, n=12 primiparous), to determine the influences of parity on chronic levels of cortisol (hair cortisol concentration, HCC) and progesterone (hair progesterone concentration, HPC) during early- to mid-pregnancy (PREG1), in late pregnancy/early lactation (PREG2/LACT1), and in peak lactation (LACT2). We also assessed infants' neurobehavioral development across the first month of life. After controlling for age and stage of pregnancy at the first hair sampling period, we found that HCCs overall peaked in PREG2/LACT1 (p=0.02), but only in primiparous monkeys (ppregnancy and lactation for all monkeys (phormonal profiles and infant development. These effects may, in part, reflect differential reproductive and maternal effort in mothers with varied caretaking experience. In addition, infant exposure to relatively higher levels of maternal cortisol during the late fetal and early postnatal periods is predictive of poorer developmental outcomes.

  13. Cashing out: The decisional flexibility of uncertainty responses in rhesus macaques (Macaca mulatta) and humans (Homo sapiens).

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    Zakrzewski, Alexandria C; Perdue, Bonnie M; Beran, Michael J; Church, Barbara A; Smith, J David

    2014-10-01

    Researchers are exploring whether animals share with humans something like a metacognitive capacity. Though some results point to human-animal continuities in this domain, they face the dominant criticism that animals' performances might be associative. A persistent problem is that animal-metacognition paradigms present static environments of risk and reward that may foster inflexible and conditioned responding. Those environments do not challenge animals to show the flexibility in their decision strategies that could indicate an antecedent capacity to metacognition. Accordingly, we tested macaques and humans on an uncertainty-monitoring paradigm in which risk changed dynamically. Participants classified stimuli of different difficulties while also choosing when to use a cashout response to collect the accumulated rewards that would be forfeit on a discrimination error. Macaques (Macaca mulatta) and humans flexibly adjusted their decision criteria to achieve appropriate protection against the cost of error that could differ depending on trial difficulty and the number of rewards at risk. In particular, monkeys widened their cashout-response region as their accumulated rewards increased, providing more protection against a more costly error. These findings demonstrate a new continuity between humans' and animals' uncertainty systems. They reveal a calibration by macaques of present risk to trial difficulty tolerated. They show that animals' uncertainty-monitoring and risk-management systems have substantial trial-by-trial flexibility.

  14. Behavioural and pharmacokinetic studies in the monkey (Macaca mulatta) with diazepam, nordiazepam and related 1,4-benzodiazepines.

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    Curry, S H; Whelpton, R; Nicholson, A N; Wright, C M

    1977-11-01

    1. Behavioural activity (delayed differentiation and spatial delayed alternation) and pharmacokinetics of diazepam and its metabolites, N-desmethyldiazepam (nordiazepam), 3-hydroxydiazepam (temazepam) and 3-hydroxy-N-desmethyldiazepam (oxazepam), and of dipotassium clorazepate (clorazepate), were studied in the monkey (Macaca mulatta). Diazepam and its metabolites (1.8 and 3.0 mg/kg) and clorazepate (2.6 and 4.3 mg/kg) were given by intraperitoneal injection. 2. Hydroxylation of diazepam (temazepam and oxazepam) led to a loss of, or a considerable reduction in, behavioural activity, whereas activity was preserved, though modified, by demethylation (nordiazepam). It was not possible to establish change in behaviour at specific time intervals after clorazepate, but combined performance data revealed an effect. 3. The maximum mean plasma concentrations of diazepam, temazepam, oxazepam and clorazepate were observed at 0.5 h, and the maximum mean plasma concentration of nordiazepam was observed at 1 hour. Plasma concentrations of nordiazepam were the highest and decreased monoexponentially. Plasma concenqrations of the other drugs declined rapidly at first but more slowly later, and these data were analysed as biexponential models. In the analysis for metabolites, nordiazepam reached measurable levels after the injection of diazepam and clorazepate. 4. It is suggested that differences in the effects of closely related benzodiazepines may not be due solely to their plasma pharmacokinetic properties, but may arise from differences in their intrinsic activity.

  15. Rhesus monkeys (Macaca mulatta) discriminate between knowing and not knowing and collect information as needed before acting.

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    Hampton, Robert R; Zivin, Aaron; Murray, Elisabeth A

    2004-10-01

    Humans use memory awareness to determine whether relevant knowledge is available before acting, as when we determine whether we know a phone number before dialing. Such metacognition, or thinking about thinking, can improve selection of appropriate behavior. We investigated whether rhesus monkeys ( Macaca mulatta) are capable of a simple form of metacognitive access to the contents of short-term memory. Monkeys chose among four opaque tubes, one of which concealed food. The tube containing the reward varied randomly from trial to trial. On half the trials the monkeys observed the experimenter baiting the tube, whereas on the remaining trials their view of the baiting was blocked. On each trial, monkeys were allowed a single chance to select the tube containing the reward. During the choice period the monkeys had the opportunity to look down the length of each tube, to determine if it contained food. When they knew the location of the reward, most monkeys chose without looking. In contrast, when ignorant, monkeys often made the effort required to look, thereby learning the location of the reward before choosing. Looking improved accuracy on trials on which monkeys had not observed the baiting. The difference in looking behavior between trials on which the monkeys knew, and trials on which they were ignorant, suggests that rhesus monkeys discriminate between knowing and not knowing. This result extends similar observations made of children and apes to a species of Old World monkey, suggesting that the underlying cognitive capacities may be widely distributed among primates.

  16. Large-scale analysis of Macaca fascicularis transcripts and inference of genetic divergence between M. fascicularis and M. mulatta

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    Sugano Sumio

    2008-02-01

    Full Text Available Abstract Background Cynomolgus macaques (Macaca fascicularis are widely used as experimental animals in biomedical research and are closely related to other laboratory macaques, such as rhesus macaques (M. mulatta. We isolated 85,721 clones and determined 9407 full-insert sequences from cynomolgus monkey brain, testis, and liver. These sequences were annotated based on homology to human genes and stored in a database, QFbase http://genebank.nibio.go.jp/qfbase/. Results We found that 1024 transcripts did not represent any public human cDNA sequence and examined their expression using M. fascicularis oligonucleotide microarrays. Significant expression was detected for 544 (51% of the unidentified transcripts. Moreover, we identified 226 genes containing exon alterations in the untranslated regions of the macaque transcripts, despite the highly conserved structure of the coding regions. Considering the polymorphism in the common ancestor of cynomolgus and rhesus macaques and the rate of PCR errors, the divergence time between the two species was estimated to be around 0.9 million years ago. Conclusion Transcript data from Old World monkeys provide a means not only to determine the evolutionary difference between human and non-human primates but also to unveil hidden transcripts in the human genome. Increasing the genomic resources and information of macaque monkeys will greatly contribute to the development of evolutionary biology and biomedical sciences.

  17. Generalization hypothesis of abstract-concept learning: learning strategies and related issues in Macaca mulatta, Cebus apella, and Columba livia.

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    Wright, Anthony A; Katz, Jeffrey S

    2007-11-01

    The generalization hypothesis of abstract-concept learning was tested with a meta-analysis of rhesus monkeys (Macaca mulatta), capuchin monkeys (Cebus apella), and pigeons (Columba livia) learning a same/different (S/D) task with expanding training sets. The generalization hypothesis states that as the number of training items increases, generalization from the training pairs will increase and could explain the subjects' accurate novel-stimulus transfer. By contrast, concept learning is learning the relationship between each pair of items; with more training items subjects learn more exemplars of the rule and transfer better. Having to learn the stimulus pairs (the generalization hypothesis) would require more training as the set size increases, whereas learning the concept might require less training because subjects would be learning an abstract rule. The results strongly support concept or rule learning despite severely relaxing the generalization-hypothesis parameters. Thus, generalization was not a factor in the transfer from these experiments, adding to the evidence that these subjects were learning the S/D abstract concept.

  18. 猕猴脱毛的营养学因素分析%Analysis on the Nutriology Parameters of Shed in Macaca mulatta

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    鲁帅尧; 和占龙; 陈丽雄; 赵远; 禹文海; 王俊斌; 杨凤梅

    2011-01-01

    Objective To improve and prevent shed of Macaca mulatta by comparison and analysis the nutriology parameters. Methods Macaca mulatta was divided into A, B and C group according to condition of their hair. Hair and serum were collected to determine trace elements, amino acid and mineral in serum. Results The content of Mn, Zn, Pb and As in hair show extremely significant difference (P <0. 01 ), but no significant change in the content of Cu and Fe (P >0. 05). The content of Pro, Val, NH3, Arg, Tyr, Gystine, Phe, Lys, His and total amino acids in hair show extremely significant difference (P <0. 01 ). The content of trace element in serum was no big change, except Mg, P, Cu and Ca in A and B groups were higher than C group. Conclusion The quantity of Mn and Zn in addition maybe the reason caused Macaca mulatta shed. Gystine may improve and enhance the hair quantity; Ca, Mg, P and Cu possibly can affect the hair quantity in artificial raising Macaca mulatta when fed in high nutritional level.%目的 通过对猕猴脱毛的相关营养学指标的比较分析,为改善人工饲养猕猴脱毛状况及其防治提供参考数据.方法 根据被毛状况分组A、B、C,采集试验猴被毛和血清,测定其微量元素和氨基酸以及血清矿物元素,对各组相应指标进行比较分析.结果 各组试验猴被毛Cu、Fe含量无显著性差异(P>0.05),但Mn、Zn、Pb、As则均有极显著性差异(P0.05).A、B组的血清Mg、P、Cu和Ca的含量高于C组,其余矿物元素的含量基本一致.结论 Mn过量、Zn的供给不足可能是影响人工饲养猕猴被毛质量的因素;胱氨酸对改善猕猴被毛品质、提高被毛质量应该有一定作用;高营养水平的Ca、Mg、P和Cu可能会影响人工饲养的猕猴的被毛质量.

  19. Early involvement in friendships predicts later plasma concentrations of oxytocin and vasopressin in juvenile rhesus macaques (Macaca mulatta

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    Tamara Aliza Rachel Weinstein

    2014-08-01

    Full Text Available The neuropeptides oxytocin (OT and vasopressin (AVP are involved in social bonding in attachment relationships, but their role in friendship is poorly understood. We investigated whether rhesus macaques’ (Macaca mulatta friendships at age one predicted plasma OT and AVP at two later time points. Subjects were 54 rhesus macaques at the California National Primate Research Center. Blood was drawn during a brief capture-and-release in the home cage, and plasma assayed for OT and AVP using an enzyme immunoassay. Separate linear mixed models for each sex tested the effects of dominance rank, age, sampling time point, housing condition, parturition status, two blood draw timing measures, and five friendship types: proximity friendships, play friendships, reciprocal friendships (a preference for a peer that also preferred the subject, multiplex friendships (friendships displayed in more than one behavioral domain, and total number of friendships. Females’ number of reciprocal and play friendships at age one significantly predicted later OT; additionally, these two friendship types interacted with rank, such that high-ranking females with the fewest friendships had the highest OT concentrations. Friendship did not predict later OT levels in males, however proximity, play, reciprocal, and total number of friendships predicted males’ plasma AVP. Play and total number of friendships also tended to predict AVP in females. Our results show that peripheral measures of neuroendocrine functioning in juvenile rhesus monkeys are influenced by early involvement in friendships. Friendships have an especially strong impact on an individual’s psychosocial development, and our data suggest OT and AVP as potential underlying mechanisms. Moreover, sex differences in the functioning of the OT and AVP systems, and their relation to friendship, may have important clinical implications for the use of OT as a therapeutic, as well as informing the social context in

  20. High-fat diet combined with low-dose streptozotocin injections induces metabolic syndrome in Macaca mulatta.

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    Li, Linzhao; Liao, Guangneng; Yang, Guang; Lu, Yanrong; Du, Xiaojiong; Liu, Jingping; Li, Lan; Wang, Chengshi; Li, Li; Ren, Yan; Zhong, Zhihui; Cheng, Jingqiu; Chen, Younan

    2015-08-01

    Metabolic syndrome (MetS) is associated with abdominal obesity, hyperlipidemia, insulin resistance, and type 2 diabetes mellitus, and increases the risk of cardiovascular disease. Given the complex multifactorial pathogenesis of MetS, qualified animal models are currently seriously limited for researchers. The aim of our study was to develop a MetS model in juvenile rhesus monkeys (Macaca mulatta). Rhesus monkeys (1-year-old) fed a high-fat diet (15 % fat, 2 % cholesterol) were used as the HF group (n = 6), and those on a normal diet (5 % fat) were used as the control group (n = 4). After being fed a high-fat diet for approximately 12 months, 2 monkeys (HF + STZ group) were injected with low-dose streptozotocin (STZ, 25 mg/kg) twice, with a 7 days interval, and were then fed the same diet continuously for another 24 months. After 36 months of treatment, the high-fat diet monkeys, including the HF and HF + STZ groups, had acquired increased body weights, abnormal serum lipids, and impaired glucose tolerance compared to the control group. In addition, much more marked metabolic changes were observed in the two monkeys of the HF + STZ group, particularly in terms of high-blood glucose level and insulin resistance. Morphological observation of biopsies of liver and pancreatic tissues showed decreased islet number and mass and decreased insulin staining in the monkeys of the HF + STZ group. In addition, Oil red O staining suggested remarkable accumulation of lipid droplets in the hepatocytes. Our study suggested that a long-term high-fat diet followed with a low-dose STZ was able to induce MetS in juvenile rhesus monkeys with faster pathophysiological progress compared with high-fat diet induction alone. Our primary data showed that this method may have potentials to develop MetS animal model in non-human primates.

  1. Response of Rhesus Macaques (Macaca mulatta) to the Body of a Group Member That Died from a Fatal Attack

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    Buhl, Jacqueline S.; Aure, Bonn; Ruiz-Lambides, Angelina; Gonzalez-Martinez, Janis; Platt, Michael L.; Brent, Lauren J. N.

    2013-01-01

    Among animals that form social bonds, the death of a conspecific may be a significant social event, representing the loss of an ally and resulting in disruptions to the dominance hierarchy. Despite this potential biological importance, we have only limited knowledge of animals' reactions to the death of a group member. This is particularly true of responses to dead adults, as most reports describe the responses of mothers to dead infants. Here, we describe in detail and provide video evidence of the behavioral responses of a group of free-ranging rhesus macaques (Macaca mulatta) immediately after the death of a mid-ranking adult male as a result of a fatal attack. High-ranking male members of the group, suspected to have carried out the attack, dragged and bit the dead body, exhibiting a rate of aggression 20 times greater than baseline levels. Lower-ranking individuals approached and inspected the body by looking closely, smelling, and grooming the fur. There was inconclusive evidence that these rhesus macaques found the death of a conspecific stressful: Levels of grooming between group members after the fatal attack were significantly higher than baseline levels, and higher than levels of grooming after nonfatal attacks. However, when grooming levels were adjusted based on the assumption that individuals positioned close to the body, i.e., those visible to researchers, were more likely to be engaged in grooming than those positioned farther away, this difference from baseline was no longer significant. The rate of self-directed behaviors after the fatal attack was also not different from baseline. Many of the behaviors we observed directed toward the body (aggression, inspection) have been previously reported in chimpanzees and geladas, and are similar to reactions sometimes displayed by humans. As such, this report represents a potentially valuable contribution the nascent field of nonhuman primate thanatology. PMID:23459587

  2. Comparison of Indoor Air Quality between 2 Ventilation Strategies in a Facility Housing Rhesus Macaques (Macaca mulatta).

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    Monts de Oca, Nicole A; Laughlin, Mitzi; Jenkins, John; Lockworth, Cynthia R; Bolton, Iris D; Brammer, David W

    2015-09-01

    Adequate indoor-air quality (IAQ)--defined by the temperature, relative humidity, and the levels of carbon dioxide, small particles, and total volatile organic compounds (TVOC)--is crucial in laboratory animal facilities. The ventilation standards for controlling these parameters are not well defined. This study assessed the effect of 2 ventilation strategies on IAQ in 2 rooms housing rhesus macaques (Macaca mulatta). We hypothesized that using a demand-controlled ventilation (DCV) system with a baseline ventilation rate of less than 3 fresh-air changes per hour (ACH) would maintain IAQ comparable to or better than the traditional constant flow rate (CFR) system at 12 fresh ACH. During a 60-d study period, each of the 2 rooms operated 30 d on DCV and 30 d on CFR ventilation. In both rooms, temperatures remained more consistently within the established setpoint during the DCV phase than during the CFR phase. Relative humidity did not differ significantly between rooms or strategies. CO₂ was lower during the CFR phase than DCV phase. Small-particle and TVOC levels were lower during CFR in the larger (3060 ft(3)) room but not the smaller (2340 ft(3)) room. During the DCV phase, the larger room was at the baseline airflow rate over 99% of the time and the smaller room over 96% of the time. The DCV strategy resulted in a baseline airflow rate of less than 3 ACH, which in turn provided acceptable IAQ over 96% of the time; higher ventilation rates were warranted only during sanitation periods.

  3. Ordered recall in rhesus macaques (Macaca mulatta: Can monkeys recall the correct order of sequentially presented images?

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    Heather E O'Neil

    2006-01-01

    Full Text Available Previous research has demonstrated that rhesus monkeys (Macaca mulatta are capable of identifying sequentially shown images in any order among distractors (i.e. images not part of the list sequence. We investigated ordered recall in rhesus monkeys in which subjects were expected to recognize the correct order of images during a “test” phase (simultaneous presentation of images after they had seen the images presented sequentially in a “presentation” phase (sequential presentation of images. If subjects were successfully able to execute the ordered recall task, the first trial accuracy data would appear close to 100% accuracy and it would only take one day to learn the list since the lists used were short, 3-item lists. While this study did not conclusively demonstrate monkeys are capable of ordered recall of sequentially presented, trial unique images (i.e. a list sequence presented only once per session, the data suggests that when the stimuli are not trial unique the monkeys treat each sequence as a simultaneous chaining task. A simultaneous chaining paradigm entails simultaneous presentation of all items without any previous sequential presentation of the images. It is unclear whether results resembling simultaneous chaining are seen because these animals have previous experience with simultaneous chaining, if the training procedure needs to be modified for the monkeys to understand the task, or if the task is beyond their cognitive abilities. Further research with serial learning will clarify this finding and also seek to prove whether rhesus monkeys are in fact capable of such ordered recall tasks.

  4. The sweetness-inducing effect of miraculin; behavioural and neurophysiological experiments in the rhesus monkey Macaca mulatta.

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    Brouwer, J N; Glaser, D; Hard Af Segerstad, C; Hellekant, G; Ninomiya, Y; Van der Wel, H

    1983-04-01

    1. The gustatory effects of miraculin, the sweetness-inducing protein from the miracle fruit Synsepalum dulcificum, was studied in the rhesus monkey, Macaca mulatta.2. The intake of five acids was recorded in two-bottle preference tests, one bottle containing acid and the other tap water, before and after miraculin treatment. All the acids tasted more pleasant after miraculin.3. The electrical activity of the chorda tympani nerve to stimulation of the tongue with a variety of sweeteners, acids, sodium chloride and quinine hydrochloride was recorded in anaesthetized animals.4. Pre-treatment of the tongue with 0.3-5 mg miraculin doubled the summated nerve response to the acids and diminished the response to sucrose by about 10%. The enhancement lasted for at least an hour and the diminution up to 20 min.5. After miraculin treatment the Spearman's rank correlation coefficient between the order of increased intake of acids and the order of enhancement of the summated nerve response was 0.99.6. A solution of 0.1 mg miraculin per ml. elicited a weak nerve response. No preference over water for this concentration of miraculin was recorded in the two-bottle tests.7. The activity of twenty-nine single taste fibres, selected for their responsiveness to sweetness or acids or both, was recorded after miraculin treatment. Effects were obtained in nine fibres which were similar but more pronounced than those observed in the summated recordings. Before miraculin, these fibres responded better and to a larger variety of sweeteners (81%) than the other fibres (40%). After miraculin, acids elicited on the average 2.3 times more activity than before, while the response to sweeteners was depressed. In twenty fibres no effect of miraculin was observed. These fibres responded to fewer of the sweeteners and were more stimulated by the non-sweet stimuli than the first group.8. The results suggest that miraculin acts on those structures in the taste cell membrane that are involved in

  5. Associations between Parity, Hair Hormone Profiles during Pregnancy and Lactation, and Infant Development in Rhesus Monkeys (Macaca mulatta.

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    Amanda M Dettmer

    Full Text Available Studies examining hormones throughout pregnancy and lactation in women have been limited to single, or a few repeated, short-term measures of endocrine activity. Furthermore, potential differences in chronic hormonal changes across pregnancy/lactation between first-time and experienced mothers are not well understood, especially as they relate to infant development. Hormone concentrations in hair provide long-term assessments of hormone production, and studying these measures in non-human primates allows for repeated sampling under controlled conditions that are difficult to achieve in humans. We studied hormonal profiles in the hair of 26 female rhesus monkeys (Macaca mulatta, n=12 primiparous, to determine the influences of parity on chronic levels of cortisol (hair cortisol concentration, HCC and progesterone (hair progesterone concentration, HPC during early- to mid-pregnancy (PREG1, in late pregnancy/early lactation (PREG2/LACT1, and in peak lactation (LACT2. We also assessed infants' neurobehavioral development across the first month of life. After controlling for age and stage of pregnancy at the first hair sampling period, we found that HCCs overall peaked in PREG2/LACT1 (p=0.02, but only in primiparous monkeys (p<0.001. HPCs declined across pregnancy and lactation for all monkeys (p<0.01, and primiparous monkeys had higher HPCs overall than multiparous monkeys (p=0.02. Infants of primiparous mothers had lower sensorimotor reflex scores (p=0.02 and tended to be more irritable (p=0.05 and less consolable (p=0.08 in the first month of life. Moreover, across all subjects, HCCs in PREG2/LACT1 were positively correlated with irritability (r(s=0.43, p=0.03 and negatively correlated with sensorimotor scores (r(s=-0.41, p=0.04. Together, the present results indicate that primiparity influences both chronic maternal hormonal profiles and infant development. These effects may, in part, reflect differential reproductive and maternal effort in

  6. Refining the pole-and-collar method of restraint: emphasizing the use of positive training techniques with rhesus macaques (Macaca mulatta).

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    McMillan, Jennifer L; Perlman, Jaine E; Galvan, Adriana; Wichmann, Thomas; Bloomsmith, Mollie A

    2014-01-01

    The pole-and-collar method is one of several techniques that enable the safe transfer of a nonhuman primate from its home environment into a restraint chair without the need for sedation. It has been used within the scientific community for decades. Traditional methods to train animals for pole-and-collar use rely primarily on aspects of negative reinforcement, with very little incorporation of positive-reinforcement techniques. With increasing emphasis on animal training and welfare, research facilities are incorporating positive-reinforcement training into husbandry and experimental procedures. Here we demonstrate the feasibility of training rhesus macaques (Macaca mulatta; n = 8) to cooperate for pole-and-collar transfer to a primate restraint chair. By using predominantly positive-reinforcement techniques, with supplemental elements of negative reinforcement, macaques were trained in a mean of 85 training sessions (a mean of 1085 min of training time). We also provide tools for investigators using the pole-and-collar method to help them successfully incorporate positive-reinforcement training into their procedures. This refinement has the potential to improve animal welfare and enhance the value of nonhuman primate models in research.

  7. Do you see what I see? A comparative investigation of the Delboeuf illusion in humans (Homo sapiens), rhesus monkeys (Macaca mulatta), and capuchin monkeys (Cebus apella).

    Science.gov (United States)

    Parrish, Audrey E; Brosnan, Sarah F; Beran, Michael J

    2015-10-01

    Studying visual illusions is critical to understanding typical visual perception. We investigated whether rhesus monkeys (Macaca mulatta) and capuchin monkeys (Cebus apella) perceived the Delboeuf illusion in a similar manner as human adults (Homo sapiens). To test this, in Experiment 1, we presented monkeys and humans with a relative discrimination task that required subjects to choose the larger of 2 central dots that were sometimes encircled by concentric rings. As predicted, humans demonstrated evidence of the Delboeuf illusion, overestimating central dots when small rings surrounded them and underestimating the size of central dots when large rings surrounded them. However, monkeys did not show evidence of the illusion. To rule out an alternate explanation, in Experiment 2, we presented all species with an absolute classification task that required them to classify a central dot as "small" or "large." We presented a range of ring sizes to determine whether the Delboeuf illusion would occur for any dot-to-ring ratios. Here, we found evidence of the Delboeuf illusion in all 3 species. Humans and monkeys underestimated central dot size to a progressively greater degree with progressively larger rings. The Delboeuf illusion now has been extended to include capuchin monkeys and rhesus monkeys, and through such comparative investigations we can better evaluate hypotheses regarding illusion perception among nonhuman animals.

  8. Constitutive Release of IFNγ and IL2 from Peripheral Blood Mononuclear Cells of Rhesus Macaques (Macaca mulatta) Infected with Simian T-Lymphotropic Virus Type 1

    Science.gov (United States)

    Yee, JoAnn L; Montiel, Nestor A; Ardeshr, Amir; Lerche, Nicholas W

    2013-01-01

    Simian T-cell lymphotropic viruses (STLV), the nonhuman primate counterparts of human T-cell lymphotropic viruses (HTLV), are endemic in many populations of African and Asian monkeys and apes. Although an etiologic link between STLV1 infection and lymphoproliferative disorders such as malignant lymphomas has been suggested in some nonhuman primate species, most STLV infections are inapparent, and infected animals remain clinically healthy. The retroviral transactivator, tax, is well known to increase transcription of viral and cellular genes, resulting in altered cytokine profiles. This study compared the cytokine profiles of peripheral blood mononuclear cell (PBMC) cultures from 25 STLV1-seropositive rhesus macaques (Macaca mulatta) with those of age- and sex-matched seronegative controls. IFNγ, TNFα, IL10, and IL2 levels in unstimulated PBMC culture supernatants were measured at 24, 48, and 72 h by using enzyme immunoassays. IFNγ concentrations were found significantly higher in the supernatants of PBMC cultures of seropositive monkeys as compared with seronegative controls. In addition, although IL2 concentrations were not significantly elevated in the supernatants of PBMC cultures of all seropositive monkeys as compared with all seronegative controls, IL2 levels were increased in a subset of 5 pairs. Increased constitutive cytokine release occurred in the absence of spontaneous proliferation. The increased constitutive release of IFNγ and IL2 suggests that STLV1 alters immune functions in infected but clinically healthy rhesus macaques and further characterizes STLV1 infection of rhesus macaques as a potential model for human HTLV1 infection. PMID:24326227

  9. Study of the safety, immunogenicity and efficacy of attenuated and killed Leishmania (Leishmania major vaccines in a rhesus monkey (Macaca mulatta model of the human disease

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    VF Amaral

    2002-10-01

    Full Text Available We have compared the efficacy of two Leishmania (Leishmania major vaccines, one genetically attenuated (DHFR-TS deficient organisms, the other inactivated [autoclaved promastigotes (ALM with bacillus Calmete-Guérin (BCG], in protecting rhesus macaques (Macaca mulatta against infection with virulent L. (L. major. Positive antigen-specific recall proliferative response was observed in vaccinees (79% in attenuated parasite-vaccinated monkeys, versus 75% in ALM-plus-BCG-vaccinated animals, although none of these animals exhibited either augmented in vitro gamma interferon (IFN-g production or positive delayed-type hypersensitivity (DTH response to the leishmanin skin test prior to the challenge. Following challenge, there were significant differences in blastogenic responses (p < 0.05 between attenuated-vaccinated monkeys and naïve controls. In both vaccinated groups very low levels of antibody were found before challenge, which increased after infective challenge. Protective immunity did not follow vaccination, in that monkeys exhibited skin lesion at the site of challenge in all the groups. The most striking result was the lack of pathogenicity of the attenuated parasite, which persisted in infected animals for up to three months, but were incapable of causing disease under the conditions employed. We concluded that both vaccine protocols used in this study are safe in primates, but require further improvement for vaccine application.

  10. The utility of rhesus monkey (Macaca mulatta and other non-human primate models for preclinical testing of Leishmania candidate vaccines

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    Gabriel Grimaldi Jr

    2008-11-01

    Full Text Available Leishmaniasis causes significant morbidity and mortality, constituting an important global health problem for which there are few effective drugs. Given the urgent need to identify a safe and effective Leishmania vaccine to help prevent the two million new cases of human leishmaniasis worldwide each year, all reasonable efforts to achieve this goal should be made. This includes the use of animal models that are as close to leishmanial infection in humans as is practical and feasible. Old world monkey species (macaques, baboons, mandrills etc. have the closest evolutionary relatedness to humans among the approachable animal models. The Asian rhesus macaques (Macaca mulatta are quite susceptible to leishmanial infection, develop a human-like disease, exhibit antibodies to Leishmania and parasite-specific T-cell mediated immune responses both in vivo and in vitro, and can be protected effectively by vaccination. Results from macaque vaccine studies could also prove useful in guiding the design of human vaccine trials. This review summarizes our current knowledge on this topic and proposes potential approaches that may result in the more effective use of the macaque model to maximize its potential to help the development of an effective vaccine for human leishmaniasis.

  11. Use of (18)F-fluorodeoxyglucose positron emission tomography-computed tomography to aid in diagnosing intestinal adenocarcinoma in 2 rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Caporizzo, Debra J; Kwiatkowski, Anna E; Chen, Ming-Kai; Beck, Amanda P; Booth, Carmen J; Zeiss, Caroline; Smith, Peter C; Carlson Scholz, Jodi A; Wilson, Steven R

    2014-06-01

    Two aged female rhesus macaques (Macaca mulatta) presented with weight loss and intermittent inappetence. The signalment and constellation of clinical signs led clinicians to suspect the presence of intestinal adenocarcinoma. Because of each animal's advanced age and inconclusive radiographic findings, a noninvasive diagnostic tool was preferred over exploratory laparotomy to assist in determining a diagnosis. Consequently, 2-[(18)F]fluoro-2-deoxy-d-glucose (FDG) positron emission tomography-CT (FDG-PET-CT) was chosen to aid in confirming a suspicion of gastrointestinal adenocarcinoma in both animals. FDG is a glucose analogue labeled with fluorine-18 and is taken up by highly metabolically active cells, as observed in many cancers. Tomography revealed an annular constriction of the small intestine with focal FDG uptake in one animal, and an FDG avid transmural mass in the ascending colon of the second animal. Necropsy later confirmed both sites to be adenocarcinomas. This report supports the use of FDG-PET-CT as an adjunct to conventional radiography in the diagnosis of intestinal adenocarcinoma in nonhuman primates.

  12. Necrotizing Scleritis, Conjunctivitis, and Other Pathologic Findings in the Left Eye and Brain of an Ebola Virus-Infected Rhesus Macaque (Macaca mulatta) With Apparent Recovery and a Delayed Time of Death.

    Science.gov (United States)

    Alves, Derron A; Honko, Anna N; Kortepeter, Mark G; Sun, Mei; Johnson, Joshua C; Lugo-Roman, Luis A; Hensley, Lisa E

    2016-01-01

    A 3.5-year-old adult female rhesus macaque (Macaca mulatta) manifested swelling of the left upper eyelid and conjunctiva and a decline in clinical condition 18 days following intramuscular challenge with Ebola virus (EBOV; Kikwit-1995), after apparent clinical recovery. Histologic lesions with strong EBOV antigen staining were noted in the left eye (scleritis, conjunctivitis, and peri-optic neuritis), brain (choriomeningoencephalitis), stomach, proximal duodenum, and pancreas. Spleen, liver, and adrenal glands, common targets for acute infection, appeared histologically normal with no evidence of EBOV immunoreactivity. These findings may provide important insight for understanding sequelae seen in West African survivors of Ebola virus disease.

  13. Behavioral inhibition in rhesus monkeys (Macaca mulatta is related to the airways response, but not immune measures, commonly associated with asthma.

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    Katie Chun

    Full Text Available Behavioral inhibition reflects a disposition to react warily to novel situations, and has been associated with atopic diseases such as asthma. Retrospective work established the relationship between behavioral inhibition in rhesus monkeys (Macaca mulatta and airway hyperresponsiveness, but not atopy, and the suggestion was made that behavioral inhibition might index components of asthma that are not immune-related. In the present study, we prospectively examined the relationship between behavioral inhibition and airway hyperresponsiveness, and whether hormonal and immune measures often associated with asthma were associated with behavioral inhibition and/or airway hyperresponsiveness. In a sample of 49 yearling rhesus monkeys (mean=1.25 years, n=24 behaviorally inhibited animals, we measured in vitro cytokine levels (IL-4, IL-10, IL-12, IFN-γ in response to stimulation, as well as peripheral blood cell percentages, cortisol levels, and percentage of regulatory T-cells (CD3+CD4+CD25+FOXP3+. Airway reactivity was assessed using an inhaled methacholine challenge. Bronchoalveolar lavage was performed and the proportion of immune cells was determined. Behaviorally inhibited monkeys had airway hyperresponsiveness as indicated by the methacholine challenge (p=0.031, confirming our earlier retrospective result. Airway hyperresponsiveness was also associated with lower lymphocyte percentages in lavage fluid and marginally lower plasma cortisol concentrations. However, none of the tested measures was significantly related to both behavioral inhibition and airway hyperresponsiveness, and so could not mediate their relationship. Airway hyperresponsiveness is common to atopic and non-atopic asthma and behavioral inhibition has been related to altered autonomic activity in other studies. Our results suggest that behavioral inhibition might index an autonomically mediated reactive airway phenotype, and that a variety of stimuli (including inflammation within

  14. Study on the Dermatoglyphics of Taihang Macaca Mulatta*Ⅲ Palmar Patterns%太行猕猴掌面花纹研究*Ⅲ

    Institute of Scientific and Technical Information of China (English)

    卢芹; 赵晓进; 宛霞; 张红绪

    2001-01-01

    Epidermal patterns of palms of 32 Taihang Macaca Mulatta (16males and 16 females)were examined. We found that there were six kinds of pattern types in different areas. Refer to the dermatoglyph i- cs' opening direction and rotating direction, loops were mainly radialward while whorls ulnarward;On interdigital I,palmar patterns indicated their pecularity and complexity in percentile frequencies,print pattern and sexual difference;clustering the true pattern percentile frequencies of the five species of primates, the result conveyed that the print patterns and percentile frequencies were different in primates' different classification, it's one of the criterions to judge the morphological characteristics among different species.%本文对32只太行猕猴的掌面花纹进行观察。结果表明:有6种花纹分布在掌面的不同区域;纹路的开口方向和旋转方向,箕形纹以桡侧、斗形纹以尺侧居多;指间Ⅰ区花纹在花纹类型、分布频率和性别差异等方面表现出一定的特异性和复杂性;通过对5种非人灵长类定型花纹分布频率聚类,结果提示,肤纹类型和分布频率在灵长类不同分类阶元中有一定差异,是判别种间形态特征的依据之一。

  15. The Macaque Social Responsiveness Scale (mSRS: A Rapid Screening Tool for Assessing Variability in the Social Responsiveness of Rhesus Monkeys (Macaca mulatta.

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    Eric J Feczko

    Full Text Available Understanding the biological mechanisms underlying human neuropsychiatric disorders, such as autism spectrum disorder (ASD, has been hindered by the lack of a robust, translational animal model. Rhesus monkeys (Macaca mulatta display many of the same social behaviors that are affected in ASD, making them an excellent animal species in which to model social impairments. However, the social impairments associated with ASD may reflect extreme ends of a continuous distribution of traits. Thus, to validate the rhesus monkey as an animal model for studying social impairments that has strong translational relevance for ASD, researchers need an easily-implemented measurement tool that can quantify variation in social behavior dimensionally. The Social Responsiveness Scale (SRS is a 65-item survey that identifies both typical and atypical social behaviors in humans that covary with ASD symptom severity. A chimpanzee SRS has already been validated and the current study adapted this tool for use in the rhesus monkey (mSRS. Fifteen raters completed the mSRS for 105 rhesus monkeys living at the Yerkes National Primate Research Center. The mSRS scores showed a unimodal distribution with a positive skew that identified 6 statistical outliers. Inter-rater reliability was very strong, but only 17 of the 36 questions showed positive intra-item reliability. The results of an exploratory factor analysis identified 3 factors that explained over 60% of the variance, with 12 items significantly loading onto the primary factor. These items reflected behaviors associated with social avoidance, social anxiety or inflexibility and social confidence. These initial findings are encouraging and suggest that variability in the social responsiveness of rhesus monkeys can be quantified using the mSRS: a tool that has strong translational relevance for human disorders. With further modification, the mSRS may provide an promising new direction for research on the biological

  16. Occurrence of Giardia, Cryptosporidium, and Entamoeba in wild rhesus macaques (Macaca mulatta living in urban and semi-rural North-West India

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    John J. Debenham

    2017-04-01

    Full Text Available Giardia duodenalis, Cryptosporidium spp., and Entamoeba spp. are intestinal protozoa capable of infecting a range of host species, and are important causes of human morbidity and mortality. Understanding their epidemiology is important, both for public health and for the health of the animals they infect. This study investigated the occurrence of these protozoans in rhesus macaques (Macaca mulatta in India, with the aim of providing preliminary information on the potential for transmission of these pathogens between macaques and humans. Faecal samples (n = 170 were collected from rhesus macaques from four districts of North-West India. Samples were analysed for Giardia/Cryptosporidium using a commercially available direct immunofluorescent antibody test after purification via immunomagnetic separation. Positive samples were characterised by sequencing of PCR products. Occurrence of Entamoeba was investigated first by using a genus-specific PCR, and positive samples further investigated via species-specific PCRs for Entamoeba coli, Entamoeba histolytica, Entamoeba dispar and Entamoeba moshkovskii. Giardia cysts were found in 31% of macaque samples, with all isolates belonging to Assemblage B. Cryptosporidium oocysts were found in 1 sample, however this sample did not result in amplification by PCR. Entamoeba spp. were found in 79% of samples, 49% of which were positive for E. coli. Multiplex PCR for E. histolytica, E. dispar and E. moshkovskii, did not result in amplification in any of the samples. Thus in 51% of the samples positive at the genus specific PCR, the Entamoeba species was not identified. This study provides baseline information on the potential for transmission of these zoonotic parasites at the wildlife-human interface.

  17. Histopathological changes of Macaca mulatta infected with Plasmodium knowlesi%恒河猴感染诺氏疟原虫的病理组织学变化

    Institute of Scientific and Technical Information of China (English)

    陈林; 李国桥; 户耀增; 罗灼玲

    2001-01-01

    目的探讨诺氏疟原虫(Plasmodium knowlesi)感染恒河猴(Macaca mu1atta)引起有关脏器的病理组织学变 化。 方法病解3例感染疟原虫未经治疗病死的猴;2例感染疟原虫经青蒿琥酯(artesunate)栓剂治疗后又复发 的猴;1例感染疟原虫经磷酸哌喹(piperaquine phosphate)治愈后死于上肢坏死感染的猴。对有关脏器均进 行切片检查。 结果 3例(1号、7号和12号)未经治疗而病死的猴和1例(72号)虽经青蒿琥酯栓剂治疗但很快被排出 体外的猴的心、肝、脾、肺、肾、大小脑、胰腺、甲状旁腺、脑垂体和淋巴结等均有严重病变,含原虫的红细胞 和疟色素聚集于这些脏器的毛细血管内。1例(131号)经用哌喹治愈而死于上肢坏死的猴,除见多个脏器 内有色素沉积或被巨噬细胞吞噬外,可见胰岛细胞、甲状旁腺和垂体细胞萎缩和消失等病变。1例(33号) 用青蒿琥酯栓剂治疗后短期原虫转阴,但又复燃的猴被灌药致死,多个脏器所见与感染后未经治疗者明显 不同,仅见肝脏Kupffer细胞和大脑基质细胞内含原虫和疟色素,多个脏器均呈修复。 结论本文报导了诺氏疟原虫感染恒河猴后各有关脏器的病理组织学变化,特别是观察到胰岛细胞、甲状 旁腺和垂体细胞的萎缩和消失与心肌细胞的溶解是国内外文献所未记载过的。%Objective To study the histopathological changes of relevant intemal organs of Macaca mulatta infected with Plasmodium knowlesi ( P. knowlesi). Methods Histopathological examination of 3 monkeys who died of P. knowlesi infection, 2 P. knowlesi infected monkeys who died of treatment failure with artesunate suppository and 1 P. knowlesi infected monkey that was cured by piperaquine phosphate (PQP) but died of trauma and necrosis of the fore limb. Results The heart, liver, spleen, lung, kidney, brain, pancreas, parathyriod, pituitary and lymph nodes showed severe

  18. Alterations in the endometrium of rats, rabbits, and Macaca mulatta that received an implantation of copper/low-density polyethylene nanocomposite

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    Hu LX

    2014-02-01

    Full Text Available Li-Xia Hu,1,* Hong Wang,1,* Meng Rao,1,* Xiao-Ling Zhao,1 Jing Yang,1 Shi-Fu Hu,1 Jing He,1,2 Wei Xia,1 Hefang Liu,1 Bo Zhen,1 Haihong Di,1 Changsheng Xie,3 Xianping Xia,3 Changhong Zhu,11Family Planning Research Institute, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, People's Republic of China; 2Central Hospital of Wuhan, Wuhan, People's Republic of China; 3Department of Materials Science and Engineering, Huazhong University of Science and Technology, Wuhan, People's Republic of China *These authors contributed equally to this work Abstract: A copper/low-density polyethylene nanocomposite (nano-Cu/LDPE, a potential intrauterine device component material, has been developed from our research. A logical extension of our previous work, this study was conducted to investigate the expression of plasminogen activator inhibitor 1 (PAI-1, substance P (SP, and substance P receptor (SP-R in the endometrium of Sprague Dawley rats, New Zealand White rabbits, and Macaca mulatta implanted with nano-Cu/LDPE composite. The influence of the nano-Cu/LDPE composite on the morphology of the endometrium was also investigated. Animals were randomly divided into five groups: the sham-operated control group (SO group, bulk copper group (Cu group, LDPE group, and nano-Cu/LDPE groups I and II. An expression of PAI-1, SP, and SP-R in the endometrial tissues was examined by immunohistochemistry at day 30, 60, 90, and 180 postimplantation. The significant difference for PAI-1, SP, and SP-R between the nano-Cu/LDPE groups and the SO group (P<0.05 was identified when the observation period was terminated, and the changes of nano-Cu/LDPE on these parameters were less remarkable than those of the Cu group (P<0.05. The damage to the endometrial morphology caused by the nano-Cu/LDPE composite was much less than that caused by bulk copper. The nano-Cu/LDPE composite might be a potential substitute for conventional materials for intrauterine

  19. Hallazgos de anticuerpos contra Leptospira sp., serovariedades Panama, Lai, Australis, Shermani y Patoc, en un grupo de monos rhesus (Macaca mulatta en condiciones de cautiverio Antibodies findings against Leptospira sp., of the serovars Panama, Lai, Australis, Shermani, and Patoc, in a group of rhesus monkeys (Macaca mulatta in conditions of captivity

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    A Ibáñez-Contreras

    2010-01-01

    Full Text Available La leptospirosis ha emergido como una importante enfermedad infecciosa, lo que ha ocurrido en diferentes entornos desde urbanos hasta medios naturales; los portadores son animales salvajes o domésticos. El objetivo fue evaluar la presencia de anticuerpos contra Leptospira en monos rhesus en condiciones de bioterio. Se utilizaron 59 monos de diferentes etapas fisiológicas. Se determinaron anticuerpos contra Leptospira a partir de la prueba de aglutinación microscópica (TAM, utilizando como antígenos 25 serovariedades de Leptospira. Se observó que de los 59 animales, únicamente el 30,50% reaccionaron contra una o más serovariedades de Leptospira. En este trabajo se determinaron anticuerpos contra cuatro serovariedades de Leptospira: Panama, Lai, Australis y Shermani, consideradas como patógenas, y once de las muestras reaccionaron contra la serovariedad Patoc, considerada no patógena y saprófita. Ninguno de los animales que resultaron positivos contra Leptospira presentó signos clínicos compatibles con leptospirosis.During the last decade leptospirosis has emerged as a worldwide and very important infectious disease, affecting different environments from urban to rural, with carriers usually being wild or domestic animals. The objective of this study was to evaluate the presence of antibodies against Leptospira in rhesus monkeys (Macaca mulatta in a Research Center. Fifty nine non-human primates of different physiological stages were studied. The animals were held in groups and in individual cages. Blood samples were obtained from the saphenous vein to determine the presence of antibodies through the microscopic agglutination test (MA, using twenty five serovars of Leptospira as antigens. It was observed that 18 out of the 59 monkeys (30.50% reacted against one or more serovars of Leptospira. In this study, antibodies of 4 serovars of Leptospira, (Panama, Lai, Australis, and Shermani were detected. All 4 serovars were considered

  20. 圈养川金丝猴、猕猴肠道寄生虫感染及其形态观察%The Intestinal Parasitic Infection and Its Morphology of Rhinopithecus roxellanaes and Macaca mulatta

    Institute of Scientific and Technical Information of China (English)

    吕向辉; 陈旭旭; 袁美群; 蔡伟霞; 乔继英; 吴晓民

    2010-01-01

    2007年11~12月对陕西省珍稀野生动物抢救饲养中心的川金丝猴(R.roxellanae)、猕猴(Macaca mulatta)进行了肠道寄生虫感染情况及其种类形态的研究.采用生理盐水涂片、碘液染色、铁苏木素染色法对川金丝猴、猕猴进行粪便检查,并对检出的寄生虫进行数码显微摄像.结果川金丝猴、猕猴肠道寄生虫的感染率分别为91.67%、100%,共检出7种肠道寄生虫,其中以鞭虫(Capillaria sp.)、芽囊原虫(Blastocystis sp.)、溶组织内阿米巴(Entamoeba histolytica)感染较为严重.

  1. 太行山猕猴掌面肤纹三角分布%Distribution of the triradius on the palms in Taihang Macaca mulatta

    Institute of Scientific and Technical Information of China (English)

    赵晓进; 范红军; 靳想

    2012-01-01

    Objective:To report the characteristic of the triradius on the palms in the Taihang Macaca mulatto.. Methods: The sample comprised 31 individuals (8 males and 23 females) whose dermatoglyphics were completed and clear. The triradii on palms were taken with a digital camera or direct observation. Results : There constantly existed ten triradii on the palms in Macaca mulatto , and the average number of the triradius was 9. 1, and they ranged from 8 to 11. Conclusion: There is a significant difference in the position of palmar triradii between Macaca mulatto and other primates. Sex difference and bi-manual difference were not significant. The difference is mainly due to the evolution degree of primates, the development of palmar pad, the dermatoglyphic patterns and the printing procedure.%目的:了解太行山猕猴掌面三角的分布特征.方法:直接观察太行山猕猴掌面肤纹标本31例.结果:太行山猕猴掌面三角常出现的三角有10个,三角数目在8~11个之间,平均9.1个.结论:太行山猕猴掌面三角分布模式与其他灵长类掌面三角相比有差异.掌面三角性差和侧差无差异.造成这些差异的主要原因与灵长类动物进化程度、掌垫发育、花纹类型以及观察方法有关.

  2. Effects of Simian Betaretrovirus Serotype 1 (SRV1) Infection on the Differentiation of Hematopoietic Progenitor Cells (CD34+) Derived from Bone Marrow of Rhesus Macaques (Macaca mulatta)

    Science.gov (United States)

    Montiel, Nestor A; Todd, Patricia A; Yee, JoAnn; Lerche, Nicholas W

    2012-01-01

    Peripheral blood cytopenias, particularly persistent anemia and neutropenia, are commonly associated with simian betaretrovirus infection of Asian monkeys of the genus Macaca. The pathogenetic mechanisms underlying these hematologic abnormalities are not well understood. The current study investigated the in vitro tropism of simian betaretrovirus (SRV) for both hematopoietic progenitor (CD34+) and stromal cells obtained from rhesus macaque bone marrow and assessed the effects of infection on hematopoietic progenitor cell differentiation in vitro. After in vitro exposure, SRV proviral DNA could be demonstrated by real-time PCR in cells and the reverse transcriptase assay in supernatants from SRV-exposed progenitor-associated stroma, but not in differentiated colonies derived from SRV-exposed progenitors. Furthermore, in vitro exposure involving cell–cell contact of uninfected CD34+ progenitor cells with SRV-infected stromal cells resulted in a statistically significant reduction in granulocyte–macrophage colony formation in absence of detectable SRV-infection of progenitor cells. Reduction in colony formation occurred in a ‘dose-dependent’ fashion with increasing contact time. No effects on erythroid lineages and RBC differentiation were noted. Our results suggest that hematologic abnormalities observed during SRV disease (natural or experimental) of rhesus macaques may not result from direct effects of viral infection of progenitor cell populations, but rather be (at least in part) a consequence of SRV infection of supportive bone marrow stroma with secondary effects on differentiation of associated progenitor cells. PMID:22330653

  3. A Practical Approach for Designing Breeding Groups to Maximize Genetic Diversity in a Large Colony of Captive Rhesus Macaques (Macaca mulatta).

    Science.gov (United States)

    Vinson, Amanda; Raboin, Michael J

    2015-11-01

    Limited guidance is available on practical approaches for maintaining genetic diversity in large NHP colonies that support biomedical research, despite the fact that reduced diversity in these colonies is likely to compromise the application of findings in NHP to human disease. In particular, constraints related to simultaneously housing, breeding, and providing ongoing veterinary care for thousands of animals with a highly complex social structure creates unique challenges for genetic management in these colonies. Because the composition of new breeding groups is a critical component of genetic management, here we outline a 3-stage protocol for forming new breeding groups of NHP that is aimed at maximizing genetic diversity in the face of frequent restrictions on age, sex, and numbers of animals per breeding group. As an example application of this protocol, we describe optimal combinations of rhesus macaques from an analysis of candidate animals available for breeding in July 2013, selected from among the approximately 4000 macaques maintained at the Oregon National Primate Research Center. In addition, a simulation study to explore the genetic diversity in breeding groups formed by using this protocol, indicated an approximate 10-fold higher genome uniqueness, 50% lower mean kinship, and an 84-fold lower mean inbreeding coefficient among potential offspring within groups, when compared with a suboptimal group design. We conclude that this protocol provides a practical and effective approach to breeding group design for colony managers who want to prevent the loss of genetic diversity in large, semiisolated NHP colonies.

  4. 利用 TALEN 技术建立恒河猴 TRIM5α基因 突变细胞株%Establishment of Mutagenesis Cell Line of Macaca mulatta Gene TRIM5α by TALEN

    Institute of Scientific and Technical Information of China (English)

    王小莉; 余庆; 袁雅红; 腾智平; 李东升; 曾毅

    2016-01-01

    利用 TALEN 技术建立恒河猴 TRIM5α基因突变细胞株,为进一步研究 TRIM5α基因的功能奠定基础。构建针对TRIM5α打靶基因的 TALEN,通过点突变的方法获得包含 TRIM5α第7个外显子中打靶位点1211-1224的基因序列并构建点突变donor 载体。将打靶 TRIM5α基因的 TALEN 质粒和 donor 质粒电转入恒河猴肾细胞(LLC-MK2)中,无限稀释法获得单克隆细胞系,通过抽提基因组 DNA,再利用 PCR 技术扩增目标序列并测序筛选出 TRIM5α碱基缺失(1215-1216)和点突变(1213-1215,1217)的细胞系。通过共转 TALEN 质粒和点突变的 donor 质粒筛选获得了 TRIM5α基因敲除和 TRIM5α基因点突变的 LLC-MK2细胞系。%Using transcription activator-like effector nuclease(TALEN)to establish the mutagenesis cell line of Macaca mulatta gene TRIM5α is to lay the foundation for further studying the function of TRIM5α gene. The TALEN plasmids targeting TRIM5α was constructed. The site-directed gene mutagenesis donor vector was obtained by site-directed gene mutagenesis technology and the sequence contained the seventh exon of TRIM5α at the position from 1 211 to 1 224. The TALEN plasmids and donor vector were co-transfected into the M. mulatta’s kidney cell line(LLC-MK2)by electroporation. The single cell line was obtained by the infinite dilution method. By extracting the genomic DNA and amplifying the target sequence by PCR,the cell line with base deletion(1 215-1 216)and site mutations(1 213-1 215,1 217)of TRIM5α was screened. Conclusively,the LLC-MK2 single cell line with knockout and site-directed gene mutagenesis of gene TRIM5α was obtained.

  5. 基于PAE编码系统的太行山猕猴行为谱%PAE coding system-based ethogram of Taihangshan macaque (Macaca mulatta tcheliensis ), Jiyuan, Henan Province, China

    Institute of Scientific and Technical Information of China (English)

    田军东; 王振龙; 路纪琪; 郭相保; 刘金栋

    2011-01-01

    2009年2月至2010年3月,在河南太行山猕猴国家级自然保护区济源管理局愚公管理分局所辖的天坛山管护区,利用焦点动物取样法,观察并记录了野生太行山猕猴行为的发生过程、内容和环境.基于以"姿势-动作-环境"(Posture-act-environment,PAE)为轴心、以行为生态功能为依据的PAE编码系统,对野生太行山猕猴的行为进行分类和系统编码并构建PAE行为谱.结果:1)研究中分辨并记录到猕猴的14种姿势,93种动作,121种行为;2)将所记录到的行为分别划归于摄食、排遗、调温、配对、交配、育幼、竞争、亲密、聚群、通讯、休息、运动和其他等13个类别中;3)得到了基于PAE编码系统的野生太行山猕猴行为谱.%From February 2009 to March 2010, by using focal animal sampling method, we recorded the processes, contents, and surrounding habitat of behaviors of free - ranging Taihangshan macaques ( Macaca mulatta tcheliensis ) in Henan Taihangshan Macaque National Nature Reserve ( HTMNNR ).We collected behavioral data and coded them following the " posture-act-environment" ( PAE ) coding system which concerns posture, act, environment, and ecological function of behaviors.The results showed that: 1 ) a total of 14 postures, 93 acts and 121 behaviors of Taihangshan macaques were recorded and identified; 2) based on ecological function of behaviors, all of the recorded behaviors were categoried into 13 groups including foraging, eliminate, thermo-regulatory, paring, mating, parental, agonistic, affiliative, aggregation, communication, resting, locomotive, and miscellaneous behaviors; and 3 ) PAE ethogram of free-ranging Taihangshan macaques was successfully established following the PAE coding system.

  6. 基于分块主成分分析的太行山猕猴面部相似性%Facial similarity in Taihangshan macaques (Macaca mulatta tcheliensis)based on modular principal components analysis

    Institute of Scientific and Technical Information of China (English)

    王白石; 王振龙; 鹿鹤; 李利; 路纪琪

    2013-01-01

    From April to August in 2012,a target troop (named as WW-1) of Taihangshan macaques (Macaca mulatta tcheliensis) was investigated for facial similarity in the Tiantanshan area (35°05′-35°15′ N,112°12′-112°22′ E) of the Taihangshan Macaque National Nature Reserve (TMNNR) in Jiyuan,China.Facial close-up photos of 26 individuals over 3-years-old belonging to 3 matrilineal units within troop Wangwu-1 (WW-1) were photographed and facial similarity values between every two different individuals were analyzed using modular principal component analysis (MPCA) method.We aimed to find the correlation between facial similarity and individual kinship.The results showed that:(1) facial similarity was significantly associated with kinship between individuals; the facial similarity between mothers and offspring (0.93 ±0.00) was significantly higher than those of the intra-unit group (0.89 ±0.00) and the inter-unit group (0.84 ± 0.01) ; the similarity value of the intra-unit group is significantly higher than the inter-unit group; and (2) individual face features varied with increasing age in Taihangshan macaques; higher facial similarity was found between≥4 year old individuals and their mothers (0.88-0.95),and mother-offspring relationship could be assuredly recognized via this value.The results from this study may provide reasonable and effective methods for individual identification in nonhuman primates.%2012年4~8月,在太行山猕猴国家级自然保护区济源管理局天坛山管护区(北纬35°05′~ 35°15′,东经112°12′~112°22′),对太行山猕猴王屋1群(WW-1)内的3个母系单元(matrilineal unit)中大于(等于)3岁龄的26只个体进行面部拍照,获取其面部特写照片,进而利用分块主成分分析(modular principal component analysis,MPCA)法,对个体进行面部识别分析,旨在探讨个体间面部相似度与亲缘关系的相关性.结果表明:(1)太行山猕猴个体间的面部相似度与亲

  7. Investigation on Gastrointestinal Parasites in Captive-bred Macaca mulatta and Macaca fascicularis in Guangxi%广西地区人工驯繁猕猴、食蟹猴胃肠道寄生虫感染情况的初步调查

    Institute of Scientific and Technical Information of China (English)

    李健; 全琛宇; 施维; 周庆安; 张鸿满; 黄维义; 何国声

    2013-01-01

    Objective To understand the infection status of gastrointestinal parasites in captive-bred non-human primates (Macaca mulatta and Macaca fascicularis) in Guangxi,and provide basis for prevention and control strategies.Methods The monkeys were divided into three groups,the growth group,the breeding group,and the quarantine group.Totally 784 fresh feces samples from M.mulatta and M.fascicularis were collected at six monkey shelters in Guangxi,during 2008~2012.The direct smear method (DS),saturation salt solution float method (SSF) and formaldehyde-ether precipitation method (FEP) were used for fecal parasite examination under the microscope.Results The total infection rate was 72.4% among 784 sample.Five protozoan species Ameoba,Trichomonas sp.,Giardia sp.,Balantidium coli and Coccidia),five species of nematodes(Trichuris sp.,Streptopharagus sp.,Physaloptera sp.,Oesophagostmum sp.and Strongyloides sp.),two species of cestodas (Hymenolepis sp.and Bertiella studeri),one speice of trematoda and one speice of arthropod were identified.The gastrointestinal parasites infection of the growth group was possessed of the fewest among three groups,while the quarantine group was the largest.Relatively higher prevalence of protozoan was observed in both the growth monkey group and the breeding group,and the highest infection rate was found in both Amoeba and B.coli.Conclusions The results suggest that the protozoans with simple lifecycle and the soil transmitted nematodes which are difficult to kill by antihelmintic products nowadays,have become the major parasitic species that does serious harm to the captive-bred monkeys for experiment used in Guangxi.Herein,the infestation status could provide reference for prevention and controling strategies on parasitic disease of monkeys.Some species identified from this study have been considered as the pathogens of zoonose,which will have important public sanitation significances of countermeasure on disease spread between humans and

  8. Vicarious reinforcement in rhesus macaques (macaca mulatta).

    Science.gov (United States)

    Chang, Steve W C; Winecoff, Amy A; Platt, Michael L

    2011-01-01

    What happens to others profoundly influences our own behavior. Such other-regarding outcomes can drive observational learning, as well as motivate cooperation, charity, empathy, and even spite. Vicarious reinforcement may serve as one of the critical mechanisms mediating the influence of other-regarding outcomes on behavior and decision-making in groups. Here we show that rhesus macaques spontaneously derive vicarious reinforcement from observing rewards given to another monkey, and that this reinforcement can motivate them to subsequently deliver or withhold rewards from the other animal. We exploited Pavlovian and instrumental conditioning to associate rewards to self (M1) and/or rewards to another monkey (M2) with visual cues. M1s made more errors in the instrumental trials when cues predicted reward to M2 compared to when cues predicted reward to M1, but made even more errors when cues predicted reward to no one. In subsequent preference tests between pairs of conditioned cues, M1s preferred cues paired with reward to M2 over cues paired with reward to no one. By contrast, M1s preferred cues paired with reward to self over cues paired with reward to both monkeys simultaneously. Rates of attention to M2 strongly predicted the strength and valence of vicarious reinforcement. These patterns of behavior, which were absent in non-social control trials, are consistent with vicarious reinforcement based upon sensitivity to observed, or counterfactual, outcomes with respect to another individual. Vicarious reward may play a critical role in shaping cooperation and competition, as well as motivating observational learning and group coordination in rhesus macaques, much as it does in humans. We propose that vicarious reinforcement signals mediate these behaviors via homologous neural circuits involved in reinforcement learning and decision-making.

  9. Vicarious Reinforcement In Rhesus Macaques (Macaca mulatta

    Directory of Open Access Journals (Sweden)

    Steve W. C. Chang

    2011-03-01

    Full Text Available What happens to others profoundly influences our own behavior. Such other-regarding outcomes can drive observational learning, as well as motivate cooperation, charity, empathy, and even spite. Vicarious reinforcement may serve as one of the critical mechanisms mediating the influence of other-regarding outcomes on behavior and decision-making in groups. Here we show that rhesus macaques spontaneously derive vicarious reinforcement from observing rewards given to another monkey, and that this reinforcement can motivate them to subsequently deliver or withhold rewards from the other animal. We exploited Pavlovian and instrumental conditioning to associate rewards to self (M1 and/or rewards to another monkey (M2 with visual cues. M1s made more errors in the instrumental trials when cues predicted reward to M2 compared to when cues predicted reward to M1, but made even more errors when cues predicted reward to no one. In subsequent preference tests between pairs of conditioned cues, M1s preferred cues paired with reward to M2 over cues paired with reward to no one. By contrast, M1s preferred cues paired with reward to self over cues paired with reward to both monkeys simultaneously. Rates of attention to M2 strongly predicted the strength and valence of vicarious reinforcement. These patterns of behavior, which were absent in nonsocial control trials, are consistent with vicarious reinforcement based upon sensitivity to observed, or counterfactual, outcomes with respect to another individual. Vicarious reward may play a critical role in shaping cooperation and competition, as well as motivating observational learning and group coordination in rhesus macaques, much as it does in humans. We propose that vicarious reinforcement signals mediate these behaviors via homologous neural circuits involved in reinforcement learning and decision-making.

  10. Vicarious Reinforcement In Rhesus Macaques (Macaca mulatta)

    OpenAIRE

    Chang, Steve W. C.; Amy A. Winecoff; Platt, Michael L.

    2011-01-01

    What happens to others profoundly influences our own behavior. Such other-regarding outcomes can drive observational learning, as well as motivate cooperation, charity, empathy, and even spite. Vicarious reinforcement may serve as one of the critical mechanisms mediating the influence of other-regarding outcomes on behavior and decision-making in groups. Here we show that rhesus macaques spontaneously derive vicarious reinforcement from observing rewards given to another monkey, and that t...

  11. Vicarious Reinforcement in Rhesus Macaques (Macaca Mulatta)

    OpenAIRE

    Chang, Steve W. C.; Amy A. Winecoff; Platt, Michael L.

    2011-01-01

    What happens to others profoundly influences our own behavior. Such other-regarding outcomes can drive observational learning, as well as motivate cooperation, charity, empathy, and even spite. Vicarious reinforcement may serve as one of the critical mechanisms mediating the influence of other-regarding outcomes on behavior and decision-making in groups. Here we show that rhesus macaques spontaneously derive vicarious reinforcement from observing rewards given to another monkey, and that this...

  12. Expression of cannabinoid and opioid receptors in nervous as well as immune systems of Macaca mulatta and Tupaia belangeri%正常猕猴与树鼩神经系统和免疫系统组织中大麻素与阿片受体的表达

    Institute of Scientific and Technical Information of China (English)

    张庆余; 范晓娜; 曹毅

    2011-01-01

    为应用猕猴和树鼩动物模型研究毒品成瘾对神经/免疫系统的影响提供基础数据,对大麻素及阿片受体在正常猕猴和树鼩神经系统和免疫系统的表达进行初步确定.采集正常猕猴和树鼩新鲜组织(皮质、小脑、脑干、海马、脊髓、脾脏),应用半定量逆转录PCR和实时定量PCR的方法检测大麻素与阿片受体mRNA在猕猴和树鼩各组织中的表达情况.猕猴脑部各区包括脾脏均表达大麻索受体1(CNR1),而大麻素受体2(CNR2)只表达于脾脏内.三类阿片受体中,mu(μ)受体表达最为广泛,在以上各组织中均有表达;delta(δ)受体表达的组织最少,只在海马表达;kappa(κ)受体表达介于两者之间,分别在皮质、小脑、脑干、脊髓中表达.在树鼩组织中,CNR1和CNR2表达于整个大脑重要脑区中,且CNR1表达量高于同一区域内CNR2表达的鼍:脾脏中CNR2的表达较高,而CNR1不表达.三类阿片受体只有检测到μ受体在脑部与脾脏表达,且在各个脑区的表达量明显高于脾脏的表达量;δ体和κ受体在被检各个组织中均无表达.总体而言,两种大麻素受体在猕猴和树鼩体内表达情况与人类和鼠的情况类似,而三类阿片受体在猕猴体内表达情况与人类吏为接近.猕猴和树鼩可能可用于人类毒品成瘾的研究;猕猴在某些神经受体的表达更接近人类,其在研究毒品成瘾的机理和对免疫系统的影响方面仍有不可替代的地位.%To make Macaca mulatta and Tupaia belangeri as experimental animals for studying functions of opioid and cannabinoid receptors in drug addiction, we examined expression of the opioid and cannabinoid receptors in nervous and immune system of the two animals. We dissected normal adult M. mulatta and T. belangeri, collected tissues of cortex, cerebellum, brain stem, hippocampus, spinal cord, and spleen, and then applied the semi-quantitative PCR and real-time quantitative PCR methods to

  13. Genes ynthesis, prokaryotic expression and purification of Macaca mulatta granulocytemacrophage colony stimulating factor%恒河猴粒细胞-巨噬细胞集落刺激因子的基因合成、原核表达及纯化

    Institute of Scientific and Technical Information of China (English)

    刘娟; 李鼎锋; 陈丹; 李璐; 刘新颖; 王冉; 史洪娜; 王维龙; 沈林; 刘勇

    2012-01-01

    目的 人工合成恒河猴粒细胞-巨噬细胞集落刺激因子(Macaca mulatta granulocyte-macrophage colony stimulating factor,mGM-CSF)基因,在大肠杆菌中高效表达并纯化.方法 根据大肠杆菌遗传密码子偏爱性优化设计并合成mGM-CSF基因,克隆至原核表达载体pET-43.1a(+)中,构建重组表达质粒pET-43.1a-mGM-CSF,转化大肠杆菌BL21-CodonPlus( DE3)-RIPL,IPTG诱导表达.表达的重组mGM-CSF蛋白经Sephacryl S-200分子筛层析纯化,复性后,Western blot检测其反应原性,MTT法检测其生物学活性.结果 重组表达质粒pET-43.1a-mGM-CSF经双酶切及测序证实构建正确;表达的重组蛋白相对分子质量约为15000,表达量约占菌体总蛋白的30%,主要以包涵体形式存在;纯化复性后的重组蛋白纯度可达95%以上,并可与大鼠抗人GM-CSF单克隆抗体特异性结合,比活性为1.2×107 IU/mg.结论 在大肠杆菌中高效表达了重组mGM-CSF蛋白,纯化复性后的蛋白具有良好的生物学活性.%Objective To synthesize Macaca mulatto granulocyte-macrophage colony stimulating factor (mGM-CSF) gene, highly express in E. Coli and purify the expressed product. Methods According to the E. Co/I-preferred codon, mGM-CSF gene was designed and synthesized, and cloned into prokaryotic expression vector pET-43. La ( + ). The constructed recombinant plasmid pET-43. La-mGM-CSF was transformed to E. Coli BL21-CodonPlus (DE3)-RIPL and induced with IPTG. The expressed recombinant mGM-CSF was purified by Sephacryl S-200 molecular sieve chromatography, re-naturalized, then determined for reactogenicity by Western blot, and for biological activity by MTT method. Results Both restriction analysis and sequencing proved that recombinant plasmid pET-43. La-mGM-CSF was constructed correctly. The expressed recombinant protein, with a relative molecular mass of about IS 000, contained about 30% of total somatic protein and mainly existed in a form of inclusion body. The protein

  14. 白马雪山自然保护区猕猴冬季栖息地的选择%Winter Habitat Selection by Macaca mulatta in Baimaxueshan National Nature Reserve,China

    Institute of Scientific and Technical Information of China (English)

    黎大勇; 胡杰; 任宝平; 沈永生; 周岐海

    2012-01-01

    x Winter habitat selection of one group of Macaca mulatto was investigated from November,2009 to February,2010 in Gehuaqing region in Baimaxueshan National Nature Reserve,Yunnan province,China. Fourteen ecological factors were measured in 60 plots (20 m× 20 m) where the study group ever stayed. These factors included canopy cover,topographic feature,elevation,slope aspect,slope degree, vegetation type,the distance to water,human disturbance,numbers of trees,dead wood,cutting trees, DBH (diameter of breast height of tree),fruit abundance on the ground. The analysis indicated that in winter,M. mulatto tended to stay at elevations ranging from 2 500 m to 3 200 m,and selected the 20° ~ 40° mountain slope with 60%-100% canopy cover. M. mulatto preferred evergreen broadleaf forests, where there were more trees with DBH>20 cm. They tended to stay in the forests far from human disturbance (>500 m) ,and close to water resource.%2009年12月至2010年2月,在白马雪山自然保护区格华箐对一群数量约为50只的野生猕猴冬季栖息地的选择进行初步调查.根据记录的猕猴活动位点,设置60个20m×20m的样方,测定了14个生态因子(郁闭度、地形特征、海拔、坡向、坡度、坡位、植被类型、水源距离、人为干扰、乔木数、死树情况、砍伐情况、乔木胸径、地面果实数).主成分分析表明,格华箐猕猴冬季偏好在坡度20°~40°、郁闭度在60%~100%的山坡坡面活动;活动区间一般在海拔2 500~3 200m;比较喜欢常绿阔叶林,喜欢的乔木平均胸径>20cm;喜欢远离人群(>500m)的生境;较为偏好离水源较近的栖息环境.

  15. Social rank and cortisol among female rhesus macaques (Macaca mulatta)

    Institute of Scientific and Technical Information of China (English)

    Dong-Dong QIN; Joshua Dominic Rizak; Xiao-Li FENG; Xun-Xun CHU; Shang-Chuan YANG; Chun-Lu LI; Long-Bao LV; Yuan-Ye MA; Xin-Tian HU

    2013-01-01

    In animal societies,some stressful events can lead to higher levels of physiological stress.Such stressors,like social rank,also predict an increased vulnerability to an array of diseases.However,the physiological relationship between social rank and stress varies between different species,as well as within groups of a single species.For example,dominant individuals are more socially stressed at times,while at other times it is the subordinate ones who experience this stress.Together,these variations make it difficult to assess disease vulnerability as connected to social interactions.In order to leam more about how physiological rank relationships vary between groups of a single species,cortisol measurements from hair samples were used to evaluate the effects of dominance rank on long-term stress levels in despotic and less stringent female rhesus macaque hierarchal groups.In despotic groups,cortisol levels were found not to be correlated with social rank,but a negative correlation was found between social rank and cortisol levels in less stringent hierarchies.Low ranking monkeys in less stringent groups secreted elevated levels of cortisol compared to higher ranking animals.These data suggest that variations in the strictness of the dominance hierarchy are determining factors in rank related stress physiology.The further consideration of nonhuman primate social system diversity and the linear degree of their hierarchies may allow for the development of valid rank-related stress models that will help increase our understanding and guide the development of new therapeutics for diseases related to human socioeconomic status.

  16. Maternal effects on offspring mortality in rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Blomquist, Gregory E

    2013-03-01

    The genetics of primate life histories are poorly understood, but quantitative genetic patterns in other mammals suggest phenotypic differences among individuals early in life can be strongly affected by interactions with mothers or other caretakers. I used generalized linear mixed model extensions of complex pedigree quantitative genetic techniques to explore regression coefficients and variance components for infant and juvenile mortality rates across prereproductive age classes in the semifree ranging Cayo Santiago rhesus macaques. Using a large set of records (maximum n = 977 mothers, 6,240 offspring), strong maternal effects can be identified early in development but they rapidly "burn off" as offspring age and mothers become less consistent buffers from increasingly prominent environmental variation. The different ways behavioral ecologists and animal breeders have defined and studied maternal effects can be subsumed, and even blended, within the quantitative genetic framework. Regression coefficients identify loss of the mother, maternal age, and offspring age within their birth cohort as having significant maternal effects on offspring mortality, while variance components for maternal identity record significant maternal influence in the first month of life.

  17. Inbreeding and inbreeding depression in endangered red wolves (Canis rufus).

    Science.gov (United States)

    Brzeski, Kristin E; Rabon, David R; Chamberlain, Michael J; Waits, Lisette P; Taylor, Sabrina S

    2014-09-01

    In natural populations, the expression and severity of inbreeding depression can vary widely across taxa. Describing processes that influence the extent of inbreeding and inbreeding depression aid in our understanding of the evolutionary history of mating systems such as cooperative breeding and nonrandom mate selection. Such findings also help shape wildlife conservation theory because inbreeding depression reduces the viability of small populations. We evaluated the extent of inbreeding and inbreeding depression in a small, re-introduced population of red wolves (Canis rufus) in North Carolina. Since red wolves were first re-introduced in 1987, pedigree inbreeding coefficients (f) increased considerably and almost every wild born wolf was inbred (average f = 0.154 and max f = 0.383). The large inbreeding coefficients were due to both background relatedness associated with few founders and numerous close relative matings. Inbreeding depression was most evident for adult body size and generally absent for direct fitness measures such as reproductive success and survival; no lethal equivalents (LE = 0.00) were detected in juvenile survival. The lack of strong inbreeding depression in direct measures of fitness could be due to a founder effect or because there were no outbred individuals for comparison. Our results highlight the variable expression of inbreeding depression across traits and the need to measure a number of different traits when evaluating inbreeding depression in a wild population. © 2014 John Wiley & Sons Ltd.

  18. Inbreeding and brood stock management

    National Research Council Canada - National Science Library

    Tave, Douglas

    1999-01-01

    This manual, written for extension workers, aquaculturists, and those who work with inbreeding in cultured fish populations and describes management techniques that can be used to prevent or minimize inbreeding...

  19. Postcopulatory inbreeding avoidance in guppies

    National Research Council Canada - National Science Library

    Fitzpatrick, J. L; Evans, J. P

    2014-01-01

    .... Here, we examine the potential for paternity biases to favour unrelated males when their sperm compete for fertilizations though postcopulatory inbreeding avoidance mechanisms in the guppy, P oecilia reticulata...

  20. Academic Inbreeding in the Portuguese Academia

    Science.gov (United States)

    Tavares, Orlanda; Cardoso, Sónia; Carvalho, Teresa; Sousa, Sofia Branco; Santiago, Rui

    2015-01-01

    This paper analyses the inbreeding phenomena in Portuguese public universities. Inbreeding is defined as the recruitment of academics by the same institution that awarded their PhDs. Focusing on 1,217 PhD-holding Portuguese academics, belonging to four public universities and to six disciplinary areas, inbreeding is analysed in order to understand…

  1. White-cheeked macaque (Macaca leucogenys): A new macaque species from Medog, southeastern Tibet.

    Science.gov (United States)

    Li, Cheng; Zhao, Chao; Fan, Peng-Fei

    2015-07-01

    We describe a newly discovered Macaca species from the Medog, in southeastern Tibet, China, Macaca leucogenys sp. nov or the "white-cheeked macaque". Based on 738 photos taken during direct observations and captured by camera traps this new species appears to be distinct from the Macaca sinica species group. Moreover, the species is distinguished from all potential sympatric macaque species (M. mulatta, M. thibetana, M. assamensis, and M. munzala) in exhibiting a suite of pelage characteristics including relatively uniform dorsal hair pattern, hairy ventral pelage, relative hairless short tail, prominent pale to white side- and chin-whiskers creating a white cheek and round facial appearance, dark facial skin on the muzzle, long and thick hairs on its neck, and a round rather than arrow-shaped male genitalia. This new macaque species was found to exploit a diverse set of habitat types from tropical forest at 1395 m, to primary and secondary evergreen broad-leaved forest at 2000 m, as well as mixed broadleaf-conifer forest at 2700 m. Its range may extend to neighboring counties in Tibet and the part of southeastern Tibet controlled by India. The white-cheeked macaque is threatened by illegal hunting and the construction of hydropower stations. Discovery of this new primate species further highlights the high value for biodiversity conservation of southeastern Tibet and calls for more intensive surveys, studies, and environmental protection in this area.

  2. Taxonomy Icon Data: rhesus monkey [Taxonomy Icon

    Lifescience Database Archive (English)

    Full Text Available acaca_mulatta_L.png Macaca_mulatta_NL.png Macaca_mulatta_S.png Macaca_mulatta_NS.png http://biosciencedbc.jp/taxonomy..._icon/icon.cgi?i=Macaca+mulatta&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Macaca+mulatta...&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Macaca+mulatta&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Macaca+mulatta&t=NS ...

  3. Serum Cobalamin (Vitamin B12) Concentrations in Rhesus Macaques (Macaca mulatta) and Pigtailed Macaques (Macaca nemestrina) with Chronic Idiopathic Diarrhea.

    Science.gov (United States)

    Izzi, Jessica M; Beck, Sarah E; Adams, Robert J; Metcalf Pate, Kelly A; Hutchinson, Eric K

    2016-01-01

    Chronic diarrhea poses a significant threat to the health of NHP research colonies, and its primary etiology remains unclear. In macaques, the clinical presentation of intractable diarrhea and weight loss that are accompanied by inflammatory infiltrates within the gastrointestinal tract closely resembles inflammatory bowel disease of humans, dogs, and cats, in which low serum and tissue cobalamin (vitamin B12) levels are due to intestinal malabsorption. We therefore hypothesized that macaques with chronic idiopathic diarrhea (CID) have lower serum cobalamin concentrations than do healthy macaques. Here we measured serum cobalamin concentrations in both rhesus and pigtailed macaques with CID and compared them with those of healthy controls. Serum cobalamin levels were 2.5-fold lower in pigtailed macaques with CID than control animals but did not differ between rhesus macaques with CID and their controls. This finding supports the use of serum cobalamin concentration as an adjunct diagnostic tool in pigtailed macaques that present with clinical symptoms of chronic gastrointestinal disease. This use of serum vitamin B12 levels has implications for the future use of parenteral cobalamin supplementation to improve clinical outcomes in this species.

  4. Molecular mapping of striatal subdivisions in juvenile Macaca Mulata

    Science.gov (United States)

    O’Connor, Joann; Muly, Emil C.; Hemby, Scott E.

    2016-01-01

    The striatum of the primate brain can be subdivided into three distinct anatomical subregions: caudate (CAU), putamen (PUT), and ventral striatum (VS). Although these subregions share several anatomical connections, cell morphological, and histochemical features, they differ considerably in their vulnerability to different neurological and psychiatric diseases, and these brain regions have significantly different functions in health and disease. In order to better understand the molecular underpinnings of the different disease and functional vulnerabilities, transcriptional profiles were generated from the CAU, PUT, and VS of five juvenile rhesus macaques (Macaca mulatta) using human cDNA neuromicroarrays containing triplicate spots of 1227 cDNAs. Differences in microarray gene expression were assessed using z score analysis and 1.5-fold change between paired subregions. Clustering of genes based on dissimilarity of expression patterns between regions revealed subregion specific expression profiles encoding G-protein-coupled receptor signaling transcripts, transcription factors, kinases and phosphatases, and cell signaling and signal transduction transcripts. Twelve transcripts were examined using quantitative real-time PCR (qPCR), and 81% demonstrated alterations similar to those seen with microarray analysis, some of which were statistically significant. Subregion specific transcription profiles support the anatomical differentiation and potential disease vulnerabilities of the respective subregions. PMID:16455077

  5. The socioendocrinology of adolescent development in male rhesus monkeys (Macaca mulatta).

    Science.gov (United States)

    Dixson, A F; Nevison, C M

    1997-04-01

    Observations were made on four captive breeding groups of rhesus monkeys in order to measure hormonal, behavioral, and genital changes in adolescent males during the annual mating season. Three questions were addressed with regard to possible effects of social environment upon reproductive maturation: (1) Does male agonistic rank influence adolescent development? (2) Does affiliation between adolescent males and adult females during the mating season influence the males' reproductive development? (3) Does maternal rank exert any effect upon reproductive maturation in adolescent sons? In many (but not all) cases male rank was positively correlated with circulating testosterone and testes weights during the mating season. Affiliative behavior (allogrooming and sexual interactions) between adolescents and adult females in their social groups bore no relationship to the degree of reproductive maturation in males. Mounts involving intromission were infrequent, but sons of high-ranking mothers gained significantly more intromissions than sons of lower-ranking females. Maternal rank was also found to correlate with circulating testosterone levels, testes weights, growth of the baculum (os penis), and maintenance of body weight in adolescent sons during the mating season. By contrast, levels of beta-endorphin in the cerebrospinal fluid of adolescent males did not correlate with social rank, testosterone levels, or genital development. These findings point to possible effects of maternal rank, as well as intermale agonistic rank, in determining reproductive maturation during adolescence in the male rhesus monkey.

  6. Inhaled oxytocin amplifies both vicarious reinforcement and self reinforcement in rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Chang, Steve W C; Barter, Joseph W; Ebitz, R Becket; Watson, Karli K; Platt, Michael L

    2012-01-17

    People attend not only to their own experiences, but also to the experiences of those around them. Such social awareness profoundly influences human behavior by enabling observational learning, as well as by motivating cooperation, charity, empathy, and spite. Oxytocin (OT), a neurosecretory hormone synthesized by hypothalamic neurons in the mammalian brain, can enhance affiliation or boost exclusion in different species in distinct contexts, belying any simple mechanistic neural model. Here we show that inhaled OT penetrates the CNS and subsequently enhances the sensitivity of rhesus macaques to rewards occurring to others as well as themselves. Roughly 2 h after inhaling OT, monkeys increased the frequency of prosocial choices associated with reward to another monkey when the alternative was to reward no one. OT also increased attention to the recipient monkey as well as the time it took to render such a decision. In contrast, within the first 2 h following inhalation, OT increased selfish choices associated with delivery of reward to self over a reward to the other monkey, without affecting attention or decision latency. Despite the differences in species typical social behavior, exogenous, inhaled OT causally promotes social donation behavior in rhesus monkeys, as it does in more egalitarian and monogamous ones, like prairie voles and humans, when there is no perceived cost to self. These findings potentially implicate shared neural mechanisms.

  7. Reproductive efficiency of captive Chinese- and Indian-origin rhesus macaque (Macaca mulatta) females.

    Science.gov (United States)

    Kubisch, H Michael; Falkenstein, Kathrine P; Deroche, Chelsea B; Franke, Donald E

    2012-02-01

    Reproductive and survival records (n=2,913) from 313 Chinese-origin and 365 Indian-derived rhesus macaques at the Tulane National Primate Research Center (TNPRC) spanning three generations were studied. Least-squares analysis of variance procedures were used to compare reproductive and infant survival traits while proportional hazards regression procedures were used to study female age at death, number of infants born per female, and time from last birth to death. Chinese females were older at first parturition than Indian females because they were older when placed with males, but the two subspecies had similar first postpartum birth interval (1st PPBI) and lifetime postpartum birth interval (LPPBI). Females that gave birth to stillborn infants had shorter first postpartum birth intervals (1st PPBI) than females giving birth to live infants. Postpartum birth intervals decreased in females from age 3 to 12 but then increased again with advancing age. Chinese infants had a greater survival rate than Indian infants at 30 days, 6 months, and 1 year of age. Five hundred and forty-three females (80.01%) had uncensored, or true records for age at death, number of infants born per female, and time from the birth until death whereas 135 females (19.91%) had censored records for these traits. Low- and high-uncensored observations for age at death were 3 and 26 years for Chinese, and 3 and 23 years for Indian females. Uncensored number of infants born per female ranged from 1 to 15 for Chinese females and 1 to 18 for Indian females. Each of these traits was significantly influenced by the origin×generation interaction in the proportional hazards regression analyses, indicating that probabilities associated with age at death, number of infants born per female, and time from last birth to death for Chinese and Indian females did not rank the same across generations.

  8. Personality Traits in Rhesus Macaques (Macaca mulatta) Are Heritable but Do Not Predict Reproductive Output.

    Science.gov (United States)

    Brent, Lauren J N; Semple, Stuart; Maclarnon, Ann; Ruiz-Lambides, Angelina; Gonzalez-Martinez, Janis; Platt, Michael L

    2014-02-01

    There is growing evidence that behavioral tendencies, or "personalities," in animals are an important aspect of their biology, yet their evolutionary basis is poorly understood. Specifically, how individual variation in personality arises and is subsequently maintained by selection remains unclear. To address this gap, studies of personality require explicit incorporation of genetic information. Here, we explored the genetic basis of personality in rhesus macaques by determining the heritability of personality components and by examining the fitness consequences of those components. We collected observational data for 108 adult females living in three social groups in a free-ranging population via focal animal sampling. We applied principal component analysis to nine spontaneously occurring behaviors and identified six putative personality components, which we named Meek, Bold, Aggressive, Passive, Loner, and Nervous. All components were repeatable and heritable, with heritability estimates ranging from 0.14 to 0.35. We found no evidence of an association with reproductive output, measured either by infant survival or by interbirth interval, for any of the personality components. This finding suggests either that personality does not have fitness-related consequences in this population or that selection has acted to reduce fitness-associated variation in personality.

  9. Indirect Immunofluorescence, Serum Neutralization, and Viremia Responses of Thesus Monkeys (Macaca Mulatta) to Machupo Virus,

    Science.gov (United States)

    1985-08-22

    immunofluorescent antibody tests (iFAT) have been developed V: for several arenaviruses , none has been applied to the rhesus monkey model for Bolivian...though indirect immunofluorescent antibody tests (IUAT) have been developed for several arenaviruses , none has been applied to the rhesus monkey model for...specific for individual arenaviruses than the SN procedure. Substantial cross- reactivity by IFAT has been described between New World arenaviruses

  10. Focused-ultrasound termination of an early pregnancy in rhesus macaques (Macaca mulatta): a pilot study.

    Science.gov (United States)

    Du, Yong-Hong; Zou, Jian-Zhong; Bai, Jin; Zhan, Yang; Wu, Feng; Wang, Zhi-Biao

    2012-12-01

    We explored the effectiveness, safety, and feasibility of focused ultrasound in terminating undesired pregnancy. A high-intensity focused ultrasound therapeutic unit was employed to terminate early pregnancies in rhesus macaques. B-mode ultrasound incorporated within the system was used to locate and study the gestational sacs of 6 rhesus macaques with gestation ages of 37 to 66 days, and varying modes of ultrasound exposure were adopted in the termination of the early pregnancies of the rhesus macaques. After focused ultrasound exposure, B-mode ultrasound of the gestational sacs showed significant lethal changes. Of the 6 rhesus macaques, 5 underwent complete abortions whereas 1 rhesus macaque underwent an incomplete abortion. The rhesus macaques resumed their menstrual cycles 50 days after focused-ultrasound treatment. The results suggested that focused ultrasound could be safe, feasible, and effective in terminating early pregnancies in rhesus macaques. As a novel physical method, it may be a promising ablation for a potentially clinical application. Copyright © 2012 World Federation for Ultrasound in Medicine & Biology. Published by Elsevier Inc. All rights reserved.

  11. Effects of the macrolide drug tylosin on chronic diarrhea in rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Blackwood, Rebecca S; Tarara, Ross P; Christe, Kari L; Spinner, Abigail; Lerche, Nicholas W

    2008-02-01

    Diarrhea is the gastrointestinal disease most frequently encountered in captive rhesus macaques. The precise pathogenic mechanisms underlying chronic diarrhea in nonhuman primates are not well understood, but a persistent inflammatory component has been implicated strongly. This study evaluated the inflammatory changes in the colon of macaques with diarrhea and assessed the efficacy of a 10-d course of tylosin in a cohort of 21 animals with chronic diarrhea. Stool quality was evaluated daily, and fecal consistency was scored. Colonoscopies were performed; biopsy samples were characterized histologically and assayed for expression of TNFalpha mRNA. Blood samples collected pre-, mid-, and post-treatment were assayed for C-reactive protein (CRP). The results indicated that 63% of the animals receiving tylosin showed improvement in stool quality, compared with 10% in the sham-treated group. Histologically, 82% of animals in the tylosin-treated group had a reduction in the severity of colonic lesions post-treatment, compared with 40% of animals in the sham group. The amount of TNFalpha mRNA before treatment did not differ from that afterward in either tylosin- or sham-treated animals. CRP levels serially decreased in tylosin-treated monkeys; the average post-treatment CRP value for tylosin-treated animals was 11.96 +/- 3.86 microg/ml compared with 26.48 +/- 4.86 microg/ml for sham-treated controls. In conclusion, tylosin significantly improved the fecal consistency score, significantly decreased colonic inflammation, and significantly decreased serum CRP levels post-treatment in rhesus macaques with chronic diarrhea.

  12. Architecture and connections of retrosplenial area 30 in the rhesus monkey (Macaca mulatta).

    Science.gov (United States)

    Morris, R; Petrides, M; Pandya, D N

    1999-07-01

    Because of the sharp curvature of the retrosplenial region around the splenium of the corpus callosum, standard coronal sections are not appropriate for architectonic analysis of its posteroventral part. In the present study, examination of the posteroventral retrosplenial region of the rhesus monkey in sections that were orthogonal to its axis of curvature (and therefore appropriate for architectonic analysis) has permitted definition of its architecture and precise extent. This analysis demonstrated that areas 29 and 30 of the retrosplenial cortex, as well as adjacent area 23 of the posterior cingulate cortex, extend together as an arch around the splenium of the corpus callosum and maintain their topographical relationship with one another throughout their entire course. Injections of anterograde and retrograde tracers confined to retrosplenial area 30 revealed that this area has reciprocal connections with adjacent areas 23, 19 and PGm, with the mid-dorsolateral part of the prefrontal cortex (areas 9, 9/46 and 46), with multimodal area TPO in the superior temporal sulcus, as well as the posterior parahippocampal cortex, the presubiculum and the entorhinal cortex. There are also bidirectional connections with the lateroposterior thalamic nucleus, as well as the laterodorsal and the anteroventral limbic thalamic nuclei. The connectivity of area 30 suggests that it may play a role in working memory processes subserved by the mid-dorsolateral frontal cortex in interaction with the hippocampal system.

  13. Measuring infant attachment security in rhesus macaques (Macaca mulatta): adaptation of the attachment Q-set.

    Science.gov (United States)

    Warfield, James J; Kondo-Ikemura, Kiyomi; Waters, Everett

    2011-02-01

    John Bowlby defined offspring-parent attachment as a relationship in which an infant or child uses one or a few preferred adults as a secure base from which to explore and as a haven of safety. He defined attachment security in terms of confidence in the adult's availability and responsiveness and the smooth organization of exploration and proximity seeking. Developmental psychologists have found this perspective productive in both observational and laboratory research. At the same time, they emphasize that such a construct cannot be operationalized in terms of one or a few behaviors. Instead, naturalistic observations of human infant attachment typically employ the Q-sort method to develop the Attachment q-set (AQS), 90 behaviorally descriptive items sorted in terms of how characteristic each item is of the infant's typical behavior. Meta-analyses of research using the AQS attest to its reliability and validity. This article reports an adaptation of the AQS to the task of assessing infant attachment security in nonhuman primates and illustrates its use. The availability of comparable measures of attachment security will contribute to an expanded understanding of patterns of attachment behavior in nonhuman primate societies and will facilitate interaction between comparative and developmental psychologists.

  14. Implantation and Maintenance of Chronic Jugular Venous Catheters in Rhesus Monkeys (Macaca mulatta),

    Science.gov (United States)

    1979-11-05

    ventilation. The vest was closed in back with a zipper, which was routinely secured with a safety pin . A drawstring at the waistallowed adjustable fit to the...Laboratories, Pearl River, NY). Routine flushing procedure was then resumed. Between flushings, the exposed end of the catheter was tied to a safety pin attached

  15. Factors affecting aggression among females in captive groups of rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Beisner, Brianne A; Isbell, Lynne A

    2011-11-01

    Captive groups of primates often exhibit higher rates of aggression than wild, free-ranging groups. It is important to determine which factors influence aggression in captivity because aggression, particularly intense aggression, can be harmful to animal health and well-being. In this study, we investigated the effect of ground substrate as well as season, rank, age, and group size on rates of agonistic interactions per female in seven captive groups of rhesus macaques (n = 70 females, 1,723 focal samples) at the California National Primate Research Center. Agonistic interactions were divided into three categories: displacements, mild aggression, and intense aggression. Females living in enclosures with gravel substrate were 1.7 times more likely to be involved in intense aggression (e.g. chases and physical contact) than females living in enclosures with grass (Poisson regression model: P females were at least 1.3 times more likely to be involved in mild (e.g. threats and lunges) aggression than lower-ranking females (low rank: P = 0.03; mid rank: P = 0.001). Females of all ranks were 1.5-1.9 times more likely to be involved in both intense and mild aggression during the breeding season than other seasons. Age and group size did not affect rates of mild or intense aggression. These findings indicate that although some aggression appears to be natural and unavoidable, i.e. aggression during the breeding season, the well-being of captive macaques can be improved by developing grass substrate in outdoor enclosures.

  16. Early Predictors of Impaired Social Functioning in Male Rhesus Macaques (Macaca mulatta)

    Science.gov (United States)

    Del Rosso, Laura A.; Seil, Shannon K.; Calonder, Laura A.; Madrid, Jesus E.; Bone, Kyle J.; Sherr, Elliott H.; Garner, Joseph P.; Capitanio, John P.; Parker, Karen J.

    2016-01-01

    Autism spectrum disorder (ASD) is characterized by social cognition impairments but its basic disease mechanisms remain poorly understood. Progress has been impeded by the absence of animal models that manifest behavioral phenotypes relevant to ASD. Rhesus monkeys are an ideal model organism to address this barrier to progress. Like humans, rhesus monkeys are highly social, possess complex social cognition abilities, and exhibit pronounced individual differences in social functioning. Moreover, we have previously shown that Low-Social (LS) vs. High-Social (HS) adult male monkeys exhibit lower social motivation and poorer social skills. It is not known, however, when these social deficits first emerge. The goals of this study were to test whether juvenile LS and HS monkeys differed as infants in their ability to process social information, and whether infant social abilities predicted later social classification (i.e., LS vs. HS), in order to facilitate earlier identification of monkeys at risk for poor social outcomes. Social classification was determined for N = 25 LS and N = 25 HS male monkeys that were 1–4 years of age. As part of a colony-wide assessment, these monkeys had previously undergone, as infants, tests of face recognition memory and the ability to respond appropriately to conspecific social signals. Monkeys later identified as LS vs. HS showed impairments in recognizing familiar vs. novel faces and in the species-typical adaptive ability to gaze avert to scenes of conspecific aggression. Additionally, multivariate logistic regression using infant social ability measures perfectly predicted later social classification of all N = 50 monkeys. These findings suggest that an early capacity to process important social information may account for differences in rhesus monkeys’ motivation and competence to establish and maintain social relationships later in life. Further development of this model will facilitate identification of novel biological targets for intervention to improve social outcomes in at-risk young monkeys. PMID:27788195

  17. Development of tactile discrimination capacity in Macaca mulatta. I. Normal infants.

    Science.gov (United States)

    Carlson, M

    1984-09-01

    Infant macaques between the ages of 7 and 25 weeks of age were trained on a series of manual tactile discrimination tasks. Tactile discrimination capacity, as measured by the most difficult level of size and texture discrimination tasks mastered, was the same for all ages of infants and did not differ from that of adults. Infants as young as 10 weeks of age were found to have a discrimination capacity similar to that of adult macaques, although an adult level of manual motor control had not been achieved by this early age. During the acquisition of size tasks, older animals made fewer errors than did younger animals, suggesting an improved efficiency in size discrimination capacity over the first 6 months of life. By contrast, the efficiency with which the younger animals mastered texture discrimination was superior to that of the older infants. The possible contributions of sensory experience or manual motor control to the maturation of sensory capacity were examined by applying 16 weeks of sensory restriction in one infant and a unilateral motor cortex lesion in another infant, respectively. Only transient impairment was found in either case suggesting that neither tactile experience nor motor control contribute significantly to the maturation of tactile discrimination capacity in infant macaques.

  18. Immunization with Recombinant Helicobacter pylori Urease in Specific-Pathogen-Free Rhesus Monkeys (Macaca mulatta)

    OpenAIRE

    Solnick, Jay V.; Canfield, Don R.; Hansen, Lori M.; Torabian, Sima Z.

    2000-01-01

    Immunization with urease can protect mice from challenge with Helicobacter pylori, though results vary depending on the particular vaccine, challenge strain, and method of evaluation. Unlike mice, rhesus monkeys are naturally colonized with H. pylori and so may provide a better estimate of vaccine efficacy in humans. The purpose of this study was to examine the effectiveness of H. pylori urease as a vaccine in specific-pathogen (H. pylori)-free rhesus monkeys. Monkeys raised from birth and do...

  19. Low Level (Sub Threshold), Large Spot Laser Irradiations of the Foveas of Macaca Mulatta.

    Science.gov (United States)

    1981-11-01

    1068. 1978. Glees, P. Spoerri, P. E. Tubular structures microtubuli and synaptic ribbon in monkey’s retinal receptors. Annales de Anatomia , 25 : 159...153 - 155. 1976. Hogan, M. J., Alvarado, J. A., Weddell, J. E. Histology of the human eye. An atlas and textbook. W. B. Saunders Co. 1971. S om61. Hori

  20. Immune correlates of aging in outdoor-housed captive rhesus macaques (Macaca mulatta

    Directory of Open Access Journals (Sweden)

    Didier Elizabeth S

    2012-11-01

    Full Text Available Abstract Background Questions remain about whether inflammation is a cause, consequence, or coincidence of aging. The purpose of this study was to define baseline immunological characteristics from blood to develop a model in rhesus macaques that could be used to address the relationship between inflammation and aging. Hematology, flow cytometry, clinical chemistry, and multiplex cytokine/chemokine analyses were performed on a group of 101 outdoor-housed captive rhesus macaques ranging from 2 to 24 years of age, approximately equivalent to 8 to 77 years of age in humans. Results These results extend earlier reports correlating changes in lymphocyte subpopulations and cytokines/chemokines with increasing age. There were significant declines in numbers of white blood cells (WBC overall, as well as lymphocytes, monocytes, and polymorphonuclear cells with increasing age. Among lymphocytes, there were no significant declines in NK cells and T cells, whereas B cell numbers exhibited significant declines with age. Within the T cell populations, there were significant declines in numbers of CD4+ naïve T cells and CD8+ naïve T cells. Conversely, numbers of CD4+CD8+ effector memory and CD8+effector memory T cells increased with age. New multiplex analyses revealed that concentrations of a panel of ten circulating cytokines/chemokines, IFNγ, IL1b, IL6, IL12, IL15, TNFα, MCP1, MIP1α, IL1ra, and IL4, each significantly correlated with age and also exhibited concordant pairwise correlations with every other factor within this group. To also control for outlier values, mean rank values of each of these cytokine concentrations in relation to age of each animal and these also correlated with age. Conclusions A panel of ten cytokines/chemokines were identified that correlated with aging and also with each other. This will permit selection of animals exhibiting relatively higher and lower inflammation status as a model to test mechanisms of inflammation status in aging with susceptibility to infections and vaccine efficacy.

  1. A Unilateral Cervical Spinal Cord Contusion Injury Model in Non-Human Primates (Macaca mulatta).

    Science.gov (United States)

    Salegio, Ernesto A; Bresnahan, Jacqueline C; Sparrey, Carolyn J; Camisa, William; Fischer, Jason; Leasure, Jeremi; Buckley, Jennifer; Nout-Lomas, Yvette S; Rosenzweig, Ephron S; Moseanko, Rod; Strand, Sarah; Hawbecker, Stephanie; Lemoy, Marie-Josee; Haefeli, Jenny; Ma, Xiaokui; Nielson, Jessica L; Edgerton, V R; Ferguson, Adam R; Tuszynski, Mark H; Beattie, Michael S

    2016-03-01

    The development of a non-human primate (NHP) model of spinal cord injury (SCI) based on mechanical and computational modeling is described. We scaled up from a rodent model to a larger primate model using a highly controllable, friction-free, electronically-driven actuator to generate unilateral C6-C7 spinal cord injuries. Graded contusion lesions with varying degrees of functional recovery, depending upon pre-set impact parameters, were produced in nine NHPs. Protocols and pre-operative magnetic resonance imaging (MRI) were used to optimize the predictability of outcomes by matching impact protocols to the size of each animal's spinal canal, cord, and cerebrospinal fluid space. Post-operative MRI confirmed lesion placement and provided information on lesion volume and spread for comparison with histological measures. We evaluated the relationships between impact parameters, lesion measures, and behavioral outcomes, and confirmed that these relationships were consistent with our previous studies in the rat. In addition to providing multiple univariate outcome measures, we also developed an integrated outcome metric describing the multivariate cervical SCI syndrome. Impacts at the higher ranges of peak force produced highly lateralized and enduring deficits in multiple measures of forelimb and hand function, while lower energy impacts produced early weakness followed by substantial recovery but enduring deficits in fine digital control (e.g., pincer grasp). This model provides a clinically relevant system in which to evaluate the safety and, potentially, the efficacy of candidate translational therapies.

  2. Effect of prolonged ketamine exposure on cardiovascular physiology in pregnant and infant rhesus monkeys (Macaca mulatta).

    Science.gov (United States)

    Hotchkiss, Charlotte E; Wang, Cheng; Slikker, William

    2007-11-01

    Physiologic measurements in nonhuman primates usually are collected from animals that are chemically or physically restrained. Both types of restraint may affect the parameters measured, and those effects can vary with age. Heart rate, respiratory rate, oxygen saturation, expired CO2, blood pressure, temperature, blood glucose, hematocrit, and venous blood gasses were measured in rhesus monkeys that were either infused intravenously with ketamine for 24 h or were cage-housed and physically restrained for sample collection. The subjects were pregnant monkeys at gestational day 120 to 123, infants 5 to 6 d old, and infants 35 to 37 d old. Heart rate and blood pressure were lower in ketamine-treated monkeys than physically restrained monkeys. Heart rate was higher in infants than adults, whereas blood pressure was lower in infants. Respiratory rate was higher in infants than adults and higher in physically restrained infants than ketamine-sedated infants but was not affected by ketamine in pregnant adults. Hematocrit was decreased in older infants. In summary, both physical restraint and ketamine sedation altered several physiologic parameters in pregnant and infant rhesus macaques. Investigators should consider these effects when designing experiments and evaluating experimental outcomes in monkeys.

  3. Serologic host response to Helicobacter pylori and Campylobacter jejuni in socially housed Rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Kienesberger, Sabine; Perez-Perez, Guillermo I; Rivera-Correa, Juan L; Tosado-Acevedo, Rafael; Li, Huilin; Dubois, Andre; Gonzalez-Martinez, Janis A; Dominguez-Bello, Maria Gloria; Blaser, Martin J

    2012-08-24

    Helicobacter pylori are successful colonizers of the human gastric mucosa. Colonization increases the risk of peptic ulcer disease and adenocarcinoma. However, potential benefits of H. pylori colonization include protection against early-onset asthma and against gastrointestinal infections. Campylobacter jejuni are a leading cause of bacterial diarrhea and complications include Guillain-Barré syndrome. Here, we describe the development of reliable serological assays to detect antibodies against those two bacteria in Rhesus macaques and investigated their distribution within a social group of monkeys. Two cohorts of monkeys were analyzed. The first cohort consisted of 30 monkeys and was used to establish an enzyme-linked immunosorbent assay (ELISA) for H. pylori antibodies detection. To evaluate colonization of those macaques, stomach biopsies were collected and analyzed for the presence of H. pylori by histology and culture. C. jejuni ELISAs were established using human serum with known C. jejuni antibody status. Next, plasma samples of the 89 macaques (Cohort 2) were assayed for antibodies and then statistically analyzed. An H. pylori IgG ELISA, which was 100% specific and 93% sensitive, was established. In contrast, the IgA ELISA was only 82% specific and 61% sensitive. The CagA IgG assay was 100% sensitive and 61% of the macaques were positive. In cohort 2, 62% macaques were H. pylori sero-positive and 52% were CagA positive. The prevalence of H. pylori IgG and CagA IgG increased with monkey age as described for humans. Of the 89 macaques 52% showed IgG against C. jejuni but in contrast to H. pylori, the sero-prevalence was not associated with increasing age. However, there was a drop in the IgG (but not in IgA) mean values between infant and juvenile macaques, similar to trends described in humans. Rhesus macaques have widespread exposure to H. pylori and C. jejuni, reflecting their social conditions and implying that Rhesus macaques might provide a model to study effects of these two important human mucosal bacteria on a population.

  4. Isolation and characterization of liver epithelial progenitor cells from normal adult rhesus monkeys (Macaca mulatta)

    Institute of Scientific and Technical Information of China (English)

    Lifang Jin; Shaohui Ji; Xianghui Tang; Xiangyu Guo; Yongqing Lu; Hongwei Chen; Hongkui Deng; Qi Zhou; Weizhi Ji

    2009-01-01

    @@ Dear Editor, Based on their ability to proliferate and the capacity to differentiate into specific cell types, hepatic progenitor/stem cells (HPCs) from adult human liver may have potential therapeutic effects on end-stage liver failure. In addition, adult HPCs have a reduced risk of teratoma formation and are not subject to the same ethical issues as fetal HPCs or embryonic stem cells [1]. The HPCs from rhesus monkeys are relevant because they may serve as a valuable preclinical model for assessment of cell therapy in humans. To date, there are no reports of HPCs or liver epithelial progenitor cells (LEPCs) isolated from normal adult rhesus monkey although a few studies in other species were reported [2, 3]. We report here for the first time the successful isolation of rhesus monkey LEPCs (mLEPCs) from normal adult livers (n=12).

  5. Information Seeking by Rhesus Monkeys ("Macaca mulatta") and Capuchin Monkeys ("Cebus apella")

    Science.gov (United States)

    Beran, Michael J.; Smith, J. David

    2011-01-01

    Animal metacognition is an active, growing research area, and one part of metacognition is flexible information-seeking behavior. In Roberts et al. (2009), pigeons failed an intuitive information-seeking task. They basically refused, despite multiple fostering experiments, to view a sample image before attempting to find its match. Roberts et al.…

  6. Physiological, Behavioral, and Scientific Impact of Different Fluid Control Protocols in the Rhesus Macaque (Macaca mulatta)

    Science.gov (United States)

    Bertrand, Henri; Mindus, Claire; Flecknell, Paul

    2016-01-01

    Abstract Rhesus macaques are an important model in behavioral neuroscience due to their advanced cognitive abilities. To motivate animals to engage in complex tasks, fluid rewards, in conjunction with fluid control protocols, are often used. The impact of these protocols on animal welfare is controversial. We compared two fluid control protocols against a protocol providing free access to water and evaluated the impacts on physiological states of hydration, behavioral measures of welfare, and scientific output. Blood physiology did not significantly differ between any of the protocols, and urine measures were indicative of well functioning, healthy kidneys. Changes in behaviors were limited, the main one being an increase in motivation to drink on the stricter fluid control protocol, and improved task performance early in the week. Overall, fluid control protocols had little measurable impact on the welfare of rhesus macaques while ensuring that scientific data of high quality could be obtained. PMID:27679812

  7. Selection and Pairing of ’Normal’ Rhesus Monkeys (Macaca mulatta) for Research.

    Science.gov (United States)

    1978-11-08

    ECG Blood Pressure ___Ocular Motility ___Pupillary Reflexes (Direct and Indirect) Fascial Muscle Tone ___Apply Mydriatic Agents to Dilate Eyes Head...selectees would be subjected to frequent handling and manipulation . The radiographs of seven other monkeys contained evidence of abdominal opacities

  8. Radical curative efficacy of tafenoquine combination regimens in Plasmodium cynomolgi-infected Rhesus monkeys (Macaca mulatta

    Directory of Open Access Journals (Sweden)

    Kenworthy David

    2011-07-01

    Full Text Available Abstract Background Tafenoquine is an 8-aminoquinoline being developed for radical cure (blood and liver stage elimination of Plasmodium vivax. During monotherapy treatment, the compound exhibits slow parasite and fever clearance times, and toxicity in glucose-6-phosphate dehydrogenase (G6PD deficiency is a concern. Combination with other antimalarials may mitigate these concerns. Methods In 2005, the radical curative efficacy of tafenoquine combinations was investigated in Plasmodium cynomolgi-infected naïve Indian-origin Rhesus monkeys. In the first cohort, groups of two monkeys were treated with a three-day regimen of tafenoquine at different doses alone and in combination with a three-day chloroquine regimen to determine the minimum curative dose (MCD. In the second cohort, the radical curative efficacy of a single-day regimen of tafenoquine-mefloquine was compared to that of two three-day regimens comprising tafenoquine at its MCD with chloroquine or artemether-lumefantrine in groups of six monkeys. In a final cohort, the efficacy of the MCD of tafenoquine against hypnozoites alone and in combination with chloroquine was investigated in groups of six monkeys after quinine pre-treatment to eliminate asexual parasites. Plasma tafenoquine, chloroquine and desethylchloroquine concentrations were determined by LC-MS in order to compare doses of the drugs to those used clinically in humans. Results The total MCD of tafenoquine required in combination regimens for radical cure was ten-fold lower (1.8 mg/kg versus 18 mg/kg than for monotherapy. This regimen (1.8 mg/kg was equally efficacious as monotherapy or in combination with chloroquine after quinine pre-treatment to eliminate asexual stages. The same dose of (1.8 mg/kg was radically curative in combination with artemether-lumefantrine. Tafenoquine was also radically curative when combined with mefloquine. The MCD of tafenoquine monotherapy for radical cure (18 mg/kg appears to be biologically equivalent to a 600-1200 mg dose in humans. At its MCD in combination with blood schizonticidal drugs (1.8 mg/kg, the maximum observed plasma concentrations were substantially lower than (20-84 versus 550-1,100 ng/ml after administration of 1, 200 mg in clinical studies. Conclusions Ten-fold lower clinical doses of tafenoquine than used in prior studies may be effective against P. vivax hypnozoites if the drug is deployed in combination with effective blood-schizonticidal drugs.

  9. Information Seeking by Rhesus Monkeys ("Macaca mulatta") and Capuchin Monkeys ("Cebus apella")

    Science.gov (United States)

    Beran, Michael J.; Smith, J. David

    2011-01-01

    Animal metacognition is an active, growing research area, and one part of metacognition is flexible information-seeking behavior. In Roberts et al. (2009), pigeons failed an intuitive information-seeking task. They basically refused, despite multiple fostering experiments, to view a sample image before attempting to find its match. Roberts et al.…

  10. Metabolism of /sup 14/C-labeled doxylamine succinate (Bendectin) in the rhesus monkey (Macaca mulatta)

    Energy Technology Data Exchange (ETDEWEB)

    Slikker, W. Jr.; Holder, C.L.; Lipe, G.W.; Korfmacher, W.A.; Thompson, H.C. Jr.; Bailey, J.R.

    1986-05-01

    The time-course of the metabolic fate of (/sup 14/C)doxylamine was determined after the p.o. administration of 13 mg/kg doxylamine succinate as Bendectin plus (/sup 14/C)doxylamine succinate to the rhesus monkey. Urine and plasma samples were analyzed by reversed-phase high performance liquid chromatography (HPLC), chemical derivatization, and mass spectrometry. The cumulative 48-hr urinary metabolic profile contained 81% of the administered radiolabeled dose and consisted of at least six radiolabeled peaks. They were peak 1: unknown polar metabolites (8% of dose); peak 2: 2-(1-phenyl-1-(2-pyridinyl)ethoxy) acetic acid, 1-(1-phenyl-1(2-pyridinyl)ethoxy) methanol, and another minor metabolite(s) (31%); peak 3: doxylamine-N-oxide (1%); peak 4a: N,N-didesmethyldoxylamine (17%); peak 4b: doxylamine (4%); and peak 5: N-desmethyldoxylamine (20%). The plasma metabolic profile was the same as the urinary profile except for the absence of doxylamine-N-oxide. The maximum plasma concentrations and elapsed time to attain these concentrations were as follows. Peak 1: 540 ng/mL, 4 hr; peak 2: 1700 ng/mL, 1 hr; peak 4a: 430 ng/mL, 4 hr; peak 4b: 930 ng/mL, 2 hr; and peak 5: 790 ng/mL, 2 hr. These data suggest that in the monkey, doxylamine metabolism follows at least four pathways: a minor pathway to the N-oxide; a minor pathway to unknown polar metabolites; a major pathway to mono- and didesmethyldoxylamine via successive N-demethylation; and a major pathway to side-chain cleavage products (peak 2) via direct side-chain oxidation and/or deamination.

  11. Do rhesus monkeys (Macaca mulatta) perceive the Zöllner illusion?

    Science.gov (United States)

    Agrillo, Christian; Parrish, Audrey E; Beran, Michael J

    2014-08-01

    A long-standing debate surrounds the issue of whether human and nonhuman animals share the same perceptual mechanisms. In humans, the Zöllner illusion occurs when two parallel lines appear to be convergent when oblique crosshatching lines are superimposed. Although one baboon study suggests that they too might perceive this illusion, the results of that study were unclear, whereas two recent studies suggest that birds see this illusion in the opposite direction from humans. It is currently unclear whether these mixed results are an artifact of the experimental design or reflect a peculiarity of birds' visual system or, instead, a wider phenomenon shared among nonhuman mammals. Here, we trained 6 monkeys to select the narrower of two gaps at the end of two convergent lines. Three different conditions were set up: control (no crosshatches), perpendicular (crosshatches not inducing the illusion), and Zöllner (crosshatches inducing the illusion in humans). During training, the degrees of convergence between the two lines ranged from 15° to 12°. Monkeys that reached the training criterion were tested with more difficult discriminations (11°-1°), including probe trials with parallel lines (0°). The results showed that monkeys perceived the Zöllner illusion in the same direction as humans. Comparison of these data with the data from bird studies points toward the existence of different orientation-tuned mechanisms between primate and nonprimate species.

  12. Single subcutaneous dosing of cefovecin in rhesus monkeys (Macaca mulatta)

    DEFF Research Database (Denmark)

    Bakker, J.; Thuesen, Line Risager; Braskamp, G.

    2011-01-01

    Cefovecin is a third-generation cephalosporin approved for antibacterial treatment with a 14-day dosing interval in dogs and cats. This antibiotic may also be useful for zoo and wildlife veterinary medicine, because of its broad spectrum and long duration of activity. The aim of the study...

  13. Rhesus Monkeys (Macaca mulatta) and Capuchin Monkeys (Cebus apella) Remember Future Responses in a Computerized Task

    Science.gov (United States)

    Beran, Michael J.; Evans, Theodore A.; Klein, Emily D.; Einstein, Gilles O.

    2012-01-01

    Planning is an important aspect of many daily activities for humans. Planning involves forming a strategy in anticipation of a future need. However, evidence that nonhuman animals can plan for future situations is limited, particularly in relation to the many other kinds of cognitive capacities that they appear to share with humans. One critical aspect of planning is the ability to remember future responses, or what is called prospective coding. Two monkey species performed a series of computerized tasks that required encoding a future response at the outset of each trial. Monkeys of both species showed competence in all tests that were given, providing evidence that they anticipated future responses, and that they appropriately engaged in those responses when the time was right for such responses. In addition, some tests demonstrated that monkeys even remembered future responses that were not as presently motivating as were other aspects of the task environment. These results indicated that monkeys can anticipate future responses and retain and implement those responses when appropriate. PMID:22545901

  14. Uncertain responses by humans and rhesus monkeys (Macaca mulatta) in a psychophysical same-different task

    Science.gov (United States)

    Shields, W. E.; Smith, J. D.; Washburn, D. A.; Rumbaugh, D. M. (Principal Investigator)

    1997-01-01

    The authors asked whether animals, like humans, use an uncertain response adaptively to escape indeterminate stimulus relations. Humans and monkeys were placed in a same-different task, known to be challenging for animals. Its difficulty was increased further by reducing the size of the stimulus differences, thereby making many same and different trials difficult to tell apart. Monkeys do escape selectively from these threshold trials, even while coping with 7 absolute stimulus levels concurrently. Monkeys even adjust their response strategies on short time scales according to the local task conditions. Signal-detection and optimality analyses confirm the similarity of humans' and animals' performances. Whereas associative interpretations account poorly for these results, an intuitive uncertainty construct does so easily. The authors discuss the cognitive processes that allow uncertainty's adaptive use and recommend further comparative studies of metacognition.

  15. Assessing significant (>30%) alopecia as a possible biomarker for stress in captive rhesus monkeys (Macaca mulatta).

    Science.gov (United States)

    Novak, Melinda A; Menard, Mark T; El-Mallah, Saif N; Rosenberg, Kendra; Lutz, Corrine K; Worlein, Julie; Coleman, Kris; Meyer, Jerrold S

    2017-01-01

    Hair loss is common in macaque colonies. Very little is known about the relationship between psychological stress and hair loss. We initially examined alopecia and hair cortisol concentrations in 198 (89 male) rhesus macaques from three primate centers and demonstrated replicability of our previous finding that extensive alopecia (>30% hair loss) is associated with increased chronic cortisol concentrations and significantly affected by facility. A subset of these monkeys (142 of which 67 were males) were sampled twice approximately 8 months apart allowing us to examine the hypotheses that gaining hair should be associated with decreases in cortisol concentrations and vice versa. Hair loss was digitally scored using ImageJ software for the first sample. Then visual assessment was used to examine the second sample, resulting in three categories of coat condition: (i) monkeys that remained fully haired; (ii) monkeys that remained alopecic (with more than 30% hair loss); or (iii) monkeys that showed more than a 15% increase in hair. The sample size for the group that lost hair was too small to be analyzed. Consistent with our hypothesis, monkeys that gained hair showed a significant reduction in hair cortisol concentrations but this effect only held for females. Coat condition changed little across sampling periods with only 25 (11 male) monkeys showing a greater than 15% gain of hair. Twenty (7 male) monkeys remained alopecic, whereas 97 (49 males) remained fully haired. Hair cortisol was highly correlated across samples for the monkeys that retained their status (remained alopecic or retained their hair). Am. J. Primatol. 79:e22547, 2017. © 2016 Wiley Periodicals, Inc.

  16. Rhesus monkeys (Macaca mulatta) adaptively adjust information seeking in response to information accumulated.

    Science.gov (United States)

    Tu, Hsiao-Wei; Pani, Alex A; Hampton, Robert R

    2015-11-01

    Metacognition consists of monitoring and control processes. Monitoring has been inferred when nonhumans use a "decline test" response to selectively escape difficult test trials. Cognitive control has been inferred from selective information-seeking behavior by nonhumans ignorant of needed knowledge. Here we describe a computerized paradigm that extends previous work and assesses dynamic interactions between monitoring and control. Monkeys classified images as containing birds, fish, flowers, or people. To-be-classified images were initially masked, and monkeys were trained to gradually reveal the images by touching a "reveal button." Monkeys could choose to classify images at any time or to reveal more of the images. Thus, they had the opportunity to assess when enough of an image had been revealed to support accurate classification. In Experiment 1, monkeys made more reveal responses before classifying when smaller amounts of the image were revealed by each button touch. In Experiment 2, to-be-classified images were shrunk and covered by 1 critical blocker among other blockers that did not provide information when removed. Monkeys made more reveal responses as the critical blocker was removed later in the trial. In Experiment 3, monkeys were presented with previously classified images with either more or fewer blockers obscuring the image than was the case when they chose to classify that image previously. Monkeys made more reveal responses when information was insufficient than when it was excessive. These results indicate that monkeys dynamically monitor evolving decision processes and adaptively collect information as necessary to maintain accuracy.

  17. Generalization of category knowledge and dimensional categorization in humans (Homo sapiens) and nonhuman primates (Macaca mulatta).

    Science.gov (United States)

    Smith, J David; Zakrzewski, Alexandria C; Johnston, Jennifer J R; Roeder, Jessica L; Boomer, Joseph; Ashby, F Gregory; Church, Barbara A

    2015-10-01

    A theoretical framework within neuroscience distinguishes humans' implicit and explicit systems for category learning. We used a perceptual-categorization paradigm to ask whether nonhumans share elements of these systems. Participants learned categories that foster implicit or explicit categorization in humans, because they had a multidimensional, information-integration (II) solution or a unidimensional, rule-based (RB) solution. Then humans and macaques generalized their category knowledge to new, untested regions of the stimulus space. II generalization was impaired, suggesting that II category learning is conditioned and constrained by stimulus generalization to its original, trained stimulus contexts. RB generalization was nearly seamless, suggesting that RB category knowledge in humans and monkeys has properties that grant it some independence from the original, trained stimulus contexts. These findings raise the questions of (a) how closely macaques' dimensional categorization verges on humans' explicit/declarative categorization, and (b) how far macaques' dimensional categorization has advanced beyond that in other vertebrate species.

  18. The comparative psychology of same-different judgments by humans (Homo sapiens) and monkeys (Macaca mulatta).

    Science.gov (United States)

    Smith, J David; Redford, Joshua S; Haas, Sarah M; Coutinho, Mariana V C; Couchman, Justin J

    2008-07-01

    The authors compared the performance of humans and monkeys in a Same-Different task. They evaluated the hypothesis that for humans the Same-Different concept is qualitative, categorical, and rule-based, so that humans distinguish 0-disparity pairs (i.e., same) from pairs with any discernible disparity (i.e., different); whereas for monkeys the Same-Different concept is quantitative, continuous, and similarity-based, so that monkeys distinguish small-disparity pairs (i.e., similar) from pairs with a large disparity (i.e., dissimilar). The results supported the hypothesis. Monkeys, more than humans, showed a gradual transition from same to different categories and an inclusive criterion for responding Same. The results have implications for comparing Same-Different performances across species--different species may not always construe or perform even identical tasks in the same way. In particular, humans may especially apply qualitative, rule-based frameworks to cognitive tasks like Same-Different.

  19. Rhesus macaques (Macaca mulatta are natural hosts of specific Staphylococcus aureus lineages.

    Directory of Open Access Journals (Sweden)

    Sanne van den Berg

    Full Text Available Currently, there is no animal model known that mimics natural nasal colonization by Staphylococcus aureus in humans. We investigated whether rhesus macaques are natural nasal carriers of S. aureus. Nasal swabs were taken from 731 macaques. S. aureus isolates were typed by pulsed-field gel electrophoresis (PFGE, spa repeat sequencing and multi-locus sequence typing (MLST, and compared with human strains. Furthermore, the isolates were characterized by several PCRs. Thirty-nine percent of 731 macaques were positive for S. aureus. In general, the macaque S. aureus isolates differed from human strains as they formed separate PFGE clusters, 50% of the isolates were untypeable by agr genotyping, 17 new spa types were identified, which all belonged to new sequence types (STs. Furthermore, 66% of macaque isolates were negative for all superantigen genes. To determine S. aureus nasal colonization, three nasal swabs from 48 duo-housed macaques were taken during a 5 month period. In addition, sera were analyzed for immunoglobulin G and A levels directed against 40 staphylococcal proteins using a bead-based flow cytometry technique. Nineteen percent of the animals were negative for S. aureus, and 17% were three times positive. S. aureus strains were easily exchanged between macaques. The antibody response was less pronounced in macaques compared to humans, and nasal carrier status was not associated with differences in serum anti-staphylococcal antibody levels. In conclusion, rhesus macaques are natural hosts of S. aureus, carrying host-specific lineages. Our data indicate that rhesus macaques are useful as an autologous model for studying S. aureus nasal colonization and infection prevention.

  20. Rhesus monkeys (Macaca mulatta) detect rhythmic groups in music, but not the beat

    NARCIS (Netherlands)

    Honing, H.; Merchant, H.; Háden, G.P.; Prado, L.; Bartolo, R.

    2012-01-01

    It was recently shown that rhythmic entrainment, long considered a human-specific mechanism, can be demonstrated in a selected group of bird species, and, somewhat surprisingly, not in more closely related species such as nonhuman primates. This observation supports the vocal learning hypothesis

  1. Studies on ’Macaca mulatta’ Infected with Rocky Mountain Spotted Fever

    Science.gov (United States)

    1976-09-10

    serum proteins were analyzed using an automated immuoprecipitin system utilizing available human serum standards and human antiserum.6 Thus, the...spectrophotometry. a Total protein b(TP) was determined using refractometry . Specific serum proteins were analyzed using an automated immuzoprecipitin...system utilizing available 6human serum standards and human antiserum. Thus, the monkey serum a -acid glycoprotein, haptoglobin, and albumin values

  2. Direct projections from the dorsal premotor cortex to the superior colliculus in the macaque (macaca mulatta).

    Science.gov (United States)

    Distler, Claudia; Hoffmann, Klaus-Peter

    2015-11-01

    The dorsal premotor cortex (PMd) is part of the cortical network for arm movements during reach-related behavior. Here we investigate the neuronal projections from the PMd to the midbrain superior colliculus (SC), which also contains reach-related neurons, to investigate how the SC integrates into a cortico-subcortical network responsible for initiation and modulation of goal-directed arm movements. By using anterograde transport of neuronal tracers, we found that the PMd projects most strongly to the deep layers of the lateral part of the SC and the underlying reticular formation corresponding to locations where reach-related neurons have been recorded, and from where descending tectofugal projections arise. A somewhat weaker projection targets the intermediate layers of the SC. By contrast, terminals originating from prearcuate area 8 mainly project to the intermediate layers of the SC. Thus, this projection pattern strengthens the view that different compartments in the SC are involved in the control of gaze and in the control or modulation of reaching movements. The PMD-SC projection assists in the participation of the SC in the skeletomotor system and provides the PMd with a parallel path to elicit forelimb movements.

  3. A simple multiplex polymerase chain reaction to determine ABO blood types of rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Premasuthan, A; Kanthaswamy, S; Satkoski, J; Smith, D G

    2011-06-01

    Rhesus macaques are the most common nonhuman primate model organism used in biomedical research. Their increasingly frequent use as subjects in studies involving transplantation requires that blood and other tissue antigens of donors and recipients be compatible. We report here an easy and rapid multiplex polymerase chain reaction (PCR) to determine the ABO blood group phenotypes of rhesus macaques that can be performed with only small amounts of DNA. We phenotyped 78 individuals and found this species to exhibit the A, B and AB phenotypes in frequencies that vary by geographic region. The probability of randomly pairing rhesus macaque donors and recipients that exhibit major ABO phenotype incompatibility is approximately 0.35 and 0.45 for Indian and Chinese rhesus macaques, respectively.

  4. No strings attached: Physiological Monitoring of Rhesus Monkeys (Macaca mulatta with Thermal Imaging.

    Directory of Open Access Journals (Sweden)

    Stephanos eIoannou

    2015-06-01

    Full Text Available Methodological challenges make physiological affective observations very restrictive as in many cases they take place in a laboratory setting rather than the animals’ natural habitat. In the current study using Infrared Thermal Imaging we examine the physiological thermal imprints of 5 macaques. The monkeys were exposed in 3 different experimental scenarios. Playing with a toy, food teasing as well as feeding. It was observed that during teasing the temperature of the region surrounding the eyes was higher than play as a result of rapid saccades directed at the food. Compared to play and teasing, a lower temperature accompanied feeding on the upper lip, nose and orbital region suggesting elevated levels of distress. These findings prove that thermal imaging is a reliable method of physiological monitoring the subject at a distance while preserving a semi-experimental setting.

  5. Age-dependent changes in innate immune phenotype and function in rhesus macaques (Macaca mulatta

    Directory of Open Access Journals (Sweden)

    Mark Asquith

    2012-06-01

    Full Text Available Aged individuals are more susceptible to infections due to a general decline in immune function broadly referred to as immune senescence. While age-related changes in the adaptive immune system are well documented, aging of the innate immune system remains less well understood, particularly in nonhuman primates. A more robust understanding of age-related changes in innate immune function would provide mechanistic insight into the increased susceptibility of the elderly to infection. Rhesus macaques have proved a critical translational model for aging research, and present a unique opportunity to dissect age-dependent modulation of the innate immune system. We examined age-related changes in: (i innate immune cell frequencies; (ii expression of pattern recognition receptors (PRRs and innate signaling molecules; (iii cytokine responses of monocytes and dendritic cells (DC following stimulation with PRR agonists; and (iv plasma cytokine levels in this model. We found marked changes in both the phenotype and function of innate immune cells. This included an age-associated increased frequency of myeloid DC (mDC. Moreover, we found toll-like receptor (TLR agonists lipopolysaccharide (TLR4, fibroblast stimulating ligand-1 (TLR2/6, and ODN2006 (TLR7/9 induced reduced cytokine responses in aged mDC. Interestingly, with the exception of the monocyte-derived TNFα response to LPS, which increased with age, TNFα, IL-6, and IFNα responses declined with age. We also found that TLR4, TLR5, and innate negative regulator, sterile alpha and TIR motif containing protein (SARM, were all expressed at lower levels in young animals. By contrast, absent in melanoma 2 and retinoic acid-inducible gene I expression was lowest in aged animals. Together, these observations indicate that several parameters of innate immunity are significantly modulated by age and contribute to differential immune function in aged macaques.

  6. Localization of orofacial representation in the corona radiata, internal capsule and cerebral peduncle in Macaca mulatta.

    Science.gov (United States)

    Morecraft, R J; Binneboese, A; Stilwell-Morecraft, K S; Ge, J

    2017-11-01

    Subcortical white matter injury is often accompanied by orofacial motor dysfunction, but little is known about the structural substrates accounting for these common neurological deficits. We studied the trajectory of the corticobulbar projection from the orofacial region of the primary (M1), ventrolateral (LPMCv), supplementary (M2), rostral cingulate (M3) and caudal cingulate (M4) motor regions through the corona radiata (CR), internal capsule (IC) and crus cerebri of the cerebral peduncle (ccCP). In the CR each pathway was segregated. Medial motor area fibers (M2/M3/M4) arched over the caudate and lateral motor area fibers (M1/LPMCv) curved over the putamen. At superior IC levels, the pathways were widespread, involving the anterior limb, genu and posterior limb with the M3 projection located anteriorly, followed posteriorly by projections from M2, LPMCv, M4 and M1, respectively. Inferiorly, all pathways maintained this orientation but shifted posteriorly, with adjacent fiber bundles overlapping minimally. In the ccCP, M3 fibers were located medially and M1 fibers centromedially, with M2, LPMCv, and M4 pathways overlapping in between. Finally, at inferior ccCP levels, all pathways overlapped. Following CR and superior IC lesions, the dispersed pathway distribution may correlate with acute orofacial dysfunction with spared pathways contributing to orofacial motor recovery. In contrast, the gradually commixed nature of pathway representation inferiorly may enhance fiber vulnerability and correlate with severe, prolonged deficits following lower subcortical and midbrain injury. Additionally, in humans these findings may assist in interpreting orofacial movements evoked during deep brain stimulation, and neuroimaging tractography efforts to localize descending orofacial motor pathways. © 2017 Wiley Periodicals, Inc.

  7. Serologic host response to Helicobacter pylori and Campylobacter jejuni in socially housed Rhesus macaques (Macaca mulatta

    Directory of Open Access Journals (Sweden)

    Kienesberger Sabine

    2012-08-01

    Full Text Available Abstract Background Helicobacter pylori are successful colonizers of the human gastric mucosa. Colonization increases the risk of peptic ulcer disease and adenocarcinoma. However, potential benefits of H. pylori colonization include protection against early-onset asthma and against gastrointestinal infections. Campylobacter jejuni are a leading cause of bacterial diarrhea and complications include Guillain-Barré syndrome. Here, we describe the development of reliable serological assays to detect antibodies against those two bacteria in Rhesus macaques and investigated their distribution within a social group of monkeys. Methods Two cohorts of monkeys were analyzed. The first cohort consisted of 30 monkeys and was used to establish an enzyme-linked immunosorbent assay (ELISA for H. pylori antibodies detection. To evaluate colonization of those macaques, stomach biopsies were collected and analyzed for the presence of H. pylori by histology and culture. C. jejuni ELISAs were established using human serum with known C. jejuni antibody status. Next, plasma samples of the 89 macaques (Cohort 2 were assayed for antibodies and then statistically analyzed. Results An H. pylori IgG ELISA, which was 100% specific and 93% sensitive, was established. In contrast, the IgA ELISA was only 82% specific and 61% sensitive. The CagA IgG assay was 100% sensitive and 61% of the macaques were positive. In cohort 2, 62% macaques were H. pylori sero-positive and 52% were CagA positive. The prevalence of H. pylori IgG and CagA IgG increased with monkey age as described for humans. Of the 89 macaques 52% showed IgG against C. jejuni but in contrast to H. pylori, the sero-prevalence was not associated with increasing age. However, there was a drop in the IgG (but not in IgA mean values between infant and juvenile macaques, similar to trends described in humans. Conclusions Rhesus macaques have widespread exposure to H. pylori and C. jejuni, reflecting their social conditions and implying that Rhesus macaques might provide a model to study effects of these two important human mucosal bacteria on a population.

  8. Teratogenicity studies on late blighted potatoes in nonhuman primates (Macaca mulatta and Saguinus labiatus).

    Science.gov (United States)

    Allen, J R; Marlar, R J; Chesney, C F; Helgeson, J P; Kelman, A; Weckel, G; Traisman, E; White, J W

    1977-02-01

    Female rhesus monkeys and marmosets were fed a diet containing blighted potatoes (Phytophthora infestans) at a level of 10g/kg per day for at least two weeks prior to breeding and six weeks following conception in order to gain additional information on the association of blighted potatoes and the development of anencephaly and spina bifida in primate species. There was an absence of either of these neural-tube defects in 32 rhesus and 14 marmoset infants whose mothers had received a blighted potato diet. In addition there were no cranial osseous defects. There were, however, two rhesus monkey infants with internal hydrocephalus whose mothers had consumed blighted potatoes.

  9. Characterization of single-nucleotide variation in Indian-origin rhesus macaques (Macaca mulatta

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    Wheeler David A

    2011-06-01

    Full Text Available Abstract Background Rhesus macaques are the most widely utilized nonhuman primate model in biomedical research. Previous efforts have validated fewer than 900 single nucleotide polymorphisms (SNPs in this species, which limits opportunities for genetic studies related to health and disease. Extensive information about SNPs and other genetic variation in rhesus macaques would facilitate valuable genetic analyses, as well as provide markers for genome-wide linkage analysis and the genetic management of captive breeding colonies. Results We used the available rhesus macaque draft genome sequence, new sequence data from unrelated individuals and existing published sequence data to create a genome-wide SNP resource for Indian-origin rhesus monkeys. The original reference animal and two additional Indian-origin individuals were resequenced to low coverage using SOLiD™ sequencing. We then used three strategies to validate SNPs: comparison of potential SNPs found in the same individual using two different sequencing chemistries, and comparison of potential SNPs in different individuals identified with either the same or different sequencing chemistries. Our approach validated approximately 3 million SNPs distributed across the genome. Preliminary analysis of SNP annotations suggests that a substantial number of these macaque SNPs may have functional effects. More than 700 non-synonymous SNPs were scored by Polyphen-2 as either possibly or probably damaging to protein function and these variants now constitute potential models for studying functional genetic variation relevant to human physiology and disease. Conclusions Resequencing of a small number of animals identified greater than 3 million SNPs. This provides a significant new information resource for rhesus macaques, an important research animal. The data also suggests that overall genetic variation is high in this species. We identified many potentially damaging non-synonymous coding SNPs, providing new opportunities to identify rhesus models for human disease.

  10. Effect of mother's dominance rank on offspring temperament in infant rhesus monkeys (Macaca mulatta).

    Science.gov (United States)

    Suarez-Jimenez, Benjamin; Hathaway, Amanda; Waters, Carlos; Vaughan, Kelli; Suomi, Stephen J; Noble, Pamela L; Pine, Daniel S; Fox, Nathan A; Nelson, Eric E

    2013-01-01

    In humans, temperament plays an important role in socialization and personality. Some temperaments, such as behavioral inhibition are associated with an increased risk for psychopathology. Nonhuman primates can serve as a model for neurobiological and developmental contributions to emotional development and several recent studies have begun to investigate temperament in nonhuman primates. In rhesus monkeys, dominance rank is inherited from the mother and is associated with social and emotional tendencies that resemble differences in temperament. The current study assessed differences in temperament in infant rhesus monkeys as a function of maternal dominance rank. Temperament was assessed in 26 infants (13 males) from birth until 6 months of age with a battery that included Brazelton test, human intruder test, human intruder-startle, cortisol stress reactivity, and home cage observations of interactions with peers and the mother. Throughout testing, infants lived with their mothers and a small group of other monkeys in indoor/outdoor runs. Dominance rank of the mothers within each run was rated as either low/middle (N = 18, 9 male) or high/alpha (N = 8, 4 female). Infants of high-ranking mothers displayed more intruder-directed aggression and reduced startle potentiation in the human intruder tests. Dominant offspring also had reduced levels cortisol and startle across development and spent more time away from mothers in the interaction tests. These results suggest that dominance of the mother may be reflected in behavioral reactivity of infants early in life. These findings set up future studies, which may focus on contributing factors to both dominance and temperament such as genetics, rearing, and socialization. Such factors are likely to interact across development in meaningful ways. These results also suggest future human-based studies of a similar relationship may be warranted, although social dominance is clearly more complex in human than macaque societies.

  11. Measuring inbreeding and inbreeding depression on pig growth from pedigree or SNP-derived metrics.

    Science.gov (United States)

    Silió, L; Rodríguez, M C; Fernández, A; Barragán, C; Benítez, R; Óvilo, C; Fernández, A I

    2013-10-01

    Multilocus homozygosity, measured as the proportion of the autosomal genome in homozygous genotypes or in runs of homozygosity, was compared with the respective pedigree inbreeding coefficients in 64 Iberian pigs genotyped using the Porcine SNP60 Beadchip. Pigs were sampled from a set of experimental animals with a large inbreeding variation born in a closed strain with a completely recorded multi-generation genealogy. Individual inbreeding coefficients calculated from pedigree were strongly correlated with the different SNP-derived metrics of homozygosity (r = 0.814-0.919). However, unequal correlations between molecular and pedigree inbreeding were observed at chromosomal level being mainly dependent on the number of SNPs and on the correlation between heterozygosities measured across different loci. A panel of 192 SNPs of intermediate frequencies was selected for genotyping 322 piglets to test inbreeding depression on postweaning growth performance (daily gain and weight at 90 days). The negative effects on these traits of homozygosities calculated from the genotypes of 168 quality-checked SNPs were similar to those of inbreeding coefficients. The results support that few hundreds of SNPs may be useful for measuring inbreeding and inbreeding depression, when the population structure or the mating system causes a large variance of inbreeding. © 2013 Blackwell Verlag GmbH.

  12. Inbreeding depression in red deer calves

    National Research Council Canada - National Science Library

    Walling, Craig A; Nussey, Daniel H; Morris, Alison; Clutton-Brock, Tim H; Kruuk, Loeske E B; Pemberton, Josephine M

    2011-01-01

    .... Here we investigated the consequences of variation in inbreeding coefficient for three juvenile traits, birth date, birth weight and first year survival, in a wild population of red deer, considering...

  13. Can multilocus heterozygosity reveal inbreeding depression?

    Science.gov (United States)

    Syukri, F; Nakajima, T; Nakajima, M

    2016-07-01

    Inbred lines of fish have been widely exploited as model organisms to determine the effect of inbreeding, which is often closely related to fitness such as endurance and productivity compared to morphological traits. Until now, much is unknown about the effects of inbreeding to fish. In the present study, inbred lines of guppies were used to examine the inbreeding effect on morphological traits corresponding to genotype variation. Two strains, called AY and NA1, were selected from the closed culture system. Both strains showed different levels of inbreeding coefficients when compared to microsatellite markers. The AY strain was less inbred as compared to NA1 strain. However, correlation between the standard lengths with multilocus heterozygosity (MLH) at the individual level was observed in the AY, but not in the NA1 strain. This indicated that highly inbred animals have higher similarity in morphological traits as compared to less inbred ones. The inbreeding process showed the importance of heterozygosity, even in laboratory-reared animals. This experiment illustrated the effects of inbreeding towards morphological and genetic changes. ?

  14. Evidence of inbreeding depression but not inbreeding avoidance in a natural house sparrow population.

    Science.gov (United States)

    Billing, Anna M; Lee, Aline M; Skjelseth, Sigrun; Borg, Asa A; Hale, Matthew C; Slate, Jon; Pärn, Henrik; Ringsby, Thor H; Saether, Bernt-Erik; Jensen, Henrik

    2012-03-01

    Inbreeding is common in small and threatened populations and often has a negative effect on individual fitness and genetic diversity. Thus, inbreeding can be an important factor affecting the persistence of small populations. In this study, we investigated the effects of inbreeding on fitness in a small, wild population of house sparrows (Passer domesticus) on the island of Aldra, Norway. The population was founded in 1998 by four individuals (one female and three males). After the founder event, the adult population rapidly increased to about 30 individuals in 2001. At the same time, the mean inbreeding coefficient among adults increased from 0 to 0.04 by 2001 and thereafter fluctuated between 0.06 and 0.10, indicating a highly inbred population. We found a negative effect of inbreeding on lifetime reproductive success, which seemed to be mainly due to an effect of inbreeding on annual reproductive success. This resulted in selection against inbred females. However, the negative effect of inbreeding was less strong in males, suggesting that selection against inbred individuals is at least partly sex specific. To examine whether individuals avoided breeding with close relatives, we compared observed inbreeding and kinship coefficients in the population with those obtained from simulations of random mating. We found no significant differences between the two, indicating weak or absent inbreeding avoidance. We conclude that there was inbreeding depression in our population. Despite this, birds did not seem to actively avoid mating with close relatives, perhaps as a consequence of constraints on mating possibilities in such a small population.

  15. Evidence of Inbreeding in Hodgkin Lymphoma.

    Directory of Open Access Journals (Sweden)

    Hauke Thomsen

    Full Text Available Genome-wide association studies (GWASs have identified several, mainly co-dominantly acting, single-nucleotide polymorphisms (SNPs associated with Hodgkin lymphoma (HL. We searched for recessively acting disease loci by performing an analysis of runs of homozygosity (ROH based on windows of homozygous SNP-blocks and by calculating genomic inbreeding coefficients on a SNP-wise basis. We used data from a previous GWAS with 906 cases and 1217 controls from a population with a long history of no matings between relatives. Ten recurrent ROHs were identified among 25 055 ROHs across all individuals but their association with HL was not genome-wide significant. All recurrent ROHs showed significant evidence for natural selection. As a novel finding genomic inbreeding among cases was significantly higher than among controls (P = 2.11*10-14 even after correcting for covariates. Higher inbreeding among the cases was mainly based on a group of individuals with a higher average length of ROHs per person. This result suggests a correlation of higher levels of inbreeding with higher cancer incidence and might reflect the existence of recessive alleles causing HL. Genomic inbreeding may result in a higher expression of deleterious recessive genes within a population.

  16. Simulated data supporting inbreeding rate estimates from incomplete pedigrees

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This data release includes: (1) The data from simulations used to illustrate the behavior of inbreeding rate estimators. Estimating inbreeding rates is particularly...

  17. Wright and Fisher on Inbreeding and Random Drift

    OpenAIRE

    Crow, James F

    2010-01-01

    Sewall Wright and R. A. Fisher often differed, including on the meaning of inbreeding and random gene frequency drift. Fisher regarded them as quite distinct processes, whereas Wright thought that because his inbreeding coefficient measured both they should be regarded as the same. Since the effective population numbers for inbreeding and random drift are different, this would argue for the Fisher view.

  18. Estimating inbreeding coefficients from NGS data

    DEFF Research Database (Denmark)

    Vieira, Filipe Garrett; Fumagalli, Matteo; Albrechtsen, Anders;

    2013-01-01

    Most methods for Next-Generation Sequencing (NGS) data analyses incorporate information regarding allele frequencies using the assumption of Hardy-Weinberg Equilibrium (HWE) as a prior. However, many organisms including domesticated, partially selfing or with asexual life cycles show strong...... deviations from HWE. For such species, and specially for low coverage data, it is necessary to obtain estimates of inbreeding coefficients (F) for each individual beforecalling genotypes. Here, we present two methods for estimating inbreeding coefficients from NGS data based on an Expectation...

  19. Mitochondrial DNA and two Y-chromosome genes of common long-tailed macaques (Macaca fascicularis fascicularis) throughout Thailand and vicinity.

    Science.gov (United States)

    Bunlungsup, Srichan; Imai, Hiroo; Hamada, Yuzuru; Matsudaira, Kazunari; Malaivijitnond, Suchinda

    2017-02-01

    Macaca fascicularis fascicularis is distributed over a wide area of Southeast Asia. Thailand is located at the center of their distribution range and is the bridge connecting the two biogeographic regions of Indochina and Sunda. However, only a few genetic studies have explored the macaques in this region. To shed some light on the evolutionary history of M. f. fascicularis, including hybridization with M. mulatta, M. f. fascicularis and M. mulatta samples of known origins throughout Thailand and the vicinity were analyzed by molecular phylogenetics using mitochondrial DNA (mtDNA), including the hypervariable region 1, and Y-chromosomal DNA, including SRY and TSPY genes. The mtDNA phylogenetic analysis divided M. f. fascicularis into five subclades (Insular Indonesia, Sundaic Thai Gulf, Vietnam, Sundaic Andaman sea coast, and Indochina) and revealed genetic differentiation between the two sides of the Thai peninsula, which had previously been reported as a single group of Malay peninsular macaques. From the estimated divergence time of the Sundaic Andaman sea coast subclade, it is proposed that after M. f. fascicularis dispersed throughout Southeast Asia, some populations on the south-easternmost Indochina (eastern Thailand, southern Cambodia and southern Vietnam at the present time) migrated south-westwards across the land bridge, which was exposed during the glacial period of the late Pleistocene epoch, to the southernmost Thailand/northern peninsular Malaysia. Then, some of them migrated north and south to colonize the Thai Andaman sea coast and northern Sumatra, respectively. The SRY-TSPY phylogenetic analysis suggested that male-mediated gene flow from M. mulatta southward to M. f. fascicularis was restricted south of, but close to, the Isthmus of Kra. There was a strong impact of the geographical factors in Thailand, such as the Isthmus of Kra, Nakhon Si Thammarat, and Phuket ranges and Sundaland, on M. f. fascicularis biogeography and their hybridization

  20. Monitoring inbreeding trends and inbreeding depression for economically important traits of Holstein cattle in Iran

    National Research Council Canada - National Science Library

    Rokouei, M; Vaez Torshizi, R; Moradi Shahrbabak, M; Sargolzaei, M; Sørensen, A.C

    2010-01-01

    Pedigree information of 852,443 registered Holstein cows and bulls, collected by the Animal Breeding Center of Iran from 1971 to 2007, was used to calculate inbreeding coefficients and their effect...

  1. Inbreeding in genome-wide selection

    NARCIS (Netherlands)

    Daetwyler, H.D.; Villanueva, B.; Bijma, P.; Woolliams, J.A.

    2007-01-01

    Traditional selection methods, such as sib and best linear unbiased prediction (BLUP) selection, which increased genetic gain by increasing accuracy of evaluation have also led to an increased rate of inbreeding per generation (¿FG). This is not necessarily the case with genome-wide selection, which

  2. Pediculosis in Macaca sylvanus of Gibraltar.

    Science.gov (United States)

    Cohn, Douglas L; Smith, Vincent; Pizarro, Mark; Jones-Engel, Lisa; Engel, Gregory; Fuentes, Agustin; Shaw, Eric; Cortes, John

    2007-04-10

    Pedicinus spp. parasitize several species of nonhuman primates. This is the first published report confirming the presence of Pedicinus albidus (Rudow) infestation in the free-ranging macaques (Macaca sylvanus) of Gibraltar. The diagnosis of pediculosis was based upon finding adult lice on host animals.

  3. Simulated data supporting inbreeding rate estimates from incomplete pedigrees

    Science.gov (United States)

    Miller, Mark P.

    2017-01-01

    This data release includes:(1) The data from simulations used to illustrate the behavior of inbreeding rate estimators. Estimating inbreeding rates is particularly difficult for natural populations because parentage information for many individuals may be incomplete. Our analyses illustrate the behavior of a newly-described inbreeding rate estimator that outperforms previously described approaches in the scientific literature.(2) Python source code ("analytical expressions", "computer simulations", and "empricial data set") that can be used to analyze these data.

  4. Efficiency of selection, as measured by single nucleotide polymorphism variation, is dependent on inbreeding rate in Drosophila melanogaster

    DEFF Research Database (Denmark)

    Demontis, Ditte; Pertoldi, Cino; Loeschcke, Volker

    2009-01-01

    It is often hypothesized that slow inbreeding causes less inbreeding depression than fast inbreeding at the same absolute level of inbreeding. Possible explanations for this phenomenon include the more efficient purging of deleterious alleles and more efficient selection for heterozygote...

  5. Magnitude and timing of inbreeding depression in Scots pine (Pinus sylvestris L.)

    NARCIS (Netherlands)

    Koelewijn, H.P.; Koski, V.; Savolainen, O.

    1999-01-01

    Inbreeding depression is a major selective force favoring outcrossing in flowering plants. However, some self- fertilization should weaken the harmful effects of inbreeding by exposing deleterious alleles to selection. This study examines the maintenance of inbreeding depression in the predominantly

  6. Feed-backs among inbreeding, inbreeding depression in sperm traits and sperm competition can drive evolution of costly polyandry.

    Science.gov (United States)

    Bocedi, Greta; Reid, Jane M

    2017-09-12

    Ongoing ambitions are to understand the evolution of costly polyandry and its consequences for species ecology and evolution. Emerging patterns could stem from feed-back dynamics between the evolving mating system and its genetic environment, defined by interactions among kin including inbreeding. However, such feed-backs are rarely considered in non-selfing systems. We use a genetically-explicit model to demonstrate a mechanism by which inbreeding depression can select for polyandry to mitigate the negative consequences of mating with inbred males rather than avoiding inbreeding. Specifically, given inbreeding depression in sperm traits, costly polyandry evolved to ensure female fertility, without requiring explicit inbreeding avoidance. We show the mechanisms behind two main feed-backs. First, resulting sperm competition caused evolution of sperm traits and further mitigated the negative effect of inbreeding depression on female fertility. Second, the evolving mating system fed back to decrease population-wide homozygosity, and hence inbreeding. However, net overall reduction was small due to compound effects on the variances in sex-specific reproductive success and paternity skew. Purging of deleterious mutations did not eliminate inbreeding depression in sperm traits and hence selection for polyandry. Polyandry evolution, both directly and through sperm competition, might consequently facilitate evolutionary rescue for populations experiencing sudden increases in inbreeding. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

  7. Monitoring inbreeding trends and inbreeding depression for economically important traits of Holstein cattle in Iran

    DEFF Research Database (Denmark)

    Rokouei, M; Torshizi, R Vaez; Shahrbabak, M Moradi

    2010-01-01

    Pedigree information of 852,443 registered Holstein cows and bulls, collected by the Animal Breeding Center of Iran from 1971 to 2007, was used to calculate inbreeding coefficients and their effect on production, reproduction, somatic cell count, calving ease, and longevity traits. The average in...

  8. Gene : CBRC-CBRE-01-1167 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available TED: hypothetical protein [Macaca mulatta] 1e-57 34% MSVCLYVCMFVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMS...VCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMSVCLYVCMS

  9. Gene : CBRC-ACAR-01-0853 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available ICTED: hypothetical protein [Macaca mulatta] 2e-16 30% MCQHRCCCCCFIIIMIIIIIRLANGLMCQHRCCCCCFIIIMIIIIIRLANGLMCQHRCCCCFIIIMIIIIIRLANGLM...CQHRCCCCCCCCFIMMMMMIIIRLANGLMCQHRCCCCCCCCCCFIIMMMIIIIRLANGLMCQHRCCCCCCFIIMMMMIIIRLANGLMCSTSLLCVVVLCCVCVYIIIIIIIIIIIIIIII ...

  10. Gene : CBRC-ACAR-01-0947 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CTED: hypothetical protein [Macaca mulatta] 2e-08 38% MLPRCANTLAEGSCIGNWLTFSSVSGSIRALAKVSALTLLAAASIFILSISIRACSICISLCLRACSICISLCLWACSI...CISLCLRACSICISLCLRACSICSRCSSSLKGRVRSAALASASAPATLLFSSRRAASLMCKAAREEMALPAAEDLLEWLCLDD

  11. Gene : CBRC-ACAR-01-0240 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CTED: hypothetical protein [Macaca mulatta] 2e-08 38% MLPRCANTLAEGSCIGNWLTFSSVSGSIRALAKVSALTLLAAASIFILSISIRACSICISLCLRACSICISLCLWACSI...CISLCLRACSICISLCLRACSICSRCSSSLKGRVRSAALASASAPATLLFSSRRAASLMCKAAREEMALPAAEDLLEWLCLDD

  12. Gene : CBRC-ACAR-01-0498 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CTED: hypothetical protein, partial [Macaca mulatta] 9e-05 29% MPNIIDIGQSGFGFFFSELHILHMLVYCGQIWGHLGAFTIIYLLFSFCLANL...TTLLDKSTIISPCLLFSFCLGNLIIVIDKSTIICLLFSFYLGNVIIVIDKSTIICLLFSFCLGNLIIVIDKSTIICLLFSFCLANLITLLDESTIICLLFSFCLANLITLLDESTIISHTSQ ...

  13. Gene : CBRC-TBEL-01-2322 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CTED: hypothetical protein [Macaca mulatta] 6e-25 29% MSISAILYMMIVLCTYMVVHMCISAILYMMIALCTYMVVHMSISAILYMMIILCTYMVVHMCIS...AILYMMIVLCTYMVVHMCISAILYMMIVLCTYMVVHMCISAILYMMIVLCTYMVVHMCISAILYMMIVLCTYMVVHMCISAILYMMIVLCTYMVVHMCISAILYMMIALCTYMVVHMCICCIYHCMESTQ ...

  14. Does haplodiploidy purge inbreeding depression in rotifer populations?

    Directory of Open Access Journals (Sweden)

    Ana M Tortajada

    Full Text Available BACKGROUND: Inbreeding depression is an important evolutionary factor, particularly when new habitats are colonized by few individuals. Then, inbreeding depression by drift could favour the establishment of later immigrants because their hybrid offspring would enjoy higher fitness. Rotifers are the only major zooplanktonic group where information on inbreeding depression is still critically scarce, despite the fact that in cyclical parthenogenetic rotifers males are haploid and could purge deleterious recessive alleles, thereby decreasing inbreeding depression. METHODOLOGY/PRINCIPAL FINDINGS: We studied the effects of inbreeding in two populations of the cyclical parthenogenetic rotifer Brachionus plicatilis. For each population, we compared both the parental fertilization proportion and F1 fitness components from intraclonal (selfed and interclonal (outcrossed crosses. The parental fertilization proportion was similar for both types of crosses, suggesting that there is no mechanism to avoid selfing. In the F1 generation of both populations, we found evidence of inbreeding depression for the fitness components associated with asexual reproduction; whereas inbreeding depression was only found for one of the two sexual reproduction fitness components measured. CONCLUSIONS/SIGNIFICANCE: Our results show that rotifers, like other major zooplanktonic groups, can be affected by inbreeding depression in different stages of their life cycle. These results suggest that haplodiploidy does not purge efficiently deleterious recessive alleles. The inbreeding depression detected here has important implications when a rotifer population is founded and intraclonal crossing is likely to occur. Thus, during the foundation of new populations inbreeding depression may provide opportunities for new immigrants, increasing gene flow between populations, and affecting genetic differentiation.

  15. Use of Femoral Head and Neck Ostectomy and Physical Therapy to Manage Osteoarthritis in a Rhesus Macaque (Macaca mulatta).

    Science.gov (United States)

    Uchihashi, Mayu; Hampel, Joseph A; Nemzek, Jean A; Saccone, Phillip A; Eaton, Kathryn A; Nowland, Megan H

    2015-06-01

    Osteoarthritis is associated with pain and immobility in both humans and animals. However, available resources for osteoarthritis management in captive NHP are limited. This case report describes a novel management strategy for a 10-y-old male macaque with unilateral hindlimb lameness, prominent muscle wasting, and severely limited range of motion. Radiographs of the affected limb showed lytic lesions of the femoral head. To relieve pain and improve mobility, femoral head and neck ostectomy (FHO) was performed, and multiple pharmacotherapies were initiated. The macaque also received a unique method of physical therapy that required no sedation, acted as enrichment, and was implemented by using a conventional caging system. The response to therapy was monitored by measuring thigh circumference in the operated and nonoperated limbs, which demonstrated improvement in both legs. The unique physical therapy in conjunction with surgery and pharmacotherapy benefited the macaque with osteoarthritis by reducing discomfort and improving mobility.

  16. Effects of maternal and infant characteristics on birth weight and gestation length in a colony of rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Hopper, Kelly J; Capozzi, Denise K; Newsome, Joseph T

    2008-12-01

    A retrospective study using maternal and birth statistics from an open, captive rhesus macaque colony was done to determine the effects of parity, exposure to simian retrovirus (SRV), housing, maternal parity, and maternal birth weight on infant birth weight, viability and gestation length. Retrospective colony statistics for a 23-y period indicated that birth weight, but not gestation length, differed between genders. Adjusted mean birth weights were higher in nonviable infants. Mothers positive for SRV had shorter gestations, but SRV exposure did not affect neonatal birth weights or viability. Infants born in cages had longer gestations than did those born in pens, but neither birth weight nor viability differed between these groups. Maternal birth weight did not correlate with infant birth weight but positively correlated with gestation length. Parity was correlated with birth weight and decreased viability. Increased parity of the mother was associated with higher birth weight of the infant. A transgenerational trend toward increasing birth weight was noted. The birth statistics of this colony were consistent with those of other macaque colonies. Unlike findings for humans, maternal birth weight had little predictive value for infant outcomes in rhesus macaques. Nonviable rhesus infants had higher birth weights, unlike their human counterparts, perhaps due to gestational diabetes occurring in a sedentary caged population. Similar to the situation for humans, multiparity had a protective effect on infant viability in rhesus macaques.

  17. Characterization of perfect microsatellite based on genome-wide and chromosome level in Rhesus monkey (Macaca mulatta).

    Science.gov (United States)

    Xu, Yongtao; Hu, Zongxiu; Wang, Chen; Zhang, Xiuyue; Li, Jing; Yue, Bisong

    2016-11-05

    Microsatellite studies based on chromosomes level would contribute to the biometric correlation analysis of chromosome and microsatellite applications on the specific chromosome. In this study, the total microsatellite length of 1,141,024 loci was 21.8Mb, which covered about 0.74% of the male Rhesus monkey genome. Perfect mononucleotide SSRs were the most abundant, followed by the pattern: perfect di->tetra->tri->penta->hexanucleotide SSRs. The main range of repeat times focused on 12-32 times (mono-), 7-23 times (di-), 5-10 times (tri-), 4-14 times (tetra-), 4-9 times (penta-), 4-8 times (hexa-), respectively. The largest SSRs number was found in chromosome 1 with 94,347 loci, followed by chromosome 3, 2, 7 and 5, and the smallest number was in chromosome 18. The predominant repeat types in male Rhesus monkey genome and chromosome Y were basically A, AC, AG, AAT, AAC, AAAT, AAAC, AAAG, AAACA and AAACAA. SSRs number of all chromosomes was closely positively correlated with chromosome sequence size (r=0.969, pmicrosatellite density (r=-0.456, 0.01microsatellites structural function, composition mode and molecular markers development in Rhesus monkey genome.

  18. Mucinous gastric hyperplasia in a colony of rhesus monkeys (Macaca mulatta) induced by polychlorinated biphenyl (Aroclor 1254)

    Energy Technology Data Exchange (ETDEWEB)

    Geistfeld, J.G.; Bond, M.G.; Bullock, B.C.; Varian, M.C.

    1982-02-01

    Since 1971, 45 of 259 male rhesus monkeys housed in a primate building have died of a chronic and progressive disease characterized by diarrhea, dehydration, weakness, gingivitis, emaciation, and alopecia. The principal necropsy finding in these monkeys, and in eight others killed for experimental purposes, was hypertrophic and hyperplastic mucinous gastropathy involving both the mucosa and submucosa. The toxic agent involved was identified as the polychlorinated biphenyl (PCB), Aroclor 1254. The suspected source of the toxic agent was a concrete sealer used during building construction.

  19. Sex-specific heritability of spontaneous lipid levels in an extended pedigree of Indian-origin rhesus macaques (Macaca mulatta.

    Directory of Open Access Journals (Sweden)

    Amanda Vinson

    Full Text Available The rhesus macaque is an important model for human atherosclerosis but genetic determinants of relevant phenotypes have not yet been investigated in this species. Because lipid levels are well-established and heritable risk factors for human atherosclerosis, our goal was to assess the heritability of lipoprotein cholesterol and triglyceride levels in a single, extended pedigree of 1,289 Indian-origin rhesus macaques. Additionally, because increasing evidence supports sex differences in the genetic architecture of lipid levels and lipid metabolism in humans and macaques, we also explored sex-specific heritability for all lipid measures investigated in this study. Using standard methods, we measured lipoprotein cholesterol and triglyceride levels from fasted plasma in a sample of 193 pedigreed rhesus macaques selected for membership in large, paternal half-sib cohorts, and maintained on a low-fat, low cholesterol chow diet. Employing a variance components approach, we found moderate heritability for total cholesterol (h²=0.257, P=0.032, LDL cholesterol (h²=0.252, P=0.030, and triglyceride levels (h²=0.197, P=0.034 in the full sample. However, stratification by sex (N=68 males, N=125 females revealed substantial sex-specific heritability for total cholesterol (0.644, P=0.004, females only, HDL cholesterol (0.843, P=0.0008, females only, VLDL cholesterol (0.482, P=0.018, males only, and triglyceride levels (0.705, P=0.001, males only that was obscured or absent when sexes were combined in the full sample. We conclude that genes contribute to spontaneous variation in circulating lipid levels in the Indian-origin rhesus macaque in a sex-specific manner, and that the rhesus macaque is likely to be a valuable model for sex-specific genetic effects on lipid risk factors for human atherosclerosis. These findings are a first-ever report of heritability for cholesterol levels in this species, and support the need for expanded analysis of these traits in this population.

  20. Induced neurocysticercosis in rhesus monkeys (Macaca mulatta) produces clinical signs and lesions similar to natural disease in man.

    Science.gov (United States)

    Chowdhury, N; Saleque, A; Sood, N K; Singla, L D

    2014-01-01

    Neurocysticercosis is a serious endemic zoonosis resulting in increased cases of seizure and epilepsy in humans. The genesis of clinical manifestations of the disease through experimental animal models is poorly exploited. The monkeys may prove useful for the purpose due to their behavior and cognitive responses mimicking man. In this study, neurocysticercosis was induced in two rhesus monkeys each with 12,000 and 6,000 eggs, whereas three monkeys were given placebo. The monkeys given higher dose developed hyperexcitability, epileptic seizures, muscular tremors, digital cramps at 10 DPI, and finally paralysis of limbs, followed by death on 67 DPI, whereas the monkeys given lower dose showed delayed and milder clinical signs. On necropsy, all the infected monkeys showed numerous cysticerci in the brain. Histopathologically, heavily infected monkeys revealed liquefactive necrosis and formation of irregular cystic cavities lined by atrophied parenchymal septa with remnants of neuropil of the cerebrum. In contrast, the monkeys infected with lower dose showed formation of typical foreign body granulomas characterized by central liquefaction surrounded by chronic inflammatory response. It was concluded that the inflammatory and immune response exerted by the host against cysticerci, in turn, led to histopathological lesions and the resultant clinical signs thereof.

  1. Induced Neurocysticercosis in Rhesus Monkeys (Macaca mulatta Produces Clinical Signs and Lesions Similar to Natural Disease in Man

    Directory of Open Access Journals (Sweden)

    N. Chowdhury

    2014-01-01

    Full Text Available Neurocysticercosis is a serious endemic zoonosis resulting in increased cases of seizure and epilepsy in humans. The genesis of clinical manifestations of the disease through experimental animal models is poorly exploited. The monkeys may prove useful for the purpose due to their behavior and cognitive responses mimicking man. In this study, neurocysticercosis was induced in two rhesus monkeys each with 12,000 and 6,000 eggs, whereas three monkeys were given placebo. The monkeys given higher dose developed hyperexcitability, epileptic seizures, muscular tremors, digital cramps at 10 DPI, and finally paralysis of limbs, followed by death on 67 DPI, whereas the monkeys given lower dose showed delayed and milder clinical signs. On necropsy, all the infected monkeys showed numerous cysticerci in the brain. Histopathologically, heavily infected monkeys revealed liquefactive necrosis and formation of irregular cystic cavities lined by atrophied parenchymal septa with remnants of neuropil of the cerebrum. In contrast, the monkeys infected with lower dose showed formation of typical foreign body granulomas characterized by central liquefaction surrounded by chronic inflammatory response. It was concluded that the inflammatory and immune response exerted by the host against cysticerci, in turn, led to histopathological lesions and the resultant clinical signs thereof.

  2. Long-Term Clinical Outcomes in Diabetic Rhesus Macaques (Macaca mulatta) Treated with Medroxyprogesterone Acetate for Endometriosis.

    Science.gov (United States)

    Connolly, Meghan A; Trentalange, Mark; Zeiss, Caroline J

    2016-01-01

    Depot medroxyprogesterone acetate (DMPA) is a common medical treatment for endometriosis in NHP. Because DMPA reportedly impairs glucoregulatory function in humans and rhesus macaques, as well as predisposes humans to diabetes mellitus (DM), we performed a retrospective study to further investigate its potential long-term clinical effects in animals with and without DM. Using a cohort of 29 rhesus macaques, we explored the hypotheses that DMPA treatment accelerates the onset of DM and that its use in rhesus macaques with endometriosis worsens clinical outcome measures (lifespan, body weight and body condition score). For both body weight and body condition score, a declining and statistically significant trend in mean values was evident as macaques developed either DM, or endometriosis or both. The addition of DMPA did not significantly alter this pattern. The presence of DM, endometriosis, or DMPA treatment statistically but not clinically significantly increased risk of death. Similarly, the presence of the 2 highly correlated variables endometriosis and DMPA treatment statistically but not clinically significantly increased the risk of incident DM. These results indicate that DMPA treatment was associated with worsening trends in lifespan and incident DM, however these trends did not achieve clinical significance in this cohort.

  3. Sex Dimorphism of Metatarsal of Macaca Mulatta%太行山猕猴跖骨性差

    Institute of Scientific and Technical Information of China (English)

    毛晓静; 王凤产; 胡凤霞; 赵哲; 赵晓进

    2014-01-01

    以39例成年太行山猕猴跖骨为标本(27雌,12雄),测量每根跖骨7个变量,采用SPSS 20.0进行数据分析,用7个跖骨变量建立逐步判别函数.选择性差最大的变量直接进行判别分析.结果表明,大部分变量性差显著(P <0.01),侧别差异很小.逐步判别分析选择出来的最好变量是跖骨长度.雄性判别率为78.6%~92.9%,雌性判别率为79.3%~93.1%,平均判别率为79.1%~93.0%.交互检验比回代检验判别率略微低一些.结果显示用跖骨长度变量可以很好地鉴定性别.%Determination of sex using metatarsals was carried out on a sample of 39 skeletons from the Taihang Mountains (12 males and 27 females). Seven measurements were taken on each metatarsal. Statistical analyses were performed using SPSS version 20. 0. Stepwise discriminant functions were performed using seven metatarsal variables. Only those variables that best distinguished between the sexes were selected and subjected to direct discriminant analy-sis. Statistically significant differences between sexes were found (p<0. 01) in most dimensions, but with no signifi-cant difference in the measurements between right and left metatarsals in either sex. In the stepwise discriminant func-tions the best variable selected was metatarsal length. Overall accuracies of the functions ranged from 79. 1% to 93. 0%, with correct sex assignment ranging from 54% to 89% for the male to 89% to 94% for the female for the o-riginal data, dropping slightly for cross-validation. The results showed that measurements of the metatarsals appear to be good discriminators of sex.

  4. Determination of the Infectious Dose of Helicobacter pylori during Primary and Secondary Infection in Rhesus Monkeys (Macaca mulatta)

    OpenAIRE

    Solnick, Jay V.; Hansen, Lori M.; Canfield, Don R.; Parsonnet, Julie

    2001-01-01

    We sought to determine the infectious dose of Helicobacter pylori during primary and secondary infection in the rhesus monkey and to determine whether preinoculation acid suppression is necessary to produce colonization. Mixed inoculation with three human-derived strains showed that H. pylori J166 is particularly adapted to colonization of rhesus monkeys, since it outcompeted two other strains. The minimum infectious dose of H. pylori J166 was 104 bacteria in specific-pathogen (H. pylori)-fre...

  5. Expression of gelatinases and tissue inhibitors of metallo- proteinases in the rhesus monkey (Macaca mulatta) corpus luteum

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Matrix metalloproteinases (MMPs) and their tissue inhibitors (TIMPs) are believed to play important roles in the formation and regression of corpus luteum (CL). This study is to investigate the expression of gelatinases (MMP-2, -9) and TIMPs in the rhesus monkey CL in both early and late luteal phases and during the early stages of pregnancy. Ovaries were collected from regularly cycling rhesus monkey at D5 and D15 following ovulation and at D12, D18 and D26 of pregnancy. In situ hybridization revealed that in the CL MMP-2 mRNA was expressed during both formation and regression, while MMP-9 mRNA was mainly localized in the late luteal phase. Reduction of MMP-2, -9 transcripts in the CL was observed during pregnancy. MMP-2 mRNA in the CL reduced to an undetectable level at D26 of pregnancy. TIMP-1 mRNA was highly expressed in the CL in both early and late luteal phases and persisted throughout the early stages of pregnancy. Strong signal for TIMP-2 mRNA was also detected in both luteal phases, and the level of TIMP-2 mRNA gradually increased with the progresses of pregnancy. No TIMP-3 mRNA was detected in the macaque CL in this study. In conclusion, these results suggest that MMP-2, -9 and TIMP-1, -2 may have functional roles in rhesus monkey CL. Coordinated expression of MMP-2, -9 and TIMP-2 may play a role in the maintaining of luteal function during early pregnancy. The unchanged expression pattern of TIMP-1 indicates that it may have other functions in the primate CL than inhibition of MMPs.

  6. Risk Factor Analysis May Provide Clues to Diarrhea Prevention in Outdoor-Housed Rhesus Macaques (Macaca mulatta)

    OpenAIRE

    Prongay, Kamm; Park, Byung; Murphy, Stephanie J

    2013-01-01

    Seventy-five percent of rhesus macaques at national primate research centers are housed outside. Annually, 15–39% of these animals experience diarrhea and require veterinary treatment for dehydration, electrolyte imbalance, or weight loss. An estimated 21–33% of these patients will die or be euthanized. Many studies have explored the various infectious etiologies of non-human primate diarrhea. However, there is little published information on diarrhea incidence rates and risk factors in outdo...

  7. Risk Factor Analysis May Provide Clues to Diarrhea Prevention in Outdoor-Housed Rhesus Macaques (Macaca mulatta)

    Science.gov (United States)

    PRONGAY, KAMM; PARK, BYUNG; MURPHY, STEPHANIE J.

    2014-01-01

    Seventy-five percent of rhesus macaques at national primate research centers are housed outside. Annually, 15–39% of these animals experience diarrhea and require veterinary treatment for dehydration, electrolyte imbalance, or weight loss. An estimated 21–33% of these patients will die or be euthanized. Many studies have explored the various infectious etiologies of non-human primate diarrhea. However, there is little published information on diarrhea incidence rates and risk factors in outdoor-housed rhesus macaques. Without this information, it is challenging to determine endemic and epidemic diarrhea levels, or to develop and evaluate mitigation strategies. Using electronic medical records, we conducted a retrospective cohort study to calculate diarrhea incidence rates for rhesus macaques (N = 3,181) housed in three different outdoor housing types (corrals, shelters, and temporary housing) at the Oregon National Primate Research Center between November 1, 2009 and October 31, 2010. With multiple logistic regression analysis, we determined the relative risk of housing type, sex, and age on development of diarrhea. Diarrhea incidence and mortality in our population was lower than many published ranges. Type of outdoor housing, age, and previous diarrhea episode were positively correlated with diarrhea risk. Younger animals in smaller shelters and temporary housing had a greater risk of acquiring diarrhea, with juvenile animals (0.7–3.9 years) having the highest mortality rate. Sex was not a risk factor, but adult females with diarrhea were more likely to develop life-threatening complications than adult males. We also constructed a predictive model for diarrhea-associated mortality using Classification and Regression Tree. Findings from this study will be used to develop and evaluate mitigation strategies in our outdoor-housed population and to provide a foundation for genetic susceptibility and immune function testing. PMID:23568382

  8. Mortality in Captive Rhesus Monkeys (Macaca mulatta) in China Due to Infection with Yersinia pseudotuberculosis Serotype O:1a.

    Science.gov (United States)

    Zhao, Na; Li, Meng; Amer, Said; Liu, Shelan; Luo, Jing; Wang, Shan; He, Hongxuan

    2016-09-01

    The most common serotypes of Yersinia pseudotuberculosis infecting non-human primates are serotypes O:1b, O:3, O:4, and O:7. The O:1a serotype has never been reported in non-human primates. The present study describes an outbreak of serotype O:1a with high fatality (6/18) in captive rhesus monkeys in China. Bacteria were isolated from different organs of the carcasses using standard microbiological procedures. The strain was identified using conventional and molecular techniques such as morphological and biochemical identification, serotype determination, PCR-sequence analysis based on the 16S rRNA gene, detection of virulence genes, and antimicrobial susceptibility testing. The pathogenicity was determined after experimental infection in mice. Taken together, the obtained data indicate that Y. pseudotuberculosis O:1a is a pathogen of concern and represents a potential threat to monkey conservation efforts.

  9. Age-dependent variation in behavior following acute ethanol administration in male and female adolescent rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Schwandt, Melanie L; Barr, Christina S; Suomi, Stephen J; Higley, James D

    2007-02-01

    There has been considerable focus on the adolescent stage of development in the study of alcohol use and the etiology of alcohol-related problems. Because adolescence is a process of dynamic change rather than a discrete or static stage of development, it is important to consider ontogenetic changes in the response to ethanol within the adolescent time period. In rodents, levels of ethanol-induced motor impairment have been shown to increase from early to late adolescence. This study investigated associations between behavior following acute ethanol administration and age, rearing condition (mother-reared vs nursery-reared), and serotonin transporter (rh5-HTTLPR) genotype in a sample of alcohol-naïve adolescent rhesus macaques. Rhesus macaques (n=97; 41 males, 56 females), ranging in age from 28 to 48 months, were administered intravenous (IV) doses of ethanol (2.2 g/kg for males, 2.0 g/kg for females) twice in 2 separate testing sessions. A saline/ethanol group (n=16; 8 males, 6 females) was administered saline in 1 testing session and ethanol in the second session. Following each IV injection, subjects underwent a 30-minute general motor behavioral assessment. Behavior in the saline/ethanol group was compared between the saline and ethanol-testing sessions using analysis of variance. Behavioral data for the larger study sample were averaged between the 2 testing sessions and summarized using factor analysis. Rotated factor scores were used as dependent variables in multiple regression analyses to test for relationships between behavior and age, rearing condition, and rh5-HTTLPR genotype. During the ethanol-testing session, behaviors indicative of motor impairment (stumbles, falls, sways, bumping the wall, and unsuccessful jumps) were frequently observed in the saline/ethanol group, while they did not occur under the saline-testing session. Factor analysis of behavior following ethanol administration in the larger study sample yielded 3 factors: Ataxia, Impaired Jumping Ability, and Stimulation. Significant negative correlations between age and Ataxia were found for both males and females. Females also exhibited positive correlations between age and Impaired Jumping Ability and age and Stimulation. No significant correlations were found with either rearing condition or rh5-HTTLPR genotype. These findings suggest that ontogenetic changes during adolescence in the behavioral response to ethanol differ between rodents and primates. Furthermore, sex differences in the behavioral response to ethanol appear to develop during adolescence.

  10. Medicinal management of corneal opacity in free ranging rhesus macaques (Macaca mulatta of Shivalik hills in Western Himalayas, Northern India

    Directory of Open Access Journals (Sweden)

    V. Kumar

    2015-05-01

    Full Text Available Corneal opacification was diagnosed in 17 free ranging rhesus macaques during detailed ophthalmic examination as a part of clinical health examination, at the monkey rescue sterilization centre in Hamirpur Himachal Pradesh, India. The cornea was completely opaque permitting only a little vision with respect to the affected eye. Medical management with topical ciprofloxacin and prednisolone along with ketoprofen and vitamin A was instituted. The corneal lesions subsided completely within one week following treatment. The treatment protocol successfully eliminated the discomfort and intraocular lesions with no serious subsequent irritation due to the treatment in these animals.

  11. Alzheimer's disease and methanol toxicity (part 2): lessons from four rhesus macaques (Macaca mulatta) chronically fed methanol.

    Science.gov (United States)

    Yang, Meifeng; Miao, Junye; Rizak, Joshua; Zhai, Rongwei; Wang, Zhengbo; Huma, Tanzeel; Li, Ting; Zheng, Na; Wu, Shihao; Zheng, Yingwei; Fan, Xiaona; Yang, Jianzhen; Wang, Jianhong; Yang, Shangchuan; Ma, Yuanye; Lü, Longbao; He, Rongqiao; Hu, Xintian

    2014-01-01

    A recently established link between formaldehyde, a methanol metabolite, and Alzheimer's disease (AD) pathology has provided a new impetus to investigate the chronic effects of methanol exposure. This paper expands this investigation to the non-human primate, rhesus macaque, through the chronic feeding of young male monkeys with 3% methanol ad libitum. Variable Spatial Delay Response Tasks of the monkeys found that the methanol feeding led to persistent memory decline in the monkeys that lasted 6 months beyond the feeding regimen. This change coincided with increases in tau protein phosphorylation at residues T181 and S396 in cerebrospinal fluid during feeding as well as with increases in tau phosphorylated aggregates and amyloid plaques in four brain regions postmortem: the frontal lobe, parietal lobe, temporal lobe, and the hippocampus. Tau phosphorylation in cerebrospinal fluid was found to be dependent on methanol feeding status, but phosphorylation changes in the brain were found to be persistent 6 months after the methanol feeding stopped. This suggested the methanol feeding caused long-lasting and persistent pathological changes that were related to AD development in the monkey. Most notably, the presence of amyloid plaque formations in the monkeys highlighted a marked difference in animal systems used in AD investigations, suggesting that the innate defenses in mice against methanol toxicity may have limited previous investigations into AD pathology. Nonetheless, these findings support a growing body of evidence that links methanol and its metabolite formaldehyde to AD pathology.

  12. The development of an instrument to measure global dimensions of maternal care in rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    McCormack, K; Howell, B R; Guzman, D; Villongco, C; Pears, K; Kim, H; Gunnar, M R; Sanchez, M M

    2015-01-01

    One of the strongest predictors of healthy child development is the quality of maternal care. Although many measures of observation and self-report exist in humans to assess global aspects of maternal care, such qualitative measures are lacking in nonhuman primates. In this study, we developed an instrument to measure global aspects of maternal care in rhesus monkeys, with the goal of complementing the individual behavioral data collected using a well-established rhesus macaque ethogram during the first months postpartum. The 22 items of the instrument were adapted from human maternal sensitivity assessments and a maternal Q-sort instrument already published for macaques. The 22 items formed four dimensions with high levels of internal reliability that represented major constructs of maternal care: (1) Sensitivity/Responsivity, (2) Protectiveness, (3) Permissiveness, and (4) Irritability. These dimensions yielded high construct validity when correlated with mother-infant frequency and duration behavior that was collected from focal observations across the first 3 postnatal months. In addition, comparisons of two groups of mothers (Maltreating vs. Competent mothers) showed significant differences across the dimensions suggesting that this instrument has strong concurrent validity, even after controlling for focal observation variables that have been previously shown to significantly differentiate these groups. Our findings suggest that this Instrument of Macaque Maternal Care has the potential to capture global aspects of the mother-infant relationship that complement individual behaviors collected through focal observations.

  13. Application of three-dimensional culture systems to study mammalian spermatogenesis, with an emphasis on the rhesus monkey (Macaca mulatta).

    Science.gov (United States)

    Huleihel, Mahmoud; Nourashrafeddin, Seyedmehdi; Plant, Tony M

    2015-01-01

    In vitro culture of spermatogonial stem cells (SSCs) has generally been performed using two-dimensional (2D) culture systems; however, such cultures have not led to the development of complete spermatogenesis. It seems that 2D systems do not replicate optimal conditions of the seminiferous tubules (including those generated by the SSC niche) and necessary for spermatogenesis. Recently, one of our laboratories has been able to induce proliferation and differentiation of mouse testicular germ cells to meiotic and postmeiotic stages including generation of sperm in a 3D soft agar culture system (SACS) and a 3D methylcellulose culture system (MCS). It was suggested that SACS and MCS form a special 3D microenvironment that mimics germ cell niche formation in the seminiferous tubules, and thus permits mouse spermatogenesis in vitro. In this review, we (1) provide a brief overview of the differences in spermatogenesis in rodents and primates, (2) summarize data related to attempts to generate sperm in vitro, (3) report for the first time formation of colonies/clusters of cells and differentiation of meiotic (expression of CREM-1) and postmeiotic (expression of acrosin) germ cells from undifferentiated spermatogonia isolated from the testis of prepubertal rhesus monkeys and cultured in SACS and MCS, and (4) indicate research needed to optimize 3D systems for in vitro primate spermatogenesis and for possible future application to man.

  14. Use of enclosures with functional vertical space by captive rhesus monkeys (Macaca mulatta) involved in biomedical research.

    Science.gov (United States)

    Clarence, Wendy M; Scott, Jennifer P; Dorris, Michael C; Paré, Martin

    2006-09-01

    We assessed space use by 2 pairs of captive female rhesus monkeys recently transferred into 2 enclosures moderately larger than their former traditional research cages and providing elevated perches at or above human eye level for all monkeys. This new space did not affect the ongoing biomedical research in which these captive monkeys were involved, and we sought to determine whether they used the elevated positions preferentially, as do wild animals. The frequency and duration of visits at each of the 9 distinct regions within these enclosures was calculated during 30-min morning and evening sessions over 20 d. We found that the monkeys frequented all regions of their enclosures in a similar manner during both morning and evening sessions. However, the duration spent at each region varied significantly between morning and evening sessions, with high perches being chosen preferentially in the evenings. Overall, the monkeys spent the majority of their time at elevated positions. These results support the view that access to functional vertical space provides a preferred environment for species- specific behavior and is an option that should be considered by other research facilities.

  15. Local and systemic changes associated with long-term, percutaneous, static implantation with titanium alloys in rhesus macaques (Macaca mulatta)

    Energy Technology Data Exchange (ETDEWEB)

    Frydman, Galit F.; Marini, Robert P.; Bakthavatchalu, Vasudevan; Biddle, Kathleen; Muthupalani, Sureshkumar; Vanderburg, Charles R.; Lai, Barry; Bendapudi, Pavan K.; Tompkins, Ronald G.; Fox, James G.

    2017-04-01

    Metal alloys are frequently used as implant materials in veterinary medicine. Recent studies suggest that many types of metal alloys may induce both local and systemic inflammatory responses. In this study, 37 rhesus macaques with long-term skull-anchored percutaneous titanium alloy implants (0-14 years duration) were evaluated for changes in their hematology, coagulation and serum chemistry profiles. Negative controls (n=28) did not have implants. All of the implanted animals were on IACUC-approved protocols and were not implanted for the purpose of this study. Animals with implants had significantly higher plasma D-dimer and lower antithrombin III concentrations compared with nonimplanted animals (p-values < 0.05). Additionally, animals with implants had significantly higher globulin, and lower albumin and calcium concentrations compared with nonimplanted animals (p-values < 0.05). Many of these changes were positively correlated with duration of implantation as well as the number of implants. Chronic bacterial infection was observed on the skin around many of the implant sites, and within deeper tissues. Representative histopathology around the implant site of two implanted animals revealed chronic suppurative to pyogranulomatous inflammation extending from the skin to the dura mater. X-ray fluorescence microscopy of tissue biopsies from the implant site of the same two animals revealed significant increases in free metal ions within the tissue, including titanium and iron. Free metal ions persisted in the tissues up to 6 months postexplant. These results suggest that long-term skull-anchored percutaneous titanium alloy implants results in localized inflammation, chronic infection, and leaching of metal ions into local tissues.

  16. Risk factors for stereotypic behavior and self-biting in rhesus macaques (Macaca mulatta): animal's history, current environment, and personality.

    Science.gov (United States)

    Gottlieb, Daniel H; Capitanio, John P; McCowan, Brenda

    2013-10-01

    Captive rhesus macaques sometimes exhibit undesirable abnormal behaviors, such as motor stereotypic behavior (MSB) and self-abuse. Many risk factors for these behaviors have been identified but the list is far from comprehensive, and large individual differences in rate of behavior expression remain. The goal of the current study was to determine which experiences predict expression of MSB and self-biting, and if individual differences in personality can account for additional variation in MSB expression. A risk factor analysis was performed utilizing data from over 4,000 rhesus monkeys at the California National Primate Research Center. Data were analyzed using model selection, with the best fitting models evaluated using Akaike Information Criterion. Results confirmed previous research that males exhibit more MSB and self-biting than females, MSB decreases with age, and indoor reared animals exhibit more MSB and self-biting than outdoor reared animals. Additionally, results indicated that animals exhibited less MSB and self-biting for each year spent outdoors; frequency of room moves and number of projects positively predicted MSB; pair separations positively predicted MSB and self-biting; pair housed animals expressed less MSB than single housed and grate paired animals; and that animals expressed more MSB and self-biting when in bottom rack cages, or cages near the room entrance. Based on these results we recommend limiting exposure to these risk factors when possible. Our results also demonstrated a relationship between personality and MSB expression, with animals low on gentle temperament, active in response to a human intruder, and high on novel object contact expressing more MSB. From these results we propose that an animal's MSB is related to its predisposition for an active personality, with active animals expressing higher rates of MSB.

  17. Real-Time Telemetric Monitoring in Whole-Body 60Co Gamma-Photon Irradiated Rhesus Macaques (Macaca mulatta)

    Science.gov (United States)

    2010-01-01

    anemia , and thrombocytopenia could occur. Moistened biscuits with fruit juice, fluids, and/or colloids would be provided. During days 14–25, the...logical features. In: The Laboratory Nonhuman Pri- mate. Boca Raton, FL: CRC Press, 2002. 11 Haigh MV, Paterson E: Effects of a single session of

  18. The use of the external layer of the calvaria's frontal bone to repair craniofacial skeleton injuries in Macaca mulatta (Rhesus

    Directory of Open Access Journals (Sweden)

    Camelo-Nunes José Mário

    2003-01-01

    Full Text Available PURPOSE: To study the integration of the external layer of the calvaria's frontal bone to repair craniofacial skeleton injuries in primates. METHODS: Ten Rhesus monkeys underwent surgery in two stages. In the first stage, four bone fragments were harvested from the external layer of the calvaria's frontal bone and were transplanted two on the calvaria's frontal bone and the other two onto the maxillary bone, by onlay and inlay. Seven weeks thereafter, four fragments were extracted from the transplantated area. The animals were not sacrificed. RESULTS: Macroscopic examination reveals bone regeneration, the areas onto which the bone fragments were transplantated having consequently increased in volume. The results of optical and electron microscopy is being carried out.

  19. Development of space perception in relation to the maturation of the motor system in infant rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Sclafani, Valentina; Simpson, Elizabeth A; Suomi, Stephen J; Ferrari, Pier Francesco

    2015-04-01

    To act on the environment, organisms must perceive object locations in relation to their body. Several neuroscientific studies provide evidence of neural circuits that selectively represent space within reach (i.e., peripersonal) and space outside of reach (i.e., extrapersonal). However, the developmental emergence of these space representations remains largely unexplored. We investigated the development of space coding in infant macaques and found that they exhibit different motor strategies and hand configurations depending on the objects' size and location. Reaching-grasping improved from 2 to 4 weeks of age, suggesting a broadly defined perceptual body schema at birth, modified by the acquisition and refinement of motor skills through early sensorimotor experience, enabling the development of a mature capacity for coding space.

  20. Gonadal and nongonadal mechanisms contribute to the prepubertal hiatus in gonadotropin secretion in the female rhesus monkey (Macaca mulatta).

    Science.gov (United States)

    Pohl, C R; deRidder, C M; Plant, T M

    1995-07-01

    The present study reexamined the role of the ovary in determining the prepubertal hiatus of gonadotropin secretion in the rhesus monkey. Day- and nighttime blood samples were obtained weekly from neonatally (7-10 days of age) ovariectomized and intact monkeys from birth until 3 yr of age. In the intact monkeys, plasma FSH levels increased during the first month of life, remained elevated until approximately 3 months of age, and then decreased to become undetectable by 7 months of age. Thereafter, plasma FSH remained undetectable until approximately 19 months of age, at which time it again increased to detectable concentrations. In animals ovariectomized as neonates, the developmental pattern in FSH secretion was similar to that in intact animals, but, quantitatively, mean plasma FSH concentrations in the agonadal females were greater than those in the intact control group at all times. Circulating daytime LH concentrations in intact animals were generally below the sensitivity of the assay during the neonatal and prepubertal phases of development, but after 27 months of age, this plasma hormone was measurable on occasion. In neonatally ovariectomized monkeys, daytime LH was elevated during the first month of life, undetectable between 2-20 months of age, and then rose into the adult range by the end of the study. Nocturnal plasma FSH and LH concentrations in agonadal monkeys were generally greater than those during the day at all stages of development. Of particular note was the finding that during the prepubertal hiatus in gonadotropin secretion, when daytime LH levels were mostly immeasurable, nighttime levels of this gonadotropin were consistently elevated. The hypersecretion of gonadotropin during prepubertal development in agonadal animals also occurred when ovariectomy was performed at 61-62 weeks of age. These findings demonstrate that in the female monkey, the open loop activity of the GnRH pulse generator during juvenile development is only partially suppressed, and the ovary contributes significantly to the prepubertal restraint on gonadotropin secretion. We also report the serendipitous finding that a precipitous, albeit transient, decline in circulating gonadotropin concentrations occurred in juvenile monkeys after separation from their mothers and relocation to individual cages. This suppression, which was accompanied by elevated plasma cortisol levels, was apparently not related to any impairment in growth.

  1. Risk factor analysis may provide clues to diarrhea prevention in outdoor-housed rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Prongay, Kamm; Park, Byung; Murphy, Stephanie J

    2013-08-01

    Seventy-five percent of rhesus macaques at national primate research centers are housed outside. Annually, 15-39% of these animals experience diarrhea and require veterinary treatment for dehydration, electrolyte imbalance, or weight loss. An estimated 21-33% of these patients will die or be euthanized. Many studies have explored the various infectious etiologies of non-human primate diarrhea. However, there is little published information on diarrhea incidence rates and risk factors in outdoor-housed rhesus macaques. Without this information, it is challenging to determine endemic and epidemic diarrhea levels, or to develop and evaluate mitigation strategies. Using electronic medical records, we conducted a retrospective cohort study to calculate diarrhea incidence rates for rhesus macaques (N = 3,181) housed in three different outdoor housing types (corrals, shelters, and temporary housing) at the Oregon National Primate Research Center between November 1, 2009 and October 31, 2010. With multiple logistic regression analysis, we determined the relative risk of housing type, sex, and age on development of diarrhea. Diarrhea incidence and mortality in our population was lower than many published ranges. Type of outdoor housing, age, and previous diarrhea episode were positively correlated with diarrhea risk. Younger animals in smaller shelters and temporary housing had a greater risk of acquiring diarrhea, with juvenile animals (0.7-3.9 years) having the highest mortality rate. Sex was not a risk factor, but adult females with diarrhea were more likely to develop life-threatening complications than adult males. We also constructed a predictive model for diarrhea-associated mortality using Classification and Regression Tree. Findings from this study will be used to develop and evaluate mitigation strategies in our outdoor-housed population and to provide a foundation for genetic susceptibility and immune function testing.

  2. Risk Factor Analysis May Provide Clues to Diarrhea Prevention in Outdoor-Housed Rhesus Macaques (Macaca mulatta)

    OpenAIRE

    PRONGAY, KAMM; Park, Byung; Murphy, Stephanie J.

    2013-01-01

    Seventy-five percent of rhesus macaques at national primate research centers are housed outside. Annually, 15–39% of these animals experience diarrhea and require veterinary treatment for dehydration, electrolyte imbalance, or weight loss. An estimated 21–33% of these patients will die or be euthanized. Many studies have explored the various infectious etiologies of non-human primate diarrhea. However, there is little published information on diarrhea incidence rates and risk factors in outdo...

  3. Pathogenic infection of Macaca nemestrina with a CCR5-tropic subtype-C simian-human immunodeficiency virus

    Directory of Open Access Journals (Sweden)

    Song Ruijiang

    2009-07-01

    Full Text Available Abstract Background Although pig-tailed macaques (Macaca nemestrina have been used in AIDS research for years, less is known about the early immunopathogenic events in this species, as compared to rhesus macaques (Macaca mulatta. Similarly, the events in early infection are well-characterized for simian immunodeficiency viruses (SIV, but less so for chimeric simian-human immunodeficiency viruses (SHIV, although the latter have been widely used in HIV vaccine studies. Here, we report the consequences of intrarectal infection with a CCR5-tropic clade C SHIV-1157ipd3N4 in pig-tailed macaques. Results Plasma and cell-associated virus was detectable in peripheral blood and intestinal tissues of all four pig-tailed macaques following intrarectal inoculation with SHIV-1157ipd3N4. We also observed a rapid and irreversible loss of CD4+ T cells at multiple mucosal sites, resulting in a marked decrease of CD4:CD8 T cell ratios 0.5–4 weeks after inoculation. This depletion targeted subsets of CD4+ T cells expressing the CCR5 coreceptor and having a CD28-CD95+ effector memory phenotype, consistent with the R5-tropism of SHIV-1157ipd3N4. All three animals that were studied beyond the acute phase seroconverted as early as week 4, with two developing cross-clade neutralizing antibody responses by week 24. These two animals also demonstrated persistent plasma viremia for >48 weeks. One of these animals developed AIDS, as shown by peripheral blood CD4+ T-cell depletion starting at 20 weeks post inoculation. Conclusion These findings indicate that SHIV-1157ipd3N4-induced pathogenesis in pig-tailed macaques followed a similar course as SIV-infected rhesus macaques. Thus, R5 SHIV-C-infection of pig-tailed macaques could provide a useful and relevant model for AIDS vaccine and pathogenesis research.

  4. NCBI nr-aa BLAST: CBRC-OGAR-01-1046 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-OGAR-01-1046 ref|NP_001036238.2| chemokine (C-C motif) receptor 5 [Macaca mula...AC51158.1| CC chemokine receptor 5 [Macaca mulatta] gb|AAC51109.1| CC chemokine receptor 5 [Macaca mulatta] ...nemestrina] gb|AAB62556.1| CC chemokine receptor-5 [Macaca mulatta] gb|AAQ22367.1...| CC chemokine receptor 5 [Macaca nemestrina] gb|ABF71557.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71...558.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71559.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71

  5. NCBI nr-aa BLAST: CBRC-RMAC-02-0028 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-RMAC-02-0028 ref|NP_001036238.2| chemokine (C-C motif) receptor 5 [Macaca mula...AC51158.1| CC chemokine receptor 5 [Macaca mulatta] gb|AAC51109.1| CC chemokine receptor 5 [Macaca mulatta] ...nemestrina] gb|AAB62556.1| CC chemokine receptor-5 [Macaca mulatta] gb|AAQ22367.1...| CC chemokine receptor 5 [Macaca nemestrina] gb|ABF71557.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71...558.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71559.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71

  6. NCBI nr-aa BLAST: CBRC-CFAM-20-0020 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-CFAM-20-0020 ref|NP_001036238.2| chemokine (C-C motif) receptor 5 [Macaca mula...AC51158.1| CC chemokine receptor 5 [Macaca mulatta] gb|AAC51109.1| CC chemokine receptor 5 [Macaca mulatta] ...nemestrina] gb|AAB62556.1| CC chemokine receptor-5 [Macaca mulatta] gb|AAQ22367.1...| CC chemokine receptor 5 [Macaca nemestrina] gb|ABF71557.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71...558.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71559.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71

  7. Evidence of inbreeding depression on human height.

    Directory of Open Access Journals (Sweden)

    Ruth McQuillan

    Full Text Available Stature is a classical and highly heritable complex trait, with 80%-90% of variation explained by genetic factors. In recent years, genome-wide association studies (GWAS have successfully identified many common additive variants influencing human height; however, little attention has been given to the potential role of recessive genetic effects. Here, we investigated genome-wide recessive effects by an analysis of inbreeding depression on adult height in over 35,000 people from 21 different population samples. We found a highly significant inverse association between height and genome-wide homozygosity, equivalent to a height reduction of up to 3 cm in the offspring of first cousins compared with the offspring of unrelated individuals, an effect which remained after controlling for the effects of socio-economic status, an important confounder (χ(2 = 83.89, df = 1; p = 5.2 × 10(-20. There was, however, a high degree of heterogeneity among populations: whereas the direction of the effect was consistent across most population samples, the effect size differed significantly among populations. It is likely that this reflects true biological heterogeneity: whether or not an effect can be observed will depend on both the variance in homozygosity in the population and the chance inheritance of individual recessive genotypes. These results predict that multiple, rare, recessive variants influence human height. Although this exploratory work focuses on height alone, the methodology developed is generally applicable to heritable quantitative traits (QT, paving the way for an investigation into inbreeding effects, and therefore genetic architecture, on a range of QT of biomedical importance.

  8. Two-locus inbreeding measures for recurrent selection.

    Science.gov (United States)

    Choy, S C; Weir, B S

    1977-03-01

    For a population undergoing recurrent selection, a method is presented for determining the average inbreeding coefficients at the end of each breeding cycle. The coefficients are derived in terms of probability measures that genes are identical by descent. For the one-locus case, two digametic measures are defined and employed in the derivation of a recurrence formula for the inbreeding coefficient. Two further classes of measures, trigametic and quadrigametic, are required for transition from one cycle to the previous one to allow the calculation of the inbreeding function for the two-locus case. Numerical values of the average probability of double identity by descent for populations with various imposed assumptions are listed to illustrate the effects of linkage and population size on the accrual of inbreeding and hence of homozygosity.

  9. Inbreeding depression is purged in the invasive insect Harmonia axyridis.

    Science.gov (United States)

    Facon, Benoît; Hufbauer, Ruth A; Tayeh, Ashraf; Loiseau, Anne; Lombaert, Eric; Vitalis, Renaud; Guillemaud, Thomas; Lundgren, Jonathan G; Estoup, Arnaud

    2011-03-08

    Bottlenecks in population size reduce genetic diversity and increase inbreeding, which can lead to inbreeding depression. It is thus puzzling how introduced species, which typically pass through bottlenecks, become such successful invaders. However, under certain theoretical conditions, bottlenecks of intermediate size can actually purge the alleles that cause inbreeding depression. Although this process has been confirmed in model laboratory systems, it has yet to be observed in natural invasive populations. We evaluate whether such purging could facilitate biological invasions by using the world-wide invasion of the ladybird (or ladybug) Harmonia axyridis. We first show that invasive populations endured a bottleneck of intermediate intensity. We then demonstrate that replicate introduced populations experience almost none of the inbreeding depression suffered by native populations. Thus, rather than posing a barrier to invasion as often assumed, bottlenecks, by purging deleterious alleles, can enable the evolution of invaders that maintain high fitness even when inbred. Copyright © 2011 Elsevier Ltd. All rights reserved.

  10. Analysis of genetic diversity and estimation of inbreeding coefficient ...

    African Journals Online (AJOL)

    Analysis of genetic diversity and estimation of inbreeding coefficient within ... The present work is a contribution to the knowledge of population structure and to the ... diversity that may be helpful to horse breeders in designing and managing ...

  11. A Genetic Interpretation of the Variation in Inbreeding Depression

    OpenAIRE

    2005-01-01

    Inbreeding depression is expected to play an important but complicated role in evolution. If we are to understand the evolution of inbreeding depression (i.e., purging), we need quantitative genetic interpretations of its variation. We introduce an experimental design in which sires are mated to multiple dams, some of which are unrelated to the sire but others are genetically related owing to an arbitrary number of prior generations of selfing or sib-mating. In this way we introduce the conce...

  12. Genomic Inbreeding and Relatedness in Wild Panda Populations.

    Science.gov (United States)

    Garbe, John R; Prakapenka, Dzianis; Tan, Cheng; Da, Yang

    2016-01-01

    Inbreeding and relatedness in wild panda populations are important parameters for panda conservation. Habitat loss and fragmentation are expected to increase inbreeding but the actual inbreeding levels in natural panda habitats were unknown. Using 150,025 SNPs and 14,926 SNPs selected from published whole-genome sequences, we estimated genomic inbreeding coefficients and relatedness of 49 pandas including 34 wild pandas sampled from six habitats. Qinling and Liangshan pandas had the highest levels of inbreeding and relatedness measured by genomic inbreeding and coancestry coefficients, whereas the inbreeding levels in Qionglai and Minshan were 28-45% of those in Qinling and Liangshan. Genomic coancestry coefficients between pandas from different habitats showed that panda populations from the four largest habitats, Minshan, Qionglai, Qinling and Liangshan, were genetically unrelated. Pandas between these four habitats on average shared 66.0-69.1% common alleles and 45.6-48.6% common genotypes, whereas pandas within each habitat shared 71.8-77.0% common alleles and 51.7-60.4% common genotypes. Pandas in the smaller populations of Qinling and Liangshan were more similarly to each other than pandas in the larger populations of Qionglai and Minshan according to three genomic similarity measures. Panda genetic differentiation between these habitats was positively related to their geographical distances. Most pandas separated by 200 kilometers or more shared no common ancestral alleles. The results provided a genomic quantification of the actual levels of inbreeding and relatedness among pandas in their natural habitats, provided genomic confirmation of the relationship between genetic diversity and geographical distances, and provided genomic evidence to the urgency of habitat protection.

  13. Pathological findings and diagnostic implications of a rhesus macaque (Macacca mulatta) model of aerosol exposure to Burkholderia mallei (glanders).

    Science.gov (United States)

    Yingst, Samuel L; Facemire, Paul; Chuvala, Lara; Norwood, David; Wolcott, Mark; Huzella, Louis

    2015-06-01

    Burkholderia mallei is a Gram-negative bacillus that causes a pneumonic disease known as glanders in equids and humans, and a lymphatic infection known as farcy, primarily in equids. With the potential to infect humans by the respiratory route, aerosol exposure can result in severe, occasionally fatal, pneumonia. Today, glanders infections in humans are rare, likely due to less frequent contact with infected equids than in the past. Acutely ill humans often have non-specific clinical signs and in order to diagnose cases, especially in scenarios of multiple cases in an unexpected setting, rapid diagnostics for B. mallei may be critical. The pathogenesis of acute glanders in the rhesus macaque (Macaca mulatta) was studied as an initial effort to improve diagnostic methods. In the study described here, the diagnostic techniques of PCR, culture and histopathology were compared. The results indicated that PCR may provide rapid, non-invasive diagnosis of glanders in some cases. As expected, PCR results were positive in lung tissue in 11/12 acutely infected rhesus macaques, but more importantly in terms of diagnostic algorithm development, PCR results were frequently positive in non-invasive samples such as broncho-alveolar lavage or nasal swabs (7/12) and occasionally in blood (3/12). However, conventional bacterial culture failed to recover bacteria in many of these samples. The study showed that the clinical presentation of aerosol-exposed rhesus macaques is similar to descriptions of human glanders and that PCR has potential for rapid diagnosis of outbreaks, if not individual cases.

  14. MaqFACS (Macaque Facial Action Coding System) can be used to document facial movements in Barbary macaques (Macaca sylvanus).

    Science.gov (United States)

    Julle-Danière, Églantine; Micheletta, Jérôme; Whitehouse, Jamie; Joly, Marine; Gass, Carolin; Burrows, Anne M; Waller, Bridget M

    2015-01-01

    Human and non-human primates exhibit facial movements or displays to communicate with one another. The evolution of form and function of those displays could be better understood through multispecies comparisons. Anatomically based coding systems (Facial Action Coding Systems: FACS) are developed to enable such comparisons because they are standardized and systematic and aid identification of homologous expressions underpinned by similar muscle contractions. To date, FACS has been developed for humans, and subsequently modified for chimpanzees, rhesus macaques, orangutans, hylobatids, dogs, and cats. Here, we wanted to test whether the MaqFACS system developed in rhesus macaques (Macaca mulatta) could be used to code facial movements in Barbary macaques (M. sylvanus), a species phylogenetically close to the rhesus macaques. The findings show that the facial movement capacity of Barbary macaques can be reliably coded using the MaqFACS. We found differences in use and form of some movements, most likely due to specializations in the communicative repertoire of each species, rather than morphological differences.

  15. Complete Taiwanese Macaque (Macaca cyclopis) Mitochondrial Genome: Reference-Assisted de novo Assembly with Multiple k-mer Strategy.

    Science.gov (United States)

    Huang, Yu-Feng; Midha, Mohit; Chen, Tzu-Han; Wang, Yu-Tai; Smith, David Glenn; Pei, Kurtis Jai-Chyi; Chiu, Kuo Ping

    2015-01-01

    The Taiwanese (Formosan) macaque (Macaca cyclopis) is the only nonhuman primate endemic to Taiwan. This primate species is valuable for evolutionary studies and as subjects in medical research. However, only partial fragments of the mitochondrial genome (mitogenome) of this primate species have been sequenced, not mentioning its nuclear genome. We employed next-generation sequencing to generate 2 x 90 bp paired-end reads, followed by reference-assisted de novo assembly with multiple k-mer strategy to characterize the M. cyclopis mitogenome. We compared the assembled mitogenome with that of other macaque species for phylogenetic analysis. Our results show that, the M. cyclopis mitogenome consists of 16,563 nucleotides encoding for 13 protein-coding genes, 2 ribosomal RNAs and 22 transfer RNAs. Phylogenetic analysis indicates that M. cyclopis is most closely related to M. mulatta lasiota (Chinese rhesus macaque), supporting the notion of Asia-continental origin of M. cyclopis proposed in previous studies based on partial mitochondrial sequences. Our work presents a novel approach for assembling a mitogenome that utilizes the capabilities of de novo genome assembly with assistance of a reference genome. The availability of the complete Taiwanese macaque mitogenome will facilitate the study of primate evolution and the characterization of genetic variations for the potential usage of this species as a non-human primate model for medical research.

  16. Consanguineous marriages and endemic malaria: can inbreeding increase population fitness?

    Directory of Open Access Journals (Sweden)

    Nagelkerke Nicolas

    2008-08-01

    Full Text Available Abstract Background The practice of consanguineous marriages is widespread in countries with endemic malaria. In these regions, consanguinity increases the prevalence of α+-thalassemia, which is protective against malaria. However, it also causes an excessive mortality amongst the offspring due to an increase in homozygosis of recessive lethal alleles. The aim of this study was to explore the overall effects of inbreeding on the fitness of a population infested with malaria. Methods In a stochastic computer model of population growth, the sizes of inbred and outbred populations were compared. The model has been previously validated producing results for inbred populations that have agreed with analytical predictions. Survival likelihoods for different α+-thalassemia genotypes were obtained from the odds of severe forms of disease from a field study. Survivals were further estimated for different values of mortality from malaria. Results Inbreeding increases the frequency of α+-thalassemia allele and the loss of life due to homozygosis of recessive lethal alleles; both are proportional to the coefficient of inbreeding and the frequency of alleles in population. Inbreeding-mediated decrease in mortality from malaria (produced via enhanced α+-thalassemia frequency mitigates inbreeding-related increases in fatality (produced via increased homozygosity of recessive lethals. When the death rate due to malaria is high, the net effect of inbreeding is a reduction in the overall mortality of the population. Conclusion Consanguineous marriages may increase the overall fitness of populations with endemic malaria.

  17. Experimental evidence that high levels of inbreeding depress sperm competitiveness.

    Science.gov (United States)

    Zajitschek, S R K; Lindholm, A K; Evans, J P; Brooks, R C

    2009-06-01

    The effects of inbreeding on sperm quantity and quality are among the most dramatic examples of inbreeding depression. The extent to which inbreeding depression results in decreased fertilization success of a male's sperm, however, remains largely unknown. This task is made more difficult by the fact that other factors, such as cryptic female choice, male sperm allocation and mating order, can also drive patterns of paternity. Here, we use artificial insemination to eliminate these extraneous sources of variation and to measure the effects of inbreeding on the competitiveness of a male's sperm. We simultaneously inseminated female guppies (Poecilia reticulata) with equal amounts of sperm from an outbred (f = 0) male and either a highly (f = 0.59) or a moderately inbred (f = 0.25) male. Highly inbred males sired significantly fewer offspring than outbred males, but share of paternity did not differ between moderately inbred and outbred males. These findings therefore confirm that severe inbreeding can impair the competitiveness of sperm, but suggest that in the focal population inbreeding at order of a brother-sister mating does not reduce a male's sperm competitiveness.

  18. Inbreeding on productive and reproductive traits of dairy Gyr cattle

    Directory of Open Access Journals (Sweden)

    João Cruz Reis Filho

    2015-05-01

    Full Text Available The objective of this study was to estimate genetic parameters and to evaluate the effects of inbreeding on productive and reproductive traits of dairy Gyr cattle. Single-trait animal models were used to estimate genetic parameters and solutions for inbreeding coefficients for milk (milk 305-d, fat (fat 305-d, protein (protein 305-d, lactose (lactose 305-d, and total solids (TS 305-d yield up to 305 days of lactation, days in milk (DIM, age at first calving (AFC and calving intervals (CI. The mean inbreeding coefficient was 2.82%. The models with linear and quadratic effects of inbreeding coefficients fitted the data better than the models without or with only linear effect of inbreeding coefficient for all traits. The increase in inbreeding coefficient caused several losses in productive and reproductive traits of dairy Gyr cattle. Estimates of heritability for milk 305-d, fat 305-d, protein 305-d, lactose 305-d, TS 305-d, DIM, AFC, and CI were 0.28, 0.27, 0.22, 0.21, 0.22, 0.17, 0.20, and 0.10, respectively. It is possible to achieve genetic progress in productive traits (especially in milk 305-d and fat 305-d and age at first calving in dairy Gyr cattle through selection.

  19. Evidence for inbreeding depression and pre-copulatory, but not post copulatory inbreeding avoidance in the cabbage beetle Colaphellus bowringi.

    Directory of Open Access Journals (Sweden)

    XingPing Liu

    Full Text Available Inbreeding is known to have adverse effects on fitness-related traits in a range of insect species. A series of theoretical and experimental studies have suggested that polyandrous insects could avoid the cost of inbreeding via pre-copulatory mate choice and/or post-copulatory mechanisms. We looked for evidence of pre-copulatory inbreeding avoidance using female mate preference trials, in which females were given the choice of mating with either of two males, a sibling and a non-sibling. We also tested for evidence of post-copulatory inbreeding avoidance by conducting double mating experiments, in which four sibling females were mated with two males sequentially, either two siblings, two non-siblings or a sibling and a non-sibling in either order. We identified substantial inbreeding depression: offspring of females mated to full siblings had lower hatching success, slower development time from egg to adult, lower survival of larval and pupal stages, and lower adult body mass than the offspring of females mated to non-sibling males. We also found evidence of pre-copulatory inbreeding avoidance, as females preferred to mate with non-sibling males. However, we did not find any evidence of post-copulatory inbreeding avoidance: egg hatching success of females mating to both sibling and non-sibling males were consistent with sperm being used without bias in relation to mate relatedness. Our results suggest that this cabbage beetle has evolved a pre-copulatory mechanism to avoid matings between close relative, but that polyandry is apparently not an inbreeding avoidance mechanism in C. bowringi.

  20. Inbreeding avoidance in spiders: evidence for rescue effect in fecundity of female spiders with outbreeding opportunity

    DEFF Research Database (Denmark)

    Bilde, T.; Maklakov, A.A.; Schilling, Nadia

    2007-01-01

    avoidance can be because of low risk of inbreeding, variation in tolerance to inbreeding or high costs of outbreeding. We examined the relationship between inbreeding depression and inbreeding avoidance adaptations under two levels of inbreeding in the spider Oedothorax apicatus, asking whether preference...... for unrelated sperm via pre- and/or post-copulatory mechanisms could restore female fitness when inbreeding depression increases. Using inbred isofemale lines we provided female spiders with one or two male spiders of different relatedness in five combinations: one male sib; one male nonsib; two male sibs; two...

  1. Pedigree error due to extra-pair reproduction substantially biases estimates of inbreeding depression.

    Science.gov (United States)

    Reid, Jane M; Keller, Lukas F; Marr, Amy B; Nietlisbach, Pirmin; Sardell, Rebecca J; Arcese, Peter

    2014-03-01

    Understanding the evolutionary dynamics of inbreeding and inbreeding depression requires unbiased estimation of inbreeding depression across diverse mating systems. However, studies estimating inbreeding depression often measure inbreeding with error, for example, based on pedigree data derived from observed parental behavior that ignore paternity error stemming from multiple mating. Such paternity error causes error in estimated coefficients of inbreeding (f) and reproductive success and could bias estimates of inbreeding depression. We used complete "apparent" pedigree data compiled from observed parental behavior and analogous "actual" pedigree data comprising genetic parentage to quantify effects of paternity error stemming from extra-pair reproduction on estimates of f, reproductive success, and inbreeding depression in free-living song sparrows (Melospiza melodia). Paternity error caused widespread error in estimates of f and male reproductive success, causing inbreeding depression in male and female annual and lifetime reproductive success and juvenile male survival to be substantially underestimated. Conversely, inbreeding depression in adult male survival tended to be overestimated when paternity error was ignored. Pedigree error stemming from extra-pair reproduction therefore caused substantial and divergent bias in estimates of inbreeding depression that could bias tests of evolutionary theories regarding inbreeding and inbreeding depression and their links to variation in mating system. © 2013 The Author(s). Evolution © 2013 The Society for the Study of Evolution.

  2. Outbreeding effects in an inbreeding insect, Cimex lectularius.

    Science.gov (United States)

    Fountain, Toby; Butlin, Roger K; Reinhardt, Klaus; Otti, Oliver

    2015-01-01

    In some species, populations with few founding individuals can be resilient to extreme inbreeding. Inbreeding seems to be the norm in the common bed bug, Cimex lectularius, a flightless insect that, nevertheless, can reach large deme sizes and persist successfully. However, bed bugs can also be dispersed passively by humans, exposing inbred populations to gene flow from genetically distant populations. The introduction of genetic variation through this outbreeding could lead to increased fitness (heterosis) or be costly by causing a loss of local adaptation or exposing genetic incompatibility between populations (outbreeding depression). Here, we addressed how inbreeding within demes and outbreeding between distant populations impact fitness over two generations in this re-emerging public health pest. We compared fitness traits of families that were inbred (mimicking reproduction following a founder event) or outbred (mimicking reproduction following a gene flow event). We found that outbreeding led to increased starvation resistance compared to inbred families, but this benefit was lost after two generations of outbreeding. No other fitness benefits of outbreeding were observed in either generation, including no differences in fecundity between the two treatments. Resilience to inbreeding is likely to result from the history of small founder events in the bed bug. Outbreeding benefits may only be detectable under stress and when heterozygosity is maximized without disruption of coadaptation. We discuss the consequences of these results both in terms of inbreeding and outbreeding in populations with genetic and spatial structuring, as well as for the recent resurgence of bed bug populations.

  3. Proteomic Characterization of Inbreeding-Related Cold Sensitivity in Drosophila melanogaster

    DEFF Research Database (Denmark)

    Vermeulen, C.J.; Pedersen, Kamilla Sofie; Beck, Hans C.

    2013-01-01

    insight into the molecular interplay between intrinsic stress responses, inbreeding depression and temperature tolerance, we performed a proteomic characterization of a well-defined conditional inbreeding effect in a single line of Drosophila melanogaster, which suffers from extreme cold sensitivity...

  4. Inbreeding avoidance through non-random mating in sticklebacks.

    Science.gov (United States)

    Frommen, Joachim G; Bakker, Theo C M

    2006-06-22

    Negative effects of inbreeding are well documented in a wide range of animal taxa. Hatching success and survival of inbred offspring is reduced in many species and inbred progeny are often less attractive to potential mates. Thus, individuals should avoid mating with close kin. However, experimental evidence for inbreeding avoidance through non-random mating in vertebrates is scarce. Here, we show that gravid female three-spined sticklebacks (Gasterosteus aculeatus) when given the choice between a courting familiar brother and a courting unfamiliar non-sib prefer to mate with the non-sib and thus avoid the disadvantages of incest. We controlled for differences in males' body size and red intensity of nuptial coloration. Thus, females adjust their courting behaviour to the risk of inbreeding.

  5. Matrimonial distance, inbreeding coefficient and population size: Dhangar data.

    Science.gov (United States)

    Majumder, P P; Malhotra, K C

    1979-01-01

    Data on the distance between the birthplaces of spouses (matrimonial distance) were collected from 2,260 married individuals belonging to 21 endogamous castes of the Dhangar (shepherd) cast-cluster of Maharashtra, India. The general form of the distribution of matrimonial distances is one which is extremely positively skewed and leptokurtic. The percentage of intra-village marriages generally decreases from the southern areas of Maharashtra to the northern areas of the state, as does the inbreeding coefficient. This situation is in conformity with the socio-cultural norms regulating matrimonial choice in south and north India. An attempt has been made to relate the degree of inbreeding to the mean matrimonial distance and population size. The mean matrimonial distance is more useful in predicting the degree of inbreeding than population size.

  6. Inbreeding rate and genetic structure of cat populations in Poland.

    Science.gov (United States)

    Mucha, S; Wolc, A; Gradowska, A; Szwaczkowski, T

    2011-02-01

    The objective of the study was to analyze effective population size and inbreeding level in populations of cat breeds registered in the Polish Studbook. The Association of Purebred Cat Breeders in Poland provided access to pedigrees of 26725 cats from seven breeds. The most frequent breed was Persian, however increasing tendency in numbers of registered animals from other breeds was recorded in later years. Although the percentage of inbred individuals was increasing over time, mating of close relatives was avoided by most of the breeders, and the average inbreeding coefficient exceeded 5% only for Siberian and Russian breeds. Current analysis suggests that the Polish pedigree cat populations are not threatened by negative effects of inbreeding.

  7. ARTICLE - Inbreeding depression in castor bean (Ricinus communis L. progenies

    Directory of Open Access Journals (Sweden)

    Milton Krieger

    2012-12-01

    Full Text Available The purpose of this study was to investigate inbreeding depression (DE in castor bean. From a population derived from the Guarani cultivar, 60 mother plants were sampled. Three types of progenies were obtained from each one: from self-pollination (AU, from crosses (CR and from open pollination (PL. Grain yield of the progenies was evaluated in two locations. There was a strong interaction of progenies x locations, which led to obtaining estimates within each location. Broad variation was observed in inbreeding depression, with mean values of 6.7% and 13.4%, comparing AU progenies with PL progenies. It was observed that the population has high potential for selecting promising inbred lines. The frequency of mother plants generating progenies with simultaneous high general combination capacity and low inbreeding depression was low. Recurrent selection will increase the occurrence of parent plants associating these two properties, which is necessary for obtaining superior synthetic varieties.

  8. When does female multiple mating evolve to adjust inbreeding? Effects of inbreeding depression, direct costs, mating constraints, and polyandry as a threshold trait.

    Science.gov (United States)

    Duthie, A Bradley; Bocedi, Greta; Reid, Jane M

    2016-09-01

    Polyandry is often hypothesized to evolve to allow females to adjust the degree to which they inbreed. Multiple factors might affect such evolution, including inbreeding depression, direct costs, constraints on male availability, and the nature of polyandry as a threshold trait. Complex models are required to evaluate when evolution of polyandry to adjust inbreeding is predicted to arise. We used a genetically explicit individual-based model to track the joint evolution of inbreeding strategy and polyandry defined as a polygenic threshold trait. Evolution of polyandry to avoid inbreeding only occurred given strong inbreeding depression, low direct costs, and severe restrictions on initial versus additional male availability. Evolution of polyandry to prefer inbreeding only occurred given zero inbreeding depression and direct costs, and given similarly severe restrictions on male availability. However, due to its threshold nature, phenotypic polyandry was frequently expressed even when strongly selected against and hence maladaptive. Further, the degree to which females adjusted inbreeding through polyandry was typically very small, and often reflected constraints on male availability rather than adaptive reproductive strategy. Evolution of polyandry solely to adjust inbreeding might consequently be highly restricted in nature, and such evolution cannot necessarily be directly inferred from observed magnitudes of inbreeding adjustment. © 2016 The Author(s). Evolution published by Wiley Periodicals, Inc. on behalf of The Society for the Study of Evolution.

  9. Inbreeding in Mimulus guttatus reduces visitation by bumble bee pollinators.

    Directory of Open Access Journals (Sweden)

    David E Carr

    Full Text Available Inbreeding in plants typically reduces individual fitness but may also alter ecological interactions. This study examined the effect of inbreeding in the mixed-mating annual Mimulus guttatus on visitation by pollinators (Bombus impatiens in greenhouse experiments. Previous studies of M. guttatus have shown that inbreeding reduced corolla size, flower number, and pollen quantity and quality. Using controlled crosses, we produced inbred and outbred families from three different M. guttatus populations. We recorded the plant genotypes that bees visited and the number of flowers probed per visit. In our first experiment, bees were 31% more likely to visit outbred plants than those selfed for one generation and 43% more likely to visit outbred plants than those selfed for two generations. Inbreeding had only a small effect on the number of flowers probed once bees arrived at a genotype. These differences were explained partially by differences in mean floral display and mean flower size, but even when these variables were controlled statistically, the effect of inbreeding remained large and significant. In a second experiment we quantified pollen viability from inbred and self plants. Bees were 37-54% more likely to visit outbred plants, depending on the population, even when controlling for floral display size. Pollen viability proved to be as important as floral display in predicting pollinator visitation in one population, but the overall explanatory power of a multiple regression model was weak. Our data suggested that bees use cues in addition to display size, flower size, and pollen reward quality in their discrimination of inbred plants. Discrimination against inbred plants could have effects on plant fitness and thereby reinforce selection for outcrossing. Inbreeding in plant populations could also reduce resource quality for pollinators, potentially resulting in negative effects on pollinator populations.

  10. Assessment of inbreeding depression in Nellore cows (Bos indicus) through high-density SNP genotypes

    Science.gov (United States)

    Inbreeding has been incriminated as a cause of decrease in reproductive performance in cattle. This negative correlation is known as ‘inbreeding depression’, and evidence supporting this hypothesis was generated from association studies between reproductive traits and estimates of inbreeding coeffic...

  11. Effect of inbreeding on the incidence of retained placenta in Friesian horses

    NARCIS (Netherlands)

    Sevinga, M.; Vrijenhoek, T.; Hesselink, J.W.; Barkema, H.W.; Groen, A.F.

    2004-01-01

    This study was motivated by the hypothesis that the incidence of retained placenta (RP) in Friesian horses is associated with inbreeding. The objectives were to 1) calculate the inbreeding rate in the total registered Friesian horse population; 2) study the association of the inbreeding coefficient

  12. Sibling competition does not exacerbate inbreeding depression in the burying beetle Nicrophorus vespilloides.

    Science.gov (United States)

    Pilakouta, N; Sieber, D J; Smiseth, P T

    2016-04-01

    Inbreeding results from matings between relatives and can cause a reduction in offspring fitness, known as inbreeding depression. Previous work has shown that a wide range of environmental stresses, such as extreme temperatures, starvation and parasitism, can exacerbate inbreeding depression. It has recently been argued that stresses due to intraspecific competition should have a stronger effect on the severity of inbreeding depression than stresses due to harsh physical conditions. Here, we tested whether an increase in the intensity of sibling competition can exacerbate inbreeding depression in the burying beetle Nicrophorus vespilloides. We used a 2 × 3 factorial design with offspring inbreeding status (outbred or inbred) and brood size (5, 20, or 40 larvae) as the two factors. We found a main effect of inbreeding status, as inbred larvae had lower survival than outbred larvae, and a main effect of brood size, as larvae in large broods had lower survival and mass than larvae in medium-sized broods. However, there was no effect of the interaction between inbreeding status and brood size, suggesting that sibling competition did not influence the severity of inbreeding depression. Since we focused on sibling competition within homogeneous broods of either inbred or outbred larvae, we cannot rule out possible effects of sibling competition on inbreeding depression in mixed paternity broods comprising of both inbred and outbred offspring. More information on whether and when sibling competition might influence inbreeding depression can help advance our understanding of the causes underlying variation in the severity of inbreeding depression.

  13. Inbreeding affects locomotor activity in Drosophila melanogaster at different ages

    DEFF Research Database (Denmark)

    Manenti, Tommaso; Pertoldi, Cino; Nasiri Moghadam, Neda

    2015-01-01

    The ability to move is essential for many behavioural traits closely related to fitness. Here we studied the effect of inbreeding on locomotor activity (LA) of Drosophila melanogaster at different ages under both dark and light regimes. We expected to find a decreased LA in inbred lines compared...... LA than control lines. Moreover, age per se did not affect LA neither in control nor in inbred lines, while we found a strong line by age interaction between inbred lines. Interestingly, inbreeding changed the daily activity pattern of the flies: these patterns were consistent across all control...

  14. 太行山猕猴研究进展与展望%Research Advances and Prospects for Macaca mualatta tcheliensis in the Taihangshan Mountains Area, China

    Institute of Scientific and Technical Information of China (English)

    路纪琪; 王好峰; 谢东明

    2009-01-01

    Rhesus macaques are found ubiquitously throughout Asia, from Afghanistan to India and Thailand to southern China. They are used for an extraordinary range of biomedical and basic research. Due to their close genetic, physiologic, and metabolic similarity to humans, this species serves as an essential research tool in neuroscience, behavioral biology, reproductive physiology, neuroendocrinology, endocrinology, cardiovascular studies, pharmacology, and many other areas. Macaca mulatta tcheliensis, an endemic subspecies of rhesus macaque to China, are distributed mainly in the southern parts of the Taihangshan and Zhongtiaoshan Mountains area which was the northernmost range of rhesus macaque. These macaques, referred to as the Taihangshan macaque, live in secondary deciduous forests at elevations between 300 m and 1200 m (984 ft and 3937 ft) with a temperate climate and cold, snowy winters similar to the climate of the central, midwestern United States. Rhesus macaque are categorized into Grade II in the list Chinese Key protected animal species. Since early the 1980s, researchers had conducted some works on its population and distribution, morphology (including general morphology and skeleton morphology), ecology, microbiology, diseases, and other fields. In this article, we summarized those published works, and outlined further research needs to be done in the future. We aim to promote effective and long-term conservation on Taihangshan macaques.%猕猴广泛分布于从阿富汗到泰国和中国南部的亚洲地区.分布于中国的猕猴有6个亚种.太行山猕猴为猕猴华北亚种Macaca mulatta tcheliensis,系中国所特有,目前仅分布于河南、山西两省交界的太行山和中条山南端地区,为世界野生猕猴分布最北的种群.自20世纪80年代初期开始,学者们在数量与分布、形态学(包括普通形态学、骨骼系统形态学)、生态学、微观生物学、疾病、实验技术等方面,对太行山猕猴展开了

  15. Inbreeding avoidance in an isolated indigenous Zapotec community in the valley of Oaxaca, southern Mexico.

    Science.gov (United States)

    Little, Bertis B; Malina, Robert M

    2005-06-01

    We analyzed inbreeding using surname isonymy in an indigenous genetic isolate. The subjects were residents of a rural Zapotec-speaking community in the valley of Oaxaca, southern Mexico. The community can be classified as a genetic isolate with an average gene flow of culturally traditional patronym-matronym naming. Estimation of inbreeding from surname isonymy is facilitated by the traditional patronym-matronym name assignment among indigenous Mexican populations. A total of 2,149 individuals had valid surname patronym-matronym pairings, including 484 deceased ancestors. Surname isonymy analysis methods were used to estimate total inbreeding and to segregate it into random and nonrandom components. The surname isonymy coefficient computed from 119 isonymous surname pairings (119/2,149) was 0.0554. The estimated inbreeding coefficient from surname isonymy was 0.0138 (0.0554/4). The random and nonrandom components of inbreeding were F(r) = 0.0221 and F(n) = -0.0091, respectively. The results suggest that consanguinity is culturally avoided. Nonrandom inbreeding decreased total inbreeding by about 41%. Total estimated inbreeding by surname isonymy was 0.0138, which is similar to inbreeding estimated from a sample of pedigrees, 0.01. Socially prescribed inbreeding avoidance substantially lowered total F through negative nonrandom inbreeding. Even in the situation of genetic isolation and small effective population size (N(e)), estimated inbreeding is lower than may have otherwise occurred if inbreeding were only random. However, among the poorest individuals, socially prescribed jural rules for inbreeding avoidance failed to operate. Thus the preponderance of inbreeding appears to occur among the poor, economically disadvantaged in the community.

  16. When dispersal fails: unexpected genetic separation in Gibraltar macaques (Macaca sylvanus).

    Science.gov (United States)

    Modolo, Lara; Martin, Robert D; van Schaik, Carel P; van Noordwijk, Maria A; Krũtzen, Michael

    2008-09-01

    Barbary macaques (Macaca sylvanus), now restricted in the wild to a few isolated forested areas of Morocco and Algeria, are present in a free-ranging colony on Gibraltar. For many decades, the Gibraltar colony was exposed to multiple bottlenecks due to highly nonrandom removal of animals, followed by repeated introductions of animals from North Africa. Moreover, because of complete isolation, Gibraltar's several social groups of macaques provide an ideal system to study the genetic consequences of dispersal in cercopithecines in situ. Predictions of genetic consequences due to male-biased dispersal in cercopithecines will be different for autosomal and maternally inherited genetic markers, such as the control region of the mitochondrial DNA. We used a panel of 14 highly polymorphic microsatellite loci and part of the hypervariable region I of the mitochondrial control region to estimate genetic structure between five social groups in Gibraltar. Surprisingly, for autosomal markers, both classical summary statistics and an individual-based method using a Bayesian framework detected significant genetic structure between social groups in Gibraltar, despite much closer proximity than wild Algerian and Moroccan populations. Mitochondrial data support this finding, as a very substantial portion of the total genetic variation (70.2%) was found between social groups. Using two Bayesian approaches, we likewise identified not only a small number of male first-generation immigrants (albeit less than expected for cercopithecines) but also unexpectedly a few females. We hypothesize that the culling of males that are more likely to disperse might slow down genetic homogenization among neighbouring groups, but may also and more perversely produce selection on certain behavioural traits. This may have important repercussions for conservation, as it could lead to evolutionary changes that are not due to inbreeding or genetic drift.

  17. The Vgamma2/Vdelta2 T-cell repertoire in Macaca fascicularis: functional responses to phosphoantigen stimulation by the Vgamma2/Jgamma1.2 subset.

    Science.gov (United States)

    Cairo, Cristiana; Propp, Nadia; Hebbeler, Andrew M; Colizzi, Vittorio; Pauza, C David

    2005-06-01

    Circulating Vgamma2/Vdelta2 T cells in human and non-human primates respond to small molecular weight non-peptidic phosphoantigens in a major histocompatibility complex (MHC)-unrestricted manner. These responses are encoded by the Vgamma2/Jgamma1.2 chain of the T-cell receptor and are positively selected during early development to create a biased repertoire in adults. We characterized the Vgamma2 chain in cynomolgus macaques (Macaca fascicularis) to develop a non-human primate model for studying the effects of infection and therapy on the circulating Vgamma2/Vdelta2 T-cell subset. The cynomolgus macaque Vgamma2 chain was highly homologous to the Vgamma2 chain from human beings and rhesus macaques (Macaca mulatta), though we noted conserved substitutions in critical residues within the CDR3 for both macaque species. Despite these substitutions, Vgamma2/Vdelta2+ T cells from cynomolgus monkeys exhibited polyclonal responses to two different phosphoantigens. Proliferative responses were observed with both isopentenylpyrophosphate and alendronate, but stronger interferon-gamma secretory responses were observed with isopentenylpyrophosphate. In vitro stimulation and expansion led to selective outgrowth of the Vgamma2/Jgamma1.2 subset, with a marked shift in the Vgamma2 spectratype. As a result of the less biased starting repertoire for Vgamma2, the cynomolgus macaque constitutes a sensitive model for examining the effects of in vitro or in vivo treatments on the Vgamma2/Vdelta2 T-cell population. Our studies establish the value of cynomolgus macaques as a model for Vgamma2/Vdelta2 T-cell responses to non-peptidic antigens, and further evidence the remarkable evolutionary conservation of this unusual, phosphoantigen-responsive T-cell subset that is found only in primate species.

  18. The Vγ2/Vδ2 T-cell repertoire in Macaca fascicularis: functional responses to phosphoantigen stimulation by the Vγ2/Jγ1.2 subset

    Science.gov (United States)

    Cairo, Cristiana; Propp, Nadia; Hebbeler, Andrew M; Colizzi, Vittorio; Pauza, C David

    2005-01-01

    Circulating Vγ2/Vδ2 T cells in human and non-human primates respond to small molecular weight non-peptidic phosphoantigens in a major histocompatibility complex (MHC)-unrestricted manner. These responses are encoded by the Vγ2/Jγ1.2 chain of the T-cell receptor and are positively selected during early development to create a biased repertoire in adults. We characterized the Vγ2 chain in cynomolgus macaques (Macaca fascicularis) to develop a non-human primate model for studying the effects of infection and therapy on the circulating Vγ2/Vδ2 T-cell subset. The cynomolgus macaque Vγ2 chain was highly homologous to the Vγ2 chain from human beings and rhesus macaques (Macaca mulatta), though we noted conserved substitutions in critical residues within the CDR3 for both macaque species. Despite these substitutions, Vγ2/Vδ2+ T cells from cynomolgus monkeys exhibited polyclonal responses to two different phosphoantigens. Proliferative responses were observed with both isopentenylpyrophosphate and alendronate, but stronger interferon-γ secretory responses were observed with isopentenylpyrophosphate. In vitro stimulation and expansion led to selective outgrowth of the Vγ2/Jγ1.2 subset, with a marked shift in the Vγ2 spectratype. As a result of the less biased starting repertoire for Vγ2, the cynomolgus macaque constitutes a sensitive model for examining the effects of in vitro or in vivo treatments on the Vγ2/Vδ2 T-cell population. Our studies establish the value of cynomolgus macaques as a model for Vγ2/Vδ2 T-cell responses to non-peptidic antigens, and further evidence the remarkable evolutionary conservation of this unusual, phosphoantigen-responsive T-cell subset that is found only in primate species. PMID:15885125

  19. Inbreeding depression of 28 maize elite open pollinated varieties

    Directory of Open Access Journals (Sweden)

    Cleso Antônio Patto Pacheco

    2002-01-01

    Full Text Available The study of inbreeding depression is important for breeding strategies such as use of inbred progenies or extraction of inbreed lines. A diallel of 28 maize open-pollinated varieties was evaluated in 10 environments in the early 1990s. At the same time, S1 populations for each of the 28 varieties were evaluated in the same 10 experiments (environments. Yield reductions of the populations from S0 to S1 (mean of the 10 environments, varied from 34.6% (CMS-01 to 59.2% (CMS-30, with an average of 49.1%. Inbreeding depression was greater in populations with a wider genetic base, which had never been exposed to inbreeding (CMS-30, BR-107, PH4, Cunha, Saracura, Nitrodent, and Nitroflint. Inbred lines with greater yield means should be obtained from the BR-105, BR-111, CMS-01, CMS-03, BR-106, CMS-14c, and CMS-28 populations. The use of parameter estimates generated by analysis of inbreeding depression, allow to make inferences about frequencies of deleterious alleles in the population. The frequencies of favorable alleles in the parents can be obtained by diallel analysis. The association of these two types of information, can provide a better interpretation of the genetic parameters and also can improve the process of selection of parents for either an intra- or an inter-populational breeding program.

  20. Trait-specific consequences of inbreeding on adaptive phenotypic plasticity

    DEFF Research Database (Denmark)

    Schou, Mads Fristrup; Kristensen, Torsten Nygaard; Loeschcke, Volker

    2015-01-01

    Environmental changes may stress organisms and stimulate an adaptive phenotypic response. Effects of inbreeding often interact with the environment and can decrease fitness of inbred individuals exposed to stress more so than that of outbred individuals. Such an interaction may stem from a reduce...

  1. Minimizing inbreeding by managing genetic contributions across generations

    NARCIS (Netherlands)

    Sanchez-Rodriquez, L.; Bijma, P.; Woolliams, J.A.

    2003-01-01

    Here we present the strategy that achieves the lowest possible rate of inbreeding (DeltaF) for a population with unequal members of sires and dams with random mating. This new strategy results in a DeltaF as much as 10% lower than previously achieved. A simple and efficient approach to reducing inbr

  2. Estimates of inbreeding depression in the South African Jersey ...

    African Journals Online (AJOL)

    ARC-IRENE

    Estimates of genetic parameters and effect of inbreeding on milk yield and composition ... REML algorithm was used to obtain estimates of the variance components, ratios and empirical best linear .... The matrix representation of the model is as follows: e ... where is the solution vector for fixed effects, is a vector of contrasts,.

  3. Mitsuda's reactions: induced by BCG in the normal Rhesus ("Macacca mulatta"

    Directory of Open Access Journals (Sweden)

    M. J. Pereira Filho

    1955-12-01

    Full Text Available The reversals of Mitsuda's reactions induced by BCG have been objected to based on the possiblem interference of other determination causes of the phenomenon: tuberculous primo-infections, communicants of unsuspected leprosy, revearsals due to other causes, such as anti-diphteric and anti-tetanic vaccination, etc. In order to study the problem, we have used Rhesus monkeys (Macaca mulatta, which were reared in isolation, in an attempt to avoid the referred to interferences. Prior to the experiments, all animals were tested and found negative to radiograph, tuberculin and lepromin tests and were then submitted to the application of BCG vaccine (from 1 to 3 days old, in different doses and by different via. At different times, after the application of BCG, they were again submitted to the radiographic, tuberculin and lepromin tests. In the tables I to IV the experiences were summarised. From the experiments, the following conclusions were reached: 1 - From 12 Rhesus that received BCG 11 showed reversals of the Mitsuda reaction (91.7%. 2 - These reverseals took place both in tests effected shortly after BCG (from 6 days to 2 months, and tests effected much later (from 7 to 12 months after BCG. 3 - Some differences were found in the results, according to the dosis and the application via of the BCG. a - The testicular and peritonela via (0,02g were the only that determined strong positive Mitsuda's reactions (+++. b - By oral via, animals that received high dosis (0.6g and 1.2 g, there resulted uniform and regular reversals, even though of low intensity (+; but from those who got small doses (0.2 g. one showed no reversals in all tests, and the other presented reversals in the 2nd and 3rd tests only, also with low positivity (+. 4 In the 2nd and 3rd Mitsuda's reactions in the same animals, positivity was always precocious (generally within 48 hours, one getting the impression that there occurs a sensibilization of the animal body by the antigen with

  4. A new theory for the evolution of polyandry as a means of inbreeding avoidance.

    Science.gov (United States)

    Cornell, Stephen J; Tregenza, Tom

    2007-11-22

    We propose a novel theory for the evolution of polyandry driven by genetic benefits to females whose offspring interbreed. In species with an ecology characterized by frequent colonization of new habitat patches, consanguineous matings may be common during the early stages of colonization, but genetic diversity may grow as new colonizers arrive. We show that with levels of inbreeding depression similar to those found in predominantly inbreeding populations, a polyandrous female can benefit her descendants since matings among her brood are mainly between half siblings rather than full siblings. We examine the invasion by a polyandrous phenotype using explicit genetic models in which costs of inbreeding are themselves subject to selection. In common with other models of inbreeding, we find that underlying high levels of inbreeding tend to purge deleterious recessive alleles, and hence these are unlikely to maintain sufficient inbreeding depression to favour polyandry. However, if costs of inbreeding are due to overdominance, biologically realistic levels of inbreeding depression result in genetic benefits large enough to favour polyandry provided it is not too costly. The potential significance of polyandry as a mechanism to reduce inbreeding in grandchildren will depend upon the genetic basis of inbreeding depression in natural, inbreeding populations.

  5. Osseointegration of dental implants in Macaca fascicularis

    Science.gov (United States)

    Dewi, R. S.; Odang, R. W.; Odelia, L.

    2017-08-01

    Osseointegration is an important factor in determining the success of a dental implant. It can be assessed from the osseointegration that occurs between the implant and the bone. The implant stability is determined by the osseous support at the implant-bone interface, which is commonly evaluated by histomorphometric analysis. This study aimed to evaluate whether the osseointegration level measured by a Low Resonance Frequency Analyzer (LRFA) gave results as good as those obtained by histomorphometric examination. Six male Macaca fascicularis were used in this study. In each animal, two types of loading were performed: immediate and delayed loading. Clinical examination and LRFA measurement were performed to determine osseointegration at the first and second weeks and at the first, second, third, and fourth months. After four months, histomorphometric examination was performed. The relationship between the histomorphometric examination and LRFA measurement was compared using the Pearson correlation coefficient. There was no significant difference in the osseointegration between immediate loading and delayed loading (p > 0.05) The bone-implant contact percentage in the first group did not differ significantly from that in the second group. Statistical analysis showed that there was a strong correlation between LRFA measurement and histomorphometric examination. Osseointegration could be evaluated through LRFA measurement as well as through histomorphometric examination.

  6. NCBI nr-aa BLAST: CBRC-GGOR-01-0701 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-GGOR-01-0701 ref|NP_001036112.1| G protein-coupled receptor 15 [Macaca mulatta...ed receptor gpr15 [Macaca mulatta] gb|AAC72401.1| putative chemokine receptor [Macaca mulatta] gb|ABI73902.1...| G-protein coupled receptor 15 [Macaca mulatta] gb|ABI73909.1| G-protein coupled receptor 15 [Macaca mula...tta] gb|ABI73923.1| G-protein coupled receptor 15 [Macaca mulatta] gb|ABI73930.1| G...-protein coupled receptor 15 [Macaca mulatta] gb|ABI73943.1| G-protein coupled receptor 15 [Macaca mulatta] NP_001036112.1 1e-170 97% ...

  7. Estimating inbreeding rates in natural populations: Addressing the problem of incomplete pedigrees

    Science.gov (United States)

    Miller, Mark P.; Haig, Susan M.; Ballou, Jonathan D.; Steel, E. Ashley

    2017-01-01

    Understanding and estimating inbreeding is essential for managing threatened and endangered wildlife populations. However, determination of inbreeding rates in natural populations is confounded by incomplete parentage information. We present an approach for quantifying inbreeding rates for populations with incomplete parentage information. The approach exploits knowledge of pedigree configurations that lead to inbreeding coefficients of F = 0.25 and F = 0.125, allowing for quantification of Pr(I|k): the probability of observing pedigree I given the fraction of known parents (k). We developed analytical expressions under simplifying assumptions that define properties and behavior of inbreeding rate estimators for varying values of k. We demonstrated that inbreeding is overestimated if Pr(I|k) is not taken into consideration and that bias is primarily influenced by k. By contrast, our new estimator, incorporating Pr(I|k), is unbiased over a wide range of values of kthat may be observed in empirical studies. Stochastic computer simulations that allowed complex inter- and intragenerational inbreeding produced similar results. We illustrate the effects that accounting for Pr(I|k) can have in empirical data by revisiting published analyses of Arabian oryx (Oryx leucoryx) and Red deer (Cervus elaphus). Our results demonstrate that incomplete pedigrees are not barriers for quantifying inbreeding in wild populations. Application of our approach will permit a better understanding of the role that inbreeding plays in the dynamics of populations of threatened and endangered species and may help refine our understanding of inbreeding avoidance mechanisms in the wild.

  8. Assessment of inbreeding depression for functional herd life in the ...

    African Journals Online (AJOL)

    p2492989

    P-value b F ± SE. P-value. 1. -0.0010 ± 0.0005**. 0.0455. -0.1874 ± 0.1995. 0.3472. 2 ... the individual inbreeding of animals in the population, accounting for the amount of known pedigree ... This property is an advantage of ∆Fi over Fi when pedigree is incomplete. The .... Van Wyk, J.B., Fair, M.D. & Cloete, S.W.P., 2009.

  9. Inbreeding and surnames: a projection into Easter Island's past.

    Science.gov (United States)

    González-Martín, Antonio; García-Moro, Clara; Hernández, Miguel; Moral, Pedro

    2006-03-01

    The population of Easter Island is one of the most interesting extant human communities due to its unique demographic history, its geographic isolation, and the development of an incomparable culture characterized by the towering "Moais" and its enigmatic writing. Following the colonization of its population by Polynesians from the Mangarevan Islands in the 5th century AD, the island remained isolated up until the middle of the 20th century. Under these conditions, with endogamy levels fluctuating between 61.04-96.54% and given such a small population, a high rate of inbreeding, and consequently, an elevated level of genetic relationships would be expected. Using data from church and civil records, we calculated the consanguinity of the population of Rapa Nui. The results of this analysis do not support the hypothesis of a high level of consanguinity (alpha = 0.00028 and F(t) = 0.0007, with F(r) = 0.00586 and F(n) = -0.00519), suggesting instead the existence of a strategy used to avoid marriage between close relatives. To explain these observations, the structure and exchange dynamics of the population were studied in the tribes, known locally as "Mata." The results of this analysis suggest a tendency toward the avoidance of inbreeding within tribes, in order to decrease the rate of endogamy in each group. This is consistent with ethnographic observations from the beginning of the 20th century that support the existence of strict regulations to prevent inbreeding between closely related individuals. Furthermore, we confirm that this situation dates back to a period before the "refounding" of Easter Island. Our results demonstrate that conditions of geographical isolation are not in themselves sufficient to produce an elevated inbreeding coefficient, revealing Easter Island as an interesting example of how cultural rules can shape the genetic structure of a population.

  10. Craniodental variation among Macaques (Macaca, nonhuman primates

    Directory of Open Access Journals (Sweden)

    Pan Ruliang

    2002-05-01

    Full Text Available Abstract Background In terms of structure and function, the skull is one of the most complicated organs in the body. It is also one of the most important parts in terms of developmental and evolutionary origins. This complexity makes it difficult to obtain evolutionary assessments if, as is usually the case with fossils, only part of the skull is available. For this reason this study involves a set of comparisons whereby the smallest functional units are studied first, and these built up, through a triple-nested hierarchical design, into more complex anatomical regions and eventually into the skull-as-a-whole. This design has been applied to macaques (Macaca in order to reveal patterns of variation at the different levels. The profiles of such variation have been obtained both within and between species. This has lead to a search for the skull parts that have undergone similar selection pressures during evolution and comparable development patterns in both ontogeny and phylogeny. Results Morphometric analysis (Principal Components was used to obtain these profiles of species and sex separations based on 77 cranial variables from 11 species of macaques. The results showed that 7 functional units could be aggregated into three functionally reasonable anatomical regions on the basis of similarities in profiles. These were: the masticatory apparatus containing mandible, lower teeth and upper teeth, the face as a whole combining maxilla (actually lower face and upper face, and the cranium as a whole involving cranium and calvaria. Twenty-six variables were finally selected for analyzing the morphology of the whole skull. This last showed an overall profile similar to that revealed in the masticatory apparatus but also contained additional information pertaining to individual species and species-groups separations. Conclusions The study provides a model for carrying out analysis of species separations and sex variation simultaneously. Through this

  11. Better Fitness in Captive Cuvier’s Gazelle despite Inbreeding Increase: Evidence of Purging?

    OpenAIRE

    Eulalia Moreno; Javier Pérez-González; Juan Carranza; Jordi Moya-Laraño

    2015-01-01

    Captive breeding of endangered species often aims at preserving genetic diversity and to avoid the harmful effects of inbreeding. However, deleterious alleles causing inbreeding depression can be purged when inbreeding persists over several generations. Despite its great importance both for evolutionary biology and for captive breeding programmes, few studies have addressed whether and to which extent purging may occur. Here we undertake a longitudinal study with the largest captive populatio...

  12. Metabolomic signatures of inbreeding at benign and stressful temperatures in Drosophila melanogaster.

    Science.gov (United States)

    Pedersen, Kamilla Sofie; Kristensen, Torsten Nygaard; Loeschcke, Volker; Petersen, Bent O; Duus, Jens Ø; Nielsen, Niels Chr; Malmendal, Anders

    2008-10-01

    While the population genetics of inbreeding is fairly well understood, the effects of inbreeding on the physiological and biochemical levels are not. Here we have investigated the effects of inbreeding on the Drosophila melanogaster metabolome. Metabolite fingerprints in males from five outbred and five inbred lines were studied by nuclear magnetic resonance spectroscopy after exposure to benign temperature, heat stress, or cold stress. In both the absence and the presence of temperature stress, metabolite levels were significantly different among inbred and outbred lines. The major effect of inbreeding was increased levels of maltose and decreased levels of 3-hydroxykynurenine and a galactoside [1-O-(4-O-(2-aminoethyl phosphate)-beta-d-galactopyranosyl)-x-glycerol] synthesized exclusively in the paragonial glands of Drosophila species, including D. melanogaster. The metabolomic effect of inbreeding at the benign temperature was related to gene expression data from the same inbred and outbred lines. Both gene expression and metabolite data indicate that fundamental metabolic processes are changed or modified by inbreeding. Apart from affecting mean metabolite levels, inbreeding led to an increased between-line variation in metabolite profiles compared to outbred lines. In contrast to previous observations revealing interactions between inbreeding and environmental stress on gene expression patterns and life-history traits, the effect of inbreeding on the metabolite profile was similar across the different temperature treatments.

  13. Inbreeding among Caribbean Hispanics from the Dominican Republic and its effects on risk of Alzheimer disease.

    Science.gov (United States)

    Vardarajan, Badri N; Schaid, Daniel J; Reitz, Christiane; Lantigua, Rafael; Medrano, Martin; Jiménez-Velázquez, Ivonne Z; Lee, Joseph H; Ghani, Mahdi; Rogaeva, Ekaterina; St George-Hyslop, Peter; Mayeux, Richard P

    2015-08-01

    Inbreeding can be associated with a modification of disease risk due to excess homozygosity of recessive alleles affecting a wide range of phenotypes. We estimated the inbreeding coefficient in Caribbean Hispanics and examined its effects on risk of late-onset Alzheimer disease. The inbreeding coefficient was calculated in 3,392 subjects (1,451 late-onset Alzheimer disease patients and 1,941 age-matched healthy controls) of Caribbean Hispanic ancestry using 177,997 nearly independent single-nucleotide polymorphisms from genome-wide array. The inbreeding coefficient was estimated using the excess homozygosity method with and without adjusting for admixture. The average inbreeding coefficient in Caribbean Hispanics without accounting for admixture was F = 0.018 (±0.048), suggesting a mating equivalent to that of second cousins or second cousins once removed. Adjusting for admixture from three parent populations, the average inbreeding coefficient was found to be 0.0034 (±0.019) or close to third-cousin mating. Inbreeding coefficient was a significant predictor of Alzheimer disease when age, sex, and APOE genotype were used as adjusting covariates (P = 0.03). The average inbreeding coefficient of this population is significantly higher than that of the general Caucasian populations in North America. The high rate of inbreeding resulting in increased frequency of recessive variants is advantageous for the identification of rare variants associated with late-onset Alzheimer disease.Genet Med 17 8, 639-643.

  14. The effect of inbreeding on defence against multiple enemies in Datura stramonium.

    Science.gov (United States)

    Bello-Bedoy, R; Núñez-Farfán, J

    2011-03-01

    The ability of plants to respond to natural enemies might depend on the availability of genetic variation for the optimal phenotypic expression of defence. Selfing can affect the distribution of genetic variability of plant fitness, resistance and tolerance to herbivores and pathogens. The hypothesis of inbreeding depression influencing plant defence predicts that inbreeding would reduce resistance and tolerance to damage by natural enemies relative to outcrossing. In a field experiment entailing experimentally produced inbred and outcrossed progenies, we assessed the effects of one generation of selfing on Datura stramonium resistance and tolerance to three types of natural enemies, herbivores, weevils and a virus. We also examined the effect of damage on relative growth rate (RGR), flower, fruit, and seed production in inbred and outcrossed plants. Inbreeding significantly reduced plant defence to natural enemies with an increase of 4% in herbivore damage and 8% in viral infection. These results indicate inbreeding depression in total resistance. Herbivory increased 10% inbreeding depression in seed number, but viral damage caused inbred and outcrossed plants to have similar seed production. Inbreeding and outcrossing effects on fitness components were highly variable among families, implying that different types or numbers of recessive deleterious alleles segregate following inbreeding in D. stramonium. Although inbreeding did not equally alter all the interactions, our findings indicate that inbreeding reduced plant defence to herbivores and pathogens in D. stramonium.

  15. Molecular and pedigree measures of relatedness provide similar estimates of inbreeding depression in a bottlenecked population.

    Science.gov (United States)

    Townsend, S M; Jamieson, I G

    2013-04-01

    Individual-based estimates of the degree of inbreeding or parental relatedness from pedigrees provide a critical starting point for studies of inbreeding depression, but in practice wild pedigrees are difficult to obtain. Because inbreeding increases the proportion of genomewide loci that are identical by descent, inbreeding variation within populations has the potential to generate observable correlations between heterozygosity measured using molecular markers and a variety of fitness related traits. Termed heterozygosity-fitness correlations (HFCs), these correlations have been observed in a wide variety of taxa. The difficulty of obtaining wild pedigree data, however, means that empirical investigations of how pedigree inbreeding influences HFCs are rare. Here, we assess evidence for inbreeding depression in three life-history traits (hatching and fledging success and juvenile survival) in an isolated population of Stewart Island robins using both pedigree- and molecular-derived measures of relatedness. We found results from the two measures were highly correlated and supported evidence for significant but weak inbreeding depression. However, standardized effect sizes for inbreeding depression based on the pedigree-based kin coefficients (k) were greater and had smaller standard errors than those based on molecular genetic measures of relatedness (RI), particularly for hatching and fledging success. Nevertheless, the results presented here support the use of molecular-based measures of relatedness in bottlenecked populations when information regarding inbreeding depression is desired but pedigree data on relatedness are unavailable. © 2013 The Authors. Journal of Evolutionary Biology © 2013 European Society For Evolutionary Biology.

  16. NCBI nr-aa BLAST: CBRC-MLUC-01-1082 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-MLUC-01-1082 ref|XP_001105680.1| PREDICTED: similar to adiponectin receptor 1 ...isoform 3 [Macaca mulatta] ref|XP_001105751.1| PREDICTED: similar to adiponectin receptor 1 isoform 4 [Macac...a mulatta] ref|XP_001105805.1| PREDICTED: similar to adiponectin receptor 1 isoform 5 [Macaca mulatta] ref|X...P_001105878.1| PREDICTED: similar to adiponectin receptor 1 isoform 6 [Macaca mul...atta] ref|XP_001105957.1| PREDICTED: similar to adiponectin receptor 1 isoform 7 [Macaca mulatta] dbj|BAG16753.1| adiponectin receptor1 [Macaca fuscata] XP_001105680.1 0.0 87% ...

  17. Gene : CBRC-PTRO-02-0012 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available ICTED: hypothetical protein [Macaca mulatta] 4e-63 33% MCMCVCVYMRIYTHCVCVYVYMRIYTHCVCMCICVYKHTVCVYVYIYTHCVCV...SIYNCVCICVSIYTLCVCICVSIYTLCVCICVSIYTLCVCMCVYIHTVCVYICVSIYTLCVYMCVYIHTVCVYVCLYTHCVCEYVCLYTHCVCICVSTYTLCVCICVCLHTHC...VCMCVCVSTYTLCVYVCMCVSTYTLCVYVCVCLHTHCACMCVCLHTHCACMCVSTYTLCVCVCVYIHTVRVCVCLHTHCACVCVYIHTVRVCVCLHTHC...ACVCVCLHTHCACVCVCLHTHCACVWGGLHTHCVCVGGSTYTLCVCVCVYICTLCVCVYMCI ...

  18. NCBI nr-aa BLAST: CBRC-MMUR-01-0376 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-MMUR-01-0376 ref|XP_001091068.1| PREDICTED: melanoma antigen family D, 2 isofo...rm 2 [Macaca mulatta] ref|XP_001091197.1| PREDICTED: melanoma antigen family D, 2 isoform 3 [Macaca mulatta]... ref|XP_001091315.1| PREDICTED: melanoma antigen family D, 2 isoform 4 [Macaca mulatta] ref|XP_001091438.1| PREDICTED: melanoma... antigen family D, 2 isoform 5 [Macaca mulatta] ref|XP_001091552.1| PREDICTED: melanoma

  19. Gene : CBRC-PTRO-25-0004 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available TED: hypothetical protein [Macaca mulatta] 2e-45 21% MCNYFLSTPFLLLSLSLCLCLSLSLSSLSVSLSLPISLSLSLCLSLSLCLSSVLLPFSACLSVSLSLFVCLSLSLS...LRVCFSPSLSLSLFLSVSLGLSPSISVCLSLSFSLSLSVSLCLFLSLCLSSILFSFSACLSLSLFVSLCLSLSISVFLCLSLCLSVSLFPISLSLSLSLS...VSLTVSVFCLILFLCLSVCWSLSLALSPCLSVCLSLSLFFSLLFFSLSLCLSVSLSLSLCLSLSPCLSLCVCLLSYFLCLSVCLSLS...LLVCFSLCLCLSLSVSLSPSVCLCLSLSLSLSLSLSFFISVSPSVSVSLSLCVCVCLLSYSLSLPVGLPVCLSVSVSVCLSLFLSLSLFLFLSLSISVFLCVFICLSLSLFLFVYLCISLSVSLCLCLSLSCSLSGSCYLPPSLSLQNKFKYI ...

  20. Gene : CBRC-PABE-26-1113 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CTED: hypothetical protein [Macaca mulatta] 1e-35 21% MTGMSHCARPVSLFLSFLSLSVCLYSVLLSSLPVGLSLSVCLSPSLSVSLSLSLSLSLSLSLSLAVSLCPSLS...VFFSVCLSLSFSLSLSLSPSACLSHCVSLLSYSLSLPACLSLPLSFCFSLYISHSLHLSLSVSLCLCLSLSVSVSLPPCLFLSLSLSLSLSFCFSLSISVFLCLSLSFSLSLS...LSLCLSLSLCLSSVLLSFSACLSVSPSLSLSLCLSLSFSLCLSLCVCLFLSFSVSLSVSSLSVSVCVSVSLSVSLPTCLSVSLCLCLCLCLSLFLSVSLCLSLSISVFLCLSLSLSV ...

  1. Gene : CBRC-PABE-26-1168 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CTED: hypothetical protein [Macaca mulatta] 8e-34 21% MTGMSHCAQPVSLFLSFLSLCLCVPVFCLTLFSACRSLSVCLSPSLSVSLSLSLSLSLSLSLSLAVSLCPSLS...VSFSVCLSLSFSLSLSLSPSACLSHCVSLLSYSLSLPACLSLPLSFCFSLYISHSLRLSLSVSLCLCLSLSVSVSLPPCLSVSVSFSVSVSLFLFLSVHLCLSLS...VSFSVCLSLSLCLFLSLSACLTHCVCLLSYSLSLPVCLSLSPSLSLSLSVSLFLFLSVCLCVSVCFCLSLSLSLFPLRLSLSVCLSLSLSLSLRVCLFLSVSVSVSLSFCLFLSVSLCPSMSFYVCLFL ...

  2. Gene : CBRC-PABE-26-0085 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CTED: hypothetical protein [Macaca mulatta] 1e-31 22% MTGMSHCARPVSLFLSFLSLSVCLYSVLLSSLPVGLSLSVCLSPSLSVSLSLSLSLSLSLSLSLAVSLCPSLS...VSFSVCLSLSFSLSLSLSPSACLSHCVSLLSYSLSLPACLSLPLSFCFSLYISHSLHLSLSVSLCLCLSLSVSVSLPPCLSVSVSFSISVSLFLFLSVHLCLSLPVSLS...VSLFLSVSFSLSLCLSLSLCLSSILLSFSACLSVCLSLSFSFSLSLSFCFSLSVCFSLSLSLSLFPLCLSLSECLSLSLSLS...IPVCLFLSVSVSVSLSFCLFLSVSLCPSLSFYVCLFLCQSLRSPMTERALPLPRKSEGPA ...

  3. Gene : CBRC-PTRO-25-0005 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available TED: hypothetical protein [Macaca mulatta] 2e-31 18% MTGVSHHTRTVSLFLSLSLSLSLCAYLLSYSLSLPVCLSLSLSLSLSLSLAVSLCPSLSVSFSVCLSLSFSLSLS...PSACLSHCVCLLSYSPSLSVCLSLPLSFCFSLYLSLSPSLSFCLFLSVSVSLPACLSLSVSLPPCLFLSLSLSLSLSVSLCPSLSFSVSLSLCLCLSLS...LPVSLTVSVFCLNLSLPFCLSLSLPPFLSLSPSLSLSVSLCLSLCVCFSLFLCLSLCFCLFLSVCLSLSLSLSLPDCLFLSLSLSLSLSVSLCLSLSISVFLCLSLSLSVCQSPRAGEGPAPSKKVRSTCLERPRGI ...

  4. Gene : CBRC-CJAC-01-1478 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CTED: hypothetical protein [Macaca mulatta] 5e-45 28% MYVCMYVSIYLSIYLSLSVCLSLSVCLCFSMYLCLSIYLSISLSIYPSVCCLSG...YLSSMYLCIYLYICLCVCLSFCVSVCLSGYPSIWLAIYLSIYYWSICLFVCKSVCLSIFLYVSVHLSICLSVHLCIHLSVWLSLSLSVYLSLCLSIYLSIYLSIYLSIHLSLSVCLSGCLSI...YVPMNVYILSMYVCIYLSIYLYSCLFFCLSIWLSFYLSVCRSIYLFGYLSIYLCVSVPVCLSVYQSV...ICLSVSLSLYLSVSVCMYICLFVYLSIYLSIHFSICLSIQLSVFLSIWLSICPSVCLSFCLSVYLAIHLSGWLSIYLSS ...

  5. Trait specific consequences of fast and slow inbreeding: lessonsfrom captive populations of Drosophila melanogaster

    DEFF Research Database (Denmark)

    Mikkelsen, Karina Aarup; Loeschcke, Volker; Kristensen, Torsten Nygaard

    2010-01-01

    The increased homozygosity due to inbreeding leads to expression of deleterious recessive alleles, which may cause inbreeding depression in small populations. The severity of inbreeding depression has been suggested to depend on the rate of inbreeding, with slower inbreeding being more effective...... in purging deleterious alleles of smaller effect. The effectiveness of purging is however dependent on various factors such as the effect of the deleterious, recessive alleles, the genetic background of inbreeding depression and the environment in which purging occurs. Investigations have shown inconclusive...... results as to whether purging efficiently diminish inbreeding depression. Here we used an ecologically relevant inbreeding coefficient (f ≈ 0.25) and generated ten slow and ten fast inbred lines of Drosophila melanogaster by keeping the effective population size constant at respectively 32 and 2 for 19...

  6. The association of genotype-based inbreeding coefficient with a range of physical and psychological human traits

    NARCIS (Netherlands)

    Verweij, K.J.H.; Abdellaoui, A.; Veijola, J.; Sebert, S.; Koiranen, M.; Keller, M.C.; Jarvelin, M.R.; Zietsch, B.P.

    2014-01-01

    Across animal species, offspring of closely related mates exhibit lower fitness, a phenomenon called inbreeding depression. Inbreeding depression in humans is less well understood because mating between close relatives is generally rare and stigmatised, confounding investigation of its effect on

  7. NCBI nr-aa BLAST: CBRC-OLAT-05-0030 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-OLAT-05-0030 gb|ABI73898.1| G-protein coupled receptor 15 [Macaca mulatta] gb|...ABI73899.1| G-protein coupled receptor 15 [Macaca mulatta] gb|ABI73922.1| G-protein coupled receptor 15 [Macaca mulatta] ABI73898.1 8e-52 39% ...

  8. NCBI nr-aa BLAST: CBRC-GACU-23-0002 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-GACU-23-0002 gb|ABI73898.1| G-protein coupled receptor 15 [Macaca mulatta] gb|...ABI73899.1| G-protein coupled receptor 15 [Macaca mulatta] gb|ABI73922.1| G-protein coupled receptor 15 [Macaca mulatta] ABI73898.1 2e-57 40% ...

  9. NCBI nr-aa BLAST: CBRC-ACAR-01-0676 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-ACAR-01-0676 gb|ABI73898.1| G-protein coupled receptor 15 [Macaca mulatta] gb|...ABI73899.1| G-protein coupled receptor 15 [Macaca mulatta] gb|ABI73922.1| G-protein coupled receptor 15 [Macaca mulatta] ABI73898.1 1e-102 56% ...

  10. NCBI nr-aa BLAST: CBRC-EEUR-01-1584 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-EEUR-01-1584 gb|ABI73898.1| G-protein coupled receptor 15 [Macaca mulatta] gb|...ABI73899.1| G-protein coupled receptor 15 [Macaca mulatta] gb|ABI73922.1| G-protein coupled receptor 15 [Macaca mulatta] ABI73898.1 1e-109 77% ...

  11. NCBI nr-aa BLAST: CBRC-PCAP-01-1223 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-PCAP-01-1223 gb|ABI73898.1| G-protein coupled receptor 15 [Macaca mulatta] gb|...ABI73899.1| G-protein coupled receptor 15 [Macaca mulatta] gb|ABI73922.1| G-protein coupled receptor 15 [Macaca mulatta] ABI73898.1 8e-34 77% ...

  12. Inbreeding among some Brahman populations of Tamil Nadu.

    Science.gov (United States)

    Srinivasan, S; Mukherjee, D P

    1976-01-01

    A statewide survey of four endogamous Brahman populations of Tamil Nadu reveals a low level of inbreeding in three of them. In the fourth population, the Thengalai, the level is higher, but not as high as in other social castes. The Tamil Brahmans rank next to the Telugu and the Kanarese Brahmans in this respect. Uncle-niece marriages also occur as in Telugu-speaking populations, and these exceed in the two Ayyangar populations in comparison to the Ayyar. A decline of first-cousin marriages and an increase of uncle-niece marriages are detected in the first two living generations in each population.

  13. Effects of inbreeding on survival, body weight and fluctuating asymmetry (FA) in Nile tilapia, Oreochromis niloticus

    NARCIS (Netherlands)

    Fessehaye, Y.; Komen, J.; Rezk, M.A.; Arendonk, van J.A.M.; Bovenhuis, H.

    2007-01-01

    The present study investigated the effects of different levels of inbreeding on survival, growth, body weight and fluctuating asymmetry (FA) in O. niloticus. We mated 20 sires and 35 dams in a full-sib/half-sib mating design to produce 35 full-sib families with expected level of inbreeding (F%.) of

  14. Investigating Inbreeding Depression for Heat Stress Tolerance in the Model Organism "Drosophila Melanogaster"

    Science.gov (United States)

    Pedersen, Kamilla Sofie; Pedersen, Louise Dybdahl; Sorensen, Anders Christian; Nielsen, Anna Busch; Kristensen, Torsten Nygaard

    2012-01-01

    Mating between closely related individuals often causes reduced fitness, which is termed "inbreeding depression". Inbreeding is, therefore, a threat towards the persistence of animal and plant populations. Here we present methods and results from a practical for high-school and first-year university students and discuss learning outcomes…

  15. Allometric and non-allometric consequences of inbreeding on Drosophila melanogaster wings

    DEFF Research Database (Denmark)

    Trotta, Vincenzo; Cavicchi, Sandro; Guerra, Daniela

    2011-01-01

    Inbreeding is expected to increase the variability in size and shape within populations. The distinct effects of inbreeding on size and shape suggest that they are governed by different developmental pathways. One unresolved question is whether the non-allometric shape component is partially unco...

  16. Academic Inbreeding: Exploring Its Characteristics and Rationale in Japanese Universities Using a Qualitative Perspective

    Science.gov (United States)

    Horta, Hugo; Sato, Machi; Yonezawa, Akiyoshi

    2011-01-01

    This study analyses why and how academic inbreeding as a recruitment practice continues to prevail in Japan, a country with a mature higher education system, where high rates of academic inbreeding endure in most of the research-oriented universities in spite of several higher education reforms. Based on a qualitative analysis, we disclose three…

  17. Marker-assisted selection reduces expected inbreeding but can result in large effects of hitchhiking.

    Science.gov (United States)

    Pedersen, L D; Sørensen, A C; Berg, P

    2010-06-01

    We used computer simulations to investigate to what extent true inbreeding, i.e. identity-by-descent, is affected by the use of marker-assisted selection (MAS) relative to traditional best linear unbiased predictions (BLUP) selection. The effect was studied by varying the heritability (h(2) = 0.04 vs. 0.25), the marker distance (MAS vs. selection on the gene, GAS), the favourable QTL allele effect (alpha = 0.118 vs. 0.236) and the initial frequency of the favourable QTL allele (p = 0.01 vs. 0.1) in a population resembling the breeding nucleus of a dairy cattle population. The simulated genome consisted of two chromosomes of 100 cM each in addition to a polygenic component. On chromosome 1, a biallelic QTL as well as 4 markers were simulated in linkage disequilibrium. Chromosome 2 was selectively neutral. The results showed that, while reducing pedigree estimated inbreeding, MAS and GAS did not always reduce true inbreeding at the QTL relative to BLUP. MAS and GAS differs from BLUP by increasing the weight on Mendelian sampling terms and thereby lowering inbreeding, while increasing the fixation rate of the favourable QTL allele and thereby increasing inbreeding. The total outcome in terms of inbreeding at the QTL depends on the balance between these two effects. In addition, as a result of hitchhiking, MAS results in extra inbreeding in the region surrounding QTL, which could affect the overall genomic inbreeding.

  18. The effects of inbreeding and heat stress on male sterility in Drosophila melanogaster

    NARCIS (Netherlands)

    Pedersen, Louise Dybdahl; Pedersen, Asger Roer; Bijlsma, R.; Bundgaard, Jorgen

    2011-01-01

    Understanding the consequences of inbreeding in combination with stress is important for the persistence of small endangered populations in a changing environment. Inbreeding and stress can influence the population at all stages of the life cycle, and in the last two decades a number of studies have

  19. Investigating Inbreeding Depression for Heat Stress Tolerance in the Model Organism "Drosophila Melanogaster"

    Science.gov (United States)

    Pedersen, Kamilla Sofie; Pedersen, Louise Dybdahl; Sorensen, Anders Christian; Nielsen, Anna Busch; Kristensen, Torsten Nygaard

    2012-01-01

    Mating between closely related individuals often causes reduced fitness, which is termed "inbreeding depression". Inbreeding is, therefore, a threat towards the persistence of animal and plant populations. Here we present methods and results from a practical for high-school and first-year university students and discuss learning outcomes…

  20. Estimate of Inbreeding Coefficient and Its Effects on Reproductive Traits of Dairy Herds in Isfahan Province

    Directory of Open Access Journals (Sweden)

    S. Gholizadeh

    2016-06-01

    Full Text Available This study was carried out to study the inbreeding coefficient and its effect on reproductive performance of dairy cows (age at first calving, calving interval and open days in Isfahan province. Records of 31,977 (primiparous cows, 36,982 and 51,423 (multiparous cows for age at first calving, calving interval and open days were used, respectively. The inbreeding coefficients of animals were calculated using pedigree information of 78,425 females and 8,056 males, which were born from 1963 to 2009. The overall mean and maximum inbreeding coefficients in Holstein cows were 2.33% and 31.30%, respectively. The results showed that 57,234 animals were inbred with 3.57% inbreeding coefficient. Regression coefficients on inbreeding coefficient for age at first calving, calving interval and open days were 0.589±0.21, 1.08±0.15 and 0.27±12, respectively. Estimated inbreeding indicated significantly negative effect on the reproductive traits in different parturition periods. The results revealed that the average inbreeding trend was increased in the dairy herds. The increased inbreeding was due to close mating systems between the candidates, and it showed negative effects on the reproductive traits in Isfahan dairy herds.

  1. Investigating Inbreeding Depression for Heat Stress Tolerance in the Model Organism "Drosophila Melanogaster"

    Science.gov (United States)

    Pedersen, Kamilla Sofie; Pedersen, Louise Dybdahl; Sorensen, Anders Christian; Nielsen, Anna Busch; Kristensen, Torsten Nygaard

    2012-01-01

    Mating between closely related individuals often causes reduced fitness, which is termed "inbreeding depression". Inbreeding is, therefore, a threat towards the persistence of animal and plant populations. Here we present methods and results from a practical for high-school and first-year university students and discuss learning outcomes of the…

  2. Telomere length reveals cumulative individual and transgenerational inbreeding effects in a passerine bird

    NARCIS (Netherlands)

    Bebbington, Kat; Spurgin, Lewis G; Fairfield, Eleanor A; Dugdale, Hannah L; Komdeur, Jan; Burke, Terry; Richardson, David S

    2016-01-01

    Inbreeding results in more homozygous offspring that should suffer reduced fitness, but it can be difficult to quantify these costs for several reasons. First, inbreeding depression may vary with ecological or physiological stress and only be detectable over long time periods. Second, parental homoz

  3. A comparison of inbreeding Depression in Tropical and Widespread Drosophila Species

    DEFF Research Database (Denmark)

    Bechsgaard, Jesper Smærup; Hoffmann, Ary A; Sgró, Carla

    2013-01-01

    The evolutionary history of widespread and specialized species is likely to cause a different genetic architecture of key ecological traits in the two species group. This may affect how these two groups respond to inbreeding. Here we investigate inbreeding effects in traits related to performance...... in 5 widespread and 5 tropical restricted species of Drosophila with aim of testing whether the two species groups suffered differently from inbreeding depression. The traits investigated wwere egg-to-adult viability, develpmental time and resistance to heat, vold and desiccation. Our results showed...... that levels of inbreeding depression were species and trait specific and did not differ between the species groups for stress resistance traits. However, for the life history traits developmental time and egg-to-adult viability, more inbreeding depression was observed in the tropical species. The results...

  4. The environmental dependence of inbreeding depression in a wild bird population.

    Directory of Open Access Journals (Sweden)

    Marta Szulkin

    Full Text Available BACKGROUND: Inbreeding depression occurs when the offspring produced as a result of matings between relatives show reduced fitness, and is generally understood as a consequence of the elevated expression of deleterious recessive alleles. How inbreeding depression varies across environments is of importance for the evolution of inbreeding avoidance behaviour, and for understanding extinction risks in small populations. However, inbreeding-by-environment (IxE interactions have rarely been investigated in wild populations. METHODOLOGY/PRINCIPAL FINDINGS: We analysed 41 years of breeding events from a wild great tit (Parus major population and used 11 measures of the environment to categorise environments as relatively good or poor, testing whether these measures influenced inbreeding depression. Although inbreeding always, and environmental quality often, significantly affected reproductive success, there was little evidence for statistically significant I x E interactions at the level of individual analyses. However, point estimates of the effect of the environment on inbreeding depression were sometimes considerable, and we show that variation in the magnitude of the I x E interaction across environments is consistent with the expectation that this interaction is more marked across environmental axes with a closer link to overall fitness, with the environmental dependence of inbreeding depression being elevated under such conditions. Hence, our analyses provide evidence for an environmental dependence of the inbreeding x environment interaction: effectively an I x E x E. CONCLUSIONS/SIGNIFICANCE: Overall, our analyses suggest that I x E interactions may be substantial in wild populations, when measured across relevant environmental contrasts, although their detection for single traits may require very large samples, or high rates of inbreeding.

  5. Morphological traits and inbreeding depression in Bracco Italiano dog breed

    Directory of Open Access Journals (Sweden)

    Francesca Cecchi

    2015-07-01

    Full Text Available This paper reports the first results of a survey on morphological traits in Bracco Italiano dog breed, and analyzes the effects of various levels of inbreeding on these measures. Traits were taken from 155 adult (mean age 4.18±2.60 years dogs (79 males and 76 females belonging to 57 different farms. For each animal, the following biometrical measurements were considered: height at withers (WH, height of chest (ChH, body length (BL, length at rump (RL, height at rump (RH, iliac width of rump (RIlW, ischiatic width of rump (RIsW, circumference of chest (ChC, circumference of cannon (CaC, length of ear (EL, and length of head (HL. The ratio of rump length/withers height (RL/WH, cannon circumference/chest circumference (CaC/ChC and head length/withers height (HL/WH were also calculated. ANOVA was used to test the differences between males and females and among farms in terms of morphological measurements and ratios. Significant differences between males and females were observed for many morphological traits. The measures coincided with what reported in the current breed standard, apart from the length of the rump, which was around ¼ of the withers height rather than the 1/3 required in the standard. No significant effect of inbreeding on conformation traits was observed.

  6. Polyandry facilitates postcopulatory inbreeding avoidance in house mice.

    Science.gov (United States)

    Firman, Renée C; Simmons, Leigh W

    2008-03-01

    The avoidance of genetic incompatibilities between parental genotypes has been proposed to account for the evolution of polyandry. An extension of this hypothesis suggests polyandry may provide an opportunity for females to avoid the cost of inbreeding by exploiting postcopulatory mechanisms that bias paternity toward unrelated male genotypes. Here we test the inbreeding avoidance hypothesis in house mice by experimentally manipulating genetic compatibility via matings between siblings and nonsiblings. We observed little difference in reproductive success between females mated to two siblings or females mated to two nonsiblings. Females mated to both a sibling and a nonsibling tended to have a lower litter survival, but only when the first male to mate was a sibling. Microsatellite data revealed that paternity was biased toward nonsiblings when a female mated with both a sibling and a nonsibling. Unlike previous studies of invertebrates, paternity bias toward the sibling male was independent of mating sequence. We provide one of the first empirical demonstrations that polyandry facilitates postcopulatory sexual selection in a vertebrate. We discuss this result in relation to the possibility of selective fertilization of ova based on major histocompatibility complex (MHC) haploid expression of sperm.

  7. Time course and role of LH and FSH in the expansion of the Leydig cell population at the time of puberty in the rhesus monkey (Macaca mulatta)

    Science.gov (United States)

    Verhagen, I.; Ramaswamy, S.; Teerds, K.J.; Keijer, J.; Plant, T. M.

    2014-01-01

    In higher primates development of the adult population of Leydig cells has received little attention. Here, the emergence of 3β-hydroxysteroid dehydrogenase (HSD3B) positive cells in the testis of the rhesus monkey was examined during spontaneous puberty, and correlated with S-phase labeling in the interstitium at this critical stage of development. In addition, the relative role of LH and FSH in initiating the pubertal expansion of Leydig cells was studied by precociously stimulating the juvenile testis in vivo with pulsatile 11-day infusions of recombinant LH and FSH, either alone or in combination. At the time of castration, testes were immersion fixed in Bouin’s, embedded in paraffin and sectioned at 5 μm. Leydig cells/testis were enumerated using HSD3B as a Leydig cell marker. Leydig cell number per testis increased progressively during puberty to reach values in the adult approximately 10 fold greater than in early pubertal animals. The rise in cell number was associated with an increase in nuclear diameter. That the pubertal expansion of Leydig cell number was driven primarily by the increase in LH secretion at this stage of development was suggested by the finding that precocious stimulation of mid juvenile monkeys with LH, either alone or in combination with that of FSH, resulted in a 20 to 30 fold increase in the number of HSD3B positive cells. Interestingly, precocious FSH stimulation, alone, also resulted in appearance of Leydig cells as indicated by the occasional HSD3B positive cell in the interstitium. The nuclear diameter of these Leydig cells, however was less than that of those generated in response to LH. PMID:25269763

  8. Operant Behavior and Colonic Temperature of Rhesus Monkeys, Macaca mulatta, Exposed to Microwaves at Frequencies above and Near Whole-Body Resonance.

    Science.gov (United States)

    1983-01-01

    this rtudy were handled in accordance with the principles stated in the "Guide for the Care and Use of Laboratory Animals," •,ui Institute of...handled in accordance with the principles stated in the "Guide for the Care and Use of Laboratory Animals," Institute of Laboratory Animal Resources...the manimal was placed into the chamber to when the experimental session was started. A PDP-8A computer in an adjoining room was used to control the

  9. A new method for piercing the tentorium cerebelli for implanting fragile electrodes into the brain stem in the rhesus monkey (Macaca mulatta).

    Science.gov (United States)

    Wu, Jing; Wang, Wenchao; Rizak, Joshua Dominic; Wang, Zhengbo; Wang, Jianhong; Feng, Xiaoli; Dong, Jinrun; Li, Lin; Liu, Li; Xu, Liqi; Yang, Shangchuan; Hu, Xintian

    2014-03-01

    Recent developments in neuron recording techniques include the invention of some fragile electrodes. The fragility of these electrodes impedes their successful use in deep brain recordings because it is difficult to penetrate the electrodes through the dura mater, especially the tentorium cerebelli (TC) enclosing the cerebellum and brain stem. This paper reports a new method to pierce the TC for inserting fragile electrodes into the inferior colliculus of rhesus monkeys. Briefly, a unique tool kit, consisting of needles with sharp tips, a guide tube and an "impactor," was used in a multistep protocol to pierce the TC. The impactor provided a brief force that quickly thrusts the needles through the meninges without causing significant damage to the brain tissue under the TC. Using this novel approach, tetrodes were successfully implanted into the inferior colliculus of a rhesus monkey and neuronal discharge signals were recorded. This method, which is simple, convenient and economical, allows neurophysiologists to study the electrophysiological characteristics of deep brain structures under the TC with advanced, albeit fragile, electrodes.

  10. A fruit in hand is worth many more in the bush: steep spatial discounting by free-ranging rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Kralik, Jerald D; Sampson, William W L

    2012-03-01

    Decision making is one of the principal cognitive processes underlying goal-directed behaviour and thus there is justifiably strong interest in modeling it. However, many of these models have yet to be tested outside of the laboratory. At the same time, field work would benefit from the use of experimental methods developed in the laboratory to determine the causal relationships between environmental variables and behaviour. We therefore adapted a laboratory-derived experimental paradigm to test decision making in the wild. The experiment used an indifference-point procedure to determine the influence of both the amount and distance of food on choice behaviour. Free-ranging rhesus monkeys were given the choice between a smaller amount of food at a closer distance and a larger amount farther away. In four conditions, we held the closer amount constant across trials and varied the farther amount to determine the point at which the monkeys were indifferent to the choice alternatives. For example, in condition one, we used one piece of food at the closer location, and determined how many pieces would be equivalent in the farther location. Four different closer amounts were tested to obtain an indifference point curve, with the indifference amounts at the farther location plotted against the closer amounts. The slope of the obtained linear indifference curve was surprisingly high, suggesting that rhesus monkeys significantly discount food that is farther away. Possible reasons for this steep spatial discounting are discussed.

  11. Looking ahead? Computerized maze task performance by chimpanzees (Pan troglodytes), rhesus monkeys (Macaca mulatta), capuchin monkeys (Cebus apella), and human children (Homo sapiens).

    Science.gov (United States)

    Beran, Michael J; Parrish, Audrey E; Futch, Sara E; Evans, Theodore A; Perdue, Bonnie M

    2015-05-01

    Human and nonhuman primates are not mentally constrained to the present. They can remember the past and-at least to an extent-anticipate the future. Anticipation of the future ranges from long-term prospection such as planning for retirement to more short-term future-oriented cognition such as planning a route through a maze. Here we tested a great ape species (chimpanzees), an Old World monkey species (rhesus macaques), a New World monkey species (capuchin monkeys), and human children on a computerized maze task. All subjects had to move a cursor through a maze to reach a goal at the bottom of the screen. For best performance on the task, subjects had to "plan ahead" to the end of the maze to move the cursor in the correct direction, avoid traps, and reverse directions if necessary. Mazes varied in difficulty. Chimpanzees were better than both monkey species, and monkeys showed a particular deficit when moving away from the goal or changing directions was required. Children showed a similar pattern to monkeys regarding the effects of reversals and moves away from the goal, but their overall performance in terms of correct maze completion was similar to the chimpanzees. The results highlight similarities as well as differences in planning across species and the role that inhibitory control may play in future-oriented cognition in primates.

  12. Procedures for the isolation and culture of Sertoli cells from the testes of infant, juvenile, and adult rhesus monkeys (Macaca mulatta).

    Science.gov (United States)

    Majumdar, S S; Winters, S J; Plant, T M

    1998-03-01

    The purpose of the present study was to establish culture conditions for the in vitro study of the rhesus monkey Sertoli cell (Sc) at three major stages of development, namely infancy, adulthood, and the intervening prepubertal period. Conditions for the culture of Sc from juveniles were first established using collagenase and pancreatin digestion of seminiferous tubules. The addition of 1% fetal bovine serum for the first 24 h of culture was necessary for attachment of Sc clusters. Confluency of Sc from juveniles was reached as early as 4 days of culture. Histochemical and ultrastructural observations confirmed that the cultures were enriched with Sc and that contamination by peritubular cells was minimal (2%). Although application of similar culture conditions was successful in establishing cultures of Sc from infants, significant modification of the procedure was required before Sc from adults could be cultured. Specifically, adult testicular tissue required two sequential collagenase digestions at elevated temperature. The yield of adult Sc, however, remained low. Cultures of juvenile Sc produced substantial quantities of 31-kDa inhibin, which was bioactive as reflected by its ability to suppress FSH secretion from rat pituitary cells in vitro. Although aromatase activity in juvenile Sc cultures was stimulated by FSH, inhibin synthesis, as reflected by immunoactive inhibin production and steady-state levels of alpha inhibin mRNA, was not increased by FSH. The establishment of conditions for the culture of infant, juvenile, and adult Sc from the rhesus monkey will provide a model for study of the postnatal ontogeny of Sc function in higher primates.

  13. Visual Expertise Does Not Predict the Composite Effect across Species: A Comparison between Spider ("Ateles geoffroyi") and Rhesus ("Macaca mulatta") Monkeys

    Science.gov (United States)

    Taubert, Jessica; Parr, Lisa A.

    2009-01-01

    Humans are subject to the composite illusion: two identical top halves of a face are perceived as "different" when they are presented with different bottom halves. This observation suggests that when building a mental representation of a face, the underlying system perceives the whole face, and has difficulty decomposing facial features. We…

  14. Rhesus Monkeys (Macaca Mulatta) Demonstrate Robust Memory for What and Where, but Not When, in an Open-Field Test of Memory

    Science.gov (United States)

    Hampton, R.R.; Hampstead, B.M.; Murray, E.A.

    2005-01-01

    We adapted a paradigm developed by Clayton and Dickinson (1998), who demonstrated memory for what, where, and when in scrub jays, for use with rhesus monkeys. In the study phase of each trial, monkeys found a preferred and a less-preferred food reward in a trial-unique array of three locations in a large room. After 1h, monkeys returned to the…

  15. Localization of [3H]nicotine, [3H]cytisine, [3H]epibatidine, and [125I]alpha-bungarotoxin binding sites in the brain of Macaca mulatta.

    Science.gov (United States)

    Han, Zhi-Yan; Zoli, Michele; Cardona, Ana; Bourgeois, Jean-Pierre; Changeux, Jean-Pierre; Le Novère, Nicolas

    2003-06-16

    We determined the localization of [(3)H]nicotine, [(3)H]cytisine, [(3)H]epibatidine, and [(125)I]alpha-bungarotoxin binding sites in the brain of rhesus monkey by means of receptor autoradiography. The labelings by [(3)H]nicotine, [(3)H]cytisine, and [(3)H]epibatidine were highly concordant, except for epibatidine. Layer IV of some cortical areas, most thalamic nuclei, and presubiculum displayed high levels of labeling for the three ligands. Moderate levels of binding were detected in the subiculum, the septum, and the mesencephalon. Low levels were present in layers I-II and VI of the cortex, the cornu Ammonis, the dentate gyrus, and the amygdala. In addition, the level of epibatidine labeling was very high in the epithalamic nuclei and the interpeduncular nucleus, whereas labeling by nicotine and cytisine was very weak in the same regions. The distribution of [(125)I]alpha-bungarotoxin binding differed from the binding of the three agonists. The labeling was dense in layer I of most cortical areas, dentate gyrus, stratum lacunosum-moleculare of CA1 field, several thalamic nuclei, and medial habenula. A moderate labeling was found in layers V and VI of the prefrontal and frontal cortices, layer IV of primary visual cortex, amygdala, septum, hypothalamus, and some mesencenphalic nuclei. A weak signal was also detected in subiculum, claustrum, stratum oriens, and stratum lucidum of cornu Ammonis and also in some mesencephalic nuclei. The distribution of nicotine, cytisine, and epibatidine bindings corresponds broadly to the patterns observed in rodents, with the marked exception of the epithalamus. However, in monkey, those distributions match the distribution of alpha2 messenger RNA, rather than that of alpha4 transcripts as it exists in rodent brains. The distribution of the binding sites for alpha-bungarotoxin is larger in the brain of rhesus monkeys than in rodent brain, suggesting a more important role of alpha7 receptors in primates.

  16. Expression and Distribution of Glucagon-Like Peptide-1 Receptor mRNA, Protein and Binding in the Male Nonhuman Primate (Macaca mulatta) Brain

    OpenAIRE

    2014-01-01

    Glucagon-like peptide-1 (GLP-1) is released from endocrine L-cells lining the gut in response to food ingestion. However, GLP-1 is also produced in the nucleus of the solitary tract, where it acts as an anorectic neurotransmitter and key regulator of many autonomic and neuroendocrine functions. The expression and projections of GLP-1-producing neurons is highly conserved between rodent and primate brain, although a few key differences have been identified. The GLP-1 receptor (GLP-1R) has been...

  17. Refining the Pole-and-Collar Method of Restraint: Emphasizing the Use of Positive Training Techniques with Rhesus Macaques (Macaca mulatta)

    OpenAIRE

    McMillan, Jennifer L; Perlman, Jaine E; Galvan, Adriana; Wichmann, Thomas; Bloomsmith, Mollie A

    2014-01-01

    The pole-and-collar method is one of several techniques that enable the safe transfer of a nonhuman primate from its home environment into a restraint chair without the need for sedation. It has been used within the scientific community for decades. Traditional methods to train animals for pole-and-collar use rely primarily on aspects of negative reinforcement, with very little incorporation of positive-reinforcement techniques. With increasing emphasis on animal training and welfare, researc...

  18. Safety and colonization of two novel VirG(IcsA)-based live Shigella sonnei vaccine strains in rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Collins, Todd A; Barnoy, Shoshana; Baqar, Shahida; Ranallo, Ryan T; Nemelka, Kevin W; Venkatesan, Malabi M

    2008-02-01

    Shigella are gram-negative bacterium that cause bacillary dysentery (shigellosis). Symptoms include diarrhea and discharge of bloody mucoid stools, accompanied by severe abdominal pain, nausea, vomiting, malaise, and fever. Persons traveling to regions with poor sanitation and crowded conditions become particularly susceptible to shigellosis. Currently a vaccine for Shigella has not been licensed in the United States, and the organism quickly becomes resistant to medications. During the past 10 y, several live attenuated oral Shigella vaccines, including the strain WRSS1, have been tested in humans with considerable success. These Phase I vaccines lack the gene for the protein VirG also known as IcsA, which enables the organism to disseminate in the host target tissue. However, 5% to 20% of the vaccinated volunteers developed mild fever and brief diarrhea, and the removal of additional virulence-associated genes from the vaccine strain may reduce or eliminate these side effects. We administered 2 Shigella sonnei vaccines, WRSs2 and WRSs3, along with WRSS1 to compare their rates of colonization and clinical safety in groups of 5 rhesus macaques. The primate model provides the most physiologically relevant animal system to test the validity and efficacy of vaccine candidates. In this pilot study using a gastrointestinal model of infection, the vaccine candidates WRSs2 and WRSs3, which have additional deletions in the enterotoxin and LPS modification genes, provided better safety and comparable immunogenicity to those of WRSS1.

  19. The use of Aotus Trivirgatus and Macaca Mulatta as Tools for Studies on Prevention and Therapy of Infections with Plasmodium Falciparum and Plasmodium Vivax

    Science.gov (United States)

    1976-08-13

    ily three new agents were examined for blood schizonticidal activity. One of these, WR-226, 253, a quino - linemethanol, exhibited activity equal...schizonticidal activity. One of these, WR-226, 253, a quino - linemethanol, exhibited activity equal to or surpassing that of WR-142, 490 (mefloquine...promising quino - linemethanols (cf Figure 1). These features, coupled with demonstrable activity against infections with trophozoites of the B

  20. Toxicity and disposition of 2,3,4,7,8-pentachlorodibenzofuran (4PeCDF) in the rhesus monkey (Macaca mulatta)

    Energy Technology Data Exchange (ETDEWEB)

    Brewster, D.W.; Elwell, M.R.; Birnbaum, L.S.

    1988-04-01

    The toxicity and disposition of 2,3,4,7,8-pentachlorodibenzofuran (4PeCDF), a ubiquitous and acutely toxic environmental contaminant, was examined in three adult male Rhesus monkeys administered a single iv dose of 34 micrograms (0.1 mumol)/kg. Within 20 min, 4PeCDF was eliminated from the blood and was distributed to the liver, skin, adipose, and muscle tissues. Excretion occurred primarily via the feces with a minimum whole body half-life approximately 38 days. Within 7-14 days after administration, the packed cell volume and serum triglyceride and bile acid concentrations were significantly increased while serum cholesterol, protein, and albumin concentrations were decreased relative to pretreatment levels. Thyroid hormone levels were also altered with an increase in TSH and a decrease in T3 and T4 concentrations. After 28 days, two monkeys began exhibiting alopecia, hyperkeratinization of the toe and finger nails, facial chloracne-like lesions, and loss of body weight. They subsequently died 40 and 48 days after treatment. Similar symptoms of toxicity were observed in the third animal 58 days after 4PeCDF administration, but this animal appeared to fully recover and was administered 4PeCDF orally and (3H)1,2,3,7,8-pentachloro-dibenzofuran (1PeCDF) dermally 238 days after the initial iv dose. In this animal, approximately 2% of an oral dose of (14C)-4PeCDF was absorbed from the stomach and small intestine in 6 hr and was distributed mainly to the muscle and skin and less than 99% of a dermal dose of 1PeCDF remained at the site of application. Pathological findings in the monkeys that died indicated hyperplastic and metaplastic changes in the gastric mucosa, the Meibomian glands of the eyelid, and the ceruminous glands of the ear. Regression of these lesions was present in the surviving animal.

  1. Analysis of founder-specific inbreeding depression on birth weight in Ripollesa lambs.

    Science.gov (United States)

    Casellas, J; Piedrafita, J; Caja, G; Varona, L

    2009-01-01

    Although inbreeding (F) is a topic of major concern in animal breeding, estimates of inbreeding depression are usually obtained by modeling the overall F coefficient of each individual, without considering that the recessive (deleterious) genetic load of a given population may be unevenly distributed among the founder genomes. The founder-specific partial F coefficient is calculated as the identity-by-descent probability at any given autosomal locus related to a particular founder and allows a more detailed analysis of inbreeding depression on productive traits. Within this context, birth BW data from 2,459 Ripollesa lambs were analyzed under a hierarchical animal model without F-related covariates (model 0), with inbreeding depression modeled by the overall F coefficient (model F1), or by the partial F coefficient of 9 founders that made a relevant contribution to the population inbreeding (model F2). A straightforward empirical Bayes factor (BF) was developed for testing statistical relevance of each F-related covariate, in which greater-than-1 values favored the model including the covariate. The deviance information criterion (DIC) clearly supported model F1 (5,767.8) rather than model 0 (5,771.2), suggesting that inbreeding depression had a relevant influence on birth BW data. The linear effect of inbreeding depression was statistically relevant in model F1 (BF = 2.52 x 10(35)), with lamb birth BW declining by -13.6 g with each 1% F increase. The quadratic effect of inbreeding depression was almost null in model F1 (BF = 0.02), as suggested by the reduction in DIC (5,766.9) when this effect was removed from model F1. On the other hand, model F2 provided a similar DIC (5,767.9) value, with this parameter decreasing to 5,764.7 when nonrelevant founder-specific inbreeding depression effects were removed. Substantial heterogeneity in founder-specific inbreeding depression was reported by model F2, in which estimates for 4 of the 9 founders did not differ from zero

  2. A major QTL affects temperature sensitive adult lethality and inbreeding depression in life span in Drosophila melanogaster.

    DEFF Research Database (Denmark)

    Vermeulen, Corneel J.; Bijlsma, R.; Loeschcke, Volker

    2008-01-01

    Background The study of inbreeding depression has major relevance for many disciplines, including conservation genetics and evolutionary biology. Still, the molecular genetic basis of this phenomenon remains poorly characterised, as knowledge on the mechanistic causes of inbreeding depression...... and the molecular properties of genes that give rise to or modulate its deleterious effects is lacking. These questions warrant the detailed study of genetic loci giving rise to inbreeding depression. However, the complex and polygenic nature of general inbreeding depression makes this a daunting task. Study...... This demonstrates that analysis of large conditional lethal effects is a viable strategy for delineating genes which are sensitive to inbreeding depression....

  3. Comparison of the Effects of Ketamine, Ketamine–Medetomidine, and Ketamine–Midazolam on Physiologic Parameters and Anesthesia-Induced Stress in Rhesus (Macaca mulatta) and Cynomolgus (Macaca fascicularis) Macaques

    OpenAIRE

    Lee, Vanessa K; Flynt, Kendall S; Haag, Lauren M; Taylor, Douglas K.

    2010-01-01

    This study compared the cardiovascular, respiratory, anesthetic, and glucocorticoid effects of ketamine alone with ketamine–medetomidine and ketamine–midazolam in rhesus and cynomolgus macaques. Macaques were given either intramuscular ketamine (10 mg/kg), intramuscular ketamine–medetomidine (3 mg/kg; 0.15 mg/kg), or oral midazolam (1 mg/kg) followed by intramuscular ketamine (8 mg/kg). The addition of medetomidine, but not midazolam, provided muscle relaxation and abolishment of reflexes tha...

  4. Effects of inbreeding on reproductive success, performance, litter size, and survival in captive red wolves (Canis rufus).

    Science.gov (United States)

    Rabon, David R; Waddell, William

    2010-01-01

    Captive-breeding programs have been widely used in the conservation of imperiled species, but the effects of inbreeding, frequently expressed in traits related to fitness, are nearly unavoidable in small populations with few founders. Following its planned extirpation in the wild, the endangered red wolf (Canis rufus) was preserved in captivity with just 14 founders. In this study, we evaluated the captive red wolf population for relationships between inbreeding and reproductive performance and fitness. Over 30 years of managed breeding, the level of inbreeding in the captive population has increased, and litter size has declined. Inbreeding levels were lower in sire and dam wolves that reproduced than in those that did not reproduce. However, there was no difference in the inbreeding level of actual litters and predicted litters. Litter size was negatively affected by offspring and paternal levels of inbreeding, but the effect of inbreeding on offspring survival was restricted to a positive influence. There was no apparent relationship between inbreeding and method of rearing offspring. The observable effects of inbreeding in the captive red wolf population currently do not appear to be a limiting factor in the conservation of the red wolf population. Additional studies exploring the extent of the effects of inbreeding will be required as inbreeding levels increase in the captive population.

  5. Inbreeding depression on beef cattle traits: estimates, linearity of effects and heterogeneity among sire-families.

    Science.gov (United States)

    Carolino, Nuno; Gama, Luis T

    2008-01-01

    Records from up to 19 054 registered cows and 10 297 calves in 155 herds of the Alentejana cattle breed were used to study the effects of individual (Fi) and maternal (Fm) inbreeding on reproductive, growth and carcass traits, as well as assessing the importance of non-linear associations between inbreeding and performance, and evaluating the differences among sire-families in the effect of Fi and Fm on calf weight at 7 months of age (W7M). Overall, regression coefficients of performance traits on inbreeding were small, indicating a minor but still detrimental effect of both Fi and Fm on most traits. The traits with the highest percentage impact of Fi were total number of calvings through life and calf weight at 3 months of age (W3M), followed by longevity and number of calves produced up to 7 years, while the highest effect of Fm was on W3M. Inbreeding depression on feed efficiency and carcass traits was extremely small and not significant. No evidence was found of a non-linear association between inbreeding and performance for the traits analyzed. Large differences were detected among sire-families in inbreeding depression on W7M, for both Fi and Fm, encouraging the possibility of incorporating sire effects on inbreeding depression into selection decisions.

  6. Inbreeding depresses sperm competitiveness, but not fertilization or mating success in male Tribolium castaneum

    Science.gov (United States)

    Michalczyk, Łukasz; Martin, Oliver Y.; Millard, Anna L.; Emerson, Brent C.; Gage, Matthew J. G.

    2010-01-01

    As populations decline to levels where reproduction among close genetic relatives becomes more probable, subsequent increases in homozygous recessive deleterious expression and/or loss of heterozygote advantage can lead to inbreeding depression. Here, we measure how inbreeding across replicate lines of the flour beetle Tribolium castaneum impacts on male reproductive fitness in the absence or presence of male–male competition. Effects on male evolution from mating pattern were removed by enforcing monogamous mating throughout. After inbreeding across eight generations, we found that male fertility in the absence of competition was unaffected. However, we found significant inbreeding depression of sperm competitiveness: non-inbred males won 57 per cent of fertilizations in competition, while inbred equivalents only sired 42 per cent. We also found that the P2 ‘offence’ role in sperm competition was significantly more depressed under inbreeding than sperm ‘defence’ (P1). Mating behaviour did not explain these differences, and there was no difference in the viability of offspring sired by inbred or non-inbred males. Sperm length variation was significantly greater in the ejaculates of inbred males. Our results show that male ability to achieve normal fertilization success was not depressed under strong inbreeding, but that inbreeding depression in these traits occurred when conditions of sperm competition were generated. PMID:20554548

  7. Effect of inbreeding on the incidence of retained placenta in Friesian horses.

    Science.gov (United States)

    Sevinga, M; Vrijenhoek, T; Hesselinks, J W; Barkema, H W; Groen, A F

    2004-04-01

    This study was motivated by the hypothesis that the incidence of retained placenta (RP) in Friesian horses is associated with inbreeding. The objectives were to 1) calculate the inbreeding rate in the total registered Friesian horse population; 2) study the association of the inbreeding coefficient of the foal and the mare with the incidence of RP; and 3) study the heritability of RP in Friesian mares after normal foalings. Data from the total registered Friesian horse population from 1879 to 2000 (52,392 individuals) were collected from the registration files of the Friesian Horse Studbook. In 1999 and 2000, 495 parturitions in 436 mares were studied. From 1979 to 2000, the inbreeding rate of the total population was 1.9% per generation. The regression coefficients for the regression of the incidence of RP on inbreeding coefficients of the foal and the mare were 0.12 +/- 0.052 and -0.016 +/- 0.019, respectively. Mean heritability estimates of RP as a foal trait and as a mare trait were 0.046 +/- 0.088 and 0.105 +/- 0.123, respectively. It was concluded that, in order to avoid a further increase in the incidence of RP in Friesian mares, a decrease in the inbreeding rate by increasing the effective breeding population is required. Furthermore, the findings indicate that the high incidence of RP in Friesian horses is at least partly a result of inbreeding.

  8. The effect of inbreeding on natural selection in a seed-feeding beetle.

    Science.gov (United States)

    Fox, C W

    2013-01-01

    Little is known about how inbreeding alters selection on ecologically relevant traits. Inbreeding could affect selection by changing the distribution of traits and/or fitness, or by changing the causal effect of traits on fitness. Here, I test whether selection on egg size varies with the degree of inbreeding in the seed-feeding beetle, Stator limbatus. There was strong directional selection favoring large eggs for both inbred and outbred beetles; offspring from smaller eggs had lower survivorship on a resistant host. Inbreeding treatment had no effect on the magnitude of selection on egg size; all selection coefficients were between ~0.078 and 0.096, regardless of treatment. However, inbreeding depression declined with egg size; this is because the difference in fitness between inbreds and outbreds did not change, but average fitness increased, with egg size. A consequence of this is that populations that differ in mean egg size should experience different magnitudes of inbreeding depression (all else being equal) and thus should differ in the magnitude of selection on traits that affect mating, simply as a consequence of variation in egg size. Also, maternal traits (such as egg size) that mediate stressfulness of the environment for offspring can mediate the severity of inbreeding depression.

  9. Inbreeding depression in two seed-feeding beetles, Callosobruchus maculatus and Stator limbatus (Coleoptera: Chrysomelidae).

    Science.gov (United States)

    Fox, C W; Scheibly, K L; Smith, B P; Wallin, W G

    2007-02-01

    Inbreeding depression is well documented in insects but the degree to which inbreeding depression varies among populations within species, and among traits within populations, is poorly studied in insects other than Drosophila. Inbreeding depression was examined in two long-term laboratory colonies of the seed beetle, Callosobruchus maculatus (Fabricius), which are used frequently as models for experiments in ecology, evolution and behaviour. Inbreeding depression in these laboratory colonies are compared with one recently field-collected population of a different seed beetle, Stator limbatus Horn. Inbreeding reduced embryogenesis, egg hatch and larval survival in both species, such that eggs produced by sib matings were >17% less likely to produce an adult offspring. Inbred larvae also took 4-6% longer to develop to emergence in both species. Inbreeding depression varied among the measured traits but did not differ between the two populations of C. maculatus for any trait, despite the large geographic distance between source populations (western Africa vs. southern India). Inbreeding depression was similar in magnitude between C. maculatus and S. limbatus. This study demonstrates that these laboratory populations of C. maculatus harbour substantial genetic loads, similar to the genetic load of populations of S. limbatus recently collected from the field.

  10. Effects of inbreeding on potential and realized immune responses in Tenebrio molitor.

    Science.gov (United States)

    Rantala, Markus J; Viitaniemi, Heidi; Roff, Derek A

    2011-06-01

    Although numerous studies on vertebrates suggest that inbreeding reduces their resistance against parasites and pathogens, studies in insects have found contradictory evidence. In this study we tested the effect of 1 generation of brother-sister mating (inbreeding) on potential and realized immune responses and other life-history traits in Tenebrio molitor. We found that inbreeding reduced adult mass, pre-adult survival and increased development time, suggesting that inbreeding reduced the condition of the adults and thus potentially made them more susceptible to physiological stress. However, we found no significant effect of inbreeding on the potential immune response (encapsulation response), but inbreeding reduced the realized immune response (resistance against the entomopathogenic fungi, Beauveria bassiana). There was a significant family effect on encapsulation response, but no family effect on the resistance against the entomopathogenic fungi. Given that this latter trait showed significant inbreeding depression and that the sample size for the family-effect analysis was small it is likely that the lack of a significant family effect is due to reduced statistical power, rather than the lack of a heritable basis to the trait. Our study highlights the importance of using pathogens and parasites in immunoecological studies.

  11. Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds

    DEFF Research Database (Denmark)

    Zhang, Qianqian; Calus, Mario P L; Guldbrandtsen, Bernt;

    2015-01-01

    Background: Levels of inbreeding in cattle populations have increased in the past due to the use of a limited number of bulls for artificial insemination. High levels of inbreeding lead to reduced genetic diversity and inbreeding depression. Various estimators based on different sources, e.......g., pedigree or genomic data, have been used to estimate inbreeding coefficients in cattle populations. However, the comparative advantage of using full sequence data to assess inbreeding is unknown. We used pedigree and genomic data at different densities from 50k to full sequence variants to compare how......); genomic relationship matrix (GRM)-based inbreeding coefficients (FGRM); inbreeding coefficients based on excess of homozygosity (FHOM) and correlation of uniting gametes (FUNI). Estimates using ROH provided the direct estimated levels of autozygosity in the current populations and are free effects...

  12. Understanding and predicting the fitness decline of shrunk populations: inbreeding, purging, mutation, and standard selection.

    Science.gov (United States)

    García-Dorado, Aurora

    2012-04-01

    The joint consequences of inbreeding, natural selection, and deleterious mutation on mean fitness after population shrinkage are of great importance in evolution and can be critical to the conservation of endangered populations. I present simple analytical equations that predict these consequences, improving and extending a previous heuristic treatment. Purge is defined as the "extra" selection induced by inbreeding, due to the "extra" fitness disadvantage (2d) of homozygotes for (partially) recessive deleterious alleles. Its effect is accounted for by using, instead of the classical inbreeding coefficient f, a purged inbreeding coefficient g that is weighed by the reduction of the frequency of deleterious alleles caused by purging. When the effective size of a large population is reduced to a smaller stable value N (with Nd ≥ 1), the purged inbreeding coefficient after t generations can be predicted as g(t) ≈ [(1 - 1/2N) g(t)(-1) + 1/2N](1 - 2d f(t)(-1)), showing how purging acts upon previously accumulated inbreeding and how its efficiency increases with N. This implies an early fitness decay, followed by some recovery. During this process, the inbreeding depression rate shifts from its ancestral value (δ) to that of the mutation-selection-drift balance corresponding to N (δ*), and standard selection cancels out the inbreeding depression ascribed to δ*. Therefore, purge and inbreeding operate only upon the remaining δ - δ*. The method is applied to the conservation strategy in which family contributions to the breeding pool are equal and is extended to make use of genealogical information. All these predictions are checked using computer simulation.

  13. The role of inbreeding in the extinction of a European royal dynasty.

    Directory of Open Access Journals (Sweden)

    Gonzalo Alvarez

    Full Text Available The kings of the Spanish Habsburg dynasty (1516-1700 frequently married close relatives in such a way that uncle-niece, first cousins and other consanguineous unions were prevalent in that dynasty. In the historical literature, it has been suggested that inbreeding was a major cause responsible for the extinction of the dynasty when the king Charles II, physically and mentally disabled, died in 1700 and no children were born from his two marriages, but this hypothesis has not been examined from a genetic perspective. In this article, this hypothesis is checked by computing the inbreeding coefficient (F of the Spanish Habsburg kings from an extended pedigree up to 16 generations in depth and involving more than 3,000 individuals. The inbreeding coefficient of the Spanish Habsburg kings increased strongly along generations from 0.025 for king Philip I, the founder of the dynasty, to 0.254 for Charles II and several members of the dynasty had inbreeding coefficients higher than 0.20. In addition to inbreeding due to unions between close relatives, ancestral inbreeding from multiple remote ancestors makes a substantial contribution to the inbreeding coefficient of most kings. A statistically significant inbreeding depression for survival to 10 years is detected in the progenies of the Spanish Habsburg kings. The results indicate that inbreeding at the level of first cousin (F = 0.0625 exerted an adverse effect on survival of 17.8%+/-12.3. It is speculated that the simultaneous occurrence in Charles II (F = 0.254 of two different genetic disorders: combined pituitary hormone deficiency and distal renal tubular acidosis, determined by recessive alleles at two unlinked loci, could explain most of the complex clinical profile of this king, including his impotence/infertility which in last instance led to the extinction of the dynasty.

  14. The role of inbreeding in the extinction of a European royal dynasty.

    Science.gov (United States)

    Alvarez, Gonzalo; Ceballos, Francisco C; Quinteiro, Celsa

    2009-01-01

    The kings of the Spanish Habsburg dynasty (1516-1700) frequently married close relatives in such a way that uncle-niece, first cousins and other consanguineous unions were prevalent in that dynasty. In the historical literature, it has been suggested that inbreeding was a major cause responsible for the extinction of the dynasty when the king Charles II, physically and mentally disabled, died in 1700 and no children were born from his two marriages, but this hypothesis has not been examined from a genetic perspective. In this article, this hypothesis is checked by computing the inbreeding coefficient (F) of the Spanish Habsburg kings from an extended pedigree up to 16 generations in depth and involving more than 3,000 individuals. The inbreeding coefficient of the Spanish Habsburg kings increased strongly along generations from 0.025 for king Philip I, the founder of the dynasty, to 0.254 for Charles II and several members of the dynasty had inbreeding coefficients higher than 0.20. In addition to inbreeding due to unions between close relatives, ancestral inbreeding from multiple remote ancestors makes a substantial contribution to the inbreeding coefficient of most kings. A statistically significant inbreeding depression for survival to 10 years is detected in the progenies of the Spanish Habsburg kings. The results indicate that inbreeding at the level of first cousin (F = 0.0625) exerted an adverse effect on survival of 17.8%+/-12.3. It is speculated that the simultaneous occurrence in Charles II (F = 0.254) of two different genetic disorders: combined pituitary hormone deficiency and distal renal tubular acidosis, determined by recessive alleles at two unlinked loci, could explain most of the complex clinical profile of this king, including his impotence/infertility which in last instance led to the extinction of the dynasty.

  15. [A variance-covariance model for analysis of pedigrees with inbreeding].

    Science.gov (United States)

    Svishcheva, G R

    2007-08-01

    A variance-covariance model is suggested for plotting the distribution of a quantitative trait analyzed in animal pedigrees resulting from crosses of outbred lines. The model takes inbreeding into account. A special parameter characterizing the degree of inbreeding has been introduced, which makes the model versatile. Pedigrees with the same structure that contain or not contain inbred individuals have been compared to analyze the effect of inbreeding on the parameters of the trait distribution, such as the mean genotypic value and variance of the trait.

  16. Habitat fragmentation, climate change, and inbreeding in plants.

    Science.gov (United States)

    Leimu, Roosa; Vergeer, Philippine; Angeloni, Francesco; Ouborg, N Joop

    2010-05-01

    Habitat fragmentation and climate change are recognized as major threats to biodiversity. The major challenge for present day plant populations is how to adapt and cope with altered abiotic and biotic environments caused by climate change, when at the same time adaptive and evolutionary potential is decreased as habitat fragmentation reduces genetic variation and increases inbreeding. Although the ecological and evolutionary effects of fragmentation and climate change have been investigated separately, their combined effects remained largely unexplored. In this review, we will discuss the individual and joint effects of habitat fragmentation and climate change on plants and how the abilities and ways in which plants can respond and cope with climate change may be compromised due to habitat fragmentation.

  17. NCBI nr-aa BLAST: CBRC-SARA-01-1167 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-SARA-01-1167 ref|XP_001105680.1| PREDICTED: similar to adiponectin receptor 1 ...isoform 3 [Macaca mulatta] ref|XP_001105751.1| PREDICTED: similar to adiponectin receptor 1 isoform 4 [Macac...a mulatta] ref|XP_001105805.1| PREDICTED: similar to adiponectin receptor 1 isoform 5 [Macaca mulatta] ref|X...P_001105878.1| PREDICTED: similar to adiponectin receptor 1 isoform 6 [Macaca mul...atta] ref|XP_001105957.1| PREDICTED: similar to adiponectin receptor 1 isoform 7 [Macaca mulatta] XP_001105680.1 1e-138 67% ...

  18. NCBI nr-aa BLAST: CBRC-OGAR-01-1050 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-OGAR-01-1050 ref|XP_001105680.1| PREDICTED: similar to adiponectin receptor 1 ...isoform 3 [Macaca mulatta] ref|XP_001105751.1| PREDICTED: similar to adiponectin receptor 1 isoform 4 [Macac...a mulatta] ref|XP_001105805.1| PREDICTED: similar to adiponectin receptor 1 isoform 5 [Macaca mulatta] ref|X...P_001105878.1| PREDICTED: similar to adiponectin receptor 1 isoform 6 [Macaca mul...atta] ref|XP_001105957.1| PREDICTED: similar to adiponectin receptor 1 isoform 7 [Macaca mulatta] XP_001105680.1 0.0 92% ...

  19. NCBI nr-aa BLAST: CBRC-SARA-01-0259 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-SARA-01-0259 ref|XP_001107503.1| PREDICTED: tubulin, alpha, ubiquitous isoform... 10 [Macaca mulatta] ref|XP_001107562.1| PREDICTED: tubulin, alpha, ubiquitous isoform 11 [Macaca mulatta] r...ef|XP_001107624.1| PREDICTED: tubulin, alpha, ubiquitous isoform 12 [Macaca mulatta] ref|XP_001107684.1| PRE...| PREDICTED: tubulin, alpha, ubiquitous isoform 14 [Macaca mulatta] ref|XP_001107805.1| PREDICTED: tubulin, alpha, ubiquitous... isoform 15 [Macaca mulatta] ref|XP_001107870.1| PREDICTED: tubulin, alpha, ubiquitous isof

  20. Recent breeding history of dog breeds in Sweden: modest rates of inbreeding, extensive loss of genetic diversity and lack of correlation between inbreeding and health.

    Science.gov (United States)

    Jansson, M; Laikre, L

    2014-04-01

    One problem in modern dogs is a high occurrence of physical diseases, defects and disorders. Many breeds exhibit physical problems that affect individual dogs throughout life. A potential cause of these problems is inbreeding that is known to reduce the viability of individuals. We investigated the possible correlation between recent inbreeding and health problems in dogs and used studbook data from 26 breeds provided by the Swedish Kennel Club for this purpose. The pedigrees date back to the mid-20th century and comprise 5-10 generations and 1 000-50 000 individuals per pedigree over our study period of 1980-2010. We compared levels of inbreeding and loss of genetic variation measured in relation to the number of founding animals during this period in the investigated dog breeds that we classified as 'healthy' (11 breeds) or 'unhealthy' (15) based on statistics on the extent of veterinary care obtained from Sweden's four largest insurance companies for pets. We found extensive loss of genetic variation and moderate levels of recent inbreeding in all breeds examined, but no strong indication of a difference in these parameters between healthy versus unhealthy breeds over this period. Thus, recent breeding history with respect to rate of inbreeding does not appear to be a main cause of poor health in the investigated dog breeds in Sweden. We identified both strengths and weaknesses of the dog pedigree data important to consider in future work of monitoring and conserving genetic diversity of dog breeds.

  1. Metabolomic Signatures of Inbreeding at Benign and Stressful Temperatures in Drosophila melanogaster

    DEFF Research Database (Denmark)

    Pedersen, Kamilla Sofie; Kristensen, Torsten Nygård; Loeschcke, Volker

    2008-01-01

    at the benign temperature was related to gene expression data from the same inbred and outbred lines. Both gene expression and metabolite data indicate that fundamental metabolic processes are changed or modified by inbreeding. Apart from affecting mean metabolite levels, inbreeding led to an increased between...... and five inbred lines were studied by nuclear magnetic resonance spectroscopy after exposure to benign temperature, heat stress, or cold stress. In both the absence and the presence of temperature stress, metabolite levels were significantly different among inbred and outbred lines. The major effect......-line variation in metabolite profiles compared to outbred lines. In contrast to previous observations revealing interactions between inbreeding and environmental stress on gene expression patterns and life-history traits, the effect of inbreeding on the metabolite profile was similar across the different...

  2. Demographic consequences of inbreeding and outbreeding in Arnica montana: a field experiment.

    NARCIS (Netherlands)

    Luijten, S.H.; Kery, M.; Oostermeijer, J.G.B.; den Nijs, J.C.M.

    2002-01-01

    1. The genetic constitution of populations may significantly affect demography. Founder populations or isolated remnants may show inbreeding depression, while established populations can be strongly adapted to the local environment. Gene exchange between populations can lead to better performance if

  3. The Self-Regulation Effect of Fertility Status on Inbreeding Aversion: When Fertile, Disgust Increases more in Response to Descriptions of One's Own than of Others' Inbreeding

    Directory of Open Access Journals (Sweden)

    Jan Antfolk

    2014-07-01

    Full Text Available The ovulatory shift modulates emotions related to female sexuality. Because fertility status only affects the individual's own opportunity cost, the adaptive value of this shift is expected to stem from self-regulation. To test this assumption we asked women to contemplate various inbreeding descriptions: 1 they themselves having sex with male relatives; 2 their sister having sex with their common male relatives; and 3 an unrelated woman having sex with her male relatives (in 1, but not 2 and 3, negative fitness consequences are affected by the participant's fertility. We dichotomized the dependent variable disgust (ceiling vs. non-ceiling and analyzed the interaction between fertility status and description type. The ovulatory shift was stronger in descriptions where they themselves were described as engaging in inbreeding. A smaller increase was also found in reactions to others engaging in inbreeding. We explain the latter effect as due to self-reflection.

  4. Effects of inbreeding and temperature stress on life history and immune function in a butterfly.

    Science.gov (United States)

    Franke, K; Fischer, K

    2013-03-01

    Theory predicts that inbreeding depression should be more pronounced under environmental stress due to an increase in the expression of recessive deleterious alleles. If so, inbred populations may be especially vulnerable to environmental change. Against this background, we here investigate effects of inbreeding, temperature stress and its interactions with inbreeding in the tropical butterfly Bicyclus anynana. We use a full-factorial design with three levels of inbreeding (F = 0/0.25/0.38) and three temperature treatments (2 h exposure to 1, 27 or 39 °C). Despite using relatively low levels of inbreeding significant inbreeding depression was found in pupal mass, pupal time, thorax mass, abdomen fat content, egg hatching success and fecundity. However, stress resistance traits (heat tolerance, immune function) were not affected by inbreeding and interactions with temperature treatments were virtually absent. We thus found no support for an increased sensitivity of inbred individuals to environmental stress, and suspect that such patterns are restricted to harsher conditions. Our temperature treatments evidently imposed stress, significantly reducing longevity, fecundity, egg hatching success and haemocyte numbers, while fat content, protein content and lysozyme activity remained unaffected. Males and females differed in all traits measured except pupal time, protein content and phenoloxidase (PO) activity. Correlation analyses revealed, among others, a trade-off between PO and lysozyme activity, and negative correlations between fat content and several other traits. We stress that more data are needed on the effects of inbreeding, temperature variation and sexual differences on insect immune function before more general conclusions can be drawn. © 2012 The Authors. Journal of Evolutionary Biology © 2012 European Society For Evolutionary Biology.

  5. Better Fitness in Captive Cuvier's Gazelle despite Inbreeding Increase: Evidence of Purging?

    Science.gov (United States)

    Moreno, Eulalia; Pérez-González, Javier; Carranza, Juan; Moya-Laraño, Jordi

    2015-01-01

    Captive breeding of endangered species often aims at preserving genetic diversity and to avoid the harmful effects of inbreeding. However, deleterious alleles causing inbreeding depression can be purged when inbreeding persists over several generations. Despite its great importance both for evolutionary biology and for captive breeding programmes, few studies have addressed whether and to which extent purging may occur. Here we undertake a longitudinal study with the largest captive population of Cuvier's gazelle managed under a European Endangered Species Programme since 1975. Previous results in this population have shown that highly inbred mothers tend to produce more daughters, and this fact was used in 2006 to reach a more appropriate sex-ratio in this polygynous species by changing the pairing strategy (i.e., pairing some inbred females instead of keeping them as surplus individuals in the population). Here, by using studbook data we explore whether purging has occurred in the population by investigating whether after the change in pairing strategy a) inbreeding and homozygosity increased at the population level, b) fitness (survival) increased, and c) the relationship between inbreeding and juvenile survival, was positive. Consistent with the existence of purging, we found an increase in inbreeding coefficients, homozygosity and juvenile survival. In addition, we showed that in the course of the breeding programme the relationship between inbreeding and juvenile survival was not uniform but rather changed over time: it was negative in the early years, flat in the middle years and positive after the change in pairing strategy. We highlight that by allowing inbred individuals to mate in captive stocks we may favour sex-ratio bias towards females, a desirable managing strategy to reduce the surplus of males that force most zoos to use ethical culling and euthanizing management tools. We discuss these possibilities but also acknowledge that many other effects

  6. Better Fitness in Captive Cuvier's Gazelle despite Inbreeding Increase: Evidence of Purging?

    Directory of Open Access Journals (Sweden)

    Eulalia Moreno

    Full Text Available Captive breeding of endangered species often aims at preserving genetic diversity and to avoid the harmful effects of inbreeding. However, deleterious alleles causing inbreeding depression can be purged when inbreeding persists over several generations. Despite its great importance both for evolutionary biology and for captive breeding programmes, few studies have addressed whether and to which extent purging may occur. Here we undertake a longitudinal study with the largest captive population of Cuvier's gazelle managed under a European Endangered Species Programme since 1975. Previous results in this population have shown that highly inbred mothers tend to produce more daughters, and this fact was used in 2006 to reach a more appropriate sex-ratio in this polygynous species by changing the pairing strategy (i.e., pairing some inbred females instead of keeping them as surplus individuals in the population. Here, by using studbook data we explore whether purging has occurred in the population by investigating whether after the change in pairing strategy a inbreeding and homozygosity increased at the population level, b fitness (survival increased, and c the relationship between inbreeding and juvenile survival, was positive. Consistent with the existence of purging, we found an increase in inbreeding coefficients, homozygosity and juvenile survival. In addition, we showed that in the course of the breeding programme the relationship between inbreeding and juvenile survival was not uniform but rather changed over time: it was negative in the early years, flat in the middle years and positive after the change in pairing strategy. We highlight that by allowing inbred individuals to mate in captive stocks we may favour sex-ratio bias towards females, a desirable managing strategy to reduce the surplus of males that force most zoos to use ethical culling and euthanizing management tools. We discuss these possibilities but also acknowledge that many

  7. Better Fitness in Captive Cuvier’s Gazelle despite Inbreeding Increase: Evidence of Purging?

    Science.gov (United States)

    Moreno, Eulalia; Pérez-González, Javier; Carranza, Juan; Moya-Laraño, Jordi

    2015-01-01

    Captive breeding of endangered species often aims at preserving genetic diversity and to avoid the harmful effects of inbreeding. However, deleterious alleles causing inbreeding depression can be purged when inbreeding persists over several generations. Despite its great importance both for evolutionary biology and for captive breeding programmes, few studies have addressed whether and to which extent purging may occur. Here we undertake a longitudinal study with the largest captive population of Cuvier's gazelle managed under a European Endangered Species Programme since 1975. Previous results in this population have shown that highly inbred mothers tend to produce more daughters, and this fact was used in 2006 to reach a more appropriate sex-ratio in this polygynous species by changing the pairing strategy (i.e., pairing some inbred females instead of keeping them as surplus individuals in the population). Here, by using studbook data we explore whether purging has occurred in the population by investigating whether after the change in pairing strategy a) inbreeding and homozygosity increased at the population level, b) fitness (survival) increased, and c) the relationship between inbreeding and juvenile survival, was positive. Consistent with the existence of purging, we found an increase in inbreeding coefficients, homozygosity and juvenile survival. In addition, we showed that in the course of the breeding programme the relationship between inbreeding and juvenile survival was not uniform but rather changed over time: it was negative in the early years, flat in the middle years and positive after the change in pairing strategy. We highlight that by allowing inbred individuals to mate in captive stocks we may favour sex-ratio bias towards females, a desirable managing strategy to reduce the surplus of males that force most zoos to use ethical culling and euthanizing management tools. We discuss these possibilities but also acknowledge that many other effects

  8. Estimates of inbreeding and relationship among registered Holstein females in the United States.

    Science.gov (United States)

    Young, C W; Seykora, A J

    1996-03-01

    The estimate of inbreeding for registered Holstein females born during 1990 was 5.1 +/- 0.4% for a random sample of 600 two-line pedigrees. Previously published estimates were 4.7% for 1970, 3.8% for 1976, and 4.3% for 1982 from similar samples of pedigrees. These estimates were calculated using a base of approximately 1884, or the initiation of herd-book registration in the US. The estimate of relationship between randomly paired females born during 1990 was 10.2 +/- 0.8%; relationships were 5.2% for 1970, 7.3% for 1976, and 9.8% for 1982. Average relationship within the breed increased significantly without a corresponding increase in inbreeding. Inbreeding was also estimated for alternative base years with 10-yr increments to determine the effect of base year on estimates of inbreeding. Using 1950 as the base year, inbreeding was estimated at 0.5% for 1970, 0.3% for 1976, 1.6% for 1982, and 2.1% for 1990. Estimates using 1920 as the base year were 2.0% for 1970, 1.9% for 1976, 2.3% for 1982, and 3.2% for 1990. More recent base years gave lower estimates of inbreeding, as expected, but showed an exaggerated percentage of increase in inbreeding from 1970 to 1990. However, the annual amount of increase of inbreeding from 1976 to 1990 was not significantly affected by time of base year and ranged from 0.08 to 0.12/yr. The five most influential bulls of the breed were Pawnee Farm Arlinda Chief 1427381, Round Oak Rag Apple Elevation 1491007, S-W-D Valiant 1650414, Osborndale Ivanhoe 1189870, and Sir Pietertje Ormsby Mercedes 44931; estimated direct relationships to the breed were 0.123, 0.122, 0.096, 0.083, and 0.074, respectively.

  9. NCBI nr-aa BLAST: CBRC-OANA-01-2151 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-OANA-01-2151 gb|ABI63733.1| C-X-C chemokine receptor type 6 [Macaca mulatta] g...b|ABI63740.1| C-X-C chemokine receptor type 6 [Macaca mulatta] gb|ABI63741.1| C-X-C chemokine receptor type 6 [Macaca mula...tta] gb|ABI63750.1| C-X-C chemokine receptor type 6 [Macaca mulatta] gb|ABI63754.1| C-X-C chem...okine receptor type 6 [Macaca mulatta] gb|ABI63757.1| C-X-C chemokine receptor type 6 [Macaca mula...tta] gb|ABI63765.1| C-X-C chemokine receptor type 6 [Macaca mulatta] gb|ABI63766.1| C-X-C c

  10. NCBI nr-aa BLAST: CBRC-GGOR-01-1395 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-GGOR-01-1395 gb|ABI63733.1| C-X-C chemokine receptor type 6 [Macaca mulatta] g...b|ABI63740.1| C-X-C chemokine receptor type 6 [Macaca mulatta] gb|ABI63741.1| C-X-C chemokine receptor type 6 [Macaca mula...tta] gb|ABI63750.1| C-X-C chemokine receptor type 6 [Macaca mulatta] gb|ABI63754.1| C-X-C chem...okine receptor type 6 [Macaca mulatta] gb|ABI63757.1| C-X-C chemokine receptor type 6 [Macaca mula...tta] gb|ABI63765.1| C-X-C chemokine receptor type 6 [Macaca mulatta] gb|ABI63766.1| C-X-C c

  11. Inbreeding and Offspring Sex Ratio in the Pygmy Hippopotamus (Cheoropsis liberiensis) Population Kept in Zoological Gardens.

    Science.gov (United States)

    Graczyk, Magdalena; Cwiertnia, Piotr; Borowska, Alicja; Barczak, Elżbieta; Szwaczkowski, Tomasz

    2015-01-01

    The aim of this study was to estimate the inbreeding level and its impact on offspring sex ratio in the pygmy hippopotamus population kept in zoological gardens. Records of pygmy hippopotamus born between 1873-2013 were extracted from the international studbook. Totally, 1357 individuals originating from 148 breeding units were included (individuals with unknown sex were omitted). The offspring sex ratio is defined as the number of sons to the total number of progeny of each dam and sire. Spearman's rank correlation was employed to examine the relationships between the inbreeding level and offspring sex ratio. Inbreeding coefficients and individual increase in inbreeding coefficients (included as a linear co-variable) were examined as well as the geographic region and birth period using general linear models. The average inbreeding coefficient was 5.39%. The following sex proportion was observed for the inbred population: 57% and 43% for females and males, respectively. A significant relationship between inbreeding level of parents and their offspring sex ratio were estimated for European zoological gardens, whereas in others geographic regions the dependencies were insignificant.

  12. No inbreeding depression in sperm storage ability or offspring viability in Drosophila melanogaster females.

    Science.gov (United States)

    Ala-Honkola, Outi; Manier, Mollie K; Lüpold, Stefan; Droge-Young, Elizabeth M; Collins, William F; Belote, John M; Pitnick, Scott

    2014-01-01

    Mating between relatives usually decreases genetic quality of progeny as deleterious recessive alleles are expressed in inbred individuals. Inbreeding degrades sperm traits but its effects on sperm storage and fate within females are currently unknown. We quantified the relationship between the degrees of inbreeding relevant to natural populations (f=0, 0.25 and 0.50) and the number of sperm inseminated and stored, sperm swimming speed, long-term sperm viability while in storage, pattern of sperm precedence, mating latency, and offspring viability of female Drosophila melanogaster. The use of transgenic flies that have either red or green fluorescent sperm heads allowed us to distinguish two ejaculates in the female reproductive tract and facilitated quantification of sperm storage and use traits. We found no inbreeding depression in either long- or short-term sperm storage ability. The most inbred females exhibited significantly longer mating latency, which could be explained by males preferring to mate with outbred females. On the other hand, as no evidence for cryptic male choice in the form of ejaculate tailoring of sperm number was found, the most inbred females might just be less eager to mate. We also found no evidence that the degree of maternal inbreeding influenced offspring viability. Comparison with a contemporaneous study of male inbreeding consequences for ejaculate quality suggests that inbreeding depression is more severe in males than in females in our study population.

  13. THE EFFECT OF INBREEDING ON THE EARLY PERFORMANCE OF FRESHWATER PRAWN, Macrobrachium rosenbergii

    Directory of Open Access Journals (Sweden)

    Imron Imron

    2009-06-01

    Full Text Available Inbreeding depression has often been considered to be responsible for the deterioration of performance in aquaculture species. Despite a crucial impact that may result from inbreeding depression, comprehensive information reviewing this subject is limited. This study was aimed to gain information on the effect of inbreeding on the early performance of freshwater prawn. The study was performed by comparing performance of inbred and outbred populations. Inbred population was established by brother-sister mating (inbreeding rate of 25% while the outbred population was formed by mating unrelated individuals. Several fitness and productivity related traits including survival, the rate of larval development, stage dispersion and growth of larvae were evaluated. Results suggest that inbred families performed poorer than that of the outbred in survival. However, inbreeding depression did not seem to occur in other traits including the rate of larval development, larval stage dispersion and growth. This study implies that to maintain genetic quality of farmed prawn stocks, inbreeding rate in farmed population must be controlled not to exceed that level. Implications that these findings may have on aquaculture practices and possible alternatives for the solutions are discussed.

  14. Assessment of inbreeding resulting from selection for scrapie resistance: a model for rare sheep breeds.

    Science.gov (United States)

    Brown, C; Orford, M; Tzamaloukas, O; Mavrogenis, A P; Miltiadou, D

    Inbreeding in a small population of Chios sheep undergoing intense selection for the PrP gene was assessed 10 years after the beginning of a scrapie resistance selection programme. Inbreeding in this stock, already under selection for production traits, was analysed by using pedigree records containing 10,492 animals from 1968 to 2008, and also by genotyping 192 individuals with a panel of 15 microsatellites. Genetic markers indicated a loss of heterozygosity (FIS over all loci was 0.059) and allelic diversity (mean effective number of alleles was 3.075±0.275). The annual rate of inbreeding increased significantly after the start of the scrapie resistance programme, ΔF=0.005 compared with ΔF=0.001 before 1999, and was subjected to several genetic bottlenecks, mainly due to the low initial frequency of resistant animals. However, the mean individual inbreeding coefficient estimated from the pedigree - in this closed stock resembling the case of a rare breed - stood at the level of 4.5 per cent, five generations after the implementation of selection for the PrP gene. The inbreeding coefficient estimated by genetic markers was 4.37 per cent, implying that such a marker panel could be a useful and cost-effective tool for estimating inbreeding in unrecorded populations.

  15. The effect of fast created inbreeding on litter size and body weights in mice

    Directory of Open Access Journals (Sweden)

    Meuwissen Theo

    2005-09-01

    Full Text Available Abstract This study was designed to reveal any differences in effects of fast created versus total inbreeding on reproduction and body weights in mice. A line selected for large litter size for 124 generations (H and a control line (K maintained without selection for the same number of generations were crossed (HK and used as a basis for the experiment. Within the HK cross, full sib, cousin or random mating were practised for two generations in order to create new inbreeding (IBF at a fast rate. In the first generation of systematic mating, old inbreeding was regenerated in addition to creation of new inbreeding from the mating design giving total inbreeding (IBT. The number of pups born alive (NBA and body weights of the animals were then analysed by a model including both IBT and IBF. The IBT of the dam was in the present study found to reduce the mean NBA with -0.48 (± 0.22 (p F was -0.42 (± 0.27. For the trait NBA per female mated, the effect of IBT was estimated to be -0.45 (± 0.29 per 10% increase in the inbreeding coefficient and the effect of IBF was -0.90 (± 0.37 (p F of the dam could be found on sex-ratio and body weights at three and six weeks of age in a population already adjusted for IBT.

  16. Inbreeding depression under drought stress in the rare endemic Echium wildpretii (Boraginaceae on Tenerife, Canary islands.

    Directory of Open Access Journals (Sweden)

    Janosch Sedlacek

    Full Text Available How climate-change induced environmental stress may alter the effects of inbreeding in patchy populations of rare species is poorly understood. We investigated the fitness of progeny from experimental self- and cross-pollinations in eight populations of different size of Echium wildpretii, a rare endemic plant of the arid subalpine zone of the Canarian island of Tenerife. As control treatments we used open pollination and autonomous selfing. The seed set of open-pollinated flowers was 55% higher than that of autonomously selfed flowers, showing the importance of animal pollination for reproductive success. The seed set, seed mass and germination rate of seedlings of hand-selfed flowers was similar to that of hand-crossed flowers, indicating weak inbreeding depression (seed set -4.4%, seed mass -4.1%, germination -7.3%. Similarly, under normal watering there were no significant effects of inbreeding on seedling survival (-3.0%. However, under low watering of seedlings inbreeding depression was high (survival -50.2%. Seed set of open- and hand-outcrossed-pollinated flowers was higher in large than in small populations, possibly due to more frequent biparental inbreeding in the latter. However, later measures of progeny fitness were not significantly influenced by population size. We predict that increasing drought duration and frequency due to climate change and reductions of population sizes may increase inbreeding depression in this charismatic plant species and thus threaten its future survival in the longer term.

  17. Inbreeding depression under drought stress in the rare endemic Echium wildpretii (Boraginaceae) on Tenerife, Canary islands.

    Science.gov (United States)

    Sedlacek, Janosch; Schmid, Bernhard; Matthies, Diethart; Albrecht, Matthias

    2012-01-01

    How climate-change induced environmental stress may alter the effects of inbreeding in patchy populations of rare species is poorly understood. We investigated the fitness of progeny from experimental self- and cross-pollinations in eight populations of different size of Echium wildpretii, a rare endemic plant of the arid subalpine zone of the Canarian island of Tenerife. As control treatments we used open pollination and autonomous selfing. The seed set of open-pollinated flowers was 55% higher than that of autonomously selfed flowers, showing the importance of animal pollination for reproductive success. The seed set, seed mass and germination rate of seedlings of hand-selfed flowers was similar to that of hand-crossed flowers, indicating weak inbreeding depression (seed set -4.4%, seed mass -4.1%, germination -7.3%). Similarly, under normal watering there were no significant effects of inbreeding on seedling survival (-3.0%). However, under low watering of seedlings inbreeding depression was high (survival -50.2%). Seed set of open- and hand-outcrossed-pollinated flowers was higher in large than in small populations, possibly due to more frequent biparental inbreeding in the latter. However, later measures of progeny fitness were not significantly influenced by population size. We predict that increasing drought duration and frequency due to climate change and reductions of population sizes may increase inbreeding depression in this charismatic plant species and thus threaten its future survival in the longer term.

  18. Inbreeding depression of sperm traits in the zebra finch Taeniopygia guttata.

    Science.gov (United States)

    Opatová, Pavlína; Ihle, Malika; Albrechtová, Jana; Tomášek, Oldřich; Kempenaers, Bart; Forstmeier, Wolfgang; Albrecht, Tomáš

    2016-01-01

    Inbreeding depression, or the reduction in fitness due to mating between close relatives, is a key issue in biology today. Inbreeding negatively affects many fitness-related traits, including survival and reproductive success. Despite this, very few studies have quantified the effects of inbreeding on vertebrate gamete traits under controlled breeding conditions using a full-sib mating approach. Here, we provide comprehensive evidence for the negative effect of inbreeding on sperm traits in a bird, the zebra finch Taeniopygia guttata. We compared sperm characteristics of both inbred (pedigree F = 0.25) and outbred (pedigree F = 0) individuals from two captive populations, one domesticated and one recently wild-derived, raised under standardized conditions. As normal spermatozoa morphology did not differ consistently between inbred and outbred individuals, our study confirms the hypothesis that sperm morphology is not particularly susceptible to inbreeding depression. Inbreeding did, however, lead to significantly lower sperm motility and a substantially higher percentage of abnormal spermatozoa in ejaculate. These results were consistent across both study populations, confirming the generality and reliability of our findings.

  19. Inbreeding and its Effect on Performance Traits in Austrian Meat Sheep

    Directory of Open Access Journals (Sweden)

    Lina Maximini

    2011-10-01

    Full Text Available The aim of this study was to evaluate the level of inbreeding of meat performance tested herd book sheep in Austria and to evaluate the effect of individual inbreeding on growth and CT (computer tomography scan carcass traits. Performance data (13,614 records, five breeds: Merinoland, Suff olk, Texel, German Blackheaded Meat sheep, Jura were collected in the years 2000-2010. The traits analysed were live weight and average daily gain, as well as traits of body frame, back fat and eye muscle area, all measured on live animals with CT. Inbreeding coefficients (F were calculated with the soft ware PEDIG. F was nested within breed and tested in a mixed model using ASReml. Levels of inbreeding were low with O F of 1.5-3.1%. Only few traits were significantly affected by inbreeding. Both positive and negative effects were found. The effects were small, most oft en nonlinear and vary across breeds. Inbreeding and its effects on performance traits do not seem to be an issue in Austrian meat sheep populations at the moment. However, monitoring and further analyses are recommended.

  20. Inbreeding and its Effect on Performance Traits in Austrian Meat Sheep

    Directory of Open Access Journals (Sweden)

    Lina Maximini

    2011-09-01

    Full Text Available The aim of this study was to evaluate the level of inbreeding of meat performance tested herd book sheep in Austria and to evaluate the effect of individual inbreeding on growth and CT (computer tomography scan carcass traits. Performance data (13,614 records, five breeds: Merinoland, Suff olk, Texel, German Blackheaded Meat sheep, Jura were collected in the years 2000-2010. The traits analysed were live weight and average daily gain, as well as traits of body frame, back fat and eye muscle area, all measured on live animals with CT. Inbreeding coefficients (F were calculated with the soft ware PEDIG. F was nested within breed and tested in a mixed model using ASReml. Levels of inbreeding were low with O F of 1.5-3.1%. Only few traits were significantly affected by inbreeding. Both positive and negative effects were found. The effects were small, most oft en nonlinear and vary across breeds. Inbreeding and its effects on performance traits do not seem to be an issue in Austrian meat sheep populations at the moment. However, monitoring and further analyses are recommended.

  1. EFFECT OF INBREEDING ON PRE-WEANING GROWTH TRAITS IN THALLI SHEEP

    Directory of Open Access Journals (Sweden)

    A. HUSSAIN, P. AKHTAR, S. ALI, M. YOUNAS1 AND M. SHAFIQ2

    2006-07-01

    Full Text Available Pedigree records of 17250 Thalli sheep with 17030 lambings maintained at the Livestock Experiment Station, Rakh Ghulaman, Distt. Bhakkar, Pakistan during the period from 1975 to 2004 were utilized in the present study. Average values for birth weight, weights at 60 and 90 days of age, weaning weight and pre-weaning average daily gain were 4.11 ± 0.82, 11.58 ± 3.57, 14.92 ± 4.56, 18.95 ± 4.56 and 0.12 ± 0.04 kg, respectively. Coefficients of inbreeding ranged from 10.15 to 37.50 percent for 295 animals, being 1.70 percent of the flock. Inbreeding significantly (P<0.01 affected birth and 60 days weight. Birth weight and 60 days weight decreased by 0.051 and 0.048 kg for each 1 percent increase in the level of inbreeding. However, inbreeding had non significant effect on weight at 90 days of age, weaning weight and pre-weaning average daily gain. The regression values for these traits were 0.010, 0.083 and 0.105, respectively. It was concluded that inbreeding showed deleterious effects only in early stages of life but as the lambs grew older the effect of inbreeding on pre-weaning traits diminished.

  2. Pharmacokinetics of Cefovecin in Cynomolgus Macaques (Macaca fascicularis), Olive Baboons (Papio anubis), and Rhesus Macaques (Macaca mulatto)

    Energy Technology Data Exchange (ETDEWEB)

    Raabe, Brigitte M.; Lovaglio, Jamie A.; Grover, GScott; Brown, Scott A.; Boucher, Joseph F.; Yuan, Yang; Civil, Jacqueline R.; Gillhouse, Kimberly A.; Stubbs, Makeida N.; Hoggatt, Amber F.; Halliday, Lisa C.; Fortman, Jeffrey D.

    2011-05-01

    Cefovecin sodium is a long-acting, third-generation, cephalosporin antibiotic approved for the treatment of skin infections in dogs and cats. The pharmacokinetic properties of cefovecin were evaluated in cynomolgus macaques (Macaca fascicularis), olive baboons (Papio anubis), and rhesus macaques (Macaca mulatto) by using a single-dose (8 mg/kg SC) dosing regimen. Plasma cefovecin concentrations were determined by using ultra-performance liquid chromatography with tandem mass spectrometry, and a noncompartmental model was used to determine pharmacokinetic parameters. The half-life of cefovecin was 4.95 {+-} 1.47 h in cynomolgus macaques, 9.17 {+-} 1.84 h in olive baboons, and 8.40 {+-} 2.53 h in rhesus macaques. These values are considerably lower than the half-lives previously published for dogs (133 h) and cats (166 h). The extended half-life of cefovecin in dogs and cats is speculated to be due to active reabsorption of drug in the kidney tubules because plasma clearance is well below the normal glomerular filtration rate. In nonhuman primates, renal clearance rates approximated plasma clearance rates, suggesting that active renal reabsorption of cefovecin does not occur in these species. The pharmacokinetic properties of cefovecin in nonhuman primates are vastly different from the pharmacokinetic properties in dogs and cats, precluding its use as a long-acting antibiotic in nonhuman primates. This study highlights the importance of performing pharmacokinetic studies prior to extralabel drug usage.

  3. 小鼠抗食蟹猴IgG单克隆抗体的制备%Preparation Monoclonal Antibodies Of Mice Against Macaca fascicularis IgG

    Institute of Scientific and Technical Information of China (English)

    张段玲; 张彦龙; 白素英

    2012-01-01

    目的 制备抗食蟹猴、恒河猴等非人灵长类实验动物免疫球蛋白二级抗体,开展对其传染病血清学快速诊断方法的建立.方法 采用饱和硫酸铵盐析、Agarose-Protein G亲和层析技术,从食蟹猴血清中提纯IgG.经SDS-PAGE电泳鉴定,采用常规法免疫C57BL/6小鼠,三次免疫后取脾细胞与Sp2/0-Agl4骨髓瘤细胞通过PEG4000融合制备杂交瘤细胞,利用间接ELISA、Western blot等方法进行筛选、鉴定.结果 得到5株阳性杂交瘤,分别命名为2B6、2B7、2D9、3B2、5E4,并且5株杂交瘤分泌的抗体均与恒河猴的IgG或血清发生交叉反应,而与其他物种如东北虎、犬等动物的IgG或血清无交叉反应.结论 5株杂交瘤产生的单克隆抗体(McAb)具有较好免疫活性,且能长期、稳定地分泌抗体.此项研究工作为后续研究食蟹猴、恒河猴传染病血清学诊断方法奠定基础.%Objective In order to prepare imraunoglobulin G (IgG) secondary antibody of non-human primates such as Macaca fascicularis and Macaca mulatta and establish a quick serological method to diagnose their diseases. Methods Macaco fascicularis IgG was isolated and purified from Macaco fascicularis serum by precipitated use saturated ammonium sulfate and affinity chromatography technology with Agarose-Protein G. After identified by SDS-PAGE electrophoresis murine monoclonal antibody ( McAb) were produced by conventional immune method and hybridoma technology. Monoclonal antibody was produced when C57BL/6 mice was immunized three times and its spleen cells were fused with SP2/0-Agl4 myeloma cells. Indirect ELISA and Western blot methods were used for identification. Result 5 strains of myeloma cells acquired which were named 2B6, 2B7, 3B2, 5E4, 2D9. The antibodies they secret can all react well with both IgG and their serum of Macaco fascicularis and Macaca mulatto. There are no cross reaction with other species such as east-northern tigers and dogs. Conclusion The 5

  4. The effects of selective history and environmental heterogeneity on inbreeding depression in experimental populations of Drosophila melanogaster.

    Science.gov (United States)

    Long, Tristan A F; Rowe, Locke; Agrawal, Aneil F

    2013-04-01

    Inbreeding depression varies considerably among populations, but only some aspects of this variation have been thoroughly studied. Because inbreeding depression requires genetic variation, factors that influence the amount of standing variation can affect the magnitude of inbreeding depression. Environmental heterogeneity has long been considered an important contributor to the maintenance of genetic variation, but its effects on inbreeding depression have been largely ignored by empiricists. Here we compare inbreeding depression, measured in two environments, for 20 experimental populations of Drosophila melanogaster that have been maintained under four different selection regimes, including two types of environmentally homogeneous selection and two types environmentally heterogeneous selection. In line with theory, we find considerably higher inbreeding depression in populations from heterogeneous selection regimes. We also use our data set to test whether inbreeding depression is correlated with either stress or the phenotypic coefficient of variation (CV), as suggested by some recent studies. Though both of these factors are significant predictors of inbreeding depression in our study, there is an effect of assay environment on inbreeding depression that cannot be explained by either stress or CV.

  5. Genome-wide estimates of coancestry, inbreeding and effective population size in the Spanish Holstein population.

    Directory of Open Access Journals (Sweden)

    Silvia Teresa Rodríguez-Ramilo

    Full Text Available Estimates of effective population size in the Holstein cattle breed have usually been low despite the large number of animals that constitute this breed. Effective population size is inversely related to the rates at which coancestry and inbreeding increase and these rates have been high as a consequence of intense and accurate selection. Traditionally, coancestry and inbreeding coefficients have been calculated from pedigree data. However, the development of genome-wide single nucleotide polymorphisms has increased the interest of calculating these coefficients from molecular data in order to improve their accuracy. In this study, genomic estimates of coancestry, inbreeding and effective population size were obtained in the Spanish Holstein population and then compared with pedigree-based estimates. A total of 11,135 animals genotyped with the Illumina BovineSNP50 BeadChip were available for the study. After applying filtering criteria, the final genomic dataset included 36,693 autosomal SNPs and 10,569 animals. Pedigree data from those genotyped animals included 31,203 animals. These individuals represented only the last five generations in order to homogenise the amount of pedigree information across animals. Genomic estimates of coancestry and inbreeding were obtained from identity by descent segments (coancestry or runs of homozygosity (inbreeding. The results indicate that the percentage of variance of pedigree-based coancestry estimates explained by genomic coancestry estimates was higher than that for inbreeding. Estimates of effective population size obtained from genome-wide and pedigree information were consistent and ranged from about 66 to 79. These low values emphasize the need of controlling the rate of increase of coancestry and inbreeding in Holstein selection programmes.

  6. Genome-wide estimates of coancestry, inbreeding and effective population size in the Spanish Holstein population.

    Science.gov (United States)

    Rodríguez-Ramilo, Silvia Teresa; Fernández, Jesús; Toro, Miguel Angel; Hernández, Delfino; Villanueva, Beatriz

    2015-01-01

    Estimates of effective population size in the Holstein cattle breed have usually been low despite the large number of animals that constitute this breed. Effective population size is inversely related to the rates at which coancestry and inbreeding increase and these rates have been high as a consequence of intense and accurate selection. Traditionally, coancestry and inbreeding coefficients have been calculated from pedigree data. However, the development of genome-wide single nucleotide polymorphisms has increased the interest of calculating these coefficients from molecular data in order to improve their accuracy. In this study, genomic estimates of coancestry, inbreeding and effective population size were obtained in the Spanish Holstein population and then compared with pedigree-based estimates. A total of 11,135 animals genotyped with the Illumina BovineSNP50 BeadChip were available for the study. After applying filtering criteria, the final genomic dataset included 36,693 autosomal SNPs and 10,569 animals. Pedigree data from those genotyped animals included 31,203 animals. These individuals represented only the last five generations in order to homogenise the amount of pedigree information across animals. Genomic estimates of coancestry and inbreeding were obtained from identity by descent segments (coancestry) or runs of homozygosity (inbreeding). The results indicate that the percentage of variance of pedigree-based coancestry estimates explained by genomic coancestry estimates was higher than that for inbreeding. Estimates of effective population size obtained from genome-wide and pedigree information were consistent and ranged from about 66 to 79. These low values emphasize the need of controlling the rate of increase of coancestry and inbreeding in Holstein selection programmes.

  7. Male inbreeding status affects female fitness in a seed-feeding beetle.

    Science.gov (United States)

    Fox, Charles W; Xu, J; Wallin, W G; Curtis, C L

    2012-01-01

    Inbreeding generally reduces male mating activity such that inbred males are less successful in male-male competition. Inbred males can also have smaller accessory glands, transfer less sperm and produce sperm that are less motile, less viable or have a greater frequency of abnormalities, all of which can reduce the fertilization success and fitness of inbred males relative to outbred males. However, few studies have examined how male inbreeding status affects the fitness of females with whom they mate. In this study, we examine the effect of male inbreeding status (inbreeding coefficient f = 0.25 vs. f = 0) on the fecundity, adult longevity and the fate of eggs produced by outbred females in the seed-feeding beetle, Callosobruchus maculatus. Females mated to inbred males were less likely to lay eggs. Of those that laid eggs, females mated to inbred males laid 6-12% fewer eggs. Females mated to inbred males lived on average 5.4% longer than did females mated to outbred males, but this effect disappeared when lifetime fecundity was used as a covariate in the analysis. There was no effect of male inbreeding status on the proportion of a female's eggs that developed or hatched, and no evidence that inbred males produced smaller nuptial gifts. However, ejaculates of inbred males contained 17-33% fewer sperm, on average, than did ejaculates of outbred males. Our study demonstrates that mating with inbred males has significant direct consequences for the fitness of female C. maculatus, likely mediated by effects of inbreeding status on the number of sperm in male ejaculates. Direct effects of male inbreeding status on female fitness should be more widely considered in theoretical models and empirical studies of mate choice.

  8. Estimation of Inbreeding Coefficient and Its Effects on Lamb Survival in Sheep

    Directory of Open Access Journals (Sweden)

    mohammad almasi

    2016-04-01

    Full Text Available Introduction The mating of related individuals produces an inbred offspring and leads to an increased homozygosity in the progeny, genetic variance decrease within families and increase between families. The ration of homozygosity for individuals was calculated by inbreeding coefficient. Inbred individuals may carry two alleles at a locus that are replicated from one gene in the previous generations, called identical by descent. The inbreeding coefficient should be monitored in a breeding program, since it plays an important role at decreasing of homeostasis, performance, reproduction and viability. The trend of inbreeding is an indicator for determining of inbreeding level in the herd. Inbreeding affects both phenotypic means of traits and genetic variances within population, thus it is an important factor for delimitations of genetic progress in a population. Reports showed an inbreeding increase led to decrease of phenotypic value in some of the productive and reproductive traits. Materials and Methods In the current study, the pedigree data of 14030 and 6215 records of Baluchi and Iranblack lambs that collected from 1984 to 2011 at the Abbasabad Sheep Breeding Station in Mashhad, Iran, 3588 records of Makoei lambs that collected from 1994 to 2011 at the Makoei sheep breeding station and 6140, records of Zandi lambs that collected from 1991 to 2011 at the Khejir Sheep Breeding Station in Tehran, Iran were used to estimating the inbreeding coefficient and its effects on lamb survival in these breeds. Lamb survival trait was scored as 1 and 0 for lamb surviving and not surviving at weaning weight, respectively. Inbreeding coefficient was estimated by relationship matrix algorithm (A=TDT' methodology using the CFC software program. Effects of inbreeding coefficient on lamb survival were estimated by restricted maximum likelihood (REML method under 12 different animal models using ASReml 3.0 computer programme. Coefficient of inbreeding for each

  9. Marker-assisted selection can reduce true as well as pedigree-estimated inbreeding.

    Science.gov (United States)

    Pedersen, L D; Sørensen, A C; Berg, P

    2009-05-01

    This study investigated whether selection using genotype information reduced the rate and level of true inbreeding, that is, identity by descent, at a selectively neutral locus as well as a locus under selection compared with traditional BLUP selection. In addition, the founder representation at these loci and the within-family selection at the nonneutral locus were studied. The study was carried out using stochastic simulation of a population resembling the breeding nucleus of a dairy cattle population for 25 yr. Each year, 10 proven bulls were selected across herds along with 100 dams from within each of 40 herds. Selection was performed using BLUP, marker-assisted, or gene-assisted selection for a trait with low heritability (h2 = 0.04) only expressed in females, mimicking a health trait. The simulated genome consisted of 2 chromosomes. One biallelic quantitative trait loci (QTL) with an initial frequency of the favorable allele of 0.1, and initially explaining 25% of the genetic variance as well as 4 markers were simulated in linkage disequilibrium, all positioned at chromosome 1. Chromosome 2 was selectively neutral, and consisted of a single neutral locus. The results showed that in addition to reducing pedigree-estimated inbreeding, the incorporation of genotype information in the selection criteria also reduced the level and rate of true inbreeding. In general, true inbreeding in the QTL was greater than pedigree-estimated inbreeding with respect to both the level and rate of inbreeding, as expected. Also as expected, true and pedigree-estimated inbreeding in the neutral locus were the same. Furthermore, after 25 yr, or approximately 5 generations, the pedigree-estimated level of inbreeding was reduced by 11 and 24% compared with BLUP in gene- and marker-assisted selection, respectively, and the level of true inbreeding in the QTL was reduced by 22 and 13%, respectively. The difference between selection scenarios was found to be caused by a larger number of

  10. Pedigree analysis and inbreeding depression on growth traits in Brazilian Marchigiana and Bonsmara breeds.

    Science.gov (United States)

    Santana, M L; Oliveira, P S; Eler, J P; Gutiérrez, J P; Ferraz, J B S

    2012-01-01

    The study of population structure by pedigree analysis is useful to identify important circumstances that affect the genetic history of populations. The intensive use of a small number of superior individuals may reduce the genetic diversity of populations. This situation is very common for the beef cattle breeds. Therefore, the objectives of the present study were to analyze the pedigree and possible inbreeding depression on traits of economic interest in the Marchigiana and Bonsmara breeds and to test the inclusion of the individual inbreeding coefficient (F(i)) or individual increases in inbreeding coefficient (ΔF(i)) in the genetic evaluation model for the quantification of inbreeding depression. The complete pedigree file of the Marchigiana breed included 29,411 animals born between 1950 and 2003. For the Bonsmara breed, the pedigree file included 18,695 animals born between 1988 and 2006. Only animals with at least 2 equivalent generations of known pedigree were kept in the analyses of inbreeding effect on birth weight, weaning weight measured at about 205 d, and BW at 14 mo in the Marchigiana breed, and on birth weight, weaning weight, and scrotal circumference measured at 12 mo in the Bonsmara breed. The degree of pedigree knowledge was greater for Marchigiana than for Bonsmara animals. The average generation interval was 7.02 and 3.19 for the Marchigiana and Bonsmara breed, respectively. The average inbreeding coefficient was 1.33% for Marchigiana and 0.26% for Bonsmara. The number of ancestors explaining 50% of the gene pool and effective population size computed via individual increase in coancestry were 13 and 97.79 for Marchigiana and 41 and 54.57 for Bonsmara, respectively. These estimates indicate reduction in genetic variability in both breeds. Inbreeding depression was observed for most of the growth traits. The model including ΔF(i) can be considered more adequate to quantify inbreeding depression. The inclusion of F(i) or ΔF(i) in the genetic

  11. A simple method to account for natural selection when predicting inbreeding depression.

    Science.gov (United States)

    García-Dorado, Aurora

    2008-11-01

    It has been widely appreciated that natural selection opposes the progress of inbreeding in small populations, thus limiting the actual inbreeding depression for fitness traits. However, no method to account for the consequences of this process has been given so far. I give a simple and intuitive method to predict inbreeding depression, taking into account the increase in selection efficiency against recessive alleles during inbreeding. It is based on the use of a "purged inbreeding coefficient" g(t) that accounts for the reduction of the probability of the deleterious homozygotes caused by the excess d of detrimental effect for deleterious alleles in the homozygous condition over its additive expectation. It is shown that the effect of purging can be important even for relatively small populations. For between-loci variable deleterious effects, accurate predictions can be obtained using the effective homozygous deleterious excess d(e), which can be estimated experimentally and is robust against variation of the ancestral effective population size. The method can be extended to any trait and it is used to predict the evolution of the mean viability or fecundity in a conservation program with equal or random family contributions.

  12. A recursive method for computing expected kinship and inbreeding in complex and dynamic breeding programmes.

    Science.gov (United States)

    Sitzenstock, F; Ytournel, F; Simianer, H

    2013-02-01

    In many livestock breeding programmes, the development of inbreeding is of critical importance. Thus, the assessment of the expected development of inbreeding should be an essential element in the design of breeding programmes. We propose a new method to deterministically predict the rate of inbreeding based on the gene-flow method in well-defined complex and dynamic breeding programmes. In the suggested approach, a breeding programme has to be structured in homogeneous age-sex-groups, so called cohorts, with a defined origin of genes. Starting from an initial setup (usually an unrelated and non-inbred base population), transition rules to calculate the kinship within and between cohorts originating from reproduction or ageing, respectively, are defined. Using this approach recursively provides the expected development of kinship within and between all cohorts over time, which can be combined into average kinships for the whole population or defined subsets. From these quantities, relevant parameters like the inbreeding rate or the effective population size are easily derived. We illustrate the method with a simple static example breeding programme in sheep. Based on this reference breeding programme, we demonstrate the use of our approach for dynamic breeding programmes, in which cohort sizes or vectors of gene origin change over time: here, we model the situation of exponential population growth and a bottleneck situation, respectively. The suggested approach does not account for the effect of selection on the development of inbreeding, but ideas to overcome this limitation are discussed.

  13. Quantitative genetics model as the unifying model for defining genomic relationship and inbreeding coefficient.

    Science.gov (United States)

    Wang, Chunkao; Da, Yang

    2014-01-01

    The traditional quantitative genetics model was used as the unifying approach to derive six existing and new definitions of genomic additive and dominance relationships. The theoretical differences of these definitions were in the assumptions of equal SNP effects (equivalent to across-SNP standardization), equal SNP variances (equivalent to within-SNP standardization), and expected or sample SNP additive and dominance variances. The six definitions of genomic additive and dominance relationships on average were consistent with the pedigree relationships, but had individual genomic specificity and large variations not observed from pedigree relationships. These large variations may allow finding least related genomes even within the same family for minimizing genomic relatedness among breeding individuals. The six definitions of genomic relationships generally had similar numerical results in genomic best linear unbiased predictions of additive effects (GBLUP) and similar genomic REML (GREML) estimates of additive heritability. Predicted SNP dominance effects and GREML estimates of dominance heritability were similar within definitions assuming equal SNP effects or within definitions assuming equal SNP variance, but had differences between these two groups of definitions. We proposed a new measure of genomic inbreeding coefficient based on parental genomic co-ancestry coefficient and genomic additive correlation as a genomic approach for predicting offspring inbreeding level. This genomic inbreeding coefficient had the highest correlation with pedigree inbreeding coefficient among the four methods evaluated for calculating genomic inbreeding coefficient in a Holstein sample and a swine sample.

  14. Calving Performance in the Endangered Murboden Cattle Breed: Genetic Parameters and Inbreeding Depression

    Directory of Open Access Journals (Sweden)

    Sophie A.e. Eaglen

    2013-09-01

    Full Text Available Calving is a key event on any cattle farm, with both economic and animal welfare consequences when complications arise. Although mostly reported in highly selected breeds, problematic calving performance is also a worry to the unselected dualpurpose Murboden breed, local to Austria. This study presents genetic parameter estimates for calving ease and stillbirth in Murboden cattle. Furthermore, a potential effect of inbreeding on the breeds’ calving performance is evaluated. Results show a moderate direct and maternal heritability (0.18±0.04; 0.11±0.02 and a significant negative direct-maternal genetic correlation for calving ease (-0.41±0.10. Heritabilities of stillbirth are low yet significant (0.048±0.01; 0.018±0.007. A significant effect of inbreeding was detected on maternal calving ease i.e. the ease with which a dam calves. By categorizing the inbreeding coefficients of the dam in six ascending classes it was shown that calving ease worsens as inbreeding coefficients become larger. Results of this study reveal significant genetic variation in calving performance of the Murboden breed which opens doors for genetic selection. An additional important aspect of this study is that its result on inbreeding depression gives counterweight to the general intuitive notion in literature that high selection for production traits is the major contributor to calving difficulty in dairy and beef cattle breeds worldwide.

  15. NCBI nr-aa BLAST: CBRC-PHAM-01-0934 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-PHAM-01-0934 ref|NP_001036238.2| chemokine (C-C motif) receptor 5 [Macaca mula...eptor 5 [Macaca nigra] gb|AAC51158.1| CC chemokine receptor 5 [Macaca mulatta] gb|AAC51109.1| CC chemokine receptor 5 [Macaca mula...laris] gb|AAB62555.1| CC chemokine receptor-5 [Macaca nemestrina] gb|AAB62556.1| CC chemokine receptor-5 [Macaca mula...tta] gb|AAQ22367.1| CC chemokine receptor 5 [Macaca nemestrina] gb|ABF71557.1| CC-chemokine receptor [Macaca mula...tta] gb|ABF71558.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71559.1| CC-chemokine receptor [Macaca mula

  16. NCBI nr-aa BLAST: CBRC-PVAM-01-0927 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-PVAM-01-0927 ref|NP_001036238.2| chemokine (C-C motif) receptor 5 [Macaca mula...eptor 5 [Macaca nigra] gb|AAC51158.1| CC chemokine receptor 5 [Macaca mulatta] gb|AAC51109.1| CC chemokine receptor 5 [Macaca mula...laris] gb|AAB62555.1| CC chemokine receptor-5 [Macaca nemestrina] gb|AAB62556.1| CC chemokine receptor-5 [Macaca mula...tta] gb|AAQ22367.1| CC chemokine receptor 5 [Macaca nemestrina] gb|ABF71557.1| CC-chemokine receptor [Macaca mula...tta] gb|ABF71558.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71559.1| CC-chemokine receptor [Macaca mula

  17. NCBI nr-aa BLAST: CBRC-MMUR-01-1280 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-MMUR-01-1280 ref|NP_001036238.2| chemokine (C-C motif) receptor 5 [Macaca mula...eptor 5 [Macaca nigra] gb|AAC51158.1| CC chemokine receptor 5 [Macaca mulatta] gb|AAC51109.1| CC chemokine receptor 5 [Macaca mula...laris] gb|AAB62555.1| CC chemokine receptor-5 [Macaca nemestrina] gb|AAB62556.1| CC chemokine receptor-5 [Macaca mula...tta] gb|AAQ22367.1| CC chemokine receptor 5 [Macaca nemestrina] gb|ABF71557.1| CC-chemokine receptor [Macaca mula...tta] gb|ABF71558.1| CC-chemokine receptor [Macaca mulatta] gb|ABF71559.1| CC-chemokine receptor [Macaca mula

  18. No Inbreeding depression for low temperature developmental acclimation across multiple drosophila species

    DEFF Research Database (Denmark)

    Kristensen, Torsten Nygård; Loeschcke, Volker; Bilde, Trine

    2011-01-01

    is highly species specific, and differs among ecotypes (e.g., tropical and widespread species). Apart from being exposed to thermal stress many small and fragmented populations face genetic challenges due to, for example, inbreeding. Inbreeding has been shown to reduce inherent resistance levels toward......Populations are from time to time exposed to stressful temperatures. Their thermal resistance levels are determined by inherent and plastic mechanisms, which are both likely to be under selection in natural populations. Previous studies on Drosophila species have shown that inherent resistance...... stressful temperatures, but whether adaptation to thermal stress through plastic responses also is affected by inbreeding is so far not clear. In this study, we test inherent cold resistance and the ability to respond plastically to temperature changes through developmental cold acclimation in inbred...

  19. Inbreeding effects on standard metabolic rate investigated at cold, benign and hot temperatures in Drosophilia melanogaster

    DEFF Research Database (Denmark)

    Jensen, Palle; Overgaard, Johannes; Loeschcke, Volker

    2014-01-01

    in replicated lines of inbred and outbred Drosophila melanogaster at stressful low, benign and stressful high temperatures. The lowest measurements of metabolic rate in our study are always associated with the low activity period of the diurnal cycle and these measurements therefore serve as good estimates...... of standard metabolic rate. Due to the potentially added costs of genetic stress in inbred lines we hypothesized that inbred individuals have increased metabolic rate compared to outbred controls and that this is more pronounced at stressful temperatures due to synergistic inbreeding by environment......Inbreeding increases homozygosity, which is known to affect the mean and variance of fitness components such as growth, fecundity and mortality rate. Across inbred lines inbreeding depression is typically observed and the variance between lines is increased in inbred compared to outbred lines...

  20. QTL mapping of inbreeding-related cold sensitivity and conditional lethality in Drosophila melanogaster

    DEFF Research Database (Denmark)

    Vermeulen, Corneel J.; Bijlsma, R.; Loeschcke, Volker

    2008-01-01

    Inbreeding depression is a central theme within genetics, and is of specific interest for researchers within evolutionary and conservation genetics and animal and plant breeding. Inbreeding effects are thought to be caused by the joint expression of conditional and unconditional deleterious alleles...

  1. Sex differences in the genetic architecture of lifespan in a seed beetle: extreme inbreeding extends male lifespan

    DEFF Research Database (Denmark)

    Bilde, T.; Maklakov, Alexei A.; Meisner, Katrine;

    2009-01-01

    -specific responses to inbreeding to study the genetic architecture of lifespan and mortality rates in Callosobruchus maculatus, a seed beetle that shows sexual dimorphism in lifespan. Two independent assays revealed opposing sex-specific responses to inbreeding. The combined data set showed that inbred males live...

  2. The effects of inbreeding on sperm quality traits in captive‐bred lake trout, Salvelinus namaycush (Walbaum, 1972)

    DEFF Research Database (Denmark)

    Johnson, K.; Butts, I. A. E.; Smith, J. L.

    2015-01-01

    depression in the studied population, due to purging, low levels of inbreeding or lack of detection at the gametic level, or (ii) relaxed selective pressures due to benign hatchery conditions. The present study provides significant insight into the effects of inbreeding on sperm quality in a captive...

  3. An effective rotational mating scheme for inbreeding reduction in captive populations illustrated by the rare sheep breed

    NARCIS (Netherlands)

    Windig, J.J.; Lansbergen, L.M.T.E.

    2008-01-01

    Within breeds and other captive populations, the risk of high inbreeding rates and loss of diversity can be high within (small) herds or subpopulations. When exchange of animals between different subpopulations is organised according to a rotational mating scheme, inbreeding rates can be restricted.

  4. Genomic Variation of Inbreeding and Ancestry in the Remaining Two Isle Royale Wolves.

    Science.gov (United States)

    Hedrick, Philip W; Kardos, Marty; Peterson, Rolf O; Vucetich, John A

    2017-03-01

    Inbreeding, relatedness, and ancestry have traditionally been estimated with pedigree information, however, molecular genomic data can provide more detailed examination of these properties. For example, pedigree information provides estimation of the expected value of these measures but molecular genomic data can estimate the realized values of these measures in individuals. Here, we generate the theoretical distribution of inbreeding, relatedness, and ancestry for the individuals in the pedigree of the Isle Royale wolves, the first examination of such variation in a wild population with a known pedigree. We use the 38 autosomes of the dog genome and their estimated map lengths in our genomic analysis. Although it is known that the remaining wolves are highly inbred, closely related, and descend from only 3 ancestors, our analyses suggest that there is significant variation in the realized inbreeding and relatedness around pedigree expectations. For example, the expected inbreeding in a hypothetical offspring from the 2 remaining wolves is 0.438 but the realized 95% genomic confidence interval is from 0.311 to 0.565. For individual chromosomes, a substantial proportion of the whole chromosomes are completely identical by descent. This examination provides a background to use when analyzing molecular genomic data for individual levels of inbreeding, relatedness, and ancestry. The level of variation in these measures is a function of the time to the common ancestor(s), the number of chromosomes, and the rate of recombination. In the Isle Royale wolf population, the few generations to a common ancestor results in the high variance in genomic inbreeding. © The American Genetic Association 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  5. Retrospective investigation of captive red wolf reproductive success in relation to age and inbreeding.

    Science.gov (United States)

    Lockyear, K M; Waddell, W T; Goodrowe, K L; MacDonald, S E

    2009-05-01

    The critically endangered red wolf (Canis rufus) has been subject to a strictly managed captive breeding program for three decades. A retrospective demographic analysis of the captive population was performed based on data from the red wolf studbook. Data analyses revealed a decrease in the effective population size relative to the total population size, and changes in age structure and inbreeding coefficients over time. To varying degrees, the probability of successful breeding and litter sizes declined in association with increasing dam age and sire inbreeding coefficients. Neonate survival also declined with increasing dam age. Recent changes in strategies regarding breed-pair recommendations have resulted in moderate increases in reproductive success.

  6. How Much Does Inbreeding Reduce Heterozygosity? Empirical Results from Aedes aegypti.

    Science.gov (United States)

    Powell, Jeffrey R; Evans, Benjamin R

    2017-01-11

    Deriving strains of mosquitoes with reduced genetic variation is useful, if not necessary, for many genetic studies. Inbreeding is the standard way of achieving this. Full-sib inbreeding the mosquito Aedes aegypti for seven generations reduced heterozygosity to 72% of the initial heterozygosity in contrast to the expected 13%. This deviation from expectations is likely due to high frequencies of deleterious recessive alleles that, given the number of markers studied (27,674 single nucleotide polymorphisms [SNPs]), must be quite densely spread in the genome.

  7. Estimating the inbreeding depression on cognitive behavior: a population based study of child cohort.

    Directory of Open Access Journals (Sweden)

    Mohd Fareed

    Full Text Available BACKGROUND: Cognitive ability tests are widely assumed to measure maximal intellectual performance and predictive associations between intelligence quotient (IQ scores and later mental health problems. Very few epidemiologic studies have been done to demonstrate the relationship between familial inbreeding and modest cognitive impairments in children. OBJECTIVE: We aimed to estimate the effect of inbreeding on children's cognitive behavior in comparison with non-inbred children. METHODOLOGY: A cohort of 408 children (6 to 15 years of age was selected from inbred and non-inbred families of five Muslim populations of Jammu region. The Wechsler Intelligence Scales for Children (WISC was used to measure the verbal IQ (VIQ, performance IQ (PIQ and full scale IQ (FSIQ. Family pedigrees were drawn to access the family history and children's inbred status in terms of coefficient of inbreeding (F. RESULTS: We found significant decline in child cognitive abilities due to inbreeding and high frequency of mental retardation among offspring from inbred families. The mean differences (95% C.I. were reported for the VIQ, being -22.00 (-24.82, -19.17, PIQ -26.92 (-29.96, -23.87 and FSIQ -24.47 (-27.35,-21.59 for inbred as compared to non-inbred children (p<0.001 [corrected].The higher risk of being mentally retarded was found to be more obvious among inbred categories corresponding to the degree of inbreeding and the same accounts least for non-inbred children (p<0.0001. We observed an increase in the difference in mean values for VIQ, PIQ and FSIQ with the increase of inbreeding coefficient and these were found to be statistically significant (p<0.05. The regression analysis showed a fitness decline (depression for VIQ (R2 = 0.436, PIQ (R2 = 0.468 and FSIQ (R2 = 0.464 with increasing inbreeding coefficients (p<0.01. CONCLUSIONS: Our comprehensive assessment provides the evidence for inbreeding depression on cognitive abilities among children.

  8. A strategy analysis for genetic association studies with known inbreeding

    Directory of Open Access Journals (Sweden)

    del Giacco Stefano

    2011-07-01

    Full Text Available Abstract Background Association studies consist in identifying the genetic variants which are related to a specific disease through the use of statistical multiple hypothesis testing or segregation analysis in pedigrees. This type of studies has been very successful in the case of Mendelian monogenic disorders while it has been less successful in identifying genetic variants related to complex diseases where the insurgence depends on the interactions between different genes and the environment. The current technology allows to genotype more than a million of markers and this number has been rapidly increasing in the last years with the imputation based on templates sets and whole genome sequencing. This type of data introduces a great amount of noise in the statistical analysis and usually requires a great number of samples. Current methods seldom take into account gene-gene and gene-environment interactions which are fundamental especially in complex diseases. In this paper we propose to use a non-parametric additive model to detect the genetic variants related to diseases which accounts for interactions of unknown order. Although this is not new to the current literature, we show that in an isolated population, where the most related subjects share also most of their genetic code, the use of additive models may be improved if the available genealogical tree is taken into account. Specifically, we form a sample of cases and controls with the highest inbreeding by means of the Hungarian method, and estimate the set of genes/environmental variables, associated with the disease, by means of Random Forest. Results We have evidence, from statistical theory, simulations and two applications, that we build a suitable procedure to eliminate stratification between cases and controls and that it also has enough precision in identifying genetic variants responsible for a disease. This procedure has been successfully used for the beta-thalassemia, which is

  9. Identification and Characterization of MicroRNAs in Macaca fascicularis by EST Analysis

    Directory of Open Access Journals (Sweden)

    Hao Yang

    2012-01-01

    Full Text Available MicroRNAs (miRNAs are small noncoding RNAs which repress gene expression at the posttranscriptional level. In this study, an expressed sequence tag (EST-based combined method was applied for the detection of miRNAs in Macaca fascicularis which is used as a model animal extensively in medical experiments, particularly those involved with neuroscience and disease. Initially, previously known miRNA sequences from metazoans were used to blast with the EST databases of Macaca fascicularis, and then a range of filtering criteria was conducted to remove some pseudo ones. At last a total of 8 novel conserved miRNAs were identified; their functions were further predicted and analyzed. Together, our study provides insight into miRNAs and their functions in Macaca fascicularis, indicating that the EST analysis is an efficient and affordable alternative approach for identifying novel miRNA candidates.

  10. High resolution karyotype of Thai crab-eating macaque (Macaca fascicularis

    Directory of Open Access Journals (Sweden)

    Fan Xiaobo

    2014-01-01

    Full Text Available Comparative chromosome banding analysis and/or fluorescence in situ hybridization (FISH studies are established approaches to compare human and ape chromosomes. FISH banding is a relatively new and not routinely applied method very well suited to provide to a better understanding of the evolutionary history of primate and human phylogeny. Here multicolor banding (MCB-applying probes derived from Homo sapiens were used to analyze the chromosomes of Thai crab-eating macaque (Macaca fascicularis. The results agree with those of previous studies in other macaques, e.g. Macaca sylvanus or Macaca nemestrina. This result highlights that morphological differences within the Cercopithecoidea must be found rather in subchromosomal changes or even in epigenetics than in gross structural alterations.

  11. High resolution karyotype of thai crab-eating macaque (Macaca fascicularis

    Directory of Open Access Journals (Sweden)

    Fan Xiaobo

    2014-01-01

    Full Text Available Comparative chromosome banding analysis and/or fluorescence in situ hybridization (FISH studies are established approaches to compare human and ape chromosomes. FISH-banding is a relatively new and not routinely applied method suited very well to provide to a better understanding of the evolutionary history of primate and human phylogeny. Here multicolor banding (MCB applying probes derived from Homo sapiens was used to analyze the chromosomes of Thai crab-eating macaque (Macaca fascicularis. The results agree with those of previous studies in other macaques, e.g. Macaca sylvanus or Macaca nemestrina. This result pinpoints, that morphological differences within the Ceropithecoidae must be founded rather in subchromosomal changes or even in epigenetics than in gross structural alterations.

  12. Grooming reciprocity in female tibetan macaques macaca thibetana.

    Science.gov (United States)

    Xia, Dongpo; Li, Jinhua; Garber, Paul A; Sun, Lixing; Zhu, Yong; Sun, Binghua

    2012-06-01

    Grooming among nonhuman primates is widespread and may represent an important service commodity that is exchanged within a biological marketplace. In this study, using focal animal sampling methods, we recorded grooming relationships among 12 adult females in a free-ranging group of Tibetan macaques (Macaca thibetana) at Huangshan, China, to determine the influence of rank and kinship on grooming relationships, and whether females act as reciprocal traders (exchange grooming received for grooming given) or interchange traders (interchange grooming for social tolerance or other commodities). The results showed that: (1) grooming given was positively correlated with grooming received; (2) kinship did not exert a significant influence on grooming reciprocity; and (3) grooming reciprocity occurred principally between individuals of adjacent rank; however, when females of different rank groomed, females tended to groom up the hierarchy (lower ranking individuals groomed higher ranking individuals more than vice versa). Our results support the contention that both grooming reciprocity and the interchange of grooming for tolerance represent important social tactics used by female Tibetan macaques.

  13. Evaluation of Infrared Thermometry in Cynomolgus Macaques (Macaca fascicularis)

    Science.gov (United States)

    Laffins, Michael M; Mellal, Nacera; Almlie, Cynthia L; Regalia, Douglas E

    2017-01-01

    Recording an accurate body temperature is important to assess an animal's health status. We compared temperature data from sedated cynomolgus macaques (Macaca fascicularis) to evaluate differences between rectal, infrared (inguinal and chest), and implanted telemetry techniques with the objective of demonstrating the diagnostic equivalence of the infrared device with other approaches. Infrared thermometer readings are instantaneous and require no contact with the animal. Body temperature data were obtained from 205 (137 male, 68 female) cynomolgus macaques under ketamine (10 mg/kg IM) sedation over a 3-mo period during scheduled physical examinations. Infrared measurements were taken 5 cm from the chest and inguinal areas. We evaluated 10 (9 functional devices) sedated cynomolgus macaques (5 male, 5 female) implanted with telemetry units in a muscular pouch between the internal and external abdominal oblique muscles. We determined that the mean body temperature acquired by using telemetry did not differ from either the mean of inguinal and chest infrared measurements but did differ from the mean of temperature obtained rectally. In addition, the mean rectal temperature differed from the mean of the inguinal reading but not the mean of the chest temperature. The results confirm our hypothesis that the infrared thermometer can be used to replace standard rectal thermometry. PMID:28905720

  14. Cynomolgus macaque (Macaca fascicularis) immunoglobulin heavy chain locus description.

    Science.gov (United States)

    Yu, Guo-Yun; Mate, Suzanne; Garcia, Karla; Ward, Michael D; Brueggemann, Ernst; Hall, Matthew; Kenny, Tara; Sanchez-Lockhart, Mariano; Lefranc, Marie-Paule; Palacios, Gustavo

    2016-07-01

    Cynomolgus macaques (Macaca fascicularis) have become an important animal model for biomedical research. In particular, it is the animal model of choice for the development of vaccine candidates associated with emerging dangerous pathogens. Despite their increasing importance as animal models, the cynomolgus macaque genome is not fully characterized, hindering molecular studies for this model. More importantly, the lack of knowledge about the immunoglobulin (IG) locus organization directly impacts the analysis of the humoral response in cynomolgus macaques. Recent advances in next generation sequencing (NGS) technologies to analyze IG repertoires open the opportunity to deeply characterize the humoral immune response. However, the IG locus organization for the animal is required to completely dissect IG repertoires. Here, we describe the localization and organization of the rearranging IG heavy (IGH) genes on chromosome 7 of the cynomolgus macaque draft genome. Our annotation comprises 108 functional genes which include 63 variable (IGHV), 38 diversity (IGHD), and 7 joining (IGHJ) genes. For validation, we provide RNA transcript data for most of the IGHV genes and all of the annotated IGHJ genes, as well as proteomic data to validate IGH constant genes. The description and annotation of the rearranging IGH genes for the cynomolgus macaques will significantly facilitate scientific research. This is particularly relevant to dissect the immune response during vaccination or infection with dangerous pathogens such as Ebola, Marburg and other emerging pathogens where non-human primate models play a significant role for countermeasure development.

  15. Risk factors for dystocia in pigtailed macaques (Macaca nemestrina).

    Science.gov (United States)

    Stockinger, Diane E; Torrence, Anne E; Hukkanen, Renee R; Vogel, Keith W; Hotchkiss, Charlotte E; Ha, James C

    2011-04-01

    Dystocia (difficult labor) is an important component of the management of nonhuman primates and results in significant fetal and maternal morbidity and increased use of veterinary resources. Dystocias can arise from abnormalities of the maternal pelvis or fetus or uncoordinated uterine activity. Although risk factors for stillbirths have been established in nonhuman primates, risk factors for dystocias have not. The objective of this study was to determine maternal and fetal risk factors for dystocia in macaques. Retrospective data were collected from 83 pigtailed macaques (Macaca nemestrina) diagnosed with dystocia. The diagnosis of dystocia was made based on clinical or pathologic evidence. Maternal records of age, reproductive history, experimental history, clinical records, and fetal birth weight and any applicable fetal necropsy reports were reviewed. The gestational age of the fetus, the infant's birth weight, total previous births by the dam, and the proportions of both viable delivery (inverse effect) and surgical pregnancy interventions (direct effect) in the dam's history generated a model that maximized the experimental variance for predicting dystocia in the current pregnancy and explained 24% of the dystocia deliveries. The number of total previous births and proportion of previous cesarean sections accounted for the greatest effect. This model can identify individual dams within a colony that are at risk for dystocias and allow for changes in breeding colony management, more intense monitoring of dams at risk, or allocation of additional resources.

  16. NCBI nr-aa BLAST: CBRC-MDOM-05-0060 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-MDOM-05-0060 ref|NP_001123902.1| toll-like receptor 6 [Macaca mulatta] dbj|BAG55054.1| toll...-like receptor 6 [Macaca fascicularis] dbj|BAG55055.1| toll-like receptor 6 [Macaca mulatta] NP_001123902.1 0.0 62% ...

  17. NCBI nr-aa BLAST: CBRC-MMUR-01-1015 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-MMUR-01-1015 ref|NP_001123902.1| toll-like receptor 6 [Macaca mulatta] dbj|BAG55054.1| toll...-like receptor 6 [Macaca fascicularis] dbj|BAG55055.1| toll-like receptor 6 [Macaca mulatta] NP_001123902.1 0.0 85% ...

  18. NCBI nr-aa BLAST: CBRC-OPRI-01-0286 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-OPRI-01-0286 ref|NP_001123902.1| toll-like receptor 6 [Macaca mulatta] dbj|BAG55054.1| toll...-like receptor 6 [Macaca fascicularis] dbj|BAG55055.1| toll-like receptor 6 [Macaca mulatta] NP_001123902.1 0.0 72% ...

  19. NCBI nr-aa BLAST: CBRC-MLUC-01-0960 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-MLUC-01-0960 ref|NP_001123902.1| toll-like receptor 6 [Macaca mulatta] dbj|BAG55054.1| toll...-like receptor 6 [Macaca fascicularis] dbj|BAG55055.1| toll-like receptor 6 [Macaca mulatta] NP_001123902.1 0.0 82% ...

  20. Inbreeding Line Culture of Wuzhishan Mini-pig and the Innovation in Nurturing Inbred for Chinese Genetic Resources%五指山小型猪近交系培育与遗传资源创新

    Institute of Scientific and Technical Information of China (English)

    冯书堂; 李奎; 牟玉莲; 杨述林

    2012-01-01

    中国农业科学院北京畜牧兽医研究所二十多年来,利用2头五指山小型猪(Sus scrofa)(Wuzhishan mini-pig,WZSP),采用近交繁育,培育出近交系,最高已获得近交F22,并进行开发应用.对WZSP近交系全基因组测序并与人(Homo sapiens)、短尾猴(Macaque mulatta)和大鼠(Rattus norvegicus)比对,初步分析发现,该近交系全基因组具有较高的纯合度和特异的分子遗传特征,不仅证明了我国实现遗传资源创新培育近交系的可靠性,而且证明该近交系猪是人类理想的“替难者”.实现我国小型猪遗传资源创新的培育目标,取得了一定的经济和较大社会效益,有着重要的现实和历史意义.%Experimental animals are important research content of the research conditions. In past more than 20 years, the Wuzhishan mini-pig (Sus scrofa)(WZSP) inbred line has been carried out by Institute of Animal Science, Chinese Academy of Agricultural Sciences, with inbreeding heddle measure. Up to now, inbreeding F22 of pig's herd have been already obtained which has been applied on human medicine industry. Recently, the whole-genomesequencing of the inbred's WZSP was performed which would be inbred for medical experiments. Compared with hmnan(Homo sapiens), macaque (Macaque mulatto) and rat(Rattus norvegicus), the genome of the inbred pig represented the high homozygosity and specific molecular genetic characteristics. In addition, results from the genome sequencing not only reveal reliability of the innovation in nurturing inbred for Chinese genetic resources, also imply that the inbred line pig is an ideal model in human medical research. The cultivation of Chinese miniature pigs has important practical and historical significance.

  1. The effects of inbreeding and heat stress on male sterility in Drosophila melanogaster

    DEFF Research Database (Denmark)

    Pedersen, Louise Dybdahl; Pedersen, Asger Roer; Bijlsma, Kuke

    2011-01-01

    in benign and stressful environments using Drosophila melanogaster as a model organism. Male sterility was compared in 21 inbred lines and five non-inbred control lines at 25.0 and 29.0 °C. The effect of inbreeding on sterility was significant only at 29.0 °C. This stress-induced increase in sterility...

  2. Heat stress but not inbreeding affects offensive sperm competitiveness in Callosobruchus maculatus.

    Science.gov (United States)

    Lieshout, Emile; Tomkins, Joseph L; Simmons, Leigh W

    2013-09-01

    Environmental and genetic stress have well-known detrimental effects on ejaculate quality, but their concomitant effect on male fitness remains poorly understood. We used competitive fertilization assays to expose the effects of stress on offensive sperm competitive ability in the beetle Callosobruchus maculatus, a species where ejaculates make up more than 5% of male body mass. To examine the effects of environmental and genetic stress, males derived from outcrosses or sib matings were heat shocked at 50°C for 50 min during the pupal stage, while their siblings were maintained at a standard rearing temperature of 28°C. Heat-shocked males achieved only half the offensive paternity success of their siblings. While this population exhibited inbreeding depression in body size, sperm competitiveness was unaffected by inbreeding, nor did the effect of heat shock stress on sperm competitiveness depend on inbreeding status. In contrast, pupal emergence success was increased by 34% among heat-stressed individuals, regardless of their inbreeding status. Heat-shocked males' ejaculate size was 19% reduced, but they exhibited 25% increased mating duration in single mating trials. Our results highlight both the importance of stress in postcopulatory sexual selection, and the variability among stressors in affecting male fitness.

  3. Effects of seed size, inbreeding and maternal sex on offspring fitness in gynodioecious Plantago coronopus

    NARCIS (Netherlands)

    Koelewijn, H.P.; Damme, van J.M.M.

    2005-01-01

    1 Male steriles (MS) must have a fitness advantage relative to hermaphrodites (H) if they are to be maintained in gynodioecious species. We report experiments in which we disentangle the relative contributions of seed size, inbreeding and maternal sex to the fitness advantage of male steriles in Pla

  4. Early-acting inbreeding depression and reproductive success in the highbush blueberry, Vaccinium corymbosum L.

    Science.gov (United States)

    Krebs, S L; Hancock, J F

    1990-06-01

    Tetraploid Vaccinium corymbosum genotypes exhibit wide variability in seed set following self- and cross-pollinations. In this paper, a post-zygotic mechanism (seed abortion) under polygenic control is proposed as the basis for fertility differences in this species. A pollen chase experiment indicated that self-pollen tubes fertilize ovules, but are also 'outcompeted' by foreign male gametes in pollen mixtures. Matings among cultivars derived from a pedigree showed a linear decrease in seed number per fruit, and increase in seed abortion, with increasing relatedness among parents. Selfed (S1) progeny from self-fertile parents were largely self-sterile. At zygotic levels of inbreeding of F>0.3 there was little or no fertility, suggesting that an inbreeding threshold regulates reproductive success in V. corymbosum matings. Individuals below the threshold are facultative selfers, while those above it are obligate outcrossers. Inbreeding also caused a decrease in pollen viability, and reduced female fertility more rapidly than male fertility. These phenomena are discussed in terms of two models of genetic load: (1) mutational load - homozygosity for recessive embryolethal or sub-lethal mutations and (2) segregational load - loss of allelic interactions essential for embryonic vigor. Self-infertility in highbush blueberries is placed in the context of 'late-acting' self-incompatibility versus 'early-acting' inbreeding depression in angiosperms.

  5. Inbreeding effects on resistance and transmission-related traits in the Silene-Microbotryum pathosystem

    NARCIS (Netherlands)

    Ouborg, N.J.; Biere, A.; Mudde, C.L.

    2000-01-01

    Inbreeding in local host populations will be a common phenomenon in host-pathogen systems that are characterized by metapopulation dynamics, i.e., frequent extinction and recolonization of local host populations by small numbers of founding individuals. As an example of a pathosystem with metapopula

  6. Genetic Parameters and Inbreeding Depression of Litter Weight in Pannon White Rabbits

    Directory of Open Access Journals (Sweden)

    István Nagy

    2011-09-01

    Full Text Available Genetic parameters and inbreeding depression were estimated for litter weight at day 21 of a synthetic Pannon White rabbit population selected as a closed population since 1992. The data file consisted of 15652 kindling records of 3711 rabbit does (mated to 933 bucks collected between 1992 and 2009. The total number of animals in the pedigree file was 4804. REML and BLUP procedures were applied using repeatability animal model (VCE and PEST soft ware. The estimated narrow sense heritability for litter weight was low (0.08±0.01. The estimated permanent environmental effects showed higher relative importance compared to the additive genetic effects (0.13±0.01. Analyzing the inbreeding depression simultaneously for all parities, increasing the inbreeding coefficient by 10% had small positive effect on litter weight (0.028 kg but the estimate was not significant (p=0.30. When the inbreeding depression was estimated by parities small depressions (-0.023, -0.045 and -0.021 kg were found for the 2-4th parity groups but the estimates were not significant (p=0.59, 0.23 and 0.61, respectively. On the contrary a significant positive effect was observed for the 1st parity (0.198 kg; p=0.01. The small positive estimate estimated at the 5th parity (0.033 kg was not significant (p=0.39.

  7. Genetic Parameters and Inbreeding Depression of Litter Weight in Pannon White Rabbits

    Directory of Open Access Journals (Sweden)

    István Nagy

    2011-10-01

    Full Text Available Genetic parameters and inbreeding depression were estimated for litter weight at day 21 of a synthetic Pannon White rabbit population selected as a closed population since 1992. The data file consisted of 15652 kindling records of 3711 rabbit does (mated to 933 bucks collected between 1992 and 2009. The total number of animals in the pedigree file was 4804. REML and BLUP procedures were applied using repeatability animal model (VCE and PEST soft ware. The estimated narrow sense heritability for litter weight was low (0.08±0.01. The estimated permanent environmental effects showed higher relative importance compared to the additive genetic effects (0.13±0.01. Analyzing the inbreeding depression simultaneously for all parities, increasing the inbreeding coefficient by 10% had small positive effect on litter weight (0.028 kg but the estimate was not significant (p=0.30. When the inbreeding depression was estimated by parities small depressions (-0.023, -0.045 and -0.021 kg were found for the 2-4th parity groups but the estimates were not significant (p=0.59, 0.23 and 0.61, respectively. On the contrary a significant positive effect was observed for the 1st parity (0.198 kg; p=0.01. The small positive estimate estimated at the 5th parity (0.033 kg was not significant (p=0.39.

  8. Towards a complete North American Anabaptist Genealogy II: analysis of inbreeding.

    Science.gov (United States)

    Agarwala, R; Schäffer, A A; Tomlin, J F

    2001-08-01

    We describe a large genealogy data base, which can be searched by computer, of 295,095 Amish and Mennonite individuals. The data base was constructed by merging our existing Anabaptist Genealogy Database 2.0 containing approximately 85,000 individuals with a genealogy file containing approximately 242,000 individuals, kindly provided by Mr. James Hostetler. The merging process corrected thousands of inconsistencies and eliminated hundreds of duplicate individuals. Geneticists have long been interested in Anabaptist populations because they are closed and have detailed written genealogies. The creation of an enlarged and unified data base affords the opportunity to examine inbreeding trends and correlates in these populations. We show the following results. The frequency of consanguineous marriages shows steady increase over time and reached approximately 85% for individuals born in 1940-1959. Among consanguineous marriages, the median kinship coefficient stayed stable in the 19th century, but rose from 0.0115 to 0.0151 in the 20th century. There are statistically significant associations (p < 0.0001) between inbreeding and family size and interbirth intervals in the 20th century. There is an association (p < 0.0005) between inbreeding and early death for individuals born in 1920-1959. However, this association reverses dramatically (p < 0.0005 in the opposite direction) for individuals born in 1960-1979. We tested for an association between inbreeding and being the mother of twins, but found none.

  9. Accelerating the inbreeding of multi-parental recombinant inbred lines generated by sibling matings.

    Science.gov (United States)

    Welsh, Catherine E; McMillan, Leonard

    2012-02-01

    Inbred model organisms are powerful tools for genetic studies because they provide reproducible genomes for use in mapping and genetic manipulation. Generating inbred lines via sibling matings, however, is a costly undertaking that requires many successive generations of breeding, during which time many lines fail. We evaluated several approaches for accelerating inbreeding, including the systematic use of back-crosses and marker-assisted breeder selection, which we contrasted with randomized sib-matings. Using simulations, we explored several alternative breeder-selection methods and monitored the gain and loss of genetic diversity, measured by the number of recombination-induced founder intervals, as a function of generation. For each approach we simulated 100,000 independent lines to estimate distributions of generations to achieve full-fixation as well as to achieve a mean heterozygosity level equal to 20 generations of randomized sib-mating. Our analyses suggest that the number of generations to fully inbred status can be substantially reduced with minimal impact on genetic diversity through combinations of parental backcrossing and marker-assisted inbreeding. Although simulations do not consider all confounding factors underlying the inbreeding process, such as a loss of fecundity, our models suggest many viable alternatives for accelerating the inbreeding process.

  10. Inbreeding and loss of genetic variation in a reintroduced population of Mauritius Kestrel.

    Science.gov (United States)

    Ewing, Steven R; Nager, Ruedi G; Nicoll, Malcolm A C; Aumjaud, Aurelien; Jones, Carl G; Keller, Lukas F

    2008-04-01

    Many populations have recovered from severe bottlenecks either naturally or through intensive conservation management. In the past, however, few conservation programs have monitored the genetic health of recovering populations. We conducted a conservation genetic assessment of a small, reintroduced population of Mauritius Kestrel (Falco punctatus) to determine whether genetic deterioration has occurred since its reintroduction. We used pedigree analysis that partially accounted for individuals of unknown origin to document that (1) inbreeding occurred frequently (2.6% increase per generation; N(eI)= 18.9), (2) 25% of breeding pairs were composed of either closely or moderately related individuals, (3) genetic diversity has been lost from the population (1.6% loss per generation; N(eV)= 32.1) less rapidly than the corresponding increase in inbreeding, and (4) ignoring the contribution of unknown individuals to a pedigree will bias the metrics derived from that pedigree, ultimately obscuring the prevailing genetic dynamics. The rates of inbreeding and loss of genetic variation in the subpopulation of Mauritius Kestrel we examined were extreme and among the highest yet documented in a wild vertebrate population. Thus, genetic deterioration may affect this population's long-term viability. Remedial conservation strategies are needed to reduce the impact of inbreeding and loss of genetic variation in this species. We suggest that schemes to monitor genetic variation after reintroduction should be an integral component of endangered species recovery programs.

  11. Feral Pigeons (Columba livia) Prefer Genetically Similar Mates despite Inbreeding Depression.

    Science.gov (United States)

    Jacob, Gwenaël; Prévot, Anne-Caroline; Baudry, Emmanuelle

    2016-01-01

    Avoidance of mating between related individuals is usually considered adaptive because it decreases the probability of inbreeding depression in offspring. However, mating between related partners can be adaptive if outbreeding depression is stronger than inbreeding depression or if females gain inclusive fitness benefits by mating with close kin. In the present study, we used microsatellite data to infer the parentage of juveniles born in a French colony of feral pigeons, which allowed us to deduce parent pairs. Despite detectable inbreeding depression, we found that pairwise relatedness between mates was significantly higher than between nonmates, with a mean coefficient of relatedness between mates of 0.065, approximately half the theoretical value for first cousins. This higher relatedness between mates cannot be explained by spatial genetic structure in this colonial bird; it therefore probably results from an active choice. As inbreeding but not outbreeding depression is observed in the study population, this finding accords with the idea that mating with genetically similar mates can confer a benefit in terms of inclusive fitness. Our results and published evidence suggest that preference for related individuals as mates might be relatively frequent in birds.

  12. Single-locus complementary sex determination in the inbreeding wasp Euodynerus foraminatus Saussure (Hymenoptera: Vespidae).

    Science.gov (United States)

    Stahlhut, J K; Cowan, D P

    2004-03-01

    The Hymenoptera have arrhenotokous haplodiploidy in which males normally develop from unfertilized eggs and are haploid, while females develop from fertilized eggs and are diploid. Multiple sex determination systems are known to underlie haplodiploidy, and the best understood is single-locus complementary sex determination (sl-CSD) in which sex is determined at a single polymorphic locus. Individuals heterozygous at the sex locus develop as females; individuals that are hemizygous (haploid) or homozygous (diploid) at the sex locus develop as males. sl-CSD can be detected with inbreeding experiments that produce diploid males in predictable proportions as well as sex ratio shifts due to diploid male production. This sex determination system is considered incompatible with inbreeding because the ensuing increase in homozygosity increases the production of diploid males that are inviable or infertile, imposing a high cost on matings between close relatives. However, in the solitary hunting wasp Euodynerus foraminatus, a species suspected of having sl-CSD, inbreeding may be common due to a high incidence of sibling matings at natal nests. In laboratory crosses with E. foraminatus, we find that sex ratios and diploid male production (detected as microsatellite heterozygosity) are consistent with sl-CSD, but not with other sex determination systems. This is the first documented example of sl-CSD in a hymenopteran with an apparent natural history of inbreeding, and thus presents a paradox for our understanding of hymenopteran genetics.

  13. Inbreeding affects fecundity of American mink (Neovison vison) in Danish farm mink

    DEFF Research Database (Denmark)

    Demontis, Ditte; Larsen, P F; Bækgaard, H

    2011-01-01

    Inbreeding is an increasing problem in farmed mink, because of limited exchange of individuals between farms. In this study, genetic relatedness within seven American mink (Neovison vison) colour strains originating from 13 different mink farms in Denmark was analysed using 21 polymorphic microsa...

  14. An Analysis of Heterosis VS. Inbreeding Effects with an Autotetraploid Cross-Fertilized Plant: MEDICAGO SATIVA L.

    Science.gov (United States)

    Gallais, A

    1984-01-01

    Self-fertilization and crossing were combined to produce a large number of levels of inbreeding and of degrees of kinship. The inbreeding effect increases with the complexity of the character and with its supposed relationship with fitness. A certain amount of heterozygosity appears to be necessary for the expression of variability. With crossing of unrelated noninbred plants, genetic variance is mainly additive, but with inbreeding its major part is nonadditive. High additivity in crossing, therefore, coexists with strong inbreeding depression. However, even in inbreeding the genetic coefficient of covariation among relatives appears to be strongly and linearly related to the classical coefficient of kinship. This means that deviations from the additive model with inbreeding could be partly due to an effect of inbreeding on variances through an effect on means. An attempt to analyze genetic effects from a theoretical model, based upon the identity by descent relationship at the level of means and of covariances between relatives, tends to show that allelic interactions are more important and nonallelic interactions are less important for a character closely related to fitness. For a complex character, these results lead to the conception of a genome organized in polygenic complementary blocks integrating epistasis and dominance. Some consequences for plant breeding are also discussed.

  15. Inbreeding avoidance influences the viability of reintroduced populations of African wild dogs (Lycaon pictus.

    Directory of Open Access Journals (Sweden)

    Penny A Becker

    Full Text Available The conservation of many fragmented and small populations of endangered African wild dogs (Lycaon pictus relies on understanding the natural processes affecting genetic diversity, demographics, and future viability. We used extensive behavioural, life-history, and genetic data from reintroduced African wild dogs in South Africa to (1 test for inbreeding avoidance via mate selection and (2 model the potential consequences of avoidance on population persistence. Results suggested that wild dogs avoided mating with kin. Inbreeding was rare in natal packs, after reproductive vacancies, and between sibling cohorts (observed on 0.8%, 12.5%, and 3.8% of occasions, respectively. Only one of the six (16.7% breeding pairs confirmed as third-order (or closer kin consisted of animals that were familiar with each other, while no other paired individuals had any prior association. Computer-simulated populations allowed to experience inbreeding had only a 1.6% probability of extinction within 100 years, whereas all populations avoiding incestuous matings became extinct due to the absence of unrelated mates. Populations that avoided mating with first-order relatives became extinct after 63 years compared with persistence of 37 and 19 years for those also prevented from second-order and third-order matings, respectively. Although stronger inbreeding avoidance maintains significantly more genetic variation, our results demonstrate the potentially severe demographic impacts of reduced numbers of suitable mates on the future viability of small, isolated wild dog populations. The rapid rate of population decline suggests that extinction may occur before inbreeding depression is observed.

  16. Proteomic characterization of inbreeding-related cold sensitivity in Drosophila melanogaster.

    Directory of Open Access Journals (Sweden)

    Cornelis J Vermeulen

    Full Text Available Inbreeding depression is a widespread phenomenon of central importance to agriculture, medicine, conservation biology and evolutionary biology. Although the population genetic principles of inbreeding depression are well understood, we know little about its functional genomic causes. To provide insight into the molecular interplay between intrinsic stress responses, inbreeding depression and temperature tolerance, we performed a proteomic characterization of a well-defined conditional inbreeding effect in a single line of Drosophila melanogaster, which suffers from extreme cold sensitivity and lethality. We identified 48 differentially expressed proteins in a conditional lethal line as compared to two control lines. These proteins were enriched for proteins involved in hexose metabolism, in particular pyruvate metabolism, and many were found to be associated with lipid particles. These processes can be linked to known cold tolerance mechanisms, such as the production of cryoprotectants, membrane remodeling and the build-up of energy reserves. We checked mRNA-expression of seven genes with large differential protein expression. Although protein expression poorly correlated with gene expression, we found a single gene (CG18067 that, after cold shock, was upregulated in the conditional lethal line both at the mRNA and protein level. Expression of CG18067 also increased in control flies after cold shock, and has previously been linked to cold exposure and chill coma recovery time. Many differentially expressed proteins in our study appear to be involved in cold tolerance in non-inbred individuals. This suggest the conditional inbreeding effect to be caused by misregulation of physiological cold tolerance mechanisms.

  17. Banded mongooses avoid inbreeding when mating with members of the same natal group.

    Science.gov (United States)

    Sanderson, Jennifer L; Wang, Jinliang; Vitikainen, Emma I K; Cant, Michael A; Nichols, Hazel J

    2015-07-01

    Inbreeding and inbreeding avoidance are key factors in the evolution of animal societies, influencing dispersal and reproductive strategies which can affect relatedness structure and helping behaviours. In cooperative breeding systems, individuals typically avoid inbreeding through reproductive restraint and/or dispersing to breed outside their natal group. However, where groups contain multiple potential mates of varying relatedness, strategies of kin recognition and mate choice may be favoured. Here, we investigate male mate choice and female control of paternity in the banded mongoose (Mungos mungo), a cooperatively breeding mammal where both sexes are often philopatric and mating between relatives is known to occur. We find evidence suggestive of inbreeding depression in banded mongooses, indicating a benefit to avoiding breeding with relatives. Successfully breeding pairs were less related than expected under random mating, which appeared to be driven by both male choice and female control of paternity. Male banded mongooses actively guard females to gain access to mating opportunities, and this guarding behaviour is preferentially directed towards less closely related females. Guard-female relatedness did not affect the guard's probability of gaining reproductive success. However, where mate-guards are unsuccessful, they lose paternity to males that are less related to the females than themselves. Together, our results suggest that both sexes of banded mongoose use kin discrimination to avoid inbreeding. Although this strategy appears to be rare among cooperative breeders, it may be more prominent in species where relatedness to potential mates is variable, and/or where opportunities for dispersal and mating outside of the group are limited. © 2015 John Wiley & Sons Ltd.

  18. Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds.

    Science.gov (United States)

    Zhang, Qianqian; Calus, Mario P L; Guldbrandtsen, Bernt; Lund, Mogens S; Sahana, Goutam

    2015-07-22

    Levels of inbreeding in cattle populations have increased in the past due to the use of a limited number of bulls for artificial insemination. High levels of inbreeding lead to reduced genetic diversity and inbreeding depression. Various estimators based on different sources, e.g., pedigree or genomic data, have been used to estimate inbreeding coefficients in cattle populations. However, the comparative advantage of using full sequence data to assess inbreeding is unknown. We used pedigree and genomic data at different densities from 50k to full sequence variants to compare how different methods performed for the estimation of inbreeding levels in three different cattle breeds. Five different estimates for inbreeding were calculated and compared in this study: pedigree based inbreeding coefficient (F(PED)); run of homozygosity (ROH)-based inbreeding coefficients (F(ROH)); genomic relationship matrix (GRM)-based inbreeding coefficients (F(GRM)); inbreeding coefficients based on excess of homozygosity (F(HOM)) and correlation of uniting gametes (F(UNI)). Estimates using ROH provided the direct estimated levels of autozygosity in the current populations and are free effects of allele frequencies and incomplete pedigrees which may increase in inaccuracy in estimation of inbreeding. The highest correlations were observed between F(ROH) estimated from the full sequence variants and the F(ROH) estimated from 50k SNP (single nucleotide polymorphism) genotypes. The estimator based on the correlation between uniting gametes (F(UNI)) using full genome sequences was also strongly correlated with F(ROH) detected from sequence data. Estimates based on ROH directly reflected levels of homozygosity and were not influenced by allele frequencies, unlike the three other estimates evaluated (F(GRM), F(HOM) and FU(NI)), which depended on estimated allele frequencies. F(PED) suffered from limited pedigree depth. Marker density affects ROH estimation. Detecting ROH based on 50k chip

  19. Emotional states after grooming interactions in Japanese macaques (Macaca fuscata).

    Science.gov (United States)

    Ueno, Masataka; Yamada, Kazunori; Nakamichi, Masayuki

    2015-11-01

    In animal societies, the effect of grooming interactions on anxiety reduction is unclear. This study examined the effects of giving and receiving grooming on anxiety reduction in free ranging female Japanese macaques (Macaca fuscata) by measuring rates of self-scratching as an index of anxiety. In this study, the authors used a focal-animal sampling method, targeting 17 females at Katsuyama, Okayama prefecture, Japan. They evaluated affiliative relationships, which were defined by standard proximity rates, and found that females' self-scratching rates were lower after grooming affiliated partners than during matched-control periods (occurring on another day, beginning at approximately the same time of day as the corresponding postgrooming period) and not after grooming unaffiliated partners. Moreover, regardless of affiliative relationships, self-scratching rates were lower after receiving grooming than during matched-control periods. These findings did not change after excluding data in which groomer and groomee were in proximity after the grooming interaction. In addition, multivariable analysis showed that affiliative relationships, but not kinship or rank distances, were related to differences in the rates of self-scratching between giving grooming and matched-control periods. In contrast, neither affiliative relationships nor kinship nor rank distances affected differences in self-scratching rates between receiving grooming and matched-control periods. Therefore, individuals' anxiety levels decreased both after giving grooming to affiliated partners and after receiving grooming, regardless of affiliative relationships. This is the first empirical study to support the notion that giving grooming to affiliated partners is self-rewarding in Japanese macaques.

  20. Temporomandibular joint forces measured at the condyle of Macaca arctoides.

    Science.gov (United States)

    Boyd, R L; Gibbs, C H; Mahan, P E; Richmond, A F; Laskin, J L

    1990-06-01

    Forces were measured at the articular surface of the temporomandibular joint (TMJ) condyle in two stump-tail monkeys (Macaca arctoides) during chewing, incisal biting, and drinking and also during aggressive behaviors. Force was measured with a thin piezoelectric foil transducer, which was cemented over the anterior and superior surfaces of the condyle. Wires from the upper and lower surfaces of the foil were insulated between two layers of Teflon tape and run subcutaneously to a telemetry unit, which was implanted in the upper back. Force applied across the foil by the condyle was detected by the telemetry unit and transmitted to an FM radio receiver outside the animal. The FM signals were received and demodulated, and a signal proportional to the force applied between the condyle and the TMJ fossa was displayed on a chart recorder. Data were collected over an 8-day period. The animals were not constrained. The TMJ was found to be load bearing. The greatest force of 39.0 lb (17.7 kg) was measured during feisty vocal aggression. Forces ranged as high as 34.5 lb (15.7 kg) during chewing and 28.5 lb (13.0 kg) during incisal biting. Forces were greater on the working (food) side than on the nonworking (balancing) side by average ratios of 1.4 to 2.6. A large unilateral interference at the most distal molar greatly disturbed chewing. It reduced TMJ forces by 50% or more, and the monkey refused to chew on the side opposite the interference.

  1. Interplay between habitat fragmentation and climate change : inbreeding affects the response to thermal stress in Drosophila melanogaster

    NARCIS (Netherlands)

    Joubert, D.; Bijlsma, R.

    2010-01-01

    Climate change, exerting thermal stress, and habitat destruction and fragmentation, resulting in genetic drift and inbreeding, are amongst the most disturbing human activities that endanger global biodiversity. We studied the interplay between these 2 processes using Drosophila melanogaster as a

  2. On the Adaptive Origins and Maladaptive Consequences of Human Inbreeding : Parasite Prevalence, Immune Functioning, and Consanguineous Marriage

    NARCIS (Netherlands)

    Hoben, Ashley D.; Buunk, Abraham P.; Fincher, Corey L.; Thornhill, Randy; Schaller, Mark

    2010-01-01

    We propose that consanguineous marriages arise adaptively in response to high parasite prevalence and function to maintain coadapted gene complexes and associated local adaptation that defend against local pathogens. Therefore, a greater prevalence of inbreeding by consanguineous marriage is

  3. Dicty_cDB: CHD329 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available 2205 Katze_MMPB2 Macaca mulatta cDNA clone IBIUW:21185 5' similar to Bases 76 to ...9110 Katze_MMIL Macaca mulatta cDNA clone IBIUW:16323 5' similar to Bases 37 to 932 highly similar to human ...267 Katze_MMBR Macaca mulatta cDNA clone IBIUW:8183 5' similar to Bases 84 to 861 highly similar to human CC

  4. The association of genotype-based inbreeding coefficient with a range of physical and psychological human traits.

    Science.gov (United States)

    Verweij, Karin J H; Abdellaoui, Abdel; Veijola, Juha; Sebert, Sylvain; Koiranen, Markku; Keller, Matthew C; Järvelin, Marjo-Riitta; Zietsch, Brendan P

    2014-01-01

    Across animal species, offspring of closely related mates exhibit lower fitness, a phenomenon called inbreeding depression. Inbreeding depression in humans is less well understood because mating between close relatives is generally rare and stigmatised, confounding investigation of its effect on fitness-relevant traits. Recently, the availability of high-density genotype data has enabled quantification of variation in distant inbreeding in 'outbred' human populations, but the low variance of inbreeding detected from genetic data in most outbred populations means large samples are required to test effects, and only a few traits have yet been studied. However, it is likely that isolated populations, or those with a small effective population size, have higher variation in inbreeding and therefore require smaller sample sizes to detect inbreeding effects. With a small effective population size and low immigration, Northern Finland is such a population. We make use of a sample of ∼5,500 'unrelated' individuals in the Northern Finnish Birth Cohort 1966 with known genotypes and measured phenotypes across a range of fitness-relevant physical and psychological traits, including birth length and adult height, body mass index (BMI), waist-to-hip ratio, blood pressure, heart rate, grip strength, educational attainment, income, marital status, handedness, health, and schizotypal features. We find significant associations in the predicted direction between individuals' inbreeding coefficient (measured by proportion of the genome in runs of homozygosity) and eight of the 18 traits investigated, significantly more than the one or two expected by chance. These results are consistent with inbreeding depression effects on a range of human traits, but further research is needed to replicate and test alternative explanations for these effects.

  5. The association of genotype-based inbreeding coefficient with a range of physical and psychological human traits.

    Directory of Open Access Journals (Sweden)

    Karin J H Verweij

    Full Text Available Across animal species, offspring of closely related mates exhibit lower fitness, a phenomenon called inbreeding depression. Inbreeding depression in humans is less well understood because mating between close relatives is generally rare and stigmatised, confounding investigation of its effect on fitness-relevant traits. Recently, the availability of high-density genotype data has enabled quantification of variation in distant inbreeding in 'outbred' human populations, but the low variance of inbreeding detected from genetic data in most outbred populations means large samples are required to test effects, and only a few traits have yet been studied. However, it is likely that isolated populations, or those with a small effective population size, have higher variation in inbreeding and therefore require smaller sample sizes to detect inbreeding effects. With a small effective population size and low immigration, Northern Finland is such a population. We make use of a sample of ∼5,500 'unrelated' individuals in the Northern Finnish Birth Cohort 1966 with known genotypes and measured phenotypes across a range of fitness-relevant physical and psychological traits, including birth length and adult height, body mass index (BMI, waist-to-hip ratio, blood pressure, heart rate, grip strength, educational attainment, income, marital status, handedness, health, and schizotypal features. We find significant associations in the predicted direction between individuals' inbreeding coefficient (measured by proportion of the genome in runs of homozygosity and eight of the 18 traits investigated, significantly more than the one or two expected by chance. These results are consistent with inbreeding depression effects on a range of human traits, but further research is needed to replicate and test alternative explanations for these effects.

  6. The different sources of variation in inbreeding depression, heterosis and outbreeding depression in a metapopulation of Physa acuta.

    Science.gov (United States)

    Escobar, Juan Sebastián; Nicot, Antoine; David, Patrice

    2008-11-01

    Understanding how parental distance affects offspring fitness, i.e., the effects of inbreeding and outbreeding in natural populations, is a major goal in evolutionary biology. While inbreeding is often associated with fitness reduction (inbreeding depression), interpopulation outcrossing may have either positive (heterosis) or negative (outbreeding depression) effects. Within a metapopulation, all phenomena may occur with various intensities depending on the focal population (especially its effective size) and the trait studied. However, little is known about interpopulation variation at this scale. We here examine variation in inbreeding depression, heterosis, and outbreeding depression on life-history traits across a full-life cycle, within a metapopulation of the hermaphroditic snail Physa acuta. We show that all three phenomena can co-occur at this scale, although they are not always expressed on the same traits. A large variation in inbreeding depression, heterosis, and outbreeding depression is observed among local populations. We provide evidence that, as expected from theory, small and isolated populations enjoy higher heterosis upon outcrossing than do large, open populations. These results emphasize the need for an integrated theory accounting for the effects of both deleterious mutations and genetic incompatibilities within metapopulations and to take into account the variability of the focal population to understand the genetic consequences of inbreeding and outbreeding at this scale.

  7. Temporal change in inbreeding depression in life-history traits in captive populations of guppy (Poecilia reticulata): evidence for purging?

    Science.gov (United States)

    Larsen, L-K; Pélabon, C; Bolstad, G H; Viken, A; Fleming, I A; Rosenqvist, G

    2011-04-01

    Inbreeding depression, which generally affects the fitness of small populations, may be diminished by purging recessive deleterious alleles when inbreeding persists over several generations. Evidence of purging remains rare, especially because of the difficulties of separating the effects of various factors affecting fitness in small populations. We compared the expression of life-history traits in inbred populations of guppy (Poecilia reticulata) with contemporary control populations over 10 generations in captivity. We estimated inbreeding depression as the difference between the two types of populations at each generation. After 10 generations, the inbreeding coefficient reached a maximum value of 0.56 and 0.16 in the inbred and control populations, respectively. Analysing changes in the life-history traits across generations showed that inbreeding depression in clutch size and offspring survival increased during the first four to six generations in the populations from the inbred treatment and subsequently decreased as expected if purging occurred. Inbreeding depression in two other traits was weaker but showed similar changes across generations. The loss of six populations in the inbred treatment indicates that removal of deleterious alleles also occurred by extinction of populations that presumably harboured high genetic load.

  8. Effect of inbreeding on juvenile mortality in some small mammal species.

    Science.gov (United States)

    Ralls, K; Ballou, J

    1982-04-01

    In breeding records for 12 species of small mammals from 9 families in 3 orders, individuals with an inbreeding coefficient of 0 were classified as non-inbred, those with inbreeding coefficients greater than 0 as inbred. Juvenile mortality was defined as all deaths prior to 1/2 of the age of sexual maturity for each species. It was significantly higher for inbred than for noninbred animals in 11 of the 12 species using a 1-tailed sign test, and by Fisher's exact test in 3 species. Monodelphis domestica, Wiedomys pyrrhorhinos and and Dolichotis salinicola. The higher mortality of inbred young of the species with the largest sample size, Elephantulus rufescens, was irrespective of litter size and of the parity of the dam.

  9. Autosomal recessive disorders in Saguenay-Lac-Saint-Jean (Quebec, Canada): a study of inbreeding.

    Science.gov (United States)

    De Braekeleer, M; Gauthier, S

    1996-01-01

    Saguenay Lac-Saint-Jean (SLSJ) is a geographically isolated region of northeastern Quebec in which several autosomal recessive disorders have a high incidence. We calculated the inbreeding coefficients of 567 probands and compared them to 1701 matched control individuals. The mean inbreeding coefficient of the group containing all 567 probands was 2.73 times higher than that of the controls (0.001772 versus 0.00065). Thirteen percent (75/567) of the probands were inbred, but only 5% were born to matings between spouses related as second-degree cousins or closer. No marriage between uncle and niece and only two marriages between first-degree cousins were identified in the disorder group. These results strongly suggest that the high incidence of the autosomal recessive disorders in SLSJ is the result of a founder effect.

  10. How much gene flow is needed to avoid inbreeding depression in wild tiger populations?

    Science.gov (United States)

    Kenney, John; Allendorf, Fred W; McDougal, Charles; Smith, James L D

    2014-08-22

    The number and size of tiger populations continue to decline owing to habitat loss, habitat fragmentation and poaching of tigers and their prey. As a result, tiger populations have become small and highly structured. Current populations have been isolated since the early 1970s or for approximately seven generations. The objective of this study is to explore how inbreeding may be affecting the persistence of remaining tiger populations and how dispersal, either natural or artificial, may reduce the potentially detrimental effect of inbreeding depression. We developed a tiger simulation model and used published levels of genetic load in mammals to simulate inbreeding depression. Following a 50 year period of population isolation, we introduced one to four dispersing male tigers per generation to explore how gene flow from nearby populations may reduce the negative impact of inbreeding depression. For the smallest populations, even four dispersing male tigers per generation did not increase population viability, and the likelihood of extinction is more than 90% within 30 years. Unless habitat connectivity is restored or animals are artificially introduced in the next 70 years, medium size wild populations are also likely to go extinct, with only four to five of the largest wild tiger populations likely to remain extant in this same period without intervention. To reduce the risk of local extinction, habitat connectivity must be pursued concurrently with efforts to increase population size (e.g. enhance habitat quality, increase habitat availability). It is critical that infrastructure development, dam construction and other similar projects are planned appropriately so that they do not erode the extent or quality of habitat for these populations so that they can truly serve as future source populations. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  11. How much gene flow is needed to avoid inbreeding depression in wild tiger populations?

    OpenAIRE

    Kenney, John; Allendorf, Fred W.; McDougal, Charles; Smith, James L. D.

    2014-01-01

    The number and size of tiger populations continue to decline owing to habitat loss, habitat fragmentation and poaching of tigers and their prey. As a result, tiger populations have become small and highly structured. Current populations have been isolated since the early 1970s or for approximately seven generations. The objective of this study is to explore how inbreeding may be affecting the persistence of remaining tiger populations and how dispersal, either natural or artificial, may reduc...

  12. Decoding an olfactory mechanism of kin recognition and inbreeding avoidance in a primate

    Science.gov (United States)

    2009-01-01

    Background Like other vertebrates, primates recognize their relatives, primarily to minimize inbreeding, but also to facilitate nepotism. Although associative, social learning is typically credited for discrimination of familiar kin, discrimination of unfamiliar kin remains unexplained. As sex-biased dispersal in long-lived species cannot consistently prevent encounters between unfamiliar kin, inbreeding remains a threat and mechanisms to avoid it beg explanation. Using a molecular approach that combined analyses of biochemical and microsatellite markers in 17 female and 19 male ring-tailed lemurs (Lemur catta), we describe odor-gene covariance to establish the feasibility of olfactory-mediated kin recognition. Results Despite derivation from different genital glands, labial and scrotal secretions shared about 170 of their respective 338 and 203 semiochemicals. In addition, these semiochemicals encoded information about genetic relatedness within and between the sexes. Although the sexes showed opposite seasonal patterns in signal complexity, the odor profiles of related individuals (whether same-sex or mixed-sex dyads) converged most strongly in the competitive breeding season. Thus, a strong, mutual olfactory signal of genetic relatedness appeared specifically when such information would be crucial for preventing inbreeding. That weaker signals of genetic relatedness might exist year round could provide a mechanism to explain nepotism between unfamiliar kin. Conclusion We suggest that signal convergence between the sexes may reflect strong selective pressures on kin recognition, whereas signal convergence within the sexes may arise as its by-product or function independently to prevent competition between unfamiliar relatives. The link between an individual's genome and its olfactory signals could be mediated by biosynthetic pathways producing polymorphic semiochemicals or by carrier proteins modifying the individual bouquet of olfactory cues. In conclusion, we

  13. Demographic consequences of inbreeding and outbreeding in Arnica montana: A field experiment

    Science.gov (United States)

    Luijten, S.H.; Kery, M.; Oostermeijer, J.G.B.; Den, Nijs H.J.C.M.

    2002-01-01

    1. The genetic constitution of populations may significantly affect demography. Founder populations or isolated remnants may show inbreeding depression, while established populations can be strongly adapted to the local environment. Gene exchange between populations can lead to better performance if heterozygosity levels are restored (heterosis), or to reduced performance if coadapted gene complexes are disrupted (outbreeding depression). 2. Five populations of the self-incompatible perennial Arnica montana (Asteraceae) were analysed for the demographic consequences of inbreeding and of intra- and interpopulation outcrossing, using both small and large populations as donors for the latter. We analysed seed production and seed weight and monitored growth, survival and flowering of offspring introduced as seeds and as 4-week-old seedlings in a 4-year field experiment. 3. Reduced seed set after selfing was probably due to the self-incompatibility system rather than to inbreeding depression. There was a significant increase for seed set after interpopulation crosses, which resulted from the alleviation of low mate availability in one of the small populations. 4. Significant inbreeding depression was observed for growth rates of plants introduced as seedlings. We found significant heterosis for flowering probability of plants introduced as seeds, but for plants introduced as seedlings, heterosis for seedling size and flowering probability was only marginally significant. Outbreeding depression was not observed. 5. The results of this study are important for reinforcement measures in small, remnant populations. Significant differences among populations for all measured fitness components suggest that reinforcement is best achieved using material from several populations. 6. The observed higher survival of seedlings as compared with seeds suggests that it is better to plant individuals than to sow. Sowing, however, is easier and cheaper, and was more likely to eliminate

  14. Decoding an olfactory mechanism of kin recognition and inbreeding avoidance in a primate

    Directory of Open Access Journals (Sweden)

    Charpentier Marie JE

    2009-12-01

    Full Text Available Abstract Background Like other vertebrates, primates recognize their relatives, primarily to minimize inbreeding, but also to facilitate nepotism. Although associative, social learning is typically credited for discrimination of familiar kin, discrimination of unfamiliar kin remains unexplained. As sex-biased dispersal in long-lived species cannot consistently prevent encounters between unfamiliar kin, inbreeding remains a threat and mechanisms to avoid it beg explanation. Using a molecular approach that combined analyses of biochemical and microsatellite markers in 17 female and 19 male ring-tailed lemurs (Lemur catta, we describe odor-gene covariance to establish the feasibility of olfactory-mediated kin recognition. Results Despite derivation from different genital glands, labial and scrotal secretions shared about 170 of their respective 338 and 203 semiochemicals. In addition, these semiochemicals encoded information about genetic relatedness within and between the sexes. Although the sexes showed opposite seasonal patterns in signal complexity, the odor profiles of related individuals (whether same-sex or mixed-sex dyads converged most strongly in the competitive breeding season. Thus, a strong, mutual olfactory signal of genetic relatedness appeared specifically when such information would be crucial for preventing inbreeding. That weaker signals of genetic relatedness might exist year round could provide a mechanism to explain nepotism between unfamiliar kin. Conclusion We suggest that signal convergence between the sexes may reflect strong selective pressures on kin recognition, whereas signal convergence within the sexes may arise as its by-product or function independently to prevent competition between unfamiliar relatives. The link between an individual's genome and its olfactory signals could be mediated by biosynthetic pathways producing polymorphic semiochemicals or by carrier proteins modifying the individual bouquet of

  15. Gene : CBRC-SARA-01-1167 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available ctin receptor 1 isoform 3 [Macaca mulatta] ref|XP_001105751.1| PREDICTED: similar to adiponectin... receptor 1 isoform 4 [Macaca mulatta] ref|XP_001105805.1| PREDICTED: similar to adiponectin re...ceptor 1 isoform 5 [Macaca mulatta] ref|XP_001105878.1| PREDICTED: similar to adiponectin... receptor 1 isoform 6 [Macaca mulatta] ref|XP_001105957.1| PREDICTED: similar to adiponectin recepto...CBRC-SARA-01-1167 Novel UN B UNKNOWN ADR1_HUMAN 1e-139 67% ref|XP_001105680.1| PREDICTED: similar to adipone

  16. Gene : CBRC-PABE-03-0023 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CTED: similar to Neurogenic locus notch homolog protein 1 precursor (Notch 1) [Macaca mulatta] 2e-33 36% MHYNCIIIVVIIQCIIIVVIIQCIIIVF...IIQCIIIVFIIQCIIIVFIVHCIIIVFIVHCIIIVFIVQCIIIVFIVQCIIIVFIVQCIIIVFIVQCIIIVFIVQCIIIVFIVQCIIIVFIVQCIVIVFIVQCIVIVF...IVQCIVIVFIVQCIVIVFIVQCIVIVFIVQCIVIVFIVQCIIIVFIVQCIIIVL ...

  17. Gene : CBRC-PTRO-08-0056 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available ED: similar to ZC178.1, partial [Macaca mulatta] 9e-74 64% MLTGILVNGVLPSLGVEVGMLVPSAVVGDELAAVEVVTSMLVSTGVVER...VLASELATGVVLTGILLNVVLPSLRVEVGMLLPSAVVGEELASPEVVTGVLLSSGVVERVLASEPATGMVLTSILVNGVLTSLGVEIGMLVPSAVVGEELPSVEVVTGMLVLTGVVER...VLASELATSMVLTGILVNGVLLSLGVEVGMLLPSAVVGDEWASVEVVTALLVSTGVVERVLIAELATGVVLTSILVNGMLPS ...

  18. Gene : CBRC-MMUR-01-1490 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available ICTED: similar to C28H8.3 [Macaca mulatta] 5e-29 94% MSGRAGRRGQDLLGDVYFFDIPFPKIGKLIKSNVPELRGQFPLSTTLILRLMLLASKGDDPEDAQAKVRAARHLWLPVC...GSLVRLPVCGSLVRLPVCGSLSAAPWRGSCLWLPVCGSLSVAPCLQLPVCGSLSASPCLGLPVCGSLSEAPCLRLPVWGSLSAA...PCKKLPVSSCAAPWRGSLSAAPCLWLPVCSSLARLPVCGSPVCGSLVRLPVCSSLSAAPCLRLPGVAPVCGSLSVASCLWL

  19. GESP: A computer program for modeling genetic effective population size, inbreeding, and divergence in substructured populations.

    Science.gov (United States)

    Olsson, Fredrik; Laikre, Linda; Hössjer, Ola; Ryman, Nils

    2017-03-24

    The genetically effective population size (Ne) is of key importance for quantifying rates of inbreeding and genetic drift, and is often used in conservation management to set targets for genetic viability. The concept was developed for single, isolated populations and the mathematical means for analyzing the expected Ne in complex, subdivided populations have previously not been available. We recently developed such analytical theory and central parts of that work have now been incorporated into a freely available software tool presented here. GESP (Genetic Effective population size, inbreeding, and divergence in Substructured Populations) is R-based and designed to model short and long term patterns of genetic differentiation and effective population size of subdivided populations. The algorithms performed by GESP allow exact computation of global and local inbreeding and eigenvalue effective population size, predictions of genetic divergence among populations (GST) as well as departures from random mating (FIS, FIT) while varying i) subpopulation census and effective size, separately or including trend of the global population size, ii) rate and direction of migration between all pairs of subpopulations, iii) degree of relatedness and divergence among subpopulations, iv) ploidy (haploid or diploid), and v) degree of selfing. Here, we describe GESP and exemplify its use in conservation genetics modeling. This article is protected by copyright. All rights reserved.

  20. Mutual mate choice: when it pays both sexes to avoid inbreeding.

    Science.gov (United States)

    Lihoreau, Mathieu; Zimmer, Cédric; Rivault, Colette

    2008-01-01

    Theoretical models of sexual selection predict that both males and females of many species should benefit by selecting their mating partners. However, empirical evidence testing and validating this prediction is scarce. In particular, whereas inbreeding avoidance is expected to induce sexual conflicts, in some cases both partners could benefit by acting in concert and exerting mutual mate choice for non-assortative pairings. We tested this prediction with the gregarious cockroach Blattella germanica (L.). We demonstrated that males and females base their mate choice on different criteria and that choice occurs at different steps during the mating sequence. Males assess their relatedness to females through antennal contacts before deciding to court preferentially non-siblings. Conversely, females biased their choice towards the most vigorously courting males that happened to be non-siblings. This study is the first to demonstrate mutual mate choice leading to close inbreeding avoidance. The fact that outbred pairs were more fertile than inbred pairs strongly supports the adaptive value of this mating system, which includes no "best phenotype" as the quality of two mating partners is primarily linked to their relatedness. We discuss the implications of our results in the light of inbreeding conflict models.

  1. Subsocial Cockroaches Nauphoeta cinerea Mate Indiscriminately with Kin Despite High Costs of Inbreeding

    Science.gov (United States)

    Bouchebti, Sofia; Durier, Virginie; Pasquaretta, Cristian; Rivault, Colette; Lihoreau, Mathieu

    2016-01-01

    Many animals have evolved strategies to reduce risks of inbreeding and its deleterious effects on the progeny. In social arthropods, such as the eusocial ants and bees, inbreeding avoidance is typically achieved by the dispersal of breeders from their native colony. However studies in presocial insects suggest that kin discrimination during mate choice may be a more common mechanism in socially simpler species with no reproductive division of labour. Here we examined this possibility in the subsocial cockroach Nauphoeta cinerea, a model species for research in sexual selection, where males establish dominance hierarchies to access females and control breeding territories. When given a binary choice between a sibling male and a non-sibling male that had the opportunity to establish a hierarchy prior to the tests, females mated preferentially with the dominant male, irrespective of kinship or body size. Despite the lack of kin discrimination during mate choice, inbred-mated females incurred significant fitness costs, producing 20% less offspring than outbred-mated females. We discuss how the social mating system of this territorial cockroach may naturally limit the probability of siblings to encounter and reproduce, without the need for evolving active inbreeding avoidance mechanisms, such as kin recognition. PMID:27655156

  2. On the widespread capacity for, and functional significance of, extreme inbreeding in ferns.

    Science.gov (United States)

    Sessa, Emily B; Testo, Weston L; Watkins, James E

    2016-08-01

    Homosporous vascular plants utilize three different mating systems, one of which, gametophytic selfing, is an extreme form of inbreeding only possible in homosporous groups. This mating system results in complete homozygosity in all progeny and has important evolutionary and ecological implications. Ferns are the largest group of homosporous land plants, and the significance of extreme inbreeding for fern evolution has been a subject of debate for decades. We cultured gametophytes in the laboratory and quantified the relative frequencies of sporophyte production from isolated and paired gametophytes, and examined associations between breeding systems and several ecological and evolutionary traits. The majority of fern species studied show a capacity for gametophytic selfing, producing sporophytes from both isolated and paired gametophytes. While we did not follow sporophytes to maturity to investigate potential detrimental effects of homozygosity at later developmental stages, our results suggest that gametophytic selfing may have greater significance for fern evolution and diversification than has previously been realized. We present evidence from the largest study of mating behavior in ferns to date that the capacity for extreme inbreeding is prevalent in this lineage, and we discuss its implications and relevance and make recommendations for future studies of fern mating systems.

  3. Inbreeding and its effect on some productive traits in buffaloes of South Iran

    Directory of Open Access Journals (Sweden)

    B. Mahmoodi

    2010-02-01

    Full Text Available The buffalo is a native animal of Iran and there were 500,000 buffaloes in Iran that over 80 per cent of its population concentrated in the north and north- west (Azerbaijan province and 18 per cent in the south (Khuzestan province of the country. Buffaloes reread in rural condition as multi purpose animals in Khuzestan. For mating, farmer use owns herd sire also artificial insemination is limited in the rural condition that may be inbred animals so affect the production performance. The aim of this investigation was estimate the inbreeding coefficient and its affect on some production performance. Data of 200 herds were used from the record sheets of herds under recording program of Animal Breeding Center during period 1990 to 2002 in the Khuzestan province. These results showed mostly herds only one sir and rarely two sires have been used. Inbreeding coefficient was 25 percent in some progeny and high-inbred buffaloes had a low performance. According to results of this study it could be concluded that farmers to avoid inbreeding should use other herd sire and artificial insemination also practical recording scheme and genetically selection to genetic improvement should be included in buffaloes of Iran.

  4. Mutual mate choice: when it pays both sexes to avoid inbreeding.

    Directory of Open Access Journals (Sweden)

    Mathieu Lihoreau

    Full Text Available Theoretical models of sexual selection predict that both males and females of many species should benefit by selecting their mating partners. However, empirical evidence testing and validating this prediction is scarce. In particular, whereas inbreeding avoidance is expected to induce sexual conflicts, in some cases both partners could benefit by acting in concert and exerting mutual mate choice for non-assortative pairings. We tested this prediction with the gregarious cockroach Blattella germanica (L.. We demonstrated that males and females base their mate choice on different criteria and that choice occurs at different steps during the mating sequence. Males assess their relatedness to females through antennal contacts before deciding to court preferentially non-siblings. Conversely, females biased their choice towards the most vigorously courting males that happened to be non-siblings. This study is the first to demonstrate mutual mate choice leading to close inbreeding avoidance. The fact that outbred pairs were more fertile than inbred pairs strongly supports the adaptive value of this mating system, which includes no "best phenotype" as the quality of two mating partners is primarily linked to their relatedness. We discuss the implications of our results in the light of inbreeding conflict models.

  5. Severe Inbreeding and Small Effective Number of Breeders in a Formerly Abundant Marine Fish

    Science.gov (United States)

    O'Leary, Shannon J.; Hice, Lyndie A.; Feldheim, Kevin A.; Frisk, Michael G.; McElroy, Anne E.; Fast, Mark D.; Chapman, Demian D.

    2013-01-01

    In contrast to freshwater fish it is presumed that marine fish are unlikely to spawn with close relatives due to the dilution effect of large breeding populations and their propensity for movement and reproductive mixing. Inbreeding is therefore not typically a focal concern of marine fish management. We measured the effective number of breeders in 6 New York estuaries for winter flounder (Pseudopleuronectes americanus), a formerly abundant fish, using 11 microsatellite markers (6–56 alleles per locus). The effective number of breeders for 1–2 years was remarkably small, with point estimates ranging from 65–289 individuals. Excess homozygosity was detected at 10 loci in all bays (FIS = 0.169–0.283) and individuals exhibited high average internal relatedness (IR; mean = 0.226). These both indicate that inbreeding is very common in all bays, after testing for and ruling out alternative explanations such as technical and sampling artifacts. This study demonstrates that even historically common marine fish can be prone to inbreeding, a factor that should be considered in fisheries management and conservation plans. PMID:23762473

  6. Negative inbreeding effects in tree fruit breeding: self-compatibility transmission in almond.

    Science.gov (United States)

    Alonso Segura, J M; Socias I Company, R

    2007-07-01

    Inbreeding depression has been observed in most fruit trees, negatively affecting the offspring of related parents. This problem is steadily increasing due to the repeated utilization of parents in breeding programmes. In almond, self-compatibility transmission from 'Tuono' to its offspring remains partially unexplained due to deviations from the expected genotype ratios. In order to test if these deviations could be due to inbreeding, the S-genotypes of the seedlings of four almond families, 'Tuono' (S(1)S(f )) x 'Ferragnès' (S(1)S(3)), 'Tuono' (S(1)S(f)) x 'Ferralise' (S(1)S(3)) and reciprocal crosses were studied. The S-genotype determination of each seedling by separation of stylar S-RNases and by S-allele-specific PCR amplification gave identical results. The ratio of S-genotypes of the family 'Tuono' x 'Ferralise' was the one least adjusted to the expected 1:1 ratio, because the number of self-compatible seedlings (S(f)S(3)) was less than a half the number of self-incompatible ones (S(1)S(3)). A mechanism acting against inbreeding would favour cross-breeding in the following generation to increase heterozygosity. This fact stresses the need to avoid crosses between related parents in fruit breeding programmes.

  7. Inbreeding affects sexual signalling in males but not females of Tenebrio molitor.

    Science.gov (United States)

    Pölkki, Mari; Krams, Indrikis; Kangassalo, Katariina; Rantala, Markus J

    2012-06-23

    In many species of animals, individuals advertise their quality with sexual signals to obtain mates. Chemical signals such as volatile pheromones are species specific, and their primary purpose is to influence mate choice by carrying information about the phenotypic and genetic quality of the sender. The deleterious effects of consanguineous mating on individual quality are generally known, whereas the effect of inbreeding on sexual signalling is poorly understood. Here, we tested whether inbreeding reduces the attractiveness of sexual signalling in the mealworm beetle, Tenebrio molitor, by testing the preferences for odours of inbred and outbred (control) individuals of the opposite sex. Females were more attracted to the odours produced by outbred males than the odours produced by inbred males, suggesting that inbreeding reduces the attractiveness of male sexual signalling. However, we did not find any difference between the attractiveness of inbred and outbred female odours, which may indicate that the quality of females is either irrelevant for T. molitor males or quality is not revealed through female odours.

  8. Depression by inbreeding after four sucessive self-pollination squash generations

    Directory of Open Access Journals (Sweden)

    Cardoso Antonio Ismael Inácio

    2004-01-01

    Full Text Available The strategy for breeding F1 hybrid squash is to develop parental lines through self-pollination. However, it increases plant mean homozygosis, which is not the natural genetic state of a cross-pollinated species, and can cause "inbreeding depression". The objective of this work was to evaluate this depression with sucessive generations of self-pollination (without selection in Cucurbita moschata, cv. Piramoita. Populations were obtained from lines with one to four generations of self-pollination (obtained by the SSD method, from the original cv. Piramoita (population S0. Randomized blocks were used with five treatments (different generations of self-pollination - S0 to S4, six replicates and five plants per plot. Regression analysis was made by the Wright inbreeding coefficient (F to measure the homozygosis level effect on vigor loss. There was a linear reduction of mean weight and fruit length, seed production (number and weight per fruit with the increase of the homozygosis level; however inbreeding did not affect seed quality (weight of 100 seeds and germination.

  9. Severe inbreeding and small effective number of breeders in a formerly abundant marine fish.

    Directory of Open Access Journals (Sweden)

    Shannon J O'Leary

    Full Text Available In contrast to freshwater fish it is presumed that marine fish are unlikely to spawn with close relatives due to the dilution effect of large breeding populations and their propensity for movement and reproductive mixing. Inbreeding is therefore not typically a focal concern of marine fish management. We measured the effective number of breeders in 6 New York estuaries for winter flounder (Pseudopleuronectes americanus, a formerly abundant fish, using 11 microsatellite markers (6-56 alleles per locus. The effective number of breeders for 1-2 years was remarkably small, with point estimates ranging from 65-289 individuals. Excess homozygosity was detected at 10 loci in all bays (FIS = 0.169-0.283 and individuals exhibited high average internal relatedness (IR; mean = 0.226. These both indicate that inbreeding is very common in all bays, after testing for and ruling out alternative explanations such as technical and sampling artifacts. This study demonstrates that even historically common marine fish can be prone to inbreeding, a factor that should be considered in fisheries management and conservation plans.

  10. Meiotic recombination shapes precision of pedigree- and marker-based estimates of inbreeding.

    Science.gov (United States)

    Knief, U; Kempenaers, B; Forstmeier, W

    2017-03-01

    The proportion of an individual's genome that is identical by descent (GWIBD) can be estimated from pedigrees (inbreeding coefficient 'Pedigree F') or molecular markers ('Marker F'), but both estimators come with error. Assuming unrelated pedigree founders, Pedigree F is the expected proportion of GWIBD given a specific inbreeding constellation. Meiotic recombination introduces variation around that expectation (Mendelian noise) and related pedigree founders systematically bias Pedigree F downward. Marker F is an estimate of the actual proportion of GWIBD but it suffers from the sampling error of markers plus the error that occurs when a marker is homozygous without reflecting common ancestry (identical by state). We here show via simulation of a zebra finch and a human linkage map that three aspects of meiotic recombination (independent assortment of chromosomes, number of crossovers and their distribution along chromosomes) contribute to variation in GWIBD and thus the precision of Pedigree and Marker F. In zebra finches, where the genome contains large blocks that are rarely broken up by recombination, the Mendelian noise was large (nearly twofold larger s.d. values compared with humans) and Pedigree F thus less precise than in humans, where crossovers are distributed more uniformly along chromosomes. Effects of meiotic recombination on Marker F were reversed, such that the same number of molecular markers yielded more precise estimates of GWIBD in zebra finches than in humans. As a consequence, in species inheriting large blocks that rarely recombine, even small numbers of microsatellite markers will often be more informative about inbreeding and fitness than large pedigrees.

  11. The effect of sex-biased dispersal on opposite-sexed spatial genetic structure and inbreeding risk.

    Science.gov (United States)

    Blyton, Michaela D J; Banks, Sam C; Peakall, Rod

    2015-04-01

    Natal sex-biased dispersal has long been thought to reduce the risk of inbreeding by spatially separating opposite-sexed kin. Yet, comprehensive and quantitative evaluations of this hypothesis are lacking. In this study, we quantified the effectiveness of sex-biased dispersal as an inbreeding avoidance strategy by combining spatially explicit simulations and empirical data. We quantified the extent of kin clustering by measuring the degree of spatial autocorrelation among opposite-sexed individuals (FM structure). This allowed us to systematically explore how the extent of sex-biased dispersal, generational overlap, and mate searching distance, influenced both kin clustering, and the resulting inbreeding in the absence of complementary inbreeding avoidance strategies. Simulations revealed that when sex-biased dispersal was limited, positive FM genetic structure developed quickly and increased as the mate searching distance decreased or as generational overlap increased. Interestingly, complete long-range sex-biased dispersal did not prevent the development of FM genetic structure when generations overlapped. We found a very strong correlation between FM genetic structure and both FIS under random mating, and pedigree-based measures of inbreeding. Thus, we show that the detection of FM genetic structure can be a strong indicator of inbreeding risk. Empirical data for two species with different life history strategies yielded patterns congruent with our simulations. Our study illustrates a new application of spatial genetic autocorrelation analysis that offers a framework for quantifying the risk of inbreeding that is easily extendable to other species. Furthermore, our findings provide other researchers with a context for interpreting observed patterns of opposite-sexed spatial genetic structure.

  12. STEREOLOGICAL ANALYSIS OF THE COCHLEAR NUCLEI OF MONKEY (MACACA FASCICULARIS AFTER DEAFFERENTATION

    Directory of Open Access Journals (Sweden)

    Ana M Insausti

    2011-05-01

    Full Text Available The cochlear nuclei (CN in the brainstem receive the input signals from the inner ear through the cochlear nerve, and transmit these signals to higher auditory centres. A variety of lesions of the cochlear nerve cause deafness. As reported in the literature, artificial removal of auditive input, or 'deafferentation', induces structural alterations in the CN. The purpose of this study was to estimate a number of relevant stereological parameters of the CN in control and deafferented Macaca fascicularis monkeys.

  13. Construction and Validation of a Systematic Ethogram of Macaca fascicularis in a Free Enclosure

    OpenAIRE

    Fan Xu; Liang Xie; Xin Li; Qi Li; Tao Wang; Yongjia Ji; Fei Kong; Qunlin Zhan; Ke Cheng; Liang Fang; Peng Xie

    2012-01-01

    Behavioral studies in non-human primates have become ideal models for further investigations into advanced cognitive function in humans. To date, there is no systematic ethogram of the cynomolgus monkey (Macaca fascicularis) in a free enclosure. In a field observation of 6012 subjects, 107 distinct behaviors of M. fascicularis were preliminarily described. 83 of these behaviors were then independently validated through a randomized cohort and classified into 12 behavioral categories. 53 of th...

  14. Evidence for inbreeding depression in the food-deceptive colour-dimorphic orchid Dactylorhiza sambucina (L.) Soò.

    Science.gov (United States)

    Juillet, N; Dunand-Martin, S; Gigord, L D B

    2007-01-01

    About one third of all orchid species are deceptive, i.e., not providing any reward to their pollinator. Such species often have lower visitation rates compared to rewarding relatives. This could result in lower levels of geitonogamous selfing and thus would provide an advantage in term of progeny fitness through inbreeding avoidance. This hypothesis could be tested by comparing the level of inbreeding depression between deceptive and rewarding orchids. However, due to the difficulty to raise orchids from seeds, few studies of inbreeding depression are available, and most are focused on very early life stages, such as seed mass or embryo viability. Here, we present the results from an experimental investigation of inbreeding depression in the deceptive flower-colour dimorphic Dactylorhiza sambucina, from in vitro cultivation to greenhouse soil transplantation. We found strong inbreeding depression at all recorded stages (i.e., germination and survival), with estimates ranging from 0.47 to 0.75. Our study finally proposes a simple and suitable experimental protocol to raise orchids from seeds with high germination rates.

  15. Probing around implants and teeth with healthy or inflamed peri-implant mucosa/gingival. A histologic comparison in cynomolgus monkeys. (Macaca fascicularis)

    DEFF Research Database (Denmark)

    Schou, Søren; Holmstrup, Palle; Stoltze, K.

    2002-01-01

    Osseointegrated oral implants; teeth; phathology; peri-implant mucositis; gingivitis; peri-implantitis; periodontitis; diagnosis; probing depth; non-human primates; cynomolgus monkeys: Macaca fascicularis......Osseointegrated oral implants; teeth; phathology; peri-implant mucositis; gingivitis; peri-implantitis; periodontitis; diagnosis; probing depth; non-human primates; cynomolgus monkeys: Macaca fascicularis...

  16. Inbreeding depression on growth and survival of full-sib family of Manila clam ( Ruditapes philippinarum)

    Science.gov (United States)

    Huo, Zhongming; Li, Na; Zhang, Xuekai; Li, Ying; Yan, Xiwu; Yang, Feng

    2017-02-01

    In present study, the inbreeding depression ( ID) of growth and survival of Manila clam (Ruditapes philippinarum) was investigated at larval and juvenile stages. Nine inbred families ( A 2, B 2, C 2, D 2, E 2, F 2, G 2, H 2 and I 2) were established by mating within nine full-sib families with expected inbreeding coefficient of 0.25. Inbred families showed significant differences in shell length and hatching rate of D-larvae (straight-hinged larvae). The larvae of the nine inbred families grew slower than those of control group ( CG), and their ID value ranged from 0.81% ± 6.09% to 16.10% ± 1.49%. The ID value of larval survival rate varied between 27.47% ± 9.36% and 70.50% ± 13.66%. The ID was also detected for juvenile growth in A 2, B 2, C 2, and D 2, which ranged from 4.60 ± 2.21 to 17.71 ± 7.73. The A 2 family maintained the highest juvenile survival rate, whereas the other inbred families exhibited ID values varying between 62.79% ± 4.54% and 96.14% ± 0.87%. The linear relationship of estimated ID between growth and survival was negatively correlated ( R = -0.434, P < 0.05). The results of this study suggested that the ID of growth was common at the larval stage but was less prevalent at juvenile stage. In contrast, the ID of survival increased from larval to juvenile stage. A better understanding of the effect of inbreeding may aid to selective breeding of Manila clam.

  17. Pedigree analysis of the Turkish Arab horse population: structure, inbreeding and genetic variability.

    Science.gov (United States)

    Duru, S

    2017-09-01

    The aim of this study was to evaluate genetic variability in the Turkish Arab horse population using pedigree information. This study is the first detailed pedigree analysis of the breed in Turkey. Pedigree data were collected from the National Studbook. The pedigree data for 23 668 horses, born between 1904 and 2014, were used in the analysis. From this data set, a reference population (RP) of 14 838 animals symbolising the last generation was defined. Demographic parameters, the inbreeding level (F), the average relatedness (AR), the effective population size (N e), the effective number of founders (f e), the effective number of ancestors (f a) and the number of founder genome equivalents (f g) were calculated for the population. The average generation interval for the RP was 12.2±4.6 years, whereas the calculated pedigree completeness levels were 98.2%, 96.6% and 95.0% for the first, second and third known generations. The mean equivalent generations (t), the average complete generations and the mean maximum generations for the RP were 7.8, 5.4 and 12.2, respectively, whereas the mean F and AR were 4.6% and 9.5% for the RP. The rate of inbred animals was 94.2% for the RP, whereas the number of founders, the number of ancestors and the f e, f a and f g were 342, 223, 40, 22 and 9.6 for the RP. The large differences observed between f e, and the number of founders demonstrates that genetic diversity decreased between the founder and the RP. Contribution of the 14 most influential founder to the RP was 50.0%, whereas just eight ancestral horses can account for 50% of the genetic variability. N e estimated via an individual increase in inbreeding per generation ( $$ \\hskip3pt{\\bar{\\hskip-2ptN}_{{\\rm e}} } $$ ), and paired increase in coancestry $$\\left(\\! \\hskip3pt{\\bar{\\hskip-2ptN}_{{ eC}} } \\right)$$ , were 74.4±3.9 and 73.5±0.58, respectively. The inbreeding increases with the pedigree knowledge. In addition, the decrease in inbreeding in last years

  18. Marker Assisted Selection can Reduce True as well as Pedigree Estimated Inbreeding

    DEFF Research Database (Denmark)

    Pedersen, L D; Sørensen, A C; Berg, P

    2009-01-01

    This study investigated whether selection using genotype information reduced the rate and level of true inbreeding, that is, identity by descent, at a selectively neutral locus as well as a locus under selection compared with traditional BLUP selection. In addition, the founder representation...... at these loci and the within-family selection at the nonneutral locus were studied. The study was carried out using stochastic simulation of a population resembling the breeding nucleus of a dairy cattle population for 25 yr. Each year, 10 proven bulls were selected across herds along with 100 dams from within...

  19. Inbreeding effects on palmar dermatoglyphic characters in three endogamous social groups of West Bengal, India.

    Science.gov (United States)

    Banik, S Datta

    2014-02-01

    The present study reports inbreeding effects on mean palmar dermatoglyphic characteristics: triradial count on palm, maximal atd angle, adt angle, td ridge count, ab ridge count, main line index (MLI) and ab ridge breadth. Samples were drawn from adult males belonging to three endogamous sections representing Hindu caste Telaga of Kharagpur (West Midnapore), Ansari Muslims of Nandigram (East Midnapore) and Sheik-Sunni Muslims of Braddhaman in West Bengal, India. Consistent trend of higher mean triradial number, adt angle, and lower mean td ridge count, ab ridge count, and ab ridge breadth was observed in inbred sections compared to their non-inbred relatives in three social groups.

  20. Slow inbred lines of Drosophila melanogaster express as much inbreeding depression as fast inbred lines under semi-natural conditions

    DEFF Research Database (Denmark)

    Kristensen, Torsten Nygård; Knudsen, Morten Ravn; Loeschcke, Volker

    2011-01-01

    Selection may reduce the deleterious consequences of inbreeding. This may be due to purging of recessive deleterious alleles or balancing selection favouring heterozygote offspring. Such selection is expected to be more efficient at slower compared to at faster rates of inbreeding. In this study ...

  1. Slow inbred lines of Drosophila melanogaster express as much inbreeding depression as fast inbred lines under semi-natural conditions

    DEFF Research Database (Denmark)

    Kristensen, Torsten Nygård; Knudsen, Morten Ravn; Loeschcke, Volker

    2011-01-01

    Selection may reduce the deleterious consequences of inbreeding. This may be due to purging of recessive deleterious alleles or balancing selection favouring heterozygote offspring. Such selection is expected to be more efficient at slower compared to at faster rates of inbreeding. In this study ...

  2. The contribution of dominance and inbreeding depression in estimating variance components for litter size in Pannon White rabbits.

    Science.gov (United States)

    Nagy, I; Gorjanc, G; Curik, I; Farkas, J; Kiszlinger, H; Szendrő, Zs

    2013-08-01

    In a synthetic closed population of Pannon White rabbits, additive (VA ), dominance (VD ) and permanent environmental (VPe ) variance components as well as doe (bF d ) and litter (bF l ) inbreeding depression were estimated for the number of kits born alive (NBA), number of kits born dead (NBD) and total number of kits born (TNB). The data set consisted of 18,398 kindling records of 3883 does collected from 1992 to 2009. Six models were used to estimate dominance and inbreeding effects. The most complete model estimated VA and VD to contribute 5.5 ± 1.1% and 4.8 ± 2.4%, respectively, to total phenotypic variance (VP ) for NBA; the corresponding values for NBD were 1.9 ± 0.6% and 5.3 ± 2.4%, for TNB, 6.2 ± 1.0% and 8.1 ± 3.2% respectively. These results indicate the presence of considerable VD . Including dominance in the model generally reduced VA and VPe estimates, and had only a very small effect on inbreeding depression estimates. Including inbreeding covariates did not affect estimates of any variance component. A 10% increase in doe inbreeding significantly increased NBD (bF d  = 0.18 ± 0.07), while a 10% increase in litter inbreeding significantly reduced NBA (bF l  = -0.41 ± 0.11) and TNB (bF l  = -0.34 ± 0.10). These findings argue for including dominance effects in models of litter size traits in populations that exhibit significant dominance relationships. © 2012 Blackwell Verlag GmbH.

  3. Inbreeding and selection shape genomic diversity in captive populations: Implications for the conservation of endangered species.

    Science.gov (United States)

    Willoughby, Janna R; Ivy, Jamie A; Lacy, Robert C; Doyle, Jacqueline M; DeWoody, J Andrew

    2017-01-01

    Captive breeding programs are often initiated to prevent species extinction until reintroduction into the wild can occur. However, the evolution of captive populations via inbreeding, drift, and selection can impair fitness, compromising reintroduction programs. To better understand the evolutionary response of species bred in captivity, we used nearly 5500 single nucleotide polymorphisms (SNPs) in populations of white-footed mice (Peromyscus leucopus) to measure the impact of breeding regimes on genomic diversity. We bred mice in captivity for 20 generations using two replicates of three protocols: random mating (RAN), selection for docile behaviors (DOC), and minimizing mean kinship (MK). The MK protocol most effectively retained genomic diversity and reduced the effects of selection. Additionally, genomic diversity was significantly related to fitness, as assessed with pedigrees and SNPs supported with genomic sequence data. Because captive-born individuals are often less fit in wild settings compared to wild-born individuals, captive-estimated fitness correlations likely underestimate the effects in wild populations. Therefore, minimizing inbreeding and selection in captive populations is critical to increasing the probability of releasing fit individuals into the wild.

  4. Inbreeding levels in Northeast Brazil: strategies for the prospecting of new genetic disorders

    Directory of Open Access Journals (Sweden)

    Silvana Santos

    2010-01-01

    Full Text Available A new autosomal recessive genetic condition, the SPOAN syndrome (an acronym for spastic paraplegia, optic atrophy and neuropathy syndrome, was recently discovered in an isolated region of the State of Rio Grande do Norte in Northeast Brazil, in a population that was identified by the IBGE (Brazilian Institute of Geography and Statistics as belonging to the Brazilian communities with the highest rates of "deficiencies" (Neri, 2003, a term used to describe diseases, malformations, and handicaps in general. This prompted us to conduct a study of consanguinity levels in five of its municipal districts by directly interviewing their inhabitants. Information on 7,639 couples (corresponding to about 40% of the whole population of the studied districts was obtained. The research disclosed the existence of very high frequencies of consanguineous marriages, which varied from about 9% to 32%, suggesting the presence of a direct association between genetic diseases such as the SPOAN syndrome, genetic drift and inbreeding levels. This fact calls for the introduction of educational programs for the local populations, as well as for further studies aiming to identify and characterize other genetic conditions. Epidemiological strategies developed to collect inbreeding data, with the collaboration of health systems available in the region, might be very successful in the prospecting of genetic disorders.

  5. Glass Effect in Inbreeding-Avoidance Systems: Minimum Viable Population for Outbreeders

    Science.gov (United States)

    Tainaka, Kei-ichi; Itoh, Yoshiaki

    1996-10-01

    Many animals, birds and plants have evolved mechanisms to avoid inbreeding between close relatives.Such mating systems may have developed several methods for restricting mate choice.If fragmentation of habitats becomes serious, these methods may lead to a lack of acceptable mates. We call this “glass effect”which is a generalization of the so-called Allee effect.We present two inbreeding-avoidance (outbreeding) models.Both models show that outbreeders have a high risk infragmented environments.We thus obtain the minimum viable population (MVP). It is found that the value of MVP amounts to the range from several hundred to several thousand individuals.While this value is much larger than thoseobtained by the previous demographic theories,it is consistent with recent empirical estimations.Moreover, we find that the glass effect is caused bydynamically induced clusters of relatives.This suggests that genetic variation will be decreased by the outbreeding in a highly fragmented environment.

  6. Genetic Diversity of Three Aristichthys nobilis Populations and One Inbreeding Stock

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Genetic diversity of three Aristichthys nobilis populations and one inbreeding stock was studied using random amplified polymorphic DNA(RAPD)method. Materials of natural populations were collected from two counties of Guangxi Province, Hengxian (NH) and Shanglin (NS) and one city of Hubei Province, Wuhan city.(NW). Shanglin and Hengxian's river system respectively belongs to Qianjiang and Yujiang River, two tributaries confluencing to Xunjiang River, main tributary of Xijiang River, which is the biggest tributary of the Zhujiang River system, and Wuhan's water system belongs to the Yangtse River system. The inbreeding stock (RS) was the more than 10 generation descendant by brother-sister mating system whose parents were collected from Shanglin. The results showed that the genetic variety of individuals of RS was very low (0.105 4), whereas that of natural populations was relatively high,which from high to low was 0.158 1 (NW), 0.132 0 (NH) and 0.110 5 (NS). As an index for genetic distance pair-wise populations, the genetic variety between populations was studied, which characterized the genetic distance between populations. The genetic distance of NW and NH, NW and NS, NW and RS were respectively high, whereas that of NH and NS, NS and RS, NH and RS was low. Chi-test(χ2) and the analysis of the genetic variety pair-wise populations was taken as efficient approach for studying population difference.

  7. Inbreeding levels in Northeast Brazil: Strategies for the prospecting of new genetic disorders

    Science.gov (United States)

    2010-01-01

    A new autosomal recessive genetic condition, the SPOAN syndrome (an acronym for spastic paraplegia, optic atrophy and neuropathy syndrome), was recently discovered in an isolated region of the State of Rio Grande do Norte in Northeast Brazil, in a population that was identified by the IBGE (Brazilian Institute of Geography and Statistics) as belonging to the Brazilian communities with the highest rates of “deficiencies” (Neri, 2003), a term used to describe diseases, malformations, and handicaps in general. This prompted us to conduct a study of consanguinity levels in five of its municipal districts by directly interviewing their inhabitants. Information on 7,639 couples (corresponding to about 40% of the whole population of the studied districts) was obtained. The research disclosed the existence of very high frequencies of consanguineous marriages, which varied from about 9% to 32%, suggesting the presence of a direct association between genetic diseases such as the SPOAN syndrome, genetic drift and inbreeding levels. This fact calls for the introduction of educational programs for the local populations, as well as for further studies aiming to identify and characterize other genetic conditions. Epidemiological strategies developed to collect inbreeding data, with the collaboration of health systems available in the region, might be very successful in the prospecting of genetic disorders. PMID:21637472

  8. Inbreeding and selection on sex ratio in the bark beetle Xylosandrus germanus

    Directory of Open Access Journals (Sweden)

    Keller Laurent

    2011-12-01

    Full Text Available Abstract Background Local Mate Competition (LMC theory predicts a female should produce a more female-biased sex ratio if her sons compete with each other for mates. Because it provides quantitative predictions that can be experimentally tested, LMC is a textbook example of the predictive power of evolutionary theory. A limitation of many earlier studies in the field is that the population structure and mating system of the studied species are often estimated only indirectly. Here we use microsatellites to characterize the levels of inbreeding of the bark beetle Xylosandrus germanus, a species where the level of LMC is expected to be high. Results For three populations studied, genetic variation for our genetic markers was very low, indicative of an extremely high level of inbreeding (FIS = 0.88. There was also strong linkage disequilibrium between microsatellite loci and a very strong genetic differentiation between populations. The data suggest that matings among non-siblings are very rare (3%, although sex ratios from X. germanus in both the field and the laboratory have suggested more matings between non-sibs, and so less intense LMC. Conclusions Our results confirm that caution is needed when inferring mating systems from sex ratio data, especially when a lack of biological detail means the use of overly simple forms of the model of interest.

  9. Biomarkers of oral exposure to 3-nitro-1,2,4-triazol-5-one (NTO) and 2,4-dinitroanisole (DNAN) in blood and urine of rhesus macaques (Macaca mulatta).

    Science.gov (United States)

    Hoyt, Nathan; Brunell, Marla; Kroeck, Karl; Hable, Mike; Crouse, Lee; O'Neill, Art; Bannon, Desmond I

    2013-11-01

    The U.S. Department of Defense is using the chemicals 2,4-dinitroanisole (DNAN) and 3-nitro-1, 2,4-triazol-5-one (NTO) in new munitions development. In a screen for biomarkers of exposure, these compounds were measured in urine and blood of male rhesus monkeys after oral doses. NTO peaked at 4 h, with urinary concentrations at least 100-fold higher than that of blood or serum while 4-dinitrophenol (DNP), a metabolite of DNAN, appeared in blood at concentrations 10- to 20-fold higher than the parent compound. For human exposure monitoring, urine is optimal for NTO while the metabolite DNP in blood is best for DNAN.

  10. Continuous human metastin 45-54 infusion desensitizes G protein-coupled receptor 54-induced gonadotropin-releasing hormone release monitored indirectly in the juvenile male Rhesus monkey (Macaca mulatta): a finding with therapeutic implications.

    Science.gov (United States)

    Seminara, Stephanie B; Dipietro, Meloni J; Ramaswamy, Suresh; Crowley, William F; Plant, Tony M

    2006-05-01

    The effect of continuous administration of the C-terminal fragment of metastin, the ligand for the G protein-coupled receptor, GPR54, on GnRH-induced LH secretion was examined in three agonadal, juvenile male monkeys whose responsiveness to GnRH was heightened by pretreatment with a chronic pulsatile iv infusion of synthetic GnRH. After bolus injection of 10 microg human (hu) metastin 45-54 (equivalent to kisspeptin 112-121), the GPR54 agonist was infused continuously at a dose of 100 microg/h and elicited a brisk LH response for approximately 3 h. This rise was then followed by a precipitous drop in LH despite continuous exposure of GPR54 to metastin 45-54. On d 4, during the final 3 h of the infusion, single boluses of hu metastin 45-54 (10 microg), N-methyl-DL-aspartic acid (NMDA) (10 mg/kg) and GnRH (0.3 microg) were administered to interrogate each element of the metastin-GPR54-GnRH-GnRH receptor cascade. Although the NMDA and GnRH boluses were able to elicit LH pulses, that of hu metastin 45-54 was not, demonstrating functional integrity of GnRH neurons (NMDA) and GnRH receptors (NMDA and GnRH) but desensitization of GPR54. The desensitization of GPR54 by continuous hu metastin 45-54 administration has therapeutic implications for a variety of conditions currently being treated by GnRH and its analogs, including restoration of fertility in patients with abnormal GnRH secretion (i.e. idiopathic hypogonadotropic hypogonadism and hypothalamic amenorrhea) and selective, reversible suppression of the pituitary-gonadal axis to achieve suppression of gonadal steroids (i.e. precocious puberty, endometriosis, uterine fibroids, and prostate cancer).

  11. Expression of Leptin in Part of Digestive System of Macaca mulatta with Type 2 Diabetes Mellitus%2型糖尿病猕猴部分消化器官组织中瘦素的表达

    Institute of Scientific and Technical Information of China (English)

    万红平; 付通超; 刘文涛; 陈正礼

    2012-01-01

    为探究瘦素与猕猴2型糖尿病发生发展的关系,选用3只患2型糖尿病的成年猕猴,无菌采集胰腺、肝脏、胃和肠道组织,用免疫组织化学染色方法检测各组织中瘦素的表达,并通过光镜观察、统计学方法分析其与临床病理组织各参数之间的关系;另选3只健康成年猕猴组织进行相同操作,作为对照.瘦素在2型糖尿病猕猴部分消化器官组织与对照组组织中的表达差异极显著(P<0.01).表明瘦素的分泌与猕猴2型糖尿病的发生发展密切相关.

  12. A Cholesterol-Bilirubinate Gallstone Induced by Fasciola hepatica Infection in Macaca mulatta%猕猴自然感染肝片吸虫诱发胆管结石的形成

    Institute of Scientific and Technical Information of China (English)

    廖国阳; 卢明义; 谢晋

    2000-01-01

    在研究肝片吸虫诱发猕猴自发性胆结石形成的病理学基础上,采用红外光谱分析、原子吸收光谱分析和组织化学染色对胆结石的成分及结构进行了测定,初步探讨了本病发生的机理.在一只9岁雌性猕猴肝总胆管内发现4条肝片吸虫(Fasciola hepatica),胆囊胆汁中检出大量肝片吸虫虫卵.左侧胆管内有一颗棕黑色结石,直径为1 cm、长约2.5 cm圆柱形.肝细胞灶性坏死伴有轻度结缔组织增生,胆管腺体重度增生,上皮细胞胞质内含有中性与酸性混合型粘多糖物质,上皮间有大量杯状细胞.胆石切面呈环状,环层间含有粘多糖物质.胆石经红外光谱分析出现胆固醇-胆色素混合型胆石和黑色物质特征性吸收峰;原子吸收光谱分析钙元素含量最高.

  13. 恒河猴脑垂体远侧部细胞的电镜观察%Ultrastructural Observation of Adenohypophysis Pars Distalis of Rhesus Mon key (Macaca mulatta )

    Institute of Scientific and Technical Information of China (English)

    李玉谷; 张媛; 钟毅敏; 李楚宣; 黄韧; 程树军

    2002-01-01

    应用透射电镜观察了恒河猴脑垂体远侧部含有的6种细胞.即生长激素细胞、催乳激素细胞、促甲状腺激素细胞、促性腺激素细胞、促肾上腺皮质激素细胞和滤泡-星形细胞.生长激素细胞呈圆形或椭圆形,分泌颗粒直径200~450 nm.催乳激素细胞呈卵圆形或不规则形,胞核为不规则形,分泌颗粒直径250~800 nm.促甲状腺激素细胞呈卵圆形或不规则形,分泌颗粒直径100~250 nm.促肾上腺皮质激素细胞呈圆形或卵圆形,分泌颗粒直径250~450 nm.促性腺激素细胞呈圆形,其椭圆形的分泌颗粒长径为250~800 nm.滤泡-星形细胞呈卵圆形或不规则形,有突起伸入相邻细胞之间,无分泌颗粒.

  14. A Reevaluation of the Question: Is the Pubertal Resurgence in Pulsatile GnRH Release in the Male Rhesus Monkey (Macaca mulatta) Associated With a Gonad-Independent Augmentation of GH Secretion?

    Science.gov (United States)

    Shahab, M; Trujillo, M Vargas; Plant, T M

    2015-10-01

    A somatic signal has been posited to trigger the pubertal resurgence in pulsatile GnRH secretion that initiates puberty in highly evolved primates. That GH might provide such a signal emerged in 2000 as a result of a study reporting that circulating nocturnal GH concentrations in castrated juvenile male monkeys increased in a 3-week period immediately preceding the pubertal resurgence of LH secretion. The present study was conducted to reexamine this intriguing relationship, again in an agonadal model. Four castrated juvenile male monkeys were implanted with indwelling jugular catheters, housed in remote sampling cages, and subjected to 24 hours of sequential blood sampling (every 30 min) every 2 weeks from 19.5 to 22 months of age. Twenty-four-hour profiles of circulating GH concentrations were analyzed using the pulse detection algorithm, PULSAR, and developmental changes in pulsatile GH release with respect to the initiation of the pubertal rise of LH secretion (week 0; observed between 22.5 and 32 mo of age) were examined for significance by a repeated-measures ANOVA. Changes in the parameters of pulsatile GH secretion, including mean 24-hour GH concentration and GH pulse frequency and pulse amplitude for 3 (n = 4) and 6 (n = 3) months before week 0 were unremarkable and nonsignificant. These findings fail to confirm those of the earlier study and lead us to conclude that the timing of the pubertal resurgence of GnRH release in the male monkey is not dictated by GH. Reasons for the discrepancy between the two studies are unclear.

  15. Expression of 10 GABA(A) receptor subunit messenger RNAs in the motor-related thalamic nuclei and basal ganglia of Macaca mulatta studied with in situ hybridization histochemistry.

    Science.gov (United States)

    Kultas-Ilinsky, K; Leontiev, V; Whiting, P J

    1998-07-01

    In situ hybridization histochemistry technique with [35S]UTP-labelled riboprobes was used to study the expression pattern of 10 GABA(A) receptor subunit messenger RNAs in the basal ganglia and motor thalamic nuclei of rhesus monkey. Human transcripts were used for the synthesis of alpha2, alpha4, beta2, beta3, gamma1 and delta subunit messenger RNA probes. Rat complementary DNAs were used for generating alpha1, alpha3, beta1 and gamma2 subunit messenger RNA probes. Nigral, pallidal and cerebellar afferent territories in the ventral tier thalamic nuclei all expressed alpha1, alpha2, alpha3, alpha4, beta1, beta2, beta3, delta and gamma2 subunit messenger RNAs but at different levels. Each intralaminar nucleus displayed its own unique expression pattern. In the thalamus, gamma1 subunit messenger RNA was detected only in the parafascicular nucleus. Comparison of the expression patterns with the known organization of GABA(A) connections in thalamic nuclei suggests that (i) the composition of the receptor associated with reticulothalamic synapses, except for those in the intralaminar nuclei, may be alpha1alpha4beta2delta, (ii) receptors of various other subunit compositions may operate in the local GABAergic circuits, and (iii) the composition of receptors at nigro- and pallidothalamic synapses may differ, with those at nigrothalamic probably containing beta1 and gamma2 subunits. In the medial and lateral parts of the globus pallidus, the subthalamic nucleus and the substantia nigra pars reticularis, the alpha1, beta2 and gamma2 messenger RNAs were co-expressed at a high level suggesting that this subunit composition was associated with all GABAergic synapses in the direct and indirect striatal output pathways. Various other subunit messenger RNAs were also expressed but at a lower level. In the substantia nigra pars compacta the most highly expressed messenger RNAs were alpha3, alpha4 and beta3; all other subunit messenger RNAs studied, except for gamma1, alpha1 and alpha2, were expressed at a moderate to high level. In the striatum, the following subunit messenger RNAs were expressed (listed in order of decreasing signal intensity): alpha4, beta3, alpha2, alpha3, beta2, delta, gamma2, alpha1. The expression patterns found in the monkey were similar to those described in comparable nuclei in the rat by Wisden et al. [J. Neurosci. (1992), 12, p. 1040]; however, the monkey nuclei displayed a much greater variety of GABA(A) receptor subunit messenger RNAs.

  16. Activation of innate immunity in healthy Macaca mulatta macaques by a single subcutaneous dose of GMP CpG 7909: safety data and interferon-inducible protein-10 kinetics for humans and macaques.

    Science.gov (United States)

    Stewart, V Ann; McGrath, Shannon; Krieg, Arthur M; Larson, Noelle S; Angov, Evelina; Smith, Christopher L; Brewer, Thomas G; Heppner, D Gray

    2008-02-01

    Following a demonstration that mouse-optimized cytosine-guanosine dinucleotide (CpG) oligodeoxynucleotides stimulated innate immune protection against intracellular pathogens, we tested the ability of CpG 7909, a primate-optimized Toll-like receptor 9 (TLR9) agonist, to stimulate rhesus macaques to produce interferon-inducible protein-10 (IP-10), a biomarker of immune activation. This study was performed prior to a similar trial with humans in order to facilitate the development of CpG 7909 as an immunomodulator for biodefense. A single subcutaneous dose of clinical-grade CpG 7909 was given to four groups of healthy adult rhesus macaques (0-mg dose [n = 5], 0.75-mg dose [n = 9], 1.5-mg dose [n = 9], and 3.0-mg dose [n = 9]). Directed physical examination findings, clinical laboratory values, and serum IP-10 concentrations were collected at scheduled intervals for 28 days. All three dose levels of CpG 7909 were safe and not associated with significant clinical or laboratory abnormality. The time to peak serum IP-10 concentration was 1.0 days at the 0.75-mg dose and 0.5 days at the 1.5- and 3.0-mg doses. A dose-dependent response was observed for the magnitude and duration of IP-10 concentrations, which remained significantly above baseline for 3 days for the 3.0-mg and 1.5-mg dose groups but above baseline for only 2 days for the 0.75-mg dose group. There were no nonresponders to CpG 7909. These rhesus macaque safety and IP-10 response data closely parallel a subsequent phase 1 human study of subcutaneously administered CpG 7909. A single dose of clinical-grade CpG 7909 induced a rapid, sustained IP-10 response, a biomarker for activation of the innate immune system. Given the similar susceptibilities of humans and rhesus macaques to infectious diseases, the rhesus macaque appears to be a suitable model to evaluate the potential of CpG 7909-mediated innate immune activation to protect humans against pathogens.

  17. Activation of Innate Immunity in Healthy Macaca mulatta Macaques by a Single Subcutaneous Dose of GMP CpG 7909: Safety Data and Interferon-Inducible Protein-10 Kinetics for Humans and Macaques▿

    OpenAIRE

    Stewart, V. Ann; McGrath, Shannon; Krieg, Arthur M.; Larson, Noelle S.; Angov, Evelina; Smith, Christopher L.; Brewer, Thomas G; Heppner, D. Gray

    2007-01-01

    Following a demonstration that mouse-optimized cytosine-guanosine dinucleotide (CpG) oligodeoxynucleotides stimulated innate immune protection against intracellular pathogens, we tested the ability of CpG 7909, a primate-optimized Toll-like receptor 9 (TLR9) agonist, to stimulate rhesus macaques to produce interferon-inducible protein-10 (IP-10), a biomarker of immune activation. This study was performed prior to a similar trial with humans in order to facilitate the development of CpG 7909 a...

  18. Phylogeography of Barbary macaques (Macaca sylvanus) and the origin of the Gibraltar colony.

    Science.gov (United States)

    Modolo, Lara; Salzburger, Walter; Martin, Robert D

    2005-05-17

    The Barbary macaque (Macaca sylvanus) is the earliest offshoot of the genus Macaca and the only extant African representative, all other species being Asiatic. Once distributed throughout North Africa, M. sylvanus is now restricted to isolated forest fragments in Algeria and Morocco. The species is threatened; the maximum total wild population size is estimated at 10,000 individuals. Relationships among surviving wild subpopulations in Algeria (96 samples) and Morocco (116 samples) were examined by using 468-bp sequences from hypervariable region I of the mitochondrial DNA control region. Twenty-four different haplotypes were identified, differing by 1-26 mutational steps (0.2-5.6%) and 1 insertion. With one exception (attributable to secondary introduction in coastal Morocco), Algerian and Moroccan haplotypes are clearly distinct. However, whereas Moroccan subpopulations show little divergence in hypervariable region I sequences and little correspondence with geographical distribution, there is a deep division between two main subpopulations in Algeria and one marked secondary division, with haplotypes generally matching geographical distribution. Accepting an origin of the genus Macaca of 5.5 million years ago, the Moroccan population and the two main Algerian subpopulations diverged approximately 1.6 million years ago. Distinction between Moroccan and Algerian haplotypes permitted analysis of the origin of the Gibraltar colony of Barbary macaques (68 samples; 30% of the population). It is generally held that the present Gibraltar population descended from a dozen individuals imported during World War II. However, the Gibraltar sample was found to include Algerian and Moroccan haplotypes separated by at least 16 mutational steps, revealing a dual origin of the founding females.

  19. Differences in the morphology of the maxillary sinus and roots of teeth between Macaca fuscata and Macaca fuscata yakui determined using cone beam computed tomography.

    Science.gov (United States)

    Zaizen, Tomonori; Sato, Iwao; Miwa, Yoko; Sunohara, Masataka; Yosue, Takashi; Mine, Kazuharu; Koseki, Hirohisa; Shimada, Kazuyuki

    2013-01-01

    The Japanese macaque is an endemic species consisting of two subspecies: Macaca fuscata fuscata (MFF) and Macaca fuscata yakui (MFY). The MFY is indigenous to Yakushima Island and represents a subspecies of MFF that lives from Honshu to Shikoku and Kyushu, Japan. However, the differences in the skulls of the MFY and MFF are unknown, despite these subspecies having different skull sizes. The maxillary sinus (MS) indicates that the features of the frontal view reflect the transversal growth of the maxilla of the skull. In this study, we show the MS structures of the MFF (n = 9, 18 sides) and MFY (n = 10, 20 sides) using a cone-beam computed tomography instrument. Base on three-dimensional (3D) reconstructed images the MS and nasal cavity were found to present almost to no significant differences between MFF and MFY. However, we designated three classifications of the sinus floor based on the 3D MS images of these Japanese macaques: a round-like shape (type a, MFF = 66.7% (12/18), MFY = 45% (9/20)), a flat-like shape (type b, MFF = 22.2% (4/18), MFY = 35% (7/20)), and an irregular shape (type c, MFF = 11.1% (2/18), MFY = 20.0% (4/20)). The sinus floor shapes of the MFF were mostly type a, while those of the MFY were mostly type b. The prevalence of a root contacting the cortical bone is higher in the canine (26.7%, (8/30)) and second premolar (20%, (6/30) of the MFY at the nasal cavity, moreover, this value is higher in the third molar (42.9%, (9/21)) of the MS in the MFY. These results suggest that the features of the floor of the MS are related to the differences in maxillary root apices teeth between MMF and MMF.

  20. 利用微卫星标记分析4个食蟹猴群体的遗传多样性%Analysis of genetic diversity of four Macaca fascicularis populations with microsatellite markers

    Institute of Scientific and Technical Information of China (English)

    皮道元; 谢莉萍; 卢晟盛; 卢克焕

    2011-01-01

    利用7个恒河猴源微卫星标记和4个人源微卫星标记共11个标记,分析了来源于束埔寨(Pop1)、老挝(Pop2)、越南1(Pop3)和越南2(Pop4)共4个群体食蟹猴的遗传多样性.研究结果显示,所选择的11个微卫星位点表现出很高的多态性,群体内的多态性较低,存在较严重的近亲交配.Hardy-Weinberg平衡检测说明4个群体在这11个位点上均处于不平衡状态,可能存在较严重的人工选择繁育.亚群体内的固定指数平均为0.526 2,说明群体内存在近亲交配;亚种群间的固定指数均值为0.016 6,说明各群体间的遗传分化很小;各位点上的基因流均值为14.814 2,说明其交流很活跃,可有效地防止因遗传漂移而产生的遗传分化.从基于Nei氏标准遗传距离的UPGMS聚类图看出,先是Pop3和Pop4聚为一类,再和Pop1聚在一起,最后和Pop2聚在一起,其结果和其地理分布所表现的遗传差异一致.%The genetic diversity of Macaca fascicularis from four populations was analyzed by using eleven microsatellite markers including seven rhesus-derived markers and four human-derived makers. The four populations came from Cambodia (Pop 1) ,Laos (Pop 2) ,Vietnam 1 (Pop 3) and Vietnam 2 (Pop 4) ,respectively. It is illuminated that the high polymorphism was showed in 11 microsatellite locus. There was low polymorphism and seriously inbreeding within the groups. The unbalance on 11 locus from four groups was proved according to Hardy-Weinberg test. There may be more serious artificial selection inbreeding. When Fis is 0. 526 2,it showed that inbreeding was existed within groups. The Fst is 0.016 6,meaning that the genetic differentiation between groups is very small. The gene flow on every locus is 14.814 2, showing that the exchange of them is active. It may be effective by preventing genetic from differentiation because of genetic drift. According to dendrogram of UPGMS based on Nei's Unbiased Measures of genetic distance,Pop3

  1. Construction and validation of a systematic ethogram of Macaca fascicularis in a free enclosure.

    Science.gov (United States)

    Xu, Fan; Xie, Liang; Li, Xin; Li, Qi; Wang, Tao; Ji, Yongjia; Kong, Fei; Zhan, Qunlin; Cheng, Ke; Fang, Liang; Xie, Peng

    2012-01-01

    Behavioral studies in non-human primates have become ideal models for further investigations into advanced cognitive function in humans. To date, there is no systematic ethogram of the cynomolgus monkey (Macaca fascicularis) in a free enclosure. In a field observation of 6012 subjects, 107 distinct behaviors of M. fascicularis were preliminarily described. 83 of these behaviors were then independently validated through a randomized cohort and classified into 12 behavioral categories. 53 of these behaviors were then selected to accurately reflect the daily mundane activity of the species in a free enclosure. These findings systematically document the behavior of M. fascicularis in a free enclosure for use in further investigations.

  2. Construction and validation of a systematic ethogram of Macaca fascicularis in a free enclosure.

    Directory of Open Access Journals (Sweden)

    Fan Xu

    Full Text Available Behavioral studies in non-human primates have become ideal models for further investigations into advanced cognitive function in humans. To date, there is no systematic ethogram of the cynomolgus monkey (Macaca fascicularis in a free enclosure. In a field observation of 6012 subjects, 107 distinct behaviors of M. fascicularis were preliminarily described. 83 of these behaviors were then independently validated through a randomized cohort and classified into 12 behavioral categories. 53 of these behaviors were then selected to accurately reflect the daily mundane activity of the species in a free enclosure. These findings systematically document the behavior of M. fascicularis in a free enclosure for use in further investigations.

  3. AcEST: DK959915 [AcEST

    Lifescience Database Archive (English)

    Full Text Available haracterized protein AF_1225 OS=Archaeo... 33 1.3 sp|Q9MYL0|LEPR_MACMU Leptin receptor OS=Macaca mulatta GN=...AKMLGIQNE----LQKQQIEELQKKLERAKTELQKKKSDLDELEEK 176 >sp|Q9MYL0|LEPR_MACMU Leptin receptor OS=Macaca mulatta G

  4. Dicty_cDB: CHJ155 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available _MCQ_24294 Katze_MMJJ Macaca mulatta cDNA clone IBIUW:27442 5' similar to Bases 2...CQ_24489 Katze_MMJJ Macaca mulatta cDNA clone IBIUW:26377 5' similar to Bases 25 to 927 highly similar to hu

  5. NCBI nr-aa BLAST: CBRC-FCAT-01-0217 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-FCAT-01-0217 ref|NP_001027996.1| opioid receptor, mu 1 [Macaca mulatta] sp|Q9M...YW9|OPRM_MACMU Mu-type opioid receptor (MOR-1) gb|AAF97249.2|AF286024_1 mu opioid receptor [Macaca mulatta] NP_001027996.1 5e-35 87% ...

  6. NCBI nr-aa BLAST: CBRC-RMAC-04-0055 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-RMAC-04-0055 ref|NP_001027996.1| opioid receptor, mu 1 [Macaca mulatta] sp|Q9M...YW9|OPRM_MACMU Mu-type opioid receptor (MOR-1) gb|AAF97249.2|AF286024_1 mu opioid receptor [Macaca mulatta] NP_001027996.1 0.0 99% ...

  7. NCBI nr-aa BLAST: CBRC-RMAC-14-0017 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-RMAC-14-0017 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 0.0 99% ...

  8. NCBI nr-aa BLAST: CBRC-HSAP-15-0019 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-HSAP-15-0019 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 0.0 95% ...

  9. NCBI nr-aa BLAST: CBRC-HSAP-23-0062 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-HSAP-23-0062 ref|NP_001028074.1| bombesin-like receptor 3 [Macaca mulatta] sp|Q6H2Y3|BRS3_MACMU Bombes...in receptor subtype-3 (BRS-3) gb|AAR07972.1| bombesin-like receptor subtype 3 [Macaca mulatta] NP_001028074.1 0.0 96% ...

  10. NCBI nr-aa BLAST: CBRC-EEUR-01-1457 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-EEUR-01-1457 ref|NP_001028074.1| bombesin-like receptor 3 [Macaca mulatta] sp|Q6H2Y3|BRS3_MACMU Bombes...in receptor subtype-3 (BRS-3) gb|AAR07972.1| bombesin-like receptor subtype 3 [Macaca mulatta] NP_001028074.1 1e-107 55% ...

  11. NCBI nr-aa BLAST: CBRC-OCUN-01-1277 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-OCUN-01-1277 ref|NP_001028074.1| bombesin-like receptor 3 [Macaca mulatta] sp|Q6H2Y3|BRS3_MACMU Bombes...in receptor subtype-3 (BRS-3) gb|AAR07972.1| bombesin-like receptor subtype 3 [Macaca mulatta] NP_001028074.1 1e-70 95% ...

  12. NCBI nr-aa BLAST: CBRC-TBEL-01-1031 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-TBEL-01-1031 ref|NP_001028074.1| bombesin-like receptor 3 [Macaca mulatta] sp|Q6H2Y3|BRS3_MACMU Bombes...in receptor subtype-3 (BRS-3) gb|AAR07972.1| bombesin-like receptor subtype 3 [Macaca mulatta] NP_001028074.1 0.0 89% ...

  13. NCBI nr-aa BLAST: CBRC-XTRO-01-3530 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-XTRO-01-3530 ref|NP_001028074.1| bombesin-like receptor 3 [Macaca mulatta] sp|Q6H2Y3|BRS3_MACMU Bombes...in receptor subtype-3 (BRS-3) gb|AAR07972.1| bombesin-like receptor subtype 3 [Macaca mulatta] NP_001028074.1 1e-142 64% ...

  14. NCBI nr-aa BLAST: CBRC-GGAL-04-0014 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-GGAL-04-0014 ref|NP_001028074.1| bombesin-like receptor 3 [Macaca mulatta] sp|Q6H2Y3|BRS3_MACMU Bombes...in receptor subtype-3 (BRS-3) gb|AAR07972.1| bombesin-like receptor subtype 3 [Macaca mulatta] NP_001028074.1 1e-156 68% ...

  15. NCBI nr-aa BLAST: CBRC-FCAT-01-0505 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-FCAT-01-0505 ref|NP_001028074.1| bombesin-like receptor 3 [Macaca mulatta] sp|Q6H2Y3|BRS3_MACMU Bombes...in receptor subtype-3 (BRS-3) gb|AAR07972.1| bombesin-like receptor subtype 3 [Macaca mulatta] NP_001028074.1 1e-96 69% ...

  16. NCBI nr-aa BLAST: CBRC-RNOR-21-0248 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-RNOR-21-0248 ref|NP_001028074.1| bombesin-like receptor 3 [Macaca mulatta] sp|Q6H2Y3|BRS3_MACMU Bombes...in receptor subtype-3 (BRS-3) gb|AAR07972.1| bombesin-like receptor subtype 3 [Macaca mulatta] NP_001028074.1 0.0 86% ...

  17. NCBI nr-aa BLAST: CBRC-CFAM-39-0035 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-CFAM-39-0035 ref|NP_001028074.1| bombesin-like receptor 3 [Macaca mulatta] sp|Q6H2Y3|BRS3_MACMU Bombes...in receptor subtype-3 (BRS-3) gb|AAR07972.1| bombesin-like receptor subtype 3 [Macaca mulatta] NP_001028074.1 0.0 88% ...

  18. NCBI nr-aa BLAST: CBRC-MMUR-01-0743 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-MMUR-01-0743 ref|NP_001038197.1| oxytocin receptor [Macaca mulatta] sp|P56494|...OXYR_MACMU RecName: Full=Oxytocin receptor; Short=OT-R gb|AAC52031.1| oxytocin receptor [Macaca mulatta] NP_001038197.1 2e-67 92% ...

  19. NCBI nr-aa BLAST: CBRC-MMUS-06-0152 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-MMUS-06-0152 ref|NP_001038197.1| oxytocin receptor [Macaca mulatta] sp|P56494|...OXYR_MACMU Oxytocin receptor (OT-R) gb|AAC52031.1| oxytocin receptor [Macaca mulatta] NP_001038197.1 0.0 92% ...

  20. NCBI nr-aa BLAST: CBRC-PHAM-01-1841 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-PHAM-01-1841 ref|NP_001038197.1| oxytocin receptor [Macaca mulatta] sp|P56494|...OXYR_MACMU RecName: Full=Oxytocin receptor; Short=OT-R gb|AAC52031.1| oxytocin receptor [Macaca mulatta] NP_001038197.1 0.0 99% ...

  1. NCBI nr-aa BLAST: CBRC-CFAM-20-0008 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-CFAM-20-0008 ref|NP_001038197.1| oxytocin receptor [Macaca mulatta] sp|P56494|...OXYR_MACMU Oxytocin receptor (OT-R) gb|AAC52031.1| oxytocin receptor [Macaca mulatta] NP_001038197.1 0.0 92% ...

  2. NCBI nr-aa BLAST: CBRC-FCAT-01-0943 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-FCAT-01-0943 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 1e-53 92% ...

  3. NCBI nr-aa BLAST: CBRC-DRER-17-0002 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-DRER-17-0002 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 1e-166 60% ...

  4. NCBI nr-aa BLAST: CBRC-DNOV-01-2458 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-DNOV-01-2458 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 0.0 90% ...

  5. NCBI nr-aa BLAST: CBRC-HSAP-11-0323 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-HSAP-11-0323 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 0.0 99% ...

  6. NCBI nr-aa BLAST: CBRC-MMUS-02-0383 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-MMUS-02-0383 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 0.0 87% ...

  7. NCBI nr-aa BLAST: CBRC-DNOV-01-1759 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-DNOV-01-1759 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 5e-68 92% ...

  8. NCBI nr-aa BLAST: CBRC-ACAR-01-0122 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-ACAR-01-0122 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 1e-150 59% ...

  9. NCBI nr-aa BLAST: CBRC-DRER-12-0069 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-DRER-12-0069 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 1e-131 55% ...

  10. NCBI nr-aa BLAST: CBRC-RNOR-01-0784 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-RNOR-01-0784 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 0.0 98% ...

  11. NCBI nr-aa BLAST: CBRC-BTAU-01-1989 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-BTAU-01-1989 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 0.0 91% ...

  12. NCBI nr-aa BLAST: CBRC-CJAC-01-1410 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-CJAC-01-1410 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 0.0 99% ...

  13. NCBI nr-aa BLAST: CBRC-EEUR-01-0450 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-EEUR-01-0450 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 1e-117 86% ...

  14. NCBI nr-aa BLAST: CBRC-OCUN-01-1441 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-OCUN-01-1441 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 0.0 98% ...

  15. NCBI nr-aa BLAST: CBRC-SARA-01-1348 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-SARA-01-1348 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 0.0 88% ...

  16. NCBI nr-aa BLAST: CBRC-CFAM-18-0237 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-CFAM-18-0237 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 0.0 97% ...

  17. NCBI nr-aa BLAST: CBRC-CJAC-01-0745 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-CJAC-01-0745 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 0.0 93% ...

  18. NCBI nr-aa BLAST: CBRC-XTRO-01-2958 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-XTRO-01-2958 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 1e-121 57% ...

  19. NCBI nr-aa BLAST: CBRC-OGAR-01-1059 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-OGAR-01-1059 ref|NP_001028103.1| cholinergic receptor, muscarinic 5 [Macaca mu...latta] sp|P56490|ACM5_MACMU Muscarinic acetylcholine receptor M5 gb|AAB95159.1| muscarinic receptor [Macaca mulatta] NP_001028103.1 0.0 90% ...

  20. NCBI nr-aa BLAST: CBRC-TBEL-01-1343 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-TBEL-01-1343 ref|NP_001028117.1| muscarinic receptor [Macaca mulatta] sp|P56489|ACM1_MACMU Muscar...inic acetylcholine receptor M1 gb|AAB95157.1| muscarinic receptor [Macaca mulatta] NP_001028117.1 0.0 98% ...