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Sample records for m5 pep m6

  1. 新BMW M5和新BMW M6车型即将进入中国市场

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    2006年夏天即将在中国上市的新BMW M车型包括新BMW M5和新BMW M6,他们拥有强悍的动力单元,把超级跑车的外观和Grand Touring赛车的性能完美地结合在了一起。

  2. Infections caused by Moraxella, Moraxella urethralis, Moraxella-like groups M-5 and M-6, and Kingella kingae in the United States, 1953-1980.

    Science.gov (United States)

    Graham, D R; Band, J D; Thornsberry, C; Hollis, D G; Weaver, R E

    1990-01-01

    From 1953 to 1980 the Centers for Disease Control received 933 isolates of bacteria belonging to species of the genus Moraxella, Moraxella-like Moraxella urethralis, now renamed Oligella urethralis, unnamed groups M-5 and M-6, and Kingella kingae. Ordinarily sterile sites were the source of 233 isolates. Moraxella nonliquefaciens, the most common isolate (356 strains), was recovered from upper respiratory or ocular sites in 208 (58%) of the cases. Moraxella osloensis was next most common (199 strains) but was the most frequent blood isolate (44 cases). K. kingae appeared especially invasive, with 58 of 78 isolates from blood, bone, or joint. Of the K. kingae strains, 75% were recovered from children under 6 years, compared with 23% of the other strains from that age group (P less than .01). Of the 74 isolates of group M-5, 53 were from wounds caused by dog bites; no other organism in this series was recovered from such wounds. Sixteen of the 28 M. urethralis isolates were from urine. Cases occurred as single infections, with no evidence of clusters. Of patients with infection of ordinarily sterile sites, 9.3% died; only bacteremia, meningitis, and empyema caused fatalities. Most referring laboratories (98%) had not identified the organisms to species, and only 30% had identified them to correct genus. Susceptibility testing by broth dilution revealed low MICs of penicillin (mean, 0.3; 64% less than 1 micrograms/mL). Moraxella, M. urethralis, M-5, M-6, and Kingella are important but frequently misidentified pathogens for humans; penicillin appears to be the treatment of choice.

  3. Olivetti M6 640

    CERN Multimedia

    1993-01-01

    The M6-640 is the highest performance personal computer workstation in the Suprema range with multimedia, document imaging and communications capabilities. It has a 90MHz Pentium processor with 256Kb of secondary cache. It can accommodate up to 128Mb RAM and supports hard disks of up to 1Gb through an IDE interface.

  4. The Danish PEP Registry

    DEFF Research Database (Denmark)

    Lunding, Suzanne; Katzenstein, Terese L; Kronborg, Gitte

    2016-01-01

    a proper risk assessment. This nationwide study describes 14 years of experience with the use of PEP following blood exposure in Denmark. METHODS: A descriptive study of all PEP cases following non-sexual exposure to HIV in Denmark from 1999-2012. RESULTS: A total of 411 cases of PEP were described...... to adverse effects. CONCLUSIONS: PEP in Denmark is generally prescribed according to the guidelines and the annual number of cases has declined since 2005. Adverse effects were common regardless of PEP regimens used and new drug regimens should be considered....

  5. Luminosity monitor at PEP

    Energy Technology Data Exchange (ETDEWEB)

    Fox, J.D.; Franklin, M.E.B.

    1981-02-01

    The luminosity monitor system utilized by the MKII Detector and by the PEP operators is described. This system processes information from 56 photomultipliers and calculates independent luminosities for each of the 3 colliding bunches in PEP. Design considerations, measurement techniques, and sources of error in the luminosity measurement are discussed.

  6. Background sources at PEP

    Energy Technology Data Exchange (ETDEWEB)

    Lynch, H.; Schwitters, R.F.; Toner, W.T.

    1988-01-01

    Important sources of background for PEP experiments are studied. Background particles originate from high-energy electrons and positrons which have been lost from stable orbits, ..gamma..-rays emitted by the primary beams through bremsstrahlung in the residual gas, and synchrotron radiation x-rays. The effect of these processes on the beam lifetime are calculated and estimates of background rates at the interaction region are given. Recommendations for the PEP design, aimed at minimizing background are presented. 7 figs., 4 tabs.

  7. GO, PEP, and POP!

    Science.gov (United States)

    Baeckler, Virginia

    Here are 250 tested ideas for lively libraries, from GO (Getting Outside) to PEP (Programs, Exhibits, Projects) and POP (Positive Operating Procedures), collected by the Mercer County (New Jersey) Library at Trenton. GO ideas include public relations and outreach ideas ranging from ads at the drive-in movie to attending high school sports events…

  8. Post-Exposure Prophylaxis (PEP)

    Science.gov (United States)

    ... Pre-Exposure Prophylaxis (PrEP) Post-Exposure Prophylaxis (PEP) HIV Treatment HIV Treatment: The Basics Just Diagnosed: Next Steps After Testing ... HIV HIV and Mental Health How to Find HIV Treatment Services HIV Prevention Post-Exposure Prophylaxis (PEP) (Last ...

  9. PEP Laser Surveying System

    Energy Technology Data Exchange (ETDEWEB)

    Lauritzen, T.; Sah, R.C.

    1979-03-01

    A Laser Surveying System has been developed to survey the beam elements of the PEP storage ring. This system provides automatic data acquisition and analysis in order to increase survey speed and to minimize operator error. Two special instruments, the Automatic Readout Micrometer and the Small Automatic Micrometer, have been built for measuring the locations of fiducial points on beam elements with respect to the light beam from a laser. These instruments automatically encode offset distances and read them into the memory of an on-line computer. Distances along the beam line are automatically encoded with a third instrument, the Automatic Readout Tape Unit. When measurements of several beam elements have been taken, the on-line computer analyzes the measured data, compared them with desired parameters, and calculates the required adjustments to beam element support stands.

  10. PEP Conceptual Design Report

    Energy Technology Data Exchange (ETDEWEB)

    1976-02-01

    The accelerator system design, the physical plant, the experimental areas, cost estimates, and schedules for PEP are discussed. The main component of the proposed facility is a storage ring in which beams of positrons and electrons circulate in opposite directions in a vacuum chamber embedded in a magnetic guide field having six bending arcs and six long straight sections. The electrons and positrons to be stored in it are produced in the SLAC linac and are introduced into the storage ring via two beam transport paths emanating from the end of the two-mile accelerator. Beams of energies up to 18 GeV can be stored, and, at a future date, components could be added to permit energies as high as 22 GeV. Provisions are also made in the design of the ring housing so that a synchrotron-radiation research facility could be added in the future. The energy lost from the beams by synchrotron radiation is restored by a high-power radio frequency accelerating system which employs klystrons to drive the accelerating structures at a frequency of 353 MHz. The system is capable of delivering five megawatts of power to the beams. Low pressures will be sustained by means of long, narrow sputter-ion pumps located in the vacuum chamber in the bending magnets directly alongside the beams. The proposed storage ring is designed to generate a luminosity (reaction rate per unit reaction cross section) of more than 10/sup 31/ cm/sup -2/sec/sup -1/ per interaction region at beam energies between 5 GeV and 18 GeV and a maximum luminosity of 10/sup 32/cm/sup -2/sec/sup -1/ per interaction region at a beam energy of 15 GeV.

  11. PEP-II Operations Report

    Energy Technology Data Exchange (ETDEWEB)

    Zisman, Michael S.

    2000-11-01

    PEP-II is a two-ring asymmetric B factory operating at the Upsilon(4S) resonance. It was constructed by a SLAC-LBNL-LLNL collaboration. The collider comprises two rings, a High-Energy Ring (HER) storing 9 GeV electrons, and a Low-Energy Ring (LER) storing 3.1 GeV positrons. Commissioning of the HER began in mid-1997 and commissioning of the LER began in mid-1998. First evidence for collisions was obtained on July 23, 1998. The BaBar detector was installed in early 1999, and commissioning with the detector commenced in May 1999. By September 1999, PEP-II had reached a peak luminosity of 1.35 x 10{sup 33} cm{sup {minus}2} s{sup {minus}1}. In the present run, which began in October 1999, the peak luminosity has reached 3.1 x 10{sup 33} cm{sup {minus}2} s{sup {minus}1} and the integrated luminosity delivered is 25 fb{sup {minus}1}. At present, PEP-II is the world's highest luminosity collider. In this paper we describe the startup experience and summarize the operational experience during fiscal year 2000 (from October 1999 through September 2000). Plan s for luminosity upgrades are briefly described.

  12. Power Extension Package (PEP) system definition extension, orbital service module systems analysis study. Volume 2: PEP

    Science.gov (United States)

    1979-01-01

    User power, duration, and orbit requirements, which were the prime factors influencing power extension package (PEP) design, are discussed. A representative configuration of the PEP concept is presented and the major elements of the system are described as well as the PEP-to-Orbiter and remote manipulator interface provisions.

  13. PEP surveying procedures and equipment

    Energy Technology Data Exchange (ETDEWEB)

    Linker, F.

    1982-06-01

    The PEP Survey and Alignment System, which employs both laser-based and optical survey methods, is described. The laser is operated in conjunction with the Tektronix 4051 computer and surveying instruments such as ARM and SAM, system which is designed to automate data input, reduction, and production of alignment instructions. The laser system is used when surveying ring quadrupoles, main bend magnets, sextupoles, and is optional when surveying RF cavities and insertion quadrupoles. Optical methods usually require that data be manually entered into the computer for alignment, but in some cases, an element can be aligned using nominal values of fiducial locations without use of the computer. Optical surveying is used in the alignment of NIT and SIT, low field bend magnets, wigglers, RF cavities, and insertion quadrupoles.

  14. Storage rings, internal targets and PEP

    Energy Technology Data Exchange (ETDEWEB)

    Spencer, J.E.

    1986-11-01

    Storage rings with internal targets are described, using PEP as an example. The difference between electrons and heavier particles such as protons, antiprotons, and heavy ions is also discussed because it raises possibilities of bypass insertions for more exotic experiments. PEP is compared to other rings in various contexts to verify the assertion that it is an ideal ring for many fundamental and practical applications that can be carried on simultaneously. (LEW)

  15. An asymmetric B factory based on PEP

    Energy Technology Data Exchange (ETDEWEB)

    1991-02-01

    In this report we describe a design for a high-luminosity Asymmetric B Factory to be built in the PEP tunnel on the SLAC site. This proposal, a collaborative effort SLAC, LBL, and LLNL, is the culmination of more than two years of effort aimed at the design and construction of an asymmetric e{sup +}e{sup {minus}} collider capable of achieving a luminosity of L = 3 {times} 10{sup 33} cm{sup {minus}2} s{sup {minus}1}. The configuration adopted utilizes two storage rings, and electron ring operating at 9 GeV and a positron ring at 3.1 GeV, each with a circumference of 2200 m. The high-energy ring is an upgrade of the PEP storage ring at SLAC; all PEP magnets and most power supplies will be reused. The upgrade consists primarily of replacing the PEP vacuum chamber and RF system with newly designed versions optimized for the high-current environment of the B Factory. The low-energy ring will be newly constructed and will be situated atop the high-energy ring in the PEP tunnel. Utilities already installed in the PEP tunnel are largely sufficient to operate the two B Factory storage rings.

  16. Supersymmetric Perturbations of the M5 brane

    CERN Document Server

    Niarchos, Vasilis

    2014-01-01

    We study long-wavelength supersymmetric deformations of brane solutions in supergravity using an extension of previous ideas within the general scheme of the blackfold approach. As a concrete example, we consider long-wavelength perturbations of the planar M2-M5 bound state solution in eleven-dimensional supergravity. We propose a specific ansatz for the first order deformation of the supergravity fields and explore how this deformation perturbs the Killing spinor equations. We find that a special part of these equations gives a projection equation on the Killing spinors that has the same structure as the $\\kappa$-symmetry condition of the abelian M5 brane theory. Requiring a match between supergravity and gauge theory implies a specific non-linear gauge-gravity map between the bosonic fields of the abelian M5 brane theory and the gravity-induced fluid-like degrees of freedom of the blackfold equations that control the perturbative gravity solution. This observation sheds new light on the SUGRA/DBI correspond...

  17. Early aftershock decay rate of the M6 Parkfield earthquake

    Science.gov (United States)

    Peng, Z.; Vidale, J. E.

    2004-12-01

    Mainshock rupture is typically followed by its aftershocks that diminish in rate approximately as the reciprocal of the elapse time. However, it is notoriously difficult to observe aftershock activity in the noisy aftermath of larger earthquakes. Many aftershocks were missed in the existing seismicity catalogs in the initial few minutes (Kagan, 2004). Yet this period holds valuable information about the transition from mainshock rupture to sporadic aftershocks, and the friction laws that control earthquakes. The Parkfield section of the San Andreas fault is one of most densely seismometered places in the world. Many near-fault, non-clipped and continuous recordings of the M6 Parkfield earthquake and its aftermath have been recovered, providing an excellent opportunity for us to study the aftershock decay rates in the first few hundred seconds after the mainshock. We have so far analyzed recordings from station PKD and 13 stations in the Parkfield High Resolution Seismic Network. By scrutinizing the high-frequency signal, we are able to distinguish mainshock coda from early aftershocks. We find up to 10 times more aftershocks in the first 1000 s than in the USGS NCSN catalog. More than 30 events are detected in the first 200 s after the mainshock. None of these events are in the USGS NCSN catalog. Preliminary results suggest a strong deficit of aftershocks in the first 100 s after the mainshock relative to a 1/t aftershock rate decay. This pattern is consistent with a lack of seismicity in the first 120 s following the 10/31/2001 M5.1 Anza earthquake (Kilb et al., 2004), and our study of early aftershock rates using data from HiNet array in Japan (Vidale et al., 2004). Our observations will allow us to test the prediction of such an interval in rate-and-state friction models prior to the onset of the 1/t aftershock decay rate (Dieterich, 1994).

  18. PEP-II injection timing and controls

    Energy Technology Data Exchange (ETDEWEB)

    Bharadwaj, V.; Browne, M.; Crane, M.; Gromme, T.; Himel, T.; Ross, M.; Stanek, M. [Stanford Linear Accelerator Center, Menlo Park, CA (United States); Ronan, M. [Lawrence Berkeley National Lab., CA (United States)

    1997-07-01

    Hardware has been built and software written and incorporated in the existing SLC accelerator control system to control injection of beam pulses from the accelerator into the PEP-II storage rings currently under construction. Hardware includes a CAMAC module to delay the machine timing fiducial in order that a beam pulse extracted from a damping ring will be injected into a selected group of four 476 MHz buckets in a PEP-II ring. Further timing control is accomplished by shifting the phase of the bunches stored in the damping rings before extraction while leaving the phase of the PEP-II stored beam unchanged. The software which drives timing devices on a pulse-to-pulse basis relies on a dedicated communication link on which one scheduling microprocessor broadcasts a 128-bit message to all distributed control microprocessors at 360 Hz. PEP-II injection will be driven by the scheduling microprocessor according to lists specifying bucket numbers in arbitrary order, and according to scheduling constraints maximizing the useful beam delivered to the SLC collider currently in operation. These lists will be generated by a microprocessor monitoring the current stored per bucket in each of the PEP-II rings.

  19. Chromosomal mapping of the human M6 genes

    Energy Technology Data Exchange (ETDEWEB)

    Olinsky, S.; Loop, B.T.; DeKosky, A. [Univ. of Pittsburgh, PA (United States)] [and others

    1996-05-01

    M6 is a neuronal membrane glycoprotein that may have an important role in neural development. This molecule was initially defined by a monoclonal antibody that affected the survival of cultured cerebellar neurons and the outgrowth of neurites. The nature of the antigen was discovered by expression cDNA cloning using this monoclonal antibody. Two distinct murine M6 cDNAs (designated M6a and M6b) whose deduced amino acid sequences were remarkably similar to that of the myelin proteolipid protein human cDNA and genomic clones encoding M6a and M6b and have characterized them by restriction mapping, Southern hybridization with cDNA probes, and sequence analysis. We have localized these genes within the human genome by FISH (fluorescence in situ hybridization). The human M6a gene is located at 4q34, and the M6b gene is located at Xp22.2 A number of human neurological disorders have been mapped to the Xp22 region, including Aicardi syndrome (MIM 304050), Rett syndrome (MIM 312750), X-linked Charcot-Marie-Tooth neuropathy (MIM 302801), and X-linked mental retardation syndromes (MRX1, MIM 309530). This raises the possibility that a defect in the M6b gene is responsible for one of these neurological disorders. 8 refs., 3 figs.

  20. Linkage of Pep-2 and Apk on mouse chromosome 10.

    Science.gov (United States)

    Womack, J E; Ashley, S; Barnett, L B; Lewis, S E

    1986-10-01

    An ethylnitrosourea (ENU)-induced electrophoretic variant of mouse PEP-2, a tripeptidase, has been used to determine the location of the structural gene on chromosome 10. Gene order and recombination frequencies were estimated as Apk-21.8 +/- 3.9%-Pep-2-3.7 +/- 2.1%-Sl. Methods for rapid determination of Apk and Pep-2 alleles by cellulose acetate electrophoresis and a valuable linkage testing stock carrying the unique Apkm and Pep-2b alleles are described.

  1. Soybean (Glycine max) allergy in Europe: Gly m 5 (beta-conglycinin) and Gly m 6 (glycinin) are potential diagnostic markers for severe allergic reactions to soy

    DEFF Research Database (Denmark)

    Holzhauser, Thomas; Wackermann, Olga; Ballmer-Weber, Barbara K

    2009-01-01

    BACKGROUND: Soybean is considered an important allergenic food, but published data on soybean allergens are controversial. OBJECTIVE: We sought to identify relevant soybean allergens and correlate the IgE-binding pattern to clinical characteristics in European patients with confirmed soy allergy....

  2. Precision radial velocities of 15 M5 - M9 dwarfs

    CERN Document Server

    Barnes, J R; Jones, H R A; Jeffers, S V; Rojo, P; Arriagada, P; Jordan, A; Minniti, D; Tuomi, M; Pinfield, D; Anglada-Escude, G

    2014-01-01

    We present radial velocity measurements of a sample of M5V-M9V stars from our Red-Optical Planet Survey, ROPS, operating at 0.65-1.025 micron. Radial velocities for 15 stars, with r.m.s. precision down to 2.5 m/s over a week long time scale are achieved using Thorium-Argon reference spectra. We are sensitive to planets with m_psin(i) >= 1.5 MEarth (3 MEarth at 2-sigma) in the classical habitable zone and our observations currently rule out planets with m_psin(i) > 0.5 MJup at 0.03 AU for all our targets. A total of 9 of the 15 targets exhibit r.m.s. 10 MEarth in 0.03 AU orbits. Since the mean rotation velocity is of order 8 km/s for an M6V star and 15 km/s by M9V, we avoid observing only slow rotators that would introduce a bias towards low axial inclination i << 90 deg systems, which are unfavourable for planet detection. Our targets with the highest vsini values exhibit radial velocities significantly above the photon-noise limited precision, even after accounting for vsini. We therefore monitored st...

  3. Functional and structural characteristics of anticancer peptide Pep27 analogues

    Directory of Open Access Journals (Sweden)

    Seo Youn-Kyung

    2005-07-01

    Full Text Available Abstract Background A secreted peptide Pep27 initiates the cell death program in S. pneumoniae through signal transduction. This study was undertaken to evaluate the relation between the structure and cytotoxic activity of Pep27 and its analogues on cancer cells. Results Pep27anal2 characterized substituting (2R→W, (4E→W, (11S→W and (13Q→W in native Pep27, exhibited greater hydrophobicity and anticancer activity than Pep27 and other analogues. The IC50 values of Pep27anal2 were approximately 10 – 30 μM in a number of cell lines (AML-2, HL-60, Jurkat, MCF-7 and SNU-601. Confocal microscopy showed that Pep27anal2-FITC was localized in the plasma membrane, and then moving from the membrane to subcellular compartments with the initiation of membrane blebbing. Flow cytometric analysis using propidium iodide and Annexin V also revealed that Pep27anal2 induced apoptosis with minor membrane damage. Electron microscopy revealed that Pep27 induced apoptosis in Jurkat cells. The anticancer activity of Pep27anal2 was neither abrogated by pan-caspase inhibitor (Z-VAD-fmk nor related to cytochrome c release from mitochondria. The 3D solution structures of these two Pep27 peptides revealed that both form a random coil conformation in water; however, they adopted stable α-helical conformations in solutions. Conclusion The results indicate that Pep27anal2 can penetrate the plasma membrane, and then induce apoptosis in both caspase-and cytochrome c-independent manner. The hydrophobicity of Pep27anal2 appears to play an important role in membrane permeabilization and/or anticancer properties. The structure-functional relationships of these peptides are also discussed. It is proposed that Pep27anal2 is a potential candidate for anticancer therapeutic agents.

  4. M/M/1/m系统算子的本征值特性(m=5,6)%The Characteristics of Eigenvalue of M/M/1/m(m =5,6)

    Institute of Scientific and Technical Information of China (English)

    盖平; 高超; 唐慧; 赵立杰

    2010-01-01

    研究了m=5,6时,M/M/1/m算子本征值特性:m=6时相应本征值的代数重为1;m=5,6时,相应的系统算子的非零本征值相互交替;m=6时的最大非零本征值比m=5时更靠近0点.这种特性延续了m=1,2,3,4,5时相应的特性.另外给出了m=5,6时,相应的po(t)图像.

  5. Structure and abrasive wear resistance of R6M5 steel-tungsten carbide composite coatings

    Science.gov (United States)

    Gnyusov, S. F.

    2012-09-01

    Features of the structure formation, composition, and abrasive wear resistance of R6M5 steel-tungsten carbide (R6M5-WC) composite coatings have been studied as dependent on the WC content. The introduction of ˜20 wt % WC into the hardening composition leads to an increase in the fraction of M6C carbide (in the form of eutectic inclusions with average size ˜5.9 μm at grain boundaries and dispersed ˜0.25 μm particles in the volume of grains), while a large proportion of metastable austenite (˜88 vol %) is still retained. The R6M5-WC coatings exhibit high abrasive wear resistance, which is ensured by the γ → α' martensite transformation during friction and a muiltimodal size distribution of hardening particles.

  6. Recent high precision surveys at PEP

    Energy Technology Data Exchange (ETDEWEB)

    Sah, R.C.

    1980-12-01

    The task of surveying and aligning the components of PEP has provided an opportunity to develop new instruments and techniques for the purpose of high precision surveys. The new instruments are quick and easy to use, and they automatically encode survey data and read them into the memory of an on-line computer. When measurements of several beam elements have been taken, the on-line computer analyzes the measured data, compares them with desired parameters, and calculates the required adjustments to beam element support stands.

  7. PEP-II RF feedback system simulation

    Energy Technology Data Exchange (ETDEWEB)

    Tighe, R. [Stanford Linear Accelerator Center, Menlo Park, CA (United States)

    1996-08-01

    A model containing the fundamental impedance of the PEP-II cavity along with the longitudinal beam dynamics and RF feedback system components is in use. It is prepared in a format allowing time-domain as well as frequency-domain analysis and full graphics capability. Matlab and Simulink are control system design and analysis programs (widely available) with many built-in tools. The model allows the use of compiled C-code modules for compute intensive portions. We desire to represent as nearly as possible the components of the feedback system including all delays, sample rates and applicable nonlinearities. (author)

  8. PEP-II: An asymmetric B factory. Conceptual design report

    Energy Technology Data Exchange (ETDEWEB)

    1993-06-01

    In this report, the authors have described an updated conceptual design for the high-luminosity Asymmetric B Factory (PEP-II) to be built in the PEP tunnel culmination of more than four years of effort aimed at the design and construction of an asymmetric e{sub +}e{sub {minus}} collider capable of achieving a luminosity of L = 3 {times} 10{sup 33} cm{sup {minus}2} s{sup {minus}1}. All aspects of the conceptual design were scrutinized in March 1991 by a DOE technical review committee chaired by Dr. L. Edward Temple. The design was deemed feasible and capable of achieving its physics goals. Furthermore, the cost estimate, schedule, and management plan for the project were fully endorsed by the committee. This updated conceptual design report captures the technical progress since the March 1991 review and reflects the lower cost estimate corresponding to the improved design. Although the PEP-II design has continued to evolve, no technical scope changes have been made that invalidate the conclusion of the DOE review. The configuration adopted utilizes two storage rings, an electron ring operating at 9 GeV and a positron ring at 3.1 GeV, each with a circumference of 2200 m. The high-energy ring is an upgrade of the PEP storage ring at SLAC; all PEP magnets and most power supplies will be reused. The upgrade consists primarily of replacing the PEP vacuum chamber and RF system with newly designed versions optimized for the high-current environment of PEP-II. The low-energy ring will be newly constructed and will be situated atop the high-energy ring in the PEP tunnel. Utilities already installed in the PEP tunnel are largely sufficient to operate the two PEP-II storage rings.

  9. PEP-II Transverse Feedback Electronics Upgrade

    CERN Document Server

    Weber, Jonah; Chin, Michael; Doolittle, Lawrence

    2005-01-01

    The PEP-II B Factory at the Stanford Linear Accelerator Center (SLAC) requires an upgrade of the transverse feedback system electronics. The new electronics require 12-bit resolution and a minimum sampling rate of 238 Msps. A Field Programmable Gate Array (FPGA) is used to implement the feedback algorithm. The FPGA also contains an embedded PowerPC 405 (PPC-405) processor to run control system interface software for data retrieval, diagnostics, and system monitoring. The design of this system is based on the Xilinx® ML300 Development Platform, a circuit board set containing an FPGA with an embedded processor, a large memory bank, and other peripherals. This paper discusses the design of a digital feedback system based on an FPGA with an embedded processor. Discussion will include specifications, component selection, and integration with the ML300 design.

  10. PEP-II Transverse Feedback Electronics Upgrade

    Energy Technology Data Exchange (ETDEWEB)

    Weber, J.M.; Chin, M.J.; Doolittle, L.R.; /LBL, Berkeley; Akre, R.; /SLAC

    2006-03-13

    The PEP-II B Factory at the Stanford Linear Accelerator Center (SLAC) requires an upgrade of the transverse feedback system electronics. The new electronics require 12-bit resolution and a minimum sampling rate of 238 Msps. A Field Programmable Gate Array (FPGA) is used to implement the feedback algorithm. The FPGA also contains an embedded PowerPC 405 (PPC-405) processor to run control system interface software for data retrieval, diagnostics, and system monitoring. The design of this system is based on the Xilinx{reg_sign} ML300 Development Platform, a circuit board set containing an FPGA with an embedded processor, a large memory bank, and other peripherals. This paper discusses the design of a digital feedback system based on an FPGA with an embedded processor. Discussion will include specifications, component selection, and integration with the ML300 design.

  11. PEP-II Transverse Feedback Electronics Upgrade

    Energy Technology Data Exchange (ETDEWEB)

    Weber, J.; Chin, M.; Doolittle, L.; Akre, R.

    2005-05-09

    The PEP-II B Factory at the Stanford Linear Accelerator Center (SLAC) requires an upgrade of the transverse feedback system electronics. The new electronics require 12-bit resolution and a minimum sampling rate of 238 Msps. A Field Programmable Gate Array (FPGA) is used to implement the feedback algorithm. The FPGA also contains an embedded PowerPC 405 (PPC-405) processor to run control system interface software for data retrieval, diagnostics, and system monitoring. The design of this system is based on the Xilinx(R) ML300 Development Platform, a circuit board set containing an FPGA with an embedded processor, a large memory bank, and other peripherals. This paper discusses the design of a digital feedback system based on an FPGA with an embedded processor. Discussion will include specifications, component selection, and integration with the ML300 design.

  12. PEP725 Pan European Phenological Database

    Science.gov (United States)

    Koch, E.; Adler, S.; Lipa, W.; Ungersböck, M.; Zach-Hermann, S.

    2010-09-01

    Europe is in the fortunate situation that it has a long tradition in phenological networking: the history of collecting phenological data and using them in climatology has its starting point in 1751 when Carl von Linné outlined in his work Philosophia Botanica methods for compiling annual plant calendars of leaf opening, flowering, fruiting and leaf fall together with climatological observations "so as to show how areas differ". Recently in most European countries, phenological observations have been carried out routinely for more than 50 years by different governmental and non governmental organisations and following different observation guidelines, the data stored at different places in different formats. This has been really hampering pan European studies as one has to address many network operators to get access to the data before one can start to bring them in a uniform style. From 2004 to 2009 the COST-action 725 established a European wide data set of phenological observations. But the deliverables of this COST action was not only the common phenological database and common observation guidelines - COST725 helped to trigger a revival of some old networks and to establish new ones as for instance in Sweden. At the end of 2009 the COST action the database comprised about 8 million data in total from 15 European countries plus the data from the International Phenological Gardens IPG. In January 2010 PEP725 began its work as follow up project with funding from EUMETNET the network of European meteorological services and of ZAMG the Austrian national meteorological service. PEP725 not only will take over the part of maintaining, updating the COST725 database, but also to bring in phenological data from the time before 1951, developing better quality checking procedures and ensuring an open access to the database. An attractive webpage will make phenology and climate impacts on vegetation more visible in the public enabling a monitoring of vegetation development.

  13. Role for M5 muscarinic acetylcholine receptors in cocaine addiction.

    Science.gov (United States)

    Fink-Jensen, Anders; Fedorova, Irina; Wörtwein, Gitta; Woldbye, David P D; Rasmussen, Thøger; Thomsen, Morgane; Bolwig, Tom G; Knitowski, Karen M; McKinzie, David L; Yamada, Masahisa; Wess, Jürgen; Basile, Anthony

    2003-10-01

    Muscarinic cholinergic receptors of the M5 subtype are expressed by dopamine-containing neurons of the ventral tegmentum. These M5 receptors modulate the activity of midbrain dopaminergic neurons, which play an important role in mediating reinforcing properties of abused psychostimulants like cocaine. The potential role of M5 receptors in the reinforcing effects of cocaine was investigated using M5 receptor-deficient mice in a model of acute cocaine self-administration. The M5-deficient mice self-administered cocaine at a significantly lower rate than wild-type controls. In the conditioned place preference procedure, a classic test for evaluating the rewarding properties of drugs, M5-deficient mice spent significantly less time in the cocaine-paired compartment than control mice. Moreover, the severity of the cocaine withdrawal syndrome (withdrawal-associated anxiety measured in the elevated plus-maze) was significantly attenuated in mice lacking the M5 receptor. These results demonstrate that M5 receptors play an important role in mediating both cocaine-associated reinforcement and withdrawal.

  14. The ShakeMaps of the Amatrice, M6, earthquake

    Directory of Open Access Journals (Sweden)

    Licia Faenza

    2016-11-01

    Full Text Available In this paper we describe the performance of the ShakeMap software package and the fully automatic procedure, based on manually revised location and magnitude, during the main event of the Amatrice sequence with special emphasis to the M6 main shock, that struck central Italy on the 24th August 2016 at 1:36:32 UTC. Our results show that the procedure we developed in the last years, with real-time data exchange among those institutions acquiring strong motion data, allows to provide a faithful description of the ground motion experienced throughout a large region in and around the epicentral  area. The prompt availability of the rupture fault model, within three hours after the earthquake occurrence, provided a better descriptions of the level of strong ground motion throughout the affected area.  Progressive addition of  station data and  manual verification of the data insures improvements in the description of the experienced ground motions.  In particular, comparison between the MCS intensity shakemaps and preliminary field macroseismic reports show favourable similarities.  Finally the overall  spatial pattern of the ground motion of the main shock is consistent with reported rupture directivity toward NW and reduced levels of ground shaking toward SW probably linked to the peculiar source effects of the earthquake.

  15. Astronomical alignments as the cause of ~M6+ seismicity

    CERN Document Server

    Omerbashich, Mensur

    2011-01-01

    I here demonstrate empirically my georesonator concept in which tidally induced magnification of Earth masses' resonance causes seismicity. To that end, I show that all strong (~M6+) earthquakes of 2010 occurred during the Earth's long (t>3 day) astronomical alignments within our solar system. I then show that the same holds true for all very strong (~M8+) earthquakes of the decade of 2000s. Finally, the strongest (M8.6+) earthquakes of the past century are shown to have occurred during the Earth's multiple long alignments, whereas half of the high-strongest (M9+) ones occurred during the Full Moon. I used the comet C/2010 X1 (Elenin), as it has been adding to robustness in terms of very strong seismicity since 2007 (in terms of strongest seismicity: since 1965). The Elenin will continue intensifying the Earth's very strong seismicity until August-October, 2011. Approximate forecast of earthquakes based on my discoveries is feasible. This demonstration proves my hyperresonator concept, arrived at earlier as a...

  16. Scale-Up, Production, and Procurement of PEP Simulants

    Energy Technology Data Exchange (ETDEWEB)

    Scheele, Randall D.; Brown, Garrett N.; Kurath, Dean E.

    2009-10-29

    Pacific Northwest National Laboratory has been tasked by Bechtel National Inc. on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility. The Pretreatment Engineering Platform (PEP) was designed, constructed, and operated as part of a plan to respond to issue M12, “Undemonstrated Leaching Processes.” The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. This report provides the lessons learned regarding the manufacture and delivery of simulated feeds for PEP testing.

  17. Instrumentation and diagnostics for PEP-II

    Science.gov (United States)

    Fisher, Alan S.

    1998-12-01

    PEP-II is a 2.2 km-circumference collider with a 2.1 A, 3.1 GeV positron ring (the low-energy ring) 1 m above a 1 A, 9 GeV electron ring (the high-energy ring); both rings are designed to allow an upgrade to 3 A. Since June 1997, we have had three runs totaling 14 weeks to commission the full HER, reaching a current of 0.75 A. Positrons were transported through the first 90 m of the LER in January 1998, with full-ring tests planned for the summer. This workshop provides a timely opportunity to review the design of the beam diagnostics and their performance, with an emphasis on what works, what doesn't, and what we're doing to improve it. This paper discusses: the synchrotron-light monitor, including both transverse imaging onto a CCD camera and longitudinal measurements with a streak camera; beam position monitors, with processors capable of 1024-turn records, FFTs, and phase-advance measurements; tune measurements with a spectrum analyzer, including software for peak tracking; measurements of both the total ring current and the charge in each bucket, for real-time control of the fill; and beam loss monitors using small Cherenkov detectors for measuring losses from both stored and injected beam.

  18. Power Extension Package (PEP) system definition extension, orbital service module systems analysis study. Volume 3: PEP analysis and tradeoffs

    Science.gov (United States)

    1979-01-01

    The objectives, conclusions, and approaches for accomplishing 19 specific design and analysis activities related to the installation of the power extension package (PEP) into the Orbiter cargo bay are described as well as those related to its deployment, extension, and retraction. The proposed cable handling system designed to transmit power from PEP to the Orbiter by way of the shuttle remote manipulator system is described and a preliminary specification for the gimbal assembly, solar array drive is included.

  19. The sinusoidal periodicity nature for M>=5 global earthquakes

    CERN Document Server

    Zhang, Z X

    2016-01-01

    By using the M>=5 global earthquake data for Jan. 1950 to Dec. 2015, we performed statistical analyses for the parameters magnitude, time, and depth on a yearly scale. The magnitude spectrum, which is the earthquake number accumulated at different magnitudes, had an exponential distribution. For the first time, we report a very significant characteristic of the sinusoidal periodic variation in the spectral index. The cycle of the sine function fitting was 30.98 years. The concept of annual equivalent total magnitude (AETM) of total released energy for each year was introduced and the trend variation of AETM year by year was studied. Overall, the global AETM of earthquakes with M>=5 displayed a certain upward trend as the years elapsed. At the same time, the change of the average epicenter depth of the global earthquakes (M>=5) in each year was analyzed.

  20. The Danish PEP registry: experience with the use of postexposure prophylaxis (PEP) following sexual exposure to HIV from 1998 to 2006

    DEFF Research Database (Denmark)

    Lunding, Suzanne; Katzenstein, Terese L; Kronborg, Gitte

    2010-01-01

    risk group, and 63% involved exposure by receptive anal intercourse. PEP was administered within 24 hours in 95% of the cases and the median time to initiation (N = 225) was 11.0 hours (range 0.5-60.0). PEP was completed by 65%. CONCLUSIONS: This nationwide study showed a steady but moderate increase...... in the use of PEP after sexual HIV-exposure from 1998 to 2006. Time to initiation of PEP was low and the PEP prescription practice was targeted toward high risk exposures....

  1. The Danish PEP registry: experience with the use of postexposure prophylaxis (PEP) following sexual exposure to HIV from 1998 to 2006

    DEFF Research Database (Denmark)

    Lunding, Suzanne; Katzenstein, Terese L; Kronborg, Gitte

    2010-01-01

    : There were 374 cases of PEP use after sexual exposure. The incidence increased from 5 cases in 1997 to 87 in 2006. PEP was used by heterosexuals (40%) as well as men who have sex with men (57%). The HIV-status of the source was unknown in 41% of the cases of which 90% involved a source belonging to a high...... in the use of PEP after sexual HIV-exposure from 1998 to 2006. Time to initiation of PEP was low and the PEP prescription practice was targeted toward high risk exposures....

  2. PEP Support: Laboratory Scale Leaching and Permeate Stability Tests

    Energy Technology Data Exchange (ETDEWEB)

    Russell, Renee L.; Peterson, Reid A.; Rinehart, Donald E.; Buchmiller, William C.

    2010-05-21

    This report documents results from a variety of activities requested by the Hanford Tank Waste Treatment and Immobilization Plant (WTP). The activities related to caustic leaching, oxidative leaching, permeate precipitation behavior of waste as well as chromium (Cr) leaching are: • Model Input Boehmite Leaching Tests • Pretreatment Engineering Platform (PEP) Support Leaching Tests • PEP Parallel Leaching Tests • Precipitation Study Results • Cr Caustic and Oxidative Leaching Tests. Leaching test activities using the PEP simulant provided input to a boehmite dissolution model and determined the effect of temperature on mass loss during caustic leaching, the reaction rate constant for the boehmite dissolution, and the effect of aeration in enhancing the chromium dissolution during caustic leaching. Other tests were performed in parallel with the PEP tests to support the development of scaling factors for caustic and oxidative leaching. Another study determined if precipitate formed in the wash solution after the caustic leach in the PEP. Finally, the leaching characteristics of different chromium compounds under different conditions were examined to determine the best one to use in further testing.

  3. The Characteristic Analysis and Seismic Triggering Study of the M6.2 and M6.1 Dayao Earthquake Sequences in 2003

    Institute of Scientific and Technical Information of China (English)

    Hua Wei; Liu Jie; Zheng Sihua; Chen Zhangli

    2006-01-01

    The high-resolution hypocenter locations of the mainshocks on July 21 (M6.2) and October 16, 2003 ( M6.1 ) and their aftershock sequences are determined in Dayao, Yunnan by using a double-difference earthquake location algorithm. The results show that the epicenters of the two mainshocks are very close to each other and the distribution of the aftershock sequence appears to be very linear. The distribution of the earthquake sequence is very consistent with the focal mechanism, and both malnshocks are of nearly vertical right-lateral fault. Unlike most other double earthquakes in the Yunnan area, the aftershock distribution of the M6.2 and M6.1 Dayao earthquakes does not appear to be a conjugated distribution but to be in a line, and there are some stacks in the two earthquake sequences. It can be inferred that they are all controlled by the same fault. The distribution of aftershocks is asymmetrical with respect to the mainshock location and appears to be unilateral. The aftershocks of the M6.2 mainshock centralize in the northwest of M6.2 earthquake and the aftershocks of the M6.1 earthquake are in the southeast of the mainshock, moreover, the M6.1 earthquake appears to be another rupture on the southeastern extension of the same fault as the M6.2 earthquake. The results of Coulomb failure static stress changes Aσf show that the earthquake on July 21 (M6.2) apparently triggered the earthquake on October 16 (M6.1), the two mainshocks have stress triggering to their off-fault aftershocks to different extents, and the M6.5 earthquake that occurred in Yao'an in 2000 also triggered the occurrence of the two Dayao earthquakes.

  4. The Blue Straggler Population of the Globular Cluster M5

    CERN Document Server

    Lanzoni, B; Ferraro, F R; Mancini, C; Beccari, G; Rood, R T; Mapelli, M; Sigurdsson, S

    2007-01-01

    By combining high-resolution HST and wide-field ground based observations, in ultraviolet and optical bands, we study the Blue Stragglers Star (BSS) population of the galactic globular cluster M5 (NGC 5904) from its very central regions up to its periphery. The BSS distribution is highly peaked in the cluster center, decreases at intermediate radii and rises again outward. Such a bimodal distribution is similar to those previously observed in other globular clusters (M3, 47Tucanae, NGC6752). As for these clusters, dynamical simulations suggest that, while the majority of BSS in M5 could be originated by stellar collisions, a significant fraction (20-40%) of BSS generated by mass transfer processes in primordial binaries is required to reproduce the observed radial distribution. A candidate BSS has been detected beyond the cluster tidal radius. If confirmed, this could represent an interesting case of an "evaporating" BSS.

  5. Wilson Loops for M2- and M5-brane spaces

    CERN Document Server

    Quijada, Edward

    2015-01-01

    We calculate the quark and anti-quark interaction energy in different positions in spaces generated by $N$ coincident $M2$- and $M5$-branes. We use the Maldacena-Rey-Yee method for calculating this energy as a function of quark-antiquark separation. We obtain the solution for these problems as integrals of the metric elements. For limiting regimes we find simpler solutions for which some potentials exhibit a confinement behavior.

  6. Self-administered chest physiotherapy in cystic fibrosis: a comparative study of high-pressure PEP and autogenic drainage.

    Science.gov (United States)

    Pfleger, A; Theissl, B; Oberwaldner, B; Zach, M S

    1992-01-01

    Fourteen patients with cystic fibrosis were trained in 2 self-administered chest physiotherapy (PT) techniques: high-pressure PEP-mask physiotherapy (PEP), and autogenic drainage (AD). They then visited the clinic on 5 consecutive days, and, in a random order, performed 1 of the following: PEP, AD, PEP followed by AD (PEP-AD), AD followed by PEP (AD-PEP), and, no PT except for spontaneous coughing. Lung function was measured repeatedly before, during, and after PT; time needed for and sputum produced by each form of PT was recorded. PEP produced the highest amount of sputum, followed by PEP-AD, AD-PEP, and AD; all 4 forms of PT produced significantly more sputum than coughing. Lung function improved significantly after PEP, AD, and PEP-AD, but PEP-induced changes did not exceed those after AD. Within the investigated group, the PEP-induced lung function improvement per milliliter of sputum produced was significantly lower for those patients with airway hyperreactivity. The fact that the highest sputum yield with PEP was not reflected in higher PEP-effected lung function changes might thus be explained by PEP-induced bronchospasm in patients with airway hyperreactivity. PEP clears more sputum than AD or combined techniques; patients with airway hyperreactivity, however, should either prefer AD or should take a bronchodilator premedication before PEP.

  7. NeuroPep: a comprehensive resource of neuropeptides.

    Science.gov (United States)

    Wang, Yan; Wang, Mingxia; Yin, Sanwen; Jang, Richard; Wang, Jian; Xue, Zhidong; Xu, Tao

    2015-01-01

    Neuropeptides play a variety of roles in many physiological processes and serve as potential therapeutic targets for the treatment of some nervous-system disorders. In recent years, there has been a tremendous increase in the number of identified neuropeptides. Therefore, we have developed NeuroPep, a comprehensive resource of neuropeptides, which holds 5949 non-redundant neuropeptide entries originating from 493 organisms belonging to 65 neuropeptide families. In NeuroPep, the number of neuropeptides in invertebrates and vertebrates is 3455 and 2406, respectively. It is currently the most complete neuropeptide database. We extracted entries deposited in UniProt, the database (www.neuropeptides.nl) and NeuroPedia, and used text mining methods to retrieve entries from the MEDLINE abstracts and full text articles. All the entries in NeuroPep have been manually checked. 2069 of the 5949 (35%) neuropeptide sequences were collected from the scientific literature. Moreover, NeuroPep contains detailed annotations for each entry, including source organisms, tissue specificity, families, names, post-translational modifications, 3D structures (if available) and literature references. Information derived from these peptide sequences such as amino acid compositions, isoelectric points, molecular weight and other physicochemical properties of peptides are also provided. A quick search feature allows users to search the database with keywords such as sequence, name, family, etc., and an advanced search page helps users to combine queries with logical operators like AND/OR. In addition, user-friendly web tools like browsing, sequence alignment and mapping are also integrated into the NeuroPep database. Database URL: http://isyslab.info/NeuroPep

  8. Towards Policy Enforcement Point as a Service (PEPS)

    OpenAIRE

    Shaghaghi, Arash; Kaafar, Mohamed Ali; Scott-Hayward, Sandra; Kanhere, Salil S.; Jha, Sanjay

    2017-01-01

    In this paper, we coin the term Policy Enforcement as a Service (PEPS), which enables the provision of innovative inter-layer and inter-domain Access Control. We leverage the architecture of Software-Defined-Network (SDN) to introduce a common network-level enforcement point, which is made available to a range of access control systems. With our PEPS model, it is possible to have a ‘defense in depth’ protection model and drop unsuccessful access requests before engaging the data provider (e.g...

  9. Towards Policy Enforcement Point as a Service (PEPS)

    OpenAIRE

    Shaghaghi, Arash; Ali, Mohamed; Kaafar; Scott-Hayward, Sandra; Kanhere, Salil S.; Jha, Sanjay

    2016-01-01

    In this paper, we coin the term Policy Enforcement as a Service (PEPS), which enables the provision of innovative inter-layer and inter-domain Access Control. We leverage the architecture of Software-Defined-Network (SDN) to introduce a common network-level enforcement point, which is made available to a range of access control systems. With our PEPS model, it is possible to have a `defense in depth' protection model and drop unsuccessful access requests before engaging the data provider (e.g...

  10. CNO and pep solar neutrino measurements and perspectives in Borexino

    Science.gov (United States)

    Davini, S.; Agostini, M.; Appel, S.; Bellini, G.; Benziger, J.; Bick, D.; Bonfini, G.; Bravo, D.; Caccianiga, B.; Calaprice, F.; Caminata, A.; Cavalcante, P.; Chepurnov, A.; D'Angelo, D.; Derbin, A.; Di Noto, L.; Drachnev, I.; Etenko, A.; Fomenko, K.; Franco, D.; Gabriele, F.; Galbiati, C.; Ghiano, C.; Giammarchi, M.; Goeger-Neff, M.; Goretti, A.; Gromov, M.; Hagner, C.; Hungerford, E.; Ianni, Aldo; Ianni, Andrea; Jedrzejczak, K.; Kaiser, M.; Kobychev, V.; Korablev, D.; Korga, G.; Kryn, D.; Laubenstein, M.; Lehnert, B.; Litvinovich, E.; Lombardi, F.; Lombardi, P.; Ludhova, L.; Lukyanchenko, G.; Machulin, I.; Manecki, S.; Maneschg, W.; Marcocci, S.; Meroni, E.; Meyer, M.; Miramonti, L.; Misiaszek, M.; Montuschi, M.; Mosteiro, P.; Muratova, V.; Neumair, B.; Oberauer, L.; Obolensky, M.; Ortica, F.; Pallavicini, M.; Papp, L.; Perasso, L.; Pocar, A.; Ranucci, G.; Razeto, A.; Re, A.; Romani, A.; Roncin, R.; Rossi, N.; Schönert, S.; Semenov, D.; Simgen, H.; Skorokhvatov, M.; Smirnov, O.; Sotnikov, A.; Sukhotin, S.; Suvorov, Y.; Tartaglia, R.; Testera, G.; Thurn, J.; Toropova, M.; Unzhakov, E.; Vishneva, A.; Vogelaar, R. B.; von Feilitzsch, F.; Wang, H.; Weinz, S.; Winter, J.; Wojcik, M.; Wurm, M.; Yokley, Z.; Zaimidoroga, O.; Zavatarelli, S.; Zuber, K.; Zuzel, G.

    2016-02-01

    The detection of neutrinos emitted in the CNO reactions in the Sun is one of the ambitious goals of Borexino Phase-II. A measurement of CNO neutrinos would be a milestone in astrophysics, and would allow to solve serious issues in current solar models. A precise measurement of the rate of neutrinos from the pep reaction would allow to investigate neutrino oscillations in the MSW transition region. The pep and CNO solar neutrino physics, the measurement in Borexino Phase-I and the perspectives for the new phase are reviewed in this proceeding.

  11. Polarization for the by-pass SLAC/PEP collider

    Energy Technology Data Exchange (ETDEWEB)

    Chao, A.W.

    1980-06-01

    It was suggested that one can collide the store e/sup +/ beam in PEP with the e/sup /minus// beam from SLAC to reach a center-of-mass energy higher than that achieved by the PEP colliding beams. Although the future of this PEP/SLAC collider is not yet certain, it is useful to first explore its physics possibilities. One possible version of the SLAC/PEP collider utilizes a by-pass at the interaction point; the stored beam is displaced vertically by a set of vertical bending magnets every time the linac beam arrives. One feature of this by-pass scheme that makes it attractive is that the amount of the vertical displacement of the by-pass can be chosen so that the spin polarization of the stored beam is made longitudinal at the point of interaction. In this note, we have studied the various depolarization effects of the stored e/sup +/ beam due to the perturbation of the by-pass magnets. 1 fig.

  12. Topology in quantum states. PEPS formalism and beyond

    Energy Technology Data Exchange (ETDEWEB)

    Aguado, M [Max-Planck-Institut fuer Quantenoptik. Hans-Kopfermann-Str. 1. D-85748 Garching (Germany); Cirac, J I [Max-Planck-Institut fuer Quantenoptik. Hans-Kopfermann-Str. 1. D-85748 Garching (Germany); Vidal, G [School of Physical Sciences. University of Queensland, Brisbane, QLD, 4072 (Australia)

    2007-11-15

    Topology has been proposed as a tool to protect quantum information encoding and processes. Work concerning the meaning of topology in quantum states as well as its characterisation in the projected entangled pair state (PEPS) formalism and related schemes is reviewed.

  13. Pep Gatell visited CERN - La Fura dels Baus -

    CERN Multimedia

    2016-01-01

    Pep Gatell Visited CERN. He is the artistic director of La Fura dels Baus. La Fura dels Baus is a Spanish theatrical group founded in 1979 in Barcelona, known for their urban theatre, use of unusual settings and blurring of the boundaries between audience and actor.

  14. Seismomagnetic effects from the long-awaited 28 September 2004 M 6.0 parkfield earthquake

    Science.gov (United States)

    Johnston, M.J.S.; Sasai, Y.; Egbert, G.D.; Mueller, R.J.

    2006-01-01

    , and this may have played a role in the final occurrence of the 28 September 2004 M 6.0 Parkfield earthquake. The absence of electric and magnetic field precursors for this, and other earthquakes with M 5-7.3 elsewhere in the San Andreas fault system, indicates useful prediction of damaging earthquakes seems unlikely using these electromagnetic data.

  15. Seismomagnetic Effects from the Long-awaited September 28, 2004, M6 Parkfield Earthquake

    Science.gov (United States)

    Johnston, M. J.; Sasai, Y.; Egbert, G. D.; Kappler, K.

    2005-12-01

    played a role in the final occurrence of the September 28, 2004 M6 Parkfield earthquake. The absence of electric and magnetic field precursors for this, and other earthquakes with M5-7.3 elsewhere on the San Andreas fault, indicates useful prediction of damaging earthquakes seems unlikely using these electromagnetic data.

  16. Particle Environment Package (PEP) for the ESA JUICE mission

    Science.gov (United States)

    Barabash, Stas; Brandt, Pontus; Wurz, Peter; PEP Team

    2016-10-01

    PEP is a suite of six (6) sensors arranged in 4 units to measure charged and neutral particles in the Jupiter magnetospheres and at the moons to answer four overarching science questions:1. How does the corotating magnetosphere of Jupiter interact with the complex and diverse environment of Ganymede?2. How does the rapidly rotating magnetosphere of Jupiter interact with the seemingly inert Callisto?3. What are the governing mechanisms and their global impacts of release of material into the Jovian magnetosphere from seemingly inert Europa and active Io?4. How do internal and solar wind drivers cause such energetic, time variable and multi-scale phenomena in the steadily rotating giant magnetosphere of Jupiter?PEP measures positive and negative ions, electrons, exospheric neutral gas, thermal plasma and energetic neutral atoms present in all domains of the Jupiter system over nine decades of energy from 1 MeV with full angular coverage.PEP provides instantaneous measurements of 3D flow of the ion plasma and composition to understand the magnetosphere and magnetosphere-moon interactions. It also measures instantaneously 3D electron plasma to investigate auroral processes at the moon and Jupiter. Measurements of the angular distributions of energetic electrons at sub-second resolution probe the acceleration mechanisms and magnetic field topology and boundaries.PEP combines global imaging via remote sensing using energetic neutral atoms (ENA) with in-situ measurements and performs global imaging of Europa/Io tori and magnetosphere combined with energetic ion measurements. Using low energy ENAs originating from the particle - surface interaction PEP investigate space weathering of the icy moons by precipitation particles. PEP will first-ever directly sample of the exospheres of Europa, Ganymede, and Callisto with extremely high mass resolution (M/ΔM > 1100).The PEP sensors are (1) an ion mass analyzer, (2) an electron spectrometer, (3) a low energy ENA imager, (4) a

  17. HyPEP FY06 Report: Models and Methods

    Energy Technology Data Exchange (ETDEWEB)

    DOE report

    2006-09-01

    The Department of Energy envisions the next generation very high-temperature gas-cooled reactor (VHTR) as a single-purpose or dual-purpose facility that produces hydrogen and electricity. The Ministry of Science and Technology (MOST) of the Republic of Korea also selected VHTR for the Nuclear Hydrogen Development and Demonstration (NHDD) Project. This research project aims at developing a user-friendly program for evaluating and optimizing cycle efficiencies of producing hydrogen and electricity in a Very-High-Temperature Reactor (VHTR). Systems for producing electricity and hydrogen are complex and the calculations associated with optimizing these systems are intensive, involving a large number of operating parameter variations and many different system configurations. This research project will produce the HyPEP computer model, which is specifically designed to be an easy-to-use and fast running tool for evaluating nuclear hydrogen and electricity production facilities. The model accommodates flexible system layouts and its cost models will enable HyPEP to be well-suited for system optimization. Specific activities of this research are designed to develop the HyPEP model into a working tool, including (a) identifying major systems and components for modeling, (b) establishing system operating parameters and calculation scope, (c) establishing the overall calculation scheme, (d) developing component models, (e) developing cost and optimization models, and (f) verifying and validating the program. Once the HyPEP model is fully developed and validated, it will be used to execute calculations on candidate system configurations. FY-06 report includes a description of reference designs, methods used in this study, models and computational strategies developed for the first year effort. Results from computer codes such as HYSYS and GASS/PASS-H used by Idaho National Laboratory and Argonne National Laboratory, respectively will be benchmarked with HyPEP results in the

  18. Supersymmetric attractors, topological strings, and the M5-brane CFT

    Science.gov (United States)

    Guica, Monica M.

    One of the purposes of this thesis is to present the consistent and unifying picture that emerges in string and M-theory with eight supercharges. On one hand, this involves classifying and relating supersymmetric objects that occur in N = 2 compactifications of string and M-theory on a Calabi-Yau manifold. These come in a surprisingly wide variety of four and five-dimensional black holes, black rings and their sometimes very complicated bound states. On the other hand, the topological string also makes its appearance in theories with eight supercharges, and turns out to compute certain black hole degeneracies. We dedicate the introduction and the first chapter to summarizing and reviewing the beautiful relationships between black holes, black rings, their dual conformal field theory and the topological string, and we also outline the remaining puzzles and issues. Some of the black holes in question can be obtained by multiply-wrapping an M-theory M5-brane on a self-intersecting four-cycle in the Calabi-Yau manifold. Their dual microscopic description is known, and consists of a two-dimensional conformal field theory (CFT) which is the low-energy limit of the gauge theory that resides on the worldvolume of the M5 brane. We show that in a certain limit the M5-brane CFT is - perhaps surprisingly - able to reproduce the entropy of a completely different type of black holes, those obtained from wrapped M2-branes, whose microscopic description has not yet been understood. We also argue that certain black hole bound states should also be described by the same CFT, which suggests a unifying description of the various black objects in eight-supercharge supergravity theories. Finally, we describe and present a proof of the so-called OSV conjecture, which states that the mixed partition function of N = 2 four-dimensional BPS black holes equals the modulus square of the type A topological string partition function. We also attempt to use this relationship to better understand

  19. The geometry of the M5-branes and TQFTs

    CERN Document Server

    Bonelli, G

    2001-01-01

    The calculation of the partition function for N M5-branes is addressed for the case in which the worldvolume wraps a manifold $T^2\\times M_4$, where $M_4$ is simply connected and Kaehler. This is done in a compactification of M-theory which induces the Vafa-Witten theory on $M_4$ in the limit of vanishing torus volume. The results follow from the equivalence of the BPS spectrum counting in the complementary limit of vanishing $M_4$ volumes and from a classification of the the moduli space of quantum vacua of the supersymmetric twisted theory in terms of associated spectral covers. This reduces the problem of the moduli counting to algebraic equations.

  20. 3D supergravity from wrapped M5-branes

    CERN Document Server

    Karndumri, Parinya

    2015-01-01

    Through consistent Kaluza-Klein reduction, we construct 3D N=2 gauged supergravities corresponding to twisted compactifications of M5-branes on a product of Riemann surfaces, including Kahler-Einstein four-manifolds. We extend the reduction to fermionic supersymmetry variations in order to determine the 3D Killing spinor equations and classify all (timelike) supersymmetric solutions. We show that the superpotential T dictates all supersymmetric solutions, not just AdS3 vacua. As a by-product, we identify an infinite class of new supersymmetric warped AdS3 (Godel) and warped dS3 critical points. Moreover, we show that T encodes the central charge and R symmetry of the dual N = (0,2) SCFTs in the large N limit. Upon uplift to 11D, we use this result to write the higher-dimensional geometries in canonical form and discuss the relation to existing classifications of supersymmetric AdS3 geometries.

  1. M3与M5的MICM鉴别

    Institute of Scientific and Technical Information of China (English)

    索翠平; 李寅; 赵霞

    2003-01-01

    @@ 急性早幼粒细胞自血病(M3型,acute promyelocytic leukemia,APL)和急性单核细胞白血病(M5型,acute monocytic leukemia,AMOL)同属于急性非淋巴细胞白血病.二者在临床与形态上均有相似之处,特别是细颗粒型急性早幼粒细胞白血病(M3b)在形态上更易被误诊为急性单核细胞白血病.但二者的治疗与预后却有很大的区别.在此,结合MICM分型原则对二者加以鉴别,以免造成误诊,导致不应有的后果.

  2. Groundwater Level Prediction using M5 Model Trees

    Science.gov (United States)

    Nalarajan, Nitha Ayinippully; Mohandas, C.

    2015-01-01

    Groundwater is an important resource, readily available and having high economic value and social benefit. Recently, it had been considered a dependable source of uncontaminated water. During the past two decades, increased rate of extraction and other greedy human actions have resulted in the groundwater crisis, both qualitatively and quantitatively. Under prevailing circumstances, the availability of predicted groundwater levels increase the importance of this valuable resource, as an aid in the planning of groundwater resources. For this purpose, data-driven prediction models are widely used in the present day world. M5 model tree (MT) is a popular soft computing method emerging as a promising method for numeric prediction, producing understandable models. The present study discusses the groundwater level predictions using MT employing only the historical groundwater levels from a groundwater monitoring well. The results showed that MT can be successively used for forecasting groundwater levels.

  3. 3D supergravity from wrapped M5-branes

    Science.gov (United States)

    Karndumri, Parinya; Ó Colgáin, Eoin

    2016-03-01

    Through consistent Kaluza-Klein reduction, we construct 3D N=2 gauged supergravities corresponding to twisted compactifications of M5-branes on a product of constant curvature Riemann surfaces, including Kähler-Einstein four-manifolds. We extend the reduction to fermionic supersymmetry variations in order to determine the 3D Killing spinor equations and classify all timelike supersymmetric solutions. As a by-product, we identify an infinite class of new supersymmetric warped AdS 3 (Gödel) and warped dS 3 solutions. Moreover, we show that the superpotential T encodes the central charge and R symmetry of the dual N=(0,2) SCFTs in the large N limit. We demonstrate that the R symmetry matches the canonical U(1) isometry from existing classifications of supersymmetric AdS 3 solutions to 11D supergravity with N=(0,2) supersymmetry.

  4. Study on S wave splitting in Dayao earthquake sequence with M=6.2 and M=6.1 in Yunnan in 2003

    Institute of Scientific and Technical Information of China (English)

    HUA Wei; LIU Jie; CHEN Zhang-li; ZHENG Si-hua

    2006-01-01

    The polarization direction of fast wave and the delay time between fast and slow wave were measured for two earthquake sequences occurred continuously on 21 July (M=6.2) and 16 October (M=6.1) in Dayao, Yunnan in 2003 using cross-correlation coefficient method, after determining the high-resolution hypocentral locations of the phenomena of S wave splitting are obvious in the two earthquake sequences, and the average polarization directions of fast wave in most stations are almost consistent with regional maximum horizontal compressive stress direction except the station Santai. There are bimodal fast directions in the polarization directions at station Santai and the mean polarization direction is N80°E, indicating an inconsistent phenomenon referred to regional maxiparison of S wave splitting results in the two earthquake sequences show that the polarization direction in M=6.2earthquake sequence is more scattered and its average fast direction is 20° larger than that of M=6.1 sequence, and zation direction may be due to the stress disturbance imposed by the M=6.2 and the M=6.1 mainshocks on regional background stress field.

  5. San Andreas Fault, California, M 5.5 or greater Earthquakes 1800-2000

    Science.gov (United States)

    Toppozada, T.; Branum, D.; Reichle, M.; Hallstrom, C.

    2001-12-01

    The San Andreas fault has been the most significant source of major California earthquakes since 1800. From 1812 to 1906 it generated four major earthquakes of M 7.2 or greater in two pairs on two major regions of the fault. A pair of major earthquakes occurred on the Central to Southern region, where the 1857 faulting overlapped the 1812 earthquake faulting. And a pair of major earthquakes occurred on the Northern region, where the 1906 faulting overlapped the 1838 earthquake faulting. The 1812 earthquake resulted from a rupture of up to about 200 km, from the region of Cajon Pass to as far as about 50 km west of Fort Tejon (Sieh and others, 1989). This rupture is the probable source of both the destructive 1812.12.8 "San Juan Capistrano" and the 1812.12.21 "Santa Barbara Channel" earthquakes. The 1838 earthquake's damage effects throughout the Bay area, from San Francisco to Santa Clara Valley and Monterey, were unequalled by any Bay area earthquake other than the 1906 event. The mainshock's effects, and numerous strong probable aftershocks in the San Juan Bautista vicinity in the following three years, suggest 1838 faulting from San Francisco to San Juan Bautista, and M about 7.4. The 630 km length of the San Andreas fault between San Francisco and Cajon Pass ruptured in the 1838 and 1857 earthquakes, except for about 75 km between Bitterwater and San Juan Bautista. The 1840-1841 probable aftershocks of the 1838 event occurred near San Juan Bautista, and the foreshocks and aftershocks of the 1857 event occurred near Bitterwater. In the Bitterwater area, strong earthquakes continued to occur until the 1885 earthquake of M 6.5. Near Parkfield, 40 to 70 km southeast of Bitterwater, M 5.5 or greater earthquakes have occurred from the 1870s to the 1960s. In the total Bitterwater to Parkfield zone bracketing the northern end of the 1857 rupture, the seismicity and moment release has decreased steadily since 1857, and has tended to migrate southeastward with time. The

  6. VizieR Online Data Catalog: PACS Evolutionary Probe (PEP-DR1) catalogs (Lutz+, 2011)

    Science.gov (United States)

    Lutz, D.; Poglitsch, A.; Altieri, B.; Andreani, P.; Aussel, H.; Berta, S.; Bongiovanni, A.; Brisbin, D.; Cava, A.; Cepa, J.; Cimatti, A.; Daddi, E.; Dominguez-Sanchez, H.; Elbaz, D.; Foerster Schreiber, N. M.; Genzel, R.; Grazian, A.; Gruppioni, C.; Harwit, M.; Le Floc'h, E.; Magdis, G.; Magnelli, B.; Maiolino, R.; Nordon, R.; Perez Garcia, A. M.; Popesso, P.; Pozzi, F.; Riguccini, L.; Rodighiero, G.; Saintonge, A.; Sanchez Portal, M.; Santini, P.; Shao, L.; Sturm, E.; Tacconi, L. J.; Valtchanov, I.; Wetzstein, M.; Wieprecht, E.

    2013-11-01

    PACS catalogs built by the PEP team, with key contributions by Stefano Berta, Benjamin Magnelli, Paola Popesso, Dieter Lutz, Francesca Pozzi, Bruno Altieri, Herve Aussel, Hoseong Hwang, Emeric Le Floc'h, Georgios Magdis, Raanan Nordon, Albrecht Poglitsch, Laurie Riguccini, Amelie Saintonge, Li Shao. For more details, please refer to Lutz et al. (2011A&A...532A..90L) and to the PDF documentation associated to the release. Data and catalogs can be retrieved from the web page http://www.mpe.mpg.de/ir/Research/PEP/publicdatareleases.php See the PDF documentation associated to the PEP DR1 release, http://www.mpe.mpg.de/resources/PEP/DR1tarballs/readmePEP_global.pdf and http://www.mpe.mpg.de/resources/PEP/DR1tarballs/readmePEP_SPIRE.pdf for more details. (69 data files).

  7. PEP Support Laboratory Leaching and Permeate Stability Tests

    Energy Technology Data Exchange (ETDEWEB)

    Russell, Renee L.; Peterson, Reid A.; Rinehart, Donald E.; Buchmiller, William C.

    2009-09-25

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed, and operated as part of a plan to respond to issue M12, "Undemonstrated Leaching Processes," of the External Flowsheet Review Team (EFRT) issue response plan.( ) The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. A simplified flow diagram of the PEP system is shown in Figure 1.1. Two operating scenarios are currently being evaluated for the ultrafiltration process (UFP) and leaching operations. The first scenario has caustic leaching performed in the UFP-2 ultrafiltration feed vessels (i.e., vessel UFP-VSL-T02A in the PEP and vessels UFP-VSL-00002A and B in the WTP PTF). The second scenario has caustic leaching conducted in the UFP-1 ultrafiltration feed preparation vessels (i.e., vessels UFP-VSL-T01A and B in the PEP and vessels UFP-VSL-00001A and B in the WTP PTF). In both scenarios, 19-M sodium hydroxide solution (NaOH, caustic) is added to the waste slurry in the vessels to leach solid aluminum compounds (e.g., gibbsite, boehmite). Caustic addition is followed by a heating step that uses direct injection of steam to accelerate the leach process. Following the caustic leach, the vessel contents are cooled using vessel cooling jackets and/or external heat exchangers. The main difference between the two scenarios is that for leaching in UFP-VSL-T01A and B, the 19-M NaOH is added to un-concentrated waste slurry (3 to 8 wt% solids), while for leaching in

  8. PEP Run Report for Simulant Shakedown/Functional Testing

    Energy Technology Data Exchange (ETDEWEB)

    Josephson, Gary B.; Geeting, John GH; Bredt, Ofelia P.; Burns, Carolyn A.; Golovich, Elizabeth C.; Guzman-Leong, Consuelo E.; Kurath, Dean E.; Sevigny, Gary J.

    2009-12-29

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Waste Treatment Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed, and operated as part of a plan to respond to issue M12, "Undemonstrated Leaching Processes." The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing. Two operating scenarios are currently being evaluated for the ultrafiltration process (UFP) and leaching operations. The first scenario has caustic leaching performed in the UFP-2 ultrafiltration feed vessels (i.e., vessel UFP-VSL-T02A in the PEP; and vessels UFP-VSL-00002A and B in the WTP PTF). The second scenario has caustic leaching conducted in the UFP-1 ultrafiltration feed preparation vessels (i.e., vessels UFP-VSL-T01A and B in the PEP; vessels UFP-VSL-00001A and B in the WTP PTF). In both scenarios, 19-M sodium hydroxide solution (NaOH, caustic) is added to the waste slurry in the vessels to leach solid aluminum compounds (e.g., gibbsite, boehmite). Caustic addition is followed by a heating step that uses direct injection of steam to accelerate the leach process. Following the caustic leach, the vessel contents are cooled using vessel cooling jackets and/or external heat exchangers. The main difference between the two scenarios is that for leaching in UFP-1, the 19-M NaOH is added to un-concentrated waste slurry (3-8 wt% solids), while for leaching in UFP-2, the slurry is concentrated to nominally 20 wt% solids using cross-flow ultrafiltration

  9. Coseismic and postseismic deformation due to the 2007 M5.5 Ghazaband fault earthquake, Balochistan, Pakistan

    Science.gov (United States)

    Fattahi, H.; Amelung, F.; Chaussard, E.; Wdowinski, S.

    2015-05-01

    Time series analysis of interferometric synthetic aperture radar data reveals coseismic and postseismic surface displacements associated with the 2007 M5.5 earthquake along the southern Ghazaband fault, a major but little studied fault in Pakistan. Modeling indicates that the coseismic surface deformation was caused by ~9 cm of strike-slip displacement along a shallow subvertical fault. The earthquake was followed by at least 1 year of afterslip, releasing ~70% of the moment of the main event, equivalent to a M5.4 earthquake. This high aseismic relative to the seismic moment release is consistent with previous observations for moderate earthquakes (M < 6) and suggests that smaller earthquakes are associated with a higher aseismic relative to seismic moment release than larger earthquakes.

  10. A Massive Neutron Star in the Globular Cluster M5

    CERN Document Server

    Freire, Paulo C C; Berg, Maureen van den; Hessels, Jason W T

    2007-01-01

    We report the results of 18 years of Arecibo timing of two pulsars in the globular cluster NGC 5904 (M5), PSR B1516+02A and PSR B1516+02B. This has allowed the measurement of the proper motions of these pulsars and of the cluster. PSR B1516+02B is a 7.95-ms pulsar in a binary system with a ~0.2 solar-mass companion and an orbital period of 6.86 days. In deep HST images, no optical counterpart is detected at the position of the pulsar, implying the companion is either a white dwarf or a low-mass MS star. The eccentricity of the orbit (e = 0.14) has allowed a measurement of the rate of advance of periastron: 0.0136 +/ 0.0007 degrees per year. It is very likely that the periastron advance is due to the effects of general relativity; the total mass of the binary system is then 2.14 +/- 0.16 solar masses. The small measured mass function implies, in a statistical sense, that a very large fraction of this total mass is contained in the pulsar: 1.94 +0.17/-0.19 solar masses (1 sigma$); there is a 5 % probability tha...

  11. Supersymmetric M5 brane theories on R × CP2

    Science.gov (United States)

    Kim, Hee-Cheol; Lee, Kimyeong

    2013-07-01

    We propose 4 and 12 supersymmetric conformal Yang-Mills-Chern-Simons theories on R × CP2 as multiple representations of the theory on M5 branes. These theories are obtained by twisted Zk modding and dimensional reduction of the 6d (2,0) superconformal field theory on R × S5 and have a discrete coupling constant 1/{g_{{YM}^2}}=k/{4{π^2}} with natural number k. Instantons in these theories are expected to represent the Kaluza-Klein modes. For the k = 1 , 2 cases, we argue that the number of supersymmetries in our theories should be enhanced to 32 and 16, respectively. For the k = 3 case, only the 4 supersymmetric theory gets the supersymmetric enhancement to 8. For the 4 supersymmetric case, the vacuum structure becomes more complicated as there are degenerate supersymmetric vacua characterized by fuzzy spheres. We calculate the perturbative part of the SU( N ) gauge group Euclidean path integral for the index function at the symmetric phase of the 4 supersymmetric case and confirm it with the known half-BPS index. From the similar twisted Z k modding of the AdS7 × S4 geometry, we speculate that the M region is for k ≲ N 1/3 and the type IIA region is N 1/3 ≲ k ≲ N. When nonperturbative corrections are included, our theories are expected to produce the full index of the 6d (2,0) theory.

  12. A Cross-Layer PEP for DVB-RCS Networks

    Science.gov (United States)

    Giambene, Giovanni; Hadzic, Snezana

    The aim of this paper is to consider the problems of TCP performance in broadband GEO satellite networks and to propose a cross-layer approach for a transport-layer PEP that makes spoofing actions on ACKs to modify them in case the satellite network is congested. This approach is investigated here from the signaling standpoint with a special attention to the BSM reference model and considering a specific GEO satellite network architecture based on the DVB-S2/-RCS standards. The proposed PEP can prevent congestion in the satellite network, thus allowing a better TCP performance. This work has been carried out within the framework of the EU SatNEx II FP6 Network of Excellence.

  13. Hazard Analysis for the Pretreatment Engineering Platform (PEP)

    Energy Technology Data Exchange (ETDEWEB)

    Sullivan, Robin S.; Geeting, John GH; Lawrence, Wesley E.; Young, Jonathan

    2008-07-10

    The Pretreatment Engineering Platform (PEP) is designed to perform a demonstration on an engineering scale to confirm the Hanford Waste Treatment Plant Pretreatment Facility (PTF) leaching and filtration process equipment design and sludge treatment process. The system will use scaled prototypic equipment to demonstrate sludge water wash, caustic leaching, oxidative leaching, and filtration. Unit operations to be tested include pumping, solids washing, chemical reagent addition and blending, heating, cooling, leaching, filtration, and filter cleaning. In addition, the PEP will evaluate potential design changes to the ultrafiltration process system equipment to potentially enhance leaching and filtration performance as well as overall pretreatment throughput. The skid-mounted system will be installed and operated in the Processing Development Laboratory-West at Pacific Northwest National Laboratory (PNNL) in Richland, Washington.

  14. Network Upgrade for the SLC: PEP II Network

    Energy Technology Data Exchange (ETDEWEB)

    Crane, M.; Call, M.; Clark, S.; Coffman, F.; Himel, T.; Lahey, T.; Miller, E.; Sass, R.; /SLAC

    2011-09-09

    The PEP-II control system required a new network to support the system functions. This network, called CTLnet, is an FDDI/Ethernet based network using only TCP/IP protocols. An upgrade of the SLC Control System micro communications to use TCP/IP and SLCNET would allow all PEP-II control system nodes to use TCP/IP. CTLnet is private and separate from the SLAC public network. Access to nodes and control system functions is provided by multi-homed application servers with connections to both the private CTLnet and the SLAC public network. Monitoring and diagnostics are provided using a dedicated system. Future plans and current status information is included.

  15. Lessons Learned from PEP-II LLRF and Longitudinal Feedback

    Energy Technology Data Exchange (ETDEWEB)

    Fox, J.D.; Mastorides, T.; Rivetta, C.H.; Van Winkle, D.; /SLAC; Teytelman, D.; /Dimtel, Redwood City

    2010-08-26

    The PEP-II B-Factory collider ended the final phase of operation at nearly twice the design current and 4X the design luminosity. To highlight the evolution from the original conceptual design through to the 1.2E34 final machine we choose one example each from the broadband feedback and from the LLRF system. They illustrate the original design estimation missed some very significant details, and how in the course of PEP-II operation unexpected difficulties led to significant insights and new approaches which allowed higher machine performance. We present valuable 'lessons learned' which are of interest to designers of next generation feedback and impedance controlled LLRF systems.

  16. Beam-Ion Instability in PEP-II

    Energy Technology Data Exchange (ETDEWEB)

    Heifets, S.; Kulikov, A.; Wang, Min-Huey; Wienands, U.; /SLAC

    2007-11-07

    The instability in the PEP-II electron ring has been observed while reducing the clearing gap in the bunch train. We study the ion effects in the ring summarizing existing theories of the beam-ion interaction, comparing them with observations, and estimating effect on luminosity in the saturation regime. Considering the gap instability we suggest that the instability is triggered by the beam-ion instability, and discuss other mechanisms pertinent to the instability.

  17. Proceedings of the First International Conference on PEP005.

    Science.gov (United States)

    Ogbourne, Steven M; Hampson, Peter; Lord, Janet M; Parsons, Peter; De Witte, Peter A; Suhrbier, Andreas

    2007-03-01

    The sap of Euphorbia peplus, commonly know as 'petty spurge', 'radium weed' or 'milkweed' has been used for centuries as a traditional treatment for skin conditions, including warts, corns and cancers of the skin. Documentation of its use by medical professionals to treat basal cell carcinoma (BCC) dates from the early 19 century. Individuals who participated in a 1988 survey of home treatments for cancer indicated the sap of E. peplus was an effective cure for actinic lesions leading the investigators to suggest that this potential utility should be further explored in controlled clinical trials. The fractionation of the sap E. peplus using solvents of varying polarity yielded several macrocyclic diterpenes, many of which were found to have cytotoxic activity or the ability to influence cellular differentiation. Ultimately, ingenol 3-angelate (I3A) of PEP005, emerged as a promising potential new anti-cancer treatment. Here we report the proceedings from the First International Conference on PEP005, covering the exciting potential of PEP005 as the therapeutic agent for the treatment of skin cancer, leukemia and bladder cancer.

  18. Tripeptidase Gene (pepT) of Lactococcus lactis : Molecular Cloning and Nucleotide Sequencing of pepT and Construction of a Chromosomal Deletion Mutant

    NARCIS (Netherlands)

    Mierau, Igor; Haandrikman, Alfred J.; Velterop, Odilia; Tan, Paris S.T.; Leenhouts, Kees L.; Konings, Wilhelmus; Venema, Gerhardus; Kok, Jan

    1994-01-01

    The gene encoding a tripeptidase (pepT) of lactococcus lactis subsp. cremoris (formerly subsp. lactis) MG1363 was cloned from a genomic library in pUC19 and subsequently sequenced. The tripeptidase of L. lactis was shown to be homologous to PepT of Salmonella typhimurium with 47.4% identity in the d

  19. Holographic cosmology from a system of M2–M5 branes

    Energy Technology Data Exchange (ETDEWEB)

    Sepehri, Alireza, E-mail: alireza.sepehri@uk.ac.ir [Faculty of Physics, Shahid Bahonar University, P.O. Box 76175, Kerman (Iran, Islamic Republic of); Research Institute for Astronomy and Astrophysics of Maragha (RIAAM), Maragha (Iran, Islamic Republic of); Faizal, Mir, E-mail: f2mir@uwaterloo.ca [Department of Physics and Astronomy, University of Waterloo, Waterloo, ON, N2L 3G1 (Canada); Setare, Mohammad Reza, E-mail: rezakord@ipm.ir [Department of Science, Campus of Bijar, University of Kurdistan, Bijar (Iran, Islamic Republic of); Ali, Ahmed Farag, E-mail: afali@fsu.edu [Department of Physics, Florida State University, Tallahassee, FL 32306 (United States); Department of Physics, Faculty of Science, Benha University, Benha 13518 (Egypt)

    2016-05-15

    In this paper, we analyze the holographic cosmology using a M2–M5 brane configuration. In this configuration, a M2-brane will be placed in between a M5-brane and an anti-M5-brane. The M2-brane will act as a channel for energy to flow from an anti-M5-brane to a M5-brane, and this will increase the degrees of freedom on the M5-brane causing inflation. The inflation will end when the M5-brane and anti-M5-brane get separated. However, at a later stage the distance between the M5-brane and the anti-M5-bran can reduce and this will cause the formation of tachyonic states. These tachyonic states will again open a bridge between the M5-branes and the anti-M5-branes, which will cause further acceleration of the universe.

  20. Holographic cosmology from a system of M2-M5 branes

    Science.gov (United States)

    Sepehri, Alireza; Faizal, Mir; Setare, Mohammad Reza; Ali, Ahmed Farag

    2016-05-01

    In this paper, we analyze the holographic cosmology using a M2-M5 brane configuration. In this configuration, a M2-brane will be placed in between a M5-brane and an anti-M5-brane. The M2-brane will act as a channel for energy to flow from an anti-M5-brane to a M5-brane, and this will increase the degrees of freedom on the M5-brane causing inflation. The inflation will end when the M5-brane and anti-M5-brane get separated. However, at a later stage the distance between the M5-brane and the anti-M5-bran can reduce and this will cause the formation of tachyonic states. These tachyonic states will again open a bridge between the M5-branes and the anti-M5-branes, which will cause further acceleration of the universe.

  1. Phylogenetic analysis of Lactococcus lactis subspecies based on decoding the sequence of the pepT tripeptidase gene, the pepV dipeptidase gene and 16S rRNA.

    Science.gov (United States)

    Mori, Sumiko; Mori, Katsumi; Suzuki, Ichirou; Kasumi, Takafumi

    2004-08-01

    Tripeptidase (PepT) and dipeptidase (PepV), the enzymes located in the final stage of the intracellular proteolytic system, were demonstrated to be distributed widely in lactic acid bacteria, especially in lactococci. Both the tripeptidase genes (pepT) and dipeptidase genes (pepV) of 15 lactococcal strains consisting of the type and domestic strains were cloned and sequenced using normal and TAIL PCR methods. Amino acid sequences of these enzymes were highly conserved among strains. Evolutionary distance trees based on the sequence of 1239 nucleotides of pepT and 1416 nucleotide of pepV showed a similar cluster as that obtained from the 1499 fragment of the 16S rRNA. Based on this profile, the species Lactococcus lactis is reasonably divided into three subspecies groups, subsp. lactis, cremoris, and hordniae, as in the current classification. Figure of trees from pepT and pepV were essentially identical to each other and slightly more intricate than that from 16S rRNA. The K nuc values obtained from pepT and pepV genes were approximately ten times as high as that from 16S rRNA. Considering these results, phylogenetic analysis based on pepT and pepV genes may aid in a more precise index of classification of L. lactis subspecies. PepT and PepV seem to have evolved in similar directions in lactococci.

  2. The Ustilago maydis effector Pep1 suppresses plant immunity by inhibition of host peroxidase activity.

    Directory of Open Access Journals (Sweden)

    Christoph Hemetsberger

    Full Text Available The corn smut Ustilago maydis establishes a biotrophic interaction with its host plant maize. This interaction requires efficient suppression of plant immune responses, which is attributed to secreted effector proteins. Previously we identified Pep1 (Protein essential during penetration-1 as a secreted effector with an essential role for U. maydis virulence. pep1 deletion mutants induce strong defense responses leading to an early block in pathogenic development of the fungus. Using cytological and functional assays we show that Pep1 functions as an inhibitor of plant peroxidases. At sites of Δpep1 mutant penetrations, H₂O₂ strongly accumulated in the cell walls, coinciding with a transcriptional induction of the secreted maize peroxidase POX12. Pep1 protein effectively inhibited the peroxidase driven oxidative burst and thereby suppresses the early immune responses of maize. Moreover, Pep1 directly inhibits peroxidases in vitro in a concentration-dependent manner. Using fluorescence complementation assays, we observed a direct interaction of Pep1 and the maize peroxidase POX12 in vivo. Functional relevance of this interaction was demonstrated by partial complementation of the Δpep1 mutant defect by virus induced gene silencing of maize POX12. We conclude that Pep1 acts as a potent suppressor of early plant defenses by inhibition of peroxidase activity. Thus, it represents a novel strategy for establishing a biotrophic interaction.

  3. The Ustilago maydis effector Pep1 suppresses plant immunity by inhibition of host peroxidase activity.

    Science.gov (United States)

    Hemetsberger, Christoph; Herrberger, Christian; Zechmann, Bernd; Hillmer, Morten; Doehlemann, Gunther

    2012-01-01

    The corn smut Ustilago maydis establishes a biotrophic interaction with its host plant maize. This interaction requires efficient suppression of plant immune responses, which is attributed to secreted effector proteins. Previously we identified Pep1 (Protein essential during penetration-1) as a secreted effector with an essential role for U. maydis virulence. pep1 deletion mutants induce strong defense responses leading to an early block in pathogenic development of the fungus. Using cytological and functional assays we show that Pep1 functions as an inhibitor of plant peroxidases. At sites of Δpep1 mutant penetrations, H₂O₂ strongly accumulated in the cell walls, coinciding with a transcriptional induction of the secreted maize peroxidase POX12. Pep1 protein effectively inhibited the peroxidase driven oxidative burst and thereby suppresses the early immune responses of maize. Moreover, Pep1 directly inhibits peroxidases in vitro in a concentration-dependent manner. Using fluorescence complementation assays, we observed a direct interaction of Pep1 and the maize peroxidase POX12 in vivo. Functional relevance of this interaction was demonstrated by partial complementation of the Δpep1 mutant defect by virus induced gene silencing of maize POX12. We conclude that Pep1 acts as a potent suppressor of early plant defenses by inhibition of peroxidase activity. Thus, it represents a novel strategy for establishing a biotrophic interaction.

  4. Imipramine enhances neuroprotective effect of PEP-1-Catalase against ischemic neuronal damage.

    Science.gov (United States)

    Kim, Dae Won; Kim, Duk-Soo; Kim, Mi Jin; Kwon, Soon Won; Ahn, Eun Hee; Jeong, Hoon Jae; Sohn, Eun Jeong; Dutta, Suman; Lim, Soon Sung; Cho, Sung-Woo; Lee, Kil Soo; Park, Jinseu; Eum, Won Sik; Hwang, Hyun Sook; Choi, Soo Young

    2011-10-01

    The protein transduction domains have been reported to have potential to deliver the exogenous molecules, including proteins, to living cells. However, poor transduction of proteins limits therapeutic application. In this study, we examined whether imipramine could stimulate the transduction efficiency of PEP-1 fused proteins into astrocytes. PEP-1-catalase (PEP-1- CAT) was transduced into astrocytes in a time- and dose-dependent manner, reducing cellular toxicity induced by H(2)O(2). Additionally, the group of PEP-1-CAT (+) imipramine showed enhancement of transduction efficiency and therefore increased cellular viability than that of PEP-1-CAT alone. In the gerbil ischemia models, PEP-1-CAT displayed significant neuroprotection in the CA1 region of the hippocampus. Interestingly, PEP-1-CAT (+) imipramine prevented neuronal cell death and lipid peroxidation more markedly than PEP-1-CAT alone. Therefore, our results suggest that imipramine can be used as a drug to enhance the transduction of PEP-1 fusion proteins to cells or animals and their efficacies against various disorders.

  5. Impedance of the PEP-II DIP screen

    Energy Technology Data Exchange (ETDEWEB)

    Ng, C.-K. [Stanford Linear Accelerator Center, Menlo Park, CA (United States); Weiland, T.

    1996-08-01

    The vacuum chamber of a storage ring normally consists of periodically spaced pumping slots. The longitudinal impedance of slots are analyzed in this paper. It is found that although the broad-band impedance is tolerable, the narrow-band impedance, as a consequence of the periodicity of the slots, may exceed the stability limit given by natural damping with no feedback system on. Based on this analysis, the PEP-II distributed-ion-pump (DIP) screen uses long grooves with hidden holes cut halfway to reduce both the broad-band and narrow-band impedances. (author)

  6. Numerical simulation of the PEP-II beam position monitor

    Energy Technology Data Exchange (ETDEWEB)

    Kurita, N.; Martin, D.; Ng, C.-K.; Smith, S. [Stanford Linear Accelerator Center, Menlo Park, CA (United States); Weiland, T.

    1996-08-01

    We use MAFIA to analyze the PEP-II button-type beam position monitor (BPM). Employing proper termination of the BPM into a coaxial cable, the output signal at the BPM is determined. Thus the issues of signal sensitivity and power output can be addressed quantitatively, including all transient effects and wakefields. Besides this first quantitative analysis of a true BPM 3D structure, we find that internal resonant modes are a major source of high value narrow-band impedances. The effects of these resonances on coupled-bunch instabilities are discussed. An estimate of the power dissipation in the ceramic vacuum seal under high current operation is given. (author)

  7. A proposed orbit and vertical dispersion correction system for PEP

    Energy Technology Data Exchange (ETDEWEB)

    Close, E.; Cornacchia, M.; King, A.S.; Lee, M.J.

    1978-07-01

    The proposed arrangement of position monitors and dipole magnets for the closed orbit correction system in PEP is described. The computer code ALIGN, which simulates and corrects closed orbit displacements, has been used to study the most effective layout of monitors and correctors. The vertical dispersion function has been computed before and after closed orbit correction. The results indicate that the residual vertical dispersion after the orbit is corrected could exceed the tolerable values. A correction procedure for the vertical dispersion has been studied with the compute code CO-OP and this scheme of correction has been verified experimentally in SPEAR. 9 refs., 8 figs., 2 tabs.

  8. Status of PEP-X Light Source Design Study

    Energy Technology Data Exchange (ETDEWEB)

    Bane, K.L.F.; Bertsche, K.J.; Cai, Y.; Chao, A.; Huang, X.; Jiao, Y.; Ng, C.-K.; Nosochkov, Y.; Novokhatski, A.; Rivetta, C.H.; Safranek, J.A.; Stupakov, G.V.; Wang, L.; Wang, M.-H.; Xiao, L.; /SLAC; Hettel, R.O.; /SLAC; Rabedeau, T.; /SLAC

    2011-12-14

    The SLAC Beam Physics group and other SLAC collaborators continue to study options for implementing a near diffraction-limited ring-based light source in the 2.2-km PEP-II tunnel that will serve the SSRL scientific program in the future. The study team has completed the baseline design for a 4.5-GeV storage ring having 160 pm-rad emittance with stored beam current of 1.5 A, providing >10{sup 22} brightness for multi-keV photon beams from 3.5-m undulator sources. The team has also investigated possible 5-GeV ERL configurations which, similar to the Cornell and KEK ERL plans, would have {approx}30 pm-rad emittance with 100 mA current, and {approx}10 pm-rad emittance with 25 mA or less. Now a 4.5-GeV 'ultimate' storage ring having emittance similar to the ERL and operating with {approx}200 mA is under study. An overview of the progress of the PEP-X design study and SSRL's plans for defining performance parameters that will guide the choice of ring options is presented.

  9. An Orbit And Dispersion Correction Scheme for the PEP II

    Energy Technology Data Exchange (ETDEWEB)

    Cai, Y.; Donald, M.; Shoaee, H.; White, G.; Yasukawa, L.A.; /SLAC

    2011-09-01

    To achieve optimum luminosity in a storage ring it is vital to control the residual vertical dispersion. In the original PEP storage ring, a scheme to control the residual dispersion function was implemented using the ring orbit as the controlling element. The 'best' orbit not necessarily giving the lowest vertical dispersion. A similar scheme has been implemented in both the on-line control code and in the simulation code LEGO. The method involves finding the response matrices (sensitivity of orbit/dispersion at each Beam-Position-Monitor (BPM) to each orbit corrector) and solving in a least squares sense for minimum orbit, dispersion function or both. The optimum solution is usually a subset of the full least squares solution. A scheme of simultaneously correcting the orbits and dispersion has been implemented in the simulation code and on-line control system for PEP-II. The scheme is based on the eigenvector decomposition method. An important ingredient of the scheme is to choose the optimum eigenvectors that minimize the orbit, dispersion and corrector strength. Simulations indicate this to be a very effective way to control the vertical residual dispersion.

  10. Single Bunch Stability in LER of PEP II

    Energy Technology Data Exchange (ETDEWEB)

    Heifets, S.; /SLAC; Sabbi, G.; /Fermilab

    2011-10-11

    The note describes results of studies of the single bunch stability in the low energy ring (LER) of the PEP-II B-factory. Simulations describe the potential well distortion (PWD) obtained by numerical solution of the Haiisinski equation and results on the beam stability obtained with the code TRISIM. Both longitudinal and transverse wake fields are taken into account. Preliminary estimates indicate that single bunch in the LER of the PEP-II B-factory has to be stable, both longitudinally and transversely, at the maximum design bunch current 1.8 mA (beam current 3A). However, realistic wakes of the machine has been constructed only recently using results of the extensive numerical simulations of the vacuum components of the ring. Additional to that, the code TRISIM, a simulation program for single-bunch collective effects written by one of the authors (G. S.), became recently available. This allows us to study beam stability in a more reliable way than it is possible analytically.

  11. Power Extension Package (PEP) system definition extension, orbital service module systems analysis study. Volume 9: PEP design, development and test plans

    Science.gov (United States)

    1979-01-01

    A plan for the production of two PEP flight systems is defined. The task's milestones are described. Provisions for the development and assembly of new ground support equipment required for both testing and launch operations are included.

  12. Lattice design and optimization for the PEP-X ultra low emittance storage ring at SLAC

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Min-Huey; Nosochkov, Yuri; Bane, Karl; Cai, Yunhai; Hettel, Robert; Huang, Xiaobiao; /SLAC

    2011-08-12

    SLAC is developing a long-range plan to transfer the evolving scientific programs at SSRL from the SPEAR3 light source to a much higher performing photon source. One of the possibilities is a new PEP-X 4.5 GeV storage ring that would be housed in the 2.2 km PEP-II tunnel. The PEP-X is designed to produce photon beams having brightness near 10{sup 22} (ph/s/mm{sup 2}/mrad{sup 2}/0.1% BW) at 10 keV with 3.5 m undulator at beam current of 1.5 A. This report presents an overview of the PEP-X baseline lattice design and describes the lattice optimization procedures in order to maximize the beam dynamic aperture. The complete report of PEP-X baseline design is published in SLAC report.

  13. Effects of pergolide mesylate on transduction efficiency of PEP-1-catalase protein

    Energy Technology Data Exchange (ETDEWEB)

    Sohn, Eun Jeong; Kim, Dae Won; Kim, Young Nam; Kim, So Mi [Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702 (Korea, Republic of); Lim, Soon Sung [Department of Food Science and Nutrition and RIC Center, Hallym University, Chunchon 200-702 (Korea, Republic of); Kang, Tae-Cheon [Department of Anatomy and Neurobiology, College of Medicine, Hallym University, Chunchon 200-702 (Korea, Republic of); Kwon, Hyeok Yil [Department of Physiology, College of Medicine, Hallym University, Chunchon 200-702 (Korea, Republic of); Kim, Duk-Soo [Department of Anatomy, College of Medicine, Soonchunhyang University, Cheonan-Si 330-090 (Korea, Republic of); Cho, Sung-Woo [Department of Biochemistry and Molecular Biology, University of Ulsan College of Medicine, Seoul 138-736 (Korea, Republic of); Han, Kyu Hyung; Park, Jinseu; Eum, Won Sik [Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702 (Korea, Republic of); Hwang, Hyun Sook, E-mail: wazzup@hallym.ac.kr [Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702 (Korea, Republic of); Choi, Soo Young, E-mail: sychoi@hallym.ac.kr [Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702 (Korea, Republic of)

    2011-03-18

    Research highlights: {yields} We studied effects of pergolide mesylate (PM) on in vitro and in vivo transduction of PEP-1-catalase. {yields} PEP-1-catatase inhibited 12-O-tetradecanoylphorbol-13-acetate (TPA)-induced inflammation. {yields} PM enhanced the transduction of PEP-1-catalase into HaCaT cells and skin tissue. {yields} PM increased anti-inflammatory activity of PEP-1-catalase. {yields} PM stimulated therapeutic action of anti-oxidant enzyme catalase in oxidative-related diseases. -- Abstract: The low transduction efficiency of various proteins is an obstacle to their therapeutic application. However, protein transduction domains (PTDs) are well-known for a highly effective tool for exogenous protein delivery to cells. We examined the effects of pergolide mesylate (PM) on the transduction of PEP-1-catalase into HaCaT human keratinocytes and mice skin and on the anti-inflammatory activity of PEP-1-catatase against 12-O-tetradecanoylphorbol-13-acetate (TPA)-induced inflammation using Western blot and histological analysis. PM enhanced the time- and dose-dependent transduction of PEP-1-catalase into HaCaT cells without affecting the cellular toxicity. In a mouse edema model, PEP-1-catalase inhibited the increased expressions of inflammatory mediators and cytokines such as cyclooxygenase-2, inducible nitric oxide synthase, interleukin-6 and -1{beta}, and tumor necrosis factor-{alpha} induced by TPA. On the other hand, PM alone failed to exert any significant anti-inflammatory effects. However, the anti-inflammatory effect of co-treatment with PEP-1-catalase and PM was more potent than that of PEP-1-catalase alone. Our results indicate that PM may enhance the delivery of PTDs fusion therapeutic proteins to target cells and tissues and has potential to increase their therapeutic effects of such drugs against various diseases.

  14. Evolutionary divergence of the plant elicitor peptides (Peps) and their receptors: interfamily incompatibility of perception but compatibility of downstream signalling

    KAUST Repository

    Lori, M.

    2015-05-22

    Plant elicitor peptides (Peps) are potent inducers of pattern-triggered immunity and amplify the immune response against diverse pathogens. Peps have been discovered and studied extensively in Arabidopsis and only recently orthologs in maize were also identified and characterized in more detail. Here, the presence of PROPEPs, the Pep precursors, and PEPRs, the Pep receptors, was investigated within the plant kingdom. PROPEPs and PEPRs were identified in most sequenced species of the angiosperms. The conservation and compatibility of the Pep-PEPR-system was analysed by using plants of two distantly related dicot families, Brassicaceae and Solanaceae, and a representative family of monocot plants, the Poaceae. All three plant families contain important crop plants, including maize, rice, tomato, potato, and canola. Peps were not recognized by species outside of their plant family of origin, apparently because of a divergence of the Pep sequences. Three family-specific Pep motifs were defined and the integration of such a motif into the Pep sequence of an unrelated Pep enabled its perception. Transient transformation of Nicotiana benthamiana with the coding sequences of the AtPEPR1 and ZmPEPR1a led to the recognition of Pep peptides of Brassicaceae or Poaceae origin, respectively, and to the proper activation of downstream signalling. It was concluded that signalling machinery downstream of the PEPRs is highly conserved whereas the leucine-rich repeat domains of the PEPRs co-evolved with the Peps, leading to distinct motifs and, with it, interfamily incompatibility.

  15. PepGMV Rep-Protein Expression in Mammalian Cells

    Science.gov (United States)

    Chapa-Oliver, Angela María; Mejía-Teniente, Laura; García-Gasca, Teresa; Guevara-Gonzalez, Ramon Gerardo; Torres-Pacheco, Irineo

    2012-01-01

    The Geminiviruses genome is a small, single strand DNA that replicates in the plant cell nucleus. Analogous to animal DNA viruses, Geminiviruses depend on the host replication machinery to amplify their genomes and only supply the factors required to initiate their replication. Consequently, Geminiviruses remove the cell-cycle arrest and induce the host replication machinery using an endocycle process. They encode proteins, such as the conserved replication-associated proteins (Rep) that interact with retinoblastoma-like proteins in plants and alter the cell division cycle in yeasts. Therefore, the aim of this work is to analyze the impact of Pepper Golden Mosaic Virus (PepGMV) Rep protein in mammalian cells. Results indicate that the pTracer-SV40:Rep construction obtained in this work can be used to analyze the Rep protein effect in mammalian cells in order to compare the cell cycle regulation mechanisms in plants and animals. PMID:23170183

  16. PEP-II Large Power Supplies Rebuild Program at SLAC

    Energy Technology Data Exchange (ETDEWEB)

    Bellomo, P.; Lipari, J.J.; de Lira, A.C.; Rafael, F.S.; /SLAC

    2005-05-17

    Seven large power supplies (LGPS) with output ratings from 72kW to 270kW power PEP-II quad magnets in the electron-positron collider region. These supplies have posed serious maintenance and reliability problems since they were installed in 1997, resulting in loss of accelerator availability. A redesign/rebuild program was undertaken by the SLAC Power Conversion Department. During the 2004 summer shutdown all the control circuits in these supplies were redesigned and replaced. A new PWM control board, programmable logic controller, and touch panel have been installed to improve LGPS reliability, and to make troubleshooting easier. In this paper we present the details of this rebuilding program and results.

  17. Beam Comissioning of the PEP-II High Energy Ring

    Energy Technology Data Exchange (ETDEWEB)

    Wienands, U.; Anderson, S.; Assmann, R.; Bharadwaj, V.; Cai, Y.; Clendenin, J.; Corredoura, P.; Decker, F.J.; Donald, M.; Ecklund, S.; Emma, P.; Erickson, R.; Fox, J.; Fieguth, T.; Fisher, A.; Heifets,, S.; Hill, A.; Himel, T.; Iverson, R.; Johnson, R.; Judkins, J.; Krejcik, P.; Kulikov, A.; Lee, M.; Mattison, T.; Minty, M.; Nosochkov, Y.; Phinney, N.; Placidi, M.; Prabhakar, S.; Ross, M.; Smith, S.; Schwarz, H.; Stanek, M.; Teytelman, D.; Traller, R.; Turner, J.; Zimmermann, F.; Barry, W.; Chattopadhyay, S.; Corlett, J.; Decking, W.; Furman, M.; Nishimura, H.; Portmann, G.; Rimmer, R.; Zholents, A.; Zisman, M.; Kozanecki, W.; Hofmann, A.; Zotter, B.; Steier, C.; Bialowons, W.; Lomperski, M.; Lumpkin, A.; Reichel, I.; Safranek, J.; Smith, V.; Tighe, R.; Sullivan, M.; Byrd, J.; Li, D.

    1998-11-12

    The PEP-II High Energy Ring (HER), a 9 GeV electron storage ring, has been in commissioning since spring 1997. Initial beam commissioning activities focused on systems checkout and commissioning and on determining the behavior of the machine systems at high beam currents. This phase culminated with the accumulation of 0.75 A of stored beam-sufficient to achieve design luminosity--in January 1998 after 3.5 months of beam time. Collisions with the 3 GeV positron beam of the Low Energy Ring (LER) were achieved in Summer of 1998. At high beam currents, collective instabilities have been seen. Since then, commissioning activities for the HER have shifted in focus towards characterization of the machine and a rigorous program to understand the machine and the beam dynamics is presently underway.

  18. Simulation of PEP-II Accelerator Backgrounds Using TURTLE

    CERN Document Server

    Barlow, Roger J; Kozanecki, Witold; Majewski, Stephanie; Roudeau, Patrick; Stocchi, Achille

    2005-01-01

    We present studies of accelerator-induced backgrounds in the BaBar detector at the SLAC B-Factory, carried out using a modified version ofthe DECAY TURTLE simulation package. Lost-particle backgrounds in PEP-II are dominated by a combination of beam-gas bremstrahlung, beam-gas Coulomb scattering, radiative-Bhabha events and beam-beam blow-up. The radiation damage and detector occupancy caused by the associated electromagnetic shower debris can limit the usable luminosity. In order to understand and mitigate such backgrounds, we have performed a full programme of beam-gas and luminosity-background simulations, that include the effects of the detector solenoidal field, detailed modelling of limiting apertures in both collider rings, and optimization of the betatron collimation scheme in the presence of large transverse tails.

  19. Dual Power Supplies for PEP-II Injection Kickers

    Energy Technology Data Exchange (ETDEWEB)

    Olszewski, J; Decker, F.-J.; Iverson, R.H.; Kulikov, A.; Pappas, C.; /SLAC

    2005-05-25

    Originally the PEP-II injection kickers were powered by one power supply. Since the kicker magnets where not perfectly matched, the stored beam got excited by about 7% of the maximum kicker amplitude. This led to luminosity losses which were especially obvious for trickle injection when the detector is on for data taking. Therefore two independent power supplies with thyratrons in the tunnel next to the kicker magnet were installed. This also reduces the necessary power by about a factor of four since there are no long cables that have to be charged. The kickers are now independently adjustable to eliminate any non-closure of the kicker system and therefore excitation of the stored beam. Setup, commissioning and fine tuning of this system are discussed.

  20. Application of the M6T Tracker to Simulated and Experimental Multistatic Sonar Data

    NARCIS (Netherlands)

    Theije, P.A.M. de; Kester, L.J.H.M.; Bergmans, J.

    2006-01-01

    This paper describes the first results of applying a multi-sensor multi-hypothesis tracker, called M6T, to simulated and experimental sonar data sets. The simulated data have been generated in the context of the Multistatic Tracking Working Group (MSTWG). For a number of cases (number of sensors and

  1. Structures of the m(6)A Methyltransferase Complex: Two Subunits with Distinct but Coordinated Roles.

    Science.gov (United States)

    Zhou, Katherine I; Pan, Tao

    2016-07-21

    In this issue of Molecular Cell, Wang et al. (2016a) report crystal structures of the core of the METTL3/METTL14 m(6)A methyltransferase complex and propose how the two subunits interact and cooperate to bind and methylate RNA.

  2. THE NUMERICAL SIMULATION OF THE BUFFETING'S APPEARANCE FOR ONERA M6 WING

    Directory of Open Access Journals (Sweden)

    I. I. Lipatov

    2014-01-01

    Full Text Available Introduction to the results of a numerical study buffeting on Onera M6 wing. The determination of condition to appear buffeting of the modes of oscillation of a shock when interacting with in the boundary layer at Mach numbers and angles of attack.

  3. Genome Sequence of Selenium-Solubilizing Bacterium Caulobacter vibrioides T5M6

    DEFF Research Database (Denmark)

    Wang, Yihua; Qin, Yanan; Kot, Witold

    2016-01-01

    Caulobacter vibrioides T5M6 is a Gram-negative strain that strongly solubilizes selenium (Se) mineral into Se(IV) and was isolated from a selenium mining area in Enshi, southwest China. This strain produces the phytohormone IAA and promotes plant growth. Here we present the genome of this strain ...

  4. Study on the Penetrability of PEP-1-P27mt for Cell Membranes in Vitro

    Institute of Scientific and Technical Information of China (English)

    YAN Shirong; ZHU Minglei; QIU Fangcheng; WANG Lilin; QU Shen

    2007-01-01

    Double-stranded oligomeric nucleotide encoding PEP-1 peptides was synthesized, prokaryotic expression pET15b-pep-1-p27mt recombinant constructed, E. coli BL21 (DE3)pLysS transformed and induced with IPTG to highly express fusion protein PEP-1-P27mt. Fusion protein with an N-terminal His-tag could be purified by Ni2+-resin affinity chromatography and identified by SDS-PAGE and Western blotting. Cultured EC9706 cells treated with PEP-1-P27mt revealed that PEP-1-P27mt was transduced into cells after 15 min and reached maximal intracellular concentrations in 2 h. PEP-1-P27mt of 1 μmol/L final concentration could most strongly suppress the growth. It was suggested that PEP-1 can carry P27mt across membrane, which provides a new biological protocol for using cyclin dependent kinase inhibitors p27mt in suppressing the growth of tumor cells.

  5. Characterization and kinetic analysis of enzyme-substrate recognition by three recombinant lactococcal PepVs.

    Science.gov (United States)

    Mori, Sumiko; Miyamoto, Maki; Kaneko, Satoshi; Nirasawa, Satoru; Komba, Shiro; Kasumi, Takafumi

    2006-10-15

    The dipeptidases (PepVs) from three typical lactococcal strains, Lactococcus lactis subsp. lactis (L9), L. lactis subsp. cremoris (L6) and L. lactis subsp. hordniae (hT) were cloned and characterized. The metal-binding, catalytic, and substrate-binding sites are highly conserved among of them. A computer-generated three-dimensional model suggested that the amino acid differences between these PepVs were mostly located away from the active center. L9 PepV does not hydrolyze dipeptides bearing Pro or D-amino acid at the C-terminal amino acid. Unlike PepV from Lactobacillus delbrueckii, L9 PepV does not cleave beta-Asp-His, and has little ability to cleave dipeptides containing a beta-alanine. In addition, L9 PepV has a much higher kcat for dipeptides with an N-terminal Ala but a significantly higher Km when the N-terminal amino acid is Gly. The substrate recognition profile of PepV is further discussed on the basis of the kinetic analysis and the structural model.

  6. Improved PEP-FOLD Approach for Peptide and Miniprotein Structure Prediction.

    Science.gov (United States)

    Shen, Yimin; Maupetit, Julien; Derreumaux, Philippe; Tufféry, Pierre

    2014-10-14

    Peptides and mini proteins have many biological and biomedical implications, which motivates the development of accurate methods, suitable for large-scale experiments, to predict their experimental or native conformations solely from sequences. In this study, we report PEP-FOLD2, an improved coarse grained approach for peptide de novo structure prediction and compare it with PEP-FOLD1 and the state-of-the-art Rosetta program. Using a benchmark of 56 structurally diverse peptides with 25-52 amino acids and a total of 600 simulations for each system, PEP-FOLD2 generates higher quality models than PEP-FOLD1, and PEP-FOLD2 and Rosetta generate near-native or native models for 95% and 88% of the targets, respectively. In the situation where we do not have any experimental structures at hand, PEP-FOLD2 and Rosetta return a near-native or native conformation among the top five best scored models for 80% and 75% of the targets, respectively. While the PEP-FOLD2 prediction rate is better than the ROSETTA prediction rate by 5%, this improvement is non-negligible because PEP-FOLD2 explores a larger conformational space than ROSETTA and consists of a single coarse-grained phase. Our results indicate that if the coarse-grained PEP-FOLD2 method is approaching maturity, we are not at the end of the game of mini-protein structure prediction, but this opens new perspectives for large-scale in silico experiments.

  7. Proline iminopeptidase PepI overexpressing Lactobacillus casei as an adjunct starter in Edam cheese

    Science.gov (United States)

    Navidghasemizad, Sahar; Takala, Timo M; Alatossava, Tapani; Saris, Per EJ

    2013-01-01

    In this study the growth of genetically modified Lactobacillus casei LAB6, overexpressing proline iminopeptidase PepI and its capacity to increase free proline was investigated during ripening of Edam cheese. The strain successfully survived 12 weeks of ripening period in cheese. The food-grade plasmid pLEB604, carrying the pepI gene, was stable, and PepI enzyme was active in LAB6 cells isolated at different stages of the ripening process. However, HPLC analyses indicated that Lb. casei LAB6 could not increase the amount of free proline in ripened cheese. PMID:23851577

  8. PepServe: a web server for peptide analysis, clustering and visualization

    Science.gov (United States)

    Alexandridou, Anastasia; Dovrolis, Nikolas; Tsangaris, George Th.; Nikita, Konstantina; Spyrou, George

    2011-01-01

    Peptides, either as protein fragments or as naturally occurring entities are characterized by their sequence and function features. Many times the researchers need to massively manage peptide lists concerning protein identification, biomarker discovery, bioactivity, immune response or other functionalities. We present a web server that manages peptide lists in terms of feature analysis as well as interactive clustering and visualization of the given peptides. PepServe is a useful tool in the understanding of the peptide feature distribution among a group of peptides. The PepServe web application is freely available at http://bioserver-1.bioacademy.gr/Bioserver/PepServe/. PMID:21572105

  9. EFRT M-12 Issue Resolution: Comparison of PEP and Bench-Scale Oxidative Leaching Results

    Energy Technology Data Exchange (ETDEWEB)

    Rapko, Brian M.; Schonewill, Philip P.; Brown, Christopher F.; Eslinger, Paul W.; Fountain, Matthew S.; Hausmann, Tom S.; Huckaby, James L.; Hanson, Brady D.; Kurath, Dean E.; Minette, Michael J.

    2010-01-01

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed, and operated as part of a plan to respond to issue M12, “Undemonstrated Leaching Processes” of the External Flowsheet Review Team (EFRT) issue response plan.( ) The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing.

  10. EFRT M-12 Issue Resolution: Comparison of Filter Performance at PEP and CUF Scale

    Energy Technology Data Exchange (ETDEWEB)

    Daniel, Richard C.; Billing, Justin M.; Bontha, Jagannadha R.; Brown, Christopher F.; Eslinger, Paul W.; Hanson, Brady D.; Huckaby, James L.; Karri, Naveen K.; Kimura, Marcia L.; Kurath, Dean E.; Minette, Michael J.

    2010-01-22

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed, and operated as part of a plan to respond to issue M12, “Undemonstrated Leaching Processes” of the External Flowsheet Review Team (EFRT) issue response plan.(a) The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing.

  11. The Dublin Institute of Technology Placement Experience Partnership (DIT-PEP) Framework

    OpenAIRE

    Kevin A. Griffin; Flanagan, Sheila; Kennedy-Burke, Elizabeth; Bourke, Stephanie

    2010-01-01

    The School of Hospitality Management and Tourism at the Dublin Institute of Technology (DIT) developed this best practice framework for managing work placement, using the tourism industry as a case study. However, the DIT‐PEP (Placement Experience Partnership) Framework has been devised so that it can be applied across other sectors. This report presents the DIT‐PEP Framework and provides a summary of the approach used in its development.

  12. Effects of a school-based sexuality education program on peer educators: the Teen PEP model

    OpenAIRE

    Jennings, J.M.; HOWARD, S.; Perotte, C. L.

    2014-01-01

    This study evaluated the impact of the Teen Prevention Education Program (Teen PEP), a peer-led sexuality education program designed to prevent unintended pregnancy and sexually transmitted infections (STIs) including HIV among high school students. The study design was a quasi-experimental, nonrandomized design conducted from May 2007 to May 2008. The sample consisted of 96 intervention (i.e. Teen PEP peer educators) and 61 comparison students from five high schools in New Jersey. Baseline a...

  13. The Woods Hole Partnership Education Program (PEP): Broadening Participation in the Geosciences

    Science.gov (United States)

    Scott, O.; Jearld, A., Jr.; Liles, G.; Gutierrez, B.

    2015-12-01

    In March 2009, the Woods Hole Diversity Initiative launched the Partnership Education Program (PEP), a multi-institutional effort to increase diversity in the student population (and ultimately the work force) in the Woods Hole science community. PEP, a summer research internship program, is open to students of all backgrounds but is designed especially to provide opportunities for URM in science, technology, engineering, and mathematics (STEM). PEP is a 10-week program which provides intensive mentored research, a credit-bearing course and supplemental career and professional development activities. Students have opportunities to work in various research areas of geosciences. PEP is emerging as an effective and sustainable approach to bringing students into the STEM research community. PEP is carefully structured to provide critical support for students as they complete their undergraduate experience and prepare for geosciences careers and/or graduate school. The PEP experience is intended to provide students with an entry into the Woods Hole science community, one of the most vibrant marine and environmental research communities in the world. The program aims to provide a first-hand introduction to emerging issues and real-world training in the research skills that students need to advance in science, either as graduate students or bachelors-level working scientists. This is a long-recognized need and efforts are being made to ensure that the students begin to acquire skills and aptitudes that position them to take advantage of a wide range of opportunities. Of note is that the PEP is transitioning into a two year program where students are participating in a second year as a research intern or employee. Since 2013, at least four partner institutions have invited PEP alumni to participate in their respective programs as research assistants and/or full-time technicians.

  14. The first year of the BABAR experiment at PEP-II

    CERN Document Server

    Aubert, Bernard

    2000-01-01

    The BABAR detector, situated at the SLAC PEP-II asymmetric e^+e^- collider, has been recording data at energies on and around the Upsilon(4S) resonance since May 1999. In this paper, we briefly describe the PEP-II B Factory and the BABAR detector. The performance presently achieved by the experiment in the areas of tracking, vertexing, calorimetry and particle identification is reviewed. Analysis concepts that are used in the various papers submitted to this conference are also discussed.

  15. Ca2+ signaling by plant Arabidopsis thaliana Pep peptides depends on AtPepR1, a receptor with guanylyl cyclase activity, and cGMP-activated Ca2+ channels.

    Science.gov (United States)

    Qi, Zhi; Verma, Rajeev; Gehring, Chris; Yamaguchi, Yube; Zhao, Yichen; Ryan, Clarence A; Berkowitz, Gerald A

    2010-12-01

    A family of peptide signaling molecules (AtPeps) and their plasma membrane receptor AtPepR1 are known to act in pathogen-defense signaling cascades in plants. Little is currently known about the molecular mechanisms that link these signaling peptides and their receptor, a leucine-rich repeat receptor-like kinase, to downstream pathogen-defense responses. We identify some cellular activities of these molecules that provide the context for a model for their action in signaling cascades. AtPeps activate plasma membrane inwardly conducting Ca(2+) permeable channels in mesophyll cells, resulting in cytosolic Ca(2+) elevation. This activity is dependent on their receptor as well as a cyclic nucleotide-gated channel (CNGC2). We also show that the leucine-rich repeat receptor-like kinase receptor AtPepR1 has guanylyl cyclase activity, generating cGMP from GTP, and that cGMP can activate CNGC2-dependent cytosolic Ca(2+) elevation. AtPep-dependent expression of pathogen-defense genes (PDF1.2, MPK3, and WRKY33) is mediated by the Ca(2+) signaling pathway associated with AtPep peptides and their receptor. The work presented here indicates that extracellular AtPeps, which can act as danger-associated molecular patterns, signal by interaction with their receptor, AtPepR1, a plasma membrane protein that can generate cGMP. Downstream from AtPep and AtPepR1 in a signaling cascade, the cGMP-activated channel CNGC2 is involved in AtPep- and AtPepR1-dependent inward Ca(2+) conductance and resulting cytosolic Ca(2+) elevation. The signaling cascade initiated by AtPeps leads to expression of pathogen-defense genes in a Ca(2+)-dependent manner.

  16. Ca 2+ signaling by plant Arabidopsis thaliana Pep peptides depends on AtPepR1, a receptor with guanylyl cyclase activity, and cGMP-activated Ca 2+ channels

    KAUST Repository

    Qia, Zhi

    2010-11-18

    A family of peptide signaling molecules (AtPeps) and their plasma membrane receptor AtPepR1 are known to act in pathogendefense signaling cascades in plants. Little is currently known about the molecular mechanisms that link these signaling peptides and their receptor, a leucine-rich repeat receptor-like kinase, to downstream pathogen-defense responses. We identify some cellular activities of these molecules that provide the context for a model for their action in signaling cascades. AtPeps activate plasma membrane inwardly conducting Ca 2+ permeable channels in mesophyll cells, resulting in cytosolic Ca 2+ elevation. This activity is dependent on their receptor as well as a cyclic nucleotide-gated channel (CNGC2). We also show that the leucine-rich repeat receptor- like kinase receptor AtPepR1 has guanylyl cyclase activity, generating cGMP from GTP, and that cGMP can activate CNGC2- dependent cytosolic Ca 2+ elevation. AtPep-dependent expression of pathogen-defense genes (PDF1.2, MPK3, and WRKY33) is mediated by the Ca 2+ signaling pathway associated with AtPep peptides and their receptor. The work presented here indicates that extracellular AtPeps, which can act as danger-associated molecular patterns, signal by interaction with their receptor, AtPepR1, a plasma membrane protein that can generate cGMP. Downstream from AtPep and AtPepR1 in a signaling cascade, the cGMP-activated channel CNGC2 is involved in AtPep- and AtPepR1-dependent inward Ca 2+ conductance and resulting cytosolic Ca 2+ elevation. The signaling cascade initiated by AtPeps leads to expression of pathogen- defense genes in a Ca 2+-dependent manner.

  17. PEP-II Large Power Supplies Rebuild Program at SLAC

    CERN Document Server

    de Lira, Antonio C; Lipari, James J; da Silva Rafael, Fernando

    2005-01-01

    At PEP-II, seven large power supplies (LGPS) are used to power quad magnets in the electron-positron collider region. The LGPS ratings range from 72kW to 270kW, and were installed in 1997. They are unipolar off-line switch mode supplies, with a 6 pulse bridge rectifying 480VAC, 3-phase input power to yield 650VDC unregulated. This unregulated 650VDC is then input into one (or two) IGBT H-bridges, which convert the DC into PWM 16 kHz square wave AC. This high frequency AC drives the primary side of a step-down transformer followed by rectifiers and low pass filters. Over the years, these LGPS have presented many problems mainly in their control circuits, making it difficult to troubleshoot and affecting the overall accelerator availability. A redesign/rebuilding program for these power supplies was established under the coordination of the Power Conversion Department at SLAC. During the 2004 accelerator summer shutdown all the control circuits in these supplies were redesigned and replaced. A new PWM control b...

  18. Recording PEP2 Ring Beam Losses at SLAC

    Energy Technology Data Exchange (ETDEWEB)

    Zelazny, M.; Gromme, T.; Himel, T.; Hendrickson, L.; Krauter, K.; /SLAC

    2005-09-30

    The PEP2 (e+)(e-) storage rings contain many complex interrelated systems. When the beam aborts, examining a record of the orbit from the time just before the abort can help identify the root cause. At the Stanford Linear Accelerator Center (SLAC) a system has been developed to continuously record beam orbits from Beam Position Monitors (BPMS) into a circular buffer. When the beam is aborted the buffers are frozen and their contents are stored for later analysis. BPM orbits are saved on a turn by turn basis for 2800 turns in both the high energy ring (HER) and the low energy ring (LER). Each BPM Processor (BPMP) can either monitor the HER or the LER, but not both as the readout of the two rings is multiplexed into a single readout channel. Tools exist as part of the SLAC Control Program (SCP) to collect, display, and save the data. A physicist or operator can choose a few BPMS in which to view all 2800 turns to identify the turn in which the beam went awry; then ask for that specific orbit from all of the BPMS in the storage ring to determine the root cause of the abort.

  19. Perception of Arabidopsis AtPep peptides, but not bacterial elicitors, accelerates starvation-induced senescence

    Directory of Open Access Journals (Sweden)

    Kay eGully

    2015-01-01

    Full Text Available Members of the AtPep group of Arabidopsis endogenous peptides have frequently been reported to induce pattern-triggered immunity and to increase resistance to diverse pathogens by amplifying the innate immune response. Here, we made the surprising observation that dark-induced leaf senescence was accelerated by the presence of Peps. Adult leaves as well as leaf discs of Col-0 wild type plants showed a Pep-triggered early onset of chlorophyll breakdown and leaf yellowing whereas pepr1 pepr2 double mutant plants were insensitive. In addition, this response was dependent on ethylene signaling and inhibited by the addition of cytokinins. Notably, addition of the bacterial elicitors flg22 or elf18, both potent inducers of pattern-triggered immunity, did not provoke an early onset of leaf senescence.Continuous darkness leads to energy deprivation and starvation and therewith promotes leaf senescence. We found that continuous darkness also strongly induced PROPEP3 transcription. Moreover, Pep-perception led to a rapid induction of PAO, APG7 and APG8a, genes indispensable for chlorophyll degradation as well as autophagy, respectively, and all three hallmarks of starvation and senescence. Notably, addition of sucrose as a source of energy inhibited the Pep-triggered early onset of senescence. In conclusion, we report that Pep-perception accelerates dark/starvation-induced senescence via an early induction of chlorophyll degradation and autophagy. This represents a novel and unique characteristic of PEPR signaling, unrelated to pattern-triggered immunity.

  20. PEP-FOLD: an online resource for de novo peptide structure prediction.

    Science.gov (United States)

    Maupetit, Julien; Derreumaux, Philippe; Tuffery, Pierre

    2009-07-01

    Rational peptide design and large-scale prediction of peptide structure from sequence remain a challenge for chemical biologists. We present PEP-FOLD, an online service, aimed at de novo modelling of 3D conformations for peptides between 9 and 25 amino acids in aqueous solution. Using a hidden Markov model-derived structural alphabet (SA) of 27 four-residue letters, PEP-FOLD first predicts the SA letter profiles from the amino acid sequence and then assembles the predicted fragments by a greedy procedure driven by a modified version of the OPEP coarse-grained force field. Starting from an amino acid sequence, PEP-FOLD performs series of 50 simulations and returns the most representative conformations identified in terms of energy and population. Using a benchmark of 25 peptides with 9-23 amino acids, and considering the reproducibility of the runs, we find that, on average, PEP-FOLD locates lowest energy conformations differing by 2.6 A Calpha root mean square deviation from the full NMR structures. PEP-FOLD can be accessed at http://bioserv.rpbs.univ-paris-diderot.fr/PEP-FOLD.

  1. Is there an optimal level of positive expiratory pressure (PEP) to improve walking tolerance in patients with severe COPD?

    Science.gov (United States)

    Russo, Davide; Simonelli, Carla; Paneroni, Mara; Saleri, Manuela; Piroddi, Ines Maria Grazia; Cardinale, Francesco; Vitacca, Michele; Nicolini, Antonello

    2016-07-01

    The application of positive expiratory pressure (PEP) devices during exercise had been proposed in order to counteract the pulmonary hyperinflation, reduce the dyspnea and thus increase the exercise tolerance in patients with severe chronic obstructive pulmonary disease (COPD). This randomized controlled crossover trial investigated the effect of two different levels of PEP (1 cmH2O and 10 cmH2O) on distance covered at 6minute walk test (6MWT) in patients with severe COPD. Secondary outcomes were the evaluation of PEP effects on physiological and pulmonary function variables. Seventy-two severe COPD patients, referred to our hospitals as in and out patients, were recruited. A basal 6MWT without devices was performed on the first day, and then repeated with PEP 1 cmH2O (PEP1) and 10 cmH2O (PEP10), with a randomized crossover design. Slow and forced spirometries, including the inspiratory capacity measure, were repeated before and after each 6MWT. 50 patients (average age 69,92 year, mean FEV1 41,42% of predicted) concluded the trial. The 6MWT improved significantly among both PEP levels and baseline (323,8 mt at baseline vs. 337,8 PEP1 and 341,8 PEP10; p<.002 and p<.018, respectively). The difference between PEP10 and PEP1 did not reach the significance. No improvements were found in pulmonary function, symptoms and physiological variables after the 6MWT. In patients with severe COPD, the application of 1 cmH2O of PEP seems to improve the exercise tolerance as 10 cmH2O, with similar dyspnea. Further studies should investigate the effects of low levels of PEP on aerobic training programs. Copyright © 2016 SEPAR. Published by Elsevier Espana. All rights reserved.

  2. The (Un)Productivity of the 2014 M6.0 South Napa Aftershock Sequence

    Science.gov (United States)

    Llenos, A. L.

    2014-12-01

    The M6.0 South Napa mainshock produced fewer aftershocks than expected for a California earthquake of its magnitude, which became apparent a few days into the sequence. In the first 4.5 days, only 59 M≥1.8 aftershocks had occurred, the largest of which was a M3.9 that happened a little over two days after the mainshock. In contrast, during the same time period the 2004 M6.0 Parkfield earthquake had over 220 M≥1.8 aftershocks, 6 of which were M≥4. Here I investigate the aftershock productivity and other sequence statistics of the South Napa sequence and compare it with other M~6 California mainshock-aftershock sequences. By focusing on similar size events, they have similar finite extents within the seismotectonic environment. While the productivities of these sequences vary quite a bit, the b-values of the magnitude-frequency distributions all fall in the 0.6-0.8 range for the northern California sequences, slightly lower than the b-value of ~1 typical of southern California seismicity. Despite the relatively low productivity of the South Napa sequence, I show that the Epidemic-Type Aftershock Sequence (ETAS) model (Ogata, JASA, 1988) describes the sequence well and investigate whether the ETAS model parameters suggest that low-productivity sequences are typical for the region. I also explore how quickly after a mainshock these types of models can capture the low productivity of the sequence. The productivity of a sequence is a critical parameter in determining the aftershock probabilities reported in the days following the mainshock. Therefore, the sooner an accurate representation of the aftershock productivity can be obtained, the sooner more accurate aftershock probability reports can be produced.

  3. 感官释放 全新BMW M6

    Institute of Scientific and Technical Information of China (English)

    赵迪

    2006-01-01

    对于极致驾乘乐趣无止尽的热情与追求,一直是BMW集团最感荣耀的信念与使命。全新BMW M6的诞生,不仅传承BMW M1和635CSi的经典性能表现,并成功演绎大型豪华双门跑车6系列的优异设计,成为BMW当代M系列中最疾速的旗舰车款!

  4. Can PEP-3 Provide a Cognitive Profile in Children with ASD? A Comparison between the Developmental Ages of PEP-3 and IQ of Leiter-R

    Science.gov (United States)

    De Giacomo, Andrea; Craig, Francesco; Cristella, Arcangelo; Terenzio, Vanessa; Buttiglione, Maura; Margari, Lucia

    2016-01-01

    Background: The assessment of the intelligence quotient (IQ) in children with autism spectrum disorder (ASD) is important to plan a detailed therapeutic-educative programme. The aim of the study was to evaluate the usefulness of the Psychoeducational Profile-third edition (PEP-3) to estimate the general cognitive development of children with ASD.…

  5. REPORT OF THE SNOWMASS M6 WORKING GROUP ON HIGH INTENSITY PROTON SOURCES.

    Energy Technology Data Exchange (ETDEWEB)

    CHOU,W.; WEI,J.

    2001-08-14

    The M6 working group had more than 40 active participants (listed in Section 4). During the three weeks at Snowmass, there were about 50 presentations, covering a wide range of topics associated with high intensity proton sources. The talks are listed in Section 5. This group also had joint sessions with a number of other working groups, including E1 (Neutrino Factories and Muon Colliders), E5 (Fixed-Target Experiments), M1 (Muon Based Systems), T4 (Particle Sources), T5 (Beam dynamics), T7 (High Performance Computing) and T9 (Diagnostics). The M6 group performed a survey of the beam parameters of existing and proposed high intensity proton sources, in particular, of the proton drivers. The results are listed in Table 1. These parameters are compared with the requirements of high-energy physics users of secondary beams in Working Groups E1 and E5. According to the consensus reached in the E1 and E5 groups, the U.S. HEP program requires an intense proton source, a 1-4 MW Proton Driver, by the end of this decade.

  6. Roles of the Peptide Transport Systems and Aminopeptidase PepA in Peptide Assimilation by Helicobacter pylori.

    Science.gov (United States)

    Ki, Mi Ran; Lee, Ji Hyun; Yun, Soon Kyu; Choi, Kyung Min; Hwang, Se Young

    2015-10-01

    Peptide assimilation in Helicobacter pylori necessitates a coordinated working of the peptide transport systems (PepTs) and aminopeptidase (PepA). We found that H. pylori hydrolyzes two detector peptides, L-phenylalanyl-L-3-thiaphenylalanine (PSP) and L-phenylalanyl-L-2- sulfanilylglycine (PSG), primarily before intake and excludes their antibacterial effects, whereas Escherichia coli readily transports them with resultant growth inhibition. PSP assimilation by H. pylori was inhibited by aminopeptidase inhibitor bestatin, but not by dialanine or cyanide-m-chlorophenylhydrazone, contrary to that of E. coli. RT- and qRT-PCR analyses showed that H. pylori may express first the PepTs (e.g., DppA and DppB) and then PepA. In addition, western blot analysis of PepA suggested that the bacterium secretes PepA in response to specific inducers.

  7. Functional characterization of genetic polymorphisms identified in the promoter region of the bovine PEPS gene.

    Science.gov (United States)

    Ju, Zhihua; Zheng, Xue; Huang, Jinming; Qi, Chao; Zhang, Yan; Li, Jianbin; Zhong, Jifeng; Wang, Changfa

    2012-06-01

    Peptidase S (PEPS) is a metallopeptidase that cleaves N-terminal residues from proteins and peptides. PEPS is used as a cell maintenance enzyme with critical roles in peptide turnover. The promoter region located upstream of the initiation site plays an important role in regulating gene expression. Polymorphism in the promoter region can alter gene expression and lead to biological changes. In the current study, polymorphisms in the promoter region of the PEPS gene were investigated. Polymerase chain reaction (PCR)-restriction fragment length polymorphism and DNA sequencing methods were used to screen sequence variations in the promoter region of DNA samples from 743 Chinese Holstein cattle. Two polymorphisms (g. -534 T>C and g. -2545 G>A) were identified and eight haplotypes were classified by haplotype analysis. The two genetic polymorphisms and haplotypes were associated with fat percentage and somatic cell score in Chinese Holstein cattle. The results of real-time PCR showed that cow kidneys exhibit the highest PEPS expression level. Moreover, bioinformatics analysis predicted that the single-nucleotide polymorphism g. -534 T>C is located in the core promoter region and in the transcription factor binding sites. The promoter activities of the polymorphism of -543 T>C were measured by luciferase assay in the human kidney epithelial cell line 293T. Transcriptional activity is significantly lower in cell lines transfected with the reporter construct containing 2.5 kb upstream fragments with -543 C than in those with wild-type -543 T. The results indicated that genetic variation at locus -543 influences PEPS promoter activity. The genetic variation in the promoter region of PEPS gene may regulate PEPS gene transcription and might have consequences at a regulatory level.

  8. Receptor-mediated hepatic uptake of M6P-BSA-conjugated triplex-forming oligonucleotides in rats.

    Science.gov (United States)

    Ye, Zhaoyang; Cheng, Kun; Guntaka, Ramareddy V; Mahato, Ram I

    2006-01-01

    Excessive production of extracellular matrix, predominantly type I collagen, results in liver fibrosis. Earlier we synthesized mannose 6-phosphate-bovine serum albumin (M6P-BSA) and conjugated to the type I collagen specific triplex-forming oligonucleotide (TFO) for its enhanced delivery to hepatic stellate cells (HSCs), which is the principal liver fibrogenic cell. In this report, we demonstrate a time-dependent cellular uptake of M6P-BSA-33P-TFO by HSC-T6 cells. Both cellular uptake and nuclear deposition of M6P-BSA-33P-TFO were significantly higher than those of 33P-TFO, leading to enhanced inhibition of type I collagen transcription. Following systemic administration into rats, hepatic accumulation of M6P-BSA-33P-TFO increased from 55% to 68% with the number of M6P per BSA from 14 to 27. Unlike 33P-TFO, there was no significant decrease in the hepatic uptake of (M6P)20-BSA-33P-TFO in fibrotic rats. Prior administration of excess M6P-BSA decreased the hepatic uptake of (M6P)20-BSA-33P-TFO from 66% to 40% in normal rats, and from 60% to 15% in fibrotic rats, suggesting M6P/insulin-like growth factor II (M6P/IGF II) receptor-mediated endocytosis of M6P-BSA-33P-TFO by HSCs. Almost 82% of the total liver uptake in fibrotic rats was contributed by HSCs. In conclusion, by conjugation with M6P-BSA, the TFO could be potentially used for the treatment of liver fibrosis.

  9. Variations of terrestrial geomagnetic activity correlated to M6+ global seismic activity

    Science.gov (United States)

    Cataldi, Gabriele; Cataldi, Daniele; Straser, Valentino

    2013-04-01

    From the surface of the Sun, as a result of a solar flare, are expelled a coronal mass (CME or Coronal Mass Ejection) that can be observed from the Earth through a coronagraph in white light. This ejected material can be compared to an electrically charged cloud (plasma) mainly composed of electrons, protons and other small quantities of heavier elements such as helium, oxygen and iron that run radially from the Sun along the lines of the solar magnetic field and pushing into interplanetary space. Sometimes the CME able to reach the Earth causing major disruptions of its magnetosphere: mashed in the region illuminated by the Sun and expanding in the region not illuminated. This interaction creates extensive disruption of the Earth's geomagnetic field that can be detected by a radio receiver tuned to the ELF band (Extreme Low Frequency 0-30 Hz). The Radio Emissions Project (scientific research project founded in February 2009 by Gabriele Cataldi and Daniele Cataldi), analyzing the change in the Earth's geomagnetic field through an induction magnetometer tuned between 0.001 and 5 Hz (bandwidth in which possible to observe the geomagnetic pulsations) was able to detect the existence of a close relationship between this geomagnetic perturbations and the global seismic activity M6+. During the arrival of the CME on Earth, in the Earth's geomagnetic field are generated sudden and intensive emissions that have a bandwidth including between 0 and 15 Hz, an average duration of 2-8 hours, that preceding of 0-12 hours M6+ earthquakes. Between 1 January 2012 and 31 December 2012, all M6+ earthquakes recorded on a global scale were preceded by this type of signals which, due to their characteristics, have been called "Seismic Geomagnetic Precursors" (S.G.P.). The main feature of Seismic Geomagnetic Precursors is represented by the close relationship that they have with the solar activity. In fact, because the S.G.P. are geomagnetic emissions, their temporal modulation depends

  10. Acute guttate psoriasis patients have positive streptococcus hemolyticus throat cultures and elevated antistreptococcal M6 protein titers.

    Science.gov (United States)

    Zhao, Guang; Feng, Xiaoling; Na, Aihua; Yongqiang, Jiang; Cai, Qing; Kong, Jian; Ma, Huijun

    2005-02-01

    To further study the role of Streptococci hemolyticus infection and streptococcal M6 protein in the pathogenesis of acute guttate psoriasis, streptococcal cultures were taken from the throats of 68 patients with acute guttate psoriasis. PCR technique was applied to detect M6 protein encoding DNA from those cultured streptococci. Pure M6 protein was obtained by Sephacry/S-200HR and Mono-Q chromatography from proliferated Streptococcus hemolyticus. Antistreptococcal M6 protein titers were measured in the serum of patients with acute guttate psoriasis, plaque psoriasis and healthy controls by ELISA. A high incidence of Streptococcus hemolyticus culture was observed in the guttate psoriatic group compared with the plaque psoriasis and control groups. Fourteen strains of Streptococcus hemolyticus were cultured from the throats of 68 acute guttate psoriasis patients. Of these, 5 strains contain DNA encoding the M6 protein gene as confirmed by PCR technique. More than 85% purification of M6 protein was obtained from Streptococcus pyogenes. Applying our pure M6 protein with the ELISA methods, we found that the titer of antistreptococcal M6 protein was significantly higher in the serum of guttate psoriasis patients than in the control or plaque psoriasis groups (P psoriasis have a high incidence of Streptococcus hemolyticus in their throats and raised titers of antistreptococcal M6 protein in their sera.

  11. Variation of gravity before the Alxa Zuoqi M5.8 earthquake

    Directory of Open Access Journals (Sweden)

    Jianlin Feng

    2016-07-01

    Full Text Available In this study, a classic survey adjustment computation method was used for data obtained in the Inner Mongolia and Ningxia gravimetric networks between September 2013 and April 2015 so as to investigate the variation of gravity before the Alxa Zuoqi M5.8 earthquake. The relationship between gravity variation and the Alxa Zuoqi M5.8 earthquake was analyzed. The results showed that: (1 the severe variation in gravity field at the test sites before the Alxa Zuoqi M5.8 earthquake, as well as the subsequent accelerated rising, might be an earthquake precursor; (2 the Alxa Zuoqi M5.8 earthquake occurred at the turning point where the high-gravity gradient zone changed from the NE direction to NW.

  12. Anti-apoptotic Effects of PCP4/PEP19 in Human Breast Cancer Cell Lines: A Novel Oncotarget

    OpenAIRE

    HAMADA, Taiji; Souda, Masakazu; Yoshimura, Takuya; Sasaguri, Shoko; Hatanaka, Kazuhito; Tasaki, Takashi; Yoshioka, Takako; Ohi, Yasuyo; Yamada, Sohsuke; Tsutsui, Masato; Umekita, Yoshihisa; TANIMOTO, Akihide

    2014-01-01

    The PCP4/PEP19 is a calmodulin-binding anti-apoptotic peptide in neural cells but its potential role in human cancer has largely been unknown. We investigated the expression of PCP4/PEP19 in human breast cancer cell lines MCF-7, SK-BR-3, and MDA-MB-231 cells, and found that estrogen receptor (ER)-positive MCF-7 and ER-negative SK-BR-3 cells expressed PCP4/PEP19. In the MCF-7 cells, cell proliferation was estrogen-dependent, and PCP4/PEP19 expression was induced by estrogen. In both cell lines...

  13. Emergency therapeutic leukapheresis in a case of acute myeloid leukemia M5

    Science.gov (United States)

    Ranganathan, Sudha; Sesikeran, Shyamala; Gupta, Vineet; Vanajakshi

    2008-01-01

    Cell separators in India are routinely used for plateletpheresis, peripheral blood stem cell collections and therapeutic plasma exchange. Therapeutic leukapheresis, particularly as an emergency procedure, has been uncommonly performed and reported. Here, a case of a 53-year-old male, diagnosed with acute myeloid leukemia subtype M5 (AML M5) with hyperleukocytosis, who underwent emergency leukaphereis, is reported. After two procedures, there was a decrease of WBC count by 85%, which enabled cytotoxic therapy to be initiated. PMID:20041073

  14. How to predict Italy L'Aquila M6.3 earthquake

    Science.gov (United States)

    Guo, Guangmeng

    2016-04-01

    According to the satellite cloud anomaly appeared over eastern Italy on 21-23 April 2012, we predicted the M6.0 quake occurred in north Italy successfully. Here checked the satellite images in 2011-2013 in Italy, and 21 cloud anomalies were found. Their possible correlation with earthquakes bigger than M4.7 which located in Italy main fault systems was statistically examined by assuming various lead times. The result shows that when the leading time interval is set to 23≤ΔT≤45 days, 8 of the 10 quakes were preceded by cloud anomalies. Poisson random test shows that AAR (anomaly appearance rate) and EOR (EQ occurrence rate) is much higher than the values by chance. This study proved the relation between cloud anomaly and earthquake in Italy. With this method, we found that L'Aquila earthquake can also be predicted according to cloud anomaly.

  15. PepMapper: a collaborative web tool for mapping epitopes from affinity-selected peptides.

    Directory of Open Access Journals (Sweden)

    Wenhan Chen

    Full Text Available Epitope mapping from affinity-selected peptides has become popular in epitope prediction, and correspondingly many Web-based tools have been developed in recent years. However, the performance of these tools varies in different circumstances. To address this problem, we employed an ensemble approach to incorporate two popular Web tools, MimoPro and Pep-3D-Search, together for taking advantages offered by both methods so as to give users more options for their specific purposes of epitope-peptide mapping. The combined operation of Union finds as many associated peptides as possible from both methods, which increases sensitivity in finding potential epitopic regions on a given antigen surface. The combined operation of Intersection achieves to some extent the mutual verification by the two methods and hence increases the likelihood of locating the genuine epitopic region on a given antigen in relation to the interacting peptides. The Consistency between Intersection and Union is an indirect sufficient condition to assess the likelihood of successful peptide-epitope mapping. On average from 27 tests, the combined operations of PepMapper outperformed either MimoPro or Pep-3D-Search alone. Therefore, PepMapper is another multipurpose mapping tool for epitope prediction from affinity-selected peptides. The Web server can be freely accessed at: http://informatics.nenu.edu.cn/PepMapper/

  16. Metabolic networks to generate pyruvate, PEP and ATP from glycerol in Pseudomonas fluorescens.

    Science.gov (United States)

    Alhasawi, Azhar; Thomas, Sean C; Appanna, Vasu D

    2016-04-01

    Glycerol is a major by-product of the biodiesel industry. In this study we report on the metabolic networks involved in its transformation into pyruvate, phosphoenolpyruvate (PEP) and ATP. When the nutritionally-versatile Pseudomonas fluorescens was exposed to hydrogen peroxide (H2O2) in a mineral medium with glycerol as the sole carbon source, the microbe reconfigured its metabolism to generate adenosine triphosphate (ATP) primarily via substrate-level phosphorylation (SLP). This alternative ATP-producing stratagem resulted in the synthesis of copious amounts of PEP and pyruvate. The production of these metabolites was mediated via the enhanced activities of such enzymes as pyruvate carboxylase (PC) and phosphoenolpyruvate carboxylase (PEPC). The high energy PEP was subsequently converted into ATP with the aid of pyruvate phosphate dikinase (PPDK), phosphoenolpyruvate synthase (PEPS) and pyruvate kinase (PK) with the concomitant formation of pyruvate. The participation of the phospho-transfer enzymes like adenylate kinase (AK) and acetate kinase (ACK) ensured the efficiency of this O2-independent energy-generating machinery. The increased activity of glycerol dehydrogenase (GDH) in the stressed bacteria provided the necessary precursors to fuel this process. This H2O2-induced anaerobic life-style fortuitously evokes metabolic networks to an effective pathway that can be harnessed into the synthesis of ATP, PEP and pyruvate. The bioconversion of glycerol to pyruvate will offer interesting economic benefit.

  17. Some anomalous behaviour of vertebrates and insects preceding M5+ earthquakes in the North Western Apennines (Italy)

    Science.gov (United States)

    Straser, Valentino

    2013-04-01

    longissimus) was found lying in snow beside a road. A few months later, in the Emilian Po Valley Plain, around 70-80km from the area under investigation, a long seismic sequence featuring seven earthquakes with a magnitude between M5.0 and M6.0, afforded a further opportunity to check for other anomalies. In the area struck by one of the most powerful seisms, local beekeepers noted the sudden disappearance of bees (Apis mellifera) from their hives, especially near San Carlo (Ferrara - Italy), where a deep crack had formed in the ground near the village which, in certain stretches, had raised the ground by as much as half a metre and ejected considerable quantities of mud due to the liquefaction of the sand, in some areas and near the dwellings.

  18. Membrane glycoprotein M6A promotes μ-opioid receptor endocytosis and facilitates receptor sorting into the recycling pathway

    Institute of Scientific and Technical Information of China (English)

    Ying-Jian Liang; Dai-Fei Wu; Ralf Stumm; Volker H(o)llt; Thomas Koch

    2008-01-01

    The interaction of μ-opioid receptor (MOPr) with the neuronal membrane glycoprotein M6a is known to facilitate MOPr endocytosis in human embryonic kidney 293 (HEK293) cells. To further study the role of M6a in the post-endocytotic sorting of MOPr, we investigated the agonist-induced co-internalization of MOPr and M6a and protein targeting after internalization in HEK293 cells that co-expressed HA-tagged MOPr and Myc-tagged M6a. We found that M6a, MOPr, and Rab 11, a marker for recycling endosomes, co-localized in endocytotic vesicles, indicating that MOPr and M6a are primarily targeted to recycling endosomes after endocytosis. Furthermore, co-expression of M6a augmented the post-endocytotic sorting of δ-opioid receptors into the recycling pathway, indicating that M6a might have a more general role in opioid receptor post-ndocytotic sorting. The enhanced post-endocytotic sorting of MOPr into the recycling pathway was accompanied by a decrease in agonist-induced receptor down-regulation of M6a in co-expressing cells. We tested the physiological relevance of these findings in primary cultures of cortical neurons and found that co-expression of M6a markedly increased the translocation of MOPrs from the plasma membrane to intracellular vesicles at steady state and significantly enhanced both constitutive and agonist-induced receptor endocytosis. In conclusion, our results strongly indicate that M6a modulates MOPr endocytosis and post-endocytotic sorting and has an important role in receptor regulation.

  19. Bunch Pattern With More Bunches in PEP-II

    Energy Technology Data Exchange (ETDEWEB)

    Colocho, W.S.; Decker, F.-J.; Novokhatski, A.; Sullivan, M.K.; Wienands, U.; /SLAC

    2005-05-09

    The number of bunches in the PEP-II B-Factory has increased over the years. The luminosity has followed roughly linearly that increase or even faster since we have also lowered the spot size at the interaction point. The recent steps from 939 bunches in June of 2003 to about 1320 in February 2004 (and 1585 in May) should have been followed by a similar rise in luminosity from 6.5 {center_dot} 10{sup 33} l/cm{sup 2} {center_dot} 1/s to 9.1 {center_dot} 10{sup 33} 1/cm{sup 2} {center_dot} 1/s (or even 11 {center_dot} 10{sup 33} 1/cm{sup 2} {center_dot} 1/s in May). This didn't happen so far and a peak luminosity of ''only'' 7.3 {center_dot} 10{sup 33} 1/cm{sup 2} {center_dot} 1/s (or 9.2 {center_dot} 10{sup 33} 1/cm{sup 2} {center_dot} 1/s in May) was achieved with less bunch currents. By filling the then partially filled by-3 pattern to a completely filled by-3 pattern (1133 bunches) we should get 7.9 {center_dot} 10{sup 33} 1/cm{sup 2} {center_dot} 1/s with scaled currents of 1400 mA (HER) on 1900 mA (LER). We were typically running about 1300 mA on 1900 mA with 15% more bunches in February (and 1550 mA on 2450 mA with 40% more bunches in May). The bunch pattern is typically by-2 with trains of 14 bunches out of 18 (or 67 out of 72). The parasitic beam crossings or electron cloud effects might play a role at about a 5-10% luminosity loss. Also the LER x-tune could be pushed further down to the 1/2 integer in the by-3 pattern. On the other hand, we might not push the beam-beam tune shift as hard as in June of 2003 since we have started trickle injection and therefore might avoid the highest peak luminosity which probably has a higher background.

  20. Identification of novel genomic aberrations in AML-M5 in a level of array CGH.

    Directory of Open Access Journals (Sweden)

    Rui Zhang

    Full Text Available To assess the possible existence of unbalanced chromosomal abnormalities and delineate the characterization of copy number alterations (CNAs of acute myeloid leukemia-M5 (AML-M5, R-banding karyotype, oligonucelotide array CGH and FISH were performed in 24 patients with AML-M5. A total of 117 CNAs with size ranging from 0.004 to 146.263 Mb was recognized in 12 of 24 cases, involving all chromosomes other than chromosome 1, 4, X and Y. Cryptic CNAs with size less than 5 Mb accounted for 59.8% of all the CNAs. 12 recurrent chromosomal alterations were mapped. Seven out of them were described in the previous AML studies and five were new candidate AML-M5 associated CNAs, including gains of 3q26.2-qter and 13q31.3 as well as losses of 2q24.2, 8p12 and 14q32. Amplication of 3q26.2-qter was the sole large recurrent chromosomal anomaly and the pathogenic mechanism in AML-M5 was possibly different from the classical recurrent 3q21q26 abnormality in AML. As a tumor suppressor gene, FOXN3, was singled out from the small recurrent CNA of 14q32, however, it is proved that deletion of FOXN3 is a common marker of myeloid leukemia rather than a specific marker for AML-M5 subtype. Moreover, the concurrent amplication of MLL and deletion of CDKN2A were noted and it might be associated with AML-M5. The number of CNA did not show a significant association with clinico-biological parameters and CR number of the 22 patients received chemotherapy. This study provided the evidence that array CGH served as a complementary platform for routine cytogenetic analysis to identify those cryptic alterations in the patients with AML-M5. As a subtype of AML, AML-M5 carries both common recurrent CNAs and unique CNAs, which may harbor novel oncogenes or tumor suppressor genes. Clarifying the role of these genes will contribute to the understanding of leukemogenic network of AML-M5.

  1. Bench-Scale Filtration Testing in Support of the Pretreatment Engineering Platform (PEP)

    Energy Technology Data Exchange (ETDEWEB)

    Billing, Justin M.; Daniel, Richard C.; Kurath, Dean E.; Peterson, Reid A.

    2009-09-28

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed and operated as part of a plan to respond to issue M12, “Undemonstrated Leaching Processes.” The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP testing program specifies that bench-scale testing is to be performed in support of specific operations, including filtration, caustic leaching, and oxidative leaching.

  2. Ghrelin upregulates PepT1 activity in the small intestine epithelium of rats with sepsis.

    Science.gov (United States)

    Liu, Jingquan; Shi, Bin; Shi, Kai; Ma, Guoguang; Zhang, Hongze; Lou, Xiaoli; Liu, Hongxiang; Wan, Shengxia; Liang, Dongyu

    2017-02-01

    Sepsis causes nutritional substrate malabsorption; hence, preventing gut barrier problems and improving the nutritional status in sepsis is a compelling issue. We tested whether ghrelin administration affects peptide transporter 1 (PepT1) activity in the intestinal epithelium of rats with sepsis. Sixty male Sprague-Dawley rats were randomly divided into sham-operated, sepsis, and ghrelin-treated groups. The cecum of sham-operated rats was separated after laparotomy without ligation and perforation. Sepsis group rats underwent cecal ligation and puncture (CLP). Mucosal specimens were used for immunohistochemstry, real-time PCR, and western blotting to detect PepT1 distribution, and mRNA and protein expression levels, respectively. TNF-α, IL-1β, and ghrelin levels were estimated in serum and intestinal mucosal tissue by ELISA. High-performance liquid chromatography was used to measure PepT1 uptake by the epithelial cells. Moreover, survival, body weight, and food intake of the rats were recorded during the 7-day treatment period. All rats in the sham-operated group survived, and 80% of rats in the sepsis group died within 7d of CLP. Treatment with ghrelin attenuated the CLP-induced body weight loss, intestine mucosa damage, and the survival rate was better. In addition, ghrelin attenuated increases in TNF-α and IL-1β production. The expressions of PepT1 mRNA and protein were higher in ghrelin-treated group rats than in sepsis rats. Moreover, the uptake function of PepT1 was better in ghrelin-treated group rats. Ghrelin treatment can reduce the inflammatory response and greatly upregulate the physiological function of PepT1 in intestinal epithelial cells of rats with sepsis. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

  3. Characteristics of crustal strain associated with M=6.4 Baotou earthquake in 1996

    Institute of Scientific and Technical Information of China (English)

    郭良迁; 薄万举; 胡新康; 王敏

    2002-01-01

    Based on the horizontal crustal strain derived from GPS data and the rate accumulation intensity calculated from across-fault vertical deformation, the strain characteristics in the periods of 1992~1995, 1995~1996 and 1996~1999 in Baotou-Datong area is studied in the paper. From the comparison between the crustal strains before and after the M=6.4 Baotou earthquake occurred on May 3, 1996, it is considered that the high-magnitude area with predominant compressive strain might be the seismogenic zone for a coming strong earthquake. The area with the simultaneous higher surface strain, principal compressive strain, shear strain and tendency accumulation might be the place with higher risk of strong earthquakes. Generally, the area with low strain and predominant tensile strain might have a small possibility for strong earthquake development, which belongs to a stable area. The evolution of horizontal strain obtained from GPS measurements carried out in Baotou-Datong area in the period of 1992~1999 reflects the total developing and ending processes of the seismic episode from 1996 to 1998. The area with high and predominant compressive strain and the strain gradient zone can be considered as one of the indicators for determining the strong earthquake risk area in the future.

  4. He I D3 Observation of the 1984 May 22 M6.3 Solar Flare

    CERN Document Server

    Liu, Chang; Deng, Na; Lee, Jeongwoo; Zhang, Jifeng; Choudhary, Debi Prasad; Wang, Haimin

    2013-01-01

    He I D3 line has a unique response to the flare impact on the low solar atmosphere and can be a powerful diagnostic tool for energy transport processes. Using images obtained from the recently digitized films of Big Bear Solar Observatory, we report D3 observation of the M6.3 flare on 1984 May 22, which occurred in an active region with a circular magnetic polarity inversion line (PIL). The impulsive phase of the flare starts with a main elongated source that darkens in D3, inside of which bright emission kernels appear at the time of the initial small peak in hard X-rays (HXRs). These flare cores subsequently evolve into a sharp emission strand lying within the dark halo simultaneously with the main peak in HXRs, reversing the overall source contrast from -5% to 5%. The radiated energy in D3 during the main peak is estimated to be about 10^30 ergs, which is comparable to that carried by nonthermal electrons above 20 keV. Afterwards the flare proceeds along the circular PIL in the counterclockwise direction t...

  5. Accuracy of an unstructured-grid upwind-Euler algorithm for the ONERA M6 wing

    Science.gov (United States)

    Batina, John T.

    1991-01-01

    Improved algorithms for the solution of the three-dimensional, time-dependent Euler equations are presented for aerodynamic analysis involving unstructured dynamic meshes. The improvements have been developed recently to the spatial and temporal discretizations used by unstructured-grid flow solvers. The spatial discretization involves a flux-split approach that is naturally dissipative and captures shock waves sharply with at most one grid point within the shock structure. The temporal discretization involves either an explicit time-integration scheme using a multistage Runge-Kutta procedure or an implicit time-integration scheme using a Gauss-Seidel relaxation procedure, which is computationally efficient for either steady or unsteady flow problems. With the implicit Gauss-Seidel procedure, very large time steps may be used for rapid convergence to steady state, and the step size for unsteady cases may be selected for temporal accuracy rather than for numerical stability. Steady flow results are presented for both the NACA 0012 airfoil and the Office National d'Etudes et de Recherches Aerospatiales M6 wing to demonstrate applications of the new Euler solvers. The paper presents a description of the Euler solvers along with results and comparisons that assess the capability.

  6. Chemical composition of intermediate mass stars members of the M6 (NGC 6405) open cluster

    CERN Document Server

    Kılıçoğlu, Tolgahan; Richer, Jacques; Fossati, Luca; Albayrak, Berahitdin

    2015-01-01

    We present here the first abundance analysis of 44 late B, A and F-type members of the young open cluster M6 (NGC 6405, age about 75 Myrs). Spectra, covering the 4500 to 5800 \\AA{} wavelength range, were obtained using the FLAMES/GIRAFFE spectrograph attached to the ESO Very Large Telescopes (VLT). We determined the atmospheric parameters using calibrations of the Geneva photometry and by adjusting the $H_{\\beta}$ profiles to synthetic ones. The abundances of up to 20 chemical elements, were derived for 19 late B, 16 A and 9 F stars by iteratively adjusting synthetic spectra to the observations. We also derived a mean cluster metallicity of $\\mathrm{[Fe/H]=0.07\\pm0.03}$ dex from the iron abundances of the F-type stars. We find that, for most chemical elements, the normal late B and A-type stars exhibit larger star-to-star abundance variations than the F-type stars do probably because of the faster rotation of the B and A stars. The abundances of C, O, Mg, Si and Sc appear to be anticorrelated to that of Fe, w...

  7. Jet streams anomalies as possible short-term precursors of earthquakes with M>6.0

    Directory of Open Access Journals (Sweden)

    Hong-Chun Wu

    2014-02-01

    Full Text Available Satellite data of thermal images revealed the existence of thermal fields, connected with big linear structures and systems of crust faults. The measuring height of outgoing longwave radiation is located to the range of jet stream. This work describes a possible link between strong earthquakes and jet streams in two regions. The front or tail ends of jet groups maintain their position for 6 or more hours in the vicinity of epicenters of strong (M>6.0 earthquakes in 2006-2010. The probability of observing a stationary jet stream behavior is estimated in 93.6% of the cases on one sixhour map and in 26.7% of cases - on two adjacent maps. The median of distribution of distances between epicenters and the relevant positions of jet stream corresponds to 36.5 km. Estimates of cumulative probability of realization of prediction were 24.2% for 10 days, 48.4% for 20 days, 66.1% for 30 days, 87.1% for 40 days, 93.5% for 50 days and 100% during 70 days. The observed precursory effects are of considerable interest for possible use for real short-term prediction of earthquakes.

  8. Micellization of symmetric PEP-PEO block copolymers in water molecular weight dependence

    CERN Document Server

    Kaya, H; Allgaier, J; Stellbrink, J; Richter, D

    2002-01-01

    The micellar behaviour of the amphiphilic block copolymer poly-(ethylene-propylene)-poly-(ethylene oxide) (PEP-PEO) in aqueous solution has been studied with small-angle neutron scattering. The polymer was studied over a wide range of molecular weights, always keeping the volume of the blocks equal. The scattering behaviour of the solutions showed that a morphological transition takes place upon lowering the molecular weight. The high molecular weight block copolymers all build spherical, monodisperse micelles with large aggregation numbers. At low molecular weights, however, cylindrical micelles are formed. An interesting intermediate case is represented by the PEP2-PEO2 system, in which a morphological transition occurs upon dilution. (orig.)

  9. Lattice Design for PEP-X Ultimate Storage Ring Light Source

    Energy Technology Data Exchange (ETDEWEB)

    Bane, K.L.F.; Cai, Y.; Nosochkov, Y.; Wang, M.-H.; /SLAC; Hettel, R.O.; /SLAC

    2011-12-13

    SLAC expertise in designing and operating high current storage rings and the availability of the 2.2-km PEP-II tunnel present an opportunity for building a next generation light source - PEP-X - that would replace the SPEAR3 storage ring in the future. The PEP-X 'baseline' design, with 164 pm-rad emittance at 4.5 GeV beam energy and a current of 1.5 A, was completed in 2010. As a next step, a so-called 'ultimate' PEP-X lattice, reducing the emittance to 11 pm-rad at zero current, has been designed. This emittance approaches the diffraction limited photon emittance for multi-keV photons, providing near maximum photon brightness and high coherence. It is achieved by using 7-bend achromat cells in the ring arcs and a 90-m damping wiggler in one of the 6 long straight sections. Details of the lattice design, dynamic aperture, and calculations of the intra-beam scattering effect and Touschek lifetime at a nominal 0.2 A current are presented. Accelerator-based light sources are in high demand for many experimental applications. The availability of the 2.2-km PEP-II tunnel at SLAC presents an opportunity for building a next generation light source - PEP-X - that would replace the existing SPEAR3 light source in the future. The PEP-X study started in 2008, and the 'baseline' design, yielding 164 pm-rad emittance at 4.5 GeV beam energy and a current of 1.5 A, was completed in 2010. This relatively conservative design can be built using existing technology. However, for a long term future, it is natural to investigate a more aggressive, so-called 'ultimate' ring design. The goal is to reduce the electron emittance in both x and y planes to near the diffraction limited photon emittance of 8 pm-rad at hard X-ray photon wavelength of 0.1 nm. This would provide a near maximum photon brightness and significant increase in photon coherence. This study was motivated by the advances in low emittance design at MAX-IV. The latter was used as a

  10. Large scale validation of the M5L lung CAD on heterogeneous CT datasets

    Energy Technology Data Exchange (ETDEWEB)

    Lopez Torres, E., E-mail: Ernesto.Lopez.Torres@cern.ch, E-mail: cerello@to.infn.it [CEADEN, Havana 11300, Cuba and INFN, Sezione di Torino, Torino 10125 (Italy); Fiorina, E.; Pennazio, F.; Peroni, C. [Department of Physics, University of Torino, Torino 10125, Italy and INFN, Sezione di Torino, Torino 10125 (Italy); Saletta, M.; Cerello, P., E-mail: Ernesto.Lopez.Torres@cern.ch, E-mail: cerello@to.infn.it [INFN, Sezione di Torino, Torino 10125 (Italy); Camarlinghi, N.; Fantacci, M. E. [Department of Physics, University of Pisa, Pisa 56127, Italy and INFN, Sezione di Pisa, Pisa 56127 (Italy)

    2015-04-15

    Purpose: M5L, a fully automated computer-aided detection (CAD) system for the detection and segmentation of lung nodules in thoracic computed tomography (CT), is presented and validated on several image datasets. Methods: M5L is the combination of two independent subsystems, based on the Channeler Ant Model as a segmentation tool [lung channeler ant model (lungCAM)] and on the voxel-based neural approach. The lungCAM was upgraded with a scan equalization module and a new procedure to recover the nodules connected to other lung structures; its classification module, which makes use of a feed-forward neural network, is based of a small number of features (13), so as to minimize the risk of lacking generalization, which could be possible given the large difference between the size of the training and testing datasets, which contain 94 and 1019 CTs, respectively. The lungCAM (standalone) and M5L (combined) performance was extensively tested on 1043 CT scans from three independent datasets, including a detailed analysis of the full Lung Image Database Consortium/Image Database Resource Initiative database, which is not yet found in literature. Results: The lungCAM and M5L performance is consistent across the databases, with a sensitivity of about 70% and 80%, respectively, at eight false positive findings per scan, despite the variable annotation criteria and acquisition and reconstruction conditions. A reduced sensitivity is found for subtle nodules and ground glass opacities (GGO) structures. A comparison with other CAD systems is also presented. Conclusions: The M5L performance on a large and heterogeneous dataset is stable and satisfactory, although the development of a dedicated module for GGOs detection could further improve it, as well as an iterative optimization of the training procedure. The main aim of the present study was accomplished: M5L results do not deteriorate when increasing the dataset size, making it a candidate for supporting radiologists on large

  11. Enrofloxacin and Probiotic Lactobacilli Influence PepT1 and LEAP-2 mRNA Expression in Poultry

    NARCIS (Netherlands)

    Pavlova, Ivelina; Milanova, Aneliya; Danova, Svetla; Fink-Gremmels, Johanna|info:eu-repo/dai/nl/119949997

    2016-01-01

    Expression of peptide transporter 1 (PepT1) and liver-expressed antimicrobial peptide 2 (LEAP-2) in chickens can be influenced by food deprivation, pathological conditions and drug administration. Effect of three putative probiotic Lactobacillus strains and enrofloxacin on the expression of PepT1

  12. Enrofloxacin and Probiotic Lactobacilli Influence PepT1 and LEAP-2 mRNA Expression in Poultry

    NARCIS (Netherlands)

    Pavlova, Ivelina; Milanova, Aneliya; Danova, Svetla; Fink-Gremmels, Johanna|info:eu-repo/dai/nl/119949997

    2016-01-01

    Expression of peptide transporter 1 (PepT1) and liver-expressed antimicrobial peptide 2 (LEAP-2) in chickens can be influenced by food deprivation, pathological conditions and drug administration. Effect of three putative probiotic Lactobacillus strains and enrofloxacin on the expression of PepT1 an

  13. Anti-apoptotic effects of PCP4/PEP19 in human breast cancer cell lines: a novel oncotarget.

    Science.gov (United States)

    Hamada, Taiji; Souda, Masakazu; Yoshimura, Takuya; Sasaguri, Shoko; Hatanaka, Kazuhito; Tasaki, Takashi; Yoshioka, Takako; Ohi, Yasuyo; Yamada, Sohsuke; Tsutsui, Masato; Umekita, Yoshihisa; Tanimoto, Akihide

    2014-08-15

    The PCP4/PEP19 is a calmodulin-binding anti-apoptotic peptide in neural cells but its potential role in human cancer has largely been unknown. We investigated the expression of PCP4/PEP19 in human breast cancer cell lines MCF-7, SK-BR-3, and MDA-MB-231 cells, and found that estrogen receptor (ER)-positive MCF-7 and ER-negative SK-BR-3 cells expressed PCP4/PEP19. In the MCF-7 cells, cell proliferation was estrogen-dependent, and PCP4/PEP19 expression was induced by estrogen. In both cell lines, PCP4/PEP19 knockdown induced apoptosis and slightly decreased Akt phosphorylation. Knockdown of calcium/calmodulin-dependent protein kinase kinase 1 (CaMKK1), resulting in decreased phospho-Akt(Thr308), enhanced apoptosis in SK-BR-3 but not in MCF-7 cells. CaMKK2 knockdown moderately decreased phospho-Akt(Thr308) and increased apoptosis in MCF-7 cells but not in SK-BR-3 cells. These data indicated that PCP4/PEP19 regulates apoptosis but exact mechanism is still unknown. PCP4/PEP19 can therefore potentially serve as independent oncotarget for therapy of PCP4/PEP19-positive breast cancers irrespective of ER expression.

  14. Five-year cost-effectiveness of the Patient Empowerment Programme (PEP) for type 2 diabetes mellitus in primary care.

    Science.gov (United States)

    Lian, Jinxiao; McGhee, Sarah M; So, Ching; Chau, June; Wong, Carlos K H; Wong, William C W; Lam, Cindy L K

    2017-09-01

    This study evaluated the short-term cost-effectiveness of the Patient Empowerment Programme (PEP) for diabetes mellitus (DM) in Hong Kong. Propensity score matching was used to select a matched group of PEP and non-PEP subjects. A societal perspective was adopted to estimate the cost of PEP. Outcome measures were the cumulative incidence of all-cause mortality and diabetic complication over a 5-year follow-up period and the number needed to treat (NNT) to avoid 1 event. The incremental cost-effectiveness ratio (ICER) of cost per event avoided was calculated using the PEP cost per subject multiplied by the NNT. The PEP cost per subject from the societal perspective was US$247. There was a significantly lower cumulative incidence of all-cause mortality (2.9% vs 4.6%, P < .001), any DM complication (9.5% vs 10.8%, P = .001) and CVD events (6.8% vs 7.6%, P = .018), in the PEP group. The costs per death from any cause, DM complication or case of CVD avoided were US$14 465, US$19 617 and US$30 796, respectively. The extra amount allocated to managing PEP was small and it appears cost-effective in the short-term as an addition to RAMP. © 2017 John Wiley & Sons Ltd.

  15. Comparing M5 Model Trees and Neural Networks for River Level Forecasting

    Science.gov (United States)

    Khan, S.; See, L.

    2005-12-01

    Artificial neural networks (ANNs) have been the subject of much research activity in hydrological modelling over the last decade yet this represents only one data-driven modelling approach from among a very rich set. M5 model trees are an example of a technique that has had little application in the hydrological domain yet the results are promising (Solomatine and Xue, 2004). They are a machine learning approach that combines regression trees and classification. The input space is partitioned into subsets based on entropy measures, and regression equations are then fit to these subsets. The advantages over ANNs are (a) their ability to provide knowledge in the form of a decision tree and (b) much faster training times. This has important implications for operational use as they are not black box models. In this study ANNs, M5 model trees and time series analysis have been used to develop models to predict river levels at a gauging station in the River Ouse catchment in Northern England. Two lead times have been used: t+6 and t+24 hours. The input data consisted of historical levels at the gauging stations, upstream level data and rainfall from five rain gauges across the catchment, determined by correlation with the output. The results of the study showed that the ANNs outperformed both the M5 model trees and time series approaches when considering global goodness-of-fit measures such as root mean squared error and coefficient of efficiency. However, the difference in performance between the ANNs and M5 model trees was not large, e.g. 1 percent difference in coefficient of efficiency for t+6 hours. When considering the longer lead time of t+24 hours, the performance of the ANNs and M5 model trees almost converged. The M5 model tree, however, also provides the rules of operation. The first partition for both the t+6 and t+24 hour models was determined by the value of the river level at one of the upstream stations. The individual regression equations associated with

  16. Increased β-haemolytic group A streptococcal M6 serotype and streptodornase B-specific cellular immune responses in Swedish narcolepsy cases.

    Science.gov (United States)

    Ambati, A; Poiret, T; Svahn, B-M; Valentini, D; Khademi, M; Kockum, I; Lima, I; Arnheim-Dahlström, L; Lamb, F; Fink, K; Meng, Q; Kumar, A; Rane, L; Olsson, T; Maeurer, M

    2015-09-01

    Type 1 narcolepsy is a neurological disorder characterized by excessive daytime sleepiness and cataplexy associated with the HLA allele DQB1*06:02. Genetic predisposition along with external triggering factors may drive autoimmune responses, ultimately leading to the selective loss of hypocretin-positive neurons. The aim of this study was to investigate potential aetiological factors in Swedish cases of postvaccination (Pandemrix) narcolepsy defined by interferon-gamma (IFNγ) production from immune cells in response to molecularly defined targets. Cellular reactivity defined by IFNγ production was examined in blood from 38 (HLA-DQB1*06:02(+) ) Pandemrix-vaccinated narcolepsy cases and 76 (23 HLA-DQB1*06:02(+) and 53 HLA-DQB1*06:02(-) ) control subjects, matched for age, sex and exposure, using a variety of different antigens: β-haemolytic group A streptococcal (GAS) antigens (M5, M6 and streptodornase B), influenza (the pandemic A/H1N1/California/7/09 NYMC X-179A and A/H1N1/California/7/09 NYMC X-181 vaccine antigens, previous Flu-A and -B vaccine targets, A/H1N1/Brisbane/59/2007, A/H1N1/Solomon Islands/3/2006, A/H3N2/Uruguay/716/2007, A/H3N2/Wisconsin/67/2005, A/H5N1/Vietnam/1203/2004 and B/Malaysia/2506/2004), noninfluenza viral targets (CMVpp65, EBNA-1 and EBNA-3) and auto-antigens (hypocretin peptide, Tribbles homolog 2 peptide cocktail and extract from rat hypothalamus tissue). IFN-γ production was significantly increased in whole blood from narcolepsy cases in response to streptococcus serotype M6 (P = 0.0065) and streptodornase B protein (P = 0.0050). T-cell recognition of M6 and streptodornase B was confirmed at the single-cell level by intracellular cytokine (IL-2, IFNγ, tumour necrosis factor-alpha and IL-17) production after stimulation with synthetic M6 or streptodornase B peptides. Significantly, higher (P = 0.02) titres of serum antistreptolysin O were observed in narcolepsy cases, compared to vaccinated controls. β-haemolytic GAS may be

  17. Near-Field Deformation Associated with the M6.0 South Napa Earthquake Surface Rupture

    Science.gov (United States)

    Brooks, B. A.; Hudnut, K. W.; Glennie, C. L.; Ericksen, T.

    2014-12-01

    We characterize near-field deformation associated with the surface rupture of the M6.0 South Napa earthquake from repeat mobile laser scanning (MLS) surveys. Starting the day after the main shock, we operated, sometime simultaneously, short (~75 m range) and medium (~400m range) range laser scanners on a truck or backpack. We scanned most of the length of the principal and secondary surface ruptures at speeds less than 10 km/hr. Scanning occurred primarily in either suburban subdivisions or cultivated vineyards of varying varietals with differing leaf patterns and stages of maturity. Spot-spacing is dense enough (100s of points/m^2) to permit creation of 10-25cm digital elevation models of much of the surface rupture. Scanned features of the right-lateral rupture include classic mole tracks through a variety of soil types, en echelon cracks, offset vine rows, and myriad types of pavement-related deformation. We estimate coseismic surface displacements ranging from 5 to 45 cm by examining offset cultural features and vine rows and by comparing the MLS data with preexisting airborne laser scans from 2003 using point-cloud and solid-modeling methodologies. Additionally, we conducted repeat MLS scans to measure the magnitude and spatial variation of fault afterslip, exceeding 20 cm in some places, particularly in the southern portion of the rupture zone. We anticipate these data sets, in conjunction with independently collected ground-based alinement arrays and space-based geodetic data will contribute significant insight into topics of current debate including assessing the most appropriate material models for shallow fault zones and how shallow and deeper fault slip relate to one another.

  18. Hidden selection rules, M5-instantons and fluxes in F-theory

    Energy Technology Data Exchange (ETDEWEB)

    Martucci, Luca [Dipartimento di Fisica e Astronomia ‘Galileo Galilei’, Università di Padova, & I.N.F.N. Sezione di Padova, via Marzolo 8, I-35131 Padova (Italy); Weigand, Timo [Institut für Theoretische Physik, Ruprecht-Karls-Universität, Philosophenweg 19, 69120 Heidelberg (Germany)

    2015-10-21

    We introduce a new approach to investigate the selection rules governing the contributions of fluxed M5-instantons to the F-theory four-dimensional effective action, with emphasis on the generation of charged matter F-terms. The structure of such couplings is unraveled by exploiting the perturbative and non-perturbative homological relations, introduced in our companion paper http://dx.doi.org/10.1007/JHEP09(2015)198, which encode the interplay between the self-dual 3-form flux on the M5-brane, the background 4-form flux and certain fibral curves. The latter are wrapped by time-like M2-branes representing matter insertions in the instanton path integral. In particular, we clarify how fluxed M5-instantons detect the presence of geometrically massive U(1)s which are responsible for ‘hidden’ selection rules. We discuss how for non-generic embeddings the M5-instanton can probe ‘locally massless’ U(1) symmetries if the rank of its Mordell-Weil group is enhanced compared to that of the bulk. As a phenomenological off-spring we propose a new type of non-perturbative corrections to Yukawa couplings which may change the rank of the Yukawa matrix. Along the way, we also gain new insights into the structure of massive U(1) gauge fluxes in the stable degeneration limit.

  19. The November 2011 M5.7 Oklahoma Earthquake: Induced or Triggered?

    Science.gov (United States)

    Sumy, D. F.; Cochran, E. S.; Aminzadeh, F.

    2013-12-01

    On 6 November 2011, a M5.7 right-lateral strike-slip earthquake ruptured a section of the Wilzetta fault that strikes approximately N55E in Prague, Oklahoma. This earthquake was preceded by a right-lateral strike-slip M5.0 foreshock that occurred on 5 November 2011 and followed by a left-lateral strike-slip M5.0 aftershock that occurred on 8 November 2011. Seismicity during the sequence delineates three distinct near-vertical fault planes. The M5.0 foreshock was within several hundred meters of two active, high-volume injection wells, and thus was interpreted as potentially induced by Keranen et al. [2013]. Immediately following the M5.0 foreshock, three temporary seismometers were installed, with additional 44 stations installed after the M5.7 mainshock. These 47 stations recorded thousands of foreshocks and aftershocks that surrounded the three M≥5.0 events. We hypothesize that while the M5.0 foreshock (Event A) is potentially induced by anthropogenic activities, the static stress change imparted by this event triggered the M5.7 mainshock (Event B). To investigate this hypothesis, we calculate the static Coulomb stress change on 110 focal mechanism solutions examined in this study. Many of the focal mechanisms are consistent with the rupture planes defined by the seismicity of Events A and B. However, several of the focal mechanism solutions exhibit dip-slip focal mechanisms and/or are more consistent with the M5.0 aftershock (Event C). Event C occurs on a previously unmapped, east-west striking left-lateral fault plane, which differs substantially from the orientation of Events A and B. The diverse range of focal mechanism solutions suggests complex fault interactions within the Wilzetta fault system. Based on these focal mechanism solutions, we investigate the static stress changes imparted on the aftershocks that result from each of the M≥5.0 earthquakes. We find that the stress change induced by the Event A increases the stress at the hypocentral location

  20. Review of e/sup +/e/sup -/ physics at PEP - 1982

    Energy Technology Data Exchange (ETDEWEB)

    Hollebeek, R.

    1982-10-01

    Results obtained at PEP by the MARK II, MAC and DELCO collaborations in the past year are reviewed. They include QED tests, measurements of tau lepton properties, charm and bottom fragmentation functions, scaling violations, energy correlations and the total hadronic cross section.

  1. Using world wide web via netscape - a short guide for PEP-II/BABAR

    Energy Technology Data Exchange (ETDEWEB)

    Chan, A.; Nelson, J.

    1995-09-01

    This report discusses the following topics dealing with searching the internet at the PEP-II storage ring facility: (1) what is the Internet, Mosaic and Netscape; (2) using URL`s; (3) Netscape menus and buttons - what they do; (4) Using bookmarks; (5) FTP through Netscape; (6) FTP through Fetch on the Macintosh; (7) installation Netscape; (8) configuring Netscape; and (9) references.

  2. Effects of a School-Based Sexuality Education Program on Peer Educators: The Teen PEP Model

    Science.gov (United States)

    Jennings, J. M.; Howard, S.; Perotte, C. L.

    2014-01-01

    This study evaluated the impact of the Teen Prevention Education Program (Teen PEP), a peer-led sexuality education program designed to prevent unintended pregnancy and sexually transmitted infections (STIs) including HIV among high school students. The study design was a quasi-experimental, nonrandomized design conducted from May 2007 to May…

  3. Effects of a School-Based Sexuality Education Program on Peer Educators: The Teen PEP Model

    Science.gov (United States)

    Jennings, J. M.; Howard, S.; Perotte, C. L.

    2014-01-01

    This study evaluated the impact of the Teen Prevention Education Program (Teen PEP), a peer-led sexuality education program designed to prevent unintended pregnancy and sexually transmitted infections (STIs) including HIV among high school students. The study design was a quasi-experimental, nonrandomized design conducted from May 2007 to May…

  4. Climate Variability in Europe and Africa: a PAGES-PEP III Time Stream II Synthesis

    NARCIS (Netherlands)

    Partridge, Tim; Lowe, John; Barker, Philip; Hoelzmann, Philipp; Magri, Donatella; Saarnisto, Matti; Vandenberghe, Jef; Street-Perrott, F.; Gasse, Françoise

    2004-01-01

    The PEP III Europe-Africa transect extends from the arctic fringes of NW Eurasia to South Africa. It encompasses the presently temperate sector of mid-latitude Europe, the Mediterranean region, the arid and semi-arid lands of the Sahara, Sahel and the Arabian Peninsula, and the inter-tropical belt

  5. First evidence of pep solar neutrinos by direct detection in Borexino.

    Science.gov (United States)

    Bellini, G; Benziger, J; Bick, D; Bonetti, S; Bonfini, G; Bravo, D; Buizza Avanzini, M; Caccianiga, B; Cadonati, L; Calaprice, F; Carraro, C; Cavalcante, P; Chavarria, A; Chepurnov, A; D'Angelo, D; Davini, S; Derbin, A; Etenko, A; Fomenko, K; Franco, D; Galbiati, C; Gazzana, S; Ghiano, C; Giammarchi, M; Goeger-Neff, M; Goretti, A; Grandi, L; Guardincerri, E; Hardy, S; Ianni, Aldo; Ianni, Andrea; Korablev, D; Korga, G; Koshio, Y; Kryn, D; Laubenstein, M; Lewke, T; Litvinovich, E; Loer, B; Lombardi, F; Lombardi, P; Ludhova, L; Machulin, I; Manecki, S; Maneschg, W; Manuzio, G; Meindl, Q; Meroni, E; Miramonti, L; Misiaszek, M; Montanari, D; Mosteiro, P; Muratova, V; Oberauer, L; Obolensky, M; Ortica, F; Otis, K; Pallavicini, M; Papp, L; Perasso, L; Perasso, S; Pocar, A; Quirk, J; Raghavan, R S; Ranucci, G; Razeto, A; Re, A; Romani, A; Sabelnikov, A; Saldanha, R; Salvo, C; Schönert, S; Simgen, H; Skorokhvatov, M; Smirnov, O; Sotnikov, A; Sukhotin, S; Suvorov, Y; Tartaglia, R; Testera, G; Vignaud, D; Vogelaar, R B; von Feilitzsch, F; Winter, J; Wojcik, M; Wright, A; Wurm, M; Xu, J; Zaimidoroga, O; Zavatarelli, S; Zuzel, G

    2012-02-03

    We observed, for the first time, solar neutrinos in the 1.0-1.5 MeV energy range. We determined the rate of pep solar neutrino interactions in Borexino to be 3.1±0.6{stat}±0.3{syst}  counts/(day·100  ton). Assuming the pep neutrino flux predicted by the standard solar model, we obtained a constraint on the CNO solar neutrino interaction rate of solar neutrino signal is disfavored at 99.97% C.L., while the absence of the pep signal is disfavored at 98% C.L. The necessary sensitivity was achieved by adopting data analysis techniques for the rejection of cosmogenic {11}C, the dominant background in the 1-2 MeV region. Assuming the Mikheyev-Smirnov-Wolfenstein large mixing angle solution to solar neutrino oscillations, these values correspond to solar neutrino fluxes of (1.6±0.3)×10{8}  cm{-2} s^{-1} and solar models. These results represent the first direct evidence of the pep neutrino signal and the strongest constraint of the CNO solar neutrino flux to date.

  6. Investigation of the substrate specificity of the proton coupled peptide transporter PepTSo from Shewanella oneidensis

    DEFF Research Database (Denmark)

    Prabhala, Bala Krishna; Aduri, Nanda Gowtham; Hald, Helle

    2015-01-01

    The mammalian proton coupled transporter (POT) hPepT1 has been studied intensively due to its role in nutrient and drug absorption in the small intestine. In the absence of a crystal structure of hPepT1, the available structures of bacterial POTs, among which PepTSo from Shewanella oneidensis has...

  7. CHEMICAL COMPOSITION OF INTERMEDIATE-MASS STAR MEMBERS OF THE M6 (NGC 6405) OPEN CLUSTER

    Energy Technology Data Exchange (ETDEWEB)

    Kılıçoğlu, T.; Albayrak, B. [Ankara University, Faculty of Science, Department of Astronomy and Space Sciences, 06100, Tandoğan, Ankara (Turkey); Monier, R. [LESIA, UMR 8109, Observatoire de Paris Meudon, Place J. Janssen, Meudon (France); Richer, J. [Département de physique, Université de Montréal, 2900, Boulevard Edouard-Montpetit, Montréal QC, H3C 3J7 (Canada); Fossati, L., E-mail: tkilicoglu@ankara.edu.tr, E-mail: balbayrak@ankara.edu.tr, E-mail: Richard.Monier@obspm.fr, E-mail: Jacques.Richer@umontreal.ca, E-mail: lfossati@astro.uni-bonn.de [Argelander-Institut für Astronomie der Universität Bonn, Auf dem Hügel 71, D-53121, Bonn (Germany)

    2016-03-15

    We present here the first abundance analysis of 44 late B-, A-, and F-type members of the young open cluster M6 (NGC 6405, age about 75 Myr). Low- and medium-resolution spectra, covering the 4500–5840 Å wavelength range, were obtained using the FLAMES/GIRAFFE spectrograph attached to the ESO Very Large Telescopes. We determined the atmospheric parameters using calibrations of the Geneva photometry and by adjusting the H{sub β} profiles to synthetic ones. The abundances of up to 20 chemical elements, from helium to mercury, were derived for 19 late B, 16 A, and 9 F stars by iteratively adjusting synthetic spectra to the observations. We also derived a mean cluster metallicity of [Fe/H] = 0.07 ± 0.03 dex from the iron abundances of the F-type stars. We find that for most chemical elements, the normal late B- and A-type stars exhibit larger star-to-star abundance variations than the F-type stars probably because of the faster rotation of the B and A stars. The abundances of C, O, Mg, Si, and Sc appear to be anticorrelated with that of Fe, while the opposite holds for the abundances of Ca, Ti, Cr, Mn, Ni, Y, and Ba as expected if radiative diffusion is efficient in the envelopes of these stars. In the course of this analysis, we discovered five new peculiar stars: one mild Am, one Am, and one Fm star (HD 318091, CD-32 13109, GSC 07380-01211, CP1), one HgMn star (HD 318126, CP3), and one He-weak P-rich (HD 318101, CP4) star. We also discovered a new spectroscopic binary, most likely a SB2. We performed a detailed modeling of HD 318101, the new He-weak P-rich CP star, using the Montréal stellar evolution code XEVOL which self-consistently treats all particle transport processes. Although the overall abundance pattern of this star is properly reproduced, we find that detailed abundances (in particular the high P excess) resisted modeling attempts even when a range of turbulence profiles and mass-loss rates were considered. Solutions are proposed which are

  8. E-DECIDER Rapid Response to the M 6.0 South Napa Earthquake

    Science.gov (United States)

    Glasscoe, M. T.; Parker, J. W.; Pierce, M. E.; Wang, J.; Eguchi, R. T.; Huyck, C. K.; Hu, Z.; Chen, Z.; Yoder, M. R.; Rundle, J. B.; Rosinski, A.

    2014-12-01

    E-DECIDER initiated rapid response mode when the California Earthquake Clearinghouse was activated the morning following the M6 Napa earthquake. Data products, including: 1) rapid damage and loss estimates, 2) deformation magnitude and slope change maps, and 3) aftershock forecasts were provided to the Clearinghouse partners within 24 hours of the event via XchangeCore Web Service Data Orchestration sharing. NASA data products were provided to end-users via XchangeCore, EERI and Clearinghouse websites, and ArcGIS online for Napa response, reaching a wide response audience. The E-DECIDER team helped facilitate rapid delivery of NASA products to stakeholders and participated in Clearinghouse Napa earthquake briefings to update stakeholders on product information. Rapid response products from E-DECIDER can be used to help prioritize response efforts shortly after the event has occurred. InLET (Internet Loss Estimation Tool) post-event damage and casualty estimates were generated quickly after the Napa earthquake. InLET provides immediate post-event estimates of casualties and building damage by performing loss/impact simulations using USGS ground motion data and FEMA HAZUS damage estimation technology. These results were provided to E-DECIDER by their collaborators, ImageCat, Inc. and the Community Stakeholder Network (CSN). Strain magnitude and slope change maps were automatically generated when the Napa earthquake appeared on the USGS feed. These maps provide an early estimate of where the deformation has occurred and where damage may be localized. Using E-DECIDER critical infrastructure overlays with damage estimates, decision makers can direct response effort that can be verified later with field reconnaissance and remote sensing-based observations. Earthquake aftershock forecast maps were produced within hours of the event. These maps highlight areas where aftershocks are likely to occur and can also be coupled with infrastructure overlays to help direct response

  9. PEP725: real time monitoring of phenological events in Austria, Germany, Sweden and Switzerland

    Science.gov (United States)

    Ungersboeck, Markus; Bolmgren, Kjell; Huebner, Thomas; Kaspar, Frank; Langvall, Ola; Paul, Anita; Pietragalla, Barbara; Scheifinger, Helfried; Koch, Elisabeth

    2017-04-01

    The main objective of PEP725 (Pan European Phenological database; http://www.pep725.eu/) is to promote and facilitate phenological research by delivering a pan European phenological database with an open, unrestricted data access for science, research and education. The first datasets in PEP725 date back to 1868; however, there are only a few observations available until 1950. From 1951 onwards, the phenological networks all over Europe developed rapidly. So far more than 11 923 489 of observations of 121 different plants are now available in the PEP725 database. Approximately 40 % of all data are flowering records, 10 % are fruit ripeness observations and also 10 % are leaf unfolding observations. The PEP725 database is updated annually. But since recently Deutscher Wetterdienst and MeteoSwiss offer their observers to upload their observations via web in real time mode, ZAMG introduced this web-based feature already in 2007 (phenowatch.at) and the observers of SWE-NPN (the Swedish National Phenology Network) can submit their observations through the web application naturenskalender.se since the start in 2008. Since spring 2016 one you can find a real time animated monitoring tool showing how the "green wave" in spring is moving from 46° northern latitude up to the Arctic Circle and the "brown wave" in autumn in the opposite direction. In 2015 the "green wave" speeds up from app. 4.4 days/degree latitude for hazel flowering to 2.9 days/ degree latitude for willow flowering and 2.25 days/degree latitude for birch leaf unfolding. There are other European countries as for instance Italy, The Netherlands, UK that have been doing visualizations of ground phenology in real time for some years, but these efforts always end at the national borders. PEP725 is funded by ZAMG, the Austrian ministry of science, research and economy and EUMETNET, the network of European meteorological services. So far 21 European meteorological services and 7 partners from different

  10. The key determinants of perceived external prestige (PEP – Qualitative research approach

    Directory of Open Access Journals (Sweden)

    Tamara Sušanj Šulentić

    2017-01-01

    Full Text Available Perceived external prestige (PEP is a well-known concept oriented towards describing the way members of a certain organization interpret and assess their organisational reputation. Such perception can significantly affect employees’ identification and loyalty to the organisation as well as their job satisfaction and work performance. According to the social identification theory, people define themselves and others with respect to their belonging to a particular group or organization, and their basic motive is a personal need for self-respect and a sense of pride. Employees’ perception of being members of an important, reputable and significant organisation contributes to the feeling of self-respect, which increases their individual social value and status. According to literature, there are only few objections to the concept of PEP, mainly those related to the determination of its structure and, with it, to its management. Although there is a growing literature on PEP, it is still not clear whether PEP is a one-dimensional or a multidimensional construct. If PEP is a multidimensional concept, it is important to specify its key components, in order to enhance the management of favourable organizational prestige in a real work environment. The purpose of this paper was to determine the structure of PEP and important sources of information, based on which, employees value the prestige of their organisation. Qualitative research was conducted, comprising nine semi-structured interviews with communication experts working for a multinational organisation operating in several European countries. The results of this paper indicate that PEP is a multidimensional construct, with several components, important for its creation and management. Those components can be grouped into three main categories: track record of success and the position of the organisation on the market, social impact of the organisation on the immediate environment and the

  11. Detecting β-thalassaemia mutations from a single cell by PEP and RDB

    Institute of Scientific and Technical Information of China (English)

    YI Ping; LI Li; YAO Hong; ZHOU Yuan-guo; DENG Bing; CHEN Zhu-qin

    2006-01-01

    Objective:To evaluate the possibility of the technology involving PEP and RDB for detecting β-thalassaemia multipoint mutations from a single cell simultaneously. Methods: A set of allele specific oligonucleotide (ASO) probes used for detecting 8 familiar β-thalassaemia mutations (CD41-42, IVS- Ⅱ -654, CD17, TATA box nt-28, CD71-72, TATA box nt-29, CD26, IVS- Ⅰ -5) were immobilized on a strip of nylon membrane. The genome of a individual cell was amplified by primer extension preamplification (PEP) with the mixture of15-base random oligonucleotides. The aliquots from PEP were used to amplify the objective gene fractions of β-thalassaemia gene by nested or semi-nested PCR. The membrane was hybridized with the final amplified products and then treated with Streptavidin-HRP and color development.Results :Totally 30 lymphocytes were picked up from blood samples of 1 healthy female and 4 patients with known β-thalassaemia mutations respectively. Each single lymphocyte was lysed in the proteinase K buffer. The amplification efficacy was 94.0% and alle drop-out(ADO) rate was 8.0%. Revert dot blot (RDB) was applied to the final amplified products from the 5 participants. The results of diagnosis were the same to the expected, and their genotypes were N/N, CD17 (A→T)/N, IVS- Ⅱ -654(C→T)/CD17(A → T), CD41-42 (-CTTT)/N and TATA box nt-28 (A→G)/N, respectively. Conclusion: The technology involving PEP and RDB could detectmultiple β-thalassaemia mutations from a single cell simultaneously,and the research provides experimental evidences for the feasibility of applying PEP and DNA array technology to screening multiple genetic mutations from a single cell, and will be applied to preimplantation genetic diagnosis and non-invasive prenatal diagnosis for β-thalassaemia.

  12. Phase evolution and microwave dielectric properties of A5M5O17-type ceramics

    Directory of Open Access Journals (Sweden)

    Ali Murad

    2017-07-01

    Full Text Available A number of A5M5O17 (A = Na, Ca, Sr, La, Nd, Sm, Gd, Dy, Yb; B = Ti, Nb, Ta type compounds were prepared by a solid-state sintering route and characterized in terms of structure, microstructure and microwave dielectric properties. The compatibility of rare earths with mixed niobate/tantalate and titanate phases was investigated. The larger ionic radii mismatch resulted in the formation of pyrochlore and/or mixed phases while in other cases, pure A5M5O17 phase was formed. The samples exhibited relative permittivity in the range of 35 to 82, quality factor (Q × fo = 897 GHz to 11946 GHz and temperature coefficient of resonance frequency (τf = -120 ppm/°C to 318 ppm/°C.

  13. M5-brane in three-form flux and multiple M2-branes

    CERN Document Server

    Ho, Pei-Ming; Matsuo, Yutaka; Shiba, Shotaro

    2008-01-01

    We investigate the Bagger-Lambert-Gustavsson model associated with the Nambu-Poisson algebra as a theory describing a single M5-brane. We argue that the model is a gauge theory associated with the volume-preserving diffeomorphism in the three-dimenisonal internal space. We derive gauge transformations, actions, supersymmetry transformations, and equations of motions in terms of six-dimensional fields. The equations of motions are written in gauge-covariant form, and the equations for tensor fields have manifest self-dual structure. We demonstrate that the double dimensional reduction of the model reproduces the non-commutative U(1) gauge theory on a D4-brane with a small non-commutativity parameter. We establish relations between parameters in the BLG model and those in M-theory. This shows that the model describes an M5-brane in a large C-field background.

  14. 3d $\\mathcal{N}=2$ minimal SCFTs from Wrapped M5-branes

    CERN Document Server

    Bae, Jin-Beom; Lee, Jaehoon

    2016-01-01

    We study CFT data of 3-dimensional superconformal field theories (SCFTs) arising from wrapped two M5-branes on closed hyperbolic 3-manifolds. Via so-called 3d/3d correspondence, central charges of these SCFTs are related to a $SL(2)$ Chern-Simons (CS) invariant on the 3-manifolds. We give a rigorous definition of the invariant in terms of resurgence theory and a state-integral model for the complex CS theory. We numerically evaluate the central charges for several closed 3-manifolds with small hyperbolic volume. The computation suggests that the wrapped M5-brane systems give infinitely many discrete SCFTs with small central charges. We also analyze these `minimal' SCFTs in the eye of 3d $\\mathcal{N}=2$ superconformal bootstrap.

  15. Riding the Populist Web: Contextualizing the Five Star Movement (M5S in Italy

    Directory of Open Access Journals (Sweden)

    Liza Lanzone

    2015-08-01

    Full Text Available This article focuses on three mechanisms to explain the rise of populist movements across Europe. They are politicization of resentment, exploitation of social cleavages, and polarization of resentment and feelings of non-representation. We conceptualize populism as a strategic power game aiming to transform potential majorities into real ones by creating or reframing social cleavages. Our theoretical model is used to explain the rise of the Five Star Movement (M5S. Beppe Grillo’s M5S gained notoriety on the national political scene in Italy just before the 2013 elections and succeeded in get-ting nearly 25 percent of the overall vote. Moreover, it was the only political force that was able to attract votes across the different regions in Italy, making it the country’s only truly national party.

  16. 奥林巴斯OM—DE—M5数码相机测试

    Institute of Scientific and Technical Information of China (English)

    2012-01-01

    奥林巴斯公司在相机制造方面资历资深,沿袭胶片时代”PEN”系列的理念成功推出数码版PEN系列产品后,又以久负盛名的”OM”机型为蓝本.诞生了数码时代的“OM”相机,这就是于2012年2月发布的微型可换镜头相机OM—DE—M5。这个名字有点长.不难看出“OM—D”有数码版OM相机的含义.此外E—M5属于微型4/3系统机型。

  17. Cloning and characterization of the gene encoding the PepF endopeptidase from the aquatic bacterium Caulobacter crescentus

    Directory of Open Access Journals (Sweden)

    Braz Vânia S.

    2002-01-01

    Full Text Available The metallopeptidases have a very important role in bacteria, being involved in several processes that rely on protein turnover, such as nutrition, degradation of signal peptides, protein localization and virulence. We have cloned and characterized the gene of the metalloendopeptidase PepF from the aquatic bacterium Caulobacter crescentus. The gene upstream of pepF (orf1 encodes a conserved hypothetical protein found in Mycobacterium and Streptomyces. pepF is co-transcribed with the gene downstream (orf3, which encodes a protein that belongs to the ABC1 protein kinase family, suggesting that these two proteins may share a common function in the cell. The C. crescentus PepF protein possesses the conserved HEXGH motif present in zinc binding domains of PepF homologs. Disruption of the pepF gene by insertion of a vector sequence did not produced any growth defect, but the mutant strain possesses only 30% of the specific activity of endopeptidases present in the wild type strain. Deletions and point mutations in the regulatory region showed that there are two putative promoter regions, and the operon expression is independent of the transcription regulator CtrA. The results indicate that PepF is not essential for either growth or development of this bacterium using peptides as the sole carbon source, suggesting that other peptidases can be sharing this function.

  18. Functional dissection of Streptococcus pyogenes M5 protein: the hypervariable region is essential for virulence.

    Directory of Open Access Journals (Sweden)

    Johan Waldemarsson

    Full Text Available The surface-localized M protein of Streptococcus pyogenes is a major virulence factor that inhibits phagocytosis, as determined ex vivo. Because little is known about the role of M protein in vivo we analyzed the contribution of different M protein regions to virulence, using the fibrinogen (Fg-binding M5 protein and a mouse model of acute invasive infection. This model was suitable, because M5 is required for mouse virulence and binds mouse and human Fg equally well, as shown here. Mixed infection experiments with wild type bacteria demonstrated that mutants lacking the N-terminal hypervariable region (HVR or the Fg-binding B-repeat region were strongly attenuated, while a mutant lacking the conserved C-repeats was only slightly attenuated. Because the HVR of M5 is not required for phagocytosis resistance, our data imply that this HVR plays a major but unknown role during acute infection. The B-repeat region is required for phagocytosis resistance and specifically binds Fg, suggesting that it promotes virulence by binding Fg. However, B-repeat mutants were attenuated even in Fg-deficient mice, implying that the B-repeats may have a second function, in addition to Fg-binding. These data demonstrate that two distinct M5 regions, including the HVR, are essential to virulence during the early stages of an infection. In particular, our data provide the first in vivo evidence that the HVR of an M protein plays a major role in virulence, focusing interest on the molecular role of this region.

  19. Holography of Wrapped M5-branes and Chern-Simons theory

    OpenAIRE

    Gang, Dongmin; Kim, Nakwoo; Lee, Sangmin

    2014-01-01

    We study three-dimensional superconformal field theories on wrapped M5-branes. Applying the gauge/gravity duality and the recently proposed 3d–3d relation, we deduce quantitative predictions for the perturbative free energy of a Chern–Simons theory on hyperbolic 3-space. Remarkably, the perturbative expansion is expected to terminate at two-loops in the large N limit. We check the correspondence numerically in a number of examples, and confirm the N3 scaling with precise coefficients.

  20. ZmPep1, an ortholog of Arabidopsis elicitor peptide 1, regulates maize innate immunity and enhances disease resistance.

    Science.gov (United States)

    Huffaker, Alisa; Dafoe, Nicole J; Schmelz, Eric A

    2011-03-01

    ZmPep1 is a bioactive peptide encoded by a previously uncharacterized maize (Zea mays) gene, ZmPROPEP1. ZmPROPEP1 was identified by sequence similarity as an ortholog of the Arabidopsis (Arabidopsis thaliana) AtPROPEP1 gene, which encodes the precursor protein of elicitor peptide 1 (AtPep1). Together with its receptors, AtPEPR1 and AtPEPR2, AtPep1 functions to activate and amplify innate immune responses in Arabidopsis and enhances resistance to both Pythium irregulare and Pseudomonas syringae. Candidate orthologs to the AtPROPEP1 gene have been identified from a variety of crop species; however, prior to this study, activities of the respective peptides encoded by these orthologs were unknown. Expression of the ZmPROPEP1 gene is induced by fungal infection and treatment with jasmonic acid or ZmPep1. ZmPep1 activates de novo synthesis of the hormones jasmonic acid and ethylene and induces the expression of genes encoding the defense proteins endochitinase A, PR-4, PRms, and SerPIN. ZmPep1 also stimulates the expression of Benzoxazineless1, a gene required for the biosynthesis of benzoxazinoid defenses, and the accumulation of 2-hydroxy-4,7-dimethoxy-1,4-benzoxazin-3-one glucoside in leaves. To ascertain whether ZmPep1-induced defenses affect resistance, maize plants were pretreated with the peptide prior to infection with fungal pathogens. Based on cell death and lesion severity, ZmPep1 pretreatment was found to enhance resistance to both southern leaf blight and anthracnose stalk rot caused by Cochliobolis heterostrophus and Colletotrichum graminicola, respectively. We present evidence that peptides belonging to the Pep family have a conserved function across plant species as endogenous regulators of innate immunity and may have potential for enhancing disease resistance in crops.

  1. Transport Mechanism of Oligopeptide Transporter PepT1 and Drug Absorption Mediated by PepT1%寡肽转运载体PepT1的转运机制及其介导的药物吸收

    Institute of Scientific and Technical Information of China (English)

    刘畅; 魏刚; 陆伟跃

    2013-01-01

    寡肽转运载体PepT1广泛分布于人和动物体内的多种器官和组织,其底物主要为蛋白水解后的二肽和三肽.本文综合文献,阐述PepT1的体内分布及其质子依赖型的转运机制,从空间结构的角度分析其对底物分子的选择性,介绍评价底物与PepT1二者间亲和活性的体内外模型及PepT1底物修饰策略在促进药物吸收方面的应用.%Oligopeptide transporter PepT1 is widely distributed in various organs and tissues of human and animals,which substrates are mainly proteolytic dipeptides and tripeptides.Based on a literature review,the in vivo distribution of PepT1 and its proton-dependent transport mechanism are introduced and the structure of the transporter and its selectivity on the substrate molecules are elucidated in this paper.In addition,several in vitro and in vivo models for evaluation of PepTl-mediated transportation as well as the applications of suvstrate modification strategies to drug absorption are also described.

  2. Does dropping day 5 PEP follow-up affect outcomes? An audit of HIV post-exposure prophylaxis at a central London sexual health clinic.

    Science.gov (United States)

    O'Keeffe, C; Nwokolo, N; McOwan, A; Whitlock, G

    2015-07-01

    UK post-exposure prophylaxis (PEP) guidelines were updated by the British Association for Sexual Health and HIV (BASHH) in 2011. In 2013, we changed policy to omit day 5 PEP follow-up at 56 Dean Street as it was felt clinically unnecessary. This audit compares our performance against BASHH standards for PEP attenders during June 2012 and June 2013. We identified 162 PEP prescriptions; PEP assessment and appropriate sexually transmitted infection testing was done well. PEP completion rates and post-PEP HIV testing were lower than BASHH standards. Following omission of day 5 review, documentation that results have been checked was poor; however, attendance at follow-up was not adversely affected.

  3. The IQ domains in neuromodulin and PEP19 represent two major functional classes.

    Science.gov (United States)

    Black, D J; LaMartina, David; Persechini, Anthony

    2009-12-15

    The affinities of Ca(2+)-saturated and Ca(2+)-free calmodulin for a fluorescent reporter construct containing the PEP19 IQ domain differ by a factor of approximately 100, with K(d) values of 11.0 +/- 1.2 and 1128.4 +/- 176.5 muM, respectively, while the affinities of a reporter containing the neuromodulin IQ domain are essentially identical, with K(d) values of 2.9 +/- 0.3 and 2.4 +/- 0.3 muM, respectively. When Ca(2+) is bound only to the C-terminal pair of Ca(2+)-binding sites in calmodulin, the K(d) value for the PEP19 reporter complex is decreased approximately 5-fold, while the value for the neuromodulin reporter complex is increased by the same factor. When Ca(2+) is bound only to the N-terminal pair of Ca(2+)-binding sites, the K(d) value for the PEP19 reporter complex is unaffected, but the value for the complex with the neuromodulin reporter is increased approximately 12-fold. These functional differences are largely ascribed to three differences in the CaM-binding sequences of the two reporters. Replacement of a central Gly in the neuromodulin IQ domain with a Lys at this position in PEP19 almost entirely accounts for the distinctive patterns of Ca(2+)-dependent stability changes exhibited by the two complexes. Replacement of a Lys immediately before the "IQ" amino acid pair in the neuromodulin sequence with the Ala in PEP19 accounts for the remaining Ca(2+)-dependent differences. Replacement of an Ala in the N-terminal half of the neuromodulin sequence with the Gln in PEP19 accounts for approximately half of the Ca(2+)-independent difference in the stabilities of the two reporter complexes, with the Ca(2+)-independent effect of the Lys replacement accounting for most of the remainder. Since the central Gly in the neuromodulin sequence is conserved in half of all known IQ domains, these results suggest that the presence or absence of this residue defines two major functional classes.

  4. Stem cells. m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation.

    Science.gov (United States)

    Geula, Shay; Moshitch-Moshkovitz, Sharon; Dominissini, Dan; Mansour, Abed AlFatah; Kol, Nitzan; Salmon-Divon, Mali; Hershkovitz, Vera; Peer, Eyal; Mor, Nofar; Manor, Yair S; Ben-Haim, Moshe Shay; Eyal, Eran; Yunger, Sharon; Pinto, Yishay; Jaitin, Diego Adhemar; Viukov, Sergey; Rais, Yoach; Krupalnik, Vladislav; Chomsky, Elad; Zerbib, Mirie; Maza, Itay; Rechavi, Yoav; Massarwa, Rada; Hanna, Suhair; Amit, Ido; Levanon, Erez Y; Amariglio, Ninette; Stern-Ginossar, Noam; Novershtern, Noa; Rechavi, Gideon; Hanna, Jacob H

    2015-02-27

    Naïve and primed pluripotent states retain distinct molecular properties, yet limited knowledge exists on how their state transitions are regulated. Here, we identify Mettl3, an N(6)-methyladenosine (m(6)A) transferase, as a regulator for terminating murine naïve pluripotency. Mettl3 knockout preimplantation epiblasts and naïve embryonic stem cells are depleted for m(6)A in mRNAs, yet are viable. However, they fail to adequately terminate their naïve state and, subsequently, undergo aberrant and restricted lineage priming at the postimplantation stage, which leads to early embryonic lethality. m(6)A predominantly and directly reduces mRNA stability, including that of key naïve pluripotency-promoting transcripts. This study highlights a critical role for an mRNA epigenetic modification in vivo and identifies regulatory modules that functionally influence naïve and primed pluripotency in an opposing manner.

  5. Zircaloy-4 and M5 high temperature oxidation and nitriding in air

    Energy Technology Data Exchange (ETDEWEB)

    Duriez, C. [Institut de Radioprotection et Surete Nucleaire, Direction de Prevention des Accidents Majeurs, Centre de Cadarache, 13115 St Paul Lez Durance (France)], E-mail: christian.duriez@irsn.fr; Dupont, T.; Schmet, B.; Enoch, F. [Universite Technologique de Troyes, BP 2060, 10010 Troyes (France)

    2008-10-15

    For the purpose of nuclear power plant severe accident analysis, degradation of Zircaloy-4 and M5 cladding tubes in air at high temperature was investigated by thermo-gravimetric analysis, in isothermal conditions, in a 600-1200 deg. C temperature range. Alloys were investigated either in a 'as received' bare state, or after steam pre-oxidation at 500 {sup o}C to simulate in-reactor corrosion. At the beginning of air exposure, the oxidation rate obeys a parabolic law, characteristic of solid-state diffusion limited regime. Parabolic rate constants compare, for Zircaloy-4 as well as for M5, with recently assessed correlations for high temperature Zircaloy-4 steam-oxidation. A thick layer of dense protective zirconia having a columnar structure forms during this diffusion-limited regime. Then, a kinetic transition (breakaway type) occurs, due to radial cracking along the columnar grain boundaries of this protective dense oxide scale. The breakaway is observed for a scale thickness that strongly increases with temperature. At the lowest temperatures, the M5 alloy appears to be breakaway-resistant, showing a delayed transition compared to Zircaloy-4. However, for both alloys, a pre-existing corrosion scale favours the transition, which occurs much earlier. The post transition kinetic regime is linear only for the lowest temperatures investigated. From 800 deg. C, a continuously accelerated regime is observed and is associated with formation of a strongly porous non-protective oxide. A mechanism of nitrogen-assisted oxide growth, involving formation and re-oxidation of ZrN particles, as well as nitrogen associated zirconia phase transformations, is proposed to be responsible for this accelerated degradation.

  6. Status of E-ELT M5 scale-one demonstrator

    Science.gov (United States)

    Barriga, Pablo; Sedghi, Babak; Dimmler, Martin; Kornweibel, Nick

    2014-07-01

    The fifth mirror of the European Extremely Large Telescope optical train is a field stabilization tip/tilt unit responsible for correcting the dynamical tip and tilt caused mainly by wind load on the telescope. A scale-one prototype including the inclined support, the fixed frame and a basic control system was designed and manufactured by NTE-SENER (Spain) and CSEM (Switzerland) as part of the prototyping and design activities. All interfaces to the mirror have been reproduced on a dummy structure reproducing the inertial characteristics of the optical element. The M5 unit is required to have sufficient bandwidth for tip/tilt reference commands coming from the wavefront control system. Such a bandwidth can be achieved using local active damping loop to damp the low frequency mechanical modes before closing a position loop. Prototyping on the M5 unit has been undertaken in order to demonstrate the E-ELT control system architecture, concepts and development standards and to further study active damping strategies. The control system consists of two nested loops: a local damping loop and a position loop. The development of this control system was undertaken following the E-ELT control system development standards in order to determine their applicability and performance and includes hardware selection, communication, synchronization, configuration, and data logging. In this paper we present the current status of the prototype M5 control system and the latest results on the active damping control strategy, in particular the promising results obtained with the method of positive position feedback.

  7. Holography of wrapped M5-branes and Chern–Simons theory

    Energy Technology Data Exchange (ETDEWEB)

    Gang, Dongmin [School of Physics, Korea Institute for Advanced Study, Seoul 130-722 (Korea, Republic of); Kim, Nakwoo [Department of Physics, Research Institute of Basic Science, Kyung Hee University, Seoul 130-701 (Korea, Republic of); Lee, Sangmin [Center for Theoretical Physics, College of Liberal Studies, Seoul National University, Seoul 151-742 (Korea, Republic of); School of Physics, Korea Institute for Advanced Study, Seoul 130-722 (Korea, Republic of)

    2014-06-02

    We study three-dimensional superconformal field theories on wrapped M5-branes. Applying the gauge/gravity duality and the recently proposed 3d–3d relation, we deduce quantitative predictions for the perturbative free energy of a Chern–Simons theory on hyperbolic 3-space. Remarkably, the perturbative expansion is expected to terminate at two-loops in the large N limit. We check the correspondence numerically in a number of examples, and confirm the N{sup 3} scaling with precise coefficients.

  8. New variables in M5 (NGC 5904) and some identification corrections

    CERN Document Server

    Ferro, A Arellano; Giridhar, S; Luna, A; Muneer, S

    2015-01-01

    We report twelve variables not previously detected in the globular cluster M5 (NGC 5904); one SX Phe and eleven semi-regular variables (SR). Their identifications, equatorial coordinates, ephemerides, and light curves are given. Furthermore, we have explored the light curves of a group of stars whose variability has not been confirmed and that are marked as probable non- variables in the CVSGC. Finally, we offer detailed identifications for some of the known variables in crowded regions that were misidentified in previous studies. We shall also address the cases of the cataclysmic variable or U Gem type V101 and of the variable blue straggler V159.

  9. PEP'87 Round Robin: Reference solar cells, mini modules, and modules. Internationaler Rundvergleich (PEP'87 Round Robin) an Referenz-Solarzellen, Minimodulen und Modulen

    Energy Technology Data Exchange (ETDEWEB)

    Metzdorf, J.; Wittchen, T.; Huenerhoff, D.; Nawo, B. (Physikalisch-Technische Bundesanstalt, Braunschweig (Germany, F.R.)); Heidler, K. (Fraunhofer-Institut fuer Solare Energiesysteme (ISE), Freiburg im Breisgau (Germany, F.R.))

    1990-01-01

    The aim of the research was to prepare, carry out and evaluate the second international all-round comparison of terrestrial reference solar cells and photovoltaic modules (PEP Round Robin) according to the 1985 resolution of the 'Photovoltaic Energy Project' (PEP) subgroup of the 'Technology, Growth and Employment' working group of the World Economic Summit of western industrialised nations. In line with IEC (International Electrotechnical Commission) recommendations, the following extensive aims were set: (i) comparison and assessment of the commonly used calibration methods in the western industrialised countries with regard to accuracy, reliability and applicability; (ii) trials of different embodiments of reference solar cells, firstly for their calibration capacity as 'reference solar cells' as such and secondly for their use as reference solar cells in the calibration of solar arrays; (iii) collection of data and experience reports to provide a basis for national standards on calibration methods and reference solar cells. (orig./ORU).

  10. The PEP-II Asymmetric B Factory: Design details and R&D results

    Energy Technology Data Exchange (ETDEWEB)

    Bloom, E.; DeStaebler, H.; Dorfan, J. [Stanford Linear Accelerator Center, Menlo Park, CA (United States)] [and others

    1994-06-01

    PEP-II, a 9 GeV {times} 3.1 GeV electron-positron collider with a design luminosity of 3 {times} 10{sup 33} cm{sup {minus}2}s{sup {minus}1} has now been approved for construction by SLAC, LBL and LLNL for the purpose of studying CP violation in the B{bar B} system. This upgrade project involves replacing the vacuum and RF systeum of PEP, which will serve as the high-energy ring (HER), along with the addition of a new low-energy ring (LER) mounted atop the HER. Designs for both rings are described, and the anticipated project construction schedule is indicated. Collider operation will begin at the end of 1998. An aggressive R&D program has been carried out to validate our design choices; key results in the areas of lattice design, vacuum, RF, and multibunch feedback are summarized.

  11. Noninvasive Prenatal Diagnosis of Fetal Sex by Single-cell PEP-PCR Method

    Institute of Scientific and Technical Information of China (English)

    王陶然; 陈汉平; 马庭元

    2004-01-01

    Summary: A new method for noninvasive prenatal diagnosis of fetal sex was developed by using single-cell PEP-PCR techniques. Micromamipulation techniques were used to obtain single fetal cells from 273 maternal blood samples. The genome of single cells was preamplified by PEP and SRY genes were analyzed by PCR method. The SRY genes of 149 samples were detected by the new method among 153 samples carrying male fetus, while 119 out of 120 samples carrying female fetus were proved negative for SRY genes. The sensitivity and specificity of the new method were 97.39% and 99.17 % respectively and the correct rate was 98.17 %. The new method has the advantage of high sensitivity and specificity in noninvasive prenatal diagnosis of fetal sex and provides the basis of other researches such as sex-linked inherited diseases.

  12. EFRT M12 Issue Resolution: Comparison of PEP and Bench-Scale Oxidative Leaching Results

    Energy Technology Data Exchange (ETDEWEB)

    Rapko, Brian M.; Brown, Christopher F.; Eslinger, Paul W.; Fountain, Matthew S.; Hausmann, Tom S.; Huckaby, James L.; Hanson, Brady D.; Kurath, Dean E.; Minette, Michael J.

    2009-08-14

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed and constructed and is to be operated as part of a plan to respond to issue M12, “Undemonstrated Leaching Processes.” The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing. Two operating scenarios are currently being evaluated for the ultrafiltration process (UFP) and leaching operations. The first scenario has caustic leaching performed in the UFP-2 ultrafiltration feed vessels (i.e., vessel UFP-VSL-T02A in the PEP; and vessels UFP-VSL-00002A and B in the WTP PTF). The second scenario has caustic leaching conducted in the UFP-1 ultrafiltration feed preparation vessels (i.e., vessels UFP-VSL-T01A and B in the PEP; vessels UFP-VSL-00001A and B in the WTP PTF). In both scenarios, 19-M sodium hydroxide solution (NaOH, caustic) is added to the waste slurry in the vessels to dissolve solid aluminum compounds (e.g., gibbsite, boehmite). Caustic addition is followed by a heating step that uses direct steam injection to accelerate the leaching process. Following the caustic leach, the vessel contents are cooled using vessel cooling jackets and/or external heat exchangers. The main difference between the two scenarios is that for leaching in UFP1, the 19-M NaOH is added to un-concentrated waste slurry (3 to 8 wt% solids), while for leaching in UFP2, the slurry is concentrated to nominally

  13. Study of an instability of the PEP-II positron beam (Ohmi effect and Multipactoring)

    Energy Technology Data Exchange (ETDEWEB)

    Heifets, S.A. [Stanford Linear Accelerator Center, Menlo Park, CA (United States)

    1996-08-01

    The processes defining the density distribution of the photoelectrons are quite complicated. In this study, a simplified model of the instability was used to get a quick estimate of the growth rate of the instability and the relative importance of the parameters, as has been done in Ohmi`s paper. The production rate and dynamics of the photoelectrons are studied for the PEP-II parameters. The growth rate of the transverse instability driven by the primary photoelectrons is of the order of 0.7 msec for the PEP-II parameters. The multipactoring at resonance currents cannot produce large electron density due to the final energy spread caused by the finite bunch length and the intrinsic energy spread of the secondary electrons. Production of the secondary electrons may lead to large average densities. The ion can be produced in electron collisions with the residual gas with density of the order of the electron density. (G.K.)

  14. Radiosynthesis of a new PSMA targeting ligand ([{sup 18}F]FPy-DUPA-Pep)

    Energy Technology Data Exchange (ETDEWEB)

    Malik, Noeen, E-mail: noeen.malik@uniklinik-ulm.d [Clinic for Nuclear Medicine, University Hospital, Ulm (Germany); Machulla, Hans-Juergen; Solbach, Christoph; Winter, Gordon; Reske, Sven N.; Zlatopolskiy, Boris [Clinic for Nuclear Medicine, University Hospital, Ulm (Germany)

    2011-07-15

    Due to the specificity of expression of PSMA (prostate specific membrane antigen) particularly in prostate cancer cells (e.g. LNCaP), numerous PSMA ligands have been synthesized until now. In the current study, we synthesized DUPA-Pep having 2-[3-(1,3-dicarboxypropyl)ureido]pentanedioic acid (DUPA) linked via 8-aminooctanoic acid to two phenylalanine residues and chose 6-[{sup 18}F]fluoronicotinic acid 2,3,5,6-tetrafluorophenyl ester [{sup 18}F]FPy-TFP as a prosthetic group for coupling. [{sup 18}F]FPy-DUPA-Pep was obtained in a radiochemical yield of 48{+-}0.9% (decay uncorrected) within 50 min with a chemical purity of >98%.

  15. Final Design And Manufacturing of the PEP II High Energy Ring Arc Bellows Module

    Energy Technology Data Exchange (ETDEWEB)

    Kurita, Nadine R.; Kulikov, Artem; /SLAC; Corlett, John; /LBL, Berkeley

    2011-09-01

    A novel RF shield bellows module developed at SLAC has been successfully manufactured and installed in the PEP-II High Energy Ring (HER). Tests indicate that the module meets its performance and operational requirements. The primary function of the bellows module is to allow for thermal expansion of the chambers and for lateral, longitudinal and angular offsets due to tolerances and alignment, while providing RF continuity between adjoining chambers. An update on the Arc bellows module for the PEP-II High Energy Ring is presented. Final design, manufacturing issues, material and coating selection, and tribological and RF testing are discussed. Performance and operational requirements are also reviewed. The RF shield design has been proven during assembly to allow for large manufacturing tolerances without reducing the mechanical spring force below required values. In addition, the RF shield maintains electrical contact even with large misalignments across the module.

  16. Partial etch phase (PEP) optical elements for high-volume applications

    Science.gov (United States)

    Mossberg, T. W.; Hannigan, J. M.; Iazikov, D.

    2017-02-01

    Using binary etch and sub-wavelength DUV photolithography, we have designed and fabricated a variety of flat optical devices (lenses, vortex phase plates, vortex plus lens, and diffusers) useful in telecommunications and other areas. The devices provide the precision and low cost associated with modern semi-conductor manufacturing and offer unique functional performance. Since the design method involves selective binary removal of substrate material we designate derivative devices partial etch phase (PEP) devices. Design principles and fabricated device performance are described.

  17. Mesomorphic phase behaviour of low molar mass PEP-PDMS diblock copolymers synthesized by anionic polymerization

    Energy Technology Data Exchange (ETDEWEB)

    Vigild, M.E.

    1997-10-01

    The phase behaviour of low molar mass poly(ethylene-alt-propylene) -poly(dimethylsiloxane) (PEP-PDMS) is investigated in this thesis by the combination of dynamical mechanical spectroscopy (rheology) to measure phase transition temperatures, and small-angle x-ray scattering to identify the morphology of encountered phases. Samples of PEP-PDMS in the range of 0.2-0.7 in volume fraction of PEP are studied. This diblock copolymer system exhibits the three classical phases of lamellar sandwich structure (LAM), hexagonally packed cylinders (HEX), and spheres arranged on a body centered cubic lattice (BCC). Furthermore the gyroid phase (Ia3d symmetry) of two interpenetrating networks was also identified as a stable phase of the PEP-PDMS system. Time resolved measurements of small-angle neutron scattering in tandem with simultaneous in-situ rheological measurements are performed on samples showing transitions between different ordered phases. The identification of especially the BCC and gyroid phases from scattering experiments is treated. By performing mesoscopic crystallographic measurements using a custom built goniometer it was unambiguously shown that the application of shear to an unoriented powder-like sample introduces uniaxial orientation of the gyroid phase. The orientation of the ordered phase is otherwise random, causing a two-dimensional powder. Finally this dissertation presents a discussion of relevant parameters for the description of diblock copolymer phase behaviour together with descriptions of anionic polymerization for the synthesis of copolymers, and various experimental techniques for the characterization of diblocks. (au). 9 tabs., 40 ills., 81 refs.

  18. Modeling Lost-Particle Accelerator Backgrounds in PEP-II Using LPTURTLE

    CERN Document Server

    Fieguth, Theodore; Kozanecki, Witold

    2005-01-01

    Background studies during the design, construction, commissioning, operation and improvement of BaBar and PEP-II have been greatly influenced by results from a program referred to as LPTURTLE (Lost Particle TURTLE a modified version of Decay TURTLE) which was originally conceived for the purpose of studying gas background for SLC. This venerable program is still in use today. We describe its use, capabilities and improvements and refer to current results now being applied to BaBar.

  19. Pep2Path: automated mass spectrometry-guided genome mining of peptidic natural products.

    Directory of Open Access Journals (Sweden)

    Marnix H Medema

    2014-09-01

    Full Text Available Nonribosomally and ribosomally synthesized bioactive peptides constitute a source of molecules of great biomedical importance, including antibiotics such as penicillin, immunosuppressants such as cyclosporine, and cytostatics such as bleomycin. Recently, an innovative mass-spectrometry-based strategy, peptidogenomics, has been pioneered to effectively mine microbial strains for novel peptidic metabolites. Even though mass-spectrometric peptide detection can be performed quite fast, true high-throughput natural product discovery approaches have still been limited by the inability to rapidly match the identified tandem mass spectra to the gene clusters responsible for the biosynthesis of the corresponding compounds. With Pep2Path, we introduce a software package to fully automate the peptidogenomics approach through the rapid Bayesian probabilistic matching of mass spectra to their corresponding biosynthetic gene clusters. Detailed benchmarking of the method shows that the approach is powerful enough to correctly identify gene clusters even in data sets that consist of hundreds of genomes, which also makes it possible to match compounds from unsequenced organisms to closely related biosynthetic gene clusters in other genomes. Applying Pep2Path to a data set of compounds without known biosynthesis routes, we were able to identify candidate gene clusters for the biosynthesis of five important compounds. Notably, one of these clusters was detected in a genome from a different subphylum of Proteobacteria than that in which the molecule had first been identified. All in all, our approach paves the way towards high-throughput discovery of novel peptidic natural products. Pep2Path is freely available from http://pep2path.sourceforge.net/, implemented in Python, licensed under the GNU General Public License v3 and supported on MS Windows, Linux and Mac OS X.

  20. The PEP-II Project: Low-Energy Ring Design and Project Status

    Energy Technology Data Exchange (ETDEWEB)

    Zisman, Michael S.

    2006-01-02

    We describe the present status of the PEP-II project. The project comprises four major systems: Injector, High-Energy Ring (HER), Low-Energy Ring (LER), and Interaction Region (IR). We focus in detail on the design of the LER, as its parameters and requirements are most closely related to those required for the Beijing Tau-Charm Factory rings. The PEP-II LER is a high-current, 3.1-GeV positron ring mounted above the 9-GeV HER. The LER uses a wiggler located in one of its six straight sections to provide emittance control and additional damping. We describe the rather complicated IR, which must transport the LER beam into the plane of the HER, focus it to a common beam size, and separate the beams after the head-on collisions. Both permanent magnet and conventional electromagnets are used in this area. The LER lattice has now adopted a simplified non-interleaved sextupole correction scheme that has reduced the required number of sextupoles substantially. We describe the LER vacuum system, one of the most challenging subsystems in PEP-II. It employs several technologies. In the arcs, aluminum extrusions and titanium sublimation pumps are employed; the straight sections use stainless steel chambers with lumped ion pumps. In the wiggler area, an extended copper photon dump with nonevaporable getter (NEG) pumps is employed to handle the very large synchrotron radiation power. The design of the room-temperature RF system, the bunch-by-bunch longitudinal and transverse feedback systems, and some of the special diagnostics will be described briefly. The PEP-II project remains on schedule to begin commissioning of the HER in April 1997, followed by the LER a year later.

  1. A New Overview of Secular Period Changes of RR Lyrae stars inM5

    CERN Document Server

    Ferro, A Arellano; Kains, N; Luna, A

    2016-01-01

    Secular period variations, $\\beta=\\dot{P}$, in 76 RR Lyrae stars in the globular cluster M5 are analysed using our most recent CCD $V$ photometry and the historical photometric database available in the literature since 1889. This provides a time baseline of up to 118 years for these variables. The analysis was performed using two independent approaches: first, the classical $O-C$ behaviour of the time of maximum light, and second, via a grid $(P,\\beta)$, where the solution producing the minimum scatter in the phased light curve is chosen. The results of the two methods agree satisfactorily. This allowed a new interpretation of the nature of the period changes in many RR Lyrae stars in M5. It is found that in $96\\%$ of the stars studied no irregular or stochastic variations need to be claimed, but that $66\\%$ of the population shows steady period increases or decreases, and that $34\\%$ of the periods seem to have been stable over the last century. The lack of systematic positive or negative period variations ...

  2. Forecasting Shaharchay River Flow in Lake Urmia Basin using Genetic Programming and M5 Model Tree

    Directory of Open Access Journals (Sweden)

    S. Samadianfard

    2017-01-01

    Full Text Available Introduction: Precise prediction of river flows is the key factor for proper planning and management of water resources. Thus, obtaining the reliable methods for predicting river flows has great importance in water resource engineering. In the recent years, applications of intelligent methods such as artificial neural networks, fuzzy systems and genetic programming in water science and engineering have been grown extensively. These mentioned methods are able to model nonlinear process of river flows without any need to geometric properties. A huge number of studies have been reported in the field of using intelligent methods in water resource engineering. For example, Noorani and Salehi (23 presented a model for predicting runoff in Lighvan basin using adaptive neuro-fuzzy network and compared the performance of it with neural network and fuzzy inference methods in east Azerbaijan, Iran. Nabizadeh et al. (21 used fuzzy inference system and adaptive neuro-fuzzy inference system in order to predict river flow in Lighvan river. Khalili et al. (13 proposed a BL-ARCH method for prediction of flows in Shaharchay River in Urmia. Khu et al. (16 used genetic programming for runoff prediction in Orgeval catchment in France. Firat and Gungor (11 evaluated the fuzzy-neural model for predicting Mendes river flow in Turkey. The goal of present study is comparing the performance of genetic programming and M5 model trees for prediction of Shaharchay river flow in the basin of Lake Urmia and obtaining a comprehensive insight of their abilities. Materials and Methods: Shaharchay river as a main source of providing drinking water of Urmia city and agricultural needs of surrounding lands and finally one of the main input sources of Lake Urmia is quite important in the region. For obtaining the predetermined goals of present study, average monthly flows of Shaharchay River in Band hydrometric station has been gathered from 1951 to 2011. Then, two third of mentioned

  3. M5C2 carbide precipitates in a high-Cr martensitic steel

    Science.gov (United States)

    Shen, Yinzhong; Ji, Bo; Zhou, Xiaoling

    2014-05-01

    The precipitate phases in an advanced 11% Cr martensitic steel, expected to be used at 650 °C, have been investigated to understand the effect of precipitates on the creep-rupture strength of the steel. M23C6 and MX precipitates were dominant phases in this steel. Needle-like precipitates with a typical length of 180 nm and width of 20 nm; and metallic-element compositions of 53-74Fe, 16-26Cr, 3-18Ta, 2-8W, and 2-4Co (at%); were observed mainly within the martensite laths of the normalized-and-tempered steel. The needle-like precipitates have been identified as monoclinic carbide M5C2, which is not known to have been reported previously in high chromium steels, or in heat-resistant steels those have been normalized-and-tempered. This indicates that the formation of M5C2 carbides can occur in heat-resistant steels produced under appropriate tempering conditions, and that this does not require long-term isothermal aging or creep testing, in all cases.

  4. EFRT M-12 Issue Resolution: Caustic-Leach Rate Constants from PEP and Laboratory-Scale Tests

    Energy Technology Data Exchange (ETDEWEB)

    Mahoney, Lenna A.; Rassat, Scot D.; Eslinger, Paul W.; Aaberg, Rosanne L.; Aker, Pamela M.; Golovich, Elizabeth C.; Hanson, Brady D.; Hausmann, Tom S.; Huckaby, James L.; Kurath, Dean E.; Minette, Michael J.; Sundaram, S. K.; Yokuda, Satoru T.

    2010-01-01

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed and operated as part of a plan to respond to issue M12, “Undemonstrated Leaching Processes” of the External Flowsheet Review Team (EFRT) issue response plan.( ) The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing. The work described in this report addresses caustic leaching under WTP conditions, based on tests performed with a Hanford waste simulant. Because gibbsite leaching kinetics are rapid (gibbsite is expected to be dissolved by the time the final leach temperature is reached), boehmite leach kinetics are the main focus of the caustic-leach tests. The tests were completed at the laboratory-scale and in the PEP, which is a 1/4.5-scale mock-up of key PTF process equipment. Two laboratory-scale caustic-leach tests were performed for each of the PEP runs. For each PEP run, unleached slurry was taken from the PEP caustic-leach vessel for one batch and used as feed for both of the corresponding laboratory-scale tests.

  5. Letter of intent for the study of CP violation and heavy flavor physics at PEP-II

    Energy Technology Data Exchange (ETDEWEB)

    BaBar Collaboration

    1994-06-18

    This report discusses the following topics on CP violation and heavy flavor physics experiments: Physics at PEP-II; detector overview; PEP-II and the interaction region; vertex detector; main tracking chamber; particle identification; electromagnetic calorimeter; muon and neutral hadron detector; magnet coil and flux return; electronics, trigger, and data acquisition; computing; CP asymmetry simulations; collaboration issues; project organization and management; and budget and schedule.

  6. A Parallel Controls Software Approach for PEP II: AIDA & Matlab Middle Layer

    Energy Technology Data Exchange (ETDEWEB)

    Wittmer, W.; Colocho, W.; White, G.; /SLAC

    2007-11-06

    The controls software in use at PEP II (Stanford Control Program - SCP) had originally been developed in the eighties. It is very successful in routine operation but due to its internal structure it is difficult and time consuming to extend its functionality. This is problematic during machine development and when solving operational issues. Routinely, data has to be exported from the system, analyzed offline, and calculated settings have to be reimported. Since this is a manual process, it is time consuming and error-prone. Setting up automated processes, as is done for MIA (Model Independent Analysis), is also time consuming and specific to each application. Recently, there has been a trend at light sources to use MATLAB as the platform to control accelerators using a 'MATLAB Middle Layer' (MML), and so called channel access (CA) programs to communicate with the low level control system (LLCS). This has proven very successful, especially during machine development time and trouble shooting. A special CA code, named AIDA (Accelerator Independent Data Access), was developed to handle the communication between MATLAB, modern software frameworks, and the SCP. The MML had to be adapted for implementation at PEP II. Colliders differ significantly in their designs compared to light sources, which poses a challenge. PEP II is the first collider at which this implementation is being done. We will report on this effort, which is still ongoing.

  7. First evidence of pep solar neutrinos by direct detection in Borexino

    CERN Document Server

    ,

    2011-01-01

    We observed, for the first time, solar neutrinos in the 1.0-1.5 MeV energy range. We measured the rate of pep solar neutrino interactions in Borexino to be [3.1+-0.6(stat)+-0.3(syst)] counts/(day x 100 ton) and provided a constraint on the CNO solar neutrino interaction rate of <7.9 counts/(day x 100 ton) (95% C.L.). The absence of the solar neutrino signal is disfavored at 99.97% C.L., while the absence of the pep signal is disfavored at 98% C.L. This unprecedented sensitivity was achieved by adopting novel data analysis techniques for the rejection of cosmogenic 11C, the dominant background in the 1-2 MeV region. Assuming the MSW-LMA solution to solar neutrino oscillations, these values correspond to solar neutrino fluxes of [1.6+-0.3]x10^8 cm^-2s-1 and 7.7x10^8 cm^-2s-1 (95% C.L.), respectively, in agreement with the Standard Solar Model. These results represent the first measurement of the pep neutrino flux and the strongest constraint of the CNO solar neutrino flux to date.

  8. The pep4 gene encoding proteinase A is involved in dimorphism and pathogenesis of Ustilago maydis.

    Science.gov (United States)

    Soberanes-Gutiérrez, Cinthia V; Juárez-Montiel, Margarita; Olguín-Rodríguez, Omar; Hernández-Rodríguez, César; Ruiz-Herrera, José; Villa-Tanaca, Lourdes

    2015-10-01

    Vacuole proteases have important functions in different physiological processes in fungi. Taking this aspect into consideration, and as a continuation of our studies on the analysis of the proteolytic system of Ustilago maydis, a phytopathogenic member of the Basidiomycota, we have analysed the role of the pep4 gene encoding the vacuolar acid proteinase PrA in the pathogenesis and morphogenesis of the fungus. After confirmation of the location of the protease in the vacuole using fluorescent probes, we obtained deletion mutants of the gene in sexually compatible strains of U. maydis (FB1 and FB2), and analysed their phenotypes. It was observed that the yeast to mycelium dimorphic transition induced by a pH change in the medium, or the use of a fatty acid as sole carbon source, was severely reduced in Δpep4 mutants. In addition, the virulence of the mutants in maize seedlings was reduced, as revealed by the lower proportion of plants infected and the reduction in size of the tumours induced by the pathogen, when compared with wild-type strains. All of these phenotypic alterations were reversed by complementation of the mutant strains with the wild-type gene. These results provide evidence of the importance of the pep4 gene for the morphogenesis and virulence of U. maydis.

  9. Detection of Instrumental Drifts in the PEP II LER BPM System

    Energy Technology Data Exchange (ETDEWEB)

    Wittmer, W.; Fisher, A.S.; Martin, D.J.; Sebek, J.J.; /SLAC

    2007-11-07

    During the last PEP-II run a major goal was to bring the Low-Energy Ring optics as close as possible to the design. A large number of BPMs exhibited sudden artificial jumps that interfered with this effort. The source of the majority of these jumps had been traced to the filter-isolator boxes (FIBs) near the BPM buttons. A systematic approach to find and repair the failing units had been developed and implemented. Despite this effort, the instrumental orbit jumps never completely disappeared. To trace the source of this behavior a test setup, using a spare Bergoz MX-BPM processor (kindly provided by SPEAR III at SSRL), was connected in parallel to various PEP-II BPM processors. In the course of these measurements a slow instrumental orbit drift was found which was clearly not induced by a moving positron beam. Based on the size of the system and the limited time before PEP-II closes in Oct.2008, an accelerator improvement project was initiated to install BERGOZ BPM-MX processors close to all sextupoles.

  10. Measurements and Analysis of Longitudinal HOM Driven Coupled Bunch Modes in PEP-II Rings

    Energy Technology Data Exchange (ETDEWEB)

    Mastorides, T; Rivetta, C.; Fox, J.D.; Winkle, D.Van; /SLAC

    2008-07-07

    The growth rates of the longitudinal higher-order impedance-driven beam modes have greatly increased since the initial PEP-II design and commissioning. This increase is attributed to the addition of 6 1.2MW RF stations with 8 accelerating cavities in the HER and 2 1.2MW RF stations with 4 accelerating cavities in the LER, which allowed operations at twice the design current and almost four times the luminosity. As a result, the damping requirements for the longitudinal feedback have greatly increased since the design, and the feedback filters and control schemes have evolved during PEP-II operations. In this paper, growth and damping rate data for the higher-order mode (HOM) driven coupled-bunch modes are presented from various PEP-II runs and are compared with historical estimates during commissioning. The effect of noise in the feedback processing channel is also studied. Both the stability and performance limits of the system are analyzed.

  11. Pep1, a secreted effector protein of Ustilago maydis, is required for successful invasion of plant cells.

    Directory of Open Access Journals (Sweden)

    Gunther Doehlemann

    2009-02-01

    Full Text Available The basidiomycete Ustilago maydis causes smut disease in maize. Colonization of the host plant is initiated by direct penetration of cuticle and cell wall of maize epidermis cells. The invading hyphae are surrounded by the plant plasma membrane and proliferate within the plant tissue. We identified a novel secreted protein, termed Pep1, that is essential for penetration. Disruption mutants of pep1 are not affected in saprophytic growth and develop normal infection structures. However, Deltapep1 mutants arrest during penetration of the epidermal cell and elicit a strong plant defense response. Using Affymetrix maize arrays, we identified 116 plant genes which are differentially regulated in Deltapep1 compared to wild type infections. Most of these genes are related to plant defense. By in vivo immunolocalization, live-cell imaging and plasmolysis approaches, we detected Pep1 in the apoplastic space as well as its accumulation at sites of cell-to-cell passages. Site-directed mutagenesis identified two of the four cysteine residues in Pep1 as essential for function, suggesting that the formation of disulfide bridges is crucial for proper protein folding. The barley covered smut fungus Ustilago hordei contains an ortholog of pep1 which is needed for penetration of barley and which is able to complement the U. maydis Deltapep1 mutant. Based on these results, we conclude that Pep1 has a conserved function essential for establishing compatibility that is not restricted to the U. maydis / maize interaction.

  12. Aerodynamics configuration conceptual design for ATLLAS-M6 analog transport aircraft%类 ATLLAS-M6运输机气动布局分析与设计

    Institute of Scientific and Technical Information of China (English)

    肖光明; 冯毅; 唐伟; 桂业伟

    2012-01-01

    根据德国宇航中心设计的ATLLAS-M6运输机的气动布局特点,利用基于类型函数和形状函数的CST方法对其进行了参数化建模,并初步计算分析了该外形的主要气动特性,包括配平特性、静/动稳定性以及控制面的控制效率等.研究结果表明,类ATLLAS-M6的气动性能基本满足高超声速运输机的设计要求,其气动布局方案是可以借鉴的.在此基础上,将进一步考虑运输机结构重量、热防护性能等对布局的约束,对其外形进行多学科优化设计.%The aerodynamic configuration study of ATLLAS-M6 transport aircraft proposed by the German Aerospace Center (DLR) is presented and discussed. The ATLLAS-M6 has a turbine-based combined cycle (TBCC) propulsion system, and it's aerodynamic configuration has the following characteristics: double delta-wing with low-aspect ratio, axial vertical tail, high-set horizontal tail and lifting body with high-fineness ratio. In this paper, a parameterized configuration is proposed via the "class function and shape function transformation technique" (CST) method. The aerodynamic characteristics are investigated, such as the trim characteristic, static/dynamic stability and control efficiency of control surfaces. The detail research indicated that the ATLLAS-M6 analog has a high hypersonic lift to drag ratio at the cruise state of low trimming angle of attack. The hypersonic stability derivatives predicted by the " dahlem-buck" method and the "prandtl-meyer" method shown that the transporter is static and dynamic stable in both lateral and directional directions and the proposed configuration is one of the feasible transporter choices. Yet, the aerodynamic configuration conceptual design of the hypersonic transport aircraft is a highly integrated project, several disciplines involved must be considered farther, such as structured materials and thermal protection system. Therefore, the "multidisciplinary design optimization" (MDO) method

  13. Increased amphetamine-induced locomotor activity, sensitization, and accumbal dopamine release in M5 muscarinic receptor knockout mice

    DEFF Research Database (Denmark)

    Schmidt, Lene S; Miller, Anthony D; Lester, Deranda B

    2010-01-01

    showed that M(5) receptor knockout (M (5) (-/-) ) mice are less sensitive to the reinforcing properties of addictive drugs. MATERIALS AND METHODS: Here, we investigate the role of M(5) receptors in the effects of amphetamine and cocaine on locomotor activity, locomotor sensitization, and dopamine release...... using M (5) (-/-) mice backcrossed to the C57BL/6NTac strain. STATISTICAL ANALYSES: Sensitization of the locomotor response is considered a model for chronic adaptations to repeated substance exposure, which might be related to drug craving and relapse. The effects of amphetamine on locomotor activity......-induced hyperactivity and dopamine release as well as amphetamine sensitization are enhanced in mice lacking the M(5) receptor. These results support the concept that the M(5) receptor modulates effects of addictive drugs....

  14. Neutrino and axion bounds from the globular cluster M5 (NGC 5904).

    Science.gov (United States)

    Viaux, N; Catelan, M; Stetson, P B; Raffelt, G G; Redondo, J; Valcarce, A A R; Weiss, A

    2013-12-06

    The red-giant branch (RGB) in globular clusters is extended to larger brightness if the degenerate helium core loses too much energy in "dark channels." Based on a large set of archival observations, we provide high-precision photometry for the Galactic globular cluster M5 (NGC 5904), allowing for a detailed comparison between the observed tip of the RGB with predictions based on contemporary stellar evolution theory. In particular, we derive 95% confidence limits of g(ae)axion-electron coupling and μ(ν)<4.5×10(-12)μ(B) (Bohr magneton μ(B)=e/2m(e)) on a neutrino dipole moment, based on a detailed analysis of statistical and systematic uncertainties. The cluster distance is the single largest source of uncertainty and can be improved in the future.

  15. Higher Derivative Corrections and Central Charges from Wrapped M5-branes

    CERN Document Server

    Baggio, Marco; Mayerson, Daniel R; Robbins, Daniel; Wecht, Brian

    2014-01-01

    We compute four-derivative corrections to the AdS supergravity actions arising from the near-horizon geometry of N M5-branes wrapped on either one or two Riemann surfaces. This setup features the novel presence of both gauged isometries as well as nontrivial hypermultiplets. We argue that the 5d Chern-Simons terms receive not only higher-derivative corrections but also contributions from Killing vector parameters, which we find must also be corrected. We check the central charges found by our supergravity methods against the dual field theory results and find perfect agreement at leading and subleading order in N. Along the way, we find higher derivative corrections to general AdS_5 and AdS_3x\\Sigma_g geometries.

  16. Witten indices of abelian M5 brane on $\\mathbb{R}\\times S^5$

    CERN Document Server

    Bak, Dongsu

    2016-01-01

    Witten indices and partition functions are computed for abelian 6d tensor and hypermultiplets on $\\mathbb{R}\\times S^5$ in Lorentzian signature in an R gauge field background which preserves some supersymmetry. We consider a generic supersymmetric squashing that also admits squashing of the Hopf fiber. Wick rotation to Euclidean M5 brane amounts to Wick rotation of squashing parameters and the hypermultiplet mass parameter. We compute Casimir energies for tensor and hypermultiplets separately for general squashing, and match these with the corresponding gravitational anomaly polynomials. We extract Witten indices on $\\mathbb{R}\\times \\mathbb{CP}^2$ and find that this is zero, again matching with the vanishing anomaly polynomial on an odd dimensional space.

  17. Geomechanical modeling of the nucleation process of Australia's 1989 M5.6 Newcastle earthquake

    Science.gov (United States)

    Klose, Christian D.

    2007-04-01

    Inherent to black-coal mining in New South Wales (Australia) since 1801, the discharge of ground water may have triggered the M5.6 Newcastle earthquake in 1989. 4-dimensional geomechanical model simulations reveal that widespread water removal and coal as deep as a 500 m depth resulted in an unload of the Earth's crust. This unload caused a destabilization process of the pre-existing Newcastle fault in the interior of the crust beneath the Newcastle coal field. In tandem, an increase in shear stress and a decrease in normal stress may have reactivated this reverse fault. Over the course of the last fifty years, elevated levels of lithostatic stress alterations have accelerated. In 1991, based on the modeling of the crust's elastostatic response to the unload, there has been the minimal critical shear stress changes of 0.01 Mega Pascal (0.1 bar) that reached the Newcastle fault at a depth where the 1989 mainshock nucleated. Hence, it can be anticipated that other faults might also be critically stressed in that region for a couple of reasons. First, the size of the area (volume) that is affected by the induced stress changes is larger than the ruptured area of the Newcastle fault. Second, the seismic moment magnitude of the 1989 M5.6 Newcastle earthquake is associated with only a fraction of mass removal (1 of 55), following McGarr's mass-moment relationship. Lastly, these findings confirm ongoing seismicity in the Newcastle region since the beginning of the 19th century after a dormant period of 10,000 years of no seismicity.

  18. EFRT M-12 Issue Resolution: Comparison of Filter Performance at PEP and CUF Scale

    Energy Technology Data Exchange (ETDEWEB)

    Daniel, Richard C.; Billing, Justin M.; Bontha, Jagannadha R.; Brown, Christopher F.; Eslinger, Paul W.; Hanson, Brady D.; Huckaby, James L.; Karri, Naveen K.; Kimura, Marcia L.; Kurath, Dean E.; Minette, Michael J.

    2009-08-13

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed and constructed and is to be operated as part of a plan to respond to issue M12, Undemonstrated Leaching Processes. The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing. Two operating scenarios are currently being evaluated for the ultrafiltration process (UFP) and leaching operations. The first scenario has caustic leaching performed in the UFP-2 ultrafiltration feed vessels (i.e., vessel UFP-VSL-T02A in the PEP and vessels UFP-VSL-00002A and B in the WTP PTF). The second scenario has caustic leaching conducted in the UFP-1 ultrafiltration feed-preparation vessels (i.e., vessels UFP-VSL-T01A and B in the PEP; vessels UFP-VSL-00001A and B in the WTP PTF). In both scenarios, 19-M sodium hydroxide solution (NaOH, caustic) is added to the waste slurry in the vessels to leach solid aluminum compounds (e.g., gibbsite, boehmite). Caustic addition is followed by a heating step that uses direct injection of steam to accelerate the leach process. Following the caustic leach, the vessel contents are cooled using vessel cooling jackets and/or external heat exchangers. The main difference between the two scenarios is that for leaching in UFP1, the 19-M NaOH is added to un-concentrated waste slurry (3 to 8 wt% solids), while for leaching in UFP2, the slurry is concentrated to nominally 20 wt

  19. EFRT M-12 Issue Resolution: Caustic Leach Rate Constants from PEP and Laboratory-Scale Tests

    Energy Technology Data Exchange (ETDEWEB)

    Mahoney, Lenna A.; Rassat, Scot D.; Eslinger, Paul W.; Aaberg, Rosanne L.; Aker, Pamela M.; Golovich, Elizabeth C.; Hanson, Brady D.; Hausmann, Tom S.; Huckaby, James L.; Kurath, Dean E.; Minette, Michael J.; Sundaram, S. K.; Yokuda, Satoru T.

    2009-08-14

    Testing Summary Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed and constructed and is to be operated as part of a plan to respond to issue M12, “Undemonstrated Leaching Processes.” The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing. Two operating scenarios are currently being evaluated for the ultrafiltration process (UFP) and leaching operations. The first scenario has caustic leaching performed in the UFP-2 ultrafiltration feed vessels (i.e., vessel UFP-VSL-T02A in the PEP and vessels UFP-VSL-00002A and B in the WTP PTF). The second scenario has caustic leaching conducted in the UFP-1 ultrafiltration feed preparation vessels (i.e., vessels UFP-VSL-T01A and B in the PEP; vessels UFP-VSL-00001A and B in the WTP PTF). In both scenarios, 19-M sodium hydroxide solution (NaOH, caustic) is added to the waste slurry in the vessels to leach solid aluminum compounds (e.g., gibbsite, boehmite). Caustic addition is followed by a heating step that uses direct injection of steam to accelerate the leaching process. Following the caustic leach, the vessel contents are cooled using vessel cooling jackets and/or external heat exchangers. The main difference between the two scenarios is that for leaching in UFP-1, the 19-M NaOH is added to un-concentrated waste slurry (3 to 8 wt% solids), while for leaching in UFP-2, the slurry is

  20. Characterization of the radiation environment at the UNLV accelerator facility during operation of the Varian M6 linac

    Science.gov (United States)

    Hodges, M.; Barzilov, A.; Chen, Y.; Lowe, D.

    2016-10-01

    The bremsstrahlung photon flux from the UNLV particle accelerator (Varian M6 model) was determined using MCNP5 code for 3 MeV and 6 MeV incident electrons. Human biological equivalent dose rates due to accelerator operation were evaluated using the photon flux with the flux-to-dose conversion factors. Dose rates were computed for the accelerator facility for M6 linac use under different operating conditions. The results showed that the use of collimators and linac internal shielding significantly reduced the dose rates throughout the facility. It was shown that the walls of the facility, in addition to the earthen berm enveloping the building, provide equivalent shielding to reduce dose rates outside to below the 2 mrem/h limit.

  1. Calculation of the Rate of M>6.5 Earthquakes for California and Adjacent Portions of Nevada and Mexico

    Science.gov (United States)

    Frankel, Arthur; Mueller, Charles

    2008-01-01

    One of the key issues in the development of an earthquake recurrence model for California and adjacent portions of Nevada and Mexico is the comparison of the predicted rates of earthquakes with the observed rates. Therefore, it is important to make an accurate determination of the observed rate of M>6.5 earthquakes in California and the adjacent region. We have developed a procedure to calculate observed earthquake rates from an earthquake catalog, accounting for magnitude uncertainty and magnitude rounding. We present a Bayesian method that corrects for the effect of the magnitude uncertainty in calculating the observed rates. Our recommended determination of the observed rate of M>6.5 in this region is 0.246 ? 0.085 (for two sigma) per year, although this rate is likely to be underestimated because of catalog incompleteness and this uncertainty estimate does not include all sources of uncertainty.

  2. PEP NSEFC Module 3 Unit 2 Healthy eating: Reading and Writing%PEP NSEFC Module3Unit2Healthy eating: Reading and Writing

    Institute of Scientific and Technical Information of China (English)

    盛晓

    2011-01-01

    @@ 一、教学课型:读写技能整合课 英语读写技能整合课是PEP NSEFC Using language分重要课型之一.该课型基于阅读文本解读,又超越文本信息重构新的文本.教学过程以读、写为主,听、说为辅,从信息输入到信息加工处理,最后到信息的输出,真正着眼于"提高学生用英语获取信息、处理信息、分析问题和解决问题的能力,特别注重提高学生用英语进行思维和表达的能力".

  3. Intermediate states on the way to edge-sharing BO4 tetrahedra in M6B22O39·H2O (M=Fe, Co).

    Science.gov (United States)

    Neumair, Stephanie C; Knyrim, Johanna S; Oeckler, Oliver; Glaum, Robert; Kaindl, Reinhard; Stalder, Roland; Huppertz, Hubert

    2010-12-10

    The new borates Fe(II)(6)B(22)O(39)·H(2)O (colourless) and Co(II)(6)B(22)O(39)·H(2)O (dichroic: red/bluish) were synthesised under the high-pressure/high-temperature conditions of 6 GPa and 880 °C (Fe)/950 °C (Co) in a Walker-type multi-anvil apparatus. The compounds crystallise in the orthorhombic space group Pmn2(1) (Z=2) with the lattice parameters a=771.9(2), b=823.4(2), c=1768.0(4) pm, V=1.1237(4) nm(3), R(1)=0.0476, wR(2)=0.0902 (all data) for Fe(6)B(22)O(39)·H(2)O and a=770.1(2), b=817.6(2), c=1746.9(4) pm, V=1.0999(4) nm(3), R(1)=0.0513, wR(2)=0.0939 (all data) for Co(6)B(22)O(39)·H(2)O. The new structure type of M(6)B(22)O(39)·H(2)O (M=Fe, Co) is built up from corner-sharing BO(4) tetrahedra and BO(3) groups, the latter being distorted and close to BO(4) tetrahedra if additional oxygen atoms of the neighbouring BO(4) tetrahedra are considered in the coordination sphere. This situation can be regarded as an intermediate state in the formation of edge-sharing tetrahedra. The structure consists of corrugated multiple layers interconnected by BO(3)/BO(4) groups to form Z-shaped channels. Inside these channels, iron and cobalt show octahedral (M1, M3, M4, M5) and strongly distorted tetrahedral (M2, M6) coordination by oxygen atoms. Co(II)(6)B(22)O(39)·H(2)O is dichroic and the low symmetry of the chromophore [Co(II)O(4)] is reflected by the polarised absorption spectra (Δ(t)=4650 cm(-1), B=878 cm(-1)).

  4. Over-expression of GSH1 gene and disruption of PEP4 gene in self-cloning industrial brewer's yeast.

    Science.gov (United States)

    Wang, Zhao-Yue; He, Xiu-Ping; Zhang, Bo-Run

    2007-11-01

    Foam stability is often influenced by proteinase A, and flavor stability is often affected by oxidation during beer storage. In this study, PEP4, the gene coding for proteinase A, was disrupted in industrial brewing yeast. In the meantime, one copy of GSH1 gene increased in the same strain. GSH1 is responsible for gamma-glutamylcysteine synthetase, a rate-limiting enzyme for synthesis of glutathione which is one kind of important antioxidant and beneficial to beer flavor stability. In order to improve the brewer's yeast, plasmid pYPEP, pPC and pPCG1 were firstly constructed, which were recombined plasmids with PEP4 gene, PEP4's disruption and PEP4's disruption+GSH1 gene respectively. These plasmids were verified to be correct by restriction enzymes' assay. By digesting pPCG1 with AatII and PstI, the DNA fragment for homologous recombination was obtained carrying PEP4 sequence in the flank and GSH1 gene internal to the fragment. Since self-cloning technique was applied in the study and the modified genes were from industrial brewing yeast itself, the improved strains, self-cloning strains, were safe to public. The genetic stability of the improved strains was 100%. The results of PCR analysis of genome DNA showed that coding sequence of PEP4 gene had been deleted and GSH1 gene had been inserted into the locus of PEP4 gene in self-cloning strains. The fermentation ability of self-cloning strain, SZ-1, was similar to that of the host. Proteinase A could not be detected in beer brewed with SZ-1, and GSH content in the beer increased 35% compared to that of the host, Z-1.

  5. PEP1 of Arabis alpina is encoded by two overlapping genes that contribute to natural genetic variation in perennial flowering.

    Directory of Open Access Journals (Sweden)

    Maria C Albani

    Full Text Available Higher plants exhibit a variety of different life histories. Annual plants live for less than a year and after flowering produce seeds and senesce. By contrast perennials live for many years, dividing their life cycle into episodes of vegetative growth and flowering. Environmental cues control key check points in both life histories. Genes controlling responses to these cues exhibit natural genetic variation that has been studied most in short-lived annuals. We characterize natural genetic variation conferring differences in the perennial life cycle of Arabis alpina. Previously the accession Pajares was shown to flower after prolonged exposure to cold (vernalization and only for a limited period before returning to vegetative growth. We describe five accessions of A. alpina that do not require vernalization to flower and flower continuously. Genetic complementation showed that these accessions carry mutant alleles at PERPETUAL FLOWERING 1 (PEP1, which encodes a MADS box transcription factor orthologous to FLOWERING LOCUS C in the annual Arabidopsis thaliana. Each accession carries a different mutation at PEP1, suggesting that such variation has arisen independently many times. Characterization of these alleles demonstrated that in most accessions, including Pajares, the PEP1 locus contains a tandem arrangement of a full length and a partial PEP1 copy, which give rise to two full-length transcripts that are differentially expressed. This complexity contrasts with the single gene present in A. thaliana and might contribute to the more complex expression pattern of PEP1 that is associated with the perennial life-cycle. Our work demonstrates that natural accessions of A. alpina exhibit distinct life histories conferred by differences in PEP1 activity, and that continuous flowering forms have arisen multiple times by inactivation of the floral repressor PEP1. Similar phenotypic variation is found in other herbaceous perennial species, and our results

  6. EnVision M5 Venus Orbiter Proposal: Opportunities and Challenges

    Science.gov (United States)

    Ghail, Richard; Wilson, Colin F.; Widemann, Thomas

    2016-10-01

    The core goal of EnVision is to detect activity and measure rates of change on Venus, including geological and geochemical cycles involving the interior, surface and atmosphere.It will observe >20% of the surface with all instruments and will obtain gravity and emissivity data globally. The instrument suite for M5 is under review but will likely comprise the same three instruments as at M4: VenSAR, VEM and SRS.VenSAR. The largest payload instrument is a phased array S-band radar, developed from the UK's low-cost NovaSAR-S instrument optimized for Venus. Use of spacecraft pointing for side-looking, instead of a fixed slant, simplifies the observation strategy to three pairs of ~9 minute/orbit (~36° latitude, ~3800 km) pass-to-pass InSAR swaths, two ~9 minute/orbit multipolar (HH-HV-VV) swaths at lower incidence angle for stereo mapping, two ~3 minute/orbit (~12° latitude, ~1300 km) high resolution swath and 1 to 2 S-band emissivity swaths per day plus 50 km2 ~1 m resolution sliding spotlight images. In addition, InSAR will be acquired along a narrow equatorial strip and across the North Pole to measure variability in the spin rate and axis.VEM. The Venus Emissivity Mapper suite comprises two UV and IR spectrometer channels in addition to the VEM-M IR mapping. A filter array provides wavelength stability and maximizes signal to the focal plane array (FPA). VEM-H is high-resolution, nadir-pointing, infrared spectrometer, the ideal instrument to enable characterization of volcanic plumes released from the surface of Venus by observing SO2, H2O and HDO through the 1 µm, 1.7 µm, and 2-2.3 µm atmospheric windows. Specifically, VEM-H is a redesign of the LNO (Limb, Nadir and Occultation) channel of NOMAD, retaining much heritage from the original with minor modifications to meet the science objectives of the M5 EnVision mission. The third channel, VEM-UV is an upper-atmosphere UV spectrometer dedicated to global SO2 & sulfur cycles.SRS. The Subsurface Radar Sounder

  7. Observations of static Coulomb stress triggering of the November 2011 M5.7 Oklahoma earthquake sequence

    Science.gov (United States)

    Sumy, Danielle F.; Cochran, Elizabeth S.; Keranen, Katie M.; Wei, Maya; Abers, Geoffrey A.

    2014-01-01

    In November 2011, a M5.0 earthquake occurred less than a day before a M5.7 earthquake near Prague, Oklahoma, which may have promoted failure of the mainshock and thousands of aftershocks along the Wilzetta fault, including a M5.0 aftershock. The M5.0 foreshock occurred in close proximity to active fluid injection wells; fluid injection can cause a buildup of pore fluid pressure, decrease the fault strength, and may induce earthquakes. Keranen et al. [2013] links the M5.0 foreshock with fluid injection, but the relationship between the foreshock and successive events has not been investigated. Here we examine the role of coseismic Coulomb stress transfer on earthquakes that follow the M5.0 foreshock, including the M5.7 mainshock. We resolve the static Coulomb stress change onto the focal mechanism nodal plane that is most consistent with the rupture geometry of the three M ≥ 5.0 earthquakes, as well as specified receiver fault planes that reflect the regional stress orientation. We find that Coulomb stress is increased, e.g., fault failure is promoted, on the nodal planes of ~60% of the events that have focal mechanism solutions, and more specifically, that the M5.0 foreshock promoted failure on the rupture plane of the M5.7 mainshock. We test our results over a range of effective coefficient of friction values. Hence, we argue that the M5.0 foreshock, induced by fluid injection, potentially triggered a cascading failure of earthquakes along the complex Wilzetta fault system.

  8. RR Lyrae stars and the horizontal branch of NGC 5904 (M5)

    CERN Document Server

    Ferro, A Arellano; Bramich, D M; Giridhar, Sunetra; Ahumada, J A; Muneer, S

    2016-01-01

    We report the distance and [Fe/H] value for the globular cluster NGC 5904 (M5) derived from the Fourier decomposition of the light curves of selected RRab and RRc stars. The aim in doing this was to bring these parameters into the homogeneous scales established by our previous work on numerous other globular clusters, allowing a direct comparison of the horizontal branch luminosity in clusters with a wide range of metallicities. Our CCD photometry of the large variable star population of this cluster is used to discuss light curve peculiarities, like Blazhko modulations, on an individual basis. New Blazhko variables are reported. From the RRab stars we found [Fe/H]$_{\\rm UVES} = -1.335 \\pm 0.003{\\rm(statistical)} \\pm 0.110{\\rm(systematic)}$, and a distance of $7.6\\pm 0.2$ kpc, and from the RRc stars we found [Fe/H]$_{\\rm UVES}$ = $-1.39 \\pm 0.03{\\rm(statistical)} \\pm 0.12{\\rm(systematic)}$ and a distance of $7.5 \\pm 0.3$ kpc. The results for RRab and RRc stars should be considered independent since they come ...

  9. Wavelet coupled MARS and M5 Model Tree approaches for groundwater level forecasting

    Science.gov (United States)

    Rezaie-balf, Mohammad; Naganna, Sujay Raghavendra; Ghaemi, Alireza; Deka, Paresh Chandra

    2017-10-01

    In this study, two different machine learning models, Multivariate Adaptive Regression Splines (MARS) and M5 Model Trees (MT) have been applied to simulate the groundwater level (GWL) fluctuations of three shallow open wells within diverse unconfined aquifers. The Wavelet coupled MARS and MT hybrid models were developed in an attempt to further increase the GWL forecast accuracy. The Discrete Wavelet Transform (DWT) which is particularly effective in dealing with non-stationary time-series data was employed to decompose the input time series into various sub-series components. Historical data of 10 years (August-1996 to July-2006) comprising monthly groundwater level, rainfall, and temperature were used to calibrate and validate the models. The models were calibrated and tested for one, three and six months ahead forecast horizons. The wavelet coupled MARS and MT models were compared with their simple counterpart using standard statistical performance evaluation measures such as Root Mean Square Error (RMSE), Normalized Nash-Sutcliffe Efficiency (NNSE) and Coefficient of Determination (R2) . The wavelet coupled MARS and MT models developed using multi-scale input data performed better compared to their simple counterpart and the forecast accuracy of W-MARS models were superior to that of W-MT models. Specifically, the DWT offered a better discrimination of non-linear and non-stationary trends that were present at various scales in the time series of the input variables thus crafting the W-MARS models to provide more accurate GWL forecasts.

  10. Lithium abundances in globular cluster giants: NGC 6218 (M12) and NGC 5904 (M5)

    CERN Document Server

    D'Orazi, Valentina; Gratton, Raffaele G; Lattanzio, John C; Bragaglia, Angela; Carretta, Eugenio; Lucatello, Sara; Momany, Yazan

    2014-01-01

    Convergent lines of evidence suggest that globular clusters host multiple stellar populations. It appears that they experience at least two episodes of star formation whereby a fraction of first-generation stars contribute astrated ejecta to form the second generation(s). To identify the polluting progenitors we require distinguishing chemical signatures such as that provided by lithium. Theoretical models predict that lithium can be synthesised in AGB stars, whereas no net Li production is expected from other candidates. It has been shown that in order to reproduce the abundance pattern found in M4, Li production must occur within the polluters, favouring the AGB scenario. Here we present Li and Al abundances for a large sample of RGB stars in M12 and M5. These clusters have a very similar metallicity, whilst demonstrating differences in several cluster properties. Our results indicate that the first-generation and second-generation stars share the same Li content in M12; we recover an abundance pattern simi...

  11. The intrinsic extreme ultraviolet fluxes of F5 V to M5 V stars

    Energy Technology Data Exchange (ETDEWEB)

    Linsky, Jeffrey L. [JILA, University of Colorado and NIST, 440UCB Boulder, CO 80309-0440 (United States); Fontenla, Juan [NorthWest Research Associates Inc., 3380 Mitchell Ln, Boulder, CO 80301 (United States); France, Kevin, E-mail: jlinsky@jilau1.colorado.edu, E-mail: jfontenla@nwra.com, E-mail: Kevin.France@colorado.edu [CASA, University of Colorado, 593UCB Boulder, CO 80309-0593 (United States)

    2014-01-01

    Extreme ultraviolet (EUV) radiations (10-117 nm) from host stars play important roles in the ionization, heating, and mass loss from exoplanet atmospheres. Together with the host star's Lyα and far-UV (117-170 nm) radiation, EUV radiation photodissociates important molecules, thereby changing the chemistry in exoplanet atmospheres. Since stellar EUV fluxes cannot now be measured and interstellar neutral hydrogen completely obscures stellar radiation between 40 and 91.2 nm, even for the nearest stars, we must estimate the unobservable EUV flux by indirect methods. New non-LTE semiempirical models of the solar chromosphere and corona and solar irradiance measurements show that the ratio of EUV flux in a variety of wavelength bands to the Lyα flux varies slowly with the Lyα flux and thus with the magnetic heating rate. This suggests and we confirm that solar EUV/Lyα flux ratios based on the models and observations are similar to the available 10-40 nm flux ratios observed with the Extreme Ultraviolet Explorer (EUVE) satellite and the 91.2-117 nm flux observed with the Far Ultraviolet Spectroscopic Explorer (FUSE) satellite for F5 V-M5 V stars. We provide formulae for predicting EUV flux ratios based on the EUVE and FUSE stellar data and on the solar models, which are essential input for modeling the atmospheres of exoplanets.

  12. A New Tomato Hybrid 'Jinpeng M6' with Resistance to Meloidogyne incognita%抗南方根结线虫番茄新品种‘金棚M6

    Institute of Scientific and Technical Information of China (English)

    李晓东; 郑丽芳; 王建人; 巩振辉; 蔡义勇; 李永宁; 任向辉

    2012-01-01

    ‘金棚M6’番茄是以‘M6’为母本,‘13B’为父本杂交培育的无限生长类型一代杂种。植株生长势较强,叶片较稀。果实高圆形,幼果无绿肩。成熟果粉红色,无棱沟,着色均匀一致,光泽度好。果肉厚,果实硬度好,耐贮耐运,货架期长。高抗南方根结线虫,高抗番茄花叶病毒(ToMV),中抗黄瓜花叶病毒(CMV),抗枯萎病和叶霉病。适宜日光温室、大棚等保护地春提早、越冬及秋冬春一大茬栽培。早熟,春提早种植前期产量可达52500kg·hm-2,春季栽培总产量一般为127500-150000kg·hm-2。%'Jinpeng M6' is a new indeterminate growth type and pink tomato hybrid, which is developed by crossing 'M6' x ' 13B' . The hybrid grows strongly and has spare foliage. Fruits are highly round in shape, and young fruits have no green shoulder. Its matured fruit is pink, has a smooth peel, uniform colour and high glossiness. The fruit has thick pulp, big fruit core, long storability and shelf-life. The hybrid is highly resistant to Meloidogyne incognita and ToMV, moderately resistant to CMV, fusarium wilt and leaf mould. It is suitable for cultivation in early spring, overwinter and one big crop of autumn-winter-spring under greenhouse conditions. It is early ripening, the early yield is 52 500 kg · hm-2 in early spring, the total yield is about 127 500 - 150 000 kg·hm-2 in spring.

  13. Positive Emotions Program for Schizophrenia (PEPS): a pilot intervention to reduce anhedonia and apathy.

    Science.gov (United States)

    Favrod, Jérôme; Nguyen, Alexandra; Fankhauser, Caroline; Ismailaj, Alban; Hasler, Jean-David; Ringuet, Abel; Rexhaj, Shyhrete; Bonsack, Charles

    2015-09-29

    Recent literature has distinguished the negative symptoms associated with a diminished capacity to experience (apathy, anhedonia) from symptoms associated with a limited capacity for expression (emotional blunting, alogia). The apathy-anhedonia syndrome tends to be associated with a poorer prognosis than the symptoms related to diminished expression. The efficacy of drug-based treatments and psychological interventions for these symptoms in schizophrenia remains limited. There is a clear clinical need for new treatments. This pilot study tested the feasibility of a program to reduce anhedonia and apathy in schizophrenia and assessed its impact on 37 participants meeting the ICD-10 criteria for schizophrenia or schizoaffective disorders. Participants were pre- and post-tested using the Scale for the Assessment of Negative Symptoms (SANS) and the Calgary Depression Scale for Schizophrenia (CDSS). They took part in eight sessions of the Positive Emotions Program for Schizophrenia (PEPS)--an intervention that teaches participants skills to help overcome defeatist thinking and to increase the anticipation and maintenance of positive emotions. Thirty-one participants completed the program; those who dropped out did not differ from completers. Participation in the program was accompanied by statistically significant reductions in the total scores for Avolition-Apathy and Anhedonia-Asociality on the SANS, with moderate effect sizes. Furthermore, there was a statistically significant reduction of depression on the CDSS, with a large effect size. Emotional blunting and alogia remain stable during the intervention. Findings indicate that PEPS is both a feasible intervention and is associated with an apparently specific reduction of anhedonia and apathy. However, these findings are limited by the absence of control group and the fact that the rater was not blind to the treatment objectives. PEPS is a promising intervention to improve anhedonia and apathy which need to be

  14. Review. The mammalian proton-coupled peptide cotransporter PepT1: sitting on the transporter-channel fence?

    Science.gov (United States)

    Meredith, David

    2009-01-27

    The proton-coupled di- and tripeptide transporter PepT1 (SLC15a1) is the major route by which dietary nitrogen is taken up from the small intestine, as well as being the route of entry for important therapeutic (pro)drugs such as the beta-lactam antibiotics, angiotensin-converting enzyme inhibitors and antiviral and anti-cancer agents. PepT1 is a member of the major facilitator superfamily of 12 transmembrane domain transporter proteins. Expression studies in Xenopus laevis on rabbit PepT1 that had undergone site-directed mutagenesis of a conserved arginine residue (arginine282 in transmembrane domain 7) to a glutamate revealed that this residue played a role in the coupling of proton and peptide transport and prevented the movement of non-coupled ions during the transporter cycle. Mutations of arginine282 to other non-positive residues did not uncouple proton-peptide cotransport, but did allow additional ion movements when substrate was added. By contrast, mutations to positive residues appeared to function the same as wild-type. These findings are discussed in relation to the functional role that arginine282 may play in the way PepT1 operates, together with structural information from the homology model of PepT1 based on the Escherichia coli lactose permease crystal structure.

  15. PEP-SiteFinder: a tool for the blind identification of peptide binding sites on protein surfaces.

    Science.gov (United States)

    Saladin, Adrien; Rey, Julien; Thévenet, Pierre; Zacharias, Martin; Moroy, Gautier; Tufféry, Pierre

    2014-07-01

    Peptide-protein interactions are important to many processes of life, particularly for signal transmission or regulatory mechanisms. When no information is known about the interaction between a protein and a peptide, it is of interest to propose candidate sites of interaction at the protein surface, to assist the design of biological experiments to probe the interaction, or to serve as a starting point for more focused in silico approaches. PEP-SiteFinder is a tool that will, given the structure of a protein and the sequence of a peptide, identify protein residues predicted to be at peptide-protein interface. PEP-SiteFinder relies on the 3D de novo generation of peptide conformations given its sequence. These conformations then undergo a fast blind rigid docking on the complete protein surface, and we have found, as the result of a benchmark over 41 complexes, that the best poses overlap to some extent the experimental patch of interaction for close to 90% complexes. In addition, PEP-SiteFinder also returns a propensity index we have found informative about the confidence of the prediction. The PEP-SiteFinder web server is available at http://bioserv.rpbs.univ-paris-diderot.fr/PEP-SiteFinder.

  16. Effects of Polymorphisms in Pepsinogen (PEP, Amylase (AMY and Trypsin (TRY Genes on Food Habit Domestication Traits in Mandarin Fish

    Directory of Open Access Journals (Sweden)

    Tilin Yi

    2013-10-01

    Full Text Available Mandarin fish (Siniperca chuatsi have a peculiar feeding habit of only accepting live fish prey and refusing dead prey and artificial diets. However, previous research has shown that some individuals accept dead prey after gradual domestication. Digestive enzymes are correlated with feeding habits in fish. In the current study, SNPs in the mandarin fish genes for pepsinogen (PEP, amylase (AMY, and trypsin (TRY were evaluated for associations with feeding habits in domesticated mandarin fish by scanning their complete genomic sequence. In total, two SNPs were found in PEP, one was found in TRY, and none were found in AMY. The D1(CTCC and D5(TTTT diplotypes in the PEP gene tended to show strong effects on the feeding habits of domesticated fish (p < 0.01. The results indicate that PEP may be associated with the genetic mechanism for feeding habits in mandarin fish, and the D1(CTCC and D5(TTTT diplotypes in the PEP gene may be useful markers for selecting mandarin fish with appropriate feeding habits for domestication.

  17. Effects of polymorphisms in pepsinogen (PEP), amylase (AMY) and trypsin (TRY) genes on food habit domestication traits in mandarin fish.

    Science.gov (United States)

    Yi, Tilin; Sun, Jian; Liang, Xufang; He, Shan; Li, Ling; Wen, Zhengyong; Shen, Dan

    2013-10-30

    Mandarin fish (Siniperca chuatsi) have a peculiar feeding habit of only accepting live fish prey and refusing dead prey and artificial diets. However, previous research has shown that some individuals accept dead prey after gradual domestication. Digestive enzymes are correlated with feeding habits in fish. In the current study, SNPs in the mandarin fish genes for pepsinogen (PEP), amylase (AMY), and trypsin (TRY) were evaluated for associations with feeding habits in domesticated mandarin fish by scanning their complete genomic sequence. In total, two SNPs were found in PEP, one was found in TRY, and none were found in AMY. The D1(CTCC) and D5(TTTT) diplotypes in the PEP gene tended to show strong effects on the feeding habits of domesticated fish (p < 0.01). The results indicate that PEP may be associated with the genetic mechanism for feeding habits in mandarin fish, and the D1(CTCC) and D5(TTTT) diplotypes in the PEP gene may be useful markers for selecting mandarin fish with appropriate feeding habits for domestication.

  18. Beam-size effect and particle losses at B-factories KEKB and PEP-II

    Energy Technology Data Exchange (ETDEWEB)

    Kotkin, G.L.; Serbo, V.G. E-mail: serbo@math.nsc.ru

    2005-01-01

    In the colliders, the macroscopically large impact parameters give a substantial contribution to the standard cross section of the e{sup +}e{sup -}{yields}e{sup +}e{sup -}{gamma} process. These impact parameters may be much larger than the transverse sizes of the colliding bunches. It means that the standard cross section of this process has to be substantially modified. In the present paper such a beam-size effect is calculated for bremsstrahlung at B-factories KEKB and PEP-II. We find out that this effect reduces beam losses due to bremsstrahlung by about 20%.

  19. Operating Performance of the Low Group Delay Woofer Channel in PEP-II

    CERN Document Server

    Teytelman, Dmitry; Van Winkle, Daniel

    2005-01-01

    In PEP-II collider a dedicated low group-delay processing channel has been developed in order to provide high damping rates necessary to control the fast-growing longitudinal eigenmodes driven by the fundamental impedances of the RF cavities. A description of the digital processing channel operating at 9.81 MHz and capable of supporting finite impulse response (FIR) controllers with up to 32 taps will be presented. A prototype system has been successfully commissioned in the High-Energy Ring (HER) in May 2004. Operating experiences with the prototype and the newly determined limits on achievable longitudinal damping will be discussed and illustrated with experimental data.

  20. The galactic globular cluster M5 (NGC 5904 as a particle physics laboratory

    Directory of Open Access Journals (Sweden)

    Redondo J.

    2013-03-01

    Full Text Available Globular clusters have been used for a long time to test stellar evolution theories, and in particular to constrain novel forms of energy loss in low-mass stars. This includes constraints on axion properties, neutrino dipole moments, milli-charged particles, Kaluza-Klein gravitons, and many other phenomena. Depending on their interaction strength, these particles can be abundantly produced in stellar interiors, escape without further interaction, and thus drain energy directly from the stellar interior. Hence, they contribute directly to the stellar energy losses, thus modifying stellar evolution. Our goal is to re-examine such constraints in the light of modern data and updated stellar evolution codes, paying particular attention to systematic and statistical errors. As a first example, we consider the case of a neutrino magnetic moment that enhances the energy loss from the plasma process. In terms of the observed color-magnitude diagrams, the tip of the red giant branch (RGB has been identified as a sensitive observable of the effects of the energy losses due to a neutrino magnetic moment. Here we describe the consequences of adding the cooling effect due to a neutrino magnetic moment to the Princeton-Goddard-PUC (PGPUC stellar evolution code, exploring in particular the dependence of the position of the RGB tip on the neutrino magnetic moment. As a first application, we studied the position of the observed RGB tip in the case of the Galactic globular cluster M5 (NGC 5904, using the latest, high-precision, ground-based data from the P. B. Stetson database (2012, priv. comm.. We compare the empirical results with the PGPUC model predictions, and discuss the implied constraints on the value of the neutrino magnetic moment.

  1. Stress-based aftershock forecasting: the 2008 M=7.9 Wenchuan, and 2013 M=6.6 Lushan earthquakes

    Science.gov (United States)

    Parsons, T.

    2013-12-01

    Immediately after the 12 May 2008 M=7.9 Wenchuan earthquake, static stress change calculations were made on the on major faults surrounding the rupture zone. The purpose was two-fold: (1) to identify the most likely locations (stress increases) of dangerous aftershocks, and (2) to conduct a prospective test of stress mapping as a rapid-response forecast tool. The occurrence of the 20 April M=6.6 Lushan earthquake in the Longmen fault zone near Ya'an was consistent with the static stress forecast, but a formal evaluation of the post Wenchuan forecast performance was not favorable because the anticipated aftershock distribution was violated, with clear seismicity rate increases in stress shadow zones. Here I look at reconciling these results and ask the question, are static stress change calculations more applicable to larger aftershocks? A single case such as the Wenchuan-Lushan pairing could readily be a coincidence, so I look at additional large continental earthquakes and their aftershock magnitude relations. Results show (1) the most probable place that high magnitude aftershocks will occur is in areas with the highest aftershock activity, (2) high magnitude aftershocks are most likely to happen where stress change calculations are greatest, and (3) high magnitude aftershocks are most likely to happen on well developed fault zones. All three of these points are fairly obvious, but a conclusion that can be drawn from the 2008 M=7.9 Wenchuan and 2013 M=6.6 Lushon pair is that all three are necessary considerations. The location of the 2013 M=6.6 Lushon earthquake was consistent with stress change calculations, although there was virtually no precursory activity in the immediate vicinity. Therefore a forecast based only on elevated activity rates would not have anticipated its location.

  2. High Performance Liquid Chromatography of Propellants. Part 1. Analysis of M1, M6, and M10 Propellants

    Science.gov (United States)

    1986-05-01

    High performance liquid chromatography permits the differentation among the stabilizers and their degradation products together with accurate quantitation. This progress report describes work carried out in the analysis of single base propellants containing diphenylamine (DPA) as the stabilizer. Several degradation products have been identified and the routine determination of these compounds is feasible. The degradation of DPA seems to follow a pattern that is unique for M1 and M6’s as compared to the pattern for M10’s. It is postulated

  3. AthMethPre: a web server for the prediction and query of mRNA m(6)A sites in Arabidopsis thaliana.

    Science.gov (United States)

    Xiang, Shunian; Yan, Zhangming; Liu, Ke; Zhang, Yaou; Sun, Zhirong

    2016-10-18

    N(6)-Methyladenosine (m(6)A) is the most prevalent and abundant modification in mRNA that has been linked to many key biological processes. High-throughput experiments have generated m(6)A-peaks across the transcriptome of A. thaliana, but the specific methylated sites were not assigned, which impedes the understanding of m(6)A functions in plants. Therefore, computational prediction of mRNA m(6)A sites becomes emergently important. Here, we present a method to predict the m(6)A sites for A. thaliana mRNA sequence(s). To predict the m(6)A sites of an mRNA sequence, we employed the support vector machine to build a classifier using the features of the positional flanking nucleotide sequence and position-independent k-mer nucleotide spectrum. Our method achieved good performance and was applied to a web server to provide service for the prediction of A. thaliana m(6)A sites. The server also provides a comprehensive database of predicted transcriptome-wide m(6)A sites and curated m(6)A-seq peaks from the literature for query and visualization. The AthMethPre web server is the first web server that provides a user-friendly tool for the prediction and query of A. thaliana mRNA m(6)A sites, which is freely accessible for public use at .

  4. Power Extension Package (PEP) system definition extension, orbital service module systems analysis study. Volume 1: Executive summary

    Science.gov (United States)

    1979-01-01

    An array deployment assembly, power regulation and control assembly, the necessary interface, and display and control equipment comprise the power extension package (PEP) which is designed to provide increased power and duration, as well as reduce fuel cell cryogen consumption during Spacelab missions. Compatible with all currently defined missions and payloads, PEP imposes minimal weight and volume penalties on sortie missions, and can be installed and removed as needed at the launch site within the normal Orbiter turnaround cycle. The technology on which it is based consists of a modified solar electric propulsion array, standard design regulator and control equipment, and a minimally modified Orbiter design. The requirements from which PEP was derived, and the system and its performance capabilities are described. Features of the recommended project are presented.

  5. Development of the Positive Emotions Program for Schizophrenia (PEPS: an intervention to improve pleasure and motivation in schizophrenia

    Directory of Open Access Journals (Sweden)

    Alexandra eNguyen

    2016-02-01

    Full Text Available Objectives: The efficacy of drug-based treatments and psychological interventions on the primary negative symptoms of schizophrenia remains limited. Recent literature has distinguished negative symptoms associated with a diminished capacity to experience, from those associated with a limited capacity for expression. The Positive Emotions Program for Schizophrenia (PEPS is a new method that specifically aims to reduce the syndrome of a diminished capacity to experience. Methods: The intervention’s vital ingredients were identified through a literature review of emotion in schizophrenia and positive psychology. The program has been beta-tested on various groups of healthcare professionals. Results: A detailed description of the final version of PEPS is presented here. The French version of the program is freely downloadable. Conclusions: PEPS is a specific, short, easy to use, group-based intervention to improve pleasure and motivation in schizophrenia. It was built considering a recovery-oriented approach to schizophrenia.

  6. Cryptococcal osteomyelitis and meningitis in a patient with non-hodgkin's lymphoma treated with PEP-C.

    Science.gov (United States)

    To, Christina A; Hsieh, Robert W; McClellan, James Scott; Howard, Walter; Fischbein, Nancy J; Brown, Janice M Y; Felsher, Dean W; Fan, Alice C

    2012-09-07

    The authors present the first case report of a patient with lymphoma who developed disseminated cryptococcal osteomyelitis and meningitis while being treated with the PEP-C (prednisone, etoposide, procarbazine and cyclophosphamide) chemotherapy regimen. During investigation of fever and new bony lesions, fungal culture from a rib biopsy revealed that the patient had cryptococcal osteomyelitis. Further evaluation demonstrated concurrent cryptococcal meningitis. The patient's disseminated cryptococcal infections completely resolved after a full course of antifungal treatment. Cryptococcal osteomyelitis is itself an extremely rare diagnosis, and the unique presentation with concurrent cryptococcal meningitis in our patient with lymphoma was likely due to his PEP-C treatment. It is well recognised that prolonged intensive chemotherapeutic regimens place patients at risk for atypical infections; yet physicians should recognise that even chronic low-dose therapies can put patients at risk for fungal infections. Physicians should consider fungal infections as part of the infectious investigation of a lymphopaenic patient on PEP-C.

  7. Cryptococcal osteomyelitis and meningitis in a patient with non-hodgkin’s lymphoma treated with PEP-C

    Science.gov (United States)

    To, Christina A; Hsieh, Robert W; McClellan, James Scott; Howard, Walter; Fischbein, Nancy J; Brown, Janice M Y; Felsher, Dean W; Fan, Alice C

    2012-01-01

    The authors present the first case report of a patient with lymphoma who developed disseminated cryptococcal osteomyelitis and meningitis while being treated with the PEP-C (prednisone, etoposide, procarbazine and cyclophosphamide) chemotherapy regimen. During investigation of fever and new bony lesions, fungal culture from a rib biopsy revealed that the patient had cryptococcal osteomyelitis. Further evaluation demonstrated concurrent cryptococcal meningitis. The patient’s disseminated cryptococcal infections completely resolved after a full course of antifungal treatment. Cryptococcal osteomyelitis is itself an extremely rare diagnosis, and the unique presentation with concurrent cryptococcal meningitis in our patient with lymphoma was likely due to his PEP-C treatment. It is well recognised that prolonged intensive chemotherapeutic regimens place patients at risk for atypical infections; yet physicians should recognise that even chronic low-dose therapies can put patients at risk for fungal infections. Physicians should consider fungal infections as part of the infectious investigation of a lymphopaenic patient on PEP-C. PMID:22962380

  8. Damage and Shaking Intensity in the M5.7 Canyondam Earthquake

    Science.gov (United States)

    Boatwright, J.; Chapman, K.; Gold, M. B.; Hardebeck, J. L.

    2013-12-01

    An M5.7 earthquake occurred southeast of Lake Almanor, CA, at 8:47 PM on May 23, 2013. Double-difference relocations of the main shock and aftershocks indicate that the earthquake nucleated at 11 km depth and ruptured up dip on a fault striking 292° and dipping 70° to the northeast. The earthquake cracked foundations, broke chimneys, and ruptured plumbing around Lake Almanor. We canvassed communities around the lake and to the south and east for earthquake damage, adding reports from our interviews to the geocoded 'Did You Feel It?' reports and to a set of damage reports collected by the Plumas County Office of Emergency Services. Three communities suffered significant damage. In Lake Almanor West, 14 km and 290° from the hypocenter, one wood-frame house was shifted on its foundation, the cripple wall of another house was racked, and water and gas pipes in five houses were ruptured. This damage indicates the shaking approached MMI 8. In Lake Almanor Country Club, 10 km and 310° from the hypocenter, more than 40 chimneys were cracked, broken, or collapsed, a coupling for the municipal water tank was ruptured, and a 200-foot long fissure opened on a slope facing the lake. This damage indicates shaking between MMI 7 and MMI 8, consistent with the accelerograph recording of PGA = 38% g and PGV = 30 cm/s at the Fire Station in Lake Almanor Country Club. This CSMIP station and a PG&E station on the crest of the Butt Valley Dam obtained the only recordings within 50 km of the epicenter. In Hamilton Branch, 10 km and 345° from the hypocenter, a foundation of a wood-frame house was damaged, and 14 chimneys and a water pipe were broken, indicative of MMI 7 shaking. All three communities are underlain by Tertiary and Quaternary basalts. The communities of Chester, Westwood, and Greenville were less damaged, suffering cracked drywall, broken windows, and objects thrown from shelves. The intensities in the three most strongly damaged communities increase as the azimuth

  9. Solar wind triggering of geomagnetic disturbances and strong (M>6.8) earthquakes during the November - December 2004 period

    CERN Document Server

    Anagnostopoulos, G; Antoniou, P

    2010-01-01

    This paper brings space weather prediction close to earthquake (EQ) prediction research. The results of this paper support conclusions of previously presented statistical studies that solar activity influences the seismic activity, this influence is mediated through rapid geomagnetic disturbances and the geomagnetic disturbances are related with increases of solar wind speed. Our study concern an example of 40 days with direct response of a series of 7 strong-to-giant (M=6.8-9.3) EQs (including the Andaman-Sumatra EQ) to solar wind speed increases and subsequent geomagnetic fast disturbances. Our analysis for 10 M>6 EQs from November 23 to December 28, 2004 suggests a mean time response delay of EQs to fast geomagnetic disturbances of ~1.5 days. The two giant EQs during this period occurred after the two fastest geomagnetic variations, as revealed by the ratio of the daily Kp index variation over a day {\\Delta}Kp/{\\Delta}t (12 and 15, respectively). It suggests that the fast disturbance of the magnetosphere, ...

  10. PEP: first Herschel probe of dusty galaxy evolution up to z~3

    CERN Document Server

    Gruppioni, C; Andreani, P; Rodighiero, G; Cimatti, A; Altieri, B; Aussel, H; Berta, S; Bongiovanni, A; Brisbin, D; Cava, A; Cepa, J; Daddi, E; Dominguez-Sanchez, H; Elbaz, D; Schreiber, N Forster; Genzel, R; Le Floc'h, E; Lutz, D; Magdis, G; Magliocchetti, M; Magnelli, B; Maiolino, R; Nordon, R; Per'ez-García, A M; Poglitsch, A; Popesso, P; Riguccini, L; Saintonge, A; Sanchez-Portal, M; Santini, P; Shao, L; Sturm, E; Tacconi, L; Valtchanov, I

    2010-01-01

    We exploit the deepest existing far-infrared (FIR) data obtained so far by Herschel at 100 and 160 um in the GOODS-N, as part of the PACS Evolutionary Probe (PEP) survey, to derive for the first time the evolution of the rest-frame 60-um, 90-um, and total IR luminosity functions (LFs) of galaxies and AGNs from z=0 to unprecedented high redshifts (z∼2-3). The PEP LFs were computed using the 1/Vmax method. The FIR sources were classified by means of a detailed broad- band SED-fitting analysis and spectral characterisation. Based on the best-fit model results, k-correction and total IR (8-1000 um) luminosity were obtained for each source. LFs (monochromatic and total) were then derived for various IR populations separately in different redshift bins and compared to backward evolution model predictions. We detect strong evolution in the LF to at least z~2. Objects with SEDs similar to local spiral galaxies are the major contributors to the star formation density (SFD) at z1.5 the SFD is dominated by the cont...

  11. In Depth Diagnostics for RF System Operation in the PEP-II B Factory

    CERN Document Server

    Van Winkle, Daniel; Teytelman, Dmitry

    2005-01-01

    The PEP-II RF systems incorporate numerous feedback loops in the low-level processing for impedance control and operating point regulation. The interaction of the multiple loops with the beam is complicated, and the systems incorporate online diagnostic tools to configure the feedback loops as well as to record fault files in the case of an RF abort. Rapid and consistent analysis of the RF-related beam aborts and other failures is critical to the reliable operation of the B-Factory, especially at the recently achieved high beam currents. Procedures and algorithms used to extract diagnostic information from time domain fault files are presented and illustrated via example interpretations of PEP-II fault file data. Example faults presented will highlight the subtle interpretation required to determine to root cause. Some such examples are: abort kicker firing asynchronously, klystron and cavity arcs, beam loss leading to longitudinal instability, tuner read back jumps and poorly configured low-level RF feedback...

  12. Dynamic Aperture and Tolerances for PEP-X Ultimate Storage Ring Design

    Energy Technology Data Exchange (ETDEWEB)

    Borland, M.; /Argonne; Cai, Y.; Nosochkov, Y.; Wang, M.-H.; /SLAC; Hettel, R.O.; /SLAC

    2011-12-13

    A lattice for the PEP-X ultimate storage ring light source, having 11 pm-rad natural emittance at a beam energy of 4.5 GeV at zero current, using 90 m of damping wiggler and fitting into the existing 2.2-km PEP-II tunnel, has been recently designed. Such a low emittance lattice requires very strong sextupoles for chromaticity correction, which in turn introduce strong non-linear field effects that limit the beam dynamic aperture. In order to maximize the dynamic aperture we choose the cell phases to cancel the third and fourth order geometric resonances in each 8-cell arc. Four families of chromatic sextupoles and six families of geometric (or harmonic) sextupoles are added to correct the chromatic and amplitude-dependent tunes. To find the best settings of the ten sextupole families, we use a Multi-Objective Genetic Optimizer employing elegant to optimize the beam lifetime and dynamic aperture simultaneously. Then we evaluate dynamic aperture reduction caused by magnetic field multipole errors, magnet fabrication errors and misalignments. A sufficient dynamic aperture is obtained for injection, as well as workable beam lifetime.

  13. PEP-X: An Ultimate Storage Ring Based on Fourth-Order Geometric Achromats

    Energy Technology Data Exchange (ETDEWEB)

    Cai, Yunhai; Bane, Karl; Hettel, Robert; Nosochkov, Yuri; Wang, Min-Huey; /SLAC

    2012-04-06

    We have designed an 'ultimate' storage ring for the PEP-X light source that achieves the diffraction limited emittances (at 1.5 {angstrom}) of 12 pm-rad in both horizontal and vertical planes with a 4.5-GeV beam. These emittances include the contribution of intrabeam scattering at a nominal current of 200 mA in 3300 bunches. This quality beam in conjunction with a conventional 4-m undulator in a straight section can generate synchrotron radiation having a spectral brightness above 10{sup 22} [photons/s/mm{sup 2}/mrad{sup 2}/0.1% BW] at a 10 keV photon energy. The high coherence at the diffraction limit makes PEP-X competitive with 4th generation light sources based on an energy recovery linac. In addition, the beam lifetime is several hours and the dynamic aperture is large enough to allow off-axis injection. The alignment and stability tolerances, though challenging, are achievable. A ring with all these properties is only possible because of several major advances in mitigating the effects of nonlinear resonances.

  14. In Depth Diagnostics for RF System Operation in the PEP-II B Factory

    Energy Technology Data Exchange (ETDEWEB)

    Van Winkle, Daniel; Fox, John; Teytelman, Dmitry; /SLAC

    2005-05-27

    The PEP-II RF systems incorporate numerous feedback loops in the low-level processing for impedance control and operating point regulation. The interaction of the multiple loops with the beam is complicated, and the systems incorporate online diagnostic tools to configure the feedback loops as well as to record fault files in the case of an RF abort. Rapid and consistent analysis of the RF-related beam aborts and other failures is critical to the reliable operation of the B-Factory, especially at the recently achieved high beam currents. Procedures and algorithms used to extract diagnostic information from time domain fault files are presented and illustrated via example interpretations of PEP-II fault file data. Example faults presented will highlight the subtle interpretation required to determine the root cause. Some such examples are: abort kicker firing asynchronously, klystron and cavity arcs, beam loss leading to longitudinal instability, tuner read back jumps and poorly configured low-level RF feedback loop.

  15. A combined M5P tree and hazard-based duration model for predicting urban freeway traffic accident durations.

    Science.gov (United States)

    Lin, Lei; Wang, Qian; Sadek, Adel W

    2016-06-01

    The duration of freeway traffic accidents duration is an important factor, which affects traffic congestion, environmental pollution, and secondary accidents. Among previous studies, the M5P algorithm has been shown to be an effective tool for predicting incident duration. M5P builds a tree-based model, like the traditional classification and regression tree (CART) method, but with multiple linear regression models as its leaves. The problem with M5P for accident duration prediction, however, is that whereas linear regression assumes that the conditional distribution of accident durations is normally distributed, the distribution for a "time-to-an-event" is almost certainly nonsymmetrical. A hazard-based duration model (HBDM) is a better choice for this kind of a "time-to-event" modeling scenario, and given this, HBDMs have been previously applied to analyze and predict traffic accidents duration. Previous research, however, has not yet applied HBDMs for accident duration prediction, in association with clustering or classification of the dataset to minimize data heterogeneity. The current paper proposes a novel approach for accident duration prediction, which improves on the original M5P tree algorithm through the construction of a M5P-HBDM model, in which the leaves of the M5P tree model are HBDMs instead of linear regression models. Such a model offers the advantage of minimizing data heterogeneity through dataset classification, and avoids the need for the incorrect assumption of normality for traffic accident durations. The proposed model was then tested on two freeway accident datasets. For each dataset, the first 500 records were used to train the following three models: (1) an M5P tree; (2) a HBDM; and (3) the proposed M5P-HBDM, and the remainder of data were used for testing. The results show that the proposed M5P-HBDM managed to identify more significant and meaningful variables than either M5P or HBDMs. Moreover, the M5P-HBDM had the lowest overall mean

  16. YccW is the m5C methyltransferase specific for 23S rRNA nucleotide 1962

    DEFF Research Database (Denmark)

    Purta, Elzbieta; O'Connor, Michelle; Bujnicki, Janusz M

    2008-01-01

    . coli marginally reduces its growth rate. YccW had previously eluded identification because it displays only limited sequence similarity to the m(5)C methyltransferases RsmB and RsmF and is in fact more similar to known m(5)U (5-methyluridine) RNA methyltransferases. In keeping with the previously...... proposed nomenclature system for bacterial rRNA methyltransferases, yccW is now designated as the rRNA large subunit methyltransferase gene rlmI....

  17. Seismicity rate changes along the central California coast due to stress changes from the 2003 M 6.5 San Simeon and 2004 M 6.0 Parkfield earthquakes

    Science.gov (United States)

    Aron, A.; Hardebeck, J.L.

    2009-01-01

    We investigated the relationship between seismicity rate changes and modeled Coulomb static stress changes from the 2003 M 6.5 San Simeon and the 2004 M 6.0 Parkfield earthquakes in central California. Coulomb stress modeling indicates that the San Simeon mainshock loaded parts of the Rinconada, Hosgri, and San Andreas strike-slip faults, along with the reverse faults of the southern Los Osos domain. All of these loaded faults, except for the San Andreas, experienced a seismicity rate increase at the time of the San Simeon mainshock. The Parkfield earthquake occurred 9 months later on the loaded portion of the San Andreas fault. The Parkfield earthquake unloaded the Hosgri fault and the reverse faults of the southern Los Osos domain, which both experienced seismicity rate decreases at the time of the Parkfield event, although the decreases may be related to the decay of San Simeon-triggered seismicity. Coulomb stress unloading from the Parkfield earthquake appears to have altered the aftershock decay rate of the southern cluster of San Simeon after-shocks, which is deficient compared to the expected number of aftershocks from the Omori decay parameters based on the pre-Parkfield aftershocks. Dynamic stress changes cannot explain the deficiency of aftershocks, providing evidence that static stress changes affect earthquake occurrence. However, a burst of seismicity following the Parkfield earthquake at Ragged Point, where the static stress was decreased, provides evidence for dynamic stress triggering. It therefore appears that both Coulomb static stress changes and dynamic stress changes affect the seismicity rate.

  18. Further Empirical Data on the Psychoeducational Profile-Revised (PEP-R): Reliability and Validation with the Vineland Adaptive Behavior Scales

    Science.gov (United States)

    Villa, Susanna; Micheli, Enrico; Villa, Laura; Pastore, Valentina; Crippa, Alessandro; Molteni, Massimo

    2010-01-01

    The PEP-R (psychoeducational profile revised) is an instrument that has been used in many countries to assess abilities and formulate treatment programs for children with autism and related developmental disorders. To the end to provide further information on the PEP-R's psychometric properties, a large sample (N = 137) of children presenting…

  19. Binding of Streptococcus pneumoniae endopeptidase O (PepO) to complement component C1q modulates the complement attack and promotes host cell adherence.

    Science.gov (United States)

    Agarwal, Vaibhav; Sroka, Magdalena; Fulde, Marcus; Bergmann, Simone; Riesbeck, Kristian; Blom, Anna M

    2014-05-30

    The Gram-positive species Streptococcus pneumoniae is a human pathogen causing severe local and life-threatening invasive diseases associated with high mortality rates and death. We demonstrated recently that pneumococcal endopeptidase O (PepO) is a ubiquitously expressed, multifunctional plasminogen and fibronectin-binding protein facilitating host cell invasion and evasion of innate immunity. In this study, we found that PepO interacts directly with the complement C1q protein, thereby attenuating the classical complement pathway and facilitating pneumococcal complement escape. PepO binds both free C1q and C1 complex in a dose-dependent manner based on ionic interactions. Our results indicate that recombinant PepO specifically inhibits the classical pathway of complement activation in both hemolytic and complement deposition assays. This inhibition is due to direct interaction of PepO with C1q, leading to a strong activation of the classical complement pathway, and results in consumption of complement components. In addition, PepO binds the classical complement pathway inhibitor C4BP, thereby regulating downstream complement activation. Importantly, pneumococcal surface-exposed PepO-C1q interaction mediates bacterial adherence to host epithelial cells. Taken together, PepO facilitates C1q-mediated bacterial adherence, whereas its localized release consumes complement as a result of its activation following binding of C1q, thus representing an additional mechanism of human complement escape by this versatile pathogen.

  20. SELF and VLF electromagnetic emissions that preceded the M6.2 Central Italy earthquake occurred on August 24, 2016

    Science.gov (United States)

    Cataldi, Daniele; Cataldi, Gabriele; Straser, Valentino

    2017-04-01

    On August 24, 2016 at 01:36:32 UTC a destructive earthquake hit Central Italy with a magnitude of M6.2. The authors of this study have recorded some electromagnetic signals that have preceded this strong earthquake. These signals were recorded through two electromagnetic monitoring stations realized by Gabriele Cataldi and Daniele Cataldi, located near the town of Albano Laziale (Rome, Italy) and near the city of Lariano (Rome, Italy) and can monitor the radio spectrum 24h7 between 0.001 Hz and 96 kHz (SELF-LF band). The electromagnetic monitoring allowed to identify two interesting types of electromagnetic anomalies: the first electromagnetic anomaly was recorded on August 18, 2016 between 02:47 UTC and 06:21 UTC, in the VLF band prevalently between 18kHz and 26kHz; the second electromagnetic anomaly was registered between 08:00 UTC on August 23, 2016 and 05:00 UTC on August 24, 2016, prevalently between 0.01 and 0.7Hz: the most intense signals were recorded at 08:50 UTC on August 23, 2016 and approximately 1 hour before the strong earthquake. The Earth's electromagnetic background monitoring in the SELF-VLF band (0Hztechnological) have allowed us to understand that there are actually two families of pre-seismic radio emissions: 1) radio emissions identified as Earth's geomagnetic field disturbances related to "near Earth" solar wind proton density increase variations, and for this reason it can be seen from any point on the Earth (this is "no local" type emissions); 2) radio signals are not connected directly to the solar and geomagnetic activity: these radio signals are probably generated by piezoelectricity phenomena occurring near the focal area of the earthquake and are detectable near earthquake epicenter (this is a "local" type emissions). It is therefore clear that the monitoring of solar activity and Earth's geomagnetic activity is an activity of fundamental importance to be able to have a general understanding of pre-seismic radio signals nature. In fact

  1. Offline Performance of the Filter Bank EEW Algorithm in the 2014 M6.0 South Napa Earthquake

    Science.gov (United States)

    Meier, M. A.; Heaton, T. H.; Clinton, J. F.

    2014-12-01

    Medium size events like the M6.0 South Napa earthquake are very challenging for EEW: the damage such events produce can be severe, but it is generally confined to relatively small zones around the epicenter and the shaking duration is short. This leaves a very short window for timely EEW alerts. Algorithms that wait for several stations to trigger before sending out EEW alerts are typically not fast enough for these kind of events because their blind zone (the zone where strong ground motions start before the warnings arrive) typically covers all or most of the area that experiences strong ground motions. At the same time, single station algorithms are often too unreliable to provide useful alerts. The filter bank EEW algorithm is a new algorithm that is designed to provide maximally accurate and precise earthquake parameter estimates with minimum data input, with the goal of producing reliable EEW alerts when only a very small number of stations have been reached by the p-wave. It combines the strengths of single station and network based algorithms in that it starts parameter estimates as soon as 0.5 seconds of data are available from the first station, but then perpetually incorporates additional data from the same or from any number of other stations. The algorithm analyzes the time dependent frequency content of real time waveforms with a filter bank. It then uses an extensive training data set to find earthquake records from the past that have had similar frequency content at a given time since the p-wave onset. The source parameters of the most similar events are used to parameterize a likelihood function for the source parameters of the ongoing event, which can then be maximized to find the most likely parameter estimates. Our preliminary results show that the filter bank EEW algorithm correctly estimated the magnitude of the South Napa earthquake to be ~M6 with only 1 second worth of data at the nearest station to the epicenter. This estimate is then

  2. Improved awareness and appropriate use of non-occupational post-exposure prophylaxis (nPEP for HIV prevention following a multi-modal communication strategy

    Directory of Open Access Journals (Sweden)

    Minas Byron

    2012-10-01

    Full Text Available Abstract Background In May 2005, the Western Australian Department of Health (WA Health developed a communication strategy to improve the awareness and appropriate use of non-occupational post-exposure prophylaxis (nPEP in WA. The communication strategy included the development of an nPEP information pamphlet, the establishment of a 24 hour nPEP phone line and the distribution of the WA Health nPEP guidelines to health professionals. The communication strategy was aimed at gay men, people in sero-discordant relationships, people living with HIV, injecting drug users and health care providers with patients from these populations. This evaluation aimed to assess the awareness and appropriate use of nPEP in WA before and after the commencement of the nPEP communication strategy. Methods A program logic method was used to identify the immediate (short-term and ultimate (long-term outcomes of the communication strategy. The achievement of these outcomes was evaluated using data from website statistics, a survey of ‘sexuality sensitive’ doctors, statistics published in Perth Gay Community Periodic Surveys (PGCPS and data from the WA nPEP database. A χ2 test for trend was conducted to identify any significant changes in the ultimate outcome indicators pre- and post-strategy. Results nPEP awareness among gay men in the PGCPS initially increased from 17.2% in 2002 to 54.9% in 2008, then decreased to 39.9% in 2010. After the commencement of the communication strategy, the proportion of nPEP prescriptions meeting the eligibility criteria for nPEP significantly increased (61.2% in 2002-2005 to 90.0% in 2008-2010 (p  Conclusions Since the introduction of the nPEP communication strategy, the delivery and appropriate use of nPEP have significantly improved in WA. In the 2008-2010 period, an improvement in HIV testing of nPEP recipients at three month follow-up was reported for the first time in WA. However, there is a need for ongoing activities to

  3. The combined transduction of copper, zinc-superoxide dismutase and catalase mediated by cell-penetrating peptide, PEP-1, to protect myocardium from ischemia-reperfusion injury

    Directory of Open Access Journals (Sweden)

    Guo Ling-Yun

    2011-05-01

    Full Text Available Abstract Background Our previous studies indicate that either PEP-1-superoxide dismutase 1 (SOD1 or PEP-1-catalase (CAT fusion proteins protects myocardium from ischemia-reperfusion-induced injury in rats. The aim of this study is to explore whether combined use of PEP-1-SOD1 and PEP-1-CAT enhances their protective effects. Methods SOD1, PEP-1-SOD1, CAT or PEP-1-CAT fusion proteins were prepared and purified by genetic engineering. In vitro and in vivo effects of these proteins on cell apoptosis and the protection of myocardium after ischemia-reperfusion injury were measured. Embryo cardiac myocyte H9c2 cells were used for the in vitro studies. In vitro cellular injury was determined by the expression of lactate dehydrogenase (LDH. Cell apoptosis was quantitatively assessed with Annexin V and PI double staining by Flow cytometry. In vivo, rat left anterior descending coronary artery (LAD was ligated for one hour followed by two hours of reperfusion. Hemodynamics was then measured. Myocardial infarct size was evaluated by TTC staining. Serum levels of myocardial markers, creatine kinase-MB (CK-MB and cTnT were quantified by ELISA. Bcl-2 and Bax expression in left ventricle myocardium were analyzed by western blot. Results In vitro, PEP-1-SOD1 or PEP-1-CAT inhibited LDH release and apoptosis rate of H9c2 cells. Combined transduction of PEP-1-SOD1 and PEP-1-CAT, however, further reduced the LDH level and apoptosis rate. In vivo, combined usage of PEP-1-SOD1 and PEP-1-CAT produced a greater effect than individual proteins on the reduction of CK-MB, cTnT, apoptosis rate, lipoxidation end product malondialdehyde, and the infarct size of myocardium. Functionally, the combination of these two proteins further increased left ventricle systolic pressure, but decreased left ventricle end-diastolic pressure. Conclusion This study provided a basis for the treatment or prevention of myocardial ischemia-reperfusion injury with the combined usage of PEP-1-SOD1

  4. Transduction of PEP-1-heme oxygenase-1 into insulin-producing INS-1 cells protects them against cytokine-induced cell death

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Su Jin; Kang, Hyung Kyung [Department of Physiology, College of Medicine, Hallym University, Chunchon 200-702 (Korea, Republic of); Song, Dong Keun [Department of Pharmacology, College of Medicine, Hallym University, Chunchon 200-702 (Korea, Republic of); Eum, Won Sik; Park, Jinseu [Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702 (Korea, Republic of); Choi, Soo Young, E-mail: sychoi@hallym.ac.kr [Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702 (Korea, Republic of); Kwon, Hyeok Yil, E-mail: hykwon@hallym.ac.kr [Department of Physiology, College of Medicine, Hallym University, Chunchon 200-702 (Korea, Republic of)

    2015-06-05

    Pro-inflammatory cytokines play a crucial role in the destruction of pancreatic β-cells, thereby triggering the development of autoimmune diabetes mellitus. We recently developed a cell-permeable fusion protein, PEP-1-heme oxygenase-1 (PEP-1-HO-1) and investigated the anti-inflammatory effects in macrophage cells. In this study, we transduced PEP-1-HO-1 into INS-1 insulinoma cells and examined its protective effect against cytokine-induced cell death. PEP-1-HO-1 was successfully delivered into INS-1 cells in time- and dose-dependent manner and was maintained within the cells for at least 48 h. Pre-treatment with PEP-1-HO-1 increased the survival of INS-1 cells exposed to cytokine mixture (IL-1β, IFN-γ, and TNF-α) in a dose-dependent manner. PEP-1-HO-1 markedly decreased cytokine-induced production of reactive oxygen species (ROS), nitric oxide (NO), and malondialdehyde (MDA). These protective effects of PEP-1-HO-1 against cytokines were correlated with the changes in the levels of signaling mediators of inflammation (iNOS and COX-2) and cell apoptosis/survival (Bcl-2, Bax, caspase-3, PARP, JNK, and Akt). These results showed that the transduced PEP-1-HO-1 efficiently prevented cytokine-induced cell death of INS-1 cells by alleviating oxidative/nitrosative stresses and inflammation. Further, these results suggested that PEP-1-mediated HO-1 transduction may be a potential therapeutic strategy to prevent β-cell destruction in patients with autoimmune diabetes mellitus. - Highlights: • We showed that PEP-1-HO-1 was efficiently delivered into INS-1 cells. • Transduced PEP-1-HO-1 exerted a protective effect against cytokine-induced cell death. • Transduced PEP-1-HO-1 inhibited cytokine-induced ROS and NO accumulation. • PEP-1-HO-1 suppressed cytokine-induced expression of iNOS, COX-2, and Bax. • PEP-1-HO-1 transduction may be an efficient tool to prevent β-cell destruction.

  5. Seismo-Ionospheric Precursor in the GIM TEC of the 24 August 2014 M6 Napa Earthquake

    Science.gov (United States)

    Wu, T. Y.; Liu, T. J. Y.; Liu, J. Y.

    2015-12-01

    This study examines seismo-ionospheric precursors (SIPs) in the global ionosphere map (GIM) of the total electron content (TEC) associated with the 24 August 2014 M6 South Napa earthquake and statistical evidence of SIPs of the GPS TEC in western USA during 2000-2014. The temporal SIP in the GIM TEC around the epicenter significantly decreasing (negative anomaly) on 22 August. To discriminate the global effect, such as solar flares, magnetic storms, etc., and the local effect, such as earthquakes, 5183 lattices on the GIM are employed to conduct a global search of the SIP distribution. Anomalies of both GIM TEC and associated gradients specifically and continuously appearing over the epicenter suggest that the SIP relate to the 2014 South Napa earthquake. A simulation is further carried out to produce the SIP in GIM TEC before the earthquake. Results indicate that the eastward electric field generated over the epicenter area during the earthquake preparation period to be essential.

  6. Seismic Documentation for Rock Damage and Heal on the San Andreas Fault Involved in the 2004 M6 Parkfield Earthquake

    Science.gov (United States)

    Malin, P. M.; Li, Y.; Chen, P.; Cochran, E. M.; Vidale, J. E.

    2007-12-01

    After the M6 Parkfield earthquake that occurred on 28 September 2004, we deployed a dense seismic array at the same sites as used in our experiment in the fall of 2002. The measurements using moving-window cross- correlation of waveforms for the repeated explosions and microearthquakes recorded in 2002 and 2004 show a decrease in shear velocity of at least ~2.5% within a ~200-m-wide zone across the San Andreas main fault trace most likely owing to co-seismic damage of fault rocks caused by dynamic rupture in this M6 earthquake. The width of the damage zone characterized by larger velocity changes is consistent with the low-velocity waveguide model on the SAF near Parkfield derived from fault-zone trapped waves [Li et al., 2004]. The estimated ratio between the P and S wave traveltime changes is 0.57 within the rupture zone and ~0.65 in the surrounding rocks, indicating wetter cracks within the damaged fault zone, probably due to the ground water percolating into the cracks opened in the mainshock. The measurements of traveltime changes for repeated aftershocks in 21 clusters, with a total of ~130 events, located at different depths along the rupture in 2004 show that the maximum shear velocity increased by ~1.2% within the damage zone in 3.5 months starting a week after the mainshock, indicating that the fault heals in the post-seismic stage due to the closure of cracks in the damaged rock. The data recorded at a seismograph installed in the SAFOD mainhole passing the San Andreas fault zone at ~3-km depths for repeated aftershocks in December of 2004 and later show that seismic velocities within the damage zone were changed by ~0.3% in a month, but no changes were registered at seismographs installed in the vertical pilot borehole drilled ~1.8 km away from the main fault trace for the same repeated events. We find that the healing rate is logarithmically decreasing through time with greater healing rate in the earlier stage after the mainshock. The magnitude of

  7. Photodynamic activities of silicon phthalocyanines against achromic M6 melanoma cells and healthy human melanocytes and keratinocytes.

    Science.gov (United States)

    Decreau, R; Richard, M J; Verrando, P; Chanon, M; Julliard, M

    1999-01-01

    Dichlorosilicon phthalocyanine (Cl2SiPc) and bis(tri-n-hexylsiloxy) silicon phthalocyanine (HexSiPc) have been evaluated in vitro as potential photosensitizers for photodynamic therapy (PDT) against the human amelanotic melanoma cell line M6. Each photosensitizer is dissolved in a solvent-PBS mixture, or entrapped in egg-yolk lecithin liposomes or in Cremophor EL micelles. The cells are incubated for 1 h with the sensitizer and then irradiated for 20 min, 1 h or 2 h (lambda > 480 nm, 10 mW cm-2). The photocytotoxic effect is dependent on the photosensitizer concentration and the light dose. Higher phototoxicity is observed after an irradiation of 2 h: treatment with a solution of photosensitizer (2 x 10(-9) M) leads to 10% (HexSiPc in egg-yolk lecithin liposomes) or 20% (Cl2SiPc in DMF-PBS solution) cell viability. After 1 h incubation and 20 min of light exposure, the photodynamic effect is connected with the type of delivery system used. For HexSiPc, lower cell viability is found when this photosensitizer is entrapped in egg-yolk lecithin instead of solvent-PBS or for Cremophor EL micelles with Cl2SiPc. Liposome-delivered HexSiPc leads to lipid damage in M6 cells, illustrated by an increase of thiobarbituric acid-reacting substances (TBARs), but the change is not significant with Cremophor EL. The same is observed for the antioxidative defences after photodynamic stress. The cells irradiated with HexSiPc entrapped in liposomes display an increase of superoxide dismutase (SOD) activity and a decrease of glutathione (GSH) level, glutathione peroxidase (GSHPx) and catalase (Cat) activities.

  8. Comparison of Artificial Neural Network And M5 Model Tree Technique In Water Level Forecasting of Solo River

    Science.gov (United States)

    Lasminto, Umboro; Hery Mularta, Listya

    2010-05-01

    Flood events along the Solo River flow at the end of December 2007 has caused lose of properties and lives. Floods occurred in the city of Ngawi, Madiun, Bojonegoro, Babat and surrounding areas. To reduce future losses, one of the important efforts that will occur during a flood is to get information about the magnitude and time will be floods, so that people can make an effort to reduce its impact. Flood forecasting model can provide information of water level in the river some time before the incident. This paper will compare the flood forecasting model at Bojonegoro City was built using the technique of Artificial Neural Network (ANN) and M5 Model Tree (M5MT). The model will forecast the water level of 1, 3 and 6 hours ahead at the point of water level recorders in the City of Bojonegoro using input from the water level at some point water level recorders in the upstream such as Karangnongko, Sekayu, Jurug and Wonogiri. The same data set of hourly water level records are used to build the model of ANN and M5MT technique. The selection of parameters and setup of ANN and M5MT technique is done to obtain the best result. The results of the model are evaluated by calculating the Root Mean Square Error (RMSE) between the predictions and observations. RMSE produced by the water level forecasting model 1, 3 and 6 hours ahead with M5MT technique are 0.2723, 0.6279 and 0.7176 meters. While the ANN technique are 0.1829, 0.3192 and 0517 meters. ANN technique has a better ability in predicting low flow, whereas M5 Model Tree technique has a better ability in predicting high flow. Keywords : Water level forecasting, Solo River, M5 Model Tree, Artificial Neural Network

  9. A Case Report:Acute Monocytic Leukemia Switching to Acute Erythroid Leukemia and Review of the Literature%急性单核细胞白血病M5转为急性红白血病M6一例病例分析及文献复习

    Institute of Scientific and Technical Information of China (English)

    汤静; 孟力; 汤屹; 何丽; 卜亚静

    2012-01-01

    Objective: Acute erythroid leukemia is rare.Clone switch in acute leukemia at relapse is an uncommom event, and therefore rarely reported in the literature. To improve the recognition of acute erythroid leukemia and mechanism of clone switch, here we report a case of acute monocytic leukemia switching to acute erythroid leukemia at relapse. Methods: To analyse a case of clone switch from acute monocytic leukemia to acute erythroid leukemia and get information at morphologic, cytogenetic and molecular levels during the treatment by some tests. Results: At initial diagnosis, the patient was acute monocytic leukemia. And switched to acute erythroid leukemia by analysis of results at morphologic, cytogenetic and molecular level after a cycle of chemotherapy. After another cycle of chemotherapy, the patient got a remission at morphologic level, and discharged. Afterwards.the patient gave up the treatment and died after 2 months. Conclusions: There would be two reasons to explain the clone switch: Firstly, the disorders come from the progenitor of red cells and monocytes, then cause the disease. As well, the disorders may come from impaired early hemapoietic stem cell(hsc), leading to the monocytic and erythropoietic abnormalities. Secondly, the changes of bone marrow microenvironment induced erythroid abnormalities which lead to acute erythroid leukemia. In this case, the disease may have abnormalities in early hematopoietic stem cells, and the bone marrow microenvironment played an important role in the process of the disease. The results need to affirmed by further clinical observation and further researches. It remind us that dynamic diagnosis and consciousness of treatment need to improved, Which will contribute to the prevention, diagnosis and treatment of acute leukemia.%目的:红白血病为临床少见的急性髓系白血病亚型,白血病克隆转换不常见,在国内外文献中有关报道少见.通过对一例由急性单核细胞白血病转化的急性红白血病(acute erythroid leukemias,AEL)的病例分析,学习并探讨急性红白血病的临床特点及实验室检查特征,提高对急性红白血病疾病特点及白血病克隆转化的认识.方法:报道一例初诊为急性单核细胞白血病,后转为急性红白血病的患者.期间对其进行持续的细胞形态学,遗传学及分子生物学监测.结果:患者首次入院诊断为急性单核细胞白血病,经过一个疗程化疗后,骨穿显示从急性单核细胞白血病转为急性红白血病.随后再进行了一个疗程化疗,化疗结束后患者好转出院.后因经济原因,患者未继续治疗,2月后随访,患者死亡.结论:本例急性单核细胞性白血病化疗后转为红白血病.究其机制,可能有:一.发病是粒-单定向祖细胞和红系定向祖细胞同时受损,只是早期单核细胞系异常表现明显,红系异常早期表现不明显.或疾病起源于更早期造血干细胞,导致单核系和红系均有异常.二.在疾病过程中,骨髓微环境的变化,诱导红系异常而导致红白血病的发生.经过分析,本病例中,疾病可能起源于更早期造血干细胞的可能性较大,而骨髓微环境在疾病变化过程中则起到了重要的作用.这一结果有待进一步临床观察研究和肯定.提醒临床医生,提高动态的诊断和治疗意识,将有助于该疾病的预防、诊断和治疗.

  10. Stress transfer by the 1988-1989 M = 5.3 and 5.4 Lake Elsman foreshocks to the Loma Prieta fault: Unclamping at the site of peak mainshock slip

    Science.gov (United States)

    Perfettini, Hugo; Stein, Ross S.; Simpson, Robert; Cocco, Massimo

    1999-09-01

    We study the stress transferred by the June 27, 1988, M = 5.3 and August 8, 1989, M = 5.4 Lake Elsman earthquakes, the largest events to strike within 15 km of the future Loma Prieta rupture zone during 74 years before the 1989 M = 6.9 Loma Prieta earthquake. We find that the first Lake Elsman event brought the rupture plane of the second event 0.3-1.6 bars (0.03-0.16 MPa) closer to Coulomb failure but that the Lake Elsman events did not bring the future Loma Prieta hypocentral zone closer to failure. Instead, the Lake Elsman earthquakes are calculated to have reduced the normal stress on (or "undamped") the Loma Prieta rupture surface by 0.5-1.0 bar (0.05-0.10 MPa) at the site where the greatest slip subsequently occurred in the Loma Prieta earthquake. This association between the sites of peak unclamping and slip suggests that the Lake Elsman events did indeed influence the Loma Prieta rupture process. Unclamping the fault would have locally lowered the resistance to sliding. Such an effect could have been enhanced if the lowered normal stress permitted fluid infusion into the undamped part of the fault. Although less well recorded, the ML = 5.0 1964 and ML = 5.3 1967 Corralitos events struck within 10 km of the southwest end of the future Loma Prieta rupture. No similar relationship between the normal stress change and subsequent Loma Prieta slip is observed, although the high-slip patch southwest of the Loma Prieta epicenter corresponds roughly to the site of calculated Coulomb stress increase for a low coefficient of friction. The Lake Elsman-Loma Prieta result is similar to that for the 1987 M = 6.2 Elmore Ranch and M = 6.7 Superstition Hills earthquakes, suggesting that foreshocks might influence the distribution of mainshock slip rather than the site of mainshock nucleation.

  11. The HtrA-like serine protease PepD interacts with and modulates the Mycobacterium tuberculosis 35-kDa antigen outer envelope protein.

    Directory of Open Access Journals (Sweden)

    Mark J White

    Full Text Available Mycobacterium tuberculosis remains a significant global health concern largely due to its ability to persist for extended periods within the granuloma of the host. While residing within the granuloma, the tubercle bacilli are likely to be exposed to stress that can result in formation of aberrant proteins with altered structures. Bacteria encode stress responsive determinants such as proteases and chaperones to deal with misfolded or unfolded proteins. pepD encodes an HtrA-like serine protease and is thought to process proteins altered following exposure of M. tuberculosis to extra-cytoplasmic stress. PepD functions both as a protease and chaperone in vitro, and is required for aspects of M. tuberculosis virulence in vivo. pepD is directly regulated by the stress-responsive two-component signal transduction system MprAB and indirectly by extracytoplasmic function (ECF sigma factor SigE. Loss of PepD also impacts expression of other stress-responsive determinants in M. tuberculosis. To further understand the role of PepD in stress adaptation by M. tuberculosis, a proteomics approach was taken to identify binding proteins and possible substrates of this protein. Using subcellular fractionation, the cellular localization of wild-type and PepD variants was determined. Purified fractions as well as whole cell lysates from Mycobacterium smegmatis or M. tuberculosis strains expressing a catalytically compromised PepD variant were immunoprecipitated for PepD and subjected to LC-MS/MS analyses. Using this strategy, the 35-kDa antigen encoding a homolog of the PspA phage shock protein was identified as a predominant binding partner and substrate of PepD. We postulate that proteolytic cleavage of the 35-kDa antigen by PepD helps maintain cell wall homeostasis in Mycobacterium and regulates specific stress response pathways during periods of extracytoplasmic stress.

  12. Pharmacological in-vitro investigation for digestive property and in-vivo anti-ulcer activity of Pep-Up Syrup

    Directory of Open Access Journals (Sweden)

    Hardik Soni

    2014-01-01

    Full Text Available Objective: To investigate in-vitro digestive property and in-vivo anti-ulcer activity of Pep-Up Syrup in aspirin-induced acute gastric ulcer. Materials and Methods: The in-vitro investigation for digestive property was performed by means of evaluating amylolytic, lipolytic and proteolytic activity in comparison with blank. For in-vivo evaluation of Pep-Up Syrup, aspirin-induced acute gastric ulcer model in rats was used. Selected animals were divided in to three groups where each group was consisting of six animals. Group-I, II and III was considered as normal control, disease control and Pep-Up Syrup treated, respectively. Pep-Up Syrup (3 mL/kg/day treatment was provided for 7 days orally. Ulcer index, gastric wall mucus content, lipid peroxidation level in stomach tissue and tissue antioxidant parameters like superoxide dismutase (SOD, reduced glutathione and catalase enzyme activity were carried out. Histopathology of stomach tissue was also performed. Statistical Analysis: Statistical calculations were done by analysis of variance (ANOVA followed by post-hoc Bonferroni′s test and results were expressed as Mean ± SEM. Results and Discussion: Pep-Up Syrup showed noticeable amylolytic, lipolytic and proteolytic activity. Pre-treatment of Pep-Up Syrup showed significant protection against ulceration and aspirin-induced loss of gastric wall mucus content. Pre-treatment of Pep-Up Syrup also showed significant increase in tissue antioxidant parameters. Histopathology study revealed that Pep-Up Syrup provides significant cyto-protection against aspirin-induced mucosal damage. Conclusions: On the basis of study data it can be concluded that Pep-Up Syrup possesses property of digesting starch, lipids and proteins. Data also revealed that Pep-Up Syrup has antiulcer activity against aspirin-induced acute gastric ulcer.

  13. HyPEP-FY 07 Annual Report: A Hydrogen Production Plant Efficiency Calculation Program

    Energy Technology Data Exchange (ETDEWEB)

    Chang Oh

    2007-09-01

    The Very High Temperature Gas-Cooled Reactor (VHTR) coupled to the High Temperature Steam Electrolysis (HTSE) process is one of two reference integrated systems being investigated by the U.S. Department of Energy and Idaho National Laboratory for the production of hydrogen. In this concept the VHTR outlet temperature of 900 °C provides thermal energy and high efficiency electricity for the electrolysis of steam in the HTSE process. In the second reference system the Sulfur Iodine (SI) process is coupled to the VHTR to produce hydrogen thermochemically. In the HyPEP project we are investigating and characterizing these two reference systems with respect to production, operability, and safety performance criteria. Under production, plant configuration and working fluids are being studied for their effect on efficiency. Under operability, control strategies are being developed with the goal of maintaining equipment within operating limits while meeting changes in demand. Safety studies are to investigate plant response for equipment failures. Specific objectives in FY07 were (1) to develop HyPEP Beta and verification and validation (V&V) plan, (2) to perform steady state system integration, (3) to perform parametric studies with various working fluids and power conversion unit (PCU) configurations, (4) the study of design options such as pressure, temperature, etc. (5) to develop a control strategy and (6) to perform transient analyses for plant upsets, control strategy, etc for hydrogen plant with PCU. This report describes the progress made in FY07 in each of the above areas. (1) The HyPEP code numeric scheme and Graphic User Interface have been tested and refined since the release of the alpha version a year ago. (2) The optimal size and design condition for the intermediate heat exchanger, one of the most important components for integration of the VHTR and HTSE plants, was estimated. (3) Efficiency calculations were performed for a variety of working fluids for

  14. Alanylglutamine dipeptide and growth hormone maintain PepT1-mediated transport in oxidatively stressed Caco-2 cells.

    Science.gov (United States)

    Alteheld, B; Evans, M E; Gu, L H; Ganapathy, V; Leibach, F H; Jones, D P; Ziegler, T R

    2005-01-01

    Reactive oxygen species (ROS) produced by gut mucosal cells during conditions such as inflammatory bowel disease (IBD) may impair mucosal repair and nutrient transport/absorptive function. Absorption of di- and tripeptides in the small intestine and colon is mediated by the H(+)-dependent transporter PepT1, but effects of oxidative stress on di- and tripeptide transport are unknown. We assessed whether exposure to hydrogen peroxide (H(2)O(2)) influences dipeptide transport in human colonic epithelial (Caco-2) cells. Uptake of [(14)C]glycylsarcosine (Gly-Sar) was used to evaluate PepT1-mediated dipeptide transport. Exposure to 1-5 mmol/L H(2)O(2) for 24 h caused a dose-dependent decrease in Gly-Sar transport, which was associated with decreased PepT1 transport velocity (V(max)). Treatment with alanylglutamine (Ala-Gln) or growth hormone (GH) did not alter Caco-2 Gly-Sar transport in the absence of H(2)O(2). However, both Ala-Gln and GH prevented the decrease in dipeptide transport observed with 1 mmol/L H(2)O(2) treatment. Ala-Gln, but not GH, maintained cellular glutathione and prevented the decrease in PepT1 protein expression. Thus, these agents should be further investigated as potential therapies to improve absorption of small peptides in disorders associated with oxidative injury to the gut mucosa.

  15. PEP3 overexpression shortens lag phase but does not alter growth rate in Saccharomyces cerevisiae exposed to acetic acid stress.

    Science.gov (United States)

    Ding, Jun; Holzwarth, Garrett; Bradford, C Samuel; Cooley, Ben; Yoshinaga, Allen S; Patton-Vogt, Jana; Abeliovich, Hagai; Penner, Michael H; Bakalinsky, Alan T

    2015-10-01

    In fungi, two recognized mechanisms contribute to pH homeostasis: the plasma membrane proton-pumping ATPase that exports excess protons and the vacuolar proton-pumping ATPase (V-ATPase) that mediates vacuolar proton uptake. Here, we report that overexpression of PEP3 which encodes a component of the HOPS and CORVET complexes involved in vacuolar biogenesis, shortened lag phase in Saccharomyces cerevisiae exposed to acetic acid stress. By confocal microscopy, PEP3-overexpressing cells stained with the vacuolar membrane-specific dye, FM4-64 had more fragmented vacuoles than the wild-type control. The stained overexpression mutant was also found to exhibit about 3.6-fold more FM4-64 fluorescence than the wild-type control as determined by flow cytometry. While the vacuolar pH of the wild-type strain grown in the presence of 80 mM acetic acid was significantly higher than in the absence of added acid, no significant difference was observed in vacuolar pH of the overexpression strain grown either in the presence or absence of 80 mM acetic acid. Based on an indirect growth assay, the PEP3-overexpression strain exhibited higher V-ATPase activity. We hypothesize that PEP3 overexpression provides protection from acid stress by increasing vacuolar surface area and V-ATPase activity and, hence, proton-sequestering capacity.

  16. PEP3 overexpression shortens lag phase but does not alter growth rate in Saccharomyces cerevisiae exposed to acetic acid stress

    Science.gov (United States)

    Ding, Jun; Holzwarth, Garrett; Bradford, C. Samuel; Cooley, Ben; Yoshinaga, Allen S.; Patton-Vogt, Jana; Abeliovich, Hagai; Penner, Michael H.; Bakalinsky, Alan T.

    2017-01-01

    In fungi, two recognized mechanisms contribute to pH homeostasis: the plasma membrane proton-pumping ATPase that exports excess protons and the vacuolar proton-pumping ATPase (V-ATPase) that mediates vacuolar proton uptake. Here, we report that overexpression of PEP3 which encodes a component of the HOPS and CORVET complexes involved in vacuolar biogenesis, shortened lag phase in Saccharomyces cerevisiae exposed to acetic acid stress. By confocal microscopy, PEP3-overexpressing cells stained with the vacuolar membrane-specific dye, FM4-64 had more fragmented vacuoles than the wild-type control. The stained overexpression mutant was also found to exhibit about 3.6-fold more FM4-64 fluorescence than the wild-type control as determined by flow cytometry. While the vacuolar pH of the wild-type strain grown in the presence of 80 mM acetic acid was significantly higher than in the absence of added acid, no significant difference was observed in vacuolar pH of the overexpression strain grown either in the presence or absence of 80 mM acetic acid. Based on an indirect growth assay, the PEP3-overexpression strain exhibited higher V-ATPase activity. We hypothesize that PEP3 overexpression provides protection from acid stress by increasing vacuolar surface area and V-ATPase activity and, hence, proton-sequestering capacity. PMID:26051671

  17. Prodrugs of purine and pyrimidine analogues for the intestinal di/tri-peptide transporter PepT1

    DEFF Research Database (Denmark)

    Thomsen, Anne Engelbrecht; Friedrichsen, Gerda Marie; Sørensen, Arne Hagsten

    2003-01-01

    A general drug delivery approach for increasing oral bioavailability of purine and pyrimidine analogues such as acyclovir may be to link these compounds reversibly to stabilized dipeptide pro-moieties with affinity for the human intestinal di/tri-peptide transporter, hPepT1. In the present study...

  18. Pizza Parties, Pep Rallies, and Practice Tests: Strategies Used by High School Principals to Raise Percent Proficient

    Science.gov (United States)

    Hollingworth, Liz; Dude, David J.; Shepherd, Julie K.

    2010-01-01

    This study explores ways high school principals are responding to the demands of education reform to raise student test scores on achievement tests used for accountability purposes. Anecdotal evidence suggests administrators have instituted pizza parties and pep rallies to motivate students to do their best and practice tests to prepare students…

  19. Interaction-Point Phase-Space Characterization using Single-Beam and Luminous-Region Measurements at PEP-II

    Energy Technology Data Exchange (ETDEWEB)

    Kozanecki, W; /Saclay; Bevan, A.J.; /Queen Mary, U. of London; Viaud, B.F.; /Montreal U.; Cai, Y.; Fisher, A.S.; O' Grady, C.; Lindquist, B.; Roodman, A.; J.M.Thompson, M.Weaver; /SLAC

    2008-09-09

    We present an extensive experimental characterization of the e{sup {+-}} phase space at the interaction point of the SLAC PEP-II B-Factory, that combines a detailed mapping of luminous-region observables using the BABAR detector, with stored-beam measurements by accelerator techniques.

  20. Filtering images contaminated with pep and salt type noise with pulse-coupled neural networks

    Institute of Scientific and Technical Information of China (English)

    ZHANG Junying; LU Zhijun; SHI Lin; DONG Jiyang; SHI Meihong

    2005-01-01

    Pulse coupled neural network (PCNN) has a specific feature that the fire of one neuron can capture its adjacent neurons to fire due to their spatial proximity and intensity similarity. In this paper, it is indicated that this feature itself is a very good mechanism for image filtering when the image is damaged with pep and salt (PAS) type noise. An adaptive filtering method, in which the noisy pixels are first located and then filtered based on the output of the PCNN, is presented. The threshold function of a neuron in the PCNN is designed when it is used for filtering random PAS and extreme PAS noise contaminated image respectively. The filtered image has no distortion for noisy pixels and only less mistiness for non-noisy pixels, compared with the conventional window-based filtering method. Excellent experimental results show great effectiveness and efficiency of the proposed method, especially for heavy-noise contaminated images.

  1. The "PepSAVI-MS" Pipeline for Natural Product Bioactive Peptide Discovery.

    Science.gov (United States)

    Kirkpatrick, Christine L; Broberg, Christopher A; McCool, Elijah N; Lee, Woo Jean; Chao, Alex; McConnell, Evan W; Pritchard, David A; Hebert, Michael; Fleeman, Renee; Adams, Jessie; Jamil, Amer; Madera, Laurence; Strömstedt, Adam A; Göransson, Ulf; Liu, Yufeng; Hoskin, David W; Shaw, Lindsey N; Hicks, Leslie M

    2017-01-17

    The recent increase in extensively drug-resistant bacterial pathogens and the associated increase of morbidity and mortality demonstrate the immediate need for new antibiotic backbones with novel mechanisms of action. Here, we report the development of the PepSAVI-MS pipeline for bioactive peptide discovery. This highly versatile platform employs mass spectrometry and statistics to identify bioactive peptide targets from complex biological samples. We validate the use of this platform through the successful identification of known bioactive peptides from a botanical species, Viola odorata. Using this pipeline, we have widened the known antimicrobial spectrum for V. odorata cyclotides, including antibacterial activity of cycloviolacin O2 against A. baumannii. We further demonstrate the broad applicability of the platform through the identification of novel anticancer activities for cycloviolacins by their cytotoxicity against ovarian, breast, and prostate cancer cell lines.

  2. Radiological Environmental Protection for PEP-II Ring High Luminosity Operation

    Energy Technology Data Exchange (ETDEWEB)

    Liu, James C.; Nakao, Noriaki; /SLAC

    2006-08-16

    Stanford Linear Accelerator Center (SLAC) is located in northern California, USA. Radiological environmental protection is one of the main elements of the radiation protection program. One of SLAC's accelerator facilities is B-Factory, whose PEP-II accelerator ring has been operating since 1997 and is being upgraded to higher luminosity operation. Four radiological issues associated with high luminosity operation up to CY2008 are re-evaluated: (1) annual doses in IR halls, (2) annual skyshine doses at site boundaries, (3) potential radioactive air releases, and (4) potential groundwater activation. This paper presents the skyshine doses and air emission doses to the Maximally Exposed Individual (MEI) at SLAC site boundaries. The normal beam loss scenarios around PEP-II ring are presented first. In CY2008, the luminosity is 2 x 10{sup 34} cm{sup -2} s{sup -1}, and the stored current is 4.0-A for low-energy ring (LER ) and 2.2-A for high-energy ring (HER). The beam losses around PEP-II ring include those near injection region in IR10 and IR8 and those at collimators (e.g., HER collimators in IR12, LER collimators in IR4 and IR6). The beam losses in IR8 and IR10 (where injection into ring occurs) are further divided into septum, BAD (beam abort dump) and TD (tune-up dump), as well as apertures. The skyshine prompt dose rate distributions as a function of distance from an IR hall at four directions were calculated using the MARS15 Monte Carlo code. For skyshine dose to the MEI, the annual dose (7200 h/y occupancy) is calculated to be 2.9 mrem/y at Sand Hill Road (from e{sup -} losses in IR12 HER collimators) and 1.2 mrem/y at Horse Track Offices near IR6 (from e{sup +} losses in IR8, IR6 and IR4). These are lower than the SLAC skyshine limit of 5 mrem/y for any single facility within SLAC. Radionuclide productions in the air at the PEP-II IR10 were calculated using MARS15. Beam losses of 9-GeV electrons were assumed in three target cases: the copper TD, septum and

  3. PEP NSEFC Module 3 Unit 2 Healthy eating: Reading and Writing

    Institute of Scientific and Technical Information of China (English)

    盛晓

    2011-01-01

    一、教学课型:读写技能整合课英语读写技能整合课是PEP NSEFC Using language部分重要课型之一。该课型基于阅读文本解读,又超越文本信息重构新的文本。教学过程以读、写为主,听、说为辅,从信息输入到信息加工处理,最后到信息的输出,真正着眼于“提高学生用英语获取信息、处理信息、分析问题和解决问题的能力,特别注重提高学生用英语进行思维和表达的能力”。

  4. Amplitude Linearizers for PEP-II 1.2 MW Klystrons and LLRF Systems

    Energy Technology Data Exchange (ETDEWEB)

    Van Winkle, D.; Browne, J.; Fox, J.D.; Mastorides, T.; Rivetta, C.; Teytelman, D.; /SLAC

    2006-07-18

    The PEP-II B-factory has aggressive current increases planned for luminosity through 2008. At 2.2A (HER) on 4A (LER) currents, we estimate that longitudinal growth rates will be comparable to the damping rates currently achieved in the existing low level RF and longitudinal feedback systems. Prior to having a good non-linear time domain model [1] it was postulated that klystron small signal gain non-linearity may be contributing to measured longitudinal growth rates being higher than linearly predicted growth rates. Five prototype klystron amplitude modulation linearizers have been developed to explore improved linearity in the LLRF system. The linearizers operate at 476 MHz with 15 dB dynamic range and 1 MHz linear control bandwidth. Results from lab measurements and high current beam tests are presented. Future development plans, conclusions from beam testing and ideas for future use of this linearization technique are presented.

  5. A search for supersymmetric electrons with the Mark II detector at PEP (Positron Electron Project)

    Energy Technology Data Exchange (ETDEWEB)

    LeClaire, B.W.

    1987-10-01

    An experimental search for selectrons, the supersymmetric partner of the electron, has been performed at the PEP storage ring at SLAC using the Mark II detector. The experimental search done was based upon hypothetical reaction in e/sup +/e/sup -/ interactions at PEP center of mass energies of 29 GeV. In this reaction the selectrons, e-tilde, are assumed produced by the interaction of one of initial state electrons with a photon radiated from the other initial state electron. This latter electron is assumed to continue down the beam pipe undetected. The photon and electron then produce a selectron and a photino, ..gamma..-tilde, in the supersymmetric analog of Compton scattering. The photino is assumed to be the lightest supersymmetric particle, and as such, does not interact in the detector, thereby escaping detection very much like a neutrino. The selectron is assumed to immediately decay into an electron and photino. This electron is produced with large p perpendicular with respect to the beam pipe, since it must balance the transverse momentum carried off by the photinos. Thus, the experimental signature of the process is a single electron in the detector with a large unbalanced tranverse momentum. No events of this type were observed in the original search of 123 pb/sup -1/ of data, resulting in a cross section limit of less than 2.4 x 10/sup -2/ pb (at the 95% CL) within the detector acceptance. This cross section upper limit applies to any process which produces anomalous single electron events with missing transverse momentum. When interpreted as a supersymmetry search it results in a lower selectron mass limit of 22.2 GeV/c/sup 2/ for the case of massless photinos. Limits for non-zero mass photinos have been calculated. 87 refs., 67 figs., 17 tabs.

  6. PEP-on-DEP: A competitive peptide-based disposable electrochemical aptasensor for renin diagnostics.

    Science.gov (United States)

    Biyani, Manish; Kawai, Keiko; Kitamura, Koichiro; Chikae, Miyuki; Biyani, Madhu; Ushijima, Hiromi; Tamiya, Eiichi; Yoneda, Takashi; Takamura, Yuzuru

    2016-10-15

    Antibody-based immunosensors are relatively less accessible to a wide variety of unreachable targets, such as low-molecular-weight biomarkers that represent a rich untapped source of disease-specific diagnostic information. Here, we present a peptide aptamer-based electrochemical sensor technology called 'PEP-on-DEP' to detect less accessible target molecules, such as renin, and to improve the quality of life. Peptide-based aptamers represent a relatively smart class of affinity binders and show great promise in biosensor development. Renin is involved in the regulation of arterial blood pressure and is an emerging biomarker protein for predicting cardiovascular risk and prognosis. To our knowledge, no studies have described aptamer molecules that can be used as new potent probes for renin. Here, we describe a portable electrochemical biosensor platform based on the newly identified peptide aptamer molecules for renin. We constructed a randomized octapeptide library pool with diversified sequences and selected renin specific peptide aptamers using cDNA display technology. We identified a few peptide aptamer sequences with a KD in the µM binding affinity range for renin. Next, we grafted the selected peptide aptamers onto gold nanoparticles and detected renin in a one-step competitive assay using our originally developed DEP (Disposable Electrochemical Printed) chip and a USB powered portable potentiostat system. We successfully detected renin in as little as 300ngmL(-1) using the PEP-on-DEP method. Thus, the generation and characterization of novel probes for unreachable target molecules by merging a newly identified peptide aptamer with electrochemical transduction allowed for the development of a more practical biosensor that, in principle, can be adapted to develop a portable, low-cost and mass-producible biosensor for point-of-care applications.

  7. Improvement of PEP-II Linear Optics with a MIA-Derived Virtual Accelerator

    Energy Technology Data Exchange (ETDEWEB)

    Cerio, B.; /Colgate U.

    2006-08-30

    In several past studies, model independent analysis, in conjunction with a virtual accelerator model, has been successful in improving PEP-II linear geometric optics. In many cases, optics improvement yielded an increase in machine luminosity. In this study, an updated characterization of linear optics is presented. With the PEP-II beam position monitor (BPM) system, four independent beam centroid orbits were extracted and used to determine phase advances and linear Green's functions among BPM locations. A magnetic lattice model was then constructed with a singular value decomposition-enhanced least-square fitting of phase advances and Green's functions, which are functions of quadrupole strengths, sextupole feed-downs, as well as BPM errors, to the corresponding measured quantities. The fitting process yielded a machine model that matched the measured linear optics of the real machine and was therefore deemed the virtual accelerator. High beta beat, as well as linear coupling, was observed in both LER and HER of the virtual accelerator. Since there was higher beta beating in LER, focus was shifted to the improvement of this ring. By adjusting select quadrupoles of the virtual LER and fitting the resulting beta functions and phase advances to those of the desired lattice, the average beta beat of the virtual machine was effectively reduced. The new magnet configuration was dialed into LER on August 10, 2006, and beta beat was reduced by a factor of three. After fine tuning HER to match the improved LER for optimal collision, a record peak luminosity of 12.069 x 10{sup 33} cm{sup -2} s{sup -1} was attained on August 16, 2006.

  8. Adhesions of extracellular surface-layer associated proteins in Lactobacillus M5-L and Q8-L.

    Science.gov (United States)

    Zhang, Yingchun; Xiang, Xinling; Lu, Qianhui; Zhang, Lanwei; Ma, Fang; Wang, Linlin

    2016-02-01

    Surface-layer associated proteins (SLAP) that envelop Lactobacillus paracasei ssp. paracasei M5-L and Lactobacillus casei Q8-L cell surfaces are involved in the adherence of these strain to the human intestinal cell line HT-29. To further elucidate some of the properties of these proteins, we assessed the yields and expressions of SLAP under different incubation conditions. An efficient and selective extraction of SLAP was obtained when cells of Lactobacillus were treated with 5 M LiCl at 37°C in aerobic conditions. The SLAP of Lactobacillus M5-L and Q8-L in cell extracts were visualized by SDS-PAGE and identified by Western blotting with sulfo-N-hydroxysuccinimide-biotin-labeled HT-29 cells as adhesion proteins. Atomic force microscopy contact imaging revealed that Lactobacillus strains M5-L and Q8-L normally display a smooth, homogeneous surface, whereas the surfaces of M5-L and Q8-L treated with 5 M LiCl were rough and more heterogeneous. Analysis of adhesion forces revealed that the initial adhesion forces of 1.41 and 1.28 nN obtained for normal Lactobacillus M5-L and Q8-L strains, respectively, decreased to 0.70 and 0.48 nN, respectively, following 5 M LiCl treatment. Finally, the dominant 45-kDa protein bands of Lactobacillus Q8-L and Lactobacillus M5-L were identified as elongation factor Tu and surface antigen, respectively, by liquid chromatography-tandem mass spectrometry.

  9. The Openness/Intellect Model on the M5-50: Supporting the Flexibility of IPIP-Based Instruments

    OpenAIRE

    Vuyk, M. Alexandra; University of Kansas; Ingram IV, Paul B.; University of Kansas; Multon, Karen D.; University of Kansas; Warlick, Craig A.; University of Kansas

    2016-01-01

    This study examined ways to improve fit and interpretive capacity of the M5-50, an IPIP-based personality instrument, using the Openness/Intellect model (O/I) given a history of poor performance of the M5-50 Openness scale (Author, 2013; Socha, Cooper, & McCord, 2010). With participants from Amazon’s MTurk (n = 305), theoretical models for the five-factor model, Openness as a 10-item single factor, and the O/I model were tested and fitted poorly After removing one problematic item, the O/I m...

  10. Complete genome sequences of Brucella melitensis strains M28 and M5-90, with different virulence backgrounds.

    Science.gov (United States)

    Wang, Fangkun; Hu, Sen; Gao, Yuzhe; Qiao, Zujian; Liu, Wenxing; Bu, Zhigao

    2011-06-01

    Brucella melitensis is a Gram-negative coccobacillus bacteria belonging to the Alphaproteobacteria subclass. It is an important zoonotic pathogen that causes brucellosis, a disease affecting sheep, cattle, and sometimes humans. The B. melitensis strain M5-90, a live attenuated vaccine cultured from the B. melitensis virulent strain M28, has been an effective tool to control brucellosis in goats and sheep in China. Here we report the complete genome sequences of B. melitensis M28 and M5-90, strains with different virulence backgrounds, which will serve as a valuable reference for future studies.

  11. Dynamically Triggered Earthquakes in the Geysers Region following the 2014 M6.0 South Napa Earthquake

    Science.gov (United States)

    Meng, X.; Peng, Z.; Aiken, C.; Kilb, D.

    2014-12-01

    The 08/24/2014 M6.0 South Napa earthquake is the largest seismic event to strike the San Francisco Bay Area since the 10/17/1989 M6.9 Loma Prieta earthquake. The South Napa event caused severe damage near the epicenter. Based on the Northern California Seismic Network (NCSN) catalog, we find a clear increase of seismicity near the Geysers Geothermal Field following the South Napa event, which is located along its rupture directivity path ~50 km NNW from the hypocenter. Visually inspecting 10 Hz high-pass filtered waveforms at seismic stations near Geysers, we can identify many local earthquakes during the surface waves of the mainshock event that are missing from the NCSN catalog. To obtain a more complete catalog, we apply a recently developed matched filter technique to detect new events within continuous seismic recordings from 74 seismic stations near the Geysers. We use 4000 local earthquakes listed in the NCSN catalog from 06/01/2014 to 09/10/2014 as templates and systematically scan continuous data within ±7 days from the South Napa mainshock. As a result, we detect ~10 times more earthquakes than in the NCSN catalog, and the magnitude of completeness reduces from 0.75 to -0.6. Of the 8091 new events, 28 occurred within the mainshock wavetrain. Depending on the filter used, the first triggered event has an inferred magnitude in the range 3.6-4.0. The intensive seismic activity near the Geysers gradually decays with a p-value of ~0.7 and returns to pre-shock level in about one day. We fit the seismicity rate in the week prior to the South Napa event with the Epidemic Type Aftershock Sequence (ETAS) model and extrapolate to obtain a post-mainshock rate. The observed post-mainshock seismicity rate clearly deviates from the ETAS prediction, which suggests that not all increased seismicity near the Geysers can be explained as aftershocks of the first triggered event. Instead these new events may be associated with stress transients (e.g. creep) or fluid

  12. Therapeutical Administration of Peptide Pep19-2.5 and Ibuprofen Reduces Inflammation and Prevents Lethal Sepsis.

    Directory of Open Access Journals (Sweden)

    Lena Heinbockel

    Full Text Available Sepsis is still a major cause of death and many efforts have been made to improve the physical condition of sepsis patients and to reduce the high mortality rate associated with this disease. While achievements were implemented in the intensive care treatment, all attempts within the field of novel therapeutics have failed. As a consequence new medications and improved patient stratification as well as a thoughtful management of the support therapies are urgently needed. In this study, we investigated the simultaneous administration of ibuprofen as a commonly used nonsteroidal anti-inflammatory drug (NSAID and Pep19-2.5 (Aspidasept, a newly developed antimicrobial peptide. Here, we show a synergistic therapeutic effect of combined Pep19-2.5-ibuprofen treatment in an endotoxemia mouse model of sepsis. In vivo protection correlates with a reduction in plasma levels of both tumor necrosis factor α and prostaglandin E, as a likely consequence of Pep19-2.5 and ibuprofen-dependent blockade of TLR4 and COX pro-inflammatory cascades, respectively. This finding is further characterised and confirmed in a transcriptome analysis of LPS-stimulated human monocytes. The transcriptome analyses showed that Pep19-2.5 and ibuprofen exerted a synergistic global effect both on the number of regulated genes as well as on associated gene ontology and pathway expression. Overall, ibuprofen potentiated the anti-inflammatory activity of Pep19-2.5 both in vivo and in vitro, suggesting that NSAIDs could be useful to supplement future anti-sepsis therapies.

  13. Apply ETAS in Earthquake Early Warning - A case study of M6.0 South Napa Earthquake

    Science.gov (United States)

    Yin, L.; Heaton, T. H.

    2014-12-01

    Earthquake Early Warning (EEW) is a trade-off between time and accuracy. We aim to increase the alerting time without loosing its reliability. This can be achieved by using prior information to classify a pick to be a true or false event, then issue alerts immediately after the first trigger. Since earthquakes cluster in time and location, potential aftershock occurrences can be predicted using the Epidemic-Type Aftershock Sequence Model (ETAS). We show that by applying the prior information provided by ETAS in the Bayesian updating process of EEW, we can significantly improve the alerting time. As an example, the epicenter estimation for the aftershock events from the M6.0 South Napa Earthquake is performed using ETAS to illustrate the accuracy of aftershock prediction. For instance, in an aftershock sequence, the most triggers at the closest stations will turn out to be real earthquake. As a result, during the aftershock sequence of the South Napa earthquake, warnings can be issued after observations of only one or two stations.

  14. Investigation of the M6.6 Niigata-Chuetsu Oki, Japan, earthquake of July 16, 2007

    Science.gov (United States)

    Kayen, Robert; Collins, Brian D.; Abrahamson, Norm; Ashford, Scott; Brandenberg, Scott J.; Cluff, Lloyd; Dickenson, Stephen; Johnson, Laurie; Tanaka, Yasuo; Tokimatsu, Kohji; Kabeyasawa, Toshimi; Kawamata, Yohsuke; Koumoto, Hidetaka; Marubashi, Nanako; Pujol, Santiago; Steele, Clint; Sun, Joseph I.; Tsai, Ben; Yanev, Peter; Yashinsky, Mark; Yousok, Kim

    2007-01-01

    The M6.6 mainshock of the Niigata Chuetsu Oki (offshore) earthquake occurred at 10:13 a.m. local time on July 16, 2007, and was followed by a sequence of aftershocks that were felt during the entire time of the reconnaissance effort. The mainshock had an estimated focal depth of 10 km and struck in the Japan Sea offshore Kariwa. Analysis of waveforms from source inversion studies indicates that the event occurred along a thrust fault with a NE trend. The fault plane is either a strike of 34 degrees with a dip of 51 degrees or a strike of 238 degrees with a dip of 41 degrees. Which of these two planes is associated with the mainshock rupture is unresolved, although attenuation relationship analysis indicates that the northwest-dipping fault is favored. The quake affected an approximately 100-km-wide area along the coastal areas of southwestern Niigata prefecture. The event triggered ground failures as far as the Unouma Hills, located in central Niigata approximately 50 km from the shore and the source area of the 2004 Niigata Chuetsu earthquake. The primary event produced tsunami run-ups that reached maximum runup heights of about 20 centimeters along the shoreline of southern Niigata Prrefecture.

  15. Brief Communication: An exclusive example of surface latent heat flux variation before Russia M6.1 earthquake

    Directory of Open Access Journals (Sweden)

    Y. Jie

    2014-01-01

    Full Text Available Recently surface latent heat flux (SLHF data is widely used to study the anomalies before earthquakes. Most researches use the daily SLHF data, here we use both daily data and high temporal resolution (four times one day SLHF data, and compare the SLHF change with satellite image at the first time. We check the data from 1 September to 30 October 2011 and the result shows that there is really a very high SLHF anomaly (bigger than 2 σ just 5 days before the M6.1 Russia earthquake which occurred on 14 October 2011. It should be considered as a preseismic precursor if judged with previously published methods. But our comparison between SLHF change and satellite image shows that the SLHF anomaly is just caused by a thick cloud. This result tells us that scientists must know the data's meaning before they use it, if not, they may get a wrong conclusion. Based on this example, we suggest that previously published SLHF anomaly before earthquake should be reanalyzed by our method to exclude the false anomaly.

  16. Source parameters of the M 6.5 Skyros Island (North Aegean Sea earthquake of July 26, 2001

    Directory of Open Access Journals (Sweden)

    A. Kiratzi

    2002-06-01

    Full Text Available Teleseismic body wave modelling, time domain moment tensor inversion of regional waveforms and spectral analysis of the far-field P-wave pulses are used to derive the source parameters of the July 26, 2001 Skyros earthquake (M 6.5. Its epicentre is located south of the Sporades Islands in the North Aegean Sea (Greece. Previous focal mechanism solutions indicate motion on strike-slip faults. The time domain moment tensor inversion is applied for the first time to the regional waveforms of the recently established broadband network in Greece. Its application gave results which are highly consistent with teleseismic waveform modelling. The results of this study, in combination with the distribution of aftershocks, indicate left-lateral strike slip motion on a NW-SE striking fault with parameters: fault plane (strike = 151°, dip = 83°, rake = 7° and auxiliary plane (strike = 60°, dip = 84°, rake = 173°, depth 12 km and M 0 = 5.98e18 N m. Moreover, the time domain moment tensor inversion technique yielded a pure double couple source with negligible CLVD. The spectral analysis of the far-field P-wave pulses resulted in a fault length L ~ 32 km, stress drop ~ 9 bars and average displacement u ~ 30 cm.These values are in very good agreement with those estimated from empirical scaling relations applicable to the Aegean area.

  17. Validation of a ground motion synthesis and prediction methodology for the 1988, M=6.0, Saguenay Earthquake

    Energy Technology Data Exchange (ETDEWEB)

    Hutchings, L.; Jarpe, S.; Kasameyer, P.; Foxall, W.

    1998-01-01

    We model the 1988, M=6.0, Saguenay earthquake. We utilize an approach that has been developed to predict strong ground motion. this approach involves developing a set of rupture scenarios based upon bounds on rupture parameters. rupture parameters include rupture geometry, hypocenter, rupture roughness, rupture velocity, healing velocity (rise times), slip distribution, asperity size and location, and slip vector. Scenario here refers to specific values of these parameters for an hypothesized earthquake. Synthetic strong ground motion are then generated for each rupture scenario. A sufficient number of scenarios are run to span the variability in strong ground motion due to the source uncertainties. By having a suite of rupture scenarios of hazardous earthquakes for a fixed magnitude and identifying the hazard to the site from the one standard deviation value of engineering parameters we have introduced a probabilistic component to the deterministic hazard calculation, For this study we developed bounds on rupture scenarios from previous research on this earthquake. The time history closest to the observed ground motion was selected as a model for the Saguenay earthquake.

  18. Preliminary simulation of a M6.5 earthquake on the Seattle Fault using 3D finite-difference modeling

    Science.gov (United States)

    Stephenson, William J.; Frankel, Arthur D.

    2000-01-01

    A three-dimensional finite-difference simulation of a moderate-sized (M 6.5) thrust-faulting earthquake on the Seattle fault demonstrates the effects of the Seattle Basin on strong ground motion in the Puget lowland. The model area includes the cities of Seattle, Bremerton and Bellevue. We use a recently developed detailed 3D-velocity model of the Seattle Basin in these simulations. The model extended to 20-km depth and assumed rupture on a finite fault with random slip distribution. Preliminary results from simulations of frequencies 0.5 Hz and lower suggest amplification can occur at the surface of the Seattle Basin by the trapping of energy in the Quaternary sediments. Surface waves generated within the basin appear to contribute to amplification throughout the modeled region. Several factors apparently contribute to large ground motions in downtown Seattle: (1) radiation pattern and directivity from the rupture; (2) amplification and energy trapping within the Quaternary sediments; and (3) basin geometry and variation in depth of both Quaternary and Tertiary sediments

  19. GPS station short-term dynamic characteristics of micro displacement before Menyuan M6.4 earthquake

    Directory of Open Access Journals (Sweden)

    Wei Feng

    2016-07-01

    Full Text Available Continuous observation data from 24 GPS stations are selected in the area (33.0°N–41.0°N, 95.0°E–105.0°E for this study (the period is from Jan. 1, 2015 to Jan. 20, 2016. Three components, NS, EW and UD, of the daily solutions are filtered by the Hilbert–Huang transform (HHT with frequency band of 5.787 × 10−7–7.716 × 10−8 Hz (20–150 days in period. And short-term dynamic characteristics of micro displacement before Menyuan M6.4 earthquake are studied by using the temporal dependencies and cross spectrum analysis. The results show that before the earthquake the horizontal undulatory motions are higher than the average level in the series data which indicate the disturbance feature of regional stress before the earthquake. Three GPS stations on Qinghai-Tibet Plateau with their setting perpendicular to the seismogenic fault have consistent movement. The increase of amplitude of the horizontal micro motion observed before the quake is conducive to the earthquake occurrence. However, we could not be sure if the undulatory motion triggered the earthquake. It is quite necessary to build more GPS continuous observation stations and optimize the monitoring network so as to improve the understanding of the short-term dynamic crustal variation before earthquake.

  20. Investigation of the Three-Dimensional Hinge Moment Characteristics Generated by the ONERA-M6 Wing with an Aileron

    Directory of Open Access Journals (Sweden)

    G. Q. Zhang

    2013-01-01

    Full Text Available The hinge moment characteristics for ONERA-M6 wing with aileron configuration have been investigated numerically based on the different gaps and deflecting angles. The results show that the effects on the wing made by the deflecting aileron are notable. Comparing with the nonaileron case, the chordwise pressure coefficient distribution for the wing with aileron has shown the totally different trends. The small gap can force the air flow through and form the extremely strong spraying flow. It can directly destroy the previously formed leading edge vortex (LEV. Due to the presence of the positive deflecting angle, the trailing edge vortex (TEV will begin to generate at the trailing edge of the aileron. The induced secondary LEV will be mixed with the developing TEVs and form the stronger TEVs at the downstream position. Comparing with the subsonic flow, the curve for the supersonic flow has shown a good linear. The corresponding hinge moments are also extremely sensitive to the changing angle of attack, and the slope of curves is also bigger than that of the subsonic flow. The bigger gap and deflecting angle can result in the curve of hinge moment bending upward at high angle of attack. The corresponding pressure cloud and streamlines have also been obtained computationally and analyzed in detail.

  1. Database of potential sources for earthquakes larger than M 5.5 in Italy. Version 2.0-2001

    Energy Technology Data Exchange (ETDEWEB)

    Valensise, G.; Pantatosti, D. [Istituto Nazionale di Geofisica e Vulcanologia, Rome (Italy)

    2001-07-01

    This volume presents and describes Version 2.0 of the Database of potential sources for earthquakes larger than M 5.5 in Italy (also referred to as DISS, the acronym of the short form database of Italy's seismogenic sources, or simply as database) that was first conceived at the Istituto Nazionale di Geofisica e Vulcanologia of Rome in 1996.

  2. Effect of Carburizing and Hardening Temperature on the Endurance of Forming Dies from Steel R6M5

    Science.gov (United States)

    Stepankin, I. N.; Ken'ko, V. M.; Boiko, A. A.

    2013-07-01

    Results of a study of the effect of carburizing of the forming surfaces of cold upset dies from high-speed steel R6M5 and of the hardening temperature on the structure and properties of the dies are presented. It is shown that the hardness and endurance of the carburized tools can be raised by hardening from lower temperatures.

  3. A Study of confinement for $Q\\bar{Q}$ potentials on D3, M2 & M5 branes

    CERN Document Server

    Quijada, Edward

    2016-01-01

    We study analytically and numerically the interaction potentials between a pair of quark an anti-quark on D3, M2 and M5 branes. These potentials are obtained using Maldacena's method involving Wilson loops and present confining and non-confining behaviours in different situations that we explore in this work.

  4. Protein hydrolysate-induced cholecystokinin secretion from enteroendocrine cells is indirectly mediated by the intestinal oligopeptide transporter PepT1.

    Science.gov (United States)

    Liou, Alice P; Chavez, Diana I; Espero, Elvis; Hao, Shuzhen; Wank, Stephen A; Raybould, Helen E

    2011-05-01

    Dietary protein is a major stimulant for cholecystokinin (CCK) secretion by the intestinal I cell, however, the mechanism by which protein is detected is unknown. Indirect functional evidence suggests that PepT1 may play a role in CCK-mediated changes in gastric motor function. However, it is unclear whether this oligopeptide transporter directly or indirectly activates the I cell. Using both the CCK-expressing enteroendocrine STC-1 cell and acutely isolated native I cells from CCK-enhanced green fluorescent protein (eGFP) mice, we aimed to determine whether PepT1 directly activates the enteroendocrine cell to elicit CCK secretion in response to oligopeptides. Both STC-1 cells and isolated CCK-eGFP cells expressed PepT1 transcripts. STC-1 cells were activated, as measured by ERK(1/2) phosphorylation, by both peptone and the PepT1 substrate Cefaclor; however, the PepT1 inhibitor 4-aminomethyl benzoic acid (AMBA) had no effect on STC-1 cell activity. The PepT1-transportable substrate glycyl-sarcosine dose-dependently decreased gastric motility in anesthetized rats but had no affect on activation of STC-1 cells or on CCK secretion by CCK-eGFP cells. CCK secretion was significantly increased in response to peptone but not to Cefaclor, cephalexin, or Phe-Ala in CCK-eGFP cells. Taken together, the data suggest that PepT1 does not directly mediate CCK secretion in response to PepT1 specific substrates. PepT1, instead, may have an indirect role in protein sensing in the intestine.

  5. PEP-3与HBc融合原核表达载体的构建与表达%The construction and expression of the prokaryotic expression vector of HBc-VLPs displaying PEP-3 peptide

    Institute of Scientific and Technical Information of China (English)

    杨星; 陈皓; 叶明付; 代鑫; 夏海滨

    2015-01-01

    Hepatitis B virus core protein like particles(HBc-VLPs),which have a strong immune response and present the high copy number of antigen epitope,were used as epitope carriers.By taking methods of molecular biology,a white/blue screening element Lac Zαwas placed into the major immunodominant region of HBc-VLPs,and the prokaryotic expression vector for HBc con-taining the epitope peptide was constructed.Based on the vector,the prokaryotic expression vec-tor of HBc/PEP-3 was constructed by replacing Lac Zαelement with PEP-3 peptide consisting of 1 3 amino acids,then the expression and purification of fusion protein HBc/PEP-3 were success-fully carried out.The construction of the new universal vector will provide an efficient tool for the research and application of peptide vaccine.%以可诱导较强免疫反应及呈现高拷贝抗原小肽的乙肝病毒核心蛋白(Hepatitis B Virus Core Protein,HBc)类病毒颗粒(Virus-like Particles,VLPs)作为免疫载体蛋白,通过分子生物学手段,将蓝白班筛选元件Lac Zα插入 HBc的主要免疫显性区域,构建获得外源小肽与 HBc融合的通用原核表达载体。在此通用载体的基础上,通过 PEP-3小肽替换 Lac Zα片段,构建了 PEP-3与 HBc融合原核表达载体,并成功进行了 HBc/PEP-3融合蛋白的表达及纯化。该新型通用载体的成功构建,将为小肽疫苗的研究及应用提供有效工具。

  6. Structure of PEP-PEO block copolymer micelles: Exploiting the complementarity of small-angle X-ray scattering and static light scattering

    DEFF Research Database (Denmark)

    Jensen, Grethe Vestergaard; Shi, Qing; Hernansanz, María J.

    2011-01-01

    . The present work shows that the same information can be obtained by combining static light scattering (SLS) and small-angle X-ray scattering (SAXS), which provide information on, respectively, large and short length scales. Micelles of a series of block copolymers of poly(ethylene propylene)-b-poly(ethylene...... oxide) (PEP-PEO) in a 70% ethanol solution are investigated. The polymers have identical PEP blocks of 5.0 kDa and varying PEO blocks of 2.8-49 kDa. The SLS contrasts of PEP and PEO are similar, providing a homogeneous contrast, making SLS ideal for determining the overall micelle morphology. The SAXS...

  7. The plastid redox insensitive 2 mutant of Arabidopsis is impaired in PEP activity and high light-dependent plastid redox signalling to the nucleus

    DEFF Research Database (Denmark)

    Kindgren, Peter; Kremnev, Dmitry; Blanco, Nicolás E

    2012-01-01

    involved in redox-mediated retrograde signalling. The allelic mutants prin2-1 and prin2-2 demonstrated a misregulation of photosynthesis-associated nuclear gene expression in response to excess light, and an inhibition of photosynthetic electron transport. As a consequence of the misregulation of LHCB1...... is required for full expression of genes transcribed by the plastid-encoded RNA polymerase (PEP). Similarly to the prin2 mutants, the ys1 mutant with impaired PEP activity also demonstrated a misregulation of LHCB1.1 and LHCB2.4 expression in response to excess light, suggesting a direct role for PEP activity...

  8. Changing M3G/M6G ratios and pharmacodynamics in a cancer patient during long-term morphine treatment

    DEFF Research Database (Denmark)

    Andersen, Gertrud; Christrup, Lona Louring; Sjøgren, Per;

    2002-01-01

    A cancer patient receiving long-term oral sustained-release morphine treatment and periodically presenting with unusually high plasma M3G/M6G ratios is described. We found the patient's formation of M6G more unstable and perhaps delayed compared to the formation of M3G. There is no apparent...... explanation for this phenomenon and the high M3G/M6G ratios had no implications for the patient's pain experience or side effects from the morphine treatment....

  9. Heterogeneous stress field in the source area of the 2003 M6.4 Northern Miyagi Prefecture, NE Japan, earthquake

    Science.gov (United States)

    Yoshida, Keisuke; Hasegawa, Akira; Okada, Tomomi

    2016-07-01

    We investigated a detailed spatial distribution of principal stress axis orientations in the source area of the 2003 M6.4 Northern Miyagi Prefecture earthquake that occurred in the forearc of northeastern Japan. Aftershock hypocentres were precisely relocated by applying the double difference method to arrival time data obtained at temporary stations as well as at surrounding routine stations. We picked many P-wave polarity data from seismograms at these stations, which enabled us to obtain 312 well-determined focal mechanism solutions. Stress tensor inversions were performed by using these focal mechanism data. The results show that quite a lot of focal mechanisms are difficult to explain by the uniform stress field, especially near the large slip area of the main-shock rupture. Stress tensor inversions at the location of individual earthquakes show that σ1 axes are orientated mainly to WSW-ENE in the northern part of the source area, while they are oriented to NW-SE in the southern part. This spatial pattern is roughly similar to those of the static stress change by the main shock, which suggests that the observed spatially heterogeneous stress field was formed by the static stress change. If this is the case, the deviatoric stress magnitude before the main shock was very small. Another possibility is the heterogeneous stress field observed after the main shock had existed even before the main shock, although we do not know why it was formed. Unfavourable orientation of the main shock fault with respect to this stress field suggests that the fault is not strong in this case too.

  10. Evolution of Photospheric Flow and Magnetic Fields Associated with the 2015 June 22 M6.5 Flare

    Science.gov (United States)

    Wang, Jiasheng; Liu, Chang; Deng, Na; Wang, Haimin

    2017-08-01

    The evolution of photospheric flow and magnetic fields before and after flares can provide important information regarding the flare triggering and back reaction processes. However, such studies on the flow field are rare due to the paucity of high-resolution observations covering the entire flaring period. Here we study the structural evolution of penumbra and shear flows associated with the 2015 June 22 M6.5 flare in NOAA AR 12371, using high-resolution imaging observation in the TiO band taken by the 1.6 m New Solar Telescope at Big Bear Solar Observatory, with the aid of the differential affine velocity estimator(DAVE) method for flow tracking. The accompanied photospheric vector magnetic field changes are also analyzed using data from the Helioseismic and Magnetic Imager. As a result, we found, for a penumbral segment in the negative field adjacent to the magnetic polarity inversion line (PIL), an enhancement of penumbral flows (up to ~2 km s-1) and extension of penumbral fibrils after the first peak of the flare hard X-ray (HXR) emission. We also found a shear flow region at the PIL, which is co-spatial with a precursor brightening kernel and exhibits a gradual increase of shear flow velocity (up to ~0.9 km s-1) after the flare. The enhancing penumbral and shear flow regions are also accompanied by an increase of horizontal field and decrease of magnetic inclination angle. These results are discussed in the context of the theory of back reaction of coronal restructuring on the photosphere as a result of flare energy release.

  11. A single methyltransferase YefA (RlmCD) catalyses both m5U747 and m5U1939 modifications in Bacillus subtilis 23S rRNA

    DEFF Research Database (Denmark)

    Desmolaize, Benoit; Fabret, Céline; Brégeon, Damien;

    2011-01-01

    . However, as previously shown, the m(5)U54 modification in B. subtilis tRNAs is catalysed in a fundamentally different manner by the folate-dependent enzyme TrmFO, which is unrelated to the E. coli TrmA. Here, we show that methylation of U747 and U1939 in B. subtilis rRNA is catalysed by a single enzyme...

  12. PEP Integrated Test D Run Report Caustic and Oxidative Leaching in UFP-VSL-T02A

    Energy Technology Data Exchange (ETDEWEB)

    Sevigny, Gary J.; Bredt, Ofelia P.; Burns, Carolyn A.; Kurath, Dean E.; Geeting, John GH; Golovich, Elizabeth C.; Guzman-Leong, Consuelo E.; Josephson, Gary B.

    2009-12-11

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed and operated as part of a plan to respond to issue M12, "Undemonstrated Leaching Processes" of the External Flowsheet Review Team (EFRT) issue response plan. The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing. Two operating scenarios are currently being evaluated for the ultrafiltration process (UFP) and leaching operations. The first scenario (Test B and D) has caustic leaching performed in the UFP-2 ultrafiltration feed vessels (i.e., vessel UFP-VSL-T02A in the PEP and vessels UFP-VSL-00002A and B in the WTP PTF). The second scenario (Test A) has caustic leaching conducted in the UFP-1 ultrafiltration feed preparation vessels (i.e., vessels UFP-VSL-T01A and B in the PEP and vessels UFP VSL-00001A and B in the WTP PTF). In Test D, 19M sodium hydroxide (NaOH, caustic) was added to the waste slurry in the UFP VSL T02 vessel after the solids were concentrated to ~20% undissolved solids. The NaOH was added to leach solid aluminum compounds (e.g., gibbsite, boehmite). Caustic addition is followed by heating to 85°C using direct injection of steam to accelerate the leach process. The main difference of Test D compared to Test B is that the leach temperature is 85°C for 24 hrs as compared to 100°C for 12 hours. The other difference is the Test D simulant had Cr in the

  13. ESSReS-PEP, an international and interdisciplinary postgraduate education concept on Earth and Environmental Sciences

    Science.gov (United States)

    Grosfeld, Klaus; Lohmann, Gerrit; Ladstätter-Weißenmayer, Annette; Burrows, John

    2013-04-01

    Promoting young researchers is a major priority of the German Helmholtz Association. Since more than five years graduate and postgraduate education in the field of Earth System and Environmental Science has been established in Bremen and Bremerhaven, north-western Germany. Using the network and collaboration of experts and specialists on observational and paleoclimate data as well as on statistical data analysis and climate modelling from two Universities and the Helmholtz research institute on Polar and Marine Research, master and PhD students are trained to understand, decipher and cope with the challenges of recent climate change on an highly interdisciplinary and inter-institutional level. The existing research infrastructure at the Alfred Wegener Institute in Bremerhaven (AWI), University of Bremen, and Jacobs University Bremen offers a unique research environment to study past, present and future changes of the climate system, with special focus on high latitudinal processes. It covers all kind of disciplines, climate science, geosciences and biosciences, and provides a consistent framework for education and qualification of a new generation of expertly trained, internationally competitive master and PhD students. On postgraduate level, the Postgraduate Programme Environmental Physics (PEP) at the University of Bremen (www.pep.uni-bremen.de) educates the participants on the complex relationship between atmosphere, hydrosphere (ocean), cryosphere (ice region) and solid earth (land). Here, the learning of experimental methods in environmental physics at the most advanced level, numerical data analysis using supercomputers, and data interpretation via sophisticated methods prepare students for a scientific career. Within cooperation with the Ocean University of China (OUC) students are participating one year in the PEP programme during their master studies since 2006, to get finally a double degree of both universities. At the Alfred Wegener Institute for Polar

  14. Near-Field Deformation Associated with the South Napa Earthquake (M 6.0) Using Differential Airborne LiDAR

    Science.gov (United States)

    Hudnut, K. W.; Glennie, C. L.; Brooks, B. A.; Hauser, D. L.; Ericksen, T.; Boatwright, J.; Rosinski, A.; Dawson, T. E.; Mccrink, T. P.; Mardock, D. K.; Hoirup, D. F., Jr.; Bray, J.

    2014-12-01

    Pre-earthquake airborne LiDAR coverage exists for the area impacted by the M 6.0 South Napa earthquake. The Napa watershed data set was acquired in 2003, and data sets were acquired in other portions of the impacted area in 2007, 2010 and 2014. The pre-earthquake data are being assessed and are of variable quality and point density. Following the earthquake, a coalition was formed to enable rapid acquisition of post-earthquake LiDAR. Coordination of this coalition took place through the California Earthquake Clearinghouse; consequently, a commercial contract was organized by Department of Water Resources that allowed for the main fault rupture and damaged Browns Valley area to be covered 16 days after the earthquake at a density of 20 points per square meter over a 20 square kilometer area. Along with the airborne LiDAR, aerial imagery was acquired and will be processed to form an orthomosaic using the LiDAR-derived DEM. The 'Phase I' airborne data were acquired using an Optech Orion M300 scanner, an Applanix 200 GPS-IMU, and a DiMac ultralight medium format camera by Towill. These new data, once delivered, will be differenced against the pre-earthquake data sets using a newly developed algorithm for point cloud matching, which is improved over prior methods by accounting for scan geometry error sources. Proposed additional 'Phase II' coverage would allow repeat-pass, post-earthquake coverage of the same area of interest as in Phase I, as well as an addition of up to 4,150 square kilometers that would potentially allow for differential LiDAR assessment of levee and bridge impacts at a greater distance from the earthquake source. Levee damage was reported up to 30 km away from the epicenter, and proposed LiDAR coverage would extend up to 50 km away and cover important critical lifeline infrastructure in the western Sacramento River delta, as well as providing full post-earthquake repeat-pass coverage of the Napa watershed to study transient deformation.

  15. Hard X-ray and Microwave Simulation of 2015-06-22 M6.6 flare

    Science.gov (United States)

    Kuroda, Natsuha; Wang, Haimin; Gary, Dale E.; Fleishman, Gregory D.; Nita, Gelu M.; Chen, Bin; Xu, Yan; Jing, Ju

    2016-05-01

    It is well known that the time profiles of the hard X-ray (HXR) emission and the microwave (MW) emission during the impulsive phase of the solar flare are well correlated, and this has led to the expectation that these emissions come from a common population of flare-accelerated electrons. However, the energy ranges of the electrons producing two emissions are believed to be different (below and above several hundred keV for HXR-producing and MW-producing electrons, respectively), and some studies have shown that the indices of their energy spectra may differ as well. To better understand the energy distributions of the electrons producing these emissions, we present realistic forward-fit simulations of the HXR and the MW emissions of 2015 June 22, M6.6 flare using the newly developed, IDL-based platform GX simulator. We use the 3D magnetic field model extrapolated from magnetogram data from the Helioseismic and Magnetic Imager (HMI) on board the Solar Dynamics Observatory (SDO), the images and the electron energy distribution parameters deduced from the photon spectrum from the Reuven Ramaty High Energy Solar Spectroscopic Imager (RHESSI), and the spatially integrated MW spectrum and the cross-correlated amplitude data from the Expanded Owens Valley Solar Array (EOVSA) to guide the modeling. We have observed a possible above the-loop-top HXR source in 20-25 keV image, well separated from the source seen in 6-12 keV that is typically interpreted as a thermal loop-top source. Therefore, we simulate the HXR emissions by combining two flux tubes at different heights: the lower loop dominated by thermal electrons and the higher loop dominated by nonthermal electrons. The MW and HXR emissions produced from the forward-fit model are compared with observations to investigate possible differences in the energy spectra of the HXR-producing and the MW-producing electrons and what they can tell us about particle acceleration.

  16. Stduy on White rot fungi (m-6) lignin enzyme activity in the W/O microemlsion%油包水(W/O)型微乳液中m-6菌木质素降解酶的研究

    Institute of Scientific and Technical Information of China (English)

    李娜; 冯贵颖; 刘晓风; 袁月祥; 闫志英; 贺蓉娜; 廖银章

    2008-01-01

    [目的]研究W/O十六烷基三甲基溴化铵(CTAB)微乳液体系和HAc-NaAc缓冲液体系中,m-6菌株固态发酵后产生的胞外木质素降解酶漆酶(Lac)、木质素过氧化物酶(Lip)、锰过氧化物酶(Mnp)酶促反应的最佳反应条件.[方法]通过分别对Lip(以2,2′-连氮-二(3-乙苯基并噻唑-磺酸)为底物)、Mnp(以MnSO4>为底物)和Lac(以藜芦醇为底物)3种木质素降解酶在W/O型CTAB微乳液体系和HAc-NaAc缓冲液体系中的酶活测定,研究不同温度、pH和底物浓度对酶促反应的影响,探讨最佳反应条件,并比较两种反应体系下的酶活.[结果]在W/O型CTAB微乳液体系中,Lip、Mnp和Lac 3种酶酶促反应的最佳条件为:温度37℃、pH分别为4.5,4.5和3.5;在HAc-NaAc缓冲液体系中,3种酶酶促反应的最佳反应条件为:温度37℃,pH分别为5.0,5.0和4.0;在两种反应体系中的最佳反应底物浓度相同,即藜芦醇、MnSO4>、2,2′-连氮-二(3-乙苯基并噻唑-磺酸)浓度分别为0.053,0.116,0.492 mmol/L.在W/O型CTAB微乳液中,Lip和Mnp酶活比其在HAc-NaAc缓冲液体系中分别提高了81.45%和36.75%,但Lac酶活却减少了2.914倍.[结论]得到了Lac、Lip和Mnp酶3种木质素降解酶在W/O型CTAB微乳液体系和HAc-NaAc缓冲液体系中的最佳反应条件,为木质纤维素的生物降解奠定了基础.

  17. YebU is a m5C methyltransferase specific for 16 S rRNA nucleotide 1407

    DEFF Research Database (Denmark)

    Andersen, Niels Møller; Douthwaite, Stephen

    2006-01-01

    The rRNAs in Escherichia coli contain methylations at 24 nucleotides, which collectively are important for ribosome function. Three of these methylations are m5C modifications located at nucleotides C967 and C1407 in 16S rRNA and at nucleotide C1962 in 23S rRNA. Bacterial rRNA modifications gener...... methyltransferase gene rsmF, and that the nomenclature system be extended to include the rRNA methyltransferases that still await identification....

  18. Results of Severe Fuel Damage Experiment QUENCH-14 with Advanced Rod Cladding M5®. (KIT Scientific Reports ; 7549)

    OpenAIRE

    STUCKERT J.; Große, M.; Stegmaier, U.; Steinbrück, M.

    2010-01-01

    The QUENCH experiments are to investigate the hydrogen release resulting from the water injection into an uncovered core of a Light Water Reactor as well as the high-temperature behavior of core materials. The QUENCH-14 experiment investigated the effect of M5® cladding material on bundle oxidation and core reflood, in comparison with the tests QUENCH-06 that used standard Zircaloy-4 and QUENCH-12 that used VVER E110-claddings.

  19. Upgrading the Digital Electronics of the PEP-II Bunch Current Monitors at the Stanford Linear Accelerator Center

    Energy Technology Data Exchange (ETDEWEB)

    Kline, Josh; /SLAC

    2006-08-28

    The testing of the upgrade prototype for the bunch current monitors (BCMs) in the PEP-II storage rings at the Stanford Linear Accelerator Center (SLAC) is the topic of this paper. Bunch current monitors are used to measure the charge in the electron/positron bunches traveling in particle storage rings. The BCMs in the PEP-II storage rings need to be upgraded because components of the current system have failed and are known to be failure prone with age, and several of the integrated chips are no longer produced making repairs difficult if not impossible. The main upgrade is replacing twelve old (1995) field programmable gate arrays (FPGAs) with a single Virtex II FPGA. The prototype was tested using computer synthesis tools, a commercial signal generator, and a fast pulse generator.

  20. Analysis of the wake field effects in the PEP-II storage rings with extremely high currents

    Energy Technology Data Exchange (ETDEWEB)

    Novokhatski, A., E-mail: novo@slac.stanford.edu; Seeman, J.; Sullivan, M.

    2014-01-21

    We present the history and analysis of different wake field effects throughout the operational life of the PEP-II SLAC B-factory. Although the impedance of the high and low energy rings is small, the intense high-current beams generated a lot of power. The effects from these wake fields are: heating and damage of vacuum beam chamber elements like RF seals, vacuum valves, shielded bellows, BPM buttons and ceramic tiles; vacuum spikes, vacuum instabilities and high detector background; and beam longitudinal and transverse instabilities. We also discuss the methods used to eliminate these effects. Results of this analysis and the PEP-II experience may be very useful in the design of new storage rings and light sources.

  1. Analysis of the wake field effects in the PEP-II storage rings with extremely high currents

    Science.gov (United States)

    Novokhatski, A.; Seeman, J.; Sullivan, M.

    2014-01-01

    We present the history and analysis of different wake field effects throughout the operational life of the PEP-II SLAC B-factory. Although the impedance of the high and low energy rings is small, the intense high-current beams generated a lot of power. The effects from these wake fields are: heating and damage of vacuum beam chamber elements like RF seals, vacuum valves, shielded bellows, BPM buttons and ceramic tiles; vacuum spikes, vacuum instabilities and high detector background; and beam longitudinal and transverse instabilities. We also discuss the methods used to eliminate these effects. Results of this analysis and the PEP-II experience may be very useful in the design of new storage rings and light sources.

  2. Design And Verification of Controllers for Coupled Bunch Instabilities Using Optimal Control Theory And Numerical Simulation: Predictions for PEP II

    Energy Technology Data Exchange (ETDEWEB)

    Hindi, Haitham; Prabhakar, Shyam; Fox, John D.; Linscott, Ivan; Teytelman, Dmitri; /SLAC

    2011-08-31

    We present a technique for the design and verification of efficient bunch-by-bunch controllers for damping longitudinal multibunch instabilities. The controllers attempt to optimize the use of available feedback amplifier power - one of the most expensive components of a feedback system - and define the limits of the closed loop system performance. Our design technique alternates between analytic computation of single bunch optimal controllers and verification on a multibunch numerical simulator. The simulator uses PEP-II parameters and identifies unstable coupled bunch modes, their growth rates and their damping rates with feedback. The results from the simulator are shown to be in reasonable agreement with analytical calculations based on the single bunch model. The technique is then used to evaluate the performance of a variety of controllers proposed for PEP-II.

  3. Robust Control of PEP Formation Rate in the Carbon Fixation Pathway of C4 Plants by a Bi-functional Enzyme

    National Research Council Canada - National Science Library

    Hart, Yuval; Mayo, Avraham E; Milo, Ron; Alon, Uri

    2011-01-01

    .... We asked how PEP formation rate, a key step in the carbon fixation pathway, might work at a precise rate, regulated by light, despite fluctuations in substrate and enzyme levels constituting and regulating this process. Results...

  4. Robust control of PEP formation rate in the carbon fixation pathway of C(4) plants by a bi-functional enzyme

    National Research Council Canada - National Science Library

    Hart, Yuval; Mayo, Avraham E; Milo, Ron; Alon, Uri

    2011-01-01

    ...) carbon fixation pathway. We asked how PEP formation rate, a key step in the carbon fixation pathway, might work at a precise rate, regulated by light, despite fluctuations in substrate and enzyme levels constituting and regulating this process...

  5. PEP Run Report for Integrated Test A, Caustic Leaching in UFP-VSL-T01A, Oxidative Leaching in UFP-VSL-T02A

    Energy Technology Data Exchange (ETDEWEB)

    Guzman-Leong, Consuelo E.; Bredt, Ofelia P.; Burns, Carolyn A.; Daniel, Richard C.; Su, Yin-Fong; Geeting, John GH; Golovich, Elizabeth C.; Josephson, Gary B.; Kurath, Dean E.; Sevigny, Gary J.; Smith, Dennese M.; Valdez, Patrick LJ; Yokuda, Satoru T.; Young, Joan K.

    2009-12-04

    Pacific Northwest National Laboratory (PNNL) was tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed and constructed and operated as part of a plan to respond to issue M12, “Undemonstrated Leaching Processes.”(a) The PEP, located in the Process Engineering Laboratory-West (PDLW) located in Richland, Washington, is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing.

  6. Pretreatment Engineering Platform (PEP) Integrated Test B Run Report--Caustic and Oxidative Leaching in UFP-VSL-T02A

    Energy Technology Data Exchange (ETDEWEB)

    Geeting, John GH; Bredt, Ofelia P.; Burns, Carolyn A.; Golovich, Elizabeth C.; Guzman-Leong, Consuelo E.; Josephson, Gary B.; Kurath, Dean E.; Sevigny, Gary J.; Aaberg, Rosanne L.

    2009-12-10

    Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed and operated as part of a plan to respond to issue M12, “Undemonstrated Leaching Processes” of the External Flowsheet Review Team (EFRT) issue response plan.( ) The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. The PEP also includes non-prototypic ancillary equipment to support the core processing.

  7. Psycho-education with problem solving (PEPS) therapy for adults with personality disorder: A pragmatic multi-site community-based randomised clinical trial

    OpenAIRE

    Duggan Conor; Adams Clive E; Williams Hywel; Moran Paul; McCrone Paul; Reilly Joseph G; Crawford Mike J; McMurran Mary; Delport Juan; Whitham Diane; Day Florence

    2011-01-01

    Abstract Background Impairment in social functioning is a key component of personality disorder. Therefore psycho-education and problem solving (PEPS) therapy may benefit people with this disorder. Psycho-education aims to educate, build rapport, and motivate people for problem solving therapy. Problem solving therapy aims to help clients solve interpersonal problems positively and rationally, thereby improving social functioning and reducing distress. PEPS therapy has been evaluated with com...

  8. Drought forecasting in eastern Australia using multivariate adaptive regression spline, least square support vector machine and M5Tree model

    Science.gov (United States)

    Deo, Ravinesh C.; Kisi, Ozgur; Singh, Vijay P.

    2017-02-01

    Drought forecasting using standardized metrics of rainfall is a core task in hydrology and water resources management. Standardized Precipitation Index (SPI) is a rainfall-based metric that caters for different time-scales at which the drought occurs, and due to its standardization, is well-suited for forecasting drought at different periods in climatically diverse regions. This study advances drought modelling using multivariate adaptive regression splines (MARS), least square support vector machine (LSSVM), and M5Tree models by forecasting SPI in eastern Australia. MARS model incorporated rainfall as mandatory predictor with month (periodicity), Southern Oscillation Index, Pacific Decadal Oscillation Index and Indian Ocean Dipole, ENSO Modoki and Nino 3.0, 3.4 and 4.0 data added gradually. The performance was evaluated with root mean square error (RMSE), mean absolute error (MAE), and coefficient of determination (r2). Best MARS model required different input combinations, where rainfall, sea surface temperature and periodicity were used for all stations, but ENSO Modoki and Pacific Decadal Oscillation indices were not required for Bathurst, Collarenebri and Yamba, and the Southern Oscillation Index was not required for Collarenebri. Inclusion of periodicity increased the r2 value by 0.5-8.1% and reduced RMSE by 3.0-178.5%. Comparisons showed that MARS superseded the performance of the other counterparts for three out of five stations with lower MAE by 15.0-73.9% and 7.3-42.2%, respectively. For the other stations, M5Tree was better than MARS/LSSVM with lower MAE by 13.8-13.4% and 25.7-52.2%, respectively, and for Bathurst, LSSVM yielded more accurate result. For droughts identified by SPI ≤ - 0.5, accurate forecasts were attained by MARS/M5Tree for Bathurst, Yamba and Peak Hill, whereas for Collarenebri and Barraba, M5Tree was better than LSSVM/MARS. Seasonal analysis revealed disparate results where MARS/M5Tree was better than LSSVM. The results highlight the

  9. Status Report and Future Plans for the PEP-II B Factory

    CERN Document Server

    Fisher, A S

    2001-01-01

    The PEP-II B Factory at SLAC has been in operation with the BABAR detector since the summer of 1999. The peak currents and luminosity steadily increased through the end of the 2000 run on October 31. By that time, 0.75 A of electrons (the design current) routinely collided with 1.4 A of positrons in 657 bunches, to give a peak luminosity of 2.6E33 cm^{-2} s^{-1}. We delivered an integrated luminosity of up to 184/pb per day and 1033 per week; BABAR logged a total of 25/fb. Three days of machine development at the end of the run raised the peak luminosity to 3.29E33, exceeding the design goal of 3.0. BABAR then logged data for an hour, starting with a peak of 3.20. Next, we achieved the design value for positron current, 2.14 A, operating without collisions. The major limitation has been growth in the size of the positron beam in the low-energy ring (LER) due to electron clouds and multipacting. Since the arcs benefit from antechambers and a TiN coating with low secondary emission, our efforts have concentrate...

  10. PepO, a CovRS-controlled endopeptidase, disrupts Streptococcus pyogenes quorum sensing.

    Science.gov (United States)

    Wilkening, Reid V; Chang, Jennifer C; Federle, Michael J

    2016-01-01

    Group A Streptococcus (GAS, Streptococcus pyogenes) is a human-restricted pathogen with a capacity to both colonize asymptomatically and cause illnesses ranging from pharyngitis to necrotizing fasciitis. An understanding of how and when GAS switches between genetic programs governing these different lifestyles has remained an enduring mystery and likely requires carefully tuned environmental sensors to activate and silence genetic schemes when appropriate. Herein, we describe the relationship between the Control of Virulence (CovRS, CsrRS) two-component system and the Rgg2/3 quorum-sensing pathway. We demonstrate that responses of CovRS to the stress signals Mg(2+) and a fragment of the antimicrobial peptide LL-37 result in modulated activity of pheromone signaling of the Rgg2/3 pathway through a means of proteolysis of SHP peptide pheromones. This degradation is mediated by the cytoplasmic endopeptidase PepO, which is the first identified enzymatic silencer of an RRNPP-type quorum-sensing pathway. These results suggest that under conditions in which the virulence potential of GAS is elevated (i.e. enhanced virulence gene expression), cellular responses mediated by the Rgg2/3 pathway are abrogated and allow individuals to escape from group behavior. These results also indicate that Rgg2/3 signaling is instead functional during non-virulent GAS lifestyles.

  11. Measurements of the Electron Cloud Density in the PEP-II Low Energy Ring

    CERN Document Server

    Byrd, J; Sonnad, K; Caspers, Friedhelm; Kroyer, T; Krasnykh, A; Pivi, M

    2009-01-01

    Clouds of low energy electrons in the vacuum beam pipes of accelerators of positively charged particle beams present a serious limitation for operation of these machines at high currents. Because of the size of these accelerators, it is difficult to probe the low energy electron clouds over substantial lengths of the beam pipe. We have developed a novel technique to directly measure the electron cloud density via the phase shift induced in a TE wave that is independently excited and transmitted over a section of the accelerator. We infer the absolute phase shift with relatively high accuracy from the phase modulation of the transmission due to the modulation of the electron cloud density from a gap in the positively charged beam. We have used this technique for the first time to measure the average electron cloud density over a 50 m straight section in the positron ring of the PEP-II collider at the Stanford Linear Accelerator Center. We have also measured the variation of the density by using low field solen...

  12. Lattice with Smaller Momentum Compaction Factor for PEP-II High Energy Ring

    CERN Document Server

    Cai, Y; Nosochkov, Yu M

    2003-01-01

    At present, the PEP-II bunch length and vertical beta function at the Interaction Point (IP) are about of the same size. To increase luminosity, it is planned to gradually reduce the IP beta function. For the maximum effect, bunch length has to be also reduced to minimize luminosity loss caused by the hourglass effect at IP. One of the methods to achieve a smaller bunch length is to reduce momentum compaction factor. This paper discusses a lattice option for the High Energy Ring, where the nominal 60 degree cells in four arcs are replaced by 90 degree cells to reduce momentum compaction factor by 30% and bunch length by 16%. The increased focusing in 90 degree cells results in 40% stronger arc quadrupoles and 150% stronger arc sextupoles due to reduced dispersion and larger chromaticity. Tracking simulations predict that dynamic aperture for this lattice will be more than 10 times the rms size of a fully coupled beam for a horizontal emittance of 30 nm and IP beta function of 1cm. The lattice modification and...

  13. Status and Early Commissioning Results for the PEP-IIB-Factory High Energy Ring

    Science.gov (United States)

    Wienands, H.-Ulrich

    1997-05-01

    The PEP-II B-Factory High Energy Ring (HER) is a 2.2 km 9 GeV electron ring for 1 A beam current, construction of which is currently being completed at SLAC. The HER beam will collide with positrons from the 3.1 GeV, 2 A Low Energy Ring which is on a one-year later schedule. The SLAC linac will serve as high-intensity, low-emittance injector for the facility. By March 1997 the HER magnet and power system will have been installed and checked out. The vacuum system---capable of absorbing 10 MW of synchrotron radiation---will be closed and evacuated. Two initial rf stations with four cavities each, sufficient to support beams up to several hundred mA, will have been installed. The beam-position monitor (BPM) system consists of about 300 button-type BPM and is capable of single-turn data acquisition. A sophisticated beam-loss monitor system using Cherenkov detectors is capable of localizing losses over a 10-6 intensity range. A phased commissioning plan has been adopted with initial beam commissioning activities scheduled to commence in spring 1997, focusing on lattice optics diagnosis and tuning. We will present our experience checking out the various accelerator systems and our beam commissioning plans. First results of beam commissioning will be presented as they are available.

  14. Design and Initial Commissioning of Beam Diagnostics for the PEP-II B Factory.

    Science.gov (United States)

    Fisher, A. S.; Alzofon, D.; Arnett, D.; Bong, E. L.; Brugnoletti, B.; Collins, B.; Daly, E.; Gioumousis, A.; Johnson, R.; Kulikov, A.; Kurita, N.; Langton, J.; McCormick, D.; Noriega, R.; Smith, S.; Smith, V.; Stege, R.; Bjork, M.; Chin, M.; Hinkson, J.; McGill, R.; Suwada, T.

    1997-05-01

    PEP-II is a 2.2-km-circumference collider with a 2.1-A, 3.1-GeV positron ring (the Low-Energy Ring) 1 m above a 1-A, 9-GeV electron ring (the High-Energy Ring); both are designed for 3 A maximum. We will describe the beam diagnostics and present initial measurements from HER commissioning, expected to start in March 1997. LER commissioning will follow in 1998. The beam size and pulse duration are measured using near-UV synchrotron light extracted by grazing-incidence mirrors that must withstand up to 200 W/cm. To measure the charge in every bucket at 60 Hz with an accuracy of ≈0.5%, the sum signal from a set of 4 pickup buttons is digitized and averaged over 256 samples per bucket. The sum is normalized to the ring current, measured by a DC current transformer. The 300 beam-position monitors per ring are multiplexed to share 171 processor modules, which use DSPs for recording positions over 1024 turns and for calibration. For diagnostics and machine protection, 100 photomultiplier-based Cherenkov detectors measure beam losses and abort the beam in case of high loss.

  15. A Non-invasive Technique for Configuring Low Level RF Feedback Loops in PEP-II

    CERN Document Server

    Teytelman, Dmitry

    2005-01-01

    The RF system of the PEP-II collider uses two fast feedback loops around each klystron and set of cavities. These loops reduce the impedance of the fundamental mode of the accelerating cavities seen by the beam, and are necessary to reduce the growth rates of longitudinal modes within the RF system bandwidth. Operation of the accelerator at high beam currents is very sensitive to the configuration of the low-level RF feedback loops. There are 7 loop control parameters that strongly influence the stability of the feedback loops and the achieved level of longitudinal impedance reduction. Diagnostic techniques for the analysis of the RF feedback via closed-loop system transfer function measurements will be presented. The model is fit to the measured closed-loop transfer function data and the extracted parameters are then used to calculate optimal tuning and corrections to the loop control elements in the physical channel. These techniques allow fine-tuning of RF feedback with stored beam as well as diagnosis of ...

  16. Precision PEP-II optics measurement with an SVD-enhanced Least-Square fitting

    Science.gov (United States)

    Yan, Y. T.; Cai, Y.

    2006-03-01

    A singular value decomposition (SVD)-enhanced Least-Square fitting technique is discussed. By automatic identifying, ordering, and selecting dominant SVD modes of the derivative matrix that responds to the variations of the variables, the converging process of the Least-Square fitting is significantly enhanced. Thus the fitting speed can be fast enough for a fairly large system. This technique has been successfully applied to precision PEP-II optics measurement in which we determine all quadrupole strengths (both normal and skew components) and sextupole feed-downs as well as all BPM gains and BPM cross-plane couplings through Least-Square fitting of the phase advances and the Local Green's functions as well as the coupling ellipses among BPMs. The local Green's functions are specified by 4 local transfer matrix components R12, R34, R32, R14. These measurable quantities (the Green's functions, the phase advances and the coupling ellipse tilt angles and axis ratios) are obtained by analyzing turn-by-turn Beam Position Monitor (BPM) data with a high-resolution model-independent analysis (MIA). Once all of the quadrupoles and sextupole feed-downs are determined, we obtain a computer virtual accelerator which matches the real accelerator in linear optics. Thus, beta functions, linear coupling parameters, and interaction point (IP) optics characteristics can be measured and displayed.

  17. Development of HyPEP, A Hydrogen Production Plant Efficiency Calculation Program

    Energy Technology Data Exchange (ETDEWEB)

    C. H. Oh; C. B. Davis; S. R. Sherman; S. Vilim; Y. J. Lee; W. J. Lee

    2006-03-01

    The Department of Energy envisions the next generation very high temperature gas-cooled reactor (VHTR) as a single-purpose or dual-purpose facility that produces hydrogen and electricity. The Ministry of Science and Technology (MOST) of the Republic of Korea also selected VHTR for the Nuclear Hydrogen Development and Demonstration (NHDD) Project. The report will address the evaluation of hydrogen and electricity production cycle efficiencies for such systems as the VHTR and NHDD, and the optimization of system configurations. Optimization of such complex systems as VHTR and NHDD will require a large number of calculations involving a large number of operating parameter variations and many different system configurations. The research will produce (a) the HyPEP which is specifically designed to be an easy-to-use and fast running tool for the hydrogen and electricity production evaluation with flexible system layout, (b) thermal hydraulic calculations using reference design, (c) verification and validation of numerical tools used in this study, (d) transient analyses during start-up operation and off-normal operation. This project will also produce preliminary cost estimates of the major components.

  18. Measurements of the Electron Cloud Density in the PEP-II Low Energy Ring

    Energy Technology Data Exchange (ETDEWEB)

    Byrd, John; De Santis, Stefano; Sonnad, Kiran; Caspers, Fritz; Kroyer, Tom; Krasnykh, Anatoly; Pivi, Mauro

    2008-06-01

    Clouds of low energy electronsin the vacuum beam pipes of accelerators of positively charged particle beams present a serious limitation for operation of these machines at high currents. Because of the size of these accelerators, it is difficult to probe the low energyelectron clouds over substantial lengths of the beam pipe. We have developed a novel technique to directly measure the electron cloud density via the phase shift induced in a TE wave that is independently excited and transmitted over a section of the accelerator. We infer the absolute phase shift with relatively high accuracy from the phase modulation of the transmission due to the modulation of the electron cloud density from a gap in the positively charged beam. We have used this technique for the first time to measure the average electron cloud density over a 50 m straight section in the positron ring of the PEP-II collider at the Stanford Linear Accelerator Center. We have also measured the variation of the density by using low field solenoid magnets to control the electrons.

  19. Trickle-Charge: a New Operational Mode for PEP-II

    Energy Technology Data Exchange (ETDEWEB)

    Kozanecki, W.; /DSM, DAPNIA, Saclay; Colocho, W.S.; Decker, F.-J.; Ecklund, S.; Fisher, A.S.; Iverson, R.H.; O' Grady, C.; Seeman, J.; Sullivan, M.K.; Turner, J.L.; Weaver,; Wienands, U.; /SLAC

    2005-05-09

    In regular top-up-and-coast operation, PEP-II average luminosity is about 70-75% of the peak luminosity due to detector ramp-down and ramp-up times plus the time it takes to top-up both beams. We recently commissioned a new operational mode where the Low Energy Ring is injected continuously without ramping down the detector. The benefits--increased luminosity lifetime and roughly half the number of top-ups per shift--were expected to give an increase in delivered luminosity of about 15% at the same peak luminosity; this was confirmed in test runs. In routine trickle operation, however, it appears that the increase in delivered luminosity is more than twice that due to an increase in availability credited to the more stable operating conditions during trickle operation. Further gains were made when continuous injection was extended to the high energy ring as well. In this paper we will present our operational experience as well as some of the diagnostics we use to monitor and maintain tuning of the machine in order to control injection background and protect the detector.

  20. The results of the PEP `87 round robin calibration of reference solar cells and modules. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Metzdorf, J.; Wittchen, T.; Heidler, K.; Dehne, K.; Shimokawa, R.; Nagamine, F.; Ossenbrink, H.; Fornarini, L.; Goodbody, C.; Davies, M.; Emery, K.; DeBlasio, R.

    1990-11-01

    Initiated by the Photovoltaic Solar Energy Project (PEP) of the Technology, Growth and Employment Working Group of the Summit, a second international intercomparison (PEP`87 Round-Robin Calibration) on the calibration of reference solar cells and PV modules was carried out from 1987 to 1989 where PTB and ISE (FRG) served as operating agents. This report documents the final results of this intercomparison. A summary of this report was presented at the 21st IEEE Photovoltaic Specialists Conference. The round robin was required for two reasons: First, the dispersion of the results (definition, see Section 1.4) of the eight participants of the first PEP Round Robin 1984/85 where greater than expected with 2 {sigma}{sub rel} values of 5.6% and 12.2% for crystalline and amorphous Si reference cells, respectively. Second, a comparative study of calibration methods and of reference cell design and technology is required for the standardization of calibration methods and reference devices desired by the International Electrotechnical Commission (IEC TC82). Also more experience in the calibration is needed. (orig.).

  1. Development and characterization of an exposure platform suitable for physico-chemical, morphological and toxicological characterization of printer-emitted particles (PEPs).

    Science.gov (United States)

    Pirela, Sandra V; Pyrgiotakis, Georgios; Bello, Dhimiter; Thomas, Treye; Castranova, Vincent; Demokritou, Philip

    2014-06-01

    An association between laser printer use and emissions of particulate matter (PM), ozone and volatile organic compounds has been reported in recent studies. However, the detailed physico-chemical, morphological and toxicological characterization of these printer-emitted particles (PEPs) and possible incorporation of engineered nanomaterials into toner formulations remain largely unknown. In this study, a printer exposure generation system suitable for the physico-chemical, morphological, and toxicological characterization of PEPs was developed and used to assess the properties of PEPs from the use of commercially available laser printers. The system consists of a glovebox type environmental chamber for uninterrupted printer operation, real-time and time-integrated particle sampling instrumentation for the size fractionation and sampling of PEPs and an exposure chamber for inhalation toxicological studies. Eleven commonly used laser printers were evaluated and ranked based on their PM emission profiles. Results show PM peak emissions are brand independent and varied between 3000 to 1 300 000 particles/cm³, with modal diameters ranging from 49 to 208 nm, with the majority of PEPs in the nanoscale (particles from a nano-enabled product (printer toner) raises questions about health implications to users. The presented PEGS platform will help in assessing the toxicological profile of PEPs and the link to the physico-chemical and morphological properties of emitted PM and toner formulations.

  2. Hormonal regulation of dipeptide transporter (PepT1) in Caco-2 cells with normal and anoxia/reoxygenation management

    Institute of Scientific and Technical Information of China (English)

    Bing-Wei Sun; Xiao-Chen Zhao; Guang-Ji Wang; Ning Li; Jie-Shou Li

    2003-01-01

    AIM: To determine the regulation effects of recombinant human growth hormone (rhGH) on dipeptide transporter (PepT1) in Caco-2 cells with normal culture and anoxia/reoxygenation injury.METHODS: A human intestinal cell monolayer (Caco-2) was used as the in vitro model of human small intestine and cephalexin as the model substrate for dipeptide transporter (PepT1). Caco-2 cells grown on Transwell membrane filters were preincubated in the presence of rhGH in the culture medium for 4 d, serum was withdrawn from monolayers for 24 h before each experiment. The transport experiments of cephalexin across apical membromes were then conducted;Caco-2 cells grown on multiple well dishes (24 pore) with normal culture or anoxia/reoxygenation injury were preincubated with rhGH as above and uptake of cephalexin was then measured.RESULTS: The transport and uptake of cephelaxin across apical membranes of Caco-2 cells after preincubation with rhGH were significantly increased compared with controls (P=0.045, 0.0223). Also, addition of rhGH at physiological concentration (34 nM) to incubation medium greatly stimulates cephalexin uptake by anoxia/reoxygenation injuried Caco-2 cells (P=0.0116), while the biological functions of PepT1 in injured Caco-2 cells without rhGH were markedly downregulated. Northem blot analysis showed that the level of PepT1 mRNA of rhGH-treated injured Caco-2cells was greatly increased compared to controls.CONCLUSION: The present results of rhGH stimulating the uptake and transport of cephalexin indicated that rhGH greatly upregulates the physiological effects of dipeptide transporters of Caco-2 cells. The alteration in the gene expression may be a mechanism of regulation of PepT1. In addition, Caco-2 cells take up cephalexin by the Proton-dependent dipeptide transporters that closely resembles the transporters present in the intestine. Caco-2 cells represent an ideal cellular model for future studies of the dipeptide transporter.

  3. ULE design considerations for a 3m class light weighted mirror blank for E-ELT M5

    Science.gov (United States)

    Fox, Andrew; Hobbs, Tom; Edwards, Mary; Arnold, Matthew; Sawyer, Kent

    2016-07-01

    It is expected that the next generation of large ground based astronomical telescopes will need large fast-steering/tip-tilt mirrors made of ultra-lightweight construction. These fast-steering mirrors are used to continuously correct for atmospheric disturbances and telescope vibrations. An example of this is the European Extremely Large Telescope (E-ELT) M5 lightweight mirror, which is part of the Tip-Tilt/Field-Stabilization Unit. The baseline design for the E-ELT M5 mirror, as presented in the E-ELT Construction Proposal, is a closed-back ULE mirror with a lightweight core using square core cells. Corning Incorporated (Corning) has a long history of manufacturing lightweight mirror blanks using ULE in a closed-back construction, going back to the 1960's, and includes the Hubble Space Telescope primary mirror, Subaru Telescope secondary and tertiary mirrors, the Magellan I and II tertiary mirrors, and Kepler Space Telescope primary mirror, among many others. A parametric study of 1-meter class lightweight mirror designs showed that Corning's capability to seal a continuous back sheet to a light-weighted core structure provides superior mirror rigidity, in a near-zero thermal expansion material, relative to other existing technologies in this design space. Corning has investigated the parametric performance of several design characteristics for a 3-meter class lightweight mirror blank for the E-ELT M5. Finite Element Analysis was performed on several design scenarios to obtain weight, areal density, and first Eigen frequency. This paper presents an overview of Corning ULE and lightweight mirror manufacturing capabilities, the parametric performance of design characteristics for 1-meter class and 3-meter class lightweight mirrors, as well as the manufacturing advantages and disadvantages of those characteristics.

  4. Diseño del mecanismo de rotación del espejo M5 de un telescopio reflector

    OpenAIRE

    Fernández Gómez, Jorge

    2010-01-01

    El objetivo principal de este proyecto fin de carrera consiste en diseñar una solución para el desplazamiento de uno de los espejos, denominado M5 (Mirror 5), que forman el sistema óptico del telescopio E-ELT. Para mover dicho espejo se hace necesario desarrollar un mecanismo que le permita rotar 180º alrededor del eje de azimut desde una posición A, hasta una posición B, según apunte a una estación focal o a otra. El mecanismo debe de ser capaz de realizar la maniobra con rapidez, seguridad,...

  5. 重组人CREG蛋白与溶酶体组织蛋白酶和M6P/IGFⅡR的相互作用%Interactions between the recombinant human CREG protein and cathepsins and M6P/IGFIIR

    Institute of Scientific and Technical Information of China (English)

    孙鸣宇; 闫承慧; 田孝祥; 李洋; 韩雅玲

    2015-01-01

    BACKGROUND:It has been found that cel ular repressor of E1A-stimulated genes (CREG) is a lysosomal protein binding directly to the mannose-6-phosphate (M6P)/insulin-like growth factor II receptor (IGFIIR) and depends on the interaction with M6P receptors for efficient delivery to lysosomes OBJECTIVE:To study the interactions between the exogenous CREG protein and cathepsins and M6P/IGFIIR and to confirm the effect of CREG protein on expression and distribution of M6P/IGFIIR. METHODS:Double-stained immunofluorescence and coimmunoprecipitation were applied to observe the interactions between the exogenous CREG protein and cathepsin B, cathepsin L and M6P/IGFIIR. Using gain-of-function and loss-of-function approaches, the effect of CREG on expression and distribution of M6P/IGFIIR were studied by western blot assay and immunofluorescence staining. RESULTS AND CONCLUSION:Double-stained immunofluorescence and coimmunoprecipitation analyses confirmed the direct interactions between the exogenous CREG protein and cathepsin B, cathepsin L and M6P/IGFIIR. It was verified that CREG plays a critical role not in the expression but in the distribution of M6P/IGFIIR using gain-of-function and loss-of-function approaches. These findings provide evidence that exogenous CREG protein is located in lysosomes and has interactions with cathepsins and M6P/IGFIIR, also CREG plays a critical role in the distribution of M6P/IGFIIR.%背景:以往研究证实,CREG是一种与M6P/IGFⅡR直接结合的溶酶体蛋白,并依赖于与M6P受体的相互作用有效转运至溶酶体。  目的:分析外源性CREG蛋白与溶酶体组织蛋白酶和M6P/IGFⅡR的相互作用关系及其对M6P/IGFⅡR表达变化及细胞内定位的影响。  方法:应用细胞免疫荧光双染和免疫共沉淀方法,观察外源性 CREG 蛋白与溶酶体组织蛋白酶和 M6P/IGFⅡR的相互作用关系,并应用gain-of-function和loss-of-function模型,通过Western blot和细胞

  6. Thermal isocreep curves obtained during multi-axial creep tests on recrystallized Zircaloy-4 and M5™ alloy

    Energy Technology Data Exchange (ETDEWEB)

    Rautenberg, M., E-mail: mrautenb@gmail.com [AREVA, AREVA NP, 10 rue Juliette Récamier, 69456 Lyon (France); CIRIMAT, CNRS/UPS/INPT, 4 allée Emile Monso, 31030 Toulouse (France); Poquillon, D. [CIRIMAT, CNRS/UPS/INPT, 4 allée Emile Monso, 31030 Toulouse (France); Pilvin, P. [LIMATB, University Bretagne-Sud, rue de Saint-Maudé, 56321 Lorient (France); Grosjean, C. [AREVA, AREVA NP, 10 rue Juliette Récamier, 69456 Lyon (France); CIRIMAT, CNRS/UPS/INPT, 4 allée Emile Monso, 31030 Toulouse (France); Cloué, J.M. [AREVA, AREVA NP, 10 rue Juliette Récamier, 69456 Lyon (France); Feaugas, X. [LEMMA, Université de La Rochelle, Avenue Michel Crépeau, 17042 La Rochelle (France)

    2014-04-01

    Zirconium alloys are widely used in the nuclear industry. Several components, such as cladding or guide tubes, undergo strong mechanical loading during and after their use inside the pressurized water reactors. The current requirements on higher fuel performances lead to the developing on new Zr based alloys exhibiting better mechanical properties. In this framework, creep behaviors of recrystallized Zircaloy-4 and M5™, have been investigated and then compared. In order to give a better understanding of the thermal creep anisotropy of Zr-based alloys, multi-axial creep tests have been carried out at 673 K. Using a specific device, creep conditions have been set using different values of β = σ{sub zz}/σ{sub θθ}, σ{sub zz} and σ{sub θθ} being respectively the axial and hoop creep stresses. Both axial and hoop strains are measured during each test which is carried out until stationary creep is stabilized. The steady-state strain rates are then used to build isocreep curves. Considering the isocreep curves, the M5™ alloy shows a largely improved creep resistance compared to the recrystallized Zircaloy-4, especially for tubes under high hoop loadings (0 < β < 1). The isocreep curves are then compared with simulations performed using two different mechanical models. Model 1 uses a von Mises yield criterion, the model 2 is based on a Hill yield criterion. For both models, a coefficient derived from Norton law is used to assess the stress dependence.

  7. M5-branes on S^2 x M_4: Nahm's Equations and 4d Topological Sigma-models

    CERN Document Server

    Assel, Benjamin; Wong, Jin-Mann

    2016-01-01

    We study the 6d N=(0,2) superconformal field theory, which describes multiple M5-branes, on the product space S^2 x M_4, and suggest a correspondence between a 2d N=(0,2) half-twisted gauge theory on S^2 and a topological sigma-model on the four-manifold M_4. To set up this correspondence, we determine in this paper the dimensional reduction of the 6d N=(0,2) theory on a two-sphere and derive that the four-dimensional theory is a sigma-model into the moduli space of solutions to Nahm's equations, or equivalently the moduli space of k-centered SU(2) monopoles, where k is the number of M5-branes. We proceed in three steps: we reduce the 6d abelian theory to a 5d Super-Yang-Mills theory on I x M_4, with I an interval, then non-abelianize the 5d theory and finally reduce this to 4d. In the special case, when M_4 is a Hyper-Kahler manifold, we show that the dimensional reduction gives rise to a topological sigma-model based on tri-holomorphic maps. Deriving the theory on a general M_4 requires knowledge of the met...

  8. Prevalence of cardiovascular disease risk factors in migrants participating in the PEP family heart study, Nuremberg

    Directory of Open Access Journals (Sweden)

    Gerda-Maria Haas

    2010-01-01

    Full Text Available Objectives: The aim of this study was to assess the prevalence of cardiovascular risk factors in adults and their children from the 3 major groups of migrants participating in the PEP Family Heart Study [11] and to compare the cardio-metabolic risk profiles between migrants and German participants. Methods: In this community-based cross-sectional study, anthropometric data, blood pressure and lipid profiles of migrants (480 children, 363 adults from Turkey (TUR, Eastern Europe (EEU and German immigrants from the former Soviet Union (GFSU were compared with age and gender adjusted German (GER resi-dents (3253 children, 2491 adults. Results: The profile of risk factors differed considerably regarding specificity and frequency. The prevalence of ≥3 risk factors was as follows: in GFSU men 62%, women 36%, boys 19% and girls 17%; in TUR men 57%, women 30%, 15% boys and 6% girls; in GER men 48%, women 19%, boys 4% and girls 6%; for EEU men 38%, women 25% and 0% in children. No risk factor was present in GFSU men 13%, women 25%, boys 38% and girls 42%; TUR men 13%, women 28%, boys 27% and girls 22 %; GER men16%, women 45%, boys 46% and girls 41%; EEU men 17%, women 42 %, boys 29% and girls 27%. About 50% of the adults from Turkey and Eastern Europe were current smokers and one third of women and half of men from these two countries were over-weight. Conclusions: The implementation of primary care measures for the prevention of cardiovascular disease in migrants is necessary, and it should consider the ethnic differences and the heterogene-ous risk profiles.

  9. Prevalence of Cardiovascular Disease Risk Factors in Migrants Participating in the PEP Family Heart Study, Nuremberg

    Directory of Open Access Journals (Sweden)

    Gerda-Maria Haas

    2010-01-01

    Full Text Available Objectives: The aim of this study was to assess the prevalence of cardiovascularrisk factors in adults and their children from the 3 majorgroups of migrants participating in the PEP Family Heart Study 11 andto compare the cardio-metabolic risk profiles between migrants andGerman participants.Methods: In this community-based cross-sectional study, anthropometricdata, blood pressure and lipid profiles of migrants (480 children,363 adults from Turkey (TUR, Eastern Europe (EEU and Germanimmigrants from the former Soviet Union (GFSU were comparedwith age- and gender adjusted German (GER residents (3253 children,2491 adults.Results: The profile of risk factors differed considerably regardingspecificity and frequency. The prevalence of ≥3 risk factors was asfollows: in GFSU men 62%, women 36%, boys 19% and girls 17%; inTUR men 57%, women 30%, 15% boys and 6% girls; in GER men48%, women 19%, boys 4% and girls 6%; for EEU men 38%, women25% and 0% in children. No risk factor was present in GFSU men13%, women 25%, boys 38% and girls 42%; TUR men 13%, women28%, boys 27% and girls 22 %; GER men16%, women 45%, boys 46%and girls 41%; EEU men 17%, women 42 %, boys 29% and girls 27%.About 50% of the adults from Turkey and Eastern Europe were currentsmokers and one third of women and half of men from these twocountries were overweight.Conclusions: The implementation of primary care measures for theprevention of cardiovascular disease in migrants is necessary, and itshould consider the ethnic differences and the heterogeneous risk profiles

  10. Blood pressure percentiles in 22,051 German children and adolescents: The PEP Family Heart Study.

    Science.gov (United States)

    Schwandt, Peter; Scholze, Juergen E; Bertsch, Thomas; Liepold, Evelyn; Haas, Gerda M

    2015-05-01

    Strong associations between blood pressure (BP) and overweight raise the question whether overweight children (body mass index (BMI) ≥85th percentile) should be included in the normative database. Using the LMS (Lamda-Mu-Sigma) method, we developed age-, gender-, and height-adjusted percentile curves for systolic blood pressure (SBP) and diastolic blood pressure (DBP) at the 50th, 85th, 90th, 95th, and 97th percentiles in 22,051 German youths (18,917 normal-weight, 1,938 overweight, and 1,196 obese) aged 3-18 years from yearly cross-sectional surveys of the PEP Family Heart Study Nuremberg. Among children, we found no gender differences for BP and BMI. Male adolescents are taller and heavier. The mean prevalence of hypertension and obesity is 7.3% and 5.2% among children and 7.2% and 5.8% among adolescents, respectively. The prevalence of elevated BP increased substantially by weight groups achieving 24.4% in obese females and 21.9% in obese males with odds ratios of 5.9 (95% confidence interval (CI): 5.1-7.5) and 4.3 (95% CI: 3.5-5.2), respectively. The shapes of the 10 LMS-smoothed SBP and DBP percentile curves differ substantially between gender and weight group. The normal-weight percentiles are nearly identical with the overall growth charts, but separate percentiles for overweight and obese youths provide considerably higher values, such as 148/91 vs. 136/86 mm Hg for a 17-year-old male and 136/91 vs. 123/81 mm Hg for female, respectively, at the 90th percentile. Because of substantially higher BP percentiles, separate databases for overweight and obese children and adolescents are strongly recommended. © American Journal of Hypertension, Ltd 2014. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  11. Lifestyle and cardiovascular risk factors in 2001 child-parent pairs: the PEP Family Heart Study.

    Science.gov (United States)

    Schwandt, Peter; Haas, Gerda-Maria; Liepold, Evelyn

    2010-12-01

    Genes and environment are the main determinants of cardiovascular disease (CVD) risk factor clustering in families. Since individual risk factor profiles are easily predicted within families, we examined whether CVD risk factors are affected by lifestyle factors in these families. Nutrition, physical activity, and smoking habits were assessed in 2001 biological child-parent pairs from 852 families participating in the Prevention Education Program (PEP). Height, weight, body mass index, waist circumference, blood pressure, and fasting lipid levels were measured. Within-family associations were calculated using generalized estimating equations (GEE). Fathers possessed the most adverse risk profile. Daily energy consumption above the recommended levels was higher in children (daughters +35.4%, sons +26.7%) than in parents (fathers +15.7%, mothers +10.6%). Higher energy consumption was significantly associated with hypertension in mothers (OR 2.5) and in fathers (OR 1.7). Hyper-caloric nutrition of the parents predicted the energy intake of the children in: mother-daughter (OR 7.5), mother-son (OR 3.0), and father-son (OR 2.8) pairs. Low mono-unsaturated fatty acid intake was significantly associated with a high LDL/HDL-C ratio (OR 3.4) and hypertriglyceridemia (OR 2.2) in fathers. Approximately 25% of parents and children reported at least two physical activities twice a week. The 23% of children who were passive smokers presented a far more adverse risk profile than children without exposure to second-hand smoke. Intergenerational lifestyle habits affect cardiovascular risk factors within biological families. As lifestyle habits are predictable, they may be used for implementation of family-based CVD prevention strategies. Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

  12. Heterologous expression and enzymatic properties of pullulanase from Klebsiella oxytoca M5 al%产酸克雷伯氏菌M5al普鲁兰酶的异源表达及酶学性质研究

    Institute of Scientific and Technical Information of China (English)

    温亮亮; 郭佳; 关锋

    2015-01-01

    Pullulanase(EC3. 2. 1. 41),one of debranching enzymes,can specifically hydrolyze α-1,6-glucosidic bonds in starch and greatly promote starch utilization. Pullulanase is widely used in food,textile,biofuel and detergent industry. In present study,pullulanase gene pulA was amplified by PCR using genomic DNA of Klebsiella oxytoca M5al as template, then cloned into vector pET28a(+)and expressed in Escherichia coli BL21 (DE3)induced by 0. 5 mmol/L IPTG. The expression of recombinant pullulanase was confirmed by SDS-PAGE and western blot. The enzyme was purified by Ni-Agarose resin and its enzymatic properties were determined. The optimum pH and temperature of recombinant enzyme were 5. 5 and 60 ° C respectively. The activity of recombinant enzyme was significantly increased while adding Mn2+,but slightly enhanced by adding Fe3+,Mg2+ and Fe2+. The enzyme activity was greatly inhibited in the presence of Cu2+. The optimal catalytic conditions of pullulanase from Klebsiella oxytoca M5 al met the requirement of saccharification process,showing its application potential in starch industry.%普鲁兰酶(EC 3.2.1.41)是一类淀粉脱支酶,能够特异性水解淀粉中的α-1,6-糖苷键,从而提高淀粉的利用率,在以淀粉为原料的食品、纺织、生物燃料和洗涤剂等行业中具有重要的应用价值。本研究以产酸克雷伯氏菌Klebsiella oxytoca M5 al基因组DNA为模板,将PCR扩增得到的普鲁兰酶基因pulA克隆至表达载体pET28 a (+),构建好的重组质粒转化大肠杆菌Escherichia coli BL21(DE3),在培养基中添加0.5 mmol/L异丙基硫代半乳糖苷(IPTG)的条件下对该酶基因进行诱导表达,经镍柱纯化获得重组普鲁兰酶用于酶学性质研究。SDS-PAGE及Western Blot检测显示普鲁兰酶基因pulA在上述大肠杆菌宿主中成功获得了表达。该重组酶最适反应pH5 .5 ,最适温度60℃。金属离子对酶活性有一定影响。Mn2+

  13. TheQc value of coda for EryuanM 5.5 earthquake in Yunan Province in the year 2013%2013年云南洱源M 5.5地震尾波Qc值

    Institute of Scientific and Technical Information of China (English)

    高琼; 李孝宾; 陈佳; 王军

    2016-01-01

    2013年3月3日云南洱源发生M 5.5地震,选取地震发生前后洱源地震台记录的40个数字化地震波形,基于地方震尾波单次散射模型,测算震源区尾波 Qc ( f )值。结果表明,当中心频率取3.0—18 Hz时,洱源地区尾波Qc值为181.08—692.88,得到Qc值与频率f的关系为Qc(f)=87.4f0.739,表明该区属中等构造活动地区。%AnM 5.5 earthquake occurred in Eryuan of Yunnan Province on Mar.3, 2013. Using forty digital data before and after Eryuan earthquake recorded by Eryuan Seismic Station, based on the single scattering theory of coda waves for local earthquakes, theQc value of coda at the source region has been estimated. The results show that theQc value of coda waves at Eryuan region is in the range of 181.08—692.88 when central frequency is in the range of 3.0—18.0 Hz. It was obtained that the relationship between codaQc and frequencyf isQc ( f ) = 87.4f0.739 in this area, so the seismic area belongs to moderate tectonic activity area.

  14. Evidence for cleavage of the metalloprotease Vsm from Vibrio splendidus strain JZ6 by an M20 peptidase (PepT-like protein at low temperature

    Directory of Open Access Journals (Sweden)

    Rui Liu

    2016-10-01

    Full Text Available Metalloprotease Vsm is a major extracellular virulence factor of Vibrio splendidus. The toxicity of Vsm from V. splendidus strain JZ6 has been characterized, and production of this virulence factor proved to be temperature-regulated. The present study provides evidence that two forms (JZE1 and JZE2 of Vsm protein exist in extracellular products (ECPs of strain JZ6, and a significant conversion of these two forms was detected by SDS-PAGE and immunoblotting analyses of samples obtained from cells grown at 4, 10, 16, 20, 24 and 28 ℃. Mass spectroscopy confirmed that JZE1 was composed only of the peptidase_M4 domain of Vsm, and JZE2 contained both the PepSY domain and the peptidase_M4 domain. An M20 peptidase T-like protein (PepTL was screened from the transcriptome data of strain JZ6, which was considered as a crucial molecule to produce the active Vsm (JZE1 by cleavage of the propeptide. Similar to that of Vsm, PepTL mRNA accumulation was highest at 4 ℃ (836.82-fold of that at 28 ℃, decreased with increasing of temperature and reached its lowest level at 28 ℃. Deletion of the gene encoding the PepTL resulted in a mutant strain that did not produce the JZE1 cleavage product. The peptidase activity of PepTL recombinant protein (rPepTL was confirmed by cleaving the Vsm in ECPs with an in vitro degradation reaction. These results demonstrate that PepTL participates in activating Vsm in strain JZ6 by proteolytic cleavage at low temperature.

  15. The 3-D aftershock distribution of three recent M5~5.5 earthquakes in the Anza region,California

    Science.gov (United States)

    Zhang, Q.; Wdowinski, S.; Lin, G.

    2011-12-01

    The San Jacinto fault zone (SJFZ) exhibits the highest level of seismicity compared to other regions in southern California. On average, it produces four earthquakes per day, most of them at depth of 10-17 km. Over the past decade, an increasing seismic activity occurred in the Anza region, which included three M5~5.5 events and their aftershock sequences. These events occurred in 2001, 2005, and 2010. In this research we map the 3-D distribution of these three events to evaluate their rupture geometry and better understand the unusual deep seismic pattern along the SJFZ, which was termed "deep creep" (Wdowinski, 2009). We relocated 97,562 events from 1981 to 2011 in Anza region by applying the Source-Specific Station Term (SSST) method (Lin et al., 2006) and used an accurate 1-D velocity model derived from 3-D model of Lin et al (2007) and used In order to separate the aftershock sequence from background seismicity, we characterized each of the three aftershock sequences using Omori's law. Preliminary results show that all three sequences had a similar geometry of deep elongated aftershock distribution. Most aftershocks occurred at depth of 10-17 km and extended over a 70 km long segments of the SJFZ, centered at the mainshock hypocenters. A comparative study of other M5~5.5 mainshocks and their aftershock sequences in southern California reveals very different geometrical pattern, suggesting that the three Anza M5~5.5 events are unique and can be indicative of "deep creep" deformation processes. Reference 1.Lin, G.and Shearer,P.M.,2006, The COMPLOC earthquake location package,Seism. Res. Lett.77, pp.440-444. 2.Lin, G. and Shearer, P.M., Hauksson, E., and Thurber C.H.,2007, A three-dimensional crustal seismic velocity model for southern California from a composite event method,J. Geophys.Res.112, B12306, doi: 10.1029/ 2007JB004977. 3.Wdowinski, S. ,2009, Deep creep as a cause for the excess seismicity along the San Jacinto fault, Nat. Geosci.,doi:10.1038/NGEO684.

  16. Progress On Intestinal Oligopeptide Transporter PepT1 of Fishes%鱼类肠道小肽转运载体PepT1的研究进展

    Institute of Scientific and Technical Information of China (English)

    叶万里; 李英文

    2009-01-01

    从生理特性,cDNA序列和蛋白质分子结构,组织分布与表达这三个方面叙述了欧洲鳗鲡(Anguilla anguilla),罗非鱼(Oreochromis mossambicus),rockfish(Sebastes caurinus),银鱼(Chionodraco hamatus),斑马鱼(Danio rerio),亚洲泥鳅(Misgurnus anguillicaudatus),大西洋鳕鱼(Gadus morhua)和欧洲黑鲈(Dicentrarchus labrax)中有关肠道Ⅰ型肽转运载体(PepT1)方面的研究进展情况.

  17. The RNA m(6)A Reader YTHDF2 Is Essential for the Post-transcriptional Regulation of the Maternal Transcriptome and Oocyte Competence.

    Science.gov (United States)

    Ivanova, Ivayla; Much, Christian; Di Giacomo, Monica; Azzi, Chiara; Morgan, Marcos; Moreira, Pedro N; Monahan, Jack; Carrieri, Claudia; Enright, Anton J; O'Carroll, Dónal

    2017-08-30

    YTHDF2 binds and destabilizes N(6)-methyladenosine (m(6)A)-modified mRNA. The extent to which this branch of m(6)A RNA-regulatory pathway functions in vivo and contributes to mammalian development remains unknown. Here we find that YTHDF2 deficiency is partially permissive in mice and results in female-specific infertility. Using conditional mutagenesis, we demonstrate that YTHDF2 is autonomously required within the germline to produce MII oocytes that are competent to sustain early zygotic development. Oocyte maturation is associated with a wave of maternal RNA degradation, and the resulting relative changes to the MII transcriptome are integral to oocyte quality. The loss of YTHDF2 results in the failure to regulate transcript dosage of a cohort of genes during oocyte maturation, with enrichment observed for the YTHDF2-binding consensus and evidence of m(6)A in these upregulated genes. In summary, the m(6)A-reader YTHDF2 is an intrinsic determinant of mammalian oocyte competence and early zygotic development. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

  18. Effective actions and topological strings. Off-shell mirror symmetry and mock modularity of multiple M5-branes

    Energy Technology Data Exchange (ETDEWEB)

    Hecht, Michael

    2011-10-20

    This thesis addresses two different topics within the field of string theory. In the first part it is shown how Hodge-theoretic methods in conjunction with open string mirror symmetry can be used to compute non-perturbative effective superpotential couplings for type II/F-theory compactifications with D-branes and fluxes on compact Calabi-Yau manifolds. This is achieved by studying the at structure of operators which derives from the open/closed {beta}-model geometry. We analyze the variation of mixed Hodge structure of the relative cohomology induced by a family of divisors, which is wrapped by a D7-brane. This leads to a Picard-Fuchs system of differential operators, which can be used to compute the moduli dependence of the superpotential couplings as well as the mirror maps at various points in the open/closed deformation space. These techniques are used to obtain predictions for genuine A-model Ooguri-Vafa invariants of special Lagrangian submanifolds in compact Calabi-Yau geometries and real enumerative invariants of on-shell domain wall tensions. By an open/closed duality the system of differential equations can also be obtained from a gauged linear {sigma}-model, which describes a non-compact Calabi-Yau four-fold compactification without branes. This is used in the examples of multi-parameter models to study the various phases of the combined open/closed deformation space. It is furthermore shown how the brane geometry can be related to a F-theory compactification on a compact Calabi-Yau four-fold, where the Hodge-theoretic techniques can be used to compute the G-flux induced Gukov-Vafa-Witten potential. The dual F-theory picture also allows to conjecture the form of the Kaehler potential on the full open/closed deformation space. In the second part we analyze the background dependence of theories which derive from multiple wrapped M5-branes. Using the Kontsevich-Soibelman wall-crossing formula and the theory of mock modular forms we derive a holomorphic

  19. ESSReS-PEP-POLMAR, an international and interdisciplinary postgraduate education concept on Earth and Environmental Sciences

    Science.gov (United States)

    Meggers, Helge; Hanfland, Claudia; Sprengel, Claudia; Grosfeld, Klaus; Lohmann, Gerrit; Bijma, Jelle; Ladstätter-Weißenmayer, Annette; Burrows, John

    2014-05-01

    Postgraduate education is gaining increasing importance and has been identified as one instrument to foster quality and promote networking, both in research and in education. Exchange and co-operation between graduate programmes that have related topics produce added value for all. Students have access to a range of research facilities, course offers, and a broad scientific community from which they can start building their individual scientific network. Larger events like PhD conferences, career symposia or cost-intensive trainings are more easily tackled by joining forces of various players. The postgraduate programmes ESSReS-PEP-POLMAR are part of a larger network of marine and climate science programmes in the north-western region of Germany and together host up 180 (23 ESSReS, 130 POLMAR, 30 PEP) PhD/Master students in their respective programmes. Here, we will present a number of joint activities from this collaboration. Today, the PhD education is completely different to that from 15 years ago due to a variety of different scientific offerings including e.g. excursions, soft skill courses and special seminars. In the framework of the ESSReS-PEP-POLMAR concept the Postgraduate Programme Environmental Physics (PEP) at the University of Bremen educates the participants on the complex relationship between atmosphere, hydrosphere (ocean), cryosphere (ice region) and solid earth (land). Here, the learning of experimental methods in environmental physics at the most advanced level, numerical data analysis using supercomputers, and data interpretation via sophisticated methods prepare students for a scientific career. Within cooperation with the Ocean University of China (OUC) students are participating one year in the PEP programme during their master studies since 2006, to get finally a double degree of both universities. Two different ways to further graduation are currently possible at the Alfred Wegener Institute. The Helmholtz Graduate School for Polar and

  20. Mouse Maternal High-Fat Intake Dynamically Programmed mRNA m6A Modifications in Adipose and Skeletal Muscle Tissues in Offspring

    Science.gov (United States)

    Li, Xiao; Yang, Jing; Zhu, Youbo; Liu, Yuan; Shi, Xin’e; Yang, Gongshe

    2016-01-01

    Epigenetic mechanisms have an important role in the pre- and peri-conceptional programming by maternal nutrition. Yet, whether or not RNA m6A methylation—an old epigenetic marker receiving increased attention recently—is involved remains an unknown question. In this study, mouse high-fat feeding prior to conception was shown to induce overweight and glucose intolerant dams, which then continued to be exposed to a high-fat diet during gestation and lactation. The dams on a standard diet throughout the whole experiment were used as a control. Results showed that maternal high-fat intake impaired postnatal growth in male offspring, indicated by decreased body weight and Lee’s index at 3, 8 and 15 weeks old, but the percentages of visceral fat and tibialis anterior relative to the whole body weights were significantly increased at eight weeks of age. The maternal high-fat exposure significantly increased mRNA N6-methyladenosine (m6A) levels in visceral fat at three weeks old, combined with downregulated Fat mass and obesity-associated gene (FTO) and upregulated Methyltransferase like 3 (METTL3) transcription, and these changes were reversed at eight weeks of age. In the tibialis anterior muscle, the maternal high-fat diet significantly enhanced m6A modifications at three weeks, and lowered m6A levels at 15 weeks of age. Accordingly, FTO transcription was significantly inhibited at three weeks and stimulated at 15 weeks of age, and METTL3 transcripts were significantly improved at three weeks. Interestingly, both FTO and METTL3 transcription was significantly elevated at eight weeks of age, and yet the m6A modifications remained unchanged. Our study showed that maternal high-fat intake could affect mRNA m6A modifications and its related genes in offspring in a tissue-specific and development-dependent way, and provided an interesting indication of the working of the m6A system during the transmission from maternal nutrition to subsequent generations. PMID:27548155

  1. Mouse Maternal High-Fat Intake Dynamically Programmed mRNA m6A Modifications in Adipose and Skeletal Muscle Tissues in Offspring

    Directory of Open Access Journals (Sweden)

    Xiao Li

    2016-08-01

    Full Text Available Epigenetic mechanisms have an important role in the pre- and peri-conceptional programming by maternal nutrition. Yet, whether or not RNA m6A methylation—an old epigenetic marker receiving increased attention recently—is involved remains an unknown question. In this study, mouse high-fat feeding prior to conception was shown to induce overweight and glucose intolerant dams, which then continued to be exposed to a high-fat diet during gestation and lactation. The dams on a standard diet throughout the whole experiment were used as a control. Results showed that maternal high-fat intake impaired postnatal growth in male offspring, indicated by decreased body weight and Lee’s index at 3, 8 and 15 weeks old, but the percentages of visceral fat and tibialis anterior relative to the whole body weights were significantly increased at eight weeks of age. The maternal high-fat exposure significantly increased mRNA N6-methyladenosine (m6A levels in visceral fat at three weeks old, combined with downregulated Fat mass and obesity-associated gene (FTO and upregulated Methyltransferase like 3 (METTL3 transcription, and these changes were reversed at eight weeks of age. In the tibialis anterior muscle, the maternal high-fat diet significantly enhanced m6A modifications at three weeks, and lowered m6A levels at 15 weeks of age. Accordingly, FTO transcription was significantly inhibited at three weeks and stimulated at 15 weeks of age, and METTL3 transcripts were significantly improved at three weeks. Interestingly, both FTO and METTL3 transcription was significantly elevated at eight weeks of age, and yet the m6A modifications remained unchanged. Our study showed that maternal high-fat intake could affect mRNA m6A modifications and its related genes in offspring in a tissue-specific and development-dependent way, and provided an interesting indication of the working of the m6A system during the transmission from maternal nutrition to subsequent

  2. M5-branes on S 2 × M 4: Nahm's equations and 4d topological sigma-models

    Science.gov (United States)

    Assel, Benjamin; Schäfer-Nameki, Sakura; Wong, Jin-Mann

    2016-09-01

    We study the 6d N = (0 , 2) superconformal field theory, which describes multiple M5-branes, on the product space S 2 × M 4, and suggest a correspondence between a 2d N = (0 , 2) half-twisted gauge theory on S 2 and a topological sigma-model on the four-manifold M 4. To set up this correspondence, we determine in this paper the dimensional reduction of the 6d N = (0 , 2) theory on a two-sphere and derive that the four-dimensional theory is a sigma-model into the moduli space of solutions to Nahm's equations, or equivalently the moduli space of k-centered SU(2) monopoles, where k is the number of M5-branes. We proceed in three steps: we reduce the 6d abelian theory to a 5d Super-Yang-Mills theory on I × M 4, with I an interval, then non-abelianize the 5d theory and finally reduce this to 4d. In the special case, when M 4 is a Hyper-Kähler manifold, we show that the dimensional reduction gives rise to a topological sigma-model based on tri-holomorphic maps. Deriving the theory on a general M 4 requires knowledge of the metric of the target space. For k = 2 the target space is the Atiyah-Hitchin manifold and we twist the theory to obtain a topological sigma-model, which has both scalar fields and self-dual two-forms.

  3. Cloning and expression of a toxin gene from Pseudomonas fluorescens GcM5-1A.

    Science.gov (United States)

    Kong, Lingying; Guo, Daosen; Zhou, Shiyi; Yu, Xinlei; Hou, Guixue; Li, Ronggui; Zhao, Boguang

    2010-07-01

    Pseudomonas fluorescens GcM5-1A was isolated from the pine wood nematode (PWN), Bursaphelenchus xylophilus, obtained from wilted Japanese black pine, Pinus thumbergii, in China. In this paper, a genomic library of the GcM5-1A strain was constructed and a toxin-producing clone was isolated by bioassay. Nucleotide sequence analysis revealed an open reading frame of 1,290 bp encoding a protein of 429 amino acids with N-terminal putative signal peptide of 36 amino acids, which shared a similarity of 83, 82 and 80% identity with hypothetical protein PFLU2919 from P. fluorescens SBW25, Dyp-type peroxidase family protein from P. fluorescens Pf-5 and Tat-translocated enzyme from P. fluorescens Pf0-1, respectively. The gene encoding a full-length protein or without the putative signal peptide was cloned and expressed as a soluble protein in E. coli. The recombinant protein was purified to electrophoretic homogeneity by affinity chromatography using a Ni2+ matrix column. Its relative molecular weight was estimated to be 48.5 kDa by SDS-PAGE for full-length protein, and 45.0 kDa for the recombinant protein without putative signal peptide. Bioassay results showed that the recombinant protein with or without the putative signal peptide was toxic to both suspension cells and P. thunbergii seedlings. HPLC analysis demonstrated that components in branch extracts of P. thunbergii were significantly changed after addition of the recombinant full-length protein and hydrogen peroxide, which indicated that it is probably a peroxidase. This study offers information that can be used to determine the mechanism of pine wilt disease caused by the PWN.

  4. Correlation between the Polymorphism of PepT1 Gene and Feed Conversion Rate in Chongren Spotty Chicken%崇仁麻鸡PepT1基因多态性与饲料转化率的关联分析

    Institute of Scientific and Technical Information of China (English)

    肖金华; 何余湧; 侯冠彧; 谢金防; 武艳平; 陆伟; 刘林秀; 霍俊宏; 季华员; 康昭风; 谢明贵; 唐维国

    2013-01-01

    In this study 60-120 d Chongren spotty chickens were used as the test material and primers were designed according to the sequence of PepT1 gene. Then the single nucleotide polymorphisms of PepT1 gene were detected by PCR direct sequencing and its genotype was analyzed by read-through of DNA sequence along with the identification of its peak chart, which aimed to explore the relationship between PepT1 gene polymorphism and feed conversion rate in Chongren spotty chickens. Three SNP loci were found and they were completely silent mutations. A single base was transformed( G→A) on the 95st spot of exon 4 in PepT1, leading to three genotypes: AA, AB and BB. And another two mutations, which were proved identical, were detected on the 64st spot and the 70st spot of exon 6 of PepT1 gene ( C→G and A→G, respectively) , leading to two genotypes; AA and AB. By analyzing PepT1 gene polymorphism with POPGENE 32 software, PV1 ' s polymorphic locus was moderate and that of PV2 was low, although they were in Hardy - Weinberg equilibrium. Correlation analysis between SNPs genotype of PepT1 gene and feed conversion rate was carried out through SPSS 17.0 and showed that three genotypes in PV1 and two genotypes in PV2 of PepTl. gene were not significantly correlated with feed conversion rate (P>0.05).%试验以60 ~120日龄崇仁麻鸡为试验材料,根据鸡PepT1基因序列设计引物,采用PCR产物直接测序方法检测PepT1基因单核苷酸多态性,并通过对序列碱基的通读以及峰图的鉴定进行基因型分析,探讨PepT1基因多态性与崇仁麻鸡饲料转化率之间的关系.结果共检测到3个SNP位点,且均为沉默突变.其中在PepT1基因外显子4第95处发生了单碱基的改变(G→A),这个突变产生3种基因型(AA,AB和BB),在PepT1基因外显子6第64处和第70处上发现两处突变(分别是由C→G和A→G),且这两处突变具有同一性,这两个突变产生2种基因型(AA,AB).用POPGENE 32软件分析PepT1

  5. Feasibility study of in-situ measurements of Europa's neutral and plasma plumes with JUICE/PEP

    Science.gov (United States)

    Huybrighs, Hans; Futaana, Yoshifumi; Barabash, Stas; Wieser, Martin; Wurz, Peter; Krupp, Norbert; Glassmeier, Karl-Heinz; Vermeersen, Bert

    2016-04-01

    We investigate the spatial distribution of the neutral and plasma particles originating from the Europa plume [1] by simulating their trajectories in order to evaluate their in-situ detection by the PEP (Particle Environment Package) instrument, a part of the JUICE scientific payload. We first produced neutral test particles by assuming source characteristics (temperature and mass flux) of the water plume. Subsequently these particles were traced under Europa's gravity field to obtain the density distribution of the plume gas. Then test particles representing water molecule ions were produced by combining the neutral density distribution and a time constant for electron impact reactions. Subsequently the trajectories of the produced water molecule ions were traced under the Jovian corotational electromagnetic field. Finally, from the calculated neutral density and the plasma velocity distributions, we emulated the observations of the neutrals and ions along the two Europa flybys planned for the JUICE mission. We did this specifically for the PEP/NIM (Neutral gas and Ion Mass Spectrometer) and PEP/JDC (Jovian plasma Dynamics and Composition analyser) sensor. The derived signal to noise ratios are well above the detection limits of NIM and JDC (S/N>100 and >10, respectively), even if we assume a rather low-mass-flux plume (˜0.7 kg/s, which is 104 times less than what was reported in [1]). The flux is significantly asymmetrical between the inbound and outbound trajectory, because the charged particles are flowing downtail (leading hemisphere direction) due to the Jovian co-rotation flow. [1] Roth, L., J. Saur, K. D. Retherford, D. F. Strobel, P. D. Feldman, M. A. McGrath, and F. Nimmo, Transient water vapor at europa's south pole, Science, 343(6167), 171-174, doi:10.1126/science.1247051, 2014.

  6. Changes of biological functions of dipeptide transporter (PepT1)and hormonal regulation in severe scald rats

    Institute of Scientific and Technical Information of China (English)

    Bing-Wei Sun; Xiao-Chen Zhao; Guang-Ji Wang; Ning Li; Jie-Shou Li

    2003-01-01

    AIM: To determine the regulatory effects of recombinant human growth hormone (rhGH) on dipeptide transport (PepT1) in normal and severe scald rats.METHODS: Male Sprague-Dawley rats with 30 % total body surface area (TBSA) Ⅲ degree scald were employed as the model. In this study rhGH was used at the dose of 2 IU.kg-1d-1. An everted sleeve of intestine 4 cm long obtained from mid-jejunum was securely incubated in Kreb's solution with radioactive dipeptide (3H-glycylsarcosine, 3H-Gly-Sar,10 μCi/ml) at 37 ℃ for 15 min to measure the effects of uptake and transport of PepT1 of small intestinal epithelial cells in normal and severe scald rats.RESULTS: Abundant blood supply to intestine and mesentery was observed in normal and scald rats administered rhGH,while less supply of blood to intestine and mesentery was observed in rats without rhGH. Compared with controls, the transport of dipeptide in normal rats with injection of rhGH was not significantly increased (P=0.1926), while the uptake was significantly increased (P=0.0253). The effects of transport and uptake of PepT1 in scald rats with injection of rhGH were significantly increased (P=0.0082, 0.0391).CONCLUSION: Blood supply to intestine and mesentery of rats was increased following injection of rhGH. The effects of uptake and transport of dipeptide transporters in small intestinal epithelial cells of rats with severe scald were markedly up-regulated by rhGH.

  7. Construction of recombinant industrial Saccharomyces cerevisiae strain with bglS gene insertion into PEP4 locus by homologous recombination

    Institute of Scientific and Technical Information of China (English)

    Qiang ZHANG; Qi-he CHEN; Ming-liang FU; Jin-ling WANG; Hong-bo ZHANG; Guo-qing HE

    2008-01-01

    The bglS gene encoding endo-1,3-1,4-β-glucanase from Bacillus subtilis was cloned and sequenced in this study. The bglS expression cassette, including PGK1 promoter, bglS gene fused to the signal sequence of the yeast mating pheromone α-factor (MFals), and ADH1 terminator with G418-resistance as the selected marker, was constructed. Then one of the PEP4 allele of Saccharomyces cerevisiae WZ65 strain was replaced by bglS expression cassette using chromosomal integration of polymerase chain reaction (PCR)-mediated homologous recombination, and the bglS gene was expressed simultaneously. The recombinant strain S. cerevisiae (SC-βG) was preliminarily screened by the clearing hydrolysis zone formed after the barley β-glucan was hydrolyzed in the plate and no proteinase A (PrA) activity was measured in fermenting liquor. The results of PCR analysis ofgenome DNA showed that one of the PEP4 allele had been replaced and bglS gene had been inserted into the locus of PEP4 gene in recombinant strains. Different endo-1,3-1,4-β-glucanase assay methods showed that the recombinant strain SC-βG had high endo-1,3-1,4-β-glucanase expression level with the maximum of 69.3 U/(h-ml) after 60 h of incubation. Meanwhile, the Congo Red method was suitable for the determination of endo-1,3-1,4-β-glucanase activity during the actual brewing process. The current research implies that the constructed yeast strain could be utilized to improve the industrial brewing property of beer.

  8. Evaluation of the immunogenicity and the protective efficacy of a novel identified immunogenic protein, SsPepO, of Streptococcus suis serotype 2.

    Science.gov (United States)

    Li, Jinquan; Xia, Jin; Tan, Chen; Zhou, Yang; Wang, Yan; Zheng, Chengkun; Chen, Huanchun; Bei, Weicheng

    2011-09-02

    Streptococcus suis serotype 2 (S. suis 2) is an important porcine and human pathogen. Some proteins secreted by S. suis 2 are thought to play important roles in the pathogenesis of this organism and in its induced immune response. SsPepO has been previously identified as a secretary immunogenic protein using immunoproteomic techniques. In this study, we confirmed that the sequence of this protein is highly conserved in S. suis 2 and compared it with its homologues in other pathogens. To test the protective efficacy of SsPepO in animal models, the recombinant SsPepO protein was used to immunize mice and pigs. The results demonstrated that it could elicit a strong humoral antibody response and confer significant protection against challenge with a lethal dose of S. suis 2 in mice and pig models. In addition, the antisera against rSsPepO could efficiently inhibit bacterial growth in a whole blood assay and conferred significant protection against S. suis 2 infection in passive immunization experiments. Our findings suggest that SsPepO plays an important role in the pathogenesis of S. suis 2 and would be a promising subunit vaccine candidate. Copyright © 2011 Elsevier Ltd. All rights reserved.

  9. Pyramidal and extrapyramidal scale (PEPS): a new scale for the assessment of motor impairment in vascular cognitive impairment associated with small vessel disease.

    Science.gov (United States)

    Kim, Sook Hui; Seo, Sang Won; Go, Seok Min; Chin, Juhee; Lee, Byung Hwa; Lee, Jae-Hong; Han, Seol-Heui; Na, Duk L

    2011-04-01

    Vascular cognitive impairment associated with small vessel disease (sVCI) may manifest as both cognitive and motor dysfunctions. However, few instruments exist for systematically assessing motor symptoms in sVCI, even though many neuropsychological tests exist to evaluate cognitive function. We developed a new scale for assessing motor impairments and evaluated the reliability and validity of the scale in patients with sVCI. A new motor scale, called the PEPS (Pyramidal and Extra Pyramidal Scale for sVCI), consisted of 34 items (for 60 total points) with 5 subdomains: corticospinal, corticobulbar, extrapyramidal signs, gait abnormalities, and gait severity. The PEPS was compared between 75 patients with sVCI and 73 control patients who had dementia or mild cognitive impairment (MCI) without ischemia. The PEPS had good interrater and test-retest reliability, and it was moderately to highly correlated with the UPDRS, NIHSS, MMSE, CDR, and ADL scales. An optimal cut-off score of PEPS to discriminate dementia or MCI patients with ischemia from those without ischemia was 6.5 with a sensitivity of 88% and a specificity of 100%. The PEPS is a reliable and valid scale that can be used to assess and monitor motor impairment in patients with vascular cognitive impairment due to small vessel disease. Copyright © 2010 Elsevier B.V. All rights reserved.

  10. The effect of fasting and refeeding on mRNA expression of PepT1 and gastrointestinal hormones regulating digestion and food intake in zebrafish (Danio rerio).

    Science.gov (United States)

    Koven, William; Schulte, Patricia

    2012-12-01

    In vertebrates, a significant part of ingested protein is absorbed as di- and tripeptides through a brush border membrane proton/oligopeptide transporter protein called PepT1. The aim of the present study was to determine the effect of short-term food deprivation and refeeding in adult zebrafish (Danio rerio) on gastrointestinal mRNA expression of PepT1 as well as on the satiety hormones cholecystokinin (CCK), gastrin-releasing peptide (GRP) and ghrelin (GHR) in order to elucidate a potential mechanism driving compensatory growth. Sixty adult zebrafish were stocked in a 40-L aquarium and fed daily a commercial flake diet to satiation for 10 days where the digestive tracts (DT) of sampled fish (n = 5) were dissected out. Samplings were repeated following 1, 2 and 5 days of food deprivation and after 1, 2 and 5 days of refeeding. The RNA was extracted from all sampled DTs and analyzed by quantitative real-time PCR for the mRNA expression of PepT1, rRNA 18S, CCK, GRP and GHR. PepT1 mRNA expression increased with successive refeedings reaching a level approximately 8 times higher than pre-fast levels. CCK, GRP and GHR mRNA levels also decreased during fasting, but increased only to pre-fasting levels with refeeding. Overall, the results suggest that PepT1 may be a contributing mechanism to compensatory growth that could influence CCK secretion and GRP and GHR activity.

  11. Influence of the beam-size effect on particle losses at B-factories PEP-II and KEKB

    Energy Technology Data Exchange (ETDEWEB)

    Kotkin, G.L.; Serbo, V.G. E-mail: serbo@math.nsc.ru

    2004-01-21

    In the colliders, the macroscopically large impact parameters give a substantial contribution to the standard cross-section of the e{sup +}e{sup -}{yields}e{sup +}e{sup -}{gamma} process. These impact parameters may be much larger than the transverse sizes of the colliding bunches. It means that the standard cross-section of this process has to be substantially modified. In the present paper such a beam-size is calculated for bremsstrahlung at B-factories PEP-II and KEKB. We find out that this effect reduces beam losses due to bremsstrahlung by about 20%.

  12. First Simultaneous Precision Spectroscopy of $pp$, $^7$Be, and $pep$ Solar Neutrinos with Borexino Phase-II

    OpenAIRE

    Agostini, M.; Altenmuller, K.; Bravo, D.; Wojcik, M.; Wurm, M.; Yokley, Z.; Zaimidoroga, O.; Zavatarelli, S.; Zuber, K.; Zuzel, G.; Caccianiga, B.; Calaprice, F.; Caminata, A.; Caprioli, S; Carlini, M.

    2017-01-01

    We present the first simultaneous measurement of the interaction rates of $pp$, $^7$Be, and $pep$ solar neutrinos performed with a global fit to the Borexino data in an extended energy range (0.19-2.93)$\\,$MeV. This result was obtained by analyzing 1291.51$\\,$days of Borexino Phase-II data, collected between December 2011 and May 2016 after an extensive scintillator purification campaign. We find: rate($pp$)$\\,$=$\\,$$134$$\\,$$\\pm$$\\,$$10$$\\,$($stat$)$\\,$$^{\\rm +6}_{\\rm -10}$$\\,$($sys$)$\\,$cpd...

  13. Sources of amplitude-dependent tune shift in the PEP-2 design and their compensation with octupoles

    Science.gov (United States)

    Forest, E.; Robin, D.; Zholents, A.; Donald, M.; Helm, R.; Irwin, J.; Moshammer, H.

    1994-06-01

    Higher order contributions from sextupoles and dipole fringe fields, quadrupole fringe fields, kinematic terms in the Hamiltonian, and systematic or random multipole errors may degrade the dynamic aperture by shifting the particles in the tune plane in an undesired direction. The authors compare the various sources quantitatively and discuss their impact on the dynamic aperture of the PEP-2 low energy ring (LER) lattice. A tunable compensation scheme for the LER lattice which permits an independent control of the tune shift with amplitude in the two transverse planes is presented.

  14. Application of Subspace Detection to the 6 November 2011 M5.6 Prague, Oklahoma Aftershock Sequence

    Science.gov (United States)

    McMahon, N. D.; Benz, H.; Johnson, C. E.; Aster, R. C.; McNamara, D. E.

    2015-12-01

    Subspace detection is a powerful tool for the identification of small seismic events. Subspace detectors improve upon single-event matched filtering techniques by using multiple orthogonal waveform templates whose linear combinations characterize a range of observed signals from previously identified earthquakes. Subspace detectors running on multiple stations can significantly increasing the number of locatable events, lowering the catalog's magnitude of completeness and thus providing extraordinary detail on the kinematics of the aftershock process. The 6 November 2011 M5.6 earthquake near Prague, Oklahoma is the largest earthquake instrumentally recorded in Oklahoma history and the largest earthquake resultant from deep wastewater injection. A M4.8 foreshock on 5 November 2011 and the M5.6 mainshock triggered tens of thousands of detectable aftershocks along a 20 km splay of the Wilzetta Fault Zone known as the Meeker-Prague fault. In response to this unprecedented earthquake, 21 temporary seismic stations were deployed surrounding the seismic activity. We utilized a catalog of 767 previously located aftershocks to construct subspace detectors for the 21 temporary and 10 closest permanent seismic stations. Subspace detection identified more than 500,000 new arrival-time observations, which associated into more than 20,000 locatable earthquakes. The associated earthquakes were relocated using the Bayesloc multiple-event locator, resulting in ~7,000 earthquakes with hypocentral uncertainties of less than 500 m. The relocated seismicity provides unique insight into the spatio-temporal evolution of the aftershock sequence along the Wilzetta Fault Zone and its associated structures. We find that the crystalline basement and overlying sedimentary Arbuckle formation accommodate the majority of aftershocks. While we observe aftershocks along the entire 20 km length of the Meeker-Prague fault, the vast majority of earthquakes were confined to a 9 km wide by 9 km deep

  15. Streak-Camera Measurements with High Currents in PEP-II and Variable Optics in SPEAR3

    Energy Technology Data Exchange (ETDEWEB)

    Cheng, Weixeng; Fisher, Alan, a Corbett, Jeff; /SLAC

    2008-06-05

    A dual-axis, synchroscan streak camera was used to measure longitudinal bunch profiles in three storage rings at SLAC: the PEP-II low- and high-energy rings, and SPEAR3. At high currents, both PEP rings exhibit a transient synchronous-phase shift along the bunch train due to RF-cavity beam loading. Bunch length and profile asymmetry were measured along the train for a range of beam currents. To avoid the noise inherent in a dual-axis sweep, we accumulated single-axis synchroscan images while applying a 50-ns gate to the microchannel plate. To improve the extinction ratio, an upstream mirror pivoting at 1 kHz was synchronized with the 2kHz MCP gate to deflect light from other bunches off the photocathode. Bunch length was also measured on the HER as a function of beam energy. For SPEAR3 we measured bunch length as a function of single-bunch current for several lattices: achromatic, low-emittance and low momentum compaction. In the first two cases, resistive and reactive impedance components can be extracted from the longitudinal bunch profiles. In the low-alpha configurations, we observed natural bunch lengths approaching the camera resolution, requiring special care to remove instrumental effects, and saw evidence of periodic bursting.

  16. Q8IYL2 is a candidate gene for the familial epilepsy syndrome of Partial Epilepsy with Pericentral Spikes (PEPS).

    Science.gov (United States)

    Leschziner, Guy D; Coffey, Alison J; Andrew, Toby; Gregorio, Sheila P; Dias-Neto, Emmanuel; Calafato, Maria; Bentley, David R; Kinton, Lucy; Sander, Josemir W; Johnson, Michael R

    2011-09-01

    Partial Epilepsy with Pericentral Spikes (PEPS) is a novel Mendelian idiopathic epilepsy with evidence of linkage to Chromosome 4p15. Our aim was to identify the causative mutation in this epilepsy syndrome. We re-annotated all 42 genes in the linked chromosomal region and sequenced all genes within the linked interval. All exons, intron-exon boundaries and untranslated regions were sequenced in the original pedigree, and novel changes segregating correctly were subjected to bioinformatic analysis. Quantitative polymerase chain reaction was performed to examine for potential copy number variation (CNV). 29 previously undescribed variants correctly segregating with the linked haplotype were identified. Bioinformatic analysis demonstrated that six variants were non-synonymous coding sequence polymorphisms, one of which, in Q8IYL2 (Gly400Ala), was found in neither Caucasian (n=243) and ancestry-matched Brazilian (n=180) control samples, nor subjects from the 1000 Genome Project. No gene duplications or deletions were identified in the linked region. We postulate that Q8IYL2 is a causative gene for PEPS, after exhaustive resequencing and bioinformatic analysis. The function of this gene is unknown, but it is expressed in brain tissue. Copyright © 2011 Elsevier B.V. All rights reserved.

  17. miR-378 Activates the Pyruvate-PEP Futile Cycle and Enhances Lipolysis to Ameliorate Obesity in Mice.

    Science.gov (United States)

    Zhang, Yong; Li, Changyin; Li, Hu; Song, Yipeng; Zhao, Yixia; Zhai, Lili; Wang, Haixia; Zhong, Ran; Tang, Huiru; Zhu, Dahai

    2016-03-01

    Obesity has been linked to many health problems, such as diabetes. However, there is no drug that effectively treats obesity. Here, we reveal that miR-378 transgenic mice display reduced fat mass, enhanced lipolysis, and increased energy expenditure. Notably, administering AgomiR-378 prevents and ameliorates obesity in mice. We also found that the energy deficiency seen in miR-378 transgenic mice was due to impaired glucose metabolism. This impairment was caused by an activated pyruvate-PEP futile cycle via the miR-378-Akt1-FoxO1-PEPCK pathway in skeletal muscle and enhanced lipolysis in adipose tissues mediated by miR-378-SCD1. Our findings demonstrate that activating the pyruvate-PEP futile cycle in skeletal muscle is the primary cause of elevated lipolysis in adipose tissues of miR-378 transgenic mice, and it helps orchestrate the crosstalk between muscle and fat to control energy homeostasis in mice. Thus, miR-378 may serve as a promising agent for preventing and treating obesity in humans.

  18. Secondary Electron Yield Measurements and Groove Chambers Tests in the PEP-II Beam Line Straights Sections

    Energy Technology Data Exchange (ETDEWEB)

    Pivi, M.T.F.; King, F.; Kirby, R.E.; Markiewicz, T; Raubenheimer, T.O.; Seeman, J.; Wang, L.; /SLAC

    2008-07-03

    Beam instability caused by the electron cloud has been observed in positron and proton storage rings and it is expected to be a limiting factor in the performance of the positron Damping Ring (DR) of future Linear Colliders such as ILC and CLIC [1, 2]. In the Positron Low Energy Ring (LER) of the PEP-II accelerator, we have installed vacuum chambers with rectangular grooves in a straight magnetic-free section to test this promising possible electron cloud mitigation technique. We have also installed a special chamber to monitor the secondary electron yield of TiN and TiZrV (NEG) coating, Copper, Stainless Steel and Aluminum under the effect of electron and photon conditioning in situ in the beam line. In this paper, we describe the ongoing R&D effort to mitigate the electron cloud effect for the ILC damping ring, the latest results on in situ secondary electron yield conditioning and recent update on the groove tests in PEP-II.

  19. miR-378 Activates the Pyruvate-PEP Futile Cycle and Enhances Lipolysis to Ameliorate Obesity in Mice

    Directory of Open Access Journals (Sweden)

    Yong Zhang

    2016-03-01

    Full Text Available Obesity has been linked to many health problems, such as diabetes. However, there is no drug that effectively treats obesity. Here, we reveal that miR-378 transgenic mice display reduced fat mass, enhanced lipolysis, and increased energy expenditure. Notably, administering AgomiR-378 prevents and ameliorates obesity in mice. We also found that the energy deficiency seen in miR-378 transgenic mice was due to impaired glucose metabolism. This impairment was caused by an activated pyruvate-PEP futile cycle via the miR-378-Akt1-FoxO1-PEPCK pathway in skeletal muscle and enhanced lipolysis in adipose tissues mediated by miR-378-SCD1. Our findings demonstrate that activating the pyruvate-PEP futile cycle in skeletal muscle is the primary cause of elevated lipolysis in adipose tissues of miR-378 transgenic mice, and it helps orchestrate the crosstalk between muscle and fat to control energy homeostasis in mice. Thus, miR-378 may serve as a promising agent for preventing and treating obesity in humans.

  20. Site-directed mutation of arginine 282 to glutamate uncouples the movement of peptides and protons by the rabbit proton-peptide cotransporter PepT1.

    Science.gov (United States)

    Meredith, David

    2004-04-16

    A conserved positive residue in the seventh transmembrane domain of the mammalian proton-coupled di- and tripeptide transporter PepT1 has been shown by site-directed mutagenesis to be a key residue for protein function. Substitution of arginine 282 with a glutamate residue (R282E-PepT1) gave a protein at the plasma membrane of Xenopus laevis oocytes that was able to transport the non-hydrolyzable dipeptide [3H]d-Phe-l-Gln, although unlike the wild type, the rate of transport by R282E-PepT1 was independent of the extracellular pH level, and the substrate could not be accumulated above equilibrium. The binding affinity of the mutant transport protein was unchanged from the wild type. Thus, R282E-Pept1 appears to have been changed from a proton-driven to a facilitated transporter for peptides. In addition, peptide transport by R282E-PepT1 still induced depolarization as measured by microelectrode recordings of membrane potential. A more detailed study by two-electrode voltage clamping revealed that R282E-PepT1 behaved as a peptide-gated non-selective cation channel with the ion selectivity series lithium > sodium > N-methyl-d-glucamine at pH 7.4. There was also a proton conductance (comparing pH 7.4 and 8.4), and at pH 5.5 the predominant conductance was for potassium ions. Therefore, it can be concluded that changing arginine 282 to a glutamate not only uncouples the cotransport of protons and peptides of the wild-type PepT1 but also creates a peptide-gated cation channel in the protein.

  1. Probing M subdwarf metallicity with an esdK5+esdM5.5 binary

    CERN Document Server

    Pavlenko, Ya V; Gálvez-Ortiz, M C; Kushniruk, I O; Jones, H R A

    2015-01-01

    We present a spectral analysis of the binary G 224-58 AB that consists of the coolest M extreme subdwarf (esdM5.5) and a brighter primary (esdK5). This binary may serve as a benchmark for metallicity measurement calibrations and as a test-bed for atmospheric and evolutionary models for esdM objects. We determine abundances primarily using high resolution optical spectra of the primary. Other parameters were determined from the fits of synthetic spectra computed with these abundances to the observed spectra from 0.4 to 2.5 microns for both components. We determine \\Tef =4625 $\\pm$ 100 K, \\logg = 4.5 $\\pm$ 0.5 for the A component and \\Tef = 3200 $\\pm$ 100 K, \\logg = 5.0 $\\pm$ 0.5, for the B component. We obtained abundances of [Mg/H]=$-$1.51$\\pm$0.08, [Ca/H]=$-$1.39$\\pm$0.03, [Ti/H]=$-$1.37$\\pm$0.03 for alpha group elements and [CrH]=$-$1.88$\\pm$0.07, [Mn/H]=$-$1.96$\\pm$0.06, [Fe/H]=$-$1.92$\\pm$0.02, [Ni/H]=$-$1.81$\\pm$0.05 and [Ba/H]W=$-$1.87$\\pm$0.11 for iron group elements from fits to the spectral lines obs...

  2. Heavy ion irradiation induced dislocation loops in AREVA's M5 Registered-Sign alloy

    Energy Technology Data Exchange (ETDEWEB)

    Hengstler-Eger, R.M., E-mail: Rosmarie.Hengstler-Eger@areva.com [AREVA, AREVA NP GmbH, Paul-Gossen-Str. 100, 91052 Erlangen (Germany); Baldo, P. [Argonne National Laboratory, Materials Science Division, 9700 South Cass Avenue, 60439 Argonne IL (United States); Beck, L. [Maier-Leibnitz-Laboratorium (MLL), Am Coulombwall 6, 85748 Garching (Germany); Dorner, J.; Ertl, K. [Max-Planck-Institut fuer Plasmaphysik, Boltzmannstr. 2, 85748 Garching (Germany); Hoffmann, P.B. [AREVA, AREVA NP GmbH, Paul-Gossen-Str. 100, 91052 Erlangen (Germany); Hugenschmidt, C. [Forschungsneutronenquelle Heinz Maier-Leibnitz (FRM II), Lichtenbergstr. 1, 85747 Garching (Germany); Kirk, M.A. [Argonne National Laboratory, Materials Science Division, 9700 South Cass Avenue, 60439 Argonne IL (United States); Petry, W.; Pikart, P. [Forschungsneutronenquelle Heinz Maier-Leibnitz (FRM II), Lichtenbergstr. 1, 85747 Garching (Germany); Rempel, A. [AREVA, AREVA NP GmbH, Paul-Gossen-Str. 100, 91052 Erlangen (Germany)

    2012-04-15

    Pressurized water reactor (PWR) Zr-based alloy structural materials show creep and growth under neutron irradiation as a consequence of the irradiation induced microstructural changes in the alloy. A better scientific understanding of these microstructural processes can improve simulation programs for structural component deformation and simplify the development of advanced deformation resistant alloys. As in-pile irradiation leads to high material activation and requires long irradiation times, the objective of this work was to study whether ion irradiation is an applicable method to simulate typical PWR neutron damage in Zr-based alloys, with AREVA's M5 Registered-Sign alloy as reference material. The irradiated specimens were studied by electron backscatter diffraction (EBSD), positron Doppler broadening spectroscopy (DBS) and in situ transmission electron microscopy (TEM) at different dose levels and temperatures. The irradiation induced microstructure consisted of - and -type dislocation loops with their characteristics corresponding to typical neutron damage in Zr-based alloys; it can thus be concluded that heavy ion irradiation under the chosen conditions is an excellent method to simulate PWR neutron damage.

  3. Potential role of transient receptor potential channel M5 in sensing putative pheromones in mouse olfactory sensory neurons.

    Science.gov (United States)

    Oshimoto, Arisa; Wakabayashi, Yoshihiro; Garske, Anna; Lopez, Roberto; Rolen, Shane; Flowers, Michael; Arevalo, Nicole; Restrepo, Diego

    2013-01-01

    Based on pharmacological studies of chemosensory transduction in transient receptor potential channel M5 (TRPM5) knockout mice it was hypothesized that this channel is involved in transduction for a subset of putative pheromones in mouse olfactory sensory neurons (OSNs). Yet, in the same study an electroolfactogram (EOG) in the mouse olfactory epithelium showed no significant difference in the responses to pheromones (and odors) between wild type and TRPM5 knockout mice. Here we show that the number of OSNs expressing TRPM5 is increased by unilateral naris occlusion. Importantly, EOG experiments show that mice lacking TRPM5 show a decreased response in the occluded epithelia to putative pheromones as opposed to wild type mice that show no change upon unilateral naris occlusion. This evidence indicates that under decreased olfactory sensory input TRPM5 plays a role in mediating putative pheromone transduction. Furthermore, we demonstrate that cyclic nucleotide gated channel A2 knockout (CNGA2-KO) mice that show substantially decreased or absent responses to odors and pheromones also have elevated levels of TRPM5 compared to wild type mice. Taken together, our evidence suggests that TRPM5 plays a role in mediating transduction for putative pheromones under conditions of reduced chemosensory input.

  4. Reaction in air and in nitrogen of pre-oxidised Zircaloy-4 and M5™ claddings

    Energy Technology Data Exchange (ETDEWEB)

    Duriez, C., E-mail: christian.duriez@irsn.fr [Institut de Radioprotection et de Sûreté Nucléaire (IRSN), PSN-RES/SEREX-LE2M, Centre de Cadarache, St Paul-Lez-Durance 13115 (France); Drouan, D. [Institut de Radioprotection et de Sûreté Nucléaire (IRSN), PSN-RES/SEREX-LE2M, Centre de Cadarache, St Paul-Lez-Durance 13115 (France); Pouzadoux, G. [Université Technologique de Troyes, BP 2060, Troyes 10010 (France)

    2013-10-15

    High temperature reactivity in air and in nitrogen of pre-oxidised Zircaloy-4 and M5™ claddings has been studied by thermogravimetry. Claddings were pre-oxidised at low temperature with the aim of simulating spent fuel. Different pre-oxidation modes, inducing significant variation in the pre-oxides microstructure, were compared. The behaviour in air, investigated in the 850–1000 °C temperature range, was found to be strongly dependant on the type of pre-oxide: the compact pre-oxide formed in autoclave (at temperature, pressure, and water chemistry representative of PWR conditions) significantly slows down the degradation in air compared to the bare alloys; on the contrary, a pre-oxide formed at 500 °C at ambient pressure, either in oxygen or in steam, favours the initiation of post-breakaway type oxidation, which in air is associated with nitride formation. The behaviour in nitrogen has been investigated in the 800–1200 °C temperature range, with Zircaloy-4 pre-oxidised at 500 °C in O{sub 2}. Reactivity is low up to 1000 °C but becomes very significant at the highest temperatures investigated, 1100 and 1200 °C. Finally, cladding segments first reacted in N{sub 2} at 1100 °C, were exposed to air and show fast oxidation even at the lowest temperature investigated (600 °C)

  5. Absolute Magnitudes and Colors of RR Lyrae Stars in DECam Passbands from Photometry of the Globular Cluster M5

    Science.gov (United States)

    Vivas, A. Katherina; Saha, Abhijit; Olsen, Knut; Blum, Robert; Olszewski, Edward W.; Claver, Jennifer; Valdes, Francisco; Axelrod, Tim; Kaleida, Catherine; Kunder, Andrea; Narayan, Gautham; Matheson, Thomas; Walker, Alistair

    2017-09-01

    We characterize the absolute magnitudes and colors of RR Lyrae stars in the globular cluster M5 in the ugriz filter system of the Dark Energy Camera (DECam). We provide empirical period-luminosity (P-L) relationships in all five bands based on 47 RR Lyrae stars of the type ab and 14 stars of the type c. The P-L relationships were found to be better constrained for the fundamental-mode RR Lyrae stars in the riz passbands, with dispersions of 0.03, 0.02 and 0.02 mag, respectively. The dispersion of the color at minimum light was found to be small, supporting the use of this parameter as a means to obtain accurate interstellar extinctions along the line of sight up to the distance of the RR Lyrae star. We found a trend of color at minimum light with a pulsational period that, if taken into account, brings the dispersion in color at minimum light to ≤slant 0.016 mag for the (r-i), (i-z), and (r-z) colors. These calibrations will be very useful for using RR Lyrae stars from DECam observations as both standard candles for distance determinations and color standards for reddening measurements.

  6. Proliferation response of peripheral blood mononuclear cells to streptococcus M6 protein in patients with psoriasis%银屑病患者外周血单一核细胞对链球菌M6蛋白的反应

    Institute of Scientific and Technical Information of China (English)

    刘雯; 赵广; 刘玉峰

    2003-01-01

    目的: 探讨链球菌M6蛋白(M6P)在点滴型银屑病发病中的作用机制. 方法: MTT法检测点滴型银屑病(GP)、斑块型银屑病(PP)患者及正常人外周血单一核细胞(PBMC)对极微量(100 ng)M6P、葡萄球菌肠毒素B(staphylococcal endotoxin B, SEB)的增殖反应;双抗夹心ELISA法检测M6P刺激培养72 h点滴型银屑病PBMC上清中IFN-γ,IL-4水平. 结果: M6P可引起点滴型银屑病患者PBMC明显的增殖反应,与RPMI 1640组(空白对照)差异非常显著(P<0.01);与斑块型组及正常对照组相比差异极显著(P<0.01);点滴型银屑病组M6P刺激72 h培养上清中IFN-γ含量较空白对照组明显升高(P<0.01),IL-4含量均未检出. 结论: 在点滴型银屑病的发病中,M6P可能作为细菌超抗原刺激T细胞大量增殖后释放Th1型细胞因子而起作用.

  7. Functional expression of oligopeptide transporter PepT1 in the gastrointestinal tract and its regulatory factors%寡肽转运体PepT1在胃肠道中的功能表达及调控因素

    Institute of Scientific and Technical Information of China (English)

    陈红旗; 秦环龙

    2010-01-01

    Many peptide transporters have been identified in mammals, among which PepT1 has been widely studied. PepT1, a member of proton-coupled oligopeptide transporter (POT) superfamily, is a peptide transporter of low affinity and high capacity and is mainly expressed in the brush border membrane of intestinal epithelial cells. PepT1 plays an important role in the absorption of di/tri-peptide (the degradation products of protein in intestinal tract). Meanwhile, it mediates the transport of peptide-like drugs and the bacterial products. Therefore,the changes of the functional expression of PepT1 in the gastrointestinal tract may dramatically affect the internal and external environmental stability and drug absorption. This paper reviews the structural features and function,distribution, transport mechanisms, and regulatory factors of PepT1.%目前在哺乳动物体内已发现多种肽转运载体,其中研究最为广泛的是PepT1.PepT1属于典型的依质子的寡肽转运体(POT)超家族成员,是一种H+依赖的、低亲和力/高容量寡肽转运体,主要表达在小肠上皮细胞刷状缘膜上.肠道PepT1除对消化道中蛋白质降解产物二肽、三肽具有转运吸收功能外,肽类似药物和部分细菌产物均可经该载体转运吸收;因此,PepT1在胃肠道中的功能表达变化,对于维持内外环境稳定及药物吸收具有重要的病理生理学意义.本文总结了PepT1的结构特征和功能、分布、转运机制及调控因素,初步探讨了需要进一步深入研究的问题.

  8. 图K(5m,5)的自同态的自同态谱%On the Andomorphism Spectrum of K(5m,5)

    Institute of Scientific and Technical Information of China (English)

    余鋆

    2012-01-01

    In this paper, we obtain that Aut(K(5m, 5)) ≈D5m,sEnd(k(5m, 5))=Aut(k(5m, 5) and End(K(5m,5)) =qEnd(K(5m, 5)), where Ds. is the dihedral group of order 5m. Furthermore, we solve some enumerative problems of End(K(5m, 5)), and give the endomorphism spectrum of k(5m, 5).%从循环完全图K(5m,5)的结构出发,得到Aut(K(5m,5))≈D5m,其中D5m是5m阶的二面体群,sEnd(k(5m,5))=Aut(k(5m,5),End(K(5m,5))=qEnd(K(5m,5))。同时也解决了End(K(5m,5))的一些记数问题,给出了此类图的自同态谱。

  9. Transcriptome-wide mapping of 5-methylcytidine RNA modifications in bacteria, archaea, and yeast reveals m5C within archaeal mRNAs.

    Directory of Open Access Journals (Sweden)

    Sarit Edelheit

    2013-06-01

    Full Text Available The presence of 5-methylcytidine (m(5C in tRNA and rRNA molecules of a wide variety of organisms was first observed more than 40 years ago. However, detection of this modification was limited to specific, abundant, RNA species, due to the usage of low-throughput methods. To obtain a high resolution, systematic, and comprehensive transcriptome-wide overview of m(5C across the three domains of life, we used bisulfite treatment on total RNA from both gram positive (B. subtilis and gram negative (E. coli bacteria, an archaeon (S. solfataricus and a eukaryote (S. cerevisiae, followed by massively parallel sequencing. We were able to recover most previously documented m(5C sites on rRNA in the four organisms, and identified several novel sites in yeast and archaeal rRNAs. Our analyses also allowed quantification of methylated m(5C positions in 64 tRNAs in yeast and archaea, revealing stoichiometric differences between the methylation patterns of these organisms. Molecules of tRNAs in which m(5C was absent were also discovered. Intriguingly, we detected m(5C sites within archaeal mRNAs, and identified a consensus motif of AUCGANGU that directs methylation in S. solfataricus. Our results, which were validated using m(5C-specific RNA immunoprecipitation, provide the first evidence for mRNA modifications in archaea, suggesting that this mode of post-transcriptional regulation extends beyond the eukaryotic domain.

  10. Geochemical evolution of groundwaterof the Iblean Foreland (Southeastern Sicily after the December 13, 1990 earthquake (M = 5.4

    Directory of Open Access Journals (Sweden)

    S. Tersigni

    1995-06-01

    Full Text Available Geochemical surveys were performed by the Istituto Nazionale di Geofisica (ING, between December 1990 and July 1991, in the framework of an interdisciplinary task study throughout the Siracusa epicentral area: these studies were aimed at col1ecting specific information on the geochemical patterns of fluids, in relation to the geodynamic and seismic evolution of the nol1hern Iblean Foreland area, stal1ing from the December, 13, 1990 Syracuse earthquake (M = 5,4. The results of the hydrogeochemical surveys, discussed in this paper, were in part unexpected. In particular, a steady decrease of the PCO2 va1ues, after the eal1hquake, in ground- waters of the epicentral area, along a NNW-SSE fault bordering the Augusta Graben (Brucoli Sulphureous Spring, was observed. This observation enabled us to reconstruct the geochemical processes triggered by the earthquake: a sudden and strong release of CO2 of deep origin, probably related to a pore pressure uprising and/or to a water/rock interaction changes in the vicinity of the seismogenic structure. The existence of deep- fluid uprising (CO2, 222Rn, NHj, H2S, as well as the variation in time of geochemica1 flows accompanying seismic activity along this NNW-SSE anomalous-sites 1ine, within the whole Iblean Foreland, witnes., the activity (as concern as fluidodynamic and geochemistry of the NNW-SSE striking Ibleo-Maltese Escarpment fault system. This fact can be taken into account in locating the seismogenic structure responsible for the 1990 earthquake, like a contribution of the geochemical methods applied to seismotectonics. During June 1992, a more complete ana1ysis of the Iblean Foreland groundwaters was performed, co1lecting data on the geochemi- ca1 feature, of the different aquifers in aseismic period. Mu1tivariable statistics, chemical equilibria studies and mapping with our geochemical data, were also performed.

  11. Low-energy solar neutrino spectroscopy with Borexino. Towards the detection of the solar pep and CNO neutrino flux

    Energy Technology Data Exchange (ETDEWEB)

    Maneschg, Werner

    2011-05-11

    Borexino is a large-volume organic liquid scintillator detector of unprecedented high radiopurity which has been designed for low-energy neutrino spectroscopy in real time. Besides the main objective of the experiment, the measurement of the solar {sup 7}Be neutrino flux, Borexino also aims at detecting solar neutrinos from the pep fusion process and from the CNO cycle. The detectability of these neutrinos is strictly connected to a successful rejection of all relevant background components. The identification and reduction of these background signals is the central subject of this dissertation. In the first part, contaminants induced by cosmic-ray muons and muon showers were analyzed. The dominant background is the cosmogenic radioisotope {sup 11}C. Its rate is {proportional_to}10 times higher than the expected combined pep and CNO neutrino rate in the preferred energy window of observation at [0.8,1.3] MeV. Since {sup 11}C is mostly produced under the release of a free neutron, {sup 11}C can be tagged with a threefold coincidence (TFC) consisting of the muon signal, the neutron capture and the subsequent {sup 11}C decay. By optimizing the TFC method and other rejection techniques, a {sup 11}C rejection efficiency of 80% was achieved. This led to a neutrino-to-background ratio of 1:1.7, whereby 61% of statistics is lost. The second part of the work concerns the study of the external background. Especially long-range 2.6 MeV gamma rays from {sup 208}Tl decays in the outer detector parts can reach the scintillator in the innermost region of the detector. For the determination of the resultant spectral shape, a custom-made {proportional_to}5 MBq {sup 228}Th source was produced and an external calibration was carried out for the first time. The obtained calibration data and the achieved {sup 11}C rejection efficiency will allow for the direct detection of solar pep and possibly also CNO neutrinos with Borexino. (orig.)

  12. 设施蔬菜生防用枯草芽孢杆菌M6发酵条件的优化研究%Optimization of fermentation conditions for Bacillus subtilis M6 on the biological control of protected vegetable

    Institute of Scientific and Technical Information of China (English)

    徐升运; 赵文娟; 马齐; 张强; 任平; 秦涛

    2012-01-01

    The article studied the fermentation technology and optimized the fermentation medium for the Bacillus subtilis M6 on the protected vegetable by single factor experiments and orthogonal experiments. The results showed that the optimum condition of the Bacillus subtilis M6 were corn-starch 10g/L, soy protein powder 8g/L, NaCl 5g/L, K2HPO4 0.6g/L, initial pH value of the medium 7.0, temperature 35℃. inoculation volume 8%, rotation speed 180r/min, fermentation time 42h. Under the optimized conditions, the microbe number of the bacillus subtilis M6 could reach 95.8 × 108cfu/ml in the fermentation liquid and the spore ratio was over 92%. The microbe number of the Bacillus subtilis M6 was increased by 12.7% compared to that (85×108cfu/ml) before the optimization.%研究了设施蔬菜生防用枯草芽孢杆菌M6的发酵工艺,通过单因素试验和正交试验确定了M6的发酵培养基及条件.结果表明,枯草芽孢杆菌M6的的最优化工艺条件:玉米淀粉10g/L、大豆蛋白粉8g/L、NaCl 5g/L、K2HPO40.6g/L、培养基初始pH值7.0、培养温度35℃、接种量8%、摇床转速180r/min、培养时间42h.在此条件下发酵液活菌数达到95.8×108cfu/mL,芽孢形成率达到92%以上.此发酵条件比优化前枯草芽孢杆菌M6活菌数(85× 108cfu/mL)提高了12.7%.

  13. Predicted liquefaction in the greater Oakland area and northern Santa Clara Valley during a repeat of the 1868 Hayward Fault (M6.7-7.0) earthquake

    Science.gov (United States)

    Holzer, Thomas L.; Noce, Thomas E.; Bennett, Michael J.

    2010-01-01

    Probabilities of surface manifestations of liquefaction due to a repeat of the 1868 (M6.7-7.0) earthquake on the southern segment of the Hayward Fault were calculated for two areas along the margin of San Francisco Bay, California: greater Oakland and the northern Santa Clara Valley. Liquefaction is predicted to be more common in the greater Oakland area than in the northern Santa Clara Valley owing to the presence of 57 km2 of susceptible sandy artificial fill. Most of the fills were placed into San Francisco Bay during the first half of the 20th century to build military bases, port facilities, and shoreline communities like Alameda and Bay Farm Island. Probabilities of liquefaction in the area underlain by this sandy artificial fill range from 0.2 to ~0.5 for a M7.0 earthquake, and decrease to 0.1 to ~0.4 for a M6.7 earthquake. In the greater Oakland area, liquefaction probabilities generally are less than 0.05 for Holocene alluvial fan deposits, which underlie most of the remaining flat-lying urban area. In the northern Santa Clara Valley for a M7.0 earthquake on the Hayward Fault and an assumed water-table depth of 1.5 m (the historically shallowest water level), liquefaction probabilities range from 0.1 to 0.2 along Coyote and Guadalupe Creeks, but are less than 0.05 elsewhere. For a M6.7 earthquake, probabilities are greater than 0.1 along Coyote Creek but decrease along Guadalupe Creek to less than 0.1. Areas with high probabilities in the Santa Clara Valley are underlain by young Holocene levee deposits along major drainages where liquefaction and lateral spreading occurred during large earthquakes in 1868 and 1906.

  14. The Prevention Program for Externalizing Problem Behavior (PEP) Improves Child Behavior by Reducing Negative Parenting: Analysis of Mediating Processes in a Randomized Controlled Trial

    Science.gov (United States)

    Hanisch, Charlotte; Hautmann, Christopher; Plück, Julia; Eichelberger, Ilka; Döpfner, Manfred

    2014-01-01

    Background: Our indicated Prevention program for preschool children with Externalizing Problem behavior (PEP) demonstrated improved parenting and child problem behavior in a randomized controlled efficacy trial and in a study with an effectiveness design. The aim of the present analysis of data from the randomized controlled trial was to identify…

  15. Dipeptide model prodrugs for the intestinal oligopeptide transporter. Affinity for and transport via hPepT1 in the human intestinal Caco-2 cell line

    DEFF Research Database (Denmark)

    Nielsen, C U; Andersen, R; Brodin, Birger

    2001-01-01

    The human intestinal di/tri-peptide carrier, hPepT1, has been suggested as a drug delivery target via increasing the intestinal transport of low permeability compounds by designing peptidomimetic prodrugs. Model ester prodrugs using the stabilized dipeptides D-Glu-Ala and D-Asp-Ala as pro......-moieties for benzyl alcohol have been shown to maintain affinity for hPepT1. The primary aim of the present study was to investigate if modifications of the benzyl alcohol model drug influence the corresponding D-Glu-Ala and D-Asp-Ala model prodrugs' affinity for hPepT1 in Caco-2 cells. A second aim...... was to investigate the transepithelial transport and hydrolysis parameters for D-Asp(BnO)-Ala and D-Glu(BnO)-Ala across Caco-2 cell monolayers. In the present study, all investigated D-Asp-Ala and D-Glu-Ala model prodrugs retained various degrees of affinity for hPepT1 in Caco-2 cells. These affinities are used...

  16. Self-diffusion investigations on a series of PEP-PDMS diblock copolymers with different morphologies by pulsed field gradient NMR

    DEFF Research Database (Denmark)

    Rittig, F.; Karger, J.; Papadakis, C.M.

    1999-01-01

    We report on temperature-dependent self-diffusion measurements of compositionally different and non-entangled poly(ethylene-co-propylene)-b-poly(dimethylsiloxane) PEP-PDMS diblock copolymers in the melt above and below the order-to-disorder transition temperature. Depending on the dimensionality ...

  17. Characterisation of the stbD/E toxin-antitoxin system of pEP36, a plasmid of the plant pathogen Erwinia pyrifoliae.

    Science.gov (United States)

    Unterholzner, Simon J; Hailer, Barbara; Poppenberger, Brigitte; Rozhon, Wilfried

    2013-09-01

    pEP36 is a plasmid ubiquitously present in Erwinia pyrifoliae, a pathogen which causes black stem blight of Asian pear. pEP36 is highly stable in its host, even in the absence of selective pressure. The plasmid is closely related to pEA29, which is widespread in E. amylovora, the causative agent of fire blight of apple and pear trees. Here we report that pEP36 possesses a functional hybrid toxin-antitoxin module, stbD/E(pEP36), with the toxin showing homology to the RelE/ParE proteins and the antidote belonging to the Phd/YefM antitoxin family. Bacteria expressing the StbE(pEP36) toxin arrest cell growth and enter a viable but non-culturable stage. However, they maintain their typical cell length and do not show filamentation. Pulse-chase experiments revealed that StbE(pEP36) acts as a global inhibitor of protein synthesis while it does not interfere with DNA and RNA synthesis. The StbD(pEP36) antitoxin is capable of neutralising StbE(pEP36) toxicity. Additional experiments show that the stbD/E(pEP36) module can stabilise plasmids at least 20-fold. Thus the toxin-antitoxin system may contribute to the remarkable stability of pEP36.

  18. The Prevention Program for Externalizing Problem Behavior (PEP) Improves Child Behavior by Reducing Negative Parenting: Analysis of Mediating Processes in a Randomized Controlled Trial

    Science.gov (United States)

    Hanisch, Charlotte; Hautmann, Christopher; Plück, Julia; Eichelberger, Ilka; Döpfner, Manfred

    2014-01-01

    Background: Our indicated Prevention program for preschool children with Externalizing Problem behavior (PEP) demonstrated improved parenting and child problem behavior in a randomized controlled efficacy trial and in a study with an effectiveness design. The aim of the present analysis of data from the randomized controlled trial was to identify…

  19. On the recent M=6.1 earthquake occurred at Kefalonia island (South-West Greece) on 26 January 2014: Manifestations of an Earth system in critical state

    CERN Document Server

    Contoyiannis, Y; Kopanas, J; Antonopoulos, G; Koulouras, G; Eftaxias, K; Nomicos, C

    2014-01-01

    In this paper we show, in terms of fracture-induced electromagnetic emissions (EME) recorded two days prior to the earthquake of Kefalonia (Cephalonia), Greece [(38.22o N, 20.53oE), 26 January 2014, M=6.1] that the Earth system around the focal area came to critical condition two days before the earthquake occurence. Specifically, the MHz EME recorded by the remote telemetric stations on the island of Kefalonia and the neighboring island of Zante came simultaneously to critical conditions. The analysis was performed by means of the method of critical fluctuations (MCF) revealing critical features.

  20. Seismic evidence for rock damage and healing on the San Andreas fault associated with the 2004 M 6.0 Parkfield earthquake

    Science.gov (United States)

    Li, Y.-G.; Chen, P.; Cochran, E.S.; Vidale, J.E.; Burdette, T.

    2006-01-01

    We deployed a dense linear array of 45 seismometers across and along the San Andreas fault near Parkfield a week after the M 6.0 Parkfield earthquake on 28 September 2004 to record fault-zone seismic waves generated by aftershocks and explosions. Seismic stations and explosions were co-sited with our previous experiment conducted in 2002. The data from repeated shots detonated in the fall of 2002 and 3 months after the 2004 M 6.0 mainshock show ???1.0%-1.5% decreases in seismic-wave velocity within an ???200-m-wide zone along the fault strike and smaller changes (0.2%-0.5%) beyond this zone, most likely due to the coseismic damage of rocks during dynamic rupture in the 2004 M 6.0 earthquake. The width of the damage zone characterized by larger velocity changes is consistent with the low-velocity waveguide model on the San Andreas fault, near Parkfield, that we derived from fault-zone trapped waves (Li et al., 2004). The damage zone is not symmetric but extends farther on the southwest side of the main fault trace. Waveform cross-correlations for repeated aftershocks in 21 clusters, with a total of ???130 events, located at different depths and distances from the array site show ???0.7%-1.1% increases in S-wave velocity within the fault zone in 3 months starting a week after the earthquake. The velocity recovery indicates that the damaged rock has been healing and regaining the strength through rigidity recovery with time, most likely . due to the closure of cracks opened during the mainshock. We estimate that the net decrease in seismic velocities within the fault zone was at least ???2.5%, caused by the 2004 M 6.0 Parkfield earthquake. The healing rate was largest in the earlier stage of the postmainshock healing process. The magnitude of fault healing varies along the rupture zone, being slightly larger for the healing beneath Middle Mountain, correlating well with an area of large mapped slip. The fault healing is most prominent at depths above ???7 km.

  1. 布鲁氏菌M5-90△WboA基因缺失株的构建及免疫效果的初步评价%Construction and preliminary evaluation of immune effects of deletion mutant of WboA gene of Brucella melitensis vaccine M5-90

    Institute of Scientific and Technical Information of China (English)

    张艳; 陈创夫; 张辉; 张沾; 李志强; 张俊波; 孟仁; 王震

    2011-01-01

    Vaccination is a major measure for prevention of brucellosis, but it is unable to be distinguished from the vaccinated to natural infected animals. In this study, the WboA gene was knocked out of the genomic DNA of Brucelh melitensis vaccine M5-90 strain to construct the recombinant M5-90 A WboA by homologous recombination. The test results showed that M5-90 A WboA was less virulent than that of the parent M5-90 strain (p<0.01). Humoral immunity and cellular immunity tests showed that there was no significant difference between M5-90A WboA and M5-90 parent strain (p<0.05). BALB/c mice were immunized with M5-90 A WboA or M5-90 and challenged with virulent strain 16M and the survival rate were 10% and 20%, respectively, indicating that the M5-90 A WboA provided the similar protection of M5-90 strain. Agglutination test and western blot showed that the serum response of M5-90 △ WboA in vaccinated mice were negative. These results indicated that M5-90 A WboA strain might be a promising vaccine against brucellosis, and could be distinguished from the vaccine immunization to natural infection in animals by serum test.%为获得毒力较弱并能区分自然感染和疫苗免疫的布鲁氏菌候选疫苗株,本研究用PCR方法扩增WboA基因的上下游同源臂序列,构建重组质粒pGEM-7zf-△WboA-Sac,电转化布鲁氏菌M5-90感受态细胞,筛选布鲁氏菌疫苗株M5-90的WboA基因缺失株,并对获得的M5-90△WboA遗传稳定性、毒力、免疫保护性、抗体水平等指标进行检测.实验结果表明M5-90△WboA株的毒力比M5-90株明显减弱,差异极显著(p<0.01),体液免疫和细胞免疫结果表明M5-90△WboA株与亲本M5-90株相比差异不显著(p<0.05),M5-90△WboA株和亲本株的保护率分别为10%和20%,表明M5-90△WboA株与M5-90株具有相似的保护性.凝集试验和western blot试验显示M5-90△WboA株免疫小鼠的血清反应结果为阴性.本研究构建的布鲁氏菌基因缺失株M5-90△WboA

  2. Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic

    Directory of Open Access Journals (Sweden)

    Ward Naomi

    2006-08-01

    Full Text Available Abstract Background Protein translocation to the proper cellular destination may be guided by various classes of sorting signals recognizable in the primary sequence. Detection in some genomes, but not others, may reveal sorting system components by comparison of the phylogenetic profile of the class of sorting signal to that of various protein families. Results We describe a short C-terminal homology domain, sporadically distributed in bacteria, with several key characteristics of protein sorting signals. The domain includes a near-invariant motif Pro-Glu-Pro (PEP. This possible recognition or processing site is followed by a predicted transmembrane helix and a cluster rich in basic amino acids. We designate this domain PEP-CTERM. It tends to occur multiple times in a genome if it occurs at all, with a median count of eight instances; Verrucomicrobium spinosum has sixty-five. PEP-CTERM-containing proteins generally contain an N-terminal signal peptide and exhibit high diversity and little homology to known proteins. All bacteria with PEP-CTERM have both an outer membrane and exopolysaccharide (EPS production genes. By a simple heuristic for screening phylogenetic profiles in the absence of pre-formed protein families, we discovered that a homolog of the membrane protein EpsH (exopolysaccharide locus protein H occurs in a species when PEP-CTERM domains are found. The EpsH family contains invariant residues consistent with a transpeptidase function. Most PEP-CTERM proteins are encoded by single-gene operons preceded by large intergenic regions. In the Proteobacteria, most of these upstream regions share a DNA sequence, a probable cis-regulatory site that contains a sigma-54 binding motif. The phylogenetic profile for this DNA sequence exactly matches that of three proteins: a sigma-54-interacting response regulator (PrsR, a transmembrane histidine kinase (PrsK, and a TPR protein (PrsT. Conclusion These findings are consistent with the hypothesis

  3. Psycho-education with problem solving (PEPS therapy for adults with personality disorder: A pragmatic multi-site community-based randomised clinical trial

    Directory of Open Access Journals (Sweden)

    Duggan Conor

    2011-08-01

    Full Text Available Abstract Background Impairment in social functioning is a key component of personality disorder. Therefore psycho-education and problem solving (PEPS therapy may benefit people with this disorder. Psycho-education aims to educate, build rapport, and motivate people for problem solving therapy. Problem solving therapy aims to help clients solve interpersonal problems positively and rationally, thereby improving social functioning and reducing distress. PEPS therapy has been evaluated with community adults with personality disorder in an exploratory trial. At the end of treatment, compared to a wait-list control group, those treated with PEPS therapy showed better social functioning, as measured by the Social Functioning Questionnaire (SFQ. A definitive evaluation is now being conducted to determine whether PEPS therapy is a clinically and cost-effective treatment for people with personality disorder Methods This is a pragmatic, two-arm, multi-centre, parallel, randomised controlled clinical trial. The target population is community-dwelling adults with one or more personality disorder, as identified by the International Personality Disorder Examination (IPDE. Inclusion criteria are: Living in the community (including residential or supported care settings; presence of one or more personality disorder; aged 18 or over; proficiency in spoken English; capacity to provide informed consent. Exclusion criteria are: Primary diagnosis of a functional psychosis; insufficient degree of literacy, comprehension or attention to be able to engage in trial therapy and assessments; currently engaged in a specific programme of psychological treatment for personality disorder or likely to start such treatment during the trial period; currently enrolled in any other trial. Suitable participants are randomly allocated to PEPS therapy plus treatment as usual (TAU or TAU only. We aim to recruit 340 men and women. The primary outcome is social functioning as measured

  4. Psycho-education with problem solving (PEPS) therapy for adults with personality disorder: a pragmatic multi-site community-based randomised clinical trial.

    Science.gov (United States)

    McMurran, Mary; Crawford, Mike J; Reilly, Joseph G; McCrone, Paul; Moran, Paul; Williams, Hywel; Adams, Clive E; Duggan, Conor; Delport, Juan; Whitham, Diane; Day, Florence

    2011-08-24

    Impairment in social functioning is a key component of personality disorder. Therefore psycho-education and problem solving (PEPS) therapy may benefit people with this disorder. Psycho-education aims to educate, build rapport, and motivate people for problem solving therapy. Problem solving therapy aims to help clients solve interpersonal problems positively and rationally, thereby improving social functioning and reducing distress. PEPS therapy has been evaluated with community adults with personality disorder in an exploratory trial. At the end of treatment, compared to a wait-list control group, those treated with PEPS therapy showed better social functioning, as measured by the Social Functioning Questionnaire (SFQ). A definitive evaluation is now being conducted to determine whether PEPS therapy is a clinically and cost-effective treatment for people with personality disorder This is a pragmatic, two-arm, multi-centre, parallel, randomised controlled clinical trial. The target population is community-dwelling adults with one or more personality disorder, as identified by the International Personality Disorder Examination (IPDE). Inclusion criteria are: Living in the community (including residential or supported care settings); presence of one or more personality disorder; aged 18 or over; proficiency in spoken English; capacity to provide informed consent. Exclusion criteria are: Primary diagnosis of a functional psychosis; insufficient degree of literacy, comprehension or attention to be able to engage in trial therapy and assessments; currently engaged in a specific programme of psychological treatment for personality disorder or likely to start such treatment during the trial period; currently enrolled in any other trial. Suitable participants are randomly allocated to PEPS therapy plus treatment as usual (TAU) or TAU only. We aim to recruit 340 men and women. The primary outcome is social functioning as measured by the SFQ. A reduction (i.e., an

  5. Epidermal growth factor inhibits glycylsarcosine transport and hPepT1 expression in a human intestinal cell line

    DEFF Research Database (Denmark)

    Nielsen, C U; Amstrup, J; Steffansen, B

    2001-01-01

    (max) decreased from 2.61 +/- 0.4 to 1.06 +/- 0.1 nmol x cm(-2) x min(-1) (n = 3, P PepT1 mRNA (using glucose-6-phosphate dehydrogenase mRNA as control......The human intestinal cell line Caco-2 was used as a model system to study the effects of epidermal growth factor (EGF) on peptide transport. EGF decreased apical-to-basolateral fluxes of [(14)C]glycylsarcosine ([(14)C]Gly-Sar) up to 50.2 +/- 3.6% (n = 6) of control values. Kinetic analysis...... of the fluxes showed that maximal flux (V(max)) of transepithelial transport decreased from 3.00 +/- 0.17 nmol x cm(-2) x min(-1) in control cells to 0.50 +/- 0.07 nmol x cm(-2) x min(-1) in cells treated with 5 ng/ml EGF (n = 6, P

  6. Successful full-scale deployments of advanced PGPR enhanced phytoremediation systems (PEPS) for decontamination of petroleum and salt impacted soils

    Energy Technology Data Exchange (ETDEWEB)

    Greenberg, B.; Huang, X.D.; Gerhardt, K.; Yu, X.M.; Liddycoat, S.; Lu, X.; Nykamp, J.; McCallum, B.; MacNeill, G.; Mosley, P.; Gurska, J.; Knezevich, N.; Zhong, H.; Gerwing, P. [Waterloo Univ., ON (Canada)

    2010-07-01

    This PowerPoint presentation described a phytoremediation system designed to remediate salt and petroleum contaminated sites. Phytoremediation techniques are cheaper than traditional methods of remediating soils. The phytoremediation process is comprised of volatilization, phytodegradation, and chelation processes. Plants uptake contaminants via a rhizodegradation process. The plants provide biomass for rapid remediation with a restoration time frame of between 2 to 3 years. PGPR enhanced phytoremediation systems (PEPS) have been studied over a 10 year period and successfully applied at polycyclic hydrocarbon (PHC) contaminated sites, gas stations, and salt-contaminated sites throughout Canada. Soils are tilled in order to expose contaminants to sunlight. hydrocarbon-degrading bacteria are then applied, followed by the application of a plant growth promoting rhizobacteria (PGPR) phytoremediation system that is typically applied to grass species prior to planting. Case studies of full-scale sites used to prove the concept for both salt and hydrocarbon contaminated soils were presented. tabs., figs.

  7. Design and verification of controllers for longitudinal oscillations using optimal control theory and numerical simulation: Predictions for PEP-II

    Energy Technology Data Exchange (ETDEWEB)

    Hindi, H.; Prabhakar, S.; Fox, J.; Teytelman, D.

    1997-12-01

    The authors present a technique for the design and verification of efficient bunch-by-bunch controllers for damping longitudinal multibunch instabilities. The controllers attempt to optimize the use of available feedback amplifier power--one of the most expensive components of a feedback system--and define the limits of closed loop system performance. The design technique alternates between analytic computation of single bunch optimal controllers and verification on a multibunch numerical simulator. The simulator identifies unstable coupled bunch modes and predicts their growth and damping rates. The results from the simulator are shown to be in reasonable agreement with analytical calculations based on the single bunch model. The technique is then used to evaluate the performance of a variety of controllers proposed for PEP-II.

  8. Colonic miRNA expression/secretion, regulated by intestinal epithelial PepT1, plays an important role in cell-to-cell communication during colitis.

    Directory of Open Access Journals (Sweden)

    Saravanan Ayyadurai

    Full Text Available PepT1 is a member of the proton-oligopeptide cotransporter family SLC15, which mediates the transport of di/tripeptides from intestinal lumen into epithelial cells. MicroRNAs (miRNAs, a small noncoding RNAs (21-23 nucleotides, post-transcriptionally regulate gene expression by binding to the 3'-untranslated regions (UTRs of their target mRNAs. Although the role of most miRNAs remains elusive, they have been implicated in vital cellular functions such as intestinal epithelial cells differentiation, proliferation, and apoptosis. In the present study, we investigated the effect of intestinal epithelial PepT1 expression on microRNA (miRNA expression/secretion in the colons of control mice and in mice with experimentally induced colonic inflammation (colitis. The colonic miRNA expression was deregulated in both colitis and control mice but the deregulation of miRNA expression/secretion was specific to colonic tissue and did not affect other tissues such as spleen and liver. Intestinal epithelial PepT1-dependent deregulation of colonic miRNA expression not only affects epithelial cells but also other cell types, such as intestinal macrophages. Importantly, we found the miRNA 23b which was known to be involved in inflammatory bowel disease was secreted and transported between cells to impose a gene-silencing effect on recipient intestinal macrophages. Based on our data, we may conclude that the expression of a specific protein, PepT1, in the intestine affects local miRNA expression/secretion in the colon on a tissue specific manner and may play an important role during the induction and progression of colitis. Colonic miRNA expression/secretion, regulated by intestinal epithelial PepT1, could play a crucial role in cell-to-cell communication during colitis.

  9. Transfection of infectious RNA and DNA/RNA layered vectors of semliki forest virus by the cell-penetrating peptide based reagent PepFect6.

    Directory of Open Access Journals (Sweden)

    Kalle Pärn

    Full Text Available Viral vectors have a wide variety of applications ranging from fundamental studies of viruses to therapeutics. Recombinant viral vectors are usually constructed using methods of reverse genetics to obtain the genetic material of the viral vector. The physicochemical properties of DNA and RNA make them unable to access cells by themselves, and they require assistance to achieve intracellular delivery. Non-viral delivery vectors can be used for this purpose if they enable efficient intracellular delivery without interfering with the viral life cycle. In this report, we utilize Semliki Forest virus (genus alphavirus based RNA and DNA vectors to study the transfection efficiency of the non-viral cell-penetrating peptide-based delivery vector PepFect6 in comparison with that of the cationic liposome-based Lipofectamine 2000, and assess their impact on viral replication. The optimal conditions for transfection were determined for both reagents. These results demonstrate, for the first time, the ability of PepFect6 to transport large (13-19 kbp constructs across the cell membrane. Curiously, DNA molecules delivered using the PepFect6 reagent were found to be transported to the cell nucleus approximately 1.5 hours later than DNA molecules delivered using the Lipofectamine 2000 reagent. Finally, although both PepFect6 and Lipofectamine 2000 reagents can be used for alphavirus research, PepFect6 is preferred because it does not induce changes in the normal cellular phenotype and it does not affect the normal replication-infection cycle of viruses in previously transfected cells.

  10. PEP725: monitoring of apple flowering in the D-A-CH region in 2015 compared with Schnellés map from 1965

    Science.gov (United States)

    Ungersböck, Markus; Paul, Anita; Hübner, Thomas; Koch, Elisabeth

    2016-04-01

    The main objective of PEP725 (Pan European Phenological database) is to promote and facilitate phenological research by delivering a pan European phenological database with an open, unrestricted data access for science, research and education. The project is funded by ZAMG, the Austrian ministry of science, research and economy and EUMETNET, the network of European meteorological services. So far 21 European meteorological services and 7 partners from different phenological network operators have joined PEP725.The first datasets in PEP725 date back to 1868; however, there are only a few observations available until 1950. From 1951 onwards, the phenological networks all over Europe developed rapidly. So far more than 11 800 000 of observations are stored now in the PEP725 database and approximately 40 % of all data are flowering records. In spring 2015 PEP725 has started to develop an online monitoring of selected phenological events in Austria, Germany and Switzerland. Since recently Deutscher Wetterdienst and meteoswiss offer their observers to upload their observations via web in real time mode. In Austria ZAMG introduced this web-based feature already in 2007 and offers a contemporary visualization tool (www.zamg.ac.at/phaenologie). Also some other European countries as for instance Italy, Sweden, The Netherlands, UK has been doing visualizations of ground phenology in real time for some years. But these efforts always end at the national borders. Here we will present a trans boundary visualization of apple flowering in 2015, a normal year compared to the mean 1981 to 2010 but early when looking at Schnellés European map of apple flowering in Europe which comprises the years from 1931 to 1937. In the D-A-CH region apple flowering started in East and Southeast Austria as well as in the upper Rhine valley in the first decade of April and moved northwards and upwards till it reached Northern Germany and higher lying Alpine areas at the beginning of May 2015.

  11. Effect of CO sub 2 enrichment and high photosynthetic photon flux densities (PPFD) on rubisco and PEP-case activities of in vitro cultured strawberry plants

    Energy Technology Data Exchange (ETDEWEB)

    Desjardins, Y.; Beeson, R.; Gosselin, A. (Laval Univ., Quebec (Canada))

    1989-04-01

    Standard growing conditions in vitro (low light and CO{sub 2}) are not conducive to autotrophy. An experiment was conducted to improve photosynthesis in vitro in the hope of increasing survival in acclimatization. A factorial experiment was elaborated where CO{sub 2} and PPFD were supplied to in vitro cultured strawberry plants in the rooting stage. Activities of carboxylating enzymes were determined after 4 weeks of culture. The activities of non-activated and activated rubisco and PEP-Case were measured after extraction of the enzymes and a reaction with NaH{sup 14}CO{sub 3} followed by scintillation counting spectroscopy. High CO{sub 2} concentration significantly increased net assimilation rates (NAR) by 165% over the control for both 1650 and 3000 ppm CO{sub 2}. High PPFD only increased NAR by 12 and 35% for 150 and 250 {mu}mol{center dot}m{sup {minus}2}{center dot}s{sup {minus}1} respectively over the control. Plants grown at 3000 ppm CO{sub 2} had the highest level of chlorophyll/g FW with 97% more than the control. The activity of PEP-Case was the highest at high light levels and high CO{sub 2} with rates of 1.65 for 1650 ppm versus 1.22 mmol CO{sub 2} mg{sup {minus}1} chl. h{sup {minus}1} at 250 {mu}mol{center dot}m{sup {minus}2}{center dot}s{sup {minus}1}. There was no difference in PEP activity at low light levels. The rubisco activity was lower at 1650 and 3000 ppm CO{sub 2}. Increases in NAR correlate more closely to the PEP-Case than to Rubisco activity. Physiological significance of high activity of PEP-Case over rubisco will be discussed.

  12. Afterslip behavior following the M6.0, 2014 South Napa earthquake with implications for afterslip forecasting on other seismogenic faults

    Science.gov (United States)

    Lienkaemper, James J.; DeLong, Stephen B.; Domrose, Carolyn J; Rosa, Carla M.

    2016-01-01

    The M6.0, 24 Aug. 2014 South Napa, California, earthquake exhibited unusually large slip for a California strike-slip event of its size with a maximum coseismic surface slip of 40-50 cm in the north section of the 15 km-long rupture. Although only minor (Napa afterslip suggests how we might approach the scientific and engineering challenges of afterslip from a much larger M~7 earthquake anticipated on the nearby, urban Hayward Fault. However, we expect its afterslip to last much longer than one year.The M6.0, 24 Aug. 2014 South Napa, California, earthquake exhibited unusually large slip for a California strike-slip event of its size with a maximum coseismic surface slip of 40-50 cm in the north section of the 15 km-long rupture. Although only minor (Napa afterslip suggests how we might approach the scientific and engineering challenges of afterslip from a much larger M~7 earthquake anticipated on the nearby, urban Hayward Fault. However, we expect its afterslip to last much longer than one year.

  13. Space conditions during a month of a sequence of six M > 6.8 earthquakes ending with the tsunami of 26 December 2004

    Directory of Open Access Journals (Sweden)

    A. Papandreou

    2012-05-01

    Full Text Available This paper examines space and seismological data for the time period about one month before the giant Sumatra-Andaman strong (9.3 earthquake (EQ. The combination of seismological and space data reveals some interesting features for this time period: (1 six successive high speed solar wind streams obviously triggering a sudden increase of geomagnetic activity were all followed by strong to giant (M > 6.8 EQs, (2 the 6 strong EQs present certain spatial-temporal constraints, with the epicentre of the EQs occuring at the edges of the Pacific Plate (the Sumatra-Andaman EQ occurred at the end of this series of EQs, eastward of the first one, in a clockwise direction, (3 the EQs occurred after a sudden increase of geomagnetic activity, as inferred from the 3 h-Kp index, following a quiet geomagnetic period and (4 the time delay of the M > 6.2 earthquakes (in the broad area examined from the last maximum sudden Kp increase was on average ~1.5 days. These findings from the study of the Earth's space environment during the month preceding the Sumatra-Andaman giant (9.3 EQ provide new information for a possible better understanding of the Sun-magnetosphere-lithosphere coupling.

  14. Salivaricin D, a novel intrinsically trypsin-resistant lantibiotic from Streptococcus salivarius 5M6c isolated from a healthy infant.

    Science.gov (United States)

    Birri, Dagim Jirata; Brede, Dag Anders; Nes, Ingolf F

    2012-01-01

    In this work, we purified and characterized a newly identified lantibiotic (salivaricin D) from Streptococcus salivarius 5M6c. Salivaricin D is a 34-amino-acid-residue peptide (3,467.55 Da); the locus of the gene encoding this peptide is a 16.5-kb DNA segment which contains genes encoding the precursor of two lantibiotics, two modification enzymes (dehydratase and cyclase), an ABC transporter, a serine-like protease, immunity proteins (lipoprotein and ABC transporters), a response regulator, and a sensor histidine kinase. The immunity gene (salI) was heterologously expressed in a sensitive indicator and provided significant protection against salivaricin D, confirming its immunity function. Salivaricin D is a naturally trypsin-resistant lantibiotic that is similar to nisin-like lantibiotics. It is a relatively broad-spectrum bacteriocin that inhibits members of many genera of Gram-positive bacteria, including the important human pathogens Streptococcus pyogenes and Streptococcus pneumoniae. Thus, Streptococcus salivarius 5M6c may be a potential biological agent for the control of oronasopharynx-colonizing streptococcal pathogens or may be used as a probiotic bacterium.

  15. Large-scale contraction and subsequent disruption of coronal loops during various phases of the M6.2 flare associated with the confined flux rope eruption

    CERN Document Server

    Kushwaha, Upendra; Veronig, Astrid M; Moon, Yong-Jae

    2015-01-01

    We present a detailed multi-wavelength study of the M6.2 flare which was associated with a confined eruption of a prominence using TRACE, RHESSI, and NoRH observations. The pre-flare phase of this event is characterized by spectacular large-scale contraction of overlying extreme ultraviolet (EUV) coronal loops during which the loop system was subjected to an altitude decrease of ~20 Mm for an extended span of ~30 min. This contraction phase is accompanied by sequential EUV brightenings associated with hard X-ray (HXR) (up to 25 keV) and microwave (MW) sources from low-lying loops in the core of the flaring region which together with X-ray spectra indicate strong localized heating in the source region before the filament activation and associated M-class flare. With the onset of the impulsive phase of the M6.2 flare, we detect HXR and MW sources that exhibit intricate temporal and spatial evolution in relation with the fast rise of the prominence. Following the flare maximum, the filament eruption slowed down ...

  16. Sequencing and Analysis of the Pseudomonas fluorescens GcM5-1A Genome: A Pathogen Living in the Surface Coat of Bursaphelenchus xylophilus.

    Directory of Open Access Journals (Sweden)

    Kai Feng

    Full Text Available It is known that several bacteria are adherent to the surface coat of pine wood nematode (Bursaphelenchus xylophilus, but their function and role in the pathogenesis of pine wilt disease remains debatable. The Pseudomonas fluorescens GcM5-1A is a bacterium isolated from the surface coat of pine wood nematodes. In previous studies, GcM5-1A was evident in connection with the pathogenicity of pine wilt disease. In this study, we report the de novo sequencing of the GcM5-1A genome. A 600-Mb collection of high-quality reads was obtained and assembled into sequence contigs spanning a 6.01-Mb length. Sequence annotation predicted 5,413 open reading frames, of which 2,988 were homologous to genes in the other four sequenced P. fluorescens isolates (SBW25, WH6, Pf0-1 and Pf-5 and 1,137 were unique to GcM5-1A. Phylogenetic studies and genome comparison revealed that GcM5-1A is more closely related to SBW25 and WH6 isolates than to Pf0-1 and Pf-5 isolates. Towards study of pathogenesis, we identified 79 candidate virulence factors in the genome of GcM5-1A, including the Alg, Fl, Waa gene families, and genes coding the major pathogenic protein fliC. In addition, genes for a complete T3SS system were identified in the genome of GcM5-1A. Such systems have proved to play a critical role in subverting and colonizing the host organisms of many gram-negative pathogenic bacteria. Although the functions of the candidate virulence factors need yet to be deciphered experimentally, the availability of this genome provides a basic platform to obtain informative clues to be addressed in future studies by the pine wilt disease research community.

  17. Sequencing and Analysis of the Pseudomonas fluorescens GcM5-1A Genome: A Pathogen Living in the Surface Coat of Bursaphelenchus xylophilus.

    Science.gov (United States)

    Feng, Kai; Li, Ronggui; Chen, Yingnan; Zhao, Boguang; Yin, Tongming

    2015-01-01

    It is known that several bacteria are adherent to the surface coat of pine wood nematode (Bursaphelenchus xylophilus), but their function and role in the pathogenesis of pine wilt disease remains debatable. The Pseudomonas fluorescens GcM5-1A is a bacterium isolated from the surface coat of pine wood nematodes. In previous studies, GcM5-1A was evident in connection with the pathogenicity of pine wilt disease. In this study, we report the de novo sequencing of the GcM5-1A genome. A 600-Mb collection of high-quality reads was obtained and assembled into sequence contigs spanning a 6.01-Mb length. Sequence annotation predicted 5,413 open reading frames, of which 2,988 were homologous to genes in the other four sequenced P. fluorescens isolates (SBW25, WH6, Pf0-1 and Pf-5) and 1,137 were unique to GcM5-1A. Phylogenetic studies and genome comparison revealed that GcM5-1A is more closely related to SBW25 and WH6 isolates than to Pf0-1 and Pf-5 isolates. Towards study of pathogenesis, we identified 79 candidate virulence factors in the genome of GcM5-1A, including the Alg, Fl, Waa gene families, and genes coding the major pathogenic protein fliC. In addition, genes for a complete T3SS system were identified in the genome of GcM5-1A. Such systems have proved to play a critical role in subverting and colonizing the host organisms of many gram-negative pathogenic bacteria. Although the functions of the candidate virulence factors need yet to be deciphered experimentally, the availability of this genome provides a basic platform to obtain informative clues to be addressed in future studies by the pine wilt disease research community.

  18. The transmembrane tyrosines Y56, Y91 and Y167 play important roles in determining the affinity and transport rate of the rabbit proton-coupled peptide transporter PepT1.

    Science.gov (United States)

    Pieri, Myrtani; Gan, Christine; Bailey, Patrick; Meredith, David

    2009-11-01

    The mammalian proton-coupled peptide transporter PepT1 is widely accepted as the major route of uptake for dietary nitrogen, as well as being responsible for the oral absorption of a number of classes of drugs, including beta-lactam antibiotics and angiotensin-converting enzyme (ACE) inhibitors. Using site-directed mutagenesis and zero-trans transport assays, we investigated the role of conserved tyrosines in the transmembrane domains (TMDs) of rabbit PepT1 as predicted by hydropathy plots. All the individual TMD tyrosines were substituted with phenylalanine and shown to retain the ability to traffic to the plasma membrane of Xenopus laevis oocytes. These single substitutions of TMD tyrosines by phenylalanine residues did not affect the proton dependence of peptide uptake, with all retaining wild-type PepT1-like pH dependence. Individual mutations of four of the nine TMD residue tyrosines (Y64, Y287, Y345 and Y587) were without measurable effect on PepT1 function, whereas the other five (Y12, Y56, Y91, Y167 and Y345) were shown to result in altered transport function compared to the wild-type PepT1. Intriguingly, the affinity of Y56F-PepT1 was found to be dramatically increased (approximately 100-fold) in comparison to that of the wild-type rabbit PepT1. Y91 mutations also affected the substrate affinity of the transporter, which increased in line with the hydrophilicity of the substituted amino acid (F>Y>Q>R). Y167 was demonstrated to play a pivotal role in rabbit PepT1 function since Y167F, Y167R and Y167Q demonstrated very little transport function. These results are discussed with regard to a proposed mechanism for PepT1 substrate binding.

  19. Specificity shifts in the rRNA and tRNA nucleotide targets of archaeal and bacterial m5U methyltransferases

    DEFF Research Database (Denmark)

    Auxilien, Sylvie; Rasmussen, Anette; Rose, Simon;

    2011-01-01

    Methyltransferase enzymes that use S-adenosylmethionine as a cofactor to catalyze 5-methyl uridine (m(5)U) formation in tRNAs and rRNAs are widespread in Bacteria and Eukaryota, but are restricted to the Thermococcales and Nanoarchaeota groups amongst the Archaea. The RNA m(5)U methyltransferases...... appear to have arisen in Bacteria and were then dispersed by horizontal transfer of an rlmD-type gene to the Archaea and Eukaryota. The bacterium Escherichia coli has three gene paralogs and these encode the methyltransferases TrmA that targets m(5)U54 in tRNAs, RlmC (formerly RumB) that modifies m(5)U......, however, neither of the two P. abyssi enzymes displays RlmD-like activity in vitro. PAB0719 acts in a TrmA-like manner to catalyze m(5)U54 methylation in P. abyssi tRNAs, and here we show that PAB0760 possesses RlmC-like activity and specifically methylates the nucleotide equivalent to U747 in P. abyssi...

  20. PEP-1-SOD1对离体缺血再灌注损伤大鼠心肌Bax、Bcl-2蛋白表达的影响%Effects of PEP-1-SOD1 on Expression of Bax,Bcl-2 of Myocardium in Rats Induced with Ischemia-Reperfusion Injury ex vivo

    Institute of Scientific and Technical Information of China (English)

    柯尊平; 王家宁; 王磊; 唐俊明; 杨建业; 黄永章; 张宏考

    2011-01-01

    Objective To investigate the effects of PEP-1 mediated human Cu,Zn superoxide dismutase on the myocardium apoptosis induced by ischemia-reperfusion injury(IRI) in rats ex vivo.Methods The MIRI rats model were prepared with Langendorff perfusion system ex vivo.The model rats were randomly divided into control group ,SOD1 pretreated group,PEP1-SOD1 pretreated with 25,50,100 μmol/L groups.The myocardium apoptosis and expression of Bax, Bcl-2 were determined with TUNEL method and immunofluorescencein method after reperfusion.Results Compared with control and SOD1 groups,the apoptosis indexes(AI) were significantly decreased,the expression of Bcl-2 were upregulated,the expression of Bax were downregulated in all PEP-1-SOD1 groups( all P < 0.01 ).Conclusion The fusion protein PEP-1-SOD1 could inhibit the apoptosis of myocardium in MIRI rats,which may be related to its upregulation of Bax expression and downregulation of Bcl-2 expression.%目的:研究细胞穿透肽PEP-1介导人铜锌-超氧化物歧化酶(cu,Zn-SOD,SOD1)对大鼠离体心肌缺血再灌注损伤(MIRI)细胞凋亡的影响.方法:采用Langendorff灌流系统对离体大鼠心脏进行停灌-复灌建立心肌缺血再灌注损伤模型.大鼠随机分为对照组、SODI蛋白预处理组,25、50、100μmol/L PEP-1-SOD1蛋白预处理组.复灌结束后,TUNEL法检测心肌细胞凋亡,免疫荧光法检测心肌组织Bax、Bel-2蛋白表达.结果:与对照组及SOD1组相比,各PEP-1-SOD1组心肌细胞凋亡指数(AI)显著下降,Bcl-2蛋白表达升高,Bax蛋白表达显著减少(P<0.01).结论:PEP-1-SOD1融合蛋白可抑制离体心脏缺血再灌注损伤大鼠心肌细胞凋亡,其机制可能与上调Bax表达及下调Bcl-2表达有关.

  1. Effects of PEP-1 Superoxide Dismutase on B-cell lymphoma-2 in Rats after Cerebral Ischemia and Reperfusion%PEP-1超氧化物歧化酶对大鼠脑缺血再灌注后Bcl-2的影响

    Institute of Scientific and Technical Information of China (English)

    汪健; 周发明; 陈涛; 席刚明; 邓晓玲; 赵斌

    2011-01-01

    Objective: To observe the cell penetrating peptide-copper, zinc superoxide dismutase (PEP-1-SOD1) preconditioning on focal cerebral ischemia-reperfusion injury in the brain and its protective mechanism to improve. Methods: Suture technique in rats 6h after focal cerebral ischemia-reperfusion injury model, the neural behavior scores, and by HE histological changes of nerve cell damage,immune staining B-cell lymphoma gene-2 (B-cell lymphoma-2, Bcl-2) protein expression. Results:Saline control group (ischemia -reperfusion group or model group) neurological disorders were significantly higher than sham operation group (P<0.05), compared with model group, PEP-1-SOD1 pretreatment could reduce the neurological deficits score (P<0.05); light microscope, the sham operation group of neurons was normal, PEP-1-SOD1 pretreatrnent group and the ischemia reperfusion group had different levels of ischemia-reperfusion injury, PEP-1-SOD1 pretreatment group than in the ischemia-reperfusion group of light damage;sham group the expression of Bcl-2 protein in very weak, ischemia-reperfnsion group and PEP-1-SOD1 pretreatment group 6h after cerebral isehemia-reperfusion in the ischemic penumbra appears around the Bcl-2 protein expression, 24 h reached a peak, 48h expression started to decrease; compared with the sham group, PEP-1-SOD1 pretreatment group and the ischemia-reperfusion group Bcl-2 protein positive cells was significantly increased (P<0.05); compared with the ischemia-reperfusion group, PEP-1-SOD1 pretreatment group Bcl-2 protein positive cells was significantly increased (P <0.05). Conclusions: PEP-1-SOD1 on focal cerebral ischemia-reperfusion injury had a protective effect,PEP-1-SOD 1 could increase the expression of Bcl-2 proteins play a role in cerebral protection.%目的:观察细胞穿透肤-铜,锌超氧化物歧化酶(PEP-1-SOD1)预处理对大鼠局灶性脑缺血再灌注损伤的改善作用及其脑保护机制.方法:线栓法

  2. Numerical simulation of dynamic Coulomb stress changes induced by M6.5 earthquake in Wuding, Yunnan and its relationship with aftershocks

    Institute of Scientific and Technical Information of China (English)

    HU Xiong-lin; WU Xiao-ping; YANG Run-hai; FU Hong; HU Jia-fu; HUANG Yong

    2008-01-01

    Based on the discrete wavenumber method, we calculate the fields of dynamic Coulomb rupture stress changes and static stress changes caused by M6.5 earthquake in Wuding, and study their relationship with the subsequent aftershocks. The results show that the spatial distribution patterns of the positive region of dynamic stress peak value and static stress peak value are similarly asymmetric, which are basically identical with distribution features of aftershock. The dynamic stress peak value and the static stress in the positive region are more than 0.1 MPa and 0.01 MPa of the triggering threshold, respectively, which indicates that the dynamic and static stresses are helpful for the occurrence of aftershock. This suggests that both influences of dynamic and static stresses should be con-sidered other than only either of them when studying aftershock triggering in near field.

  3. Application of scaling-rule theory in crustal rock fracture to studying characteristics of seismological precursors associated with M=6.1 Shandan-Minle earthquake

    Institute of Scientific and Technical Information of China (English)

    RONG Dai-lu; LI Ya-rong; HAN Xiao-ming

    2006-01-01

    In the paper, we introduce Allegre's scaling-rule theory of rock fracture and the probability to develop a method for predicting earthquake occurrence time on its basis. As an example, we study the characteristics of seismological precursors (seismic spatial correlation length and coda Qc) associated with the earthquake (M=6.1) occurred in Shandan-Minle, Gansu Province. The results show an increasing trend of seismic spatial correlation length and coda Qc before the earthquake. And a power exponent relation is used to fit the increasing variation form of these two parameters. The study has provided a basis for creating a method and finding indexes to predict the earthquake occurrence time by using the monitored seismic spatial correlation length and coda Qc.

  4. Herencia de la resistencia al virus del mosaico deformante del pimentón PepDMV en Capsicum Inheritance of resistance to the deforming pepper mosaic virus, PepDMV, in Capsicum

    Directory of Open Access Journals (Sweden)

    Mario Augusto García Dávila

    2009-10-01

    Full Text Available En busca de determinar el modo de herencia de la resistencia en tres materiales resistentes, se hicieron cruzamientos hacia tres líneas susceptibles. Se siguió el método del retrocruzamiento propuesto por Warner (1952 fundamentado en el modelo matemático de Fisher Immer y Tedin (1932 descrito con detalle por Mater (1949 y Jenkins (1982, 1984 en el cual se descompone la varianza genética en tres componentes: aditiva, dominancia y epistática. El modelo del retrocruzamiento incluye los dos parentales, el hibrido de la primera generación y la autofecunfación de la F1 para formar la población F2 y las retrocruzas hacia ambos padres. Las poblaciones fueron evaluadas a resistencia al virus del mosaico del pimentón PepDMV en condiciones de invernadero. Los resultados mostraron que el modelo aditivodominancia explicó la resistencia en los híbridos formados entre materiales resistentes y susceptibles. Los genes con acción heredable transmiten a la descendencia el efecto de resistencia. La ganancia de la resistencia viral se da por la presencia de parentales resistentes.With the aim to determine the mode of inheritance in three resistant materials, crosses were performed towards three susceptible lines. We followed the backcrossing method used by Warner (1952, based on the mathematical model of Fisher Immer and tedin (1932, described in detail by Mater (1949 and Jenkins (1982, 1984. In this method the genetic variance is partitioned into three components: additive, dominant and epistatic. The backcross method includes the two parents, the F1 hybrid, and the self-pollination of the F1 to form the F2 population, and the backcrosses to both parents. The populations were evaluated for resistance to the pepper mosaic virusPepDMV in greenhouse conditions. The results showed that the model additive-dominant explained the resistance in the hybrids formed between resistant and susceptible material. The genes with heritable action transmit to their

  5. Site-directed mutagenesis of Arginine282 suggests how protons and peptides are co-transported by rabbit PepT1.

    Science.gov (United States)

    Pieri, Myrtani; Hall, Dashiell; Price, Richard; Bailey, Patrick; Meredith, David

    2008-01-01

    The mammalian proton-coupled peptide transporter PepT1 is the major route of uptake for dietary nitrogen, as well as the oral absorption of a number of drugs, including beta-lactam antibiotics and angiotensin-converting enzyme inhibitors. Here we have used site-directed mutagenesis to investigate further the role of conserved charged residues in transmembrane domains. Mutation of rabbit PepT1 arginine282 (R282, transmembrane domain 7) to a positive (R282K) or physiologically titratable residue (R282H), resulted in a transporter with wild-type characteristics when expressed in Xenopus laevis oocytes. Neutral (R282A, R282Q) or negatively charged (R282D, R282E) substitutions gave a transporter that was not stimulated by external acidification (reducing pH(out) from 7.4 to 5.5) but transported at the same rate as the wild-type maximal rate (pH(out) 5.5); however, only the R282E mutation was unable to concentrate substrate above the extracellular level. All of the R282 mutants showed trans-stimulation of efflux comparable to the wild-type, except R282E-PepT1 which was faster. A conserved negatively charged residue, aspartate341 (D341) in transmembrane domain 8 was implicated in forming a charge pair with R282, as R282E/D341R- and R282D/D341R-PepT1 had wild-type transporter characteristics. Despite their differences in ability to accumulate substrate, both R282E- and R282D-PepT1 showed an increased charge:peptide stoichiometry over the wild-type 1:1 ratio for the neutral dipeptide Gly-l-Gln, measured using two-electrode voltage clamp. This extra charge movement was linked to substrate transport, as 4-aminobenzoic acid, which binds but is not translocated, did not induce membrane potential depolarisation in R282E-expressing oocytes. A model is proposed for the substrate binding/translocation process in PepT1.

  6. Crystal structure of the PepSY-containing domain of the YpeB protein involved in germination of bacillus spores.

    Science.gov (United States)

    Üstok, Fatma Işık; Chirgadze, Dimitri Y; Christie, Graham

    2015-10-01

    The crystal structure of the C-terminal domain of the Bacillus megaterium YpeB protein has been solved by X-ray crystallography to 1.80-Å resolution. The full-length protein is essential in stabilising the SleB cortex lytic enzyme in Bacillus spores, and may have a role in regulating SleB activity during spore germination. The YpeB-C crystal structure comprises three tandemly repeated PepSY domains, which are aligned to form an extended laterally compressed molecule. A predominantly positively charged region located in the second PepSY domain may provide a site for protein interactions that are important in stabilising SleB and YpeB within the spore.

  7. Structure determination of a major facilitator peptide transporter: Inward facing PepTSt from Streptococcus thermophilus crystallized in space group P3121

    Science.gov (United States)

    Quistgaard, Esben M.; Martinez Molledo, Maria

    2017-01-01

    Major facilitator superfamily (MFS) peptide transporters (typically referred to as PepT, POT or PTR transporters) mediate the uptake of di- and tripeptides, and so play an important dietary role in many organisms. In recent years, a better understanding of the molecular basis for this process has emerged, which is in large part due to a steep increase in structural information. Yet, the conformational transitions underlying the transport mechanism are still not fully understood, and additional data is therefore needed. Here we report in detail the detergent screening, crystallization, experimental MIRAS phasing, and refinement of the peptide transporter PepTSt from Streptococcus thermophilus. The space group is P3121, and the protein is crystallized in a monomeric inward facing form. The binding site is likely to be somewhat occluded, as the lobe encompassing transmembrane helices 10 and 11 is markedly bent towards the central pore of the protein, but the extent of this potential occlusion could not be determined due to disorder at the apex of the lobe. Based on structural comparisons with the seven previously determined P212121 and C2221 structures of inward facing PepTSt, the structural flexibility as well as the conformational changes mediating transition between the inward open and inward facing occluded states are discussed. In conclusion, this report improves our understanding of the structure and conformational cycle of PepTSt, and can furthermore serve as a case study, which may aid in supporting future structure determinations of additional MFS transporters or other integral membrane proteins. PMID:28264013

  8. Immune modulation in type 1 diabetes mellitus using DiaPep277: a short review and update of recent clinical trial results.

    Science.gov (United States)

    Eldor, Roy; Kassem, Sameer; Raz, Itamar

    2009-05-01

    In type 1 diabetes mellitus, autoimmune T-cells mount an attack on insulin producing beta-cells eventually causing hyperglycemia. It is hypothesized, that to prevent and treat this disease, one must interfere with the autoimmune process. To avoid hazardous side effects, this intervention should not cause a global immune suppression but immune modulation. DiaPep277 (peptide 277) is a 24 amino acid peptide derived from positions 437-460 in HSP60. It has recently been shown to have an immune modulatory effect on diabetogenic T cells in animal models of diabetes. It has also been recently implicated as a possible auto-antigen in type 1 diabetes. Promising results in animal models led to phase 1 to 3 human clinical trials in patients with type 1 diabetes, the results of which are the focus of this review. A combined analysis of all the adult phase II studies revealed that DiaPep277 significantly inhibits the decline in stimulated C-peptide secretion (thus preserving endogenous insulin secretion). This effect was more pronounced in patients with a high beta-cell reserve at the start of the treatment. Furthermore, opposite trends in glycemic control of DiaPep277 treated patients where noted as opposed to placebo treated patients. The phase III study has began more than 2 years ago in 40 medical centers worldwide, and thus far recruited over 350 patients around the world. If DiaPep277 will prove to be efficacious, it will cause a paradigm shift in the treatment of type 1 diabetes, from treating the subsequent insulin deficiency to addressing the initial autoimmune process that is at the heart of the disease.

  9. A Design Report of the Baseline for PEP-X: an Ultra-Low Emittance Storage Ring

    Energy Technology Data Exchange (ETDEWEB)

    Bane, Karl; Bertsche, Kirk; Cai, Yunhai; Chao, Alex; Corbett, Willian; Fox, John; Hettel, Robert; Huang, Xiaobiao; Huang, Zhirong; Ng, Cho-Kuen; Nosochkov, Yuri; Novokhatski, Sasha; Radedeau, Thomas; Raubenheimer, Tor; Rivetta, Claudio; Safranek, James; Seeman, John; Stohr, Joachim; Stupakov, Gennady; Wang, Lanfa; Wang, Min-Huey; /SLAC

    2010-06-02

    Over the past year, we have worked out a baseline design for PEP-X, as an ultra-low emittance storage ring that could reside in the existing 2.2-km PEPII tunnel. The design features a hybrid lattice with double bend achromat (DBA) cells in two arcs and theoretical minimum emittance (TME) cells in the remaining four arcs. Damping wigglers are used to reduce the horizontal emittance to 86 pm-rad at zero current for a 4.5 GeV electron beam. At a design current of 1.5 A, the horizontal emittance increases, due to intrabeam scattering, to 164 pm-rad when the vertical emittance is maintained at a diffraction limited 8 pm-rad. The baseline design will produce photon beams achieving a brightness of 10{sup 22} (ph/s/mm{sup 2}/mrad{sup 2}/0.1% BW) at 10 keV in a 3.5-m conventional planar undulator. Our study shows that an optimized lattice has adequate dynamic aperture, while accommodating a conventional off-axis injection system. In this report, we present the results of study, including the lattice properties, nonlinear dynamics, intra-beam scattering and Touschek lifetime, RF system, and collective instabilities. Finally, we discuss the possibility of partial lasing at soft X-ray wavelengths using a long undulator in a straight section.

  10. Herencia de la resistencia al virus del mosaico deformante del pimentón PepDMV en Capsicum

    Directory of Open Access Journals (Sweden)

    Pardey Rodríguez Catherine

    2009-12-01

    Full Text Available En busca de determinar el modo de herencia de la resistencia en tres materiales resistentes, se hicieron cruzamientos hacia tres líneas susceptibles. Se siguió el método del retrocruzamiento propuesto por Warner (1952 fundamentado en el modelo matemático de Fisher Immer y Tedin (1932 descrito con detalle por Mater (1949 y Jenkins (1982, 1984 en el cual se descompone la varianza genética en tres componentes: aditiva, dominancia y epistática. El modelo del retrocruzamiento incluye los dos parentales, el hibrido de la primera generación y la autofecunfación de la F1 para formar la población F2 y las retrocruzas hacia ambos padres. Las poblaciones fueron evaluadas a resistencia al virus del mosaico del pimentón PepDMV en condiciones de invernadero. Los resultados mostraron que el modelo aditivodominancia explicó la resistencia en los híbridos formados entre materiales resistentes y susceptibles. Los genes con acción heredable transmiten a la descendencia el efecto de resistencia. La ganancia de la resistencia viral se da por la presencia de parentales resistentes.

  11. Herencia de la resistencia al virus del mosaico deformante del pimentón PepDMV en Capsicum

    Directory of Open Access Journals (Sweden)

    Mario Augusto García Dávila

    2009-10-01

    Full Text Available En busca de determinar el modo de herencia de la resistencia en tres materiales resistentes, se hicieron cruzamientos hacia tres líneas susceptibles. Se siguió el método del retrocruzamiento propuesto por Warner (1952 fundamentado en el modelo matemático de Fisher Immer y Tedin (1932 descrito con detalle por Mater (1949 y Jenkins (1982, 1984 en el cual se descompone la varianza genética en tres componentes: aditiva, dominancia y epistática. El modelo del retrocruzamiento incluye los dos parentales, el hibrido de la primera generación y la autofecunfación de la F1 para formar la población F2 y las retrocruzas hacia ambos padres. Las poblaciones fueron evaluadas a resistencia al virus del mosaico del pimentón PepDMV en condiciones de invernadero. Los resultados mostraron que el modelo aditivodominancia explicó la resistencia en los híbridos formados entre materiales resistentes y susceptibles. Los genes con acción heredable transmiten a la descendencia el efecto de resistencia. La ganancia de la resistencia viral se da por la presencia de parentales resistentes.

  12. The Herschel-PEP survey: evidence for downsizing in the hosts of dusty star-forming systems

    CERN Document Server

    Magliocchetti, M; Rosario, D; Lutz, D; Aussel, H; Berta, S; Altieri, B; Andreani, P; Cepa, J; Castaneda, H; Cimatti, A; Elbaz, D; Genzel, R; Grazian, A; Gruppioni, C; Ilbert, O; Floc'h, E Le; Magnelli, B; Maiolino, R; Nordon, R; Poglitsch, A; Pozzi, F; Riguccini, L; Rodighiero, G; Sanchez-Portal, M; Santini, P; Schreiber, N M Forster; Sturm, E; Tacconi, L; Valtchanov, I

    2013-01-01

    By making use of Herschel-PEP observations of the COSMOS and Extended Groth Strip fields, we have estimated the dependence of the clustering properties of FIR-selected sources on their 100um fluxes. Our analysis shows a tendency for the clustering strength to decrease with limiting fluxes: r0(S100um >8 mJy)~4.3 Mpc and r0(S100um >5 mJy)~5.8 Mpc. These values convert into minimum halo masses Mmin~10^{11.6} Msun for sources brighter than 8 mJy and Mmin~10^{12.4} Msun for S100um > 5 mJy galaxies. We show such an increase of the clustering strength to be due to an intervening population of z~2 sources, which are very strongly clustered and whose relative contribution, equal to about 10% of the total counts at S100um > 2 mJy, rapidly decreases for brighter flux cuts. By removing such a contribution, we find that z ~100 Msun/yr). Our analysis shows that the same amount of (intense) star forming activity takes place in extremely different environments at the different cosmological epochs. For z<~1 the hosts of su...

  13. Klystron Linearizer for Use with 1.2 MW 476 MHz Klystrons in PEP-II RF Systems

    CERN Document Server

    Fox, John; Mastorides, Themis; Teytelman, Dmitry; Van Winkle, Daniel; Zhou, Yubo

    2005-01-01

    The direct and comb loop feedback around the RF cavities in PEP-II is critical in reducing longitudinal instabilities driven by the cavity impedance, and the non-linear 1 MW klystron is in the signal path for these feedback loops. As a result, the effective small-signal gain of the klystron at 85% saturation reduces the impedance control by factors of 5 to 20 as compared to a linear power amplifier. A klystron linearizer circuit has been developed which operates in series with the power amplifier and acts to equalize the small and large signal gains through the combination. The technique must implement a 1 MHz linear control bandwidth over roughly 15 dB of RF signal level variation. The dynamics of this system is operating point dependent, and the channel must have dynamic gain compensation to keep the linearity compensation loop stable over changes in operating point. The design of this non-linear signal processing channel (incorporating RF and DSP techniques) and measured results from full-power klystron te...

  14. 修订报告%Revision of Chinese Version of Psycho-Educational Profile (C-PEP)

    Institute of Scientific and Technical Information of China (English)

    孙敦科; 魏华忠; 于松梅; 袁茵; 杨晓玲; 贾美香; 阎玲

    2000-01-01

    目的:本文对引进的心理教育量表(psycho-educational profile,简称PEP)进行修订.方法:研究对象患儿组来自北京大学精神卫生研究所儿科门诊孤独症儿童78人,正常对照组取自一般幼儿园3-6岁儿童120名.对所有资料进行信度、效度及项目分析.结果:信度和效度均佳.项目难度适中.病理学项目能有效地鉴别患儿的病理性反应.正常功能发展项目分数与年龄相关,与图片词汇测验、瑞文推理测验高度相关.结论:修订后的PEP量表适用于我国孤独症及相关疾病儿童的评估.

  15. Evaluation of a peer-led self-management education programme PEP Talk: Diabetes, Healthy Feet and You.

    Science.gov (United States)

    Woodbury, M Gail; Botros, Mariam; Kuhnke, Janet L; Greene, Julie

    2013-12-01

    PEP (Peer Education Programme) Talk: Diabetes, Healthy Feet and You is a peer-led self-management programme developed to address the problems of growing prevalence of diabetes and its complications, and limited health care dollars. An evaluation of the programme, how it might be situated within a public health perspective and potential bridges for its implementation in communities throughout Canada and worldwide, are presented. The programme consisted of workshops that were conducted by volunteer peer leaders and health care professionals in 12 communities in 10 Canadian provinces; the volunteers were supported through monthly mentoring teleconferences, on-line tips and discussion board conversations. A web portal was developed to be used by the team, volunteers and community participants. Workshop curriculum was developed based on diabetes footcare and self-management best practise guidelines. Community participants answered pre-and post-workshop statements that indicated that learning occurred, as indicated by an increase in the number of statements answered correctly. Participants' feedback about the workshops was positive. In telephone follow-up interviews, 97% of respondents reported having changed their foot self-management behaviours. The portal was commonly used according to website visits, but not as much as expected for registration of community participants. It is recommended that this programme be made widely available and tailored to the specific needs of the communities and that further evaluation be conducted.

  16. PepFect 14, a novel cell-penetrating peptide for oligonucleotide delivery in solution and as solid formulation.

    Science.gov (United States)

    Ezzat, Kariem; Andaloussi, Samir E L; Zaghloul, Eman M; Lehto, Taavi; Lindberg, Staffan; Moreno, Pedro M D; Viola, Joana R; Magdy, Tarek; Abdo, Rania; Guterstam, Peter; Sillard, Rannar; Hammond, Suzan M; Wood, Matthew J A; Arzumanov, Andrey A; Gait, Michael J; Smith, C I Edvard; Hällbrink, Mattias; Langel, Ülo

    2011-07-01

    Numerous human genetic diseases are caused by mutations that give rise to aberrant alternative splicing. Recently, several of these debilitating disorders have been shown to be amenable for splice-correcting oligonucleotides (SCOs) that modify splicing patterns and restore the phenotype in experimental models. However, translational approaches are required to transform SCOs into usable drug products. In this study, we present a new cell-penetrating peptide, PepFect14 (PF14), which efficiently delivers SCOs to different cell models including HeLa pLuc705 and mdx mouse myotubes; a cell culture model of Duchenne's muscular dystrophy (DMD). Non-covalent PF14-SCO nanocomplexes induce splice-correction at rates higher than the commercially available lipid-based vector Lipofectamine 2000 (LF2000) and remain active in the presence of serum. Furthermore, we demonstrate the feasibility of incorporating this delivery system into solid formulations that could be suitable for several therapeutic applications. Solid dispersion technique is utilized and the formed solid formulations are as active as the freshly prepared nanocomplexes in solution even when stored at an elevated temperatures for several weeks. In contrast, LF2000 drastically loses activity after being subjected to same procedure. This shows that using PF14 is a very promising translational approach for the delivery of SCOs in different pharmaceutical forms.

  17. Ba{anti B}ar status report on the design of a detector for the study of CP violation at PEP-II at SLAC

    Energy Technology Data Exchange (ETDEWEB)

    1993-06-01

    Experiments designed to measure CP-violating asymmetries in the B meson system must emphasize exclusive state reconstruction with the highest possible resolution and efficiency. In the case of B{sup 0} mesons produced in pairs at the {Upsilon}(4S) resonance at an asymmetric e{sup +}e{sup {minus}} storage ring, this capability must be accompanied by precise vertex reconstruction in the direction of the e{sup +}e{sup {minus}} beams (henceforth the z direction). These are difficult requirements, beyond the scope of any existing storage ring detector. The challenge of designing an asymmetric storage ring capable of producing the large number of neutral B meson pairs required to measure CP-violating asymmetries in decays to CP eigenstates has been handsomely met in the PEP-II design. As the first asymmetric e{sup +}e{sup {minus}} storage ring, PEP-II presents a novel set of experimental challenges to a 4{pi} detector. This Status Report describes the design of a new detector fully capable of exploiting the physics opportunities provided by PEP-II.

  18. A stochastic estimate of ground motion at Oceano, California, for the M 6.5 22 December 2003 San Simeon earthquake, derived from aftershock recordings

    Science.gov (United States)

    Di, Alessandro C.; Boatwright, J.

    2006-01-01

    The U.S. Geological Survey deployed a digital seismic station in Oceano, California, in February 2004, to investigate the cause of damage and liquefaction from the 22 December 2003 M 6.5 San Simeon earthquake. This station recorded 11 M > 2.8 aftershocks in almost 8 weeks. We analyze these recordings, together with recordings of the mainshock and the same aftershocks obtained from nearby stations in Park Hill and San Luis Obispo, to estimate the mainshock ground motion in Oceano. We estimate the Fourier amplitude spectrum using generalized spectral ratio analysis. We test a set of aftershocks as Green's functions by comparing simulated and recorded acceleration amplitude spectra for the mainshock at San Luis Obispo and Park Hill. We convolve the aftershock accelerograms with a stochastic operator to simulate the duration and phase of the mainshock accelerograms. This approximation allows us to extend the range of aftershocks that can be used as Green's functions to events nearly three magnitude units smaller than the mainshock. Our realizations for the mainshock accelerogram at Oceano yield peak ground accelerations distributed as 28% ?? 4%g. We interpret these realizations as upper bounds for the actual ground motion, because our analysis assumes a linear response, whereas the presence of liquefaction indicates that the ground behaved nonlinearly in Oceano.

  19. Synthesis and Characterization of Cu(II Substituted Hexa Tungstate and Molybdate of the Anderson Type Anion [Xn+M6O24]-(12-n

    Directory of Open Access Journals (Sweden)

    K. C. Dey

    2008-01-01

    Full Text Available Sodium salts of copper substituted heteropoly compounds having molecular formula Na10[CuIIWVI6O24].22H2O(1 and Na10[CuIIMoVI6O24]. 19H2O(2 analogous to the Anderson type anion [Xn+M6O24]─(12-n were synthesized according to the literature method. Compound(1 was synthesized from aqueous acidic solution containing sodium tungstate and copper chloride and compound(2 from sodium molybdate and copper chloride solution. The elemental analyses show 1:6 atomic ratio of the heteroatom to the addenda in both the compounds. The IR spectra for both the compounds are in good agreement with the reported formulae. A small deviation in IR spectra are observed than that established for Keggin anions. CuO6 acts as hetero group which replaces MO6 (M=W or Mo from the Anderson structure. The thermal analyses of the compounds show the loss of the peripheral water molecules. The molecular weight of the compound (1 and (2 have been found as 2212.5 and 1600.5 respectively.

  20. Building Damage Assessment Using Multisensor Dual-Polarized Synthetic Aperture Radar Data for the 2016 M 6.2 Amatrice Earthquake, Italy

    Directory of Open Access Journals (Sweden)

    Sadra Karimzadeh

    2017-03-01

    Full Text Available On 24 August 2016, the M 6.2 Amatrice earthquake struck central Italy, well-known as a seismically active region, causing considerable damage to buildings in the town of Amatrice and the surrounding area. Damage from this earthquake was assessed quantitatively by means of multitemporal synthetic aperture radar (SAR coherence and SAR intensity methods using dual-polarized SAR data obtained from the Sentinel-1 (VV, VH and ALOS-2 (HH, HV satellites. We developed linear discriminant functions based on three items: (1 the differential coherence values; (2 the differential backscattering intensity values of pre- and post-event images; and (3 a binary damage map of the optical pre- and post-event imagery. The accuracy of the proposed model was 84% for the Sentinel-1 data and 76% for the ALOS-2 data. The damage proxy maps deduced from the linear discriminant functions can be useful in the parcel-by-parcel assessment of building damage and development of spatial models for the allocation of urban search and rescue operations.

  1. Total electron content variations over southern Europe before and during the M 6.3 Abruzzo earthquake of April 6, 2009

    Directory of Open Access Journals (Sweden)

    Spyrous D. Spatalas

    2012-04-01

    Full Text Available

    Total electron content (TEC data of 14 global positioning system (GPS stations of the EUREF network were provided by the IONOLAB. These were analyzed using wavelet analysis and discrete Fourier analysis to investigate the TEC variations over southern Europe in the month before the catastrophic Abruzzo earthquake of M 6.3 of April 6, 2009. The main conclusions of this analysis are: (a TEC oscillations in a broad range of frequencies occurred randomly over a broad area of several hundred kilometers from the earthquake; (b Morning and evening extensions of the day-time TEC values were seen for all of the EUREF stations of this program shortly before, during and shortly after the main earthquake period; (c High frequency oscillations (f $ 0.0003 Hz, period T $ 60 m appear to indicate the location of the earthquake, although with questionable accuracy, while the fractal characteristics of the frequency distribution indicates the locus of the earthquake with relatively greater accuracy. We conclude that the lithosphere-atmosphere-ionosphere coupling mechanism through acoustic or gravity waves might explain this phenomenology.

  2. Afterslip-dominated surface rupture in the M6.0 South Napa Earthquake as constrained by structure-from-motion analysis and terrestrial laser scanning

    Science.gov (United States)

    DeLong, S. B.; Pickering, A.; Scharer, K. M.; Hudnut, K. W.; Lienkaemper, J. J.

    2014-12-01

    Near-fault surface deformation associated with the August 24, 2014 M6.0 South Napa earthquake included both coseismic and post-seismic slip. Initial synthesis of field observations and initial measurement and modeling of afterslip from traditional survey methods indicate that coseismic slip was minimal (Road, on discontinuous left-stepping en echelon ruptures. By August 26, the surface rupture became nearly continuous, and cultural features extracted from the TLS point clouds indicate horizontal slip magnitudes between 15 and 27 cm, increasing northward. By September 22, slip magnitudes had increased to between 26 and 46 cm. The lower slip magnitudes are to the south at Withers Road, and the general trend is increased slip to the north, but there is more slip variability along the fault trace in the September 15 data. From August 26 to September 15, the west side of the fault trace uplifted between 0.5 and 5 cm relative to east side. Increased relief on the surface rupture itself indicated a slight compressional component of the deformation. These results confirm that post-event air photos can be useful for rapid 3D mapping, and that the unparalleled accuracy of TLS data can be used to quantify even very subtle deformation patterns in three dimensions and document changes through time.

  3. Factors invovled in L. paracasei subp. paracasei M5-L inhibition of the Shigella sonnei adhesion%副干酪乳杆菌M5-L抑制宋内志贺氏菌黏附作用影响因素的研究

    Institute of Scientific and Technical Information of China (English)

    张英春; 马微; 易华西; 张兰威

    2012-01-01

    研究副干酪乳杆菌M5-L抑制宋内志贺氏菌(S.sonnei)对HT-29细胞黏附的作用及其影响抑制黏附作用的表面分子分析。结果表明M5-L能够显著的抑制S.sonnei的黏附作用,在排除、竞争和取代黏附实验中,抑制率分别为55%、33%和30%,差异显著(p〈0.05),高碘酸钠处理后,M5-L的抑制黏附作用没有变化,表明碳水化合物并没有参与到黏附抑制过程中。而经过5mol/LLiCl处理后,M5-L的抑制黏附作用下降,说明S-层蛋白参与了M5-L抑制S.sonnei对HT-29细胞的黏附作用。此外,M5-L的S-层蛋白能够显著抑制S.sonnei的黏附作用。%L.paracasei subp. paracasei M5-L inhibition of Shigella sonnei adhesion to HT-29 cells and the type of molecules in the M5-L cells surface which effecting the inhibition of S.sonnei were investigated. In exclusion, competition and displacement assays, L.paracasei subp. paracasei M5-L exhibited significant inhibitory activity (p〈0.05),preventing 55% ,33% and 30% of the S.sonnei cells from adhering to HT-29 cell respectively. Treatment with metaperiodate on the M5-L did not affect the inhibitory activity,which showed that the carbohydrates did not involved in the inhibition adherence. When the M5-L treated with 5mol/L LiCI,the inhibition activity was decreased significantly,which indicated the S-layer protein was the important molecules in the inhibition activity. In addition,the S-layer proteins exhibited strongly inhibitory effects on the S.sonnei adherence to HT-29 ceils.

  4. Estimating the probability of occurrence of earthquakes (M>6) in the Western part of the Corinth rift using fault-based and classical seismotectonic approaches.

    Science.gov (United States)

    Boiselet, Aurelien; Scotti, Oona; Lyon-Caen, Hélène

    2014-05-01

    -SISCOR Working Group. On the basis of this consensual logic tree, median probability of occurrences of M>=6 events were computed for the region of study. Time-dependent models (Brownian Passage time and Weibull probability distributions) were also explored. The probability of a M>=6.0 event is found to be greater in the western region compared to the eastern part of the Corinth rift, whether a fault-based or a classical seismotectonic approach is used. Percentile probability estimates are also provided to represent the range of uncertainties in the results. The percentile results show that, in general, probability estimates following the classical approach (based on the definition of seismotectonic source zones), cover the median values estimated following the fault-based approach. On the contrary, the fault-based approach in this region is still affected by a high degree of uncertainty, because of the poor constraints on the 3D geometries of the faults and the high uncertainties in their slip rates.

  5. Fluid‐driven seismicity response of the Rinconada fault near Paso Robles, California, to the 2003 M 6.5 San Simeon earthquake

    Science.gov (United States)

    Hardebeck, Jeanne L.

    2012-01-01

    The 2003 M 6.5 San Simeon, California, earthquake caused significant damage in the city of Paso Robles and a persistent cluster of aftershocks close to Paso Robles near the Rinconada fault. Given the importance of secondary aftershock triggering in sequences of large events, a concern is whether this cluster of events could trigger another damaging earthquake near Paso Robles. An epidemic‐type aftershock sequence (ETAS) model is fit to the Rinconada seismicity, and multiple realizations indicate a 0.36% probability of at least one M≥6.0 earthquake during the next 30 years. However, this probability estimate is only as good as the projection into the future of the ETAS model. There is evidence that the seismicity may be influenced by fluid pressure changes, which cannot be forecasted using ETAS. The strongest evidence for fluids is the delay between the San Simeon mainshock and a high rate of seismicity in mid to late 2004. This delay can be explained as having been caused by a pore pressure decrease due to an undrained response to the coseismic dilatation, followed by increased pore pressure during the return to equilibrium. Seismicity migration along the fault also suggests fluid involvement, although the migration is too slow to be consistent with pore pressure diffusion. All other evidence, including focal mechanisms and b‐value, is consistent with tectonic earthquakes. This suggests a model where the role of fluid pressure changes is limited to the first seven months, while the fluid pressure equilibrates. The ETAS modeling adequately fits the events after July 2004 when the pore pressure stabilizes. The ETAS models imply that while the probability of a damaging earthquake on the Rinconada fault has approximately doubled due to the San Simeon earthquake, the absolute probability remains low.

  6. Surface deformation due to the M6.5 Lefkada earthquake (17 November 2015) exploiting SENTINEL-1 and GNSS observations. Implications for seismic hazard.

    Science.gov (United States)

    Elias, Panagiotis; Ganas, Athanassios; Briole, Pierre; Parcharidis, Isaak; Avallone, Antonio; Roukounakis, Nikos; Argyrakis, Panagiotis; Roger, Marine; Cheloni, Daniele; Tolomei, Cristiano; Mendonidis, Evangelos; Moraitini, Evelyn; Papanikolaou, Marios; Papastergios, Asterios

    2017-04-01

    The 17 November 2015 M=6.5 Lefkada earthquake in the Ionian sea, Greece, produced tens of centimetres of co-seismic motion in both Lefkada and Cephalonia islands. We present the full picture of the co-seismic displacements as mapped by space geodetic techniques, Sentinel 1A INSAR and permanent GNSS stations. We use this data together with the constraints from seismology to invert for fault localisation , size and slip distribution. We observed post-seismic displacements throughout most of southern Lefkada and northern Cephalonia islands recorded at the two NOA GNSS stations of PONT and SPAN and four additional permanent and six campaign GNSS stations established after the earthquake. Those displacements range from a few centimetres near the epicentre to a few millimetres far from the fault. We model the post-seismic displacements as due to uniform slip on the same fault plane that ruptured during the main event. The model shows a right-lateral afterslip along the fault but with slightly larger extension in comparison to the co-seismic slip, less shallow and deeper. This transient strain followed the main event during a short period of 80 days as modelled with an exponential law. Currently, the post-seismic deformation is being investigated by exploiting multi-temporal Sentinel 1A/B InSAR processed among others with ESA's Geohazards Exploitation Platform and SNAP software. The first challenging issue is the coherence which is not high in the area due to the vegetation cover. The second one is the correction of the tropospheric component. We estimate it using the tropospheric delay at the permanent GNSS stations and by using an meteorological model based on the WRF refined at the spatial resolution of 1 km. The earthquakes occurred in the Central Ionian area since 1983, studied both by seismology and space geodesy imply a seismic gap offshore NW Cephalonia that needs to be monitored.

  7. Formation and Eruption of a Flux Rope from the Sigmoid Active Region NOAA 11719 and Associated M6.5 Flare: A Multi-wavelength Study

    Science.gov (United States)

    Joshi, Bhuwan; Kushwaha, Upendra; Veronig, Astrid M.; Dhara, Sajal Kumar; Shanmugaraju, A.; Moon, Yong-Jae

    2017-01-01

    We investigate the formation, activation, and eruption of a flux rope (FR) from the sigmoid active region NOAA 11719 by analyzing E(UV), X-ray, and radio measurements. During the pre-eruption period of ∼7 hr, the AIA 94 Å images reveal the emergence of a coronal sigmoid through the interaction between two J-shaped bundles of loops, which proceeds with multiple episodes of coronal loop brightenings and significant variations in the magnetic flux through the photosphere. These observations imply that repetitive magnetic reconnections likely play a key role in the formation of the sigmoidal FR in the corona and also contribute toward sustaining the temperature of the FR higher than that of the ambient coronal structures. Notably, the formation of the sigmoid is associated with the fast morphological evolution of an S-shaped filament channel in the chromosphere. The sigmoid activates toward eruption with the ascent of a large FR in the corona, which is preceded by the decrease in photospheric magnetic flux through the core flaring region, suggesting tether-cutting reconnection as a possible triggering mechanism. The FR eruption results in a two-ribbon M6.5 flare with a prolonged rise phase of ∼21 minutes. The flare exhibits significant deviation from the standard flare model in the early rise phase, during which a pair of J-shaped flare ribbons form and apparently exhibit converging motions parallel to the polarity inversion line, which is further confirmed by the motions of hard X-ray footpoint sources. In the later stages, the flare follows the standard flare model and the source region undergoes a complete sigmoid-to-arcade transformation.

  8. Numerical Shake Prediction for Earthquake Early Warning: More Precise and Rapid Prediction even for Deviated Distribution of Ground Shaking of M6-class Earthquakes

    Science.gov (United States)

    Hoshiba, M.; Ogiso, M.

    2015-12-01

    In many methods of the present EEW systems, hypocenter and magnitude are determined quickly, and then the strengths of ground motions are predicted using the hypocentral distance and magnitude based on a ground motion prediction equation (GMPE), which usually leads the prediction of concentric distribution. However, actual ground shaking is not always concentric, even when site amplification is corrected. At a common site, the strengths of shaking may be much different among earthquakes even when their hypocentral distances and magnitudes are almost the same. For some cases, PGA differs more than 10 times, which leads to imprecise prediction in EEW. Recently, Numerical Shake Prediction method was proposed (Hoshiba and Aoki, 2015), in which the present ongoing wavefield of ground shaking is estimated using data assimilation technique, and then future wavefield is predicted based on physics of wave propagation. Information of hypocentral location and magnitude is not required in this method. Because future is predicted from the present condition, it is possible to address the issue of the non-concentric distribution. Once the deviated distribution is actually observed in ongoing wavefield, future distribution is predicted accordingly to be non-concentric. We will indicate examples of M6-class earthquakes occurred at central Japan, in which strengths of shaking were observed to non-concentrically distribute. We will show their predictions using Numerical Shake Prediction method. The deviated distribution may be explained by inhomogeneous distribution of attenuation. Even without attenuation structure, it is possible to address the issue of non-concentric distribution to some extent once the deviated distribution is actually observed in ongoing wavefield. If attenuation structure is introduced, we can predict it before actual observation. The information of attenuation structure leads to more precise and rapid prediction in Numerical Shake Prediction method for EEW.

  9. Dosimetric and radiobiological comparison of CyberKnife M6TM InCise multileaf collimator over IRISTM variable collimator in prostate stereotactic body radiation therapy

    Directory of Open Access Journals (Sweden)

    Vindu Kathriarachchi

    2016-01-01

    Full Text Available The impetus behind our study was to establish a quantitative comparison between the IRIS collimator and the InCise multileaf collimator (MLC (Accuray Inc. Synnyvale, CA for prostate stereotactic body radiation therapy (SBRT. Treatment plans for ten prostate cancer patients were performed on MultiPlan™ 5.1.2 treatment planning system utilizing MLC and IRIS for 36.25 Gy in five fractions. To reduce the magnitude of variations between cases, the planning tumor volume (PTV was defined and outlined for treating prostate gland only, assuming no seminal vesicle or ex-capsule involvement. Evaluation indices of each plan include PTV coverage, conformity index (CI, Paddick's new CI, homogeneity index, and gradient index. Organ at risk (OAR dose sparing was analyzed by the bladder wall Dmaxand V37Gy, rectum Dmaxand V36Gy. The radiobiological response was evaluated by tumor control probability and normal tissue complication probability based on equivalent uniform dose. The dose delivery efficiency was evaluated on the basis of planned monitor units (MUs and the reported treatment time per fraction. Statistical significance was tested using the Wilcoxon signed rank test. The studies indicated that CyberKnife M6™ IRIS and InCise™ MLC produce equivalent SBRT prostate treatment plans in terms of dosimetry, radiobiology, and OAR sparing, except that the MLC plans offer improvement of the dose fall-off gradient by 29% over IRIS. The main advantage of replacing the IRIS collimator with MLC is the improved efficiency, determined from the reduction of MUs by 42%, and a 36% faster delivery time.

  10. A Teachable Moment in Earth Deformation: An Undergraduate Strain Module Incorporating GPS Measurement of the August 24, 2014 M6.0 South Napa Earthquake

    Science.gov (United States)

    Resor, P. G.; Cronin, V. S.; Hammond, W. C.; Pratt-Sitaula, B.; Olds, S. E.

    2014-12-01

    The August 24, 2014 M 6.0 South Napa Earthquake was the largest earthquake to occur in the San Francisco Bay Area, home to more than 7 million people, in almost 25 years. The event occurred within an area of dense GPS instrumentation including continuous stations from the EarthScope Plate Boundary Observatory, Bay Area Regional Deformation Network and other networks. Coseismic displacements of up to 3 cm were rapidly estimated within one day after the event, providing a map of Earth shape change at over one hundred stations around the epicenter. The earthquake thus presets as an excellent "teachable moment" to introduce students to basic geoscience concepts, modern geophysical methods, and the state of knowledge in earthquake science. We have developed an example exercise that uses GPS-derived interseismic velocities and coseismic offsets to explore deformation in the vicinity of the earthquake rupture. This exercise builds on the UNAVCO education resource "Infinitesimal Strain Analysis Using GPS Data" (http://www.unavco.org/education/resources/educational-resources/lesson/majors-gps-strain/majors-gps-strain.html), a module designed to introduce undergraduate geoscience majors to concepts of crustal deformation using GPS velocity data. In the module students build their intuition about infinitesimal strain through manipulation of physical models, apply this intuition to interpret maps of GPS velocity vectors, and ultimately calculate the instantaneous deformation rate of triangles on the Earth's surface defined by three GPS sites. The South Napa data sets provide an example with clear societal relevance that can be used to explore the basic concepts of deformation, but may also be extended to explore topics such as strain accumulation, release, and transfer associated with the earthquake cycle. The UNAVCO module could be similarly extended to create additional exercises in response to future events with clear geodetic signals.

  11. A Stochastic Estimate of Ground Motion at Oceano, California, for the M6.5 December 22, 2003, San Simeon Earthquake, Derived from Aftershock Recordings

    Science.gov (United States)

    di Alessandro, C.; Boatwright, J.

    2004-12-01

    The U.S. Geological Survey deployed a digital seismic station in Oceano, California, in February 2004, to investigate the cause of damage and liquefaction from the 22 December 2003 M6.5 San Simeon earthquake. This station recorded 11 M\\> 2.8 aftershocks in almost eight weeks. We use these recordings, together with recordings of the main shock and the same aftershocks obtained from nearby stations in Park Hill and San Luis Obispo, to estimate the mainshock ground motion in Oceano. We estimate the Fourier amplitude spectrum using a generalized spectral ratio analysis that averages the spectral ratios from both stations for all the co-recorded aftershocks. We test three aftershocks as Green's functions by comparing simulated and recorded acceleration amplitude spectra for the main shock at Park Hill and San Luis Obispo. Instead of deconvolving the aftershock recordings from the mainshock recordings to estimate a source-time function, we convolve the aftershock accelerograms with a stochastic operator to simulate the duration and phase of the mainshock accelerograms. These stochastic operators are determined as sets of delta functions whose delays are randomly generated from a gamma distribution with a shape parameter of 1. We choose the scale parameter by fitting Husid plots of the Park Hill and San Luis Obsipo mainshock accelerograms. This stochastic approach allows us to extend the range of aftershocks that can be used as Green's functions to events nearly three magnitude units smaller than the main shock. Our realizations for the mainshock accelerogram at Oceano yield PGAs distributed as 28±4% g. We interpret these realizations as upper bounds for the actual ground motion because our analysis assumes that the ground behaved linearly, while the liquefaction and lateral spreading indicates that the ground behaved non-linearly. Geotechnical analysis of the site indicates that a PGA of 25% g would have initiated the liquefaction.

  12. LARGE-SCALE CONTRACTION AND SUBSEQUENT DISRUPTION OF CORONAL LOOPS DURING VARIOUS PHASES OF THE M6.2 FLARE ASSOCIATED WITH THE CONFINED FLUX ROPE ERUPTION

    Energy Technology Data Exchange (ETDEWEB)

    Kushwaha, Upendra [Udaipur Solar Observatory, Physical Research Laboratory, Udaipur 313001 (India); Joshi, Bhuwan; Moon, Yong-Jae [School of Space Research, Kyung Hee University, Yongin, Gyeonggi-Do, 446-701 (Korea, Republic of); Veronig, Astrid M. [Kanzelhöhe Observatory/Institute of Physics, University of Graz, Universitätsplatz 5, A-8010 Graz (Austria)

    2015-07-01

    We investigate evolutionary phases of an M6.2 flare and the associated confined eruption of a prominence. The pre-flare phase exhibits spectacular large-scale contraction of overlying extreme ultraviolet (EUV) coronal loops during which the loop system was subjected to an altitude decrease of ∼20 Mm (40% of the initial height) for an extended span of ∼30 minutes. This contraction phase is accompanied by sequential EUV brightenings associated with hard X-ray (HXR; up to 25 keV) and microwave (MW) sources from low-lying loops in the core region which together with X-ray spectra indicate strong localized heating in the source region before the filament activation. With the onset of the flare’s impulsive phase, we detect HXR and MW sources that exhibit intricate temporal and spatial evolution in relation to the fast rise of the prominence. Following the flare maximum, the filament eruption slowed down and subsequently became confined within the large overlying active region loops. During the confinement process of the erupting prominence, we detect MW emission from the extended coronal region with multiple emission centroids, which likely represent emission from hot blobs of plasma formed after the collapse of the expanding flux rope and entailing prominence material. RHESSI spectroscopy reveals high plasma temperature (∼30 MK) and substantial non-thermal characteristics (δ ∼ 5) during the impulsive phase of the flare. The time evolution of thermal energy exhibits a good correspondence with the variations in cumulative non-thermal energy, which suggests that the energy of accelerated particles is efficiently converted to hot flare plasma, implying an effective validation of the Neupert effect.

  13. The flavoprotein Mcap0476 (RlmFO) catalyzes m5U1939 modification in Mycoplasma capricolum 23S rRNA

    DEFF Research Database (Denmark)

    Lartigue, Carole; Lebaudy, Anne; Blanchard, Alain;

    2014-01-01

    Efficient protein synthesis in all organisms requires the post-transcriptional methylation of specific ribosomal ribonucleic acid (rRNA) and transfer RNA (tRNA) nucleotides. The methylation reactions are almost invariably catalyzed by enzymes that use S-adenosylmethionine (AdoMet) as the methyl...... group donor. One noteworthy exception is seen in some bacteria, where the conserved tRNA methylation at m5U54 is added by the enzyme TrmFO using flavin adenine dinucleotide together with N5,N10-methylenetetrahydrofolate as the one-carbon donor. The minimalist bacterium Mycoplasma capricolum possesses...... two homologs of trmFO, but surprisingly lacks the m5U54 tRNA modification. We created single and dual deletions of the trmFO homologs using a novel synthetic biology approach. Subsequent analysis of the M. capricolum RNAs by mass spectrometry shows that the TrmFO homolog encoded by Mcap0476...

  14. Evaluating the ability of artificial neural network and PCA-M5P models in predicting leachate COD load in landfills.

    Science.gov (United States)

    Azadi, Sama; Amiri, Hamid; Rakhshandehroo, G Reza

    2016-09-01

    Waste burial in uncontrolled landfills can cause serious environmental damages and unpleasant consequences. Leachates produced in landfills have the potential to contaminate soil and groundwater resources. Leachate management is one of the major issues with respect to landfills environmental impacts. Improper design of landfills can lead to leachate spread in the environment, and hence, engineered landfills are required to have leachate monitoring programs. The high cost of such programs may be greatly reduced and cost efficiency of the program may be optimized if one can predict leachate contamination level and foresee management and treatment strategies. The aim of this study is to develop two expert systems consisting of Artificial Neural Network (ANN) and Principal Component Analysis-M5P (PCA-M5P) models to predict Chemical Oxygen Demand (COD) load in leachates produced in lab-scale landfills. Measured data from three landfill lysimeters, including rainfall depth, number of days after waste deposition, thickness of top and bottom Compacted Clay Liners (CCLs), and thickness of top cover over the lysimeter, were utilized to develop, train, validate, and test the expert systems and predict the leachate COD load. Statistical analysis of the prediction results showed that both models possess good prediction ability with a slight superiority for ANN over PCA-M5P. Based on test datasets, the mean absolute percentage error for ANN and PCA-M5P models were 4% and 12%, respectively, and the correlation coefficient for both models was greater than 0.98. Developed models may be used as a rough estimate for leachate COD load prediction in primary landfill designs, where the effect of a top and/or bottom liner is disputed.

  15. Identification, recombinant expression, and characterization of the 100 kDa high molecular weight Hymenoptera venom allergens Api m 5 and Ves v 3.

    Science.gov (United States)

    Blank, Simon; Seismann, Henning; Bockisch, Benjamin; Braren, Ingke; Cifuentes, Liliana; McIntyre, Mareike; Rühl, Dana; Ring, Johannes; Bredehorst, Reinhard; Ollert, Markus W; Grunwald, Thomas; Spillner, Edzard

    2010-05-01

    Insect stings can cause life-threatening IgE-mediated anaphylactic reactions in venom-allergic patients. Although several compounds have already been described as venom allergens, prominent allergen candidates especially in the higher m.w. range have still remained elusive. Tandem mass spectrometry-based sequencing assigned a candidate gene to the most prominent putative high m.w. allergen Api m 5 (allergen C) in honeybee (Apis mellifera) venom and also allowed identification of its homologue Ves v 3 in yellow jacket (Vespula vulgaris) venom. Both proteins exhibit a pronounced sequence identity to human dipeptidyl peptidase IV or CD26. Reactivity of a human IgE mAb verified the presence of these proteins in the venoms. Both proteins were produced in insect cells and characterized for their enzymatic activity as well as their allergenic potential using sera and basophils from insect venom-allergic patients. Both Api m 5 and Ves v 3 were recognized by specific IgE of the majority of patients even in the absence of cross-reactive carbohydrate determinants. Serologic IgE reactivity closely matched activation of human basophils by Api m 5 or Ves v 3, thus underlining their relevance in functional assays. With Api m 5 and Ves v 3, a new pair of homologous allergens becomes available for future clinical applications in diagnosis and therapy that may also contribute to the understanding of molecular mechanisms of insect venoms. Moreover, the patient IgE reactivity together with the cellular activation demonstrates for the first time the relevance of high m.w. allergens in the context of hymenoptera venom allergy.

  16. 布鲁氏菌M5-90疫苗株磷酸葡萄糖变位酶基因(pgm)突变株的构建及免疫评价%Construction and Immune Evaluation on Mutation of phosphoglucomutase gene (pgm) Attenuates of Brucella Melitensis Vaccine M5-90

    Institute of Scientific and Technical Information of China (English)

    李天森; 张辉; 张艳; 孟茹; 张豫; 孙志华; 蒋攀文; 王震; 陈瑞花

    2013-01-01

    In order to obtain a Brucella vaccine candidate which can distinguish between natural infection and attenuated vaccine, this paper studied the phosphoglucomutase gene (pgm) influence on Brucella M5-90 vaccine strain virulence and immune evaluation. The recombinant plasmid pGEM-7zf-Δpgm was constructed, and which was electroporated into Brucella melitensis M5-90 competent cells, screening for Brucella vaccine strain M5-90 pgm gene deletion mutant strains (Δpgm) and to detect the M5-90 Δpgm strain genetic stability, and immunogenicity. The test results showed that the reverse mutation did not occur within 15 passages; the Δpgm antibody content and the parent strain M5-90 group had no significant difference; Δpgm had the ability to produce the IL-2 was stronger than that of M5-90, the ability to produce INF-γ was lower than the M5-90; the rose bengal plate agglutination test and tube agglutination test of this gene deletion strains was not agglutinated; the results of Western blot confirmed that the Δpgm could not induce the mice to produce anti-pgm protein antibody. The Δpgm constructed in this study, had good genetic stability and immunogenicity, provided basic data for the next step to more in-depth develop Brucella gene-deleted vaccine.%为获得可以区分自然感染和疫苗免疫且毒力较弱的布鲁氏菌候选疫苗株,本实验研究了磷酸葡萄糖变位酶基因(pgm)对布鲁氏菌(Brucella melitensis)M5-90疫苗株毒力的影响,并对其进行了免疫评价.本实验构建了重组质粒pGEM-7zf-△pgm,电转化布鲁氏菌M5-90感受态细胞,筛选获得布鲁氏菌疫苗株M5-90的pgm基因缺失株(△pgm),并对获得的M5-90 △pgm株进行遗传稳定性、免疫原性检测.结果显示,△pgm能稳定传15代;△pgm组的抗体含量较亲本株M5-90组差异不显著;△pgm在诱导机体产生IL-2的能力要强于M5-90,产生INF-γ的能力低于M5-90;该基因缺失株采用虎红平板凝集试验和试管凝集

  17. Hydrogen production by Clostridium acetobutylicum ATCC 824 and megaplasmid-deficient mutant M5 evaluated using a large headspace volume technique

    Energy Technology Data Exchange (ETDEWEB)

    Oh, Sang-Eun [Department of Biological Environment, Kangwon National University, Kangwon-do (Korea); Zuo, Yi; Zhang, Husen [Department of Civil and Environmental Engineering, The Pennsylvania State University, University Park, PA 16802 (United States); Guiltinan, Mark J. [Department of Horticulture, The Pennsylvania State University, University Park, PA 16802 (United States); Hydrogen Energy (H2E) Center, The Pennsylvania State University, University Park, PA 16802 (United States); Logan, Bruce E.; Regan, John M. [Department of Civil and Environmental Engineering, The Pennsylvania State University, University Park, PA 16802 (United States); Hydrogen Energy (H2E) Center, The Pennsylvania State University, University Park, PA 16802 (United States)

    2009-12-15

    Biohydrogen production is measured using a variety of techniques, ranging from low cost intermittent gas release methods where yields are usually reduced due to high partial pressures of hydrogen, to expensive respirometers that can eliminate pressure buildup. A new large headspace volume technique was developed that reduces the potential for hydrogen gas inhibition without the need for a respirometer. We tested this method with two strains of clostridia, Clostridium acetobutylicum ATCC 824 and its mutant M5 that lacks a megaplasmid responsible for butanol and acetone production, and a mixed culture (heat-treated sludge). The hydrogen yield using M5 (2.64 mol-H{sub 2}/mol-glucose) was 47% higher than that of the parent strain (1.79 mol-H{sub 2}/mol-glucose), and 118% larger than that obtained in tests with the sludge inoculum (1.21 mol-H{sub 2}/mol-glucose). The increased yield for M5 was primarily due to a decrease in biomass synthesis (38%) compared to the parent strain. Hydrogen yields measured using this new method were on average 14% higher than those obtained using a conventional respirometric method. These findings indicate enhanced biohydrogen production from the megaplasmid-deficient mutant of C. acetobutylicum ATCC 824, and that an intermittent gas-sampling technique can effectively measure high hydrogen gas by using a large headspace volume. (author)

  18. Linear and non-linear optical properties of amorphous Se and M5Se95 (M $=$ Ge, Ga and Zn) films

    Indian Academy of Sciences (India)

    GH ABBADY; K A ALY; Y SADDEEK; N AFIFIY

    2016-12-01

    The variations in structure and optical properties of amorphous a-Se and a-M$_5$Se$_{95}$ (M = Ge, Ga and Zn) films have been studied based on FTIR and optical measurements. FTIR transmittance spectra for a-Se and a-M$_5$Se$_{95}$ (M $=$ Ge, Ga and Zn) glasses were measured as a function of wavenumber. The addition of Ge, Ga and Zn increases the vibrational frequency of the a-Se main band. The absorption edge of Ge$_5$Se$_{95}$ shifted towards long side of the wavelength in comparison with that of a-Se film. This shift increases gradually in the case of Ga$_5$Se$_{95}$ and Zn$_5$Se$_95$ films. So, the optical bandgap ofM5Se95 films was decreased, but the index of refraction was increased. The first and third order of electric susceptibility ($\\chi_{(1)}$ and $\\chi_{(3)}$) and non-linear index of refraction ($n_2$) were increased by adding Ge, Ga and Zn into a-Se.

  19. Tectonic Seasonal Loading Inferred from cGPS Measurements as a Potential Trigger for the M6.0 South Napa Earthquake

    Science.gov (United States)

    Kraner, M.; Holt, W. E.; Borsa, A. A.

    2015-12-01

    Measurements from continuous global positioning system (cGPS) networks continue to unfold details about transient strain signals [Mavrommatis et al., 2014; Heki, 2003]. Linking these transient strain signals to seismic events remains elusive, as it requires detailed information about the steady-state tectonic loading sources, faulting geometries, and strain distribution with depth. Here we use cGPS measurements to uncover a regional strain transient peaking just prior to the M6.0 August 24, 2014 South Napa earthquake. This signal appears to have produced a coulomb stress increase, favoring slip on the West Napa faulting system. Analysis of cGPS time series during the interseismic period from 2006 to 2014 shows a stacked summer dilatational lobe of +142 ± 64 x 10-9 in the 100 km2 earthquake region. The Napa region is part of a broad, long wavelength, zone of positive dilatational strain and coulomb stress increase peaking each summer season. Summer transients are associated with horizontal displacements of 3-5 mm directed eastward toward the Sacramento Basin and of 1-3 mm directed southwest toward the San Francisco Bay and Pacific Ocean. Winter transients involve the opposite of these motions, causing negative dilatational strains and negative coulomb stress changes in the Napa region. We observe a significant increase in summer seismicity rates (greater than 95% confidence for a Chi-square test) within regions of positive coulomb stress change in Northern California. Large scale models of vertical hydrologic loading predict some components of the long-wavelength horizontal signal in Northern California, but this loading accounts for only 20 - 30% of the total anomalous signal. We hypothesize that the remaining signal is associated with smaller-scale seasonal groundwater fluctuations in local basins (e.g., the Sonoma and Napa sub-basins) along with thermoelastic effects. We provide details regarding the amount of thermoelastic strain from the elastic portion of the

  20. Effect of oxalioplatin on human colorectal cancer cell line LoVo and cell subline SW480/M5%奥沙利铂对人结肠癌细胞LoVo和SW480/M5作用的实验研究

    Institute of Scientific and Technical Information of China (English)

    吕会增; 魏波; 陈图峰; 苏雁甜; 叶小勇; 陈新岐; 卫洪波

    2012-01-01

    目的 探讨体外实验奥沙利铂对人结肠癌LoVo和SW480/M5细胞的抑制作用及其可能机制.方法 MTT法检测不同剂量奥沙利铂对LoVo和SW480/M5细胞增殖的抑制作用.流式细胞仪检测1/2 GI50和GI50浓度奥沙利铂对LoVo和SW480/M5细胞周期和早期凋亡的影响.原子光谱吸收仪检测GI50浓度奥沙利铂作用4、8、24 h后LoVo和SW480/M5细胞DNA含铂量.结果 奥沙利铂对LoVo和SW480/M5细胞增殖的抑制作用呈量效依赖;其GI50浓度:LoVo细胞为6.5 mg/L,SW480/M5细胞为58.0 mg/L.自然对数增殖周期,LoVo细胞中G1期细胞比例高于、G2期细胞比例低于SW480/M5细胞(P<0.05).奥沙利铂浓度GI50时,降低肿瘤细胞G1期比例,升高LoVo细胞S期比例较SW480/M5细胞明显,升高SW480/M5细胞而降低LoVo细胞G2/M期比例.1/2 GI50、GI50奥沙利铂均可诱导两种肿瘤细胞发生早期凋亡,但1/2 GI50 L-OHP促凋亡作用两种肿瘤细胞间无统计学差异,GI50 L-OHP对LoVo细胞的促凋亡作用高于SW480/M5细胞.GI50 L-OHP奥沙利铂使两种肿瘤细胞DNA含铂量显著升高,并呈时效依赖.LoVo细胞DNA交联铂原子能力高于SW480/M5细胞.结论 奥沙利铂主要通过阻滞细胞于S期或(和)G2/M期并诱导细胞凋亡而抑制两种肿瘤细胞增殖.LoVo细胞对奥沙利铂敏感性明显高于SW480/M5细胞.

  1. Photodynamic therapy: anti-tumour potentialities of bis (tri {pi}-hexyl-siloxy) silicon phthalocyanine against malignant achromic M6 melanocytes. EPR study of the photo-toxic mechanism; Phototherapie dynamique: etude des potentialites anti-tumorales de la bis (tri {pi}-hexylsiloxy) phtalocyanine de silicium sur melanocytes malins achromiques M6. Etude RPE desmecanismes phototoxiques

    Energy Technology Data Exchange (ETDEWEB)

    Decreau, R.; Viola, A.; Julliard, M. [Faculte des Sciences Saint-Jerome, 13 - Marseille (France). Laboratoire AM3-ESA CNRS; Hadjur, Ch.; Richard, M.J.; Favier, A. [Hopital Michallon, 38 - Grenoble (France). Laboratoire de Biochimie C; Jeunet, A. [Grenoble Universite, 38 - Saint-Martin-d' Heres (France). LEDSS-UMR CNRS

    1997-07-01

    Photodynamic therapy of cancerous cells is a technique relying upon the irradiation of tumorous cells after selective incorporation of a photo-sensitizer. The bis (tri n-hexyl-siloxy) silicon phthalocyanine is a second generation photo-sensitizer. Anti-cancerous potentialities of this molecule have been evaluated against the melanotic M6 cell line. Results have evidenced a high phototoxicity at low concentration and no dark toxicity under the same conditions. EPR studies on the photochemical pathways involved in phototoxicity processes have been realised in solvent and model membranes (liposomes). Results provide evidences for the production of singlet oxygen ({sup 1}O{sub 2}) as well as superoxide (O{sub 2}{sup 0-}) and hydroxyl radical ({sup 0}OH). (authors)

  2. Shallow reflection imaging by PSDM of dense, wide-aperture data: application to the causative fault of the 1980, M6.9, southern Italy earthquake

    Science.gov (United States)

    Castiello, Antonio; Bruno, Pier Paolo; Improta, Luigi

    2010-05-01

    Shallow reflection imaging of active faults in unconsolidated deposits is a challenging task. Main factors hindering seismic imaging are the presence of steep-dipping reflectors and strong lateral velocity changes across the fault-zone, which often make standard CDP processing inappropriate. This drawback can be in principle overcome by Prestack Depth Migration (PSDM). However, performance of PSDM strongly relies on the availability of an accurate background velocity model, which is critical to account properly for the seismic wave propagation and ray-path bending in the depth domain. Such a velocity model cannot be obtained by standard seismic reflection acquisition geometries due to the small-aperture of the receiver/shot array and to the difficulty in collecting good-quality near-vertical reflection data in the very near-surface. Consequently, PSDM of shallow reflection data is very rare in the scientific literature. Recent applications of PSDM to very complex crustal structures have revealed that the use of non-conventional, dense wide-aperture acquisition geometries allows to successfully face the problem of the background velocity estimation. In this study, we investigate if the PSDM of dense, wide-aperture data can be an effective strategy for shallow imaging of complex structures, such as fault zone. We target the Irpinia Fault (IF), source of the 1980, M6.9, southern Italy normal-faulting earthquake. A 256 m long, ultrahigh resolution wide-aperture profile has been collected across the 1980 fault scarp in a small intermountain basin in the Southern Apennines range (Pantano di San Gregorio Magno). The source and receiver spacing is 3 m and 1.5 m, respectively, and the source is provided by a Buffalo gun. The survey aims at imaging the first 100 m of subsurface and at providing valuable information on the fault zone architecture below a collocated paleoseismic trench. The presence of unconsolidated deposits above a limestone basin substratum translates into

  3. Zero transmission of HIV– “Still a long way to go” An Update on TasP : PrEP and PEP of HIV infection

    OpenAIRE

    Hiremath, Ravishekar N; Kamble, Manjunath; Bhalla, Sandeep; Ghodke, Sandhya; R K Chaudhary

    2014-01-01

    AIDS emerged as one of the most important public health issues of the late twentieth and early twenty-first centuries and is now one of the leading causes of global morbidity and mortality. The AIDS epidemic has prompted wide-reaching changes in public health, clinical practice, and scientific research, and has had a great impact upon societies throughout the world. This review article gives an in site into updates on TasP (Treatment as prevention), PrEP (pre-exposure prophylaxis) and PEP (Po...

  4. Influence of the beam-size or MD-effect on particle losses at B-factories PEP-II and KEKB

    CERN Document Server

    Kotkin, G L

    2004-01-01

    For the $e^+ e^- \\to e^+ e^- \\gamma$ process at colliding beams, macroscopically large impact parameters give an essential contribution to the standard cross section. These impact parameters may be much larger than the transverse sizes of the colliding bunches. It means that the standard calculations have to be essentially modify. In the present paper such a beam-size or MD-effect is calculated for bremsstrahlung at B-factories PEP-II and KEKB using the list of nominal parameters from Review of Particle Physics (2002). We find out that this effect reduces beam losses due to bremsstrahlung by about 20%.

  5. Evaluación de accesiones de Capsicum spp. por su reacción al virus del mosaico deformante del pimentón (PepDMV

    Directory of Open Access Journals (Sweden)

    García Davalos Mario Augusto

    2010-03-01

    Full Text Available Se evaluaron 235 accesiones de Capsicum spp. procedentes del Banco de Germoplasma de la Universidad Nacional de Colombia sede Palmira en condiciones de invernadero por su reacción al Virus deformante del Pimentón (PepDMV. Solamente se identificaron 13 accesiones (5% como resistentes al virus, según la ausencia de síntomas y ausencia del virus en pruebas serológicas (PTA-ELISA y RT-PCR. Los materiales resistentes incluyen variedades de C. annuum, C. frutescens, C. chinense y C. baccatum.

  6. Evaluación de accesiones de Capsicum spp. por su reacción al virus del mosaico deformante del pimentón (PepDMV

    Directory of Open Access Journals (Sweden)

    Catherine Pardey R

    2010-01-01

    Full Text Available Se evaluaron 235 accesiones de Capsicum spp. procedentes del Banco de Germoplasma de la Universidad Nacional de Colombia sede Palmira en condiciones de invernadero por su reacción al Virus deformante del Pimentón (PepDMV. Solamente se identificaron 13 accesiones (5% como resistentes al virus, según la ausencia de síntomas y ausencia del virus en pruebas serológicas (PTA-ELISA y RT-PCR. Los materiales resistentes incluyen variedades de C. annuum, C. frutescens, C. chinense y C. baccatum.

  7. Comparison of q anti qg and q anti q. gamma. events in e/sup +/e/sup -/ annihilation at PEP

    Energy Technology Data Exchange (ETDEWEB)

    Hofmann, W.

    1986-07-01

    In comparing the particle flow in the event plane of three-jet (q anti qg) events and of radiative annihilation events (q anti q..gamma..) for similar kinematic configurations, two PEP experiments find a significant decrease in particle density in the angular region opposite to the gluon jet in q anti qg events, relative to the particle density in the region opposite to the photon in q anti q..gamma.. events. The effect is predicted both by QCD and by phenomenological string models. 5 refs., 5 figs.

  8. Effect of solar electron temperature on pep solar neutrino flux in the chlorine solar neutrino experiment and the gallium solar neutrino experiment

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    The rate of the electron-capture reaction of proton,p+e-+p→2H+ve , is calculated considering the temperature of solar electron in the solar center instead of that of solar ion. When the solar electron temperature is two times higher than the solar ion temperature in the solar center, the capture rate pep solar neutrino predicted by the standard solar model (SSM) is decreased to (0.16±0.01) SNU from (0.22±0.01) SNU in the chlorine solar neutrino experiment, and decreased to 2.19 SNU from 3.0 SNU in the gallium solar neutrino experiment.

  9. Several hPepT1-transported drugs are substrates of the Escherichia coli proton-coupled oligopeptide transporter YdgR

    DEFF Research Database (Denmark)

    Prabhala, Bala K; Aduri, Nanda G; Iqbal, Mazhar

    2017-01-01

    transported by hPepT1. The transport of these drugs was evaluated using the prototypical POT YdgR from E. coli. The transport studies were pursued through combining cell-based assays with liquid chromatography-tandem mass spectrometric (LC-MS/MS) analysis. These investigations revealed that YdgR from E. coli...... is able to transport five (sulpiride, bestatin, valacyclovir, ampicillin and oseltamivir) drugs. Furthermore, cells not overexpressing YdgR were also able to transport these drugs in a POT-like manner. Orthologues of YdgR are found in several species in the gut microbiome; hence, our findings could have...

  10. Direct CP Violation in Charmless Hadronic B-Meson Decays at the PEP-II Asymmetric B-Meson Factory

    Energy Technology Data Exchange (ETDEWEB)

    Telnov, Alexandre Valerievich; /UC, Berkeley

    2005-05-06

    The study of the quark transition b {yields} s{bar s}s, which is a pure loop-level (''penguin'') process leading to several B-meson-decay final states, most notably {phi}K, is arguably the hottest topic in B-meson physics today. The reason is the sensitivity of the amplitudes and the CP-violating asymmetries in such processes to physics beyond the Standard Model. By performing these measurements, we improve our understanding of the phenomenon of combined-parity (CP) violation, which is believed to be responsible for the dominance of matter over antimatter in our Universe. Here, we present measurements of branching fractions and charge asymmetries in the decays B{sup +} {yields} {phi}K{sup +} and B{sup 0} {yields} {phi}K{sup 0} in a sample of approximately 89 million B{bar B} pairs collected by the BABAR detector at the PEP-II asymmetric-energy B-meson Factory at SLAC. We determine {Beta}(B{sup +} {yields} {phi}K{sup +}) = (10.0{sub -0.8}{sup +0.9} {+-} 0.5) x 10{sup -6} and {Beta}(B{sup 0} {yields} {phi}K{sup 0}) = (8.4{sub -1.3}{sup +1.5} {+-} 0.5) x 10{sup -6}, where the first error is statistical and the second is systematic. Additionally, we measure the CP-violating charge asymmetry {Alpha}{sub CP}(B{sup {+-}} {yields} {phi}K{sup {+-}}) = 0.04 {+-} 0.09 {+-} 0.01, with a 90% confidence-level interval of [-0.10, 0.18], and set an upper limit on the CKM- and color-suppressed decay B{sup +} {yields} {phi}{pi}{sup +}, {Beta}(B{sup +} {yields} {phi}{pi}{sup +}) < 0.41 x 10{sup -6} (at the 90% confidence level). Our results are consistent with the Standard Model, which predicts {Alpha}{sub CP}(B{sup {+-}} {yields} {phi}K{sup {+-}}) {approx}< 1% and {Beta}(B {yields} {phi}{tau}) << 10{sup -7}. Since many models of physics beyond the Standard Model introduce additional loop diagrams with new heavy particles and new CP-violating phases that would contribute to these decays, potentially making {Alpha}{sub CP} (B{sup {+-}} {yields} {phi

  11. The Wyckoff positional order and polyhedral intergrowth in the M3B2- and M5B3-type boride precipitated in the Ni-based superalloys

    Science.gov (United States)

    Hu, X. B.; Zhu, Y. L.; Sheng, N. C.; Ma, X. L.

    2014-12-01

    Ni-based single superalloys play a crucial role in the hottest parts of jet engines. However, due to the complex geometry and macro-segregation during the solidification process, the cast defect such as stray grains is inevitable. Therefore, the transient liquid phase (TLP) bonding which can join several small single crystalline castings together is gradually believed to be an effective method for improving the yields of production of the complex components. The melting point depressant element B is always added into the interlayer filler material. Consequently, borides including the M3B2 and M5B3 phase usually precipitate during the TLP bonding process. So a comprehensive knowledge of the fine structural characteristics of the borides is very critical for an accurate evaluation of the TLP bonding process. In this work, by means of the aberration-corrected transmission electron microscopy, we show, at an atomic scale, the Wyckoff positional order phenomenon of the metal atoms in the unit cell of M3B2- and M5B3-type boride. Meanwhile, the defect along the (001) plane of the above two types of boride are determined to be the polyhedral intergrowth with complex configurations.

  12. Distance to Galactic globulars using the near-infrared magnitudes of RR Lyrae stars: IV. The case of M5 (NGC5904)

    CERN Document Server

    Coppola, G; Ripepi, V; Marconi, M; Musella, I; Bono, G; Piersimoni, A M; Stetson, P B; Storm, J

    2011-01-01

    We present new and accurate near-infrared (NIR) J, K-band time series data for the Galactic globular cluster (GC) M5 = NGC5904. Data were collected with SOFI at the NTT (71 J + 120 K images) and with NICS at the TNG (25 J + 22 K images) and cover two orthogonal strips across the center of the cluster of \\approx 5 \\times 10 arcmin^{2} each. These data allowed us to derive accurate mean K-band magnitudes for 52 fundamental (RR_{ab}) and 24 first overtone (RR_{c}) RR Lyrae stars. Using this sample of RR Lyrae stars, we find that the slope of the K-band Period Luminosity (PLK) relation (-2.33 \\pm 0.08) agrees quite well with similar estimates available in the literature. We also find, using both theoretical and empirical calibrations of the PLK relation, a true distance to M5 of (14.44 \\pm 0.02) mag. This distance modulus agrees very well (1\\sigma) with distances based on main sequence fitting method and on kinematic method (14.44 \\pm 0.41 mag, \\citealt{rees_1996}), while is systematically smaller than the distan...

  13. UBV stellar photometry of bright stars in GC M5. I. UV colour-magnitude and colour-colour diagrams and some peculiarities in the HB stellar distribution

    CERN Document Server

    Markov, H; Baev, P V; Markov, Haralambi; Spassova, Nedka; Baev, Plamen

    2001-01-01

    We present stellar photometry in the UBV passbands for the globular cluster M5 = NGC5904. The observations, short-exposured photographic plates and CCD frames, were obtained in the RC-focus of the 2m telescope of the Natl. Astron. Obs. 'Rozhen'. All stars in an annulus with radius 1 < r < 5.5 arcmin were measured. We show that the UV CMDs describe different evolutionary stages in a better manner than the 'classical' (V, B-V) diagram. We use HB stars, with known spectroscopic Teff, to check the validity of the colour zero-point. A review of all known UV-bright star candidates in M5 is made and some of their parameters are catalogued. Six new stars of this kind are suspected on the basis of their position on the CMD. New assessment of the cluster reddening and metallicity is done using the (U-B, B-V) diagram. We find [Fe/H]= -1.38, which confirms the Zinn & West (1984) value contrasting with recent spectroscopic estimates. In an effort to clarify the question of the gap in the BHB stellar distribution...

  14. Modified nucleotides m2G966/m5C967 of Escherichia coli 16S rRNA are required for attenuation of tryptophan operon

    Science.gov (United States)

    Prokhorova, Irina V.; Osterman, Ilya A.; Burakovsky, Dmitry E.; Serebryakova, Marina V.; Galyamina, Maria A.; Pobeguts, Olga V.; Altukhov, Ilya; Kovalchuk, Sergey; Alexeev, Dmitry G.; Govorun, Vadim M.; Bogdanov, Alexey A.; Sergiev, Petr V.; Dontsova, Olga A.

    2013-11-01

    Ribosomes contain a number of modifications in rRNA, the function of which is unclear. Here we show - using proteomic analysis and dual fluorescence reporter in vivo assays - that m2G966 and m5C967 in 16S rRNA of Escherichia coli ribosomes are necessary for correct attenuation of tryptophan (trp) operon. Expression of trp operon is upregulated in the strain where RsmD and RsmB methyltransferases were deleted, which results in the lack of m2G966 and m5C967 modifications. The upregulation requires the trpL attenuator, but is independent of the promotor of trp operon, ribosome binding site of the trpE gene, which follows trp attenuator and even Trp codons in the trpL sequence. Suboptimal translation initiation efficiency in the rsmB/rsmD knockout strain is likely to cause a delay in translation relative to transcription which causes misregulation of attenuation control of trp operon.

  15. Modified nucleotides m(2)G966/m(5)C967 of Escherichia coli 16S rRNA are required for attenuation of tryptophan operon.

    Science.gov (United States)

    Prokhorova, Irina V; Osterman, Ilya A; Burakovsky, Dmitry E; Serebryakova, Marina V; Galyamina, Maria A; Pobeguts, Olga V; Altukhov, Ilya; Kovalchuk, Sergey; Alexeev, Dmitry G; Govorun, Vadim M; Bogdanov, Alexey A; Sergiev, Petr V; Dontsova, Olga A

    2013-11-18

    Ribosomes contain a number of modifications in rRNA, the function of which is unclear. Here we show--using proteomic analysis and dual fluorescence reporter in vivo assays--that m(2)G966 and m(5)C967 in 16S rRNA of Escherichia coli ribosomes are necessary for correct attenuation of tryptophan (trp) operon. Expression of trp operon is upregulated in the strain where RsmD and RsmB methyltransferases were deleted, which results in the lack of m(2)G966 and m(5)C967 modifications. The upregulation requires the trpL attenuator, but is independent of the promotor of trp operon, ribosome binding site of the trpE gene, which follows trp attenuator and even Trp codons in the trpL sequence. Suboptimal translation initiation efficiency in the rsmB/rsmD knockout strain is likely to cause a delay in translation relative to transcription which causes misregulation of attenuation control of trp operon.

  16. Was the GLE on May 17, 2012 linked with the M5.1-class flare the first in the 24th solar cycle?

    CERN Document Server

    Augusto, C R A; Navia, C E; Felicio, A C S; Freire, F; Pinto, A C S; Pimentel, B; Paulista, M; Vianna, J; Fauth, C; Sinzi, T

    2013-01-01

    On May 17, 2012 an M5.1-class flare exploded from the sun. An O-type coronal mass ejection (CME) was also associated with this flare. There was an instant increase in proton flux with peak at $\\geq 100$ MeV, leading to S2 solar radiation storm level. In about 20 minutes after the X-ray emission, the solar particles reached the Earth.It was the source of the first (since December 2006) ground level enhancement (GLE) of the current solar cycle 24. The GLE was detected by neutron monitors (NM) and other ground based detectors. Here we present an observation by the Tupi muon telescopes (Niteroi, Brazil, $22^{0}.9 S$, $43^{0}.2 W$, 3 m above sea level) of the enhancement of muons at ground level associated with this M5.1-class solar flare. The Tupi telescopes registered a muon excess over background $\\sim 20\\%$ in the 5-min binning time profile. The Tupi signal is studied in correlation with data obtained by space-borne detectors (GOES, ACE), ground based neutron monitors (Oulu) and air shower detectors (the IceTo...

  17. Expression of recombinant M2 and M5 muscarinic receptors in the Sf9-baculovirus system%在Sf9昆虫细胞-杆状病毒系统中表达毒蕈碱型M2及M5受体重组突变体

    Institute of Scientific and Technical Information of China (English)

    牟男; 孙洪良; 郑建全; 王丽韫

    2011-01-01

    OBJECTIVE To study the expression of human muscarinic receptors ( M2 and M5 recombinant receptors in the baculovirus expression system.METHODS The mutation of human wild type M2 and M5 receptors was constructed by PCR or/and overlap PCR as follows: ① The putative glyeosylation residues Asp 2, 3, 6, and 9 were replaced with Asn to prevent molecular heterogeneity; ② The central part of the protease-susceptible third intracellular loop was deleted; ③ A hexa-histidine tag and a thrombin cleavage site were added at the C terminus for purification.The recombinant receptor gene was confirmed and amplified by PCR, and subcloned to baculovrius pFastBac 1 vector.Then the recombinant vector was co-transfected with the linearized virus DNA into sf9 cells by Lipofectamine.The recombinant M2 and M5 receptor protein was prepared and purified.The expression level of M2 and M5 receptors was evaluated by Western blotting, and pharmacological characteristics were confirmed by radio-legend binding assay.RESULTS The target DNA fragment of M2(1018 bp) and M5 (1041 bp) recombinant receptors was amplified by overlap PCR.The recombinant plasmid pfastbacl/M2 (M5 ) vector was successfully constructed, and transfected to Sf9.Vacuolus pathological changes were observed within cells compared to non-transfection of Sf9.The baculovirus particle protein was prepared and purified from these infected cells.The expression of M2/M5 was further confirmed by Western blotting.The specific binding character of recombinant M2/M5 receptors was detected by radio-legend binding assay.CONCLUSION The expression of M2 and M5 recombinant receptors in the baculovirus expression system will facilitate studies on new drugs from M receptor or genetic engineering.%目的 为乙酰胆碱毒蕈碱(M)受体亚型特异性的变构调节剂及基因工程的研究提供实验平台.方法 用PCR及搭桥PCR法对乙酰胆碱M2及M5受体作以下突变:①将N-糖基化位点Asp突变为Asn;②删除对蛋白酶敏

  18. Pep talk or participation

    NARCIS (Netherlands)

    Cremers, J.

    2011-01-01

    This contribution to a Conference in Oslo (on 29 and 30 August 2011) provides evidence on the role workers and their representatives can play in supporting sustainable companies. Evidence shows that, generally, management alone is not able to implement the policies needed for sustainable companies.

  19. Pep talk or participation

    NARCIS (Netherlands)

    Cremers, J.

    2011-01-01

    This contribution to a Conference in Oslo (on 29 and 30 August 2011) provides evidence on the role workers and their representatives can play in supporting sustainable companies. Evidence shows that, generally, management alone is not able to implement the policies needed for sustainable companies.

  20. Pep-Calc.com: a set of web utilities for the calculation of peptide and peptoid properties and automatic mass spectral peak assignment.

    Science.gov (United States)

    Lear, Sam; Cobb, Steven L

    2016-03-01

    The ability to calculate molecular properties such as molecular weights, isoelectric points, and extinction coefficients is vital for scientists using and/or synthesizing peptides and peptoids for research. A suite of two web utilities: Peptide Calculator and Peptoid Calculator, available free at http://www.pep-calc.com, are presented. Both tools allow the calculation of peptide/peptoid chemical formulae and molecular weight, ChemDraw structure file export and automatic assignment of mass spectral peaks to deletion sequences and metal/protecting group adducts. Peptide Calculator also provides a calculated isoelectric point, molar extinction coefficient, graphical peptide charge summary and β-strand contiguity profile (for aggregation-prone sequences), indicating potential regions of synthesis difficulty. In addition to the unique automatic spectral assignment features offered across both utilities, Peptoid Calculator represents a first-of-a-kind resource for researchers in the field of peptoid science. With a constantly expanding database of over 120 amino acids, non-natural peptide building blocks and peptoid building blocks, it is anticipated that Pep-Calc.com will act as a valuable asset to those working on the synthesis and/or application of peptides and peptoids in the biophysical and life sciences fields.

  1. Robust Control of PEP Formation Rate in the Carbon Fixation Pathway of C4 Plants by a Bi-functional Enzyme

    Directory of Open Access Journals (Sweden)

    Hart Yuval

    2011-10-01

    Full Text Available Abstract Background C4 plants such as corn and sugarcane assimilate atmospheric CO2 into biomass by means of the C4 carbon fixation pathway. We asked how PEP formation rate, a key step in the carbon fixation pathway, might work at a precise rate, regulated by light, despite fluctuations in substrate and enzyme levels constituting and regulating this process. Results We present a putative mechanism for robustness in C4 carbon fixation, involving a key enzyme in the pathway, pyruvate orthophosphate dikinase (PPDK, which is regulated by a bifunctional enzyme, Regulatory Protein (RP. The robust mechanism is based on avidity of the bifunctional enzyme RP to its multimeric substrate PPDK, and on a product-inhibition feedback loop that couples the system output to the activity of the bifunctional regulator. The model provides an explanation for several unusual biochemical characteristics of the system and predicts that the system's output, phosphoenolpyruvate (PEP formation rate, is insensitive to fluctuations in enzyme levels (PPDK and RP, substrate levels (ATP and pyruvate and the catalytic rate of PPDK, while remaining sensitive to the system's input (light levels. Conclusions The presented PPDK mechanism is a new way to achieve robustness using product inhibition as a feedback loop on a bifunctional regulatory enzyme. This mechanism exhibits robustness to protein and metabolite levels as well as to catalytic rate changes. At the same time, the output of the system remains tuned to input levels.

  2. Bile acid-regulated peroxisome proliferator-activated receptor-α (PPARα) activity underlies circadian expression of intestinal peptide absorption transporter PepT1/Slc15a1.

    Science.gov (United States)

    Okamura, Ayako; Koyanagi, Satoru; Dilxiat, Adila; Kusunose, Naoki; Chen, Jia Jun; Matsunaga, Naoya; Shibata, Shigenobu; Ohdo, Shigehiro

    2014-09-05

    Digested proteins are mainly absorbed as small peptides composed of two or three amino acids. The intestinal absorption of small peptides is mediated via only one transport system: the proton-coupled peptide transporter-1 (PepT1) encoded from the soluble carrier protein Slc15a1. In mammals, intestinal expression of PepT1/Slc15a1 oscillates during the daily feeding cycle. Although the oscillation in the intestinal expression of PepT1/Slc15a1 is suggested to be controlled by molecular components of circadian clock, we demonstrated here that bile acids regulated the oscillation of PepT1/Slc15a1 expression through modulating the activity of peroxisome proliferator-activated receptor α (PPARα). Nocturnally active mice mainly consumed their food during the dark phase. PPARα activated the intestinal expression of Slc15a1 mRNA during the light period, and protein levels of PepT1 peaked before the start of the dark phase. After food intake, bile acids accumulated in intestinal epithelial cells. Intestinal accumulated bile acids interfered with recruitment of co-transcriptional activator CREB-binding protein/p300 on the promoter region of Slc15a1 gene, thereby suppressing PPARα-mediated transactivation of Slc15a1. The time-dependent suppression of PPARα-mediated transactivation by bile acids caused an oscillation in the intestinal expression of PepT1/Slc15a1 during the daily feeding cycle that led to circadian changes in the intestinal absorption of small peptides. These findings suggest a molecular clock-independent mechanism by which bile acid-regulated PPARα activity governs the circadian expression of intestinal peptide transporter.

  3. Long-term dissemination of CTX-M-5-producing hypermutable Salmonella enterica serovar typhimurium sequence type 328 strains in Russia, Belarus, and Kazakhstan.

    Science.gov (United States)

    Kozyreva, Varvara K; Ilina, Elena N; Malakhova, Maja V; Carattoli, Alessandra; Azizov, Ilya S; Tapalski, Dmitry V; Kozlov, Roman S; Edelstein, Mikhail V

    2014-09-01

    In this paper, we present evidence of long-term circulation of cefotaxime-resistant clonally related Salmonella enterica serovar Typhimurium strains over a broad geographic area. The genetic relatedness of 88 isolates collected from multiple outbreaks and sporadic cases of nosocomial salmonellosis in various parts of Russia, Belarus, and Kazakhstan from 1996 to 2009 was established by multilocus tandem-repeat analysis (MLVA) and multilocus sequence typing (MLST). The isolates belong to sequence type 328 (ST328) and produce CTX-M-5 β-lactamase, whose gene is carried by highly related non-self-conjugative but mobilizable plasmids. Resistance to nalidixic acid and low-level resistance to ciprofloxacin is present in 37 (42%) of the isolates and in all cases is determined by various single point mutations in the gyrA gene quinolone resistance-determining region (QRDR). Isolates of the described clonal group exhibit a hypermutable phenotype that probably facilitates independent acquisition of quinolone resistance mutations.

  4. Composition dependent adsorption of multiple CO molecules on binary silver-gold clusters Ag(n)Au(m)+ (n + m = 5): theory and experiment.

    Science.gov (United States)

    Popolan, Denisia M; Nössler, Melanie; Mitrić, Roland; Bernhardt, Thorsten M; Bonacić-Koutecký, Vlasta

    2010-07-28

    The binding energies of multiple CO molecules to five-atom silver-gold cluster cations have been obtained employing temperature dependent gas phase ion trap measurements and ab initio calculations. The CO binding energies to Ag(n)Au(m)(+) (n + m = 5) decrease with increasing number of silver atoms. Most strikingly, after the adsorption of the fourth CO to Au(5)(+) and of the third CO to Ag(5)(+), respectively, a pronounced decrease in the binding energies of further CO molecules was observed. This is related to a CO-induced structural transformation yielding more compact metal cluster geometries. First principles calculations revealed that the exact structure of the carbonyl complexes with multiple CO and the nature of the CO-induced structural transformation strongly depend on the composition of the metal cluster as well as on the number of adsorbed CO molecules.

  5. DNMT3A R882 mutation is associated with elevated expression of MAFB and M4/M5 immunophenotype of acute myeloid leukemia blasts.

    Science.gov (United States)

    Yang, Li; Liu, Ya'Nan; Zhu, Li; Xiao, Min

    2015-01-01

    Researchers have recognized that aberrant methylation is an important initiating event in the pathogenesis of hematological malignancies. DNMT3A is a DNA methyltransferase that plays a vital role in de novo methylation of DNA. Somatic mutation of DNMT3A, especially at the Arg882 (R882) site of the DNMT3A coding sequence, has been identified in pre-leukemic stem cell clones as one of the driver mutations of acute myeloid leukemia (AML). Statistical analysis has indicated that patients with AML with DNMT3A mutation tend to have the M4/M5 subtype of AML according to the French-American-British classification. In this study we aimed to investigate the association between the typical immunophenotype of leukemic blasts and mutation of DNMT3A R882. In addition, we further determined the relationship between DNMT3A R882 mutation and the expression of monocytic differentiation genes, and its clinical significance.

  6. The structure of the RNA m5C methyltransferase YebU from Escherichia coli reveals a C-terminal RNA-recruiting PUA domain.

    Science.gov (United States)

    Hallberg, B Martin; Ericsson, Ulrika B; Johnson, Kenneth A; Andersen, Niels Møller; Douthwaite, Stephen; Nordlund, Pär; Beuscher, Albert E; Erlandsen, Heidi

    2006-07-21

    Nucleotide methylations are the most common type of rRNA modification in bacteria, and are introduced post-transcriptionally by a wide variety of site-specific enzymes. Three 5-methylcytidine (m(5)C) bases are found in the rRNAs of Escherichia coli and one of these, at nucleotide 1407 in 16 S rRNA, is the modification product of the methyltransferase (MTase) YebU (also called RsmF). YebU requires S-adenosyl-l-methionine (SAM) and methylates C1407 within assembled 30 S subunits, but not in naked 16 S rRNA or within tight-couple 70 S ribosomes. Here, we describe the three-dimensional structure of YebU determined by X-ray crystallography, and we present a molecular model for how YebU specifically recognizes, binds and methylates its ribosomal substrate. The YebU protein has an N-terminal SAM-binding catalytic domain with structural similarity to the equivalent domains in several other m(5)C RNA MTases including RsmB and PH1374. The C-terminal one-third of YebU contains a domain similar to that in pseudouridine synthases and archaeosine-specific transglycosylases (PUA-domain), which was not predicted by sequence alignments. Furthermore, YebU is predicted to contain extended regions of positive electrostatic potential that differ from other RNA-MTase structures, suggesting that YebU interacts with its RNA target in a different manner. Docking of YebU onto the 30 S subunit indicates that the PUA and MTase domains make several contacts with 16 S rRNA as well as with the ribosomal protein S12. The ribosomal protein interactions would explain why the assembled 30 S subunit, and not naked 16 S rRNA, is the preferred substrate for YebU.

  7. Resolving Rupture Directivity of Moderate Strike-Slip Earthquakes in Sparse Network with Ambient Noise Location: A Case Study with the 2011 M5.6 Oklahoma Earthquake

    Science.gov (United States)

    He, X.; Ni, S.

    2015-12-01

    Earthquake rupture directivity is essential for improving reliability of shakemap and understanding seismogenic processes by resolving the ruptured fault. Compared with field geological survey and InSAR technique, rupture directivity analysis based on seismological data provides rapid characterization of the rupture finiteness parameters or is almost the only way for resolving ruptured fault for earthquakes weaker than M5. In recent years, ambient seismic noise has been widely used in tomography and as well as earthquake location. Barmin et al. (2011) and Levshin et al. (2012) proposed to locate the epicenter by interpolating the estimated Green's functions (EGFs) determined by cross-correlation of ambient noise to arbitrary hypothetical event locations. This method does not rely on an earth model, but it requires a dense local array. Zhan et al. (2011) and Zeng et al. (2014) used the EGFs between a nearby station and remote stations as calibration for 3D velocity structure and then obtained the centroid location. In contrast, the hypocenter can be determined by P wave onsets. When assuming unilateral rupture, we can resolve the rupture directivity with relative location of the centroid location and hypocenter. We apply this method to the 2011 M5.6 Oklahoma earthquake. One M4.8 foreshock and one M4+ aftershock are chosen as reference event to calibrate the systematic bias of ambient noise location. The resolved rupture plane strikes southwest-northeast, consistent with the spatial distribution of aftershocks (McNamara et al., 2015) and finite fault inversion result (Sun et al., 2014). This method works for unilaterally ruptured strike-slip earthquakes, and more case studies are needed to test its effectiveness.

  8. 2003年2月14日石河子M5.4地震地形变异常及其演化分析%THE ANOMALIES OF EARTH DEFORMATION AND ITS EVOLEMENT ANALYSIS BEFORE SHIHEZI M5.4 EARTHQUAKE ON FEB.14,2003

    Institute of Scientific and Technical Information of China (English)

    杨又陵; 张翼

    2005-01-01

    分析了新疆石河子M5.4地震前震中250 km范围内定点形变的观测资料,认为从2002年5月到震前,单测项异常随时间起伏,多台异常在时间上连续发展并呈增加趋势,震前20天位于震中附近的台站出现临震突变;异常在空间呈现由西向东、由南向北,逐渐向震中区发展的态势.与1996年沙湾M5.2地震前的形变异常进行比较,认为存在较大的差异.

  9. Drilling into seismogenic zones of M2.0 - M5.5 earthquakes in deep South African gold mines (DSeis)

    Science.gov (United States)

    Ogasawara, Hiroshi; Durrheim, Raymond; Yabe, Yasuo; Ito, Takatoshi; van Aswegen, Gerrie; Cichowicz, Artur; Onstott, Tullis; Kieft, Tom; Boettcher, Margaret; Wiemer, Stefan; Ziegler, Martin; Janssen, Christoph; Shapiro, Serge; Gupta, Harsh; Dight, Phil

    2016-04-01

    Several times a year, mining-induced earthquakes with magnitudes equal to or larger than 2 take place only a few tens of meters away from active workings in South African gold mines at depths of up to 3.4 km. The largest event recorded in mining regions, a M5.5 earthquake, took place near Orkney, South Africa on 5 August 2014, with the upper edge of the activated fault being only some hundred meters below the nearest mine workings (3.0 km depth). This is one of the rare events for which detailed seismological data are available, both from surface and underground seismometers and strainmeters, allowing for a detailed seismological analysis and comparison with in-situ observed data. Therefore, this earthquake calls for drilling to investigate the seismogenic zones before aftershocks diminish. Such a project will have a significantly better spatial coverage (including nuclei of ruptures, strong motion sources, asperities, and rupture edges) than drilling in seismogenic zones of natural large earthquakes and will be possible with a lower risk and at much smaller costs. In seismogenic zones in a critical state of stress, it is difficult to delineate reliably the local spatial variation in both directions and magnitudes of principal stresses (3D full stress tensor) reliably. However, we have overcome this problem. We are able to numerically model stress better than before, enabling us to orient boreholes so that the chance of stress-induced damage during stress measurement is minimized, and enabling us to measure the full 3D stress tensor successively in a hole within reasonable time even when stresses are as large as those expected in seismogenic zones. Better recovery of cores with less stress-induced damage during drilling is also feasible. These will allow us to address key scientific questions in earthquake science and associated deep biosphere activities which have remained elusive. We held a 4-day workshop sponsored by ICDP and Ritsumeikan University in October

  10. Single-chain antibody-fragment M6P-1 possesses a mannose 6-phosphate monosaccharide-specific binding pocket that distinguishes N-glycan phosphorylation in a branch-specific manner†

    Science.gov (United States)

    Blackler, Ryan J; Evans, Dylan W; Smith, David F; Cummings, Richard D; Brooks, Cory L; Braulke, Thomas; Liu, Xinyu; Evans, Stephen V; Müller-Loennies, Sven

    2016-01-01

    The acquisition of mannose 6-phosphate (Man6P) on N-linked glycans of lysosomal enzymes is a structural requirement for their transport from the Golgi apparatus to lysosomes mediated by the mannose 6-phosphate receptors, 300 kDa cation-independent mannose 6-phosphate receptor (MPR300) and 46 kDa cation-dependent mannose 6-phosphate receptor (MPR46). Here we report that the single-chain variable domain (scFv) M6P-1 is a unique antibody fragment with specificity for Man6P monosaccharide that, through an array-screening approach against a number of phosphorylated N-glycans, is shown to bind mono- and diphosphorylated Man6 and Man7 glycans that contain terminal αMan6P(1 → 2)αMan(1 → 3)αMan. In contrast to MPR300, scFv M6P-1 does not bind phosphodiesters, monophosphorylated Man8 or mono- or diphosphorylated Man9 structures. Single crystal X-ray diffraction analysis to